FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF48179 496 604 6.29E-28 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.1E-58 T 17-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 17-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 53.442 T 17-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF52096 2 305 9.95E-66 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:1.10.1040.50 498 710 5.6E-74 T 17-10-2018 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 208 1.7E-39 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF48179 624 715 1.02E-24 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:3.90.226.10 1 312 4.6E-90 T 17-10-2018 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:3.40.50.720 314 497 6.5E-64 T 17-10-2018 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 4.9E-25 T 17-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 1.8E-5 T 17-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF51735 313 496 5.01E-55 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2640 70e381acf734b0d14da3ac5401946adb 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 17-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_2295 7cc1b9c90d39bc0786a65cfba84b8999 147 SUPERFAMILY SSF89095 1 146 5.75E-44 T 17-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 FORC55_2295 7cc1b9c90d39bc0786a65cfba84b8999 147 Gene3D G3DSA:1.10.10.410 91 147 8.7E-19 T 17-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal FORC55_2295 7cc1b9c90d39bc0786a65cfba84b8999 147 Gene3D G3DSA:1.10.1510.10 1 90 9.9E-29 T 17-10-2018 FORC55_2295 7cc1b9c90d39bc0786a65cfba84b8999 147 Pfam PF09424 Yqey-like protein 5 146 2.6E-57 T 17-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 FORC55_3305 3e45b259654a967190fa755d6b9434fd 204 PRINTS PR01021 OMPA domain signature 99 121 5.2E-12 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_3305 3e45b259654a967190fa755d6b9434fd 204 PRINTS PR01021 OMPA domain signature 129 144 5.2E-12 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_3305 3e45b259654a967190fa755d6b9434fd 204 PRINTS PR01021 OMPA domain signature 144 160 5.2E-12 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_3305 3e45b259654a967190fa755d6b9434fd 204 Pfam PF00691 OmpA family 99 193 9.9E-20 T 17-10-2018 IPR006665 OmpA-like domain FORC55_3305 3e45b259654a967190fa755d6b9434fd 204 SUPERFAMILY SSF103088 89 199 1.7E-33 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_3305 3e45b259654a967190fa755d6b9434fd 204 Gene3D G3DSA:3.30.1330.60 64 202 1.9E-34 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 SMART SM00382 34 234 6.9E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 SMART SM00382 311 502 5.2E-18 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 Pfam PF00005 ABC transporter 27 184 2.1E-26 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 526 8.3E-5 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 263 3.7E-4 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 Gene3D G3DSA:3.40.50.300 274 528 3.0E-80 T 17-10-2018 FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 Gene3D G3DSA:3.40.50.300 3 273 1.4E-81 T 17-10-2018 FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 SUPERFAMILY SSF52540 291 524 3.94E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 SUPERFAMILY SSF52540 5 256 8.59E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3223 05a4d20ffb46c9cece5afd992596ce10 530 Pfam PF00005 ABC transporter 303 453 2.6E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2736 650654c0750a125ac739607735b446fe 236 Gene3D G3DSA:3.40.50.1580 1 236 1.1E-77 T 17-10-2018 FORC55_2736 650654c0750a125ac739607735b446fe 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.095 T 17-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 FORC55_2736 650654c0750a125ac739607735b446fe 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 17-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_2736 650654c0750a125ac739607735b446fe 236 SUPERFAMILY SSF53167 3 234 8.9E-93 T 17-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 FORC55_2736 650654c0750a125ac739607735b446fe 236 Pfam PF01048 Phosphorylase superfamily 17 219 6.1E-37 T 17-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 FORC55_2736 650654c0750a125ac739607735b446fe 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.8E-112 T 17-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 FORC55_2129 342e30b476e8f463263b654548c91f6b 332 Pfam PF12224 Putative amidoligase enzyme 20 287 1.0E-64 T 17-10-2018 IPR022025 Putative amidoligase enzyme FORC55_2716 9df1809bff4f11f46caa8d62d46b2f88 244 Gene3D G3DSA:1.10.10.10 9 79 3.1E-8 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2716 9df1809bff4f11f46caa8d62d46b2f88 244 SUPERFAMILY SSF46785 10 76 3.96E-9 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2716 9df1809bff4f11f46caa8d62d46b2f88 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 4.6E-13 T 17-10-2018 IPR014757 Transcription regulator IclR, C-terminal FORC55_2716 9df1809bff4f11f46caa8d62d46b2f88 244 Gene3D G3DSA:3.30.450.40 80 240 1.3E-63 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_2716 9df1809bff4f11f46caa8d62d46b2f88 244 Pfam PF09339 IclR helix-turn-helix domain 13 61 7.2E-5 T 17-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 FORC55_2716 9df1809bff4f11f46caa8d62d46b2f88 244 SUPERFAMILY SSF55781 82 240 9.32E-32 T 17-10-2018 FORC55_0852 a3b40a70f570b7e4ffcc318bf34f4a05 237 Pfam PF00814 Glycoprotease family 30 162 3.1E-32 T 17-10-2018 IPR000905 Gcp-like domain FORC55_0852 a3b40a70f570b7e4ffcc318bf34f4a05 237 Gene3D G3DSA:3.30.420.40 96 194 1.7E-78 T 17-10-2018 FORC55_0852 a3b40a70f570b7e4ffcc318bf34f4a05 237 SUPERFAMILY SSF53067 111 223 2.72E-23 T 17-10-2018 FORC55_0852 a3b40a70f570b7e4ffcc318bf34f4a05 237 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 225 1.9E-68 T 17-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 FORC55_0852 a3b40a70f570b7e4ffcc318bf34f4a05 237 SUPERFAMILY SSF53067 4 107 1.81E-31 T 17-10-2018 FORC55_0852 a3b40a70f570b7e4ffcc318bf34f4a05 237 Gene3D G3DSA:3.30.420.40 5 228 1.7E-78 T 17-10-2018 FORC55_3202 33d496c454a911fdfb448ad1cdb60f45 387 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 302 5.9E-76 T 17-10-2018 IPR032811 Putative conjugal transfer protein TraF-related FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 Gene3D G3DSA:3.30.70.580 68 227 1.5E-53 T 17-10-2018 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 SUPERFAMILY SSF55174 8 60 8.24E-13 T 17-10-2018 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 1.9E-47 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 Pfam PF01479 S4 domain 8 52 2.0E-9 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 Gene3D G3DSA:3.10.290.10 3 61 3.2E-20 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 SUPERFAMILY SSF55120 66 227 2.64E-38 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 Gene3D G3DSA:3.30.70.1560 132 205 1.5E-53 T 17-10-2018 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 17-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 SMART SM00363 7 64 2.4E-8 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0636 36b7c7bde60db1b3e8d92a06f3d19d15 328 Pfam PF00849 RNA pseudouridylate synthase 67 193 7.6E-14 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 Gene3D G3DSA:1.10.10.10 1 88 1.4E-31 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 Pfam PF03466 LysR substrate binding domain 83 284 5.8E-32 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 8.8E-12 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 8.8E-12 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 8.8E-12 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 Gene3D G3DSA:3.40.190.10 160 264 4.9E-39 T 17-10-2018 FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 5.0E-23 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 Gene3D G3DSA:3.40.190.10 89 285 4.9E-39 T 17-10-2018 FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 SUPERFAMILY SSF46785 1 80 4.5E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1248 c66a9ea0d663e5581b7b7c18261ca860 287 SUPERFAMILY SSF53850 88 284 8.87E-26 T 17-10-2018 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 1.4E-143 T 17-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 SUPERFAMILY SSF55205 1 424 1.19E-144 T 17-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 Gene3D G3DSA:3.65.10.10 242 419 2.5E-166 T 17-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 17-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 PIRSF PIRSF000505 2 426 1.8E-157 T 17-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 2.9E-154 T 17-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 17-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.423 T 17-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 FORC55_1032 e3bcc42247c14b64159ac68fd7d38071 426 Gene3D G3DSA:3.65.10.10 20 224 2.5E-166 T 17-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 FORC55_2650 a268cff73b24e863c964123f59bd828c 154 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 8 154 4.2E-59 T 17-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 FORC55_2650 a268cff73b24e863c964123f59bd828c 154 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 136 13.324 T 17-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 FORC55_2650 a268cff73b24e863c964123f59bd828c 154 Gene3D G3DSA:1.20.5.620 60 120 4.0E-23 T 17-10-2018 FORC55_2650 a268cff73b24e863c964123f59bd828c 154 Pfam PF00430 ATP synthase B/B' CF(0) 4 135 3.5E-36 T 17-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 FORC55_2650 a268cff73b24e863c964123f59bd828c 154 SUPERFAMILY SSF81573 61 119 8.63E-15 T 17-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 Gene3D G3DSA:3.40.1190.10 91 313 7.6E-59 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 SUPERFAMILY SSF53623 96 306 2.62E-53 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 Gene3D G3DSA:3.90.190.20 314 450 3.0E-31 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 Gene3D G3DSA:3.40.50.720 1 90 1.1E-36 T 17-10-2018 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 SUPERFAMILY SSF51984 1 89 5.89E-24 T 17-10-2018 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 SUPERFAMILY SSF53244 311 448 7.33E-38 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 8.1E-276 T 17-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 361 6.5E-11 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.8E-20 T 17-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.299 T 17-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 FORC55_0340 01ad2cd7840eba1528e0438c56731c5b 451 Pfam PF08245 Mur ligase middle domain 108 291 7.3E-24 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 Gene3D G3DSA:1.10.8.260 263 323 2.3E-131 T 17-10-2018 IPR023166 HI0933-like insert domain superfamily FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 SUPERFAMILY SSF51905 1 395 1.91E-58 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 Gene3D G3DSA:3.50.50.60 8 389 2.3E-131 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 5.7E-130 T 17-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 9.8E-9 T 17-10-2018 FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 9.8E-9 T 17-10-2018 FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 9.8E-9 T 17-10-2018 FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 Gene3D G3DSA:2.40.30.10 189 340 2.3E-131 T 17-10-2018 FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 Pfam PF03486 HI0933-like protein 6 393 4.8E-157 T 17-10-2018 FORC55_0064 77954ed47fc857a3ec85938bf51ec6c2 395 SUPERFAMILY SSF160996 191 339 2.62E-42 T 17-10-2018 FORC55_2459 22d267805122cefe4a95e69e97d72560 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.717 T 17-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 FORC55_2459 22d267805122cefe4a95e69e97d72560 233 Gene3D G3DSA:3.40.50.790 68 159 7.9E-79 T 17-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich FORC55_2459 22d267805122cefe4a95e69e97d72560 233 Gene3D G3DSA:3.30.190.20 21 225 7.9E-79 T 17-10-2018 FORC55_2459 22d267805122cefe4a95e69e97d72560 233 SUPERFAMILY SSF56808 6 226 3.14E-81 T 17-10-2018 IPR023674 Ribosomal protein L1-like FORC55_2459 22d267805122cefe4a95e69e97d72560 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 6.2E-105 T 17-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 FORC55_2459 22d267805122cefe4a95e69e97d72560 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.7E-50 T 17-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein FORC55_2459 22d267805122cefe4a95e69e97d72560 233 PIRSF PIRSF002155 1 227 3.1E-77 T 17-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2459 22d267805122cefe4a95e69e97d72560 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 17-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 SUPERFAMILY SSF51905 5 378 2.98E-60 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 8.0E-21 T 17-10-2018 FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 8.0E-21 T 17-10-2018 FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 8.0E-21 T 17-10-2018 FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 8.0E-21 T 17-10-2018 FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 Gene3D G3DSA:3.50.50.60 7 332 3.5E-101 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 Pfam PF01494 FAD binding domain 6 313 9.0E-28 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 Gene3D G3DSA:3.30.9.50 82 269 3.5E-101 T 17-10-2018 FORC55_1811 1c02cd4531ae52f87dff7f34c702f106 387 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 384 4.6E-118 T 17-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Gene3D G3DSA:1.10.1030.10 404 553 1.6E-53 T 17-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Gene3D G3DSA:3.40.50.20 554 662 1.4E-49 T 17-10-2018 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 17-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 SUPERFAMILY SSF56059 128 401 5.66E-109 T 17-10-2018 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Gene3D G3DSA:3.40.50.20 1 116 3.0E-50 T 17-10-2018 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 SMART SM01096 424 547 5.0E-78 T 17-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Gene3D G3DSA:3.40.50.1380 937 1072 1.1E-33 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 SUPERFAMILY SSF52335 937 1071 3.92E-35 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.1E-64 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.1E-64 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.1E-64 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.1E-64 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.1E-64 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.1E-64 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.1E-64 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Pfam PF02142 MGS-like domain 956 1041 3.4E-17 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 SUPERFAMILY SSF52440 1 127 7.77E-50 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.9E-42 T 17-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 SUPERFAMILY SSF52440 556 675 1.73E-49 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.14 T 17-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Gene3D G3DSA:3.30.470.20 665 934 1.5E-126 T 17-10-2018 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 SUPERFAMILY SSF56059 673 932 2.12E-105 T 17-10-2018 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 SMART SM00851 955 1041 4.7E-28 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Gene3D G3DSA:3.30.470.20 119 403 2.7E-129 T 17-10-2018 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.6E-72 T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 6.9E-39 T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 SUPERFAMILY SSF48108 396 554 4.32E-53 T 17-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0484 cd3283f3b347844e0d71405189b47398 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.402 T 17-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_2190 d6611eb92d0e4504c7aac71254feedf0 330 SUPERFAMILY SSF56935 23 330 1.53E-59 T 17-10-2018 FORC55_2190 d6611eb92d0e4504c7aac71254feedf0 330 Gene3D G3DSA:2.40.160.10 22 330 4.1E-69 T 17-10-2018 IPR023614 Porin domain superfamily FORC55_2190 d6611eb92d0e4504c7aac71254feedf0 330 Pfam PF13609 Gram-negative porin 9 302 5.1E-31 T 17-10-2018 FORC55_2049 bff5ead0907047757d3c1abaabc58e70 107 Pfam PF10973 Protein of unknown function (DUF2799) 22 102 4.5E-23 T 17-10-2018 IPR021242 Protein of unknown function DUF2799 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF52540 5 211 1.44E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF54980 306 391 3.31E-16 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.30.70.870 310 594 5.1E-130 T 17-10-2018 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF50447 155 303 7.95E-33 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF54980 402 516 3.79E-27 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.7E-296 T 17-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 3.2E-57 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 5.9E-24 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.30.70.240 393 486 5.1E-130 T 17-10-2018 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:2.40.50.250 487 603 5.1E-130 T 17-10-2018 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:2.40.30.10 203 303 1.8E-33 T 17-10-2018 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF00679 Elongation factor G C-terminus 399 481 3.3E-22 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 2.4E-9 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 FORC55_0142 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.40.50.300 5 202 3.0E-68 T 17-10-2018 FORC55_1525 4d76b91084153e7098c3c00bc7928d86 357 Gene3D G3DSA:2.130.10.10 36 234 1.4E-6 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_1525 4d76b91084153e7098c3c00bc7928d86 357 Pfam PF07433 Protein of unknown function (DUF1513) 64 356 2.4E-113 T 17-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 FORC55_1525 4d76b91084153e7098c3c00bc7928d86 357 SUPERFAMILY SSF50969 57 323 3.92E-13 T 17-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like FORC55_1525 4d76b91084153e7098c3c00bc7928d86 357 PIRSF PIRSF028101 1 357 1.5E-166 T 17-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 FORC55_2024 2838767b31fb6e679735b63a563d4f13 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_2024 2838767b31fb6e679735b63a563d4f13 84 Pfam PF00037 4Fe-4S binding domain 6 25 2.5E-5 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_2024 2838767b31fb6e679735b63a563d4f13 84 Gene3D G3DSA:3.30.70.20 2 83 7.5E-34 T 17-10-2018 FORC55_2024 2838767b31fb6e679735b63a563d4f13 84 SUPERFAMILY SSF54862 5 72 3.63E-17 T 17-10-2018 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 SMART SM00863 652 695 2.4E-21 T 17-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 7.4E-18 T 17-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Gene3D G3DSA:3.30.930.10 2 251 3.5E-120 T 17-10-2018 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 SUPERFAMILY SSF50447 454 551 7.77E-19 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 SUPERFAMILY SSF55186 551 711 6.54E-53 T 17-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 SUPERFAMILY SSF55681 3 254 6.46E-109 T 17-10-2018 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 SUPERFAMILY SSF101353 255 460 3.01E-59 T 17-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Gene3D G3DSA:3.30.980.10 562 696 9.1E-52 T 17-10-2018 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.8E-223 T 17-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Pfam PF02272 DHHA1 domain 719 856 1.5E-29 T 17-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 197.859 T 17-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Gene3D G3DSA:2.40.30.130 468 551 4.8E-12 T 17-10-2018 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Gene3D G3DSA:3.30.54.20 623 676 9.1E-52 T 17-10-2018 FORC55_2269 cc4f2a4010cdcc84db3e1269270f4373 860 Gene3D G3DSA:3.10.310.40 749 857 2.1E-31 T 17-10-2018 FORC55_3441 4990749eb019eeb56c47df50886c4565 138 Gene3D G3DSA:2.60.120.10 1 115 8.6E-45 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_3441 4990749eb019eeb56c47df50886c4565 138 Pfam PF06339 Ectoine synthase 1 126 5.4E-60 T 17-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 FORC55_3441 4990749eb019eeb56c47df50886c4565 138 Hamap MF_01255 L-ectoine synthase [ectC]. 1 127 39.123 T 17-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 FORC55_3441 4990749eb019eeb56c47df50886c4565 138 SUPERFAMILY SSF51182 10 126 3.74E-22 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_3441 4990749eb019eeb56c47df50886c4565 138 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 117 1.0E-65 T 17-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 FORC55_0415 c80e58733d297db8e8f206cafff70620 324 SUPERFAMILY SSF52540 33 228 5.95E-46 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0415 c80e58733d297db8e8f206cafff70620 324 Pfam PF01926 50S ribosome-binding GTPase 33 147 1.6E-23 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0415 c80e58733d297db8e8f206cafff70620 324 Pfam PF07650 KH domain 231 308 9.7E-20 T 17-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0415 c80e58733d297db8e8f206cafff70620 324 Hamap MF_00367 GTPase Era [era]. 28 320 35.579 T 17-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0415 c80e58733d297db8e8f206cafff70620 324 Gene3D G3DSA:3.30.300.20 208 322 9.4E-42 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta FORC55_0415 c80e58733d297db8e8f206cafff70620 324 SUPERFAMILY SSF54814 204 320 1.47E-40 T 17-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 FORC55_0415 c80e58733d297db8e8f206cafff70620 324 TIGRFAM TIGR00436 era: GTP-binding protein Era 31 303 2.1E-110 T 17-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0415 c80e58733d297db8e8f206cafff70620 324 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 190 2.6E-37 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_0415 c80e58733d297db8e8f206cafff70620 324 Gene3D G3DSA:3.40.50.300 25 206 5.3E-51 T 17-10-2018 FORC55_3445 707893c185487cb49d9da722b0534091 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 13 252 1.8E-99 T 17-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 FORC55_3445 707893c185487cb49d9da722b0534091 264 SUPERFAMILY SSF56534 2 255 5.89E-98 T 17-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily FORC55_3445 707893c185487cb49d9da722b0534091 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 13 229 1.2E-47 T 17-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 FORC55_3445 707893c185487cb49d9da722b0534091 264 Gene3D G3DSA:1.10.800.10 1 263 3.8E-100 T 17-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 FORC55_3445 707893c185487cb49d9da722b0534091 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 2.3E-9 T 17-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 FORC55_3445 707893c185487cb49d9da722b0534091 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 2.3E-9 T 17-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 FORC55_3445 707893c185487cb49d9da722b0534091 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 2.3E-9 T 17-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 FORC55_3445 707893c185487cb49d9da722b0534091 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 17-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 FORC55_2893 0b8f56f5c361e99c84fd72fb0763051e 359 SMART SM00267 168 336 1.6E-45 T 17-10-2018 IPR000160 GGDEF domain FORC55_2893 0b8f56f5c361e99c84fd72fb0763051e 359 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 332 1.9E-36 T 17-10-2018 IPR000160 GGDEF domain FORC55_2893 0b8f56f5c361e99c84fd72fb0763051e 359 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 335 8.5E-41 T 17-10-2018 IPR000160 GGDEF domain FORC55_2893 0b8f56f5c361e99c84fd72fb0763051e 359 Gene3D G3DSA:3.30.70.270 165 334 2.3E-46 T 17-10-2018 FORC55_2893 0b8f56f5c361e99c84fd72fb0763051e 359 SUPERFAMILY SSF55073 184 335 8.63E-40 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0309 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0309 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0309 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0309 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0309 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 17-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0309 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 17-10-2018 FORC55_1745 f7bbb80b087ea2550732c7848990a417 365 Gene3D G3DSA:3.40.50.300 87 342 3.1E-84 T 17-10-2018 FORC55_1745 f7bbb80b087ea2550732c7848990a417 365 Hamap MF_02040 Iron-sulfur cluster carrier protein. 96 345 36.514 T 17-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein FORC55_1745 f7bbb80b087ea2550732c7848990a417 365 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 101 344 8.7E-100 T 17-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 FORC55_1745 f7bbb80b087ea2550732c7848990a417 365 SUPERFAMILY SSF52540 95 328 7.28E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1745 f7bbb80b087ea2550732c7848990a417 365 ProSitePatterns PS01215 Mrp family signature. 208 224 - T 17-10-2018 IPR000808 Mrp, conserved site GO:0005524 FORC55_2372 147e72d6be8a9406791576416b4b1aba 162 PIRSF PIRSF018472 1 162 1.2E-42 T 17-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type FORC55_2372 147e72d6be8a9406791576416b4b1aba 162 Pfam PF04093 rod shape-determining protein MreD 7 154 9.7E-45 T 17-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 FORC55_2372 147e72d6be8a9406791576416b4b1aba 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.9E-36 T 17-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 Pfam PF00701 Dihydrodipicolinate synthetase family 2 200 1.2E-77 T 17-10-2018 IPR002220 DapA-like GO:0016829 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.1E-34 T 17-10-2018 IPR002220 DapA-like GO:0016829 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.1E-34 T 17-10-2018 IPR002220 DapA-like GO:0016829 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.1E-34 T 17-10-2018 IPR002220 DapA-like GO:0016829 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.1E-34 T 17-10-2018 IPR002220 DapA-like GO:0016829 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 200 2.9E-81 T 17-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 SMART SM01130 1 201 7.7E-56 T 17-10-2018 IPR002220 DapA-like GO:0016829 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 17-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 SUPERFAMILY SSF51569 2 200 1.47E-71 T 17-10-2018 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 Gene3D G3DSA:3.20.20.70 1 201 1.8E-77 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 17-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 FORC55_0695 7083b42d94f3fe82342851d1253a7338 201 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 201 41.861 T 17-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 8.6E-80 T 17-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 Gene3D G3DSA:3.10.290.10 327 394 2.0E-16 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 SUPERFAMILY SSF52374 6 315 2.69E-97 T 17-10-2018 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 Gene3D G3DSA:3.40.50.620 5 217 1.5E-75 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.397 T 17-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 SMART SM00363 334 395 3.6E-5 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 Gene3D G3DSA:1.10.240.10 218 326 3.9E-33 T 17-10-2018 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 Pfam PF01479 S4 domain 338 372 3.6E-5 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 3.4E-129 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2192 6e19c4efcd93427e9a24cc6264b83b8f 395 SUPERFAMILY SSF55174 320 394 1.44E-15 T 17-10-2018 FORC55_2806 acdccea892c2fee2d874804a874ffbdc 153 Pfam PF05025 RbsD / FucU transport protein family 15 152 6.9E-48 T 17-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 FORC55_2806 acdccea892c2fee2d874804a874ffbdc 153 SUPERFAMILY SSF102546 15 153 4.58E-44 T 17-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 FORC55_2806 acdccea892c2fee2d874804a874ffbdc 153 Gene3D G3DSA:3.40.1650.10 22 150 2.0E-36 T 17-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 FORC55_2806 acdccea892c2fee2d874804a874ffbdc 153 Hamap MF_01661 D-ribose pyranase [rbsD]. 15 153 32.714 T 17-10-2018 IPR023064 D-ribose pyranase GO:0016872 FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 Gene3D G3DSA:1.20.120.50 1 134 5.3E-28 T 17-10-2018 IPR035938 Hemerythrin-like superfamily FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 364 7.9E-45 T 17-10-2018 IPR000160 GGDEF domain FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 SUPERFAMILY SSF47188 1 131 1.11E-26 T 17-10-2018 IPR035938 Hemerythrin-like superfamily FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 Gene3D G3DSA:3.30.70.270 191 369 1.1E-55 T 17-10-2018 FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 SUPERFAMILY SSF55073 211 368 5.34E-48 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 7.0E-51 T 17-10-2018 IPR000160 GGDEF domain FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 1.2E-29 T 17-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 SMART SM00267 195 368 7.6E-57 T 17-10-2018 IPR000160 GGDEF domain FORC55_1568 ae374003873ec8048e32f5435de79ebd 372 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 1.0E-8 T 17-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 FORC55_3318 9a712b377b2723fc45c075a310502896 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 6.8E-26 T 17-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 FORC55_3318 9a712b377b2723fc45c075a310502896 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.477 T 17-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 FORC55_3318 9a712b377b2723fc45c075a310502896 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 3.3E-90 T 17-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_3318 9a712b377b2723fc45c075a310502896 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 17-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 FORC55_3318 9a712b377b2723fc45c075a310502896 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 17-10-2018 FORC55_3318 9a712b377b2723fc45c075a310502896 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 17-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 FORC55_3318 9a712b377b2723fc45c075a310502896 829 Gene3D G3DSA:2.40.40.20 705 828 2.8E-45 T 17-10-2018 FORC55_3318 9a712b377b2723fc45c075a310502896 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 17-10-2018 FORC55_3318 9a712b377b2723fc45c075a310502896 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 17-10-2018 FORC55_3318 9a712b377b2723fc45c075a310502896 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 8.8E-17 T 17-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_3318 9a712b377b2723fc45c075a310502896 829 SUPERFAMILY SSF53706 38 699 4.19E-199 T 17-10-2018 FORC55_3318 9a712b377b2723fc45c075a310502896 829 SUPERFAMILY SSF50692 688 828 2.94E-43 T 17-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily FORC55_3318 9a712b377b2723fc45c075a310502896 829 SMART SM00926 41 95 1.9E-13 T 17-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 Pfam PF02779 Transketolase, pyrimidine binding domain 355 525 5.2E-47 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 5.4E-169 T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 SUPERFAMILY SSF52518 5 329 9.48E-121 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 664 0.0 T 17-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 Gene3D G3DSA:3.40.50.970 1 326 7.5E-133 T 17-10-2018 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 Gene3D G3DSA:3.40.50.970 327 538 1.1E-83 T 17-10-2018 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 SUPERFAMILY SSF52922 534 665 1.06E-43 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 SMART SM00861 355 526 2.7E-66 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 Pfam PF02780 Transketolase, C-terminal domain 542 656 1.1E-18 T 17-10-2018 IPR033248 Transketolase, C-terminal domain FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 Gene3D G3DSA:3.40.50.920 539 665 6.1E-44 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 17-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_2314 795e700c48fb6fb227f713511fd7f9cb 665 SUPERFAMILY SSF52518 333 527 1.29E-67 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_3686 975d5a0860def153c8027e9da71fc207 343 Gene3D G3DSA:3.40.190.10 129 337 1.9E-107 T 17-10-2018 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 SUPERFAMILY SSF53850 22 340 8.26E-89 T 17-10-2018 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 199 218 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 162 181 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 119 135 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 144 158 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 243 262 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 288 314 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 1.1E-62 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 Pfam PF13416 Bacterial extracellular solute-binding protein 39 308 2.9E-36 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_3686 975d5a0860def153c8027e9da71fc207 343 PIRSF PIRSF019574 1 343 2.7E-106 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3686 975d5a0860def153c8027e9da71fc207 343 Gene3D G3DSA:3.40.190.10 26 307 1.9E-107 T 17-10-2018 FORC55_1196 344b911e1eff8e6eccee343c7c854df3 92 Gene3D G3DSA:2.40.240.10 1 92 3.3E-34 T 17-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_1196 344b911e1eff8e6eccee343c7c854df3 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 25.839 T 17-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 FORC55_1196 344b911e1eff8e6eccee343c7c854df3 92 SUPERFAMILY SSF50715 1 92 4.53E-28 T 17-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_1196 344b911e1eff8e6eccee343c7c854df3 92 Pfam PF01386 Ribosomal L25p family 4 89 3.7E-23 T 17-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 FORC55_1196 344b911e1eff8e6eccee343c7c854df3 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 4.0E-49 T 17-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 FORC55_0267 a50069eb5cb4b2fb3db7573e1d8949c5 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 3.4E-132 T 17-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 FORC55_0267 a50069eb5cb4b2fb3db7573e1d8949c5 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 4.2E-133 T 17-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 FORC55_0267 a50069eb5cb4b2fb3db7573e1d8949c5 339 SUPERFAMILY SSF55729 1 337 1.06E-129 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0267 a50069eb5cb4b2fb3db7573e1d8949c5 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 5.5E-139 T 17-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 FORC55_0267 a50069eb5cb4b2fb3db7573e1d8949c5 339 Gene3D G3DSA:3.40.630.30 1 274 1.5E-113 T 17-10-2018 FORC55_2772 cc93f4d80707873861c8c6dda6393790 238 SUPERFAMILY SSF55811 2 156 5.21E-14 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_2772 cc93f4d80707873861c8c6dda6393790 238 Gene3D G3DSA:3.90.79.10 3 158 4.1E-22 T 17-10-2018 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.516 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 17-10-2018 IPR033135 ClpP, histidine active site FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 17-10-2018 IPR018215 ClpP, Ser active site FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 SUPERFAMILY SSF52096 23 206 1.04E-75 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 3.2E-107 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 Gene3D G3DSA:3.90.226.10 5 207 7.9E-85 T 17-10-2018 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 FORC55_0906 0294fc96570b0b367d04797b28dc27ff 208 Pfam PF00574 Clp protease 25 205 7.2E-90 T 17-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA FORC55_0456 b49f27cf4ca9c997d8e48dc366bfde29 302 Pfam PF00589 Phage integrase family 117 288 2.5E-54 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 FORC55_0456 b49f27cf4ca9c997d8e48dc366bfde29 302 SUPERFAMILY SSF56349 11 294 1.74E-57 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 FORC55_0456 b49f27cf4ca9c997d8e48dc366bfde29 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 1.5E-18 T 17-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 FORC55_0456 b49f27cf4ca9c997d8e48dc366bfde29 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 302 55.976 T 17-10-2018 IPR023009 Tyrosine recombinase XerC/XerD FORC55_0456 b49f27cf4ca9c997d8e48dc366bfde29 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 1.3E-116 T 17-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 FORC55_0456 b49f27cf4ca9c997d8e48dc366bfde29 302 Gene3D G3DSA:1.10.443.10 114 296 2.4E-73 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 FORC55_0456 b49f27cf4ca9c997d8e48dc366bfde29 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.681 T 17-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 FORC55_0456 b49f27cf4ca9c997d8e48dc366bfde29 302 Gene3D G3DSA:1.10.150.130 8 102 4.2E-23 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.0E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.0E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.0E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 SUPERFAMILY SSF52172 1 125 1.71E-29 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 SUPERFAMILY SSF46894 135 205 4.42E-20 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 Pfam PF00072 Response regulator receiver domain 4 116 3.5E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 2.7E-20 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 SMART SM00421 142 199 1.4E-20 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 Gene3D G3DSA:3.40.50.12740 2 205 5.8E-58 T 17-10-2018 FORC55_3322 23b2c9f8a3db5a1b48539277678ff068 208 SMART SM00448 2 115 6.0E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 PIRSF PIRSF000193 3 270 3.4E-77 T 17-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 Gene3D G3DSA:1.10.3730.10 165 272 1.8E-33 T 17-10-2018 FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 2.3E-26 T 17-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 SUPERFAMILY SSF48179 162 270 2.04E-29 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 Gene3D G3DSA:3.40.50.720 2 164 1.3E-53 T 17-10-2018 FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.973 T 17-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.8E-29 T 17-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 SUPERFAMILY SSF51735 4 160 1.73E-40 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 17-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 FORC55_2328 71aba33cc6db5bf3f214fa925dd6793c 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 4.7E-72 T 17-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 FORC55_2413 972249c9e0332b26ed450cb5b35f2e9b 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 12 139 1.7E-46 T 17-10-2018 IPR001602 Uncharacterised protein family UPF0047 FORC55_2413 972249c9e0332b26ed450cb5b35f2e9b 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 17-10-2018 IPR001602 Uncharacterised protein family UPF0047 FORC55_2413 972249c9e0332b26ed450cb5b35f2e9b 139 PIRSF PIRSF004681 1 139 2.4E-47 T 17-10-2018 IPR001602 Uncharacterised protein family UPF0047 FORC55_2413 972249c9e0332b26ed450cb5b35f2e9b 139 SUPERFAMILY SSF111038 1 139 5.1E-50 T 17-10-2018 IPR035917 YjbQ-like superfamily FORC55_2413 972249c9e0332b26ed450cb5b35f2e9b 139 Gene3D G3DSA:2.60.120.460 2 139 1.5E-42 T 17-10-2018 IPR035917 YjbQ-like superfamily FORC55_2413 972249c9e0332b26ed450cb5b35f2e9b 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 7.6E-39 T 17-10-2018 IPR001602 Uncharacterised protein family UPF0047 FORC55_1011 c2839ab2679169dbab274a677805425e 461 Pfam PF00875 DNA photolyase 7 163 3.4E-27 T 17-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 FORC55_1011 c2839ab2679169dbab274a677805425e 461 Gene3D G3DSA:1.10.579.10 298 428 2.4E-51 T 17-10-2018 FORC55_1011 c2839ab2679169dbab274a677805425e 461 Gene3D G3DSA:1.25.40.80 136 294 5.2E-44 T 17-10-2018 FORC55_1011 c2839ab2679169dbab274a677805425e 461 SUPERFAMILY SSF52425 3 189 4.58E-36 T 17-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 FORC55_1011 c2839ab2679169dbab274a677805425e 461 Pfam PF03441 FAD binding domain of DNA photolyase 274 418 4.1E-42 T 17-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 FORC55_1011 c2839ab2679169dbab274a677805425e 461 PRINTS PR00147 DNA photolyase signature 380 394 3.4E-12 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_1011 c2839ab2679169dbab274a677805425e 461 PRINTS PR00147 DNA photolyase signature 341 359 3.4E-12 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_1011 c2839ab2679169dbab274a677805425e 461 PRINTS PR00147 DNA photolyase signature 321 337 3.4E-12 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_1011 c2839ab2679169dbab274a677805425e 461 SUPERFAMILY SSF48173 194 420 1.44E-70 T 17-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 FORC55_1011 c2839ab2679169dbab274a677805425e 461 Gene3D G3DSA:3.40.50.620 1 135 1.1E-25 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1011 c2839ab2679169dbab274a677805425e 461 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 420 5.1E-187 T 17-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 FORC55_2218 c141bf96032a88db688d241eae052088 761 Pfam PF01734 Patatin-like phospholipase 34 225 3.4E-30 T 17-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 FORC55_2218 c141bf96032a88db688d241eae052088 761 Gene3D G3DSA:3.10.20.310 341 416 3.5E-8 T 17-10-2018 FORC55_2218 c141bf96032a88db688d241eae052088 761 SUPERFAMILY SSF52151 28 319 9.42E-58 T 17-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase FORC55_2218 c141bf96032a88db688d241eae052088 761 Pfam PF07244 Surface antigen variable number repeat 345 415 5.4E-6 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 FORC55_2218 c141bf96032a88db688d241eae052088 761 Gene3D G3DSA:3.40.1090.10 16 124 1.2E-28 T 17-10-2018 FORC55_2218 c141bf96032a88db688d241eae052088 761 Gene3D G3DSA:3.40.1090.10 132 279 1.6E-18 T 17-10-2018 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 Gene3D G3DSA:2.70.210.12 1 158 1.0E-55 T 17-10-2018 IPR036726 GTP1/OBG domain superfamily FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 6.8E-24 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 SUPERFAMILY SSF82051 2 157 2.62E-53 T 17-10-2018 IPR036726 GTP1/OBG domain superfamily FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.7E-142 T 17-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 17-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 SUPERFAMILY SSF52540 152 338 1.75E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.8E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.8E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.8E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.8E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 Pfam PF01018 GTP1/OBG 4 156 3.1E-53 T 17-10-2018 IPR006169 GTP1/OBG domain FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.254 T 17-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 PIRSF PIRSF002401 1 375 3.7E-135 T 17-10-2018 IPR035101 GTP-binding protein, Obg-type FORC55_2351 8e02381b20793fe9e94d7b5066b241b3 390 Gene3D G3DSA:3.40.50.300 159 335 2.7E-51 T 17-10-2018 FORC55_2167 80315c701d5af0b93f27008508bf78dc 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 1.6E-10 T 17-10-2018 FORC55_2167 80315c701d5af0b93f27008508bf78dc 167 Gene3D G3DSA:3.40.630.30 1 167 9.9E-48 T 17-10-2018 FORC55_2167 80315c701d5af0b93f27008508bf78dc 167 SUPERFAMILY SSF55729 1 130 1.68E-27 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 SUPERFAMILY SSF58104 312 621 6.67E-78 T 17-10-2018 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 SUPERFAMILY SSF103190 84 169 9.42E-9 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 Pfam PF00672 HAMP domain 295 341 4.5E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 486 515 2.0E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 457 484 2.0E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 2.0E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 Pfam PF02743 Cache domain 32 252 3.0E-24 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 587 7.4E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 Gene3D G3DSA:3.30.450.20 56 163 1.0E-52 T 17-10-2018 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 Gene3D G3DSA:3.30.450.20 45 263 1.0E-52 T 17-10-2018 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 SMART SM00304 287 344 8.3E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 Gene3D G3DSA:1.10.287.950 290 621 1.9E-71 T 17-10-2018 FORC55_3646 fde9205a212e42bd6107f3f5d90043b6 621 SMART SM00283 359 620 4.0E-73 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0103 a31d0a0bfe06b75224adec2c5170919d 276 Pfam PF01678 Diaminopimelate epimerase 5 125 1.4E-33 T 17-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 FORC55_0103 a31d0a0bfe06b75224adec2c5170919d 276 Pfam PF01678 Diaminopimelate epimerase 154 268 6.7E-32 T 17-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 FORC55_0103 a31d0a0bfe06b75224adec2c5170919d 276 Gene3D G3DSA:3.10.310.10 117 263 2.8E-107 T 17-10-2018 FORC55_0103 a31d0a0bfe06b75224adec2c5170919d 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 17-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 FORC55_0103 a31d0a0bfe06b75224adec2c5170919d 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.559 T 17-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 FORC55_0103 a31d0a0bfe06b75224adec2c5170919d 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.2E-102 T 17-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 FORC55_0103 a31d0a0bfe06b75224adec2c5170919d 276 Gene3D G3DSA:3.10.310.10 5 272 2.8E-107 T 17-10-2018 FORC55_0103 a31d0a0bfe06b75224adec2c5170919d 276 SUPERFAMILY SSF54506 2 274 2.04E-54 T 17-10-2018 FORC55_0729 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.5E-16 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 FORC55_0729 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.5E-16 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 FORC55_0729 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.5E-16 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 FORC55_0729 d728c15b625ed0280ddce8a398a54e33 89 PIRSF PIRSF004669 1 89 3.3E-29 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 FORC55_0729 d728c15b625ed0280ddce8a398a54e33 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 8.5E-28 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 FORC55_0729 d728c15b625ed0280ddce8a398a54e33 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.4E-34 T 17-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 Pfam PF00005 ABC transporter 304 455 7.4E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 Pfam PF00005 ABC transporter 26 185 1.6E-26 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 533 3.0E-4 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 6.4E-6 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 SUPERFAMILY SSF52540 294 526 1.11E-69 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 Gene3D G3DSA:3.40.50.300 278 538 4.5E-85 T 17-10-2018 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 Gene3D G3DSA:3.40.50.300 4 277 1.1E-84 T 17-10-2018 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 SUPERFAMILY SSF52540 6 256 7.35E-68 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 SMART SM00382 35 235 1.6E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3561 279ba0991eadad0a2026777b2fd875c8 539 SMART SM00382 312 504 3.8E-18 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3287 b9125e6fc4f31da8afd79b09977e09df 139 Pfam PF04143 Sulphur transport 3 129 1.3E-11 T 17-10-2018 IPR007272 Sulphur transport domain FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 19 87 0.004 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 190 260 1.2E-27 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 362 434 1.3E-21 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 103 171 7.8E-8 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 449 520 5.5E-21 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 275 347 8.3E-27 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 255 360 5.5E-28 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 269 357 2.9E-31 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 358 444 6.0E-24 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 88 174 6.94E-13 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 6 98 7.0E-17 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 7.1E-230 T 17-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 429 539 4.33E-24 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 4 112 1.97E-17 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 449 520 1.9E-15 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 189 260 1.9E-21 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 104 171 1.4E-7 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 275 347 7.9E-21 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 362 434 3.8E-20 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PIRSF PIRSF002111 1 534 7.5E-218 T 17-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 347 440 2.69E-21 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.4E-97 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 445 528 2.2E-20 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 99 178 3.7E-5 T 17-10-2018 FORC55_0913 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 187 268 5.6E-27 T 17-10-2018 FORC55_3505 7b2cbc53dd91292f745181cdf4c24941 259 SMART SM00382 30 219 9.7E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3505 7b2cbc53dd91292f745181cdf4c24941 259 Gene3D G3DSA:3.40.50.300 1 258 4.5E-63 T 17-10-2018 FORC55_3505 7b2cbc53dd91292f745181cdf4c24941 259 Pfam PF00005 ABC transporter 21 170 2.5E-24 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3505 7b2cbc53dd91292f745181cdf4c24941 259 SUPERFAMILY SSF52540 4 237 1.89E-50 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1993 63637309e2c84f2ad4ec526a85ebff1b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.3E-37 T 17-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 FORC55_1993 63637309e2c84f2ad4ec526a85ebff1b 107 SUPERFAMILY SSF89360 1 96 6.67E-33 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 FORC55_1993 63637309e2c84f2ad4ec526a85ebff1b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.2E-57 T 17-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 FORC55_1993 63637309e2c84f2ad4ec526a85ebff1b 107 Gene3D G3DSA:2.60.300.12 2 107 1.5E-37 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 FORC55_1993 63637309e2c84f2ad4ec526a85ebff1b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 17-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 FORC55_1993 63637309e2c84f2ad4ec526a85ebff1b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 6.9E-25 T 17-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 FORC55_0149 07e0a4b116dac8a75af444fcdfeacc01 287 Pfam PF01430 Hsp33 protein 2 268 4.8E-81 T 17-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 FORC55_0149 07e0a4b116dac8a75af444fcdfeacc01 287 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 279 31.711 T 17-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 FORC55_0149 07e0a4b116dac8a75af444fcdfeacc01 287 SUPERFAMILY SSF64397 2 227 9.94E-76 T 17-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 FORC55_0149 07e0a4b116dac8a75af444fcdfeacc01 287 Gene3D G3DSA:3.55.30.10 1 171 8.5E-63 T 17-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 FORC55_0149 07e0a4b116dac8a75af444fcdfeacc01 287 PIRSF PIRSF005261 1 278 8.2E-70 T 17-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 FORC55_0149 07e0a4b116dac8a75af444fcdfeacc01 287 Gene3D G3DSA:3.90.1280.10 221 279 5.2E-20 T 17-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 FORC55_0149 07e0a4b116dac8a75af444fcdfeacc01 287 Gene3D G3DSA:1.10.287.480 173 220 1.4E-22 T 17-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily FORC55_0149 07e0a4b116dac8a75af444fcdfeacc01 287 SUPERFAMILY SSF118352 219 277 1.26E-17 T 17-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 FORC55_2067 4fb8d05606adfb1a73aff5aaae306602 221 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.9E-33 T 17-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 FORC55_2067 4fb8d05606adfb1a73aff5aaae306602 221 Gene3D G3DSA:3.40.600.10 1 220 4.2E-54 T 17-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 FORC55_2067 4fb8d05606adfb1a73aff5aaae306602 221 SMART SM00927 53 151 1.0E-65 T 17-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 FORC55_2067 4fb8d05606adfb1a73aff5aaae306602 221 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 221 149.463 T 17-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 FORC55_2067 4fb8d05606adfb1a73aff5aaae306602 221 SUPERFAMILY SSF52980 3 220 3.22E-82 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_2067 4fb8d05606adfb1a73aff5aaae306602 221 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 1.0E-100 T 17-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 FORC55_0464 b6e5fd95fec2e59c735634cc31febcdb 316 Gene3D G3DSA:1.10.150.170 112 218 3.3E-102 T 17-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 FORC55_0464 b6e5fd95fec2e59c735634cc31febcdb 316 PIRSF PIRSF004486 1 316 7.3E-101 T 17-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 FORC55_0464 b6e5fd95fec2e59c735634cc31febcdb 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 4.1E-119 T 17-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 FORC55_0464 b6e5fd95fec2e59c735634cc31febcdb 316 Gene3D G3DSA:3.40.50.150 10 315 3.3E-102 T 17-10-2018 FORC55_0464 b6e5fd95fec2e59c735634cc31febcdb 316 SUPERFAMILY SSF81799 113 216 7.19E-31 T 17-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 FORC55_0464 b6e5fd95fec2e59c735634cc31febcdb 316 Pfam PF01795 MraW methylase family 5 315 2.5E-110 T 17-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 FORC55_0464 b6e5fd95fec2e59c735634cc31febcdb 316 SUPERFAMILY SSF53335 7 316 1.48E-44 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0464 b6e5fd95fec2e59c735634cc31febcdb 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.268 T 17-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 FORC55_2025 85ccb01189caa580a6cf759bc8d96a51 240 Pfam PF00881 Nitroreductase family 8 159 3.6E-20 T 17-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 FORC55_2025 85ccb01189caa580a6cf759bc8d96a51 240 PIRSF PIRSF005426 1 240 3.5E-81 T 17-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 FORC55_2025 85ccb01189caa580a6cf759bc8d96a51 240 SUPERFAMILY SSF55469 1 239 2.22E-72 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 FORC55_2025 85ccb01189caa580a6cf759bc8d96a51 240 Gene3D G3DSA:3.40.109.10 1 240 7.3E-73 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 FORC55_1254 149f72363f9e44ea9bc9a75f6f5f6769 273 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 273 1.4E-21 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Gene3D G3DSA:3.40.50.261 295 465 5.2E-54 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Pfam PF13380 CoA binding domain 11 136 2.0E-19 T 17-10-2018 IPR003781 CoA-binding GO:0048037 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 SUPERFAMILY SSF55729 738 878 1.59E-19 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 SUPERFAMILY SSF56059 492 706 7.28E-29 T 17-10-2018 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 290 1.3E-50 T 17-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Pfam PF00583 Acetyltransferase (GNAT) family 772 875 1.1E-7 T 17-10-2018 IPR000182 GNAT domain FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Pfam PF13549 ATP-grasp domain 489 706 2.4E-68 T 17-10-2018 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Gene3D G3DSA:3.30.1490.20 511 588 1.1E-55 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Gene3D G3DSA:3.30.470.20 493 703 1.1E-55 T 17-10-2018 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 SMART SM00881 7 102 4.8E-23 T 17-10-2018 IPR003781 CoA-binding GO:0048037 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Gene3D G3DSA:3.40.50.720 1 131 4.8E-32 T 17-10-2018 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Gene3D G3DSA:3.40.630.30 729 893 2.9E-38 T 17-10-2018 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 SUPERFAMILY SSF52210 297 457 6.8E-44 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 SUPERFAMILY SSF51735 2 140 1.35E-29 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 Gene3D G3DSA:3.40.50.261 132 293 4.6E-51 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_3209 59a0746654678054f8bbdbf641d86dac 893 SUPERFAMILY SSF52210 131 292 1.22E-37 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_2731 41d0fa63552b0b555bb5d448bf3d42e5 94 Gene3D G3DSA:3.40.630.30 2 93 3.7E-24 T 17-10-2018 FORC55_2731 41d0fa63552b0b555bb5d448bf3d42e5 94 Pfam PF14542 GCN5-related N-acetyl-transferase 15 90 2.0E-23 T 17-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase FORC55_2731 41d0fa63552b0b555bb5d448bf3d42e5 94 SUPERFAMILY SSF55729 4 90 1.03E-25 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0964 ad3f72f625ca802d053ca66c28221482 166 PIRSF PIRSF006272 1 166 1.2E-77 T 17-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU FORC55_0964 ad3f72f625ca802d053ca66c28221482 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.394 T 17-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU FORC55_0964 ad3f72f625ca802d053ca66c28221482 166 SUPERFAMILY SSF116960 1 166 1.7E-61 T 17-10-2018 FORC55_0964 ad3f72f625ca802d053ca66c28221482 166 Gene3D G3DSA:1.10.287.680 1 53 1.0E-33 T 17-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily FORC55_0964 ad3f72f625ca802d053ca66c28221482 166 Gene3D G3DSA:1.10.3190.10 54 166 8.3E-37 T 17-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily FORC55_0964 ad3f72f625ca802d053ca66c28221482 166 Pfam PF03887 YfbU domain 1 166 9.9E-69 T 17-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU FORC55_0964 ad3f72f625ca802d053ca66c28221482 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 3.0E-83 T 17-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU FORC55_3674 17e84995b8aa436137ba8612d7ed78f2 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 309 7.3E-36 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3674 17e84995b8aa436137ba8612d7ed78f2 318 SUPERFAMILY SSF161098 96 295 9.16E-15 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3674 17e84995b8aa436137ba8612d7ed78f2 318 Gene3D G3DSA:1.10.3720.10 89 304 6.4E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 Gene3D G3DSA:3.30.1370.120 189 259 1.1E-21 T 17-10-2018 IPR038591 NolW-like superfamily FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 Pfam PF03958 Bacterial type II/III secretion system short domain 267 343 8.1E-16 T 17-10-2018 IPR005644 NolW-like FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 1.9E-8 T 17-10-2018 IPR005644 NolW-like FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 7.3E-16 T 17-10-2018 IPR005644 NolW-like FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 445 469 2.2E-37 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 480 490 2.2E-37 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 593 2.2E-37 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 598 612 2.2E-37 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 2.2E-37 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 PRINTS PR01032 Gene IV protein signature 538 566 2.6E-12 T 17-10-2018 FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 PRINTS PR01032 Gene IV protein signature 591 613 2.6E-12 T 17-10-2018 FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 PRINTS PR01032 Gene IV protein signature 470 493 2.6E-12 T 17-10-2018 FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 620 1.0E-158 T 17-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 Gene3D G3DSA:3.30.1370.120 20 186 5.0E-54 T 17-10-2018 IPR038591 NolW-like superfamily FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 Pfam PF00263 Bacterial type II and III secretion system protein 449 611 2.0E-50 T 17-10-2018 IPR004846 Type II/III secretion system GO:0009306 FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 Gene3D G3DSA:3.30.1370.120 260 344 1.5E-15 T 17-10-2018 IPR038591 NolW-like superfamily FORC55_0152 fa7e84f4d5d6fc64691168a8073ee4b9 674 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 556 589 - T 17-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 SUPERFAMILY SSF58104 253 534 9.59E-58 T 17-10-2018 FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 Gene3D G3DSA:1.10.287.950 209 535 7.0E-52 T 17-10-2018 FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 Pfam PF08447 PAS fold 47 130 2.5E-14 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 SMART SM00091 24 91 4.6E-4 T 17-10-2018 IPR000014 PAS domain FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 34 129 1.6E-13 T 17-10-2018 IPR000014 PAS domain FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 SUPERFAMILY SSF55785 35 130 9.07E-26 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 501 4.4E-34 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 Gene3D G3DSA:3.30.450.20 23 167 9.6E-25 T 17-10-2018 FORC55_3304 ae5a361a5ee4f7ce480e5f4585eb0609 536 SMART SM00283 273 534 8.0E-43 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 363 374 1.7E-27 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 308 328 1.7E-27 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 342 358 1.7E-27 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 425 441 1.7E-27 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Gene3D G3DSA:3.10.170.10 198 355 9.0E-60 T 17-10-2018 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 SUPERFAMILY SSF89260 511 607 1.31E-6 T 17-10-2018 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 53 100 5.5E-12 T 17-10-2018 IPR011096 FTP domain FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 354 498 8.5E-35 T 17-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Pfam PF03413 Peptidase propeptide and YPEB domain 118 190 2.1E-9 T 17-10-2018 IPR025711 PepSY domain FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 SUPERFAMILY SSF55486 200 500 8.79E-82 T 17-10-2018 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Gene3D G3DSA:3.10.450.40 111 195 7.0E-26 T 17-10-2018 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 207 351 4.2E-35 T 17-10-2018 IPR013856 Peptidase M4 domain GO:0004222 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 529 596 3.1E-13 T 17-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Gene3D G3DSA:3.10.450.490 23 110 1.5E-7 T 17-10-2018 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Gene3D G3DSA:2.60.120.380 510 609 1.3E-38 T 17-10-2018 FORC55_3469 41444ebaf15f981e05bbad191eed64ab 609 Gene3D G3DSA:1.10.390.10 356 505 1.2E-48 T 17-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily FORC55_0978 8ee3b339f437eb0088b99595bff865f3 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 671 1.0E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0978 8ee3b339f437eb0088b99595bff865f3 706 Gene3D G3DSA:3.30.450.20 234 333 3.6E-23 T 17-10-2018 FORC55_0978 8ee3b339f437eb0088b99595bff865f3 706 Gene3D G3DSA:1.10.287.950 374 706 1.2E-68 T 17-10-2018 FORC55_0978 8ee3b339f437eb0088b99595bff865f3 706 SMART SM00283 443 704 3.8E-65 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0978 8ee3b339f437eb0088b99595bff865f3 706 SUPERFAMILY SSF58104 396 705 3.4E-70 T 17-10-2018 FORC55_0978 8ee3b339f437eb0088b99595bff865f3 706 Gene3D G3DSA:3.30.450.20 100 233 3.6E-23 T 17-10-2018 FORC55_0978 8ee3b339f437eb0088b99595bff865f3 706 SMART SM00304 374 428 2.0E-13 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0978 8ee3b339f437eb0088b99595bff865f3 706 Pfam PF00672 HAMP domain 375 424 1.1E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 Gene3D G3DSA:3.30.420.40 3 315 1.6E-132 T 17-10-2018 FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.4E-52 T 17-10-2018 IPR017861 Kae1/TsaD family FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.4E-52 T 17-10-2018 IPR017861 Kae1/TsaD family FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.4E-52 T 17-10-2018 IPR017861 Kae1/TsaD family FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.4E-52 T 17-10-2018 IPR017861 Kae1/TsaD family FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.4E-52 T 17-10-2018 IPR017861 Kae1/TsaD family FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.4E-52 T 17-10-2018 IPR017861 Kae1/TsaD family FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.532 T 17-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.7E-135 T 17-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 Gene3D G3DSA:3.30.420.40 129 293 1.6E-132 T 17-10-2018 FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 4.5E-125 T 17-10-2018 IPR017861 Kae1/TsaD family FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 SUPERFAMILY SSF53067 3 123 9.93E-31 T 17-10-2018 FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 17-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 SUPERFAMILY SSF53067 101 309 1.31E-43 T 17-10-2018 FORC55_2292 6e4d748f49824738022eda863d2b91ba 339 Pfam PF00814 Glycoprotease family 24 307 2.3E-104 T 17-10-2018 IPR000905 Gcp-like domain FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.8E-17 T 17-10-2018 FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 SUPERFAMILY SSF54909 63 148 4.83E-21 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 Gene3D G3DSA:1.10.10.10 1 56 7.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 1.6E-22 T 17-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.1E-14 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.1E-14 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.1E-14 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 SMART SM00344 3 112 5.6E-43 T 17-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 SUPERFAMILY SSF46785 2 62 2.67E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 17-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site FORC55_3645 b03cdaecab791377bcc2a868e4037350 160 Gene3D G3DSA:3.30.70.920 57 140 4.7E-26 T 17-10-2018 FORC55_3265 177ed73e6ca6dfa2c42a3971b67ae5da 431 Pfam PF00704 Glycosyl hydrolases family 18 26 417 5.6E-81 T 17-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 FORC55_3265 177ed73e6ca6dfa2c42a3971b67ae5da 431 Gene3D G3DSA:3.10.50.10 313 391 9.3E-120 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_3265 177ed73e6ca6dfa2c42a3971b67ae5da 431 SUPERFAMILY SSF51445 18 419 4.22E-79 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_3265 177ed73e6ca6dfa2c42a3971b67ae5da 431 Gene3D G3DSA:3.20.20.80 25 422 9.3E-120 T 17-10-2018 FORC55_3265 177ed73e6ca6dfa2c42a3971b67ae5da 431 ProSitePatterns PS01095 Chitinases family 18 active site. 170 178 - T 17-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 FORC55_3265 177ed73e6ca6dfa2c42a3971b67ae5da 431 SUPERFAMILY SSF54556 314 388 1.5E-17 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_3265 177ed73e6ca6dfa2c42a3971b67ae5da 431 SMART SM00636 24 417 9.7E-108 T 17-10-2018 IPR011583 Chitinase II GO:0008061 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 Gene3D G3DSA:3.30.450.40 2 175 1.1E-13 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 Gene3D G3DSA:3.40.50.300 181 364 1.9E-63 T 17-10-2018 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 SMART SM00382 214 357 7.1E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 Gene3D G3DSA:1.10.10.60 469 521 9.3E-10 T 17-10-2018 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 SMART SM00065 21 169 9.0E-5 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 SUPERFAMILY SSF52540 193 426 1.01E-68 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 Pfam PF00158 Sigma-54 interaction domain 194 360 4.6E-68 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 Gene3D G3DSA:1.10.8.60 365 429 5.4E-19 T 17-10-2018 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 SUPERFAMILY SSF55781 3 159 9.81E-16 T 17-10-2018 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 Pfam PF01590 GAF domain 23 156 4.3E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_2861 eec64a0f9b35f593fc09263f163b7759 530 SUPERFAMILY SSF46689 466 518 1.21E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0427 603c56279a08d2e59657c6c87439b907 545 Gene3D G3DSA:3.40.50.300 1 285 5.4E-134 T 17-10-2018 FORC55_0427 603c56279a08d2e59657c6c87439b907 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 3.0E-62 T 17-10-2018 IPR017926 Glutamine amidotransferase FORC55_0427 603c56279a08d2e59657c6c87439b907 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.212 T 17-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 FORC55_0427 603c56279a08d2e59657c6c87439b907 545 Pfam PF06418 CTP synthase N-terminus 5 265 1.1E-124 T 17-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 FORC55_0427 603c56279a08d2e59657c6c87439b907 545 SUPERFAMILY SSF52317 289 539 5.47E-88 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_0427 603c56279a08d2e59657c6c87439b907 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 5.3E-260 T 17-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 FORC55_0427 603c56279a08d2e59657c6c87439b907 545 SUPERFAMILY SSF52540 3 269 1.68E-121 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0427 603c56279a08d2e59657c6c87439b907 545 Gene3D G3DSA:3.40.50.880 286 543 4.7E-105 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1220 41685e2813ce798d0c60e720c9e52b39 170 Pfam PF01863 Protein of unknown function DUF45 99 152 1.9E-10 T 17-10-2018 IPR002725 Protein of unknown function DUF45 FORC55_1220 41685e2813ce798d0c60e720c9e52b39 170 Gene3D G3DSA:3.30.2010.10 85 166 1.5E-6 T 17-10-2018 FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 Gene3D G3DSA:2.130.10.10 1 188 1.0E-19 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 SUPERFAMILY SSF63829 203 392 1.96E-14 T 17-10-2018 FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 SMART SM00267 611 781 1.6E-29 T 17-10-2018 IPR000160 GGDEF domain FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 Pfam PF00990 Diguanylate cyclase, GGDEF domain 624 777 2.5E-32 T 17-10-2018 IPR000160 GGDEF domain FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 Pfam PF07494 Two component regulator propeller 277 297 0.0055 T 17-10-2018 IPR011110 Two component regulator propeller FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 Pfam PF07494 Two component regulator propeller 233 256 1.5E-4 T 17-10-2018 IPR011110 Two component regulator propeller FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 Gene3D G3DSA:2.60.40.10 454 571 1.8E-23 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 Gene3D G3DSA:3.30.70.270 607 780 1.8E-44 T 17-10-2018 FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 SUPERFAMILY SSF55073 627 779 3.77E-38 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 Pfam PF07495 Y_Y_Y domain 498 560 6.3E-18 T 17-10-2018 IPR011123 Two component regulator three Y FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 Gene3D G3DSA:2.130.10.10 190 451 1.1E-48 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_1441 c45184a24f4394fe7b27c07be2c0df45 791 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 619 780 1.0E-34 T 17-10-2018 IPR000160 GGDEF domain FORC55_2485 2e32a65d63df071a0118dc7d43ed259e 295 PIRSF PIRSF000401 1 295 1.4E-102 T 17-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 FORC55_2485 2e32a65d63df071a0118dc7d43ed259e 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.899 T 17-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 FORC55_2485 2e32a65d63df071a0118dc7d43ed259e 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 6.7E-110 T 17-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 FORC55_2485 2e32a65d63df071a0118dc7d43ed259e 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 1.8E-104 T 17-10-2018 FORC55_2485 2e32a65d63df071a0118dc7d43ed259e 295 Gene3D G3DSA:3.40.50.150 102 294 1.5E-58 T 17-10-2018 FORC55_2485 2e32a65d63df071a0118dc7d43ed259e 295 SUPERFAMILY SSF53335 43 273 8.22E-47 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2451 40c54f351780bdc1b3a82f54573d0126 212 Gene3D G3DSA:1.10.357.10 2 211 5.3E-65 T 17-10-2018 FORC55_2451 40c54f351780bdc1b3a82f54573d0126 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 4.1E-13 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2451 40c54f351780bdc1b3a82f54573d0126 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 8.3E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2451 40c54f351780bdc1b3a82f54573d0126 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 8.3E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2451 40c54f351780bdc1b3a82f54573d0126 212 SUPERFAMILY SSF46689 4 73 3.3E-16 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2451 40c54f351780bdc1b3a82f54573d0126 212 Pfam PF13972 Bacterial transcriptional repressor 58 200 3.6E-42 T 17-10-2018 IPR025722 Bacterial transcriptional repressor TetR FORC55_3616 a151580d031f2e089a913e24df08de91 278 Gene3D G3DSA:3.40.190.10 131 222 4.3E-61 T 17-10-2018 FORC55_3616 a151580d031f2e089a913e24df08de91 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 266 2.7E-49 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3616 a151580d031f2e089a913e24df08de91 278 Gene3D G3DSA:3.40.190.10 37 255 4.3E-61 T 17-10-2018 FORC55_3616 a151580d031f2e089a913e24df08de91 278 SMART SM00062 45 268 4.7E-46 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3616 a151580d031f2e089a913e24df08de91 278 SUPERFAMILY SSF53850 16 265 3.66E-57 T 17-10-2018 FORC55_0968 8ae8e5125481f23c6592687554233900 540 Gene3D G3DSA:1.10.287.950 209 525 4.7E-62 T 17-10-2018 FORC55_0968 8ae8e5125481f23c6592687554233900 540 SMART SM00304 209 263 0.0035 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0968 8ae8e5125481f23c6592687554233900 540 SUPERFAMILY SSF58104 229 539 3.01E-62 T 17-10-2018 FORC55_0968 8ae8e5125481f23c6592687554233900 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 505 6.5E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0968 8ae8e5125481f23c6592687554233900 540 SMART SM00283 278 539 2.0E-51 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 SUPERFAMILY SSF88659 168 241 1.83E-15 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 Gene3D G3DSA:1.10.601.10 8 164 1.3E-48 T 17-10-2018 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 Pfam PF04539 Sigma-70 region 3 175 248 8.4E-22 T 17-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 Pfam PF00140 Sigma-70 factor, region 1.2 57 90 2.6E-13 T 17-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 Gene3D G3DSA:1.10.10.10 168 243 2.6E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 PRINTS PR00046 Major sigma-70 factor signature 143 151 1.5E-27 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 PRINTS PR00046 Major sigma-70 factor signature 303 314 1.5E-27 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 PRINTS PR00046 Major sigma-70 factor signature 288 303 1.5E-27 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 PRINTS PR00046 Major sigma-70 factor signature 119 132 1.5E-27 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 PRINTS PR00046 Major sigma-70 factor signature 267 279 1.5E-27 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 Gene3D G3DSA:1.10.10.10 245 325 9.1E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 10 329 39.732 T 17-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 51 329 1.4E-138 T 17-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 Pfam PF04542 Sigma-70 region 2 95 164 7.0E-20 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 119 132 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 288 314 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 Pfam PF04545 Sigma-70, region 4 263 316 1.3E-17 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 91 318 5.4E-37 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 SUPERFAMILY SSF88946 57 165 5.89E-46 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_2279 8c4f091f8e217783bebec1bc17385217 335 SUPERFAMILY SSF88659 225 324 1.1E-25 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_0070 4cbaeb51e7b1070227f56fef3687ffe3 544 SUPERFAMILY SSF56112 94 436 1.19E-47 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily FORC55_0070 4cbaeb51e7b1070227f56fef3687ffe3 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 5.6E-178 T 17-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 FORC55_0070 4cbaeb51e7b1070227f56fef3687ffe3 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.689 T 17-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 FORC55_0070 4cbaeb51e7b1070227f56fef3687ffe3 544 Pfam PF03109 ABC1 family 111 230 1.9E-37 T 17-10-2018 IPR004147 UbiB domain FORC55_3376 33f79edd378a67b10e7e69ab058ef45e 83 Gene3D G3DSA:1.20.1280.290 26 75 2.1E-6 T 17-10-2018 FORC55_3376 33f79edd378a67b10e7e69ab058ef45e 83 Pfam PF10688 Bacterial inner membrane protein 4 73 1.4E-8 T 17-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV FORC55_3376 33f79edd378a67b10e7e69ab058ef45e 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 3.0E-35 T 17-10-2018 IPR020137 Uncharacterised protein family HI1736 FORC55_2082 511e7c2e4730c86eaedc315a5c4c46ac 99 Pfam PF05247 Flagellar transcriptional activator (FlhD) 5 79 4.7E-10 T 17-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 FORC55_2082 511e7c2e4730c86eaedc315a5c4c46ac 99 Gene3D G3DSA:1.10.4000.10 1 97 1.8E-11 T 17-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily FORC55_2082 511e7c2e4730c86eaedc315a5c4c46ac 99 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 78 0.007 T 17-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 FORC55_2082 511e7c2e4730c86eaedc315a5c4c46ac 99 SUPERFAMILY SSF63592 1 91 3.66E-22 T 17-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily FORC55_0590 7966a78e252e15dbffa09e5288256e3c 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.6E-72 T 17-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 FORC55_0590 7966a78e252e15dbffa09e5288256e3c 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.301 T 17-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 FORC55_0590 7966a78e252e15dbffa09e5288256e3c 149 Pfam PF03477 ATP cone domain 50 136 2.2E-16 T 17-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 FORC55_0777 b0836aa84c91d4e8cbfc068c5fd0cb56 485 Gene3D G3DSA:3.40.50.300 267 453 3.8E-57 T 17-10-2018 FORC55_0777 b0836aa84c91d4e8cbfc068c5fd0cb56 485 SMART SM00962 272 465 3.0E-64 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_0777 b0836aa84c91d4e8cbfc068c5fd0cb56 485 SUPERFAMILY SSF52540 269 460 7.87E-34 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0777 b0836aa84c91d4e8cbfc068c5fd0cb56 485 Gene3D G3DSA:1.20.120.1380 253 456 3.8E-57 T 17-10-2018 FORC55_0777 b0836aa84c91d4e8cbfc068c5fd0cb56 485 SMART SM00382 271 409 6.1E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0777 b0836aa84c91d4e8cbfc068c5fd0cb56 485 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 360 1.5E-81 T 17-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 FORC55_0777 b0836aa84c91d4e8cbfc068c5fd0cb56 485 Pfam PF00448 SRP54-type protein, GTPase domain 274 462 1.8E-38 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_0526 f87807c02c46e765393864bbf7155a24 326 SUPERFAMILY SSF56784 104 310 2.24E-48 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_0526 f87807c02c46e765393864bbf7155a24 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 4.1E-16 T 17-10-2018 FORC55_0526 f87807c02c46e765393864bbf7155a24 326 Gene3D G3DSA:1.10.150.210 115 177 7.8E-198 T 17-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 FORC55_0526 f87807c02c46e765393864bbf7155a24 326 Gene3D G3DSA:3.30.70.2020 8 322 7.8E-198 T 17-10-2018 FORC55_0526 f87807c02c46e765393864bbf7155a24 326 Gene3D G3DSA:3.40.50.1000 2 310 7.8E-198 T 17-10-2018 IPR023214 HAD superfamily FORC55_0526 f87807c02c46e765393864bbf7155a24 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 101 310 5.5E-85 T 17-10-2018 FORC55_0526 f87807c02c46e765393864bbf7155a24 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 7.7E-24 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 SUPERFAMILY SSF81593 291 440 1.02E-45 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Gene3D G3DSA:1.20.120.330 289 444 2.7E-57 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 31 948 19.518 T 17-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 SUPERFAMILY SSF81301 24 290 2.34E-89 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Gene3D G3DSA:1.20.120.1510 452 565 2.7E-32 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 280 3.8E-100 T 17-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 809 1.4E-100 T 17-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Gene3D G3DSA:3.30.460.10 115 288 2.4E-66 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 SUPERFAMILY SSF81593 821 947 6.67E-31 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Gene3D G3DSA:1.20.120.330 816 948 8.1E-43 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Pfam PF08335 GlnD PII-uridylyltransferase 845 917 5.7E-7 T 17-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Pfam PF08335 GlnD PII-uridylyltransferase 301 440 1.6E-47 T 17-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Gene3D G3DSA:1.10.4050.10 5 113 1.8E-14 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 Gene3D G3DSA:3.30.460.100 566 815 9.0E-92 T 17-10-2018 FORC55_0437 435ec570f7631445b3bc3bf944c49ac5 948 SUPERFAMILY SSF81301 529 819 8.5E-87 T 17-10-2018 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF52540 2 205 1.58E-56 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.345 T 17-10-2018 IPR006297 Elongation factor 4 GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.8E-9 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.0E-49 T 17-10-2018 IPR013842 GTP-binding protein LepA, C-terminal FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.40.50.300 1 185 1.2E-70 T 17-10-2018 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 5.4E-53 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:2.40.30.10 186 285 2.0E-35 T 17-10-2018 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF00679 Elongation factor G C-terminus 399 481 2.1E-19 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.30.70.3380 368 478 2.4E-39 T 17-10-2018 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF50447 165 288 4.32E-30 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.30.70.870 286 367 1.2E-35 T 17-10-2018 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 5.6E-17 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF54980 292 370 1.37E-18 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.6E-301 T 17-10-2018 IPR006297 Elongation factor 4 GO:0005525 FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.30.70.2570 479 553 4.3E-33 T 17-10-2018 IPR038363 LepA, C-terminal domain superfamily FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site FORC55_0412 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF54980 399 493 2.45E-24 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_2169 8755708fcc09884702bfca49e13de622 684 Gene3D G3DSA:3.30.450.20 133 210 6.0E-7 T 17-10-2018 FORC55_2169 8755708fcc09884702bfca49e13de622 684 Pfam PF13188 PAS domain 136 178 3.0E-5 T 17-10-2018 IPR000014 PAS domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 Gene3D G3DSA:3.20.20.450 424 679 8.7E-96 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2169 8755708fcc09884702bfca49e13de622 684 Pfam PF08448 PAS fold 18 122 1.8E-6 T 17-10-2018 IPR013656 PAS fold-4 FORC55_2169 8755708fcc09884702bfca49e13de622 684 Pfam PF00563 EAL domain 430 664 2.6E-73 T 17-10-2018 IPR001633 EAL domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 SUPERFAMILY SSF141868 430 677 3.79E-86 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2169 8755708fcc09884702bfca49e13de622 684 Gene3D G3DSA:3.30.450.20 19 132 4.6E-11 T 17-10-2018 FORC55_2169 8755708fcc09884702bfca49e13de622 684 Gene3D G3DSA:3.30.70.270 256 419 3.2E-51 T 17-10-2018 FORC55_2169 8755708fcc09884702bfca49e13de622 684 SUPERFAMILY SSF55785 118 203 4.0E-8 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2169 8755708fcc09884702bfca49e13de622 684 SMART SM00267 247 413 1.8E-56 T 17-10-2018 IPR000160 GGDEF domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 SMART SM00091 134 201 0.45 T 17-10-2018 IPR000014 PAS domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 SMART SM00091 11 77 1.1E-4 T 17-10-2018 IPR000014 PAS domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 123 1.0E-7 T 17-10-2018 IPR000014 PAS domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 SMART SM00052 423 669 1.6E-107 T 17-10-2018 IPR001633 EAL domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 256 409 9.6E-43 T 17-10-2018 IPR000160 GGDEF domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 410 1.9E-38 T 17-10-2018 IPR000160 GGDEF domain FORC55_2169 8755708fcc09884702bfca49e13de622 684 SUPERFAMILY SSF55785 9 118 1.83E-10 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2169 8755708fcc09884702bfca49e13de622 684 SUPERFAMILY SSF55073 261 415 6.36E-46 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0088 54f2e826e6e3b96ab803dbbb9082aa71 143 Gene3D G3DSA:3.40.630.30 3 139 2.6E-17 T 17-10-2018 FORC55_0088 54f2e826e6e3b96ab803dbbb9082aa71 143 SUPERFAMILY SSF55729 1 128 1.5E-20 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0088 54f2e826e6e3b96ab803dbbb9082aa71 143 Pfam PF00583 Acetyltransferase (GNAT) family 13 108 2.2E-9 T 17-10-2018 IPR000182 GNAT domain FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 Gene3D G3DSA:1.10.760.10 19 107 3.9E-25 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 SUPERFAMILY SSF46626 114 203 3.2E-20 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 2.2E-5 T 17-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 2.2E-5 T 17-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 SUPERFAMILY SSF46626 6 105 5.3E-21 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 Pfam PF00034 Cytochrome c 116 201 5.1E-8 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 Pfam PF00034 Cytochrome c 31 103 6.1E-10 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 Gene3D G3DSA:1.10.760.10 109 205 1.3E-26 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0091 2162633f7453fc700e36818e1c9845a5 205 PIRSF PIRSF000005 1 205 4.1E-63 T 17-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 FORC55_2493 88f2c0b692a074032d8e3efd8b891434 171 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 9.8E-64 T 17-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 FORC55_2493 88f2c0b692a074032d8e3efd8b891434 171 Pfam PF01202 Shikimate kinase 13 129 8.7E-14 T 17-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 FORC55_2493 88f2c0b692a074032d8e3efd8b891434 171 Gene3D G3DSA:3.40.50.300 2 169 2.4E-66 T 17-10-2018 FORC55_2493 88f2c0b692a074032d8e3efd8b891434 171 SUPERFAMILY SSF52540 4 168 3.22E-26 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 Gene3D G3DSA:3.30.70.80 45 130 2.9E-17 T 17-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 211 221 - T 17-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 Pfam PF00082 Subtilase family 169 398 6.5E-37 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 Gene3D G3DSA:2.60.120.380 439 538 1.1E-27 T 17-10-2018 FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 SUPERFAMILY SSF52743 145 404 3.4E-83 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 Gene3D G3DSA:3.40.50.200 142 427 2.3E-100 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 460 524 8.0E-11 T 17-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 362 372 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 Pfam PF05922 Peptidase inhibitor I9 52 128 2.4E-11 T 17-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 PRINTS PR00723 Subtilisin serine protease family (S8) signature 169 188 2.2E-19 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 PRINTS PR00723 Subtilisin serine protease family (S8) signature 361 377 2.2E-19 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 2.2E-19 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 174 185 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site FORC55_0131 0450d019c43d4b8f7be7ec742d9d0296 538 SUPERFAMILY SSF54897 50 130 9.64E-13 T 17-10-2018 FORC55_2902 c0e13557c7daa10102867101ab7c95d1 303 Gene3D G3DSA:3.40.50.1980 171 274 6.8E-106 T 17-10-2018 FORC55_2902 c0e13557c7daa10102867101ab7c95d1 303 Gene3D G3DSA:3.40.50.1980 25 280 6.8E-106 T 17-10-2018 FORC55_2902 c0e13557c7daa10102867101ab7c95d1 303 Pfam PF01497 Periplasmic binding protein 41 275 1.9E-23 T 17-10-2018 IPR002491 ABC transporter periplasmic binding domain FORC55_2902 c0e13557c7daa10102867101ab7c95d1 303 SUPERFAMILY SSF53807 16 281 3.45E-59 T 17-10-2018 FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 2.7E-9 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 88 190 7.7E-13 T 17-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 34.919 T 17-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 SUPERFAMILY SSF56784 3 222 1.31E-59 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 220 2.3E-59 T 17-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 Gene3D G3DSA:1.10.150.240 19 92 7.8E-64 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 192 3.1E-12 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 Gene3D G3DSA:3.40.50.1000 7 214 7.8E-64 T 17-10-2018 IPR023214 HAD superfamily FORC55_0260 e6a44b9cec57efc8ccf78c5899fbd01f 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 4.5E-38 T 17-10-2018 FORC55_0756 0419fff70ad51b913328021604811de3 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 17-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0756 0419fff70ad51b913328021604811de3 130 SUPERFAMILY SSF81343 8 130 1.96E-34 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0756 0419fff70ad51b913328021604811de3 130 Gene3D G3DSA:1.20.1300.10 5 130 2.1E-44 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0756 0419fff70ad51b913328021604811de3 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 1.0E-29 T 17-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0756 0419fff70ad51b913328021604811de3 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 17-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0756 0419fff70ad51b913328021604811de3 130 PIRSF PIRSF000178 2 130 2.6E-32 T 17-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0756 0419fff70ad51b913328021604811de3 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 4.7E-40 T 17-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_1624 591383eb29dbeee3290798898c14c274 364 Gene3D G3DSA:3.40.640.10 21 261 3.9E-87 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1624 591383eb29dbeee3290798898c14c274 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 5.0E-161 T 17-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 FORC55_1624 591383eb29dbeee3290798898c14c274 364 SUPERFAMILY SSF53383 8 361 1.66E-113 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1624 591383eb29dbeee3290798898c14c274 364 PIRSF PIRSF000525 2 364 4.3E-153 T 17-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 FORC55_1624 591383eb29dbeee3290798898c14c274 364 Pfam PF00266 Aminotransferase class-V 8 352 2.5E-62 T 17-10-2018 IPR000192 Aminotransferase class V domain FORC55_1624 591383eb29dbeee3290798898c14c274 364 Gene3D G3DSA:3.90.1150.10 262 364 3.9E-41 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1624 591383eb29dbeee3290798898c14c274 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 51.511 T 17-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 FORC55_2883 a9707597a40089509867ec86a616f7b1 442 PIRSF PIRSF004539 1 441 5.6E-182 T 17-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 FORC55_2883 a9707597a40089509867ec86a616f7b1 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 2.8E-146 T 17-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 FORC55_2883 a9707597a40089509867ec86a616f7b1 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 8.7E-149 T 17-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 FORC55_0814 c6be605f6c0b0c5e0cd7014ecfde4e4c 1049 Gene3D G3DSA:2.40.50.140 29 122 4.4E-32 T 17-10-2018 FORC55_0814 c6be605f6c0b0c5e0cd7014ecfde4e4c 1049 Pfam PF00575 S1 RNA binding domain 34 115 4.6E-14 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0814 c6be605f6c0b0c5e0cd7014ecfde4e4c 1049 Gene3D G3DSA:3.40.1260.20 397 505 2.5E-40 T 17-10-2018 FORC55_0814 c6be605f6c0b0c5e0cd7014ecfde4e4c 1049 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 4.0E-171 T 17-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 FORC55_0814 c6be605f6c0b0c5e0cd7014ecfde4e4c 1049 Hamap MF_00970 Ribonuclease E [rne]. 1 1036 35.644 T 17-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 FORC55_0814 c6be605f6c0b0c5e0cd7014ecfde4e4c 1049 Pfam PF10150 Ribonuclease E/G family 118 387 2.0E-94 T 17-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 FORC55_0814 c6be605f6c0b0c5e0cd7014ecfde4e4c 1049 SUPERFAMILY SSF50249 37 121 9.65E-20 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0814 c6be605f6c0b0c5e0cd7014ecfde4e4c 1049 SMART SM00316 34 116 3.9E-11 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 Gene3D G3DSA:3.40.50.300 1 176 1.6E-59 T 17-10-2018 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 Gene3D G3DSA:1.10.10.60 268 327 1.0E-5 T 17-10-2018 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 308 328 3.7E-5 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 308 3.7E-5 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 325 2.0E-163 T 17-10-2018 IPR014317 Transcription activator PspF FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 Pfam PF02954 Bacterial regulatory protein, Fis family 291 325 1.3E-6 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 SMART SM00382 25 177 4.8E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 Gene3D G3DSA:1.10.8.60 177 261 7.9E-27 T 17-10-2018 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 SUPERFAMILY SSF46689 219 325 1.79E-6 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 SUPERFAMILY SSF52540 5 237 3.96E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1158 58fa2b074afc2fb360101462a72b7e44 338 Pfam PF00158 Sigma-54 interaction domain 5 168 1.1E-58 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_2053 1fb926c180c1a0f3f85d1fe784f68cff 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 1.7E-18 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 FORC55_2053 1fb926c180c1a0f3f85d1fe784f68cff 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 1.7E-18 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 FORC55_2053 1fb926c180c1a0f3f85d1fe784f68cff 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 1.7E-18 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 FORC55_2053 1fb926c180c1a0f3f85d1fe784f68cff 171 TIGRFAM TIGR00077 lspA: signal peptidase II 8 166 4.5E-50 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 FORC55_2053 1fb926c180c1a0f3f85d1fe784f68cff 171 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 FORC55_2053 1fb926c180c1a0f3f85d1fe784f68cff 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 17.037 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 FORC55_2053 1fb926c180c1a0f3f85d1fe784f68cff 171 Pfam PF01252 Signal peptidase (SPase) II 19 161 4.9E-38 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 FORC55_3631 e75c5d94cb06bc29cabcc84bdd2618c6 131 SUPERFAMILY SSF52821 27 130 8.77E-22 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_3631 e75c5d94cb06bc29cabcc84bdd2618c6 131 SMART SM00450 29 127 1.7E-9 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3631 e75c5d94cb06bc29cabcc84bdd2618c6 131 Pfam PF00581 Rhodanese-like domain 40 122 2.1E-9 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3631 e75c5d94cb06bc29cabcc84bdd2618c6 131 Gene3D G3DSA:3.40.250.10 11 128 8.4E-25 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_2441 bda62419c1d2b9da502ccd2bb935261a 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.3E-51 T 17-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 FORC55_2441 bda62419c1d2b9da502ccd2bb935261a 154 SUPERFAMILY SSF52540 27 133 8.11E-24 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2441 bda62419c1d2b9da502ccd2bb935261a 154 Gene3D G3DSA:3.40.50.300 2 152 3.5E-47 T 17-10-2018 FORC55_2441 bda62419c1d2b9da502ccd2bb935261a 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.1E-41 T 17-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 17-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.40.50.720 14 312 1.2E-112 T 17-10-2018 FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF55021 335 408 3.28E-18 T 17-10-2018 FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 17-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.30.70.260 328 408 2.4E-33 T 17-10-2018 FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 17-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.1E-38 T 17-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF52283 7 136 3.59E-49 T 17-10-2018 FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF51735 108 295 4.21E-60 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.7E-54 T 17-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 FORC55_0396 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.40.50.720 109 297 1.2E-112 T 17-10-2018 FORC55_2137 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_3128 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_2671 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_2097 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_3056 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_1930 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_3163 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_3059 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_2802 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_2117 570ca0edf39ad0d3a1659997c6bb5ece 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.7E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 Gene3D G3DSA:1.20.1330.10 44 327 1.1E-74 T 17-10-2018 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF07196 Flagellin hook IN motif 201 245 3.3E-10 T 17-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.3E-40 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-24 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 76 95 6.4E-25 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 37 54 6.4E-25 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 111 134 6.4E-25 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 SUPERFAMILY SSF64518 1 377 9.42E-93 T 17-10-2018 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 Gene3D G3DSA:3.30.70.2120 172 275 1.1E-74 T 17-10-2018 FORC55_0707 442b570493db4e2575d2a55fb3652b2d 378 Gene3D G3DSA:1.10.8.410 328 377 1.9E-19 T 17-10-2018 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:3.30.300.180 2 114 6.4E-42 T 17-10-2018 IPR038454 DnaA, N-terminal domain superfamily FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.634 T 17-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.8E-32 T 17-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF00308 Bacterial dnaA protein 133 349 2.6E-98 T 17-10-2018 IPR013317 Chromosomal replication initiator protein DnaA FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF11638 DnaA N-terminal domain 4 64 3.0E-19 T 17-10-2018 IPR024633 DnaA N-terminal domain FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:1.10.1750.10 374 467 1.4E-39 T 17-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:3.40.50.300 117 296 2.9E-49 T 17-10-2018 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 SMART SM00760 375 444 3.4E-45 T 17-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 7.4E-187 T 17-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:1.10.8.60 298 368 1.5E-25 T 17-10-2018 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 SUPERFAMILY SSF52540 132 343 7.91E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 SMART SM00382 164 377 4.5E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 17-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 FORC55_0001 60f800a7e00eb6923501cc5f30be16ae 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 17-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 PIRSF PIRSF001499 1 374 7.3E-176 T 17-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 Pfam PF01817 Chorismate mutase type II 9 87 1.8E-20 T 17-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 SUPERFAMILY SSF48600 4 88 2.38E-23 T 17-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 Gene3D G3DSA:1.10.3660.10 248 373 4.5E-48 T 17-10-2018 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 SMART SM00830 9 89 9.7E-29 T 17-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 Pfam PF02153 Prephenate dehydrogenase 134 343 3.3E-31 T 17-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.3E-41 T 17-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 SUPERFAMILY SSF51735 91 237 1.54E-37 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 Gene3D G3DSA:1.20.59.10 1 80 5.5E-17 T 17-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 Gene3D G3DSA:3.40.50.720 81 246 8.3E-44 T 17-10-2018 FORC55_2041 68f95a123463ff98c3389224f452c8f4 375 SUPERFAMILY SSF48179 241 366 1.81E-41 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 530 5.1E-14 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 SUPERFAMILY SSF158472 176 223 1.16E-6 T 17-10-2018 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 Gene3D G3DSA:1.20.1480.50 141 232 6.5E-11 T 17-10-2018 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 Gene3D G3DSA:3.30.565.10 392 533 5.0E-27 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 Pfam PF00672 HAMP domain 175 223 3.4E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 SMART SM00304 174 226 3.2E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 7.6E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 7.6E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 7.6E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 7.6E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 Gene3D G3DSA:1.10.287.130 257 375 3.2E-15 T 17-10-2018 FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 SMART SM00387 420 531 4.0E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1694 a8edf47ad0f0f3ff0606c49d59eb2333 534 SUPERFAMILY SSF55874 382 531 8.64E-30 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 Pfam PF00549 CoA-ligase 151 270 2.9E-21 T 17-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 Gene3D G3DSA:3.40.50.720 1 123 1.2E-51 T 17-10-2018 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 1.8E-145 T 17-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.242 T 17-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 17-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 17-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 SUPERFAMILY SSF52210 123 286 1.14E-56 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 SUPERFAMILY SSF51735 1 122 2.89E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 SMART SM00881 4 100 3.0E-36 T 17-10-2018 IPR003781 CoA-binding GO:0048037 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.4E-40 T 17-10-2018 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.4E-40 T 17-10-2018 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.4E-40 T 17-10-2018 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.4E-40 T 17-10-2018 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 Pfam PF02629 CoA binding domain 6 99 1.9E-31 T 17-10-2018 IPR003781 CoA-binding GO:0048037 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 PIRSF PIRSF001553 1 289 3.4E-134 T 17-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0763 34aa025251a1814f6e3bdb72e7354ea6 290 Gene3D G3DSA:3.40.50.261 124 288 9.0E-76 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 Gene3D G3DSA:1.10.8.60 318 426 5.1E-41 T 17-10-2018 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 SMART SM00382 113 266 2.0E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 SMART SM00994 13 52 1.0E-24 T 17-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 17-10-2018 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 SUPERFAMILY SSF52540 65 404 6.51E-72 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.301 T 17-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 Gene3D G3DSA:3.30.50.30 2 53 2.7E-26 T 17-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.2E-15 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 Gene3D G3DSA:3.40.50.300 59 317 5.7E-109 T 17-10-2018 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 6.5E-49 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 17-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 2.4E-210 T 17-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 FORC55_0907 117ce498a6a772a2cdf333020b2ceff3 426 SMART SM01086 319 414 9.0E-33 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Gene3D G3DSA:3.90.105.10 226 374 1.4E-139 T 17-10-2018 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 17 149 6.0E-47 T 17-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 SUPERFAMILY SSF63882 205 375 9.55E-50 T 17-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Gene3D G3DSA:2.20.25.120 60 92 2.0E-56 T 17-10-2018 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Pfam PF03454 MoeA C-terminal region (domain IV) 531 602 3.4E-20 T 17-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 PIRSF PIRSF036618 2 606 0.0 T 17-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 17 172 1.4E-41 T 17-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Pfam PF00994 Probable molybdopterin binding domain 380 517 2.5E-27 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 SUPERFAMILY SSF52540 15 175 1.49E-24 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 377 513 8.7E-33 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Gene3D G3DSA:3.40.50.300 17 171 2.0E-56 T 17-10-2018 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 SUPERFAMILY SSF53218 377 522 9.42E-45 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Gene3D G3DSA:3.40.980.10 225 526 1.4E-139 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Pfam PF03453 MoeA N-terminal region (domain I and II) 208 367 5.5E-43 T 17-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 453 486 - T 17-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 SMART SM00852 380 517 8.6E-42 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Gene3D G3DSA:2.40.340.10 527 597 1.4E-139 T 17-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 Gene3D G3DSA:2.170.190.11 250 341 1.4E-139 T 17-10-2018 FORC55_1297 373390dd431b65e5ebfc0a02630cefe8 606 SUPERFAMILY SSF63867 526 604 4.58E-22 T 17-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 321 3.4E-105 T 17-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 300 1.2E-9 T 17-10-2018 IPR010918 PurM-like, C-terminal domain FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 PIRSF PIRSF005303 1 321 4.3E-85 T 17-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 SUPERFAMILY SSF55326 4 138 2.88E-33 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 Gene3D G3DSA:3.90.650.10 145 322 4.8E-50 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 Gene3D G3DSA:3.30.1330.10 2 144 1.6E-42 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 321 27.778 T 17-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 2.0E-21 T 17-10-2018 IPR016188 PurM-like, N-terminal domain FORC55_0596 9ae0a50a687a153a61dd896e9387bee9 325 SUPERFAMILY SSF56042 143 302 1.64E-34 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily FORC55_2968 f3b3f8c25ad2a24c331a4208cae8216d 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 211 1.8E-23 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_2968 f3b3f8c25ad2a24c331a4208cae8216d 216 SMART SM00862 140 211 5.7E-24 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_2968 f3b3f8c25ad2a24c331a4208cae8216d 216 SUPERFAMILY SSF52172 1 168 2.13E-25 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2968 f3b3f8c25ad2a24c331a4208cae8216d 216 Pfam PF00072 Response regulator receiver domain 4 111 6.6E-16 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2968 f3b3f8c25ad2a24c331a4208cae8216d 216 Gene3D G3DSA:3.40.50.2300 1 118 1.5E-27 T 17-10-2018 FORC55_2968 f3b3f8c25ad2a24c331a4208cae8216d 216 SUPERFAMILY SSF46894 117 211 2.81E-28 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_2968 f3b3f8c25ad2a24c331a4208cae8216d 216 SMART SM00448 2 110 4.6E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2968 f3b3f8c25ad2a24c331a4208cae8216d 216 Gene3D G3DSA:1.10.10.10 119 213 8.1E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2174 73a53b44f4a4cf7e445b5956338fd2f0 270 PIRSF PIRSF004654 1 261 9.9E-87 T 17-10-2018 IPR023605 Lipoprotein NlpI FORC55_2174 73a53b44f4a4cf7e445b5956338fd2f0 270 Pfam PF13181 Tetratricopeptide repeat 68 100 0.2 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2174 73a53b44f4a4cf7e445b5956338fd2f0 270 Gene3D G3DSA:1.25.40.10 1 263 6.6E-81 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2174 73a53b44f4a4cf7e445b5956338fd2f0 270 SUPERFAMILY SSF48452 1 253 4.75E-67 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2174 73a53b44f4a4cf7e445b5956338fd2f0 270 SMART SM00028 67 100 5.2E-4 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2174 73a53b44f4a4cf7e445b5956338fd2f0 270 SMART SM00028 33 66 0.78 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2174 73a53b44f4a4cf7e445b5956338fd2f0 270 SMART SM00028 204 237 38.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2174 73a53b44f4a4cf7e445b5956338fd2f0 270 SMART SM00028 101 134 120.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0558 acdee9f84c62e7ee8dcfb2a66badafc5 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 258 281 1.5E-7 T 17-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 FORC55_0558 acdee9f84c62e7ee8dcfb2a66badafc5 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 1.5E-7 T 17-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 FORC55_0558 acdee9f84c62e7ee8dcfb2a66badafc5 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 1.5E-7 T 17-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 FORC55_0558 acdee9f84c62e7ee8dcfb2a66badafc5 282 Gene3D G3DSA:2.40.230.20 23 282 1.5E-67 T 17-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 FORC55_0558 acdee9f84c62e7ee8dcfb2a66badafc5 282 SUPERFAMILY SSF111364 30 282 4.84E-77 T 17-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 FORC55_0558 acdee9f84c62e7ee8dcfb2a66badafc5 282 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 281 6.4E-93 T 17-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 Gene3D G3DSA:3.50.50.60 144 259 3.9E-85 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 SUPERFAMILY SSF51905 169 323 1.1E-18 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 437 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 253 267 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 395 410 2.0E-42 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 5.8E-41 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PIRSF PIRSF000350 1 462 4.8E-59 T 17-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 Gene3D G3DSA:3.50.50.60 6 320 3.9E-85 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 Gene3D G3DSA:1.10.287.990 36 106 3.9E-85 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.0E-19 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 268 1.0E-19 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.0E-19 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 1.0E-19 T 17-10-2018 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 442 3.6E-13 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 Gene3D G3DSA:3.30.390.30 336 452 3.6E-36 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 SUPERFAMILY SSF51905 3 221 1.47E-35 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2126 11805adc2a898e0fc55883ec95aa78d9 469 SUPERFAMILY SSF55424 340 445 1.13E-21 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 Pfam PF01235 Sodium:alanine symporter family 28 432 2.3E-163 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 PRINTS PR00175 Sodium/alanine symporter signature 67 89 8.6E-59 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 PRINTS PR00175 Sodium/alanine symporter signature 186 205 8.6E-59 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 PRINTS PR00175 Sodium/alanine symporter signature 158 176 8.6E-59 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 PRINTS PR00175 Sodium/alanine symporter signature 329 351 8.6E-59 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 PRINTS PR00175 Sodium/alanine symporter signature 283 301 8.6E-59 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 PRINTS PR00175 Sodium/alanine symporter signature 390 410 8.6E-59 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 67 82 - T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0516 900528f950efd9c252842b26e54a4d18 456 TIGRFAM TIGR00835 agcS: amino acid carrier protein 1 421 1.3E-161 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_2032 a70916e3f52be44f9a40c292ee331f9c 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 5.8E-22 T 17-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 FORC55_2032 a70916e3f52be44f9a40c292ee331f9c 108 SUPERFAMILY SSF69754 1 104 8.63E-30 T 17-10-2018 IPR036567 Ribosome hibernation promotion factor-like FORC55_2032 a70916e3f52be44f9a40c292ee331f9c 108 Gene3D G3DSA:3.30.160.100 1 106 4.1E-33 T 17-10-2018 IPR036567 Ribosome hibernation promotion factor-like FORC55_2032 a70916e3f52be44f9a40c292ee331f9c 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 2.5E-30 T 17-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 FORC55_0349 51c5b8744754be5738ed427c93c0a074 286 Pfam PF03668 P-loop ATPase protein family 1 284 4.8E-112 T 17-10-2018 IPR005337 RapZ-like family GO:0005524 FORC55_0349 51c5b8744754be5738ed427c93c0a074 286 PIRSF PIRSF005052 1 286 2.2E-107 T 17-10-2018 IPR005337 RapZ-like family GO:0005524 FORC55_0349 51c5b8744754be5738ed427c93c0a074 286 SUPERFAMILY SSF52540 1 152 5.63E-12 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0349 51c5b8744754be5738ed427c93c0a074 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 41.144 T 17-10-2018 IPR005337 RapZ-like family GO:0005524 FORC55_0649 2af01e02d1fe669706c8c0db40e33865 211 PIRSF PIRSF028688 1 211 3.0E-124 T 17-10-2018 IPR014549 Flagellar protein FlgO FORC55_3351 b4cf336f9353d014f75b8ddcf5fa5a7a 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.8E-35 T 17-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 FORC55_3351 b4cf336f9353d014f75b8ddcf5fa5a7a 125 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 17-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 FORC55_3351 b4cf336f9353d014f75b8ddcf5fa5a7a 125 Gene3D G3DSA:1.10.3830.10 3 122 5.1E-40 T 17-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 FORC55_0442 fb1b957e434577aa985b2af3bba8bc0c 251 Gene3D G3DSA:3.60.21.10 1 248 1.4E-63 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_0442 fb1b957e434577aa985b2af3bba8bc0c 251 SUPERFAMILY SSF56300 8 249 3.64E-53 T 17-10-2018 FORC55_0442 fb1b957e434577aa985b2af3bba8bc0c 251 Pfam PF00149 Calcineurin-like phosphoesterase 18 183 2.7E-13 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_0442 fb1b957e434577aa985b2af3bba8bc0c 251 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 182 237 2.0E-27 T 17-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 FORC55_0442 fb1b957e434577aa985b2af3bba8bc0c 251 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 237 37.736 T 17-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 FORC55_3554 ef0e4c30083bbe2ea95a996d2e0db662 282 Gene3D G3DSA:2.60.120.10 18 275 8.0E-88 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_3554 ef0e4c30083bbe2ea95a996d2e0db662 282 Gene3D G3DSA:2.60.120.10 143 249 8.0E-88 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_3554 ef0e4c30083bbe2ea95a996d2e0db662 282 Pfam PF02678 Pirin 31 121 4.3E-34 T 17-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 FORC55_3554 ef0e4c30083bbe2ea95a996d2e0db662 282 PIRSF PIRSF006232 3 282 8.4E-93 T 17-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 FORC55_3554 ef0e4c30083bbe2ea95a996d2e0db662 282 SUPERFAMILY SSF51182 7 280 2.89E-78 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_3554 ef0e4c30083bbe2ea95a996d2e0db662 282 Pfam PF05726 Pirin C-terminal cupin domain 180 279 2.8E-33 T 17-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 FORC55_2550 f062d327d378b0b79d5322d18feacc25 126 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 4 108 1.9E-9 T 17-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC FORC55_2550 f062d327d378b0b79d5322d18feacc25 126 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 126 3.6E-69 T 17-10-2018 IPR010039 Capsule biosynthesis phosphatase FORC55_2550 f062d327d378b0b79d5322d18feacc25 126 SUPERFAMILY SSF56784 1 108 1.57E-26 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_2550 f062d327d378b0b79d5322d18feacc25 126 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 70 3.8E-6 T 17-10-2018 FORC55_2550 f062d327d378b0b79d5322d18feacc25 126 Gene3D G3DSA:3.40.50.1000 1 126 1.6E-44 T 17-10-2018 IPR023214 HAD superfamily FORC55_1428 00f84b0ff351291549d446130790ad01 231 PIRSF PIRSF006293 1 224 4.6E-82 T 17-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 FORC55_1428 00f84b0ff351291549d446130790ad01 231 SUPERFAMILY SSF52402 1 212 1.94E-68 T 17-10-2018 FORC55_1428 00f84b0ff351291549d446130790ad01 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 49.917 T 17-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 FORC55_1428 00f84b0ff351291549d446130790ad01 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 2.9E-85 T 17-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 FORC55_1428 00f84b0ff351291549d446130790ad01 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.5E-83 T 17-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 FORC55_1428 00f84b0ff351291549d446130790ad01 231 Gene3D G3DSA:3.40.50.620 1 230 1.0E-79 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0874 541bf4d99cf6b6c9492955860b6646b3 162 Gene3D G3DSA:2.40.128.640 54 162 1.6E-40 T 17-10-2018 FORC55_0874 541bf4d99cf6b6c9492955860b6646b3 162 Pfam PF04170 NlpE N-terminal domain 67 152 8.1E-30 T 17-10-2018 IPR007298 Copper resistance lipoprotein NlpE FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 4.6E-86 T 17-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.0E-38 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.582 T 17-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 SMART SM00967 5 81 8.6E-21 T 17-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 SUPERFAMILY SSF75217 69 244 6.15E-48 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 80 5.7E-20 T 17-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 SUPERFAMILY SSF55315 3 77 1.41E-19 T 17-10-2018 IPR029064 50S ribosomal protein L30e-like FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 Gene3D G3DSA:3.30.1330.30 1 77 7.8E-26 T 17-10-2018 IPR029064 50S ribosomal protein L30e-like FORC55_0286 af187314b4b77c0f175c17725d1fc685 247 Gene3D G3DSA:3.40.1280.10 78 244 5.0E-65 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_3552 388b333b8dd309efdf275a434adbbe1f 391 Gene3D G3DSA:3.30.70.270 186 366 5.1E-50 T 17-10-2018 FORC55_3552 388b333b8dd309efdf275a434adbbe1f 391 SMART SM00267 181 361 5.4E-54 T 17-10-2018 IPR000160 GGDEF domain FORC55_3552 388b333b8dd309efdf275a434adbbe1f 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 357 6.5E-40 T 17-10-2018 IPR000160 GGDEF domain FORC55_3552 388b333b8dd309efdf275a434adbbe1f 391 SUPERFAMILY SSF55073 197 363 1.57E-44 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3552 388b333b8dd309efdf275a434adbbe1f 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 360 2.4E-41 T 17-10-2018 IPR000160 GGDEF domain FORC55_3547 2804b68b18bae4f555215a929f4cac1d 457 SMART SM01079 47 223 2.7E-34 T 17-10-2018 IPR006189 CHASE domain FORC55_3547 2804b68b18bae4f555215a929f4cac1d 457 SMART SM00267 283 457 1.0E-49 T 17-10-2018 IPR000160 GGDEF domain FORC55_3547 2804b68b18bae4f555215a929f4cac1d 457 Gene3D G3DSA:3.30.70.270 289 457 2.5E-52 T 17-10-2018 FORC55_3547 2804b68b18bae4f555215a929f4cac1d 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 452 1.3E-45 T 17-10-2018 IPR000160 GGDEF domain FORC55_3547 2804b68b18bae4f555215a929f4cac1d 457 Pfam PF03924 CHASE domain 109 221 2.7E-13 T 17-10-2018 IPR006189 CHASE domain FORC55_3547 2804b68b18bae4f555215a929f4cac1d 457 SUPERFAMILY SSF55073 299 456 5.49E-45 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3547 2804b68b18bae4f555215a929f4cac1d 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 1.9E-42 T 17-10-2018 IPR000160 GGDEF domain FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 Pfam PF00970 Oxidoreductase FAD-binding domain 15 99 2.3E-4 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 SUPERFAMILY SSF63380 2 100 1.78E-16 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 Gene3D G3DSA:2.40.30.10 1 102 1.2E-20 T 17-10-2018 FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 Pfam PF00175 Oxidoreductase NAD-binding domain 111 214 6.3E-23 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 SUPERFAMILY SSF52343 103 234 6.42E-36 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 135 144 1.4E-13 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 1.4E-13 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.4E-13 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 110 129 1.4E-13 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 1.4E-13 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2469 d9574ea4d3f421039f14ad80515ed59d 236 Gene3D G3DSA:3.40.50.80 103 236 4.1E-31 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2898 94b8893e307a60345789683a805035f5 284 SUPERFAMILY SSF158855 31 281 1.18E-60 T 17-10-2018 FORC55_2898 94b8893e307a60345789683a805035f5 284 Pfam PF03280 Proteobacterial lipase chaperone protein 86 270 6.2E-42 T 17-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 FORC55_2898 94b8893e307a60345789683a805035f5 284 Hamap MF_00790 Lipase chaperone [lifO]. 1 278 18.228 T 17-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 FORC55_3543 244eaf3b99e469ca49eb6ce5b6f4604a 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 4.7E-39 T 17-10-2018 IPR000160 GGDEF domain FORC55_3543 244eaf3b99e469ca49eb6ce5b6f4604a 338 SMART SM00267 168 338 1.0E-50 T 17-10-2018 IPR000160 GGDEF domain FORC55_3543 244eaf3b99e469ca49eb6ce5b6f4604a 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 335 8.9E-39 T 17-10-2018 IPR000160 GGDEF domain FORC55_3543 244eaf3b99e469ca49eb6ce5b6f4604a 338 SUPERFAMILY SSF55073 184 336 5.49E-42 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3543 244eaf3b99e469ca49eb6ce5b6f4604a 338 Gene3D G3DSA:3.30.70.270 165 336 1.0E-48 T 17-10-2018 FORC55_2860 85481b56455857b5a06397f0cfa76595 291 Pfam PF00924 Mechanosensitive ion channel 58 180 3.8E-16 T 17-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 FORC55_2860 85481b56455857b5a06397f0cfa76595 291 SUPERFAMILY SSF50182 96 169 2.26E-10 T 17-10-2018 IPR010920 LSM domain superfamily FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 Pfam PF00122 E1-E2 ATPase 318 478 1.1E-46 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 1.7E-76 T 17-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 SUPERFAMILY SSF81653 318 402 7.06E-24 T 17-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 Gene3D G3DSA:3.40.50.1000 482 720 4.5E-68 T 17-10-2018 IPR023214 HAD superfamily FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 17-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 8.5E-35 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 SUPERFAMILY SSF81665 251 764 1.96E-9 T 17-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 SUPERFAMILY SSF56784 500 782 3.44E-52 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 Gene3D G3DSA:3.30.70.100 88 157 3.1E-14 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 272 786 2.1E-126 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00943 Copper-transporting ATPase signature 276 295 3.8E-6 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 3.8E-6 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 3.8E-6 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 3.8E-6 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 Pfam PF00403 Heavy-metal-associated domain 93 154 8.2E-10 T 17-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 2.4E-27 T 17-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 1.1E-154 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 Gene3D G3DSA:2.70.150.20 292 407 1.8E-32 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 1.0E-26 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 1.0E-26 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 1.0E-26 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 1.0E-26 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 1.0E-26 T 17-10-2018 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 5.6E-165 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 SUPERFAMILY SSF55008 85 162 6.81E-18 T 17-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 FORC55_1369 50c967b9df8d6d6c8da80da5d07f6d98 790 Gene3D G3DSA:3.40.1110.10 511 615 4.5E-68 T 17-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 Pfam PF00035 Double-stranded RNA binding motif 151 218 5.0E-16 T 17-10-2018 IPR014720 Double-stranded RNA-binding domain FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 Gene3D G3DSA:3.30.160.20 149 220 4.8E-20 T 17-10-2018 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 Pfam PF14622 Ribonuclease-III-like 15 135 7.8E-35 T 17-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 SUPERFAMILY SSF54768 104 218 3.61E-29 T 17-10-2018 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 SMART SM00535 16 144 1.2E-58 T 17-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 5 218 6.6E-76 T 17-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 SMART SM00358 151 219 3.1E-22 T 17-10-2018 IPR014720 Double-stranded RNA-binding domain FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 Hamap MF_00104 Ribonuclease 3 [rnc]. 4 215 30.386 T 17-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 Gene3D G3DSA:1.10.1520.10 1 142 1.9E-44 T 17-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 ProSitePatterns PS00517 Ribonuclease III family signature. 33 41 - T 17-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 FORC55_0414 f0ff012f50c2efca17057ad3a77b06ce 221 SUPERFAMILY SSF69065 3 154 3.84E-51 T 17-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 FORC55_3138 c96d6ed079f62eb8a692245ff00d5e6c 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 1.0E-14 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_3138 c96d6ed079f62eb8a692245ff00d5e6c 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 89 1.1E-14 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_3138 c96d6ed079f62eb8a692245ff00d5e6c 92 Gene3D G3DSA:3.30.2310.20 1 90 1.8E-16 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 Gene3D G3DSA:2.40.50.100 21 86 1.1E-31 T 17-10-2018 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 17-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 Pfam PF01016 Ribosomal L27 protein 2 82 1.4E-39 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.3E-39 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.3E-39 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.3E-39 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.389 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 SUPERFAMILY SSF110324 2 80 8.72E-35 T 17-10-2018 FORC55_2352 b69a70c0fe18d07231884be99fa864bd 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.5E-43 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 Pfam PF13377 Periplasmic binding protein-like domain 169 328 1.3E-27 T 17-10-2018 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 SUPERFAMILY SSF47413 1 60 1.9E-16 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 17-10-2018 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 Gene3D G3DSA:1.10.260.40 1 59 1.1E-20 T 17-10-2018 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 SMART SM00354 1 71 8.4E-33 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 Gene3D G3DSA:3.40.50.2300 164 286 3.1E-61 T 17-10-2018 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 8.0E-18 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 SUPERFAMILY SSF53822 58 318 1.12E-57 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_3300 a8b84eedad211c3947483594bd3965e7 330 Gene3D G3DSA:3.40.50.2300 65 309 3.1E-61 T 17-10-2018 FORC55_3323 35a637f9b9b942e46b508ec7ffd6025c 527 Pfam PF05231 MASE1 7 285 2.1E-50 T 17-10-2018 IPR007895 MASE1 FORC55_3323 35a637f9b9b942e46b508ec7ffd6025c 527 Gene3D G3DSA:3.30.565.10 386 513 1.9E-28 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3323 35a637f9b9b942e46b508ec7ffd6025c 527 Pfam PF07730 Histidine kinase 320 383 3.6E-12 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 FORC55_3323 35a637f9b9b942e46b508ec7ffd6025c 527 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 513 1.1E-6 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3323 35a637f9b9b942e46b508ec7ffd6025c 527 SUPERFAMILY SSF55874 418 512 4.06E-17 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3323 35a637f9b9b942e46b508ec7ffd6025c 527 SMART SM00387 423 515 1.2E-8 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 SUPERFAMILY SSF51621 461 789 6.0E-98 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 SUPERFAMILY SSF56059 1 383 1.24E-109 T 17-10-2018 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 4.4E-60 T 17-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 SUPERFAMILY SSF52009 348 466 4.06E-34 T 17-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 17-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 344 1.9E-119 T 17-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 Gene3D G3DSA:3.30.1490.20 1 192 5.9E-74 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 17-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 Gene3D G3DSA:3.30.470.20 193 356 6.0E-58 T 17-10-2018 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 Gene3D G3DSA:3.20.20.60 477 786 3.9E-102 T 17-10-2018 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 Gene3D G3DSA:3.50.30.10 358 476 4.5E-41 T 17-10-2018 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 454 4.4E-26 T 17-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 787 0.0 T 17-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 PIRSF PIRSF000854 1 793 0.0 T 17-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 8.9E-6 T 17-10-2018 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 8.9E-6 T 17-10-2018 FORC55_3571 27f229e1d6e4116d12afd720d84b3051 794 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 8.9E-6 T 17-10-2018 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 SUPERFAMILY SSF54719 84 193 9.69E-43 T 17-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 Gene3D G3DSA:1.10.287.990 20 82 1.3E-25 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 1.4E-34 T 17-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 Gene3D G3DSA:2.40.500.20 83 194 7.1E-42 T 17-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.4E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.4E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 SUPERFAMILY SSF46609 1 84 2.09E-35 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 PIRSF PIRSF000349 1 194 1.9E-83 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 17-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0800 6be63a95966cfa919d4fa2fc491fc771 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.3E-37 T 17-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_2333 6c3a2dcedd768ee581891a180d31092f 391 SMART SM00729 6 227 4.7E-57 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_2333 6c3a2dcedd768ee581891a180d31092f 391 Pfam PF04055 Radical SAM superfamily 11 181 6.3E-18 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_2333 6c3a2dcedd768ee581891a180d31092f 391 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.8E-135 T 17-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 FORC55_2333 6c3a2dcedd768ee581891a180d31092f 391 Pfam PF06969 HemN C-terminal domain 314 374 1.9E-10 T 17-10-2018 IPR010723 HemN, C-terminal FORC55_2333 6c3a2dcedd768ee581891a180d31092f 391 Gene3D G3DSA:3.80.30.20 2 309 3.2E-98 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe FORC55_2333 6c3a2dcedd768ee581891a180d31092f 391 SUPERFAMILY SSF102114 3 386 3.01E-113 T 17-10-2018 FORC55_0185 aa4a19e004455010682d81468aeafd03 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 3.2E-262 T 17-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily FORC55_0185 aa4a19e004455010682d81468aeafd03 567 Pfam PF00474 Sodium:solute symporter family 373 489 6.3E-18 T 17-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 FORC55_0185 aa4a19e004455010682d81468aeafd03 567 Pfam PF00474 Sodium:solute symporter family 33 299 1.4E-32 T 17-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 FORC55_0185 aa4a19e004455010682d81468aeafd03 567 Gene3D G3DSA:1.20.1730.10 346 557 9.0E-26 T 17-10-2018 IPR038377 Sodium/glucose symporter superfamily FORC55_0185 aa4a19e004455010682d81468aeafd03 567 Gene3D G3DSA:1.20.1730.10 6 327 1.8E-34 T 17-10-2018 IPR038377 Sodium/glucose symporter superfamily FORC55_2577 de4836e2fb019d15d227beb4ed56fd4e 350 Gene3D G3DSA:1.10.260.40 1 103 1.6E-15 T 17-10-2018 FORC55_2577 de4836e2fb019d15d227beb4ed56fd4e 350 SMART SM00530 5 60 5.5E-13 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2577 de4836e2fb019d15d227beb4ed56fd4e 350 Pfam PF12844 Helix-turn-helix domain 3 63 1.5E-10 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2577 de4836e2fb019d15d227beb4ed56fd4e 350 Gene3D G3DSA:3.40.390.50 130 230 1.8E-5 T 17-10-2018 FORC55_2577 de4836e2fb019d15d227beb4ed56fd4e 350 Pfam PF06114 IrrE N-terminal-like domain 154 269 1.9E-13 T 17-10-2018 IPR010359 IrrE N-terminal-like domain FORC55_2577 de4836e2fb019d15d227beb4ed56fd4e 350 SUPERFAMILY SSF47413 2 62 9.12E-15 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.3E-39 T 17-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:3.40.50.300 4 278 3.5E-151 T 17-10-2018 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 5.4E-22 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:1.10.150.300 120 200 3.5E-151 T 17-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 7.7E-169 T 17-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 SUPERFAMILY SSF81271 279 360 7.19E-37 T 17-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 PIRSF PIRSF006641 1 363 2.1E-157 T 17-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:3.10.20.30 48 362 3.5E-151 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.477 T 17-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 FORC55_0669 eecca8d9f8a54291912fbae4e8350841 363 SUPERFAMILY SSF52540 3 301 3.83E-84 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 Pfam PF01336 OB-fold nucleic acid binding domain 983 1055 1.2E-8 T 17-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 Gene3D G3DSA:2.40.50.140 970 1056 7.9E-7 T 17-10-2018 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 276 719 2.1E-173 T 17-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 Gene3D G3DSA:3.20.20.140 1 254 2.5E-84 T 17-10-2018 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 SMART SM00481 1 58 3.1E-12 T 17-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 Pfam PF14579 Helix-hairpin-helix motif 792 881 1.1E-25 T 17-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 Gene3D G3DSA:1.10.10.1600 417 494 8.1E-31 T 17-10-2018 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 Pfam PF02811 PHP domain 2 155 7.0E-39 T 17-10-2018 IPR004013 PHP domain GO:0003824 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 Gene3D G3DSA:1.10.150.870 759 870 3.9E-5 T 17-10-2018 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 SUPERFAMILY SSF89550 3 247 1.49E-10 T 17-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 FORC55_0616 50dc5cdbb9190837de39f25d428ee14a 1143 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 1 1014 0.0 T 17-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2527 b3f9091dbc65778e3b0b9393030abaf6 206 SUPERFAMILY SSF52317 2 204 6.48E-45 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_2527 b3f9091dbc65778e3b0b9393030abaf6 206 Pfam PF00117 Glutamine amidotransferase class-I 34 202 1.1E-13 T 17-10-2018 IPR017926 Glutamine amidotransferase FORC55_2527 b3f9091dbc65778e3b0b9393030abaf6 206 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 205 31.473 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 FORC55_2527 b3f9091dbc65778e3b0b9393030abaf6 206 Gene3D G3DSA:3.40.50.880 1 205 1.8E-60 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_2527 b3f9091dbc65778e3b0b9393030abaf6 206 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 204 1.1E-60 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 FORC55_2527 b3f9091dbc65778e3b0b9393030abaf6 206 PIRSF PIRSF000495 1 206 4.0E-64 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 FORC55_2518 fe181ad182c1114b6599e927a3a9f42d 438 Pfam PF10996 Beta-Casp domain 234 364 7.2E-25 T 17-10-2018 IPR022712 Beta-Casp domain FORC55_2518 fe181ad182c1114b6599e927a3a9f42d 438 Gene3D G3DSA:3.60.15.10 6 421 1.3E-130 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2518 fe181ad182c1114b6599e927a3a9f42d 438 Gene3D G3DSA:3.40.50.10890 202 390 1.3E-130 T 17-10-2018 FORC55_2518 fe181ad182c1114b6599e927a3a9f42d 438 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 378 437 3.1E-15 T 17-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain FORC55_2518 fe181ad182c1114b6599e927a3a9f42d 438 SUPERFAMILY SSF56281 1 432 5.63E-120 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2518 fe181ad182c1114b6599e927a3a9f42d 438 SMART SM00849 13 218 2.9E-21 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_2518 fe181ad182c1114b6599e927a3a9f42d 438 Pfam PF00753 Metallo-beta-lactamase superfamily 14 204 2.5E-17 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_2518 fe181ad182c1114b6599e927a3a9f42d 438 SMART SM01027 234 364 4.1E-53 T 17-10-2018 IPR022712 Beta-Casp domain FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 189 7.0E-15 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 SMART SM00304 218 271 9.6E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 515 2.5E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 SMART SM00283 286 547 9.2E-98 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 SUPERFAMILY SSF58104 240 548 1.44E-75 T 17-10-2018 FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 411 3.4E-22 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 21 46 3.4E-22 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 3.4E-22 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2896 b994d9df0e2d3959e000b0093fbc0738 548 Gene3D G3DSA:1.10.287.950 218 548 1.8E-69 T 17-10-2018 FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.10.275.10 16 152 2.5E-58 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 SUPERFAMILY SSF48557 14 468 1.16E-144 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 Pfam PF10415 Fumarase C C-terminus 421 474 3.1E-18 T 17-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 Pfam PF00206 Lyase 23 355 1.4E-101 T 17-10-2018 IPR022761 Fumarate lyase, N-terminal FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.20.200.10 153 420 8.4E-113 T 17-10-2018 FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 2.1E-254 T 17-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.10.40.30 421 470 1.1E-29 T 17-10-2018 FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 17-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.6E-25 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 1.6E-25 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 1.6E-25 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_0193 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 1.6E-25 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_2569 fe021b0ec0d0ed6fff9c6ba9c95713c4 315 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 314 44.502 T 17-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 FORC55_2569 fe021b0ec0d0ed6fff9c6ba9c95713c4 315 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 308 4.5E-127 T 17-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 FORC55_2569 fe021b0ec0d0ed6fff9c6ba9c95713c4 315 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 302 2.5E-72 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 FORC55_2569 fe021b0ec0d0ed6fff9c6ba9c95713c4 315 PIRSF PIRSF026649 6 311 1.1E-81 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 SUPERFAMILY SSF55073 80 224 7.53E-25 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 Pfam PF00563 EAL domain 246 481 2.1E-65 T 17-10-2018 IPR001633 EAL domain FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 SMART SM00267 63 230 6.2E-24 T 17-10-2018 IPR000160 GGDEF domain FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 71 225 2.5E-18 T 17-10-2018 IPR000160 GGDEF domain FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 Pfam PF00990 Diguanylate cyclase, GGDEF domain 75 224 3.4E-25 T 17-10-2018 IPR000160 GGDEF domain FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 SUPERFAMILY SSF141868 246 488 2.88E-74 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 Gene3D G3DSA:3.20.20.450 239 493 3.1E-79 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 SMART SM00052 240 486 2.2E-77 T 17-10-2018 IPR001633 EAL domain FORC55_2099 6782d07a77c191079679ce9bb78d0e39 494 Gene3D G3DSA:3.30.70.270 68 236 3.7E-29 T 17-10-2018 FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 PIRSF PIRSF002599 1 70 8.9E-26 T 17-10-2018 IPR012156 Cold shock, CspA GO:0003676 FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 Gene3D G3DSA:2.40.50.140 1 70 8.3E-31 T 17-10-2018 FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 SMART SM00357 6 70 7.7E-30 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 6.8E-30 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 28 37 7.1E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 7 22 7.1E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 43 61 7.1E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 SUPERFAMILY SSF50249 3 69 1.76E-25 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2846 af592fa3625215f70e72c13a0e3daf99 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 17-10-2018 IPR019844 Cold-shock conserved site FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 PIRSF PIRSF001456 3 360 4.5E-144 T 17-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 17-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 17-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.1E-144 T 17-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 SUPERFAMILY SSF103263 4 352 4.45E-151 T 17-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 38.305 T 17-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 17-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 Gene3D G3DSA:3.60.150.10 1 361 8.8E-163 T 17-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_0734 8560e0bf56192ea80ecb2ed693df77f2 361 Pfam PF01264 Chorismate synthase 10 345 2.3E-145 T 17-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 FORC55_3146 1fab0b7146e01563dba068a4d337a35a 100 Gene3D G3DSA:3.30.2310.20 1 96 3.7E-21 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily FORC55_3146 1fab0b7146e01563dba068a4d337a35a 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 87 6.9E-8 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_3146 1fab0b7146e01563dba068a4d337a35a 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 1.2E-19 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_3146 1fab0b7146e01563dba068a4d337a35a 100 SUPERFAMILY SSF143011 1 90 2.98E-5 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily FORC55_0135 a26f57307d7b8ab8799f68a640e58f72 334 Gene3D G3DSA:3.20.20.140 1 333 1.1E-96 T 17-10-2018 FORC55_0135 a26f57307d7b8ab8799f68a640e58f72 334 Pfam PF00962 Adenosine/AMP deaminase 6 327 1.7E-89 T 17-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 FORC55_0135 a26f57307d7b8ab8799f68a640e58f72 334 SUPERFAMILY SSF51556 4 327 7.56E-77 T 17-10-2018 IPR032466 Metal-dependent hydrolase FORC55_0135 a26f57307d7b8ab8799f68a640e58f72 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.474 T 17-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 FORC55_0135 a26f57307d7b8ab8799f68a640e58f72 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 9.2E-125 T 17-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 FORC55_3126 a10252ec3cec70f4214b2ae2d94b8719 141 SUPERFAMILY SSF53098 6 139 9.26E-23 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_3126 a10252ec3cec70f4214b2ae2d94b8719 141 Gene3D G3DSA:3.30.420.10 1 140 3.6E-10 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_3126 a10252ec3cec70f4214b2ae2d94b8719 141 ProSitePatterns PS01043 Transposases, IS30 family, signature. 84 100 - T 17-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 FORC55_3126 a10252ec3cec70f4214b2ae2d94b8719 141 Pfam PF00665 Integrase core domain 3 97 1.2E-9 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 Gene3D G3DSA:3.30.1370.120 252 319 4.8E-11 T 17-10-2018 IPR038591 NolW-like superfamily FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 515 548 - T 17-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 452 4.5E-20 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 571 4.5E-20 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 320 330 4.5E-20 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 407 431 4.5E-20 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 534 552 4.5E-20 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 Gene3D G3DSA:2.60.40.3470 18 138 3.9E-18 T 17-10-2018 FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 Pfam PF03958 Bacterial type II/III secretion system short domain 255 320 4.1E-12 T 17-10-2018 IPR005644 NolW-like FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 SMART SM00965 181 229 1.6E-9 T 17-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 Gene3D G3DSA:3.55.50.30 139 251 6.2E-36 T 17-10-2018 FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 156 569 3.5E-160 T 17-10-2018 IPR013355 Type IV pilus secretin PilQ FORC55_0254 b228bfa8b1f92205881f05c9919ac11e 571 Pfam PF00263 Bacterial type II and III secretion system protein 411 569 1.1E-45 T 17-10-2018 IPR004846 Type II/III secretion system GO:0009306 FORC55_2205 13268c35d2530ec4e085245e166f1a45 331 Pfam PF00005 ABC transporter 35 192 1.4E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2205 13268c35d2530ec4e085245e166f1a45 331 Gene3D G3DSA:3.40.50.300 9 331 7.8E-79 T 17-10-2018 FORC55_2205 13268c35d2530ec4e085245e166f1a45 331 SMART SM00382 43 241 5.1E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2205 13268c35d2530ec4e085245e166f1a45 331 SUPERFAMILY SSF52540 10 262 1.06E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2205 13268c35d2530ec4e085245e166f1a45 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.5E-22 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_2205 13268c35d2530ec4e085245e166f1a45 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.3E-16 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_2205 13268c35d2530ec4e085245e166f1a45 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 SMART SM00387 327 438 3.3E-24 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 Gene3D G3DSA:1.10.287.130 130 282 1.8E-10 T 17-10-2018 FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 1.8E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.8E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 1.8E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.8E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 SUPERFAMILY SSF51206 17 129 3.01E-15 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 437 2.8E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 Gene3D G3DSA:3.30.565.10 288 446 5.9E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 SUPERFAMILY SSF55874 291 435 1.31E-29 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 Pfam PF00027 Cyclic nucleotide-binding domain 20 99 1.2E-8 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_1479 4bc15a5adef74baf9fb5695ab52a4356 449 Gene3D G3DSA:2.60.120.10 5 129 2.2E-11 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_3116 f44bcdfbe3ea4dc9294304d91ce22d16 154 Pfam PF04266 ASCH domain 41 153 6.0E-25 T 17-10-2018 IPR007374 ASCH domain FORC55_3116 f44bcdfbe3ea4dc9294304d91ce22d16 154 SMART SM01022 30 153 5.3E-43 T 17-10-2018 IPR007374 ASCH domain FORC55_3116 f44bcdfbe3ea4dc9294304d91ce22d16 154 PIRSF PIRSF021320 1 154 1.3E-48 T 17-10-2018 IPR009326 Protein of unknown function DUF984 FORC55_3116 f44bcdfbe3ea4dc9294304d91ce22d16 154 Gene3D G3DSA:3.10.400.10 1 154 2.2E-66 T 17-10-2018 FORC55_3116 f44bcdfbe3ea4dc9294304d91ce22d16 154 SUPERFAMILY SSF88697 4 153 6.46E-54 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_3000 f44bcdfbe3ea4dc9294304d91ce22d16 154 Pfam PF04266 ASCH domain 41 153 6.0E-25 T 17-10-2018 IPR007374 ASCH domain FORC55_3000 f44bcdfbe3ea4dc9294304d91ce22d16 154 SMART SM01022 30 153 5.3E-43 T 17-10-2018 IPR007374 ASCH domain FORC55_3000 f44bcdfbe3ea4dc9294304d91ce22d16 154 PIRSF PIRSF021320 1 154 1.3E-48 T 17-10-2018 IPR009326 Protein of unknown function DUF984 FORC55_3000 f44bcdfbe3ea4dc9294304d91ce22d16 154 Gene3D G3DSA:3.10.400.10 1 154 2.2E-66 T 17-10-2018 FORC55_3000 f44bcdfbe3ea4dc9294304d91ce22d16 154 SUPERFAMILY SSF88697 4 153 6.46E-54 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_1401 58abdb033bdc5bb79af81dcf303acbea 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.3E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1401 58abdb033bdc5bb79af81dcf303acbea 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.3E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1401 58abdb033bdc5bb79af81dcf303acbea 200 Gene3D G3DSA:1.10.10.60 2 56 6.7E-19 T 17-10-2018 FORC55_1401 58abdb033bdc5bb79af81dcf303acbea 200 SUPERFAMILY SSF46689 1 70 3.79E-18 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1401 58abdb033bdc5bb79af81dcf303acbea 200 Gene3D G3DSA:1.10.357.10 61 199 1.7E-28 T 17-10-2018 FORC55_1401 58abdb033bdc5bb79af81dcf303acbea 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 8.7E-15 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1401 58abdb033bdc5bb79af81dcf303acbea 200 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 197 2.9E-9 T 17-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type FORC55_0105 a9d693787080363a217f6fc015de38c0 311 Gene3D G3DSA:1.10.150.130 14 108 4.0E-17 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal FORC55_0105 a9d693787080363a217f6fc015de38c0 311 SUPERFAMILY SSF47823 16 107 1.06E-10 T 17-10-2018 FORC55_0105 a9d693787080363a217f6fc015de38c0 311 SUPERFAMILY SSF56349 117 302 1.59E-52 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 FORC55_0105 a9d693787080363a217f6fc015de38c0 311 Pfam PF00589 Phage integrase family 122 290 1.1E-48 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 FORC55_0105 a9d693787080363a217f6fc015de38c0 311 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 9.5E-108 T 17-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 FORC55_0105 a9d693787080363a217f6fc015de38c0 311 Gene3D G3DSA:1.10.443.10 121 298 1.6E-56 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 FORC55_0105 a9d693787080363a217f6fc015de38c0 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 1.0E-17 T 17-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 FORC55_0105 a9d693787080363a217f6fc015de38c0 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.942 T 17-10-2018 IPR023009 Tyrosine recombinase XerC/XerD FORC55_1838 8eeff3619dde5e75ee2afa5daa924ca2 422 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 2 422 2.0E-174 T 17-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 FORC55_1838 8eeff3619dde5e75ee2afa5daa924ca2 422 Gene3D G3DSA:3.40.50.720 99 220 7.4E-17 T 17-10-2018 FORC55_1838 8eeff3619dde5e75ee2afa5daa924ca2 422 Pfam PF13727 CoA-binding domain 20 196 8.9E-48 T 17-10-2018 FORC55_1838 8eeff3619dde5e75ee2afa5daa924ca2 422 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 4 422 9.9E-152 T 17-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase FORC55_1838 8eeff3619dde5e75ee2afa5daa924ca2 422 Pfam PF02397 Bacterial sugar transferase 232 414 2.9E-65 T 17-10-2018 IPR003362 Bacterial sugar transferase FORC55_1838 8eeff3619dde5e75ee2afa5daa924ca2 422 SUPERFAMILY SSF51735 100 225 4.33E-10 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 Gene3D G3DSA:3.55.50.10 104 195 5.2E-84 T 17-10-2018 FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 508 4.2E-129 T 17-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 Gene3D G3DSA:2.40.50.230 362 461 3.1E-41 T 17-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 SUPERFAMILY SSF69349 447 628 2.04E-48 T 17-10-2018 FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 SUPERFAMILY SSF69279 196 370 3.4E-45 T 17-10-2018 FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 Gene3D G3DSA:3.30.1920.30 228 291 5.2E-84 T 17-10-2018 FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 Gene3D G3DSA:2.30.110.50 13 336 5.2E-84 T 17-10-2018 FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 3.7E-77 T 17-10-2018 FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 SUPERFAMILY SSF69279 7 190 7.37E-51 T 17-10-2018 FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 526 1.3E-187 T 17-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset FORC55_1394 1fc3a5e4de4cefaf917576b642a762db 683 SUPERFAMILY SSF69255 369 456 4.97E-33 T 17-10-2018 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 SMART SM01005 236 360 3.5E-69 T 17-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 1.6E-71 T 17-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 SUPERFAMILY SSF51419 11 237 6.67E-71 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 17-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 Hamap MF_01201 Alanine racemase. 4 360 35.634 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 123 135 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 252 267 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 158 169 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 195 222 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 29 45 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 342 355 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 63 81 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 269 284 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 PRINTS PR00992 Alanine racemase signature 290 307 2.6E-72 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 Gene3D G3DSA:2.40.37.10 11 355 1.9E-133 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 Gene3D G3DSA:3.20.20.10 13 220 1.9E-133 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 TIGRFAM TIGR00492 alr: alanine racemase 6 359 2.1E-130 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 1.0E-43 T 17-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2414 a231aa8a85dfc657db95df52125fb1de 364 SUPERFAMILY SSF50621 230 361 2.72E-48 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_3367 3ce70c14fb4122689fdec9d700b6aebe 221 SUPERFAMILY SSF141371 12 115 4.71E-25 T 17-10-2018 FORC55_3367 3ce70c14fb4122689fdec9d700b6aebe 221 Gene3D G3DSA:2.40.10.220 116 214 1.0E-7 T 17-10-2018 FORC55_3367 3ce70c14fb4122689fdec9d700b6aebe 221 SUPERFAMILY SSF141371 117 219 1.44E-18 T 17-10-2018 FORC55_3367 3ce70c14fb4122689fdec9d700b6aebe 221 Gene3D G3DSA:2.30.110.10 5 115 1.2E-9 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 FORC55_3367 3ce70c14fb4122689fdec9d700b6aebe 221 Pfam PF12945 Flagellar protein YcgR 16 106 1.3E-8 T 17-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal FORC55_3367 3ce70c14fb4122689fdec9d700b6aebe 221 Pfam PF07238 PilZ domain 115 208 1.9E-15 T 17-10-2018 IPR009875 PilZ domain GO:0035438 FORC55_0440 c06b7132a959a088728e5ce30d77c083 208 SUPERFAMILY SSF55811 2 206 8.51E-46 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_0440 c06b7132a959a088728e5ce30d77c083 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 7.7E-60 T 17-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 FORC55_0440 c06b7132a959a088728e5ce30d77c083 208 Gene3D G3DSA:3.90.79.10 1 208 1.9E-64 T 17-10-2018 FORC55_0440 c06b7132a959a088728e5ce30d77c083 208 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 FORC55_0440 c06b7132a959a088728e5ce30d77c083 208 Pfam PF00293 NUDIX domain 59 175 6.4E-9 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 Gene3D G3DSA:1.20.1270.20 153 235 1.4E-27 T 17-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 Gene3D G3DSA:1.20.1270.20 1 142 5.2E-35 T 17-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 PIRSF PIRSF000076 1 553 5.1E-238 T 17-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.206 T 17-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 Gene3D G3DSA:3.40.50.2030 237 382 9.2E-63 T 17-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 SUPERFAMILY SSF56821 1 551 5.8E-190 T 17-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 4.4E-162 T 17-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.6E-226 T 17-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 FORC55_2366 18d0e235ff443f0c951ec95b84b96430 553 Gene3D G3DSA:3.40.50.2030 383 551 1.5E-59 T 17-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 FORC55_1841 1a5e960a07ee29e2a40a47c46a2115aa 265 Pfam PF04932 O-Antigen ligase 44 186 2.7E-20 T 17-10-2018 IPR007016 O-antigen ligase-related FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 SUPERFAMILY SSF56024 273 470 5.83E-46 T 17-10-2018 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 SUPERFAMILY SSF56024 69 313 3.66E-51 T 17-10-2018 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 Pfam PF13091 PLD-like domain 134 266 3.5E-15 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 Pfam PF13091 PLD-like domain 327 445 2.0E-24 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 2.8E-7 T 17-10-2018 IPR027379 Cardiolipin synthase N-terminal FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 484 6.6E-152 T 17-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 Gene3D G3DSA:3.30.870.10 117 311 1.0E-36 T 17-10-2018 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 PIRSF PIRSF000850 211 252 130.0 T 17-10-2018 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 PIRSF PIRSF000850 101 196 22.0 T 17-10-2018 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 PIRSF PIRSF000850 290 376 0.0011 T 17-10-2018 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 PIRSF PIRSF000850 387 472 0.7 T 17-10-2018 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 Gene3D G3DSA:3.30.870.10 314 456 1.6E-22 T 17-10-2018 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 50.686 T 17-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 SMART SM00155 219 246 3.7E-6 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 FORC55_1169 241cca9d784a758495249ec1bbd4280f 484 SMART SM00155 397 424 1.8E-5 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 Gene3D G3DSA:3.40.50.720 3 332 3.4E-127 T 17-10-2018 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.084 T 17-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 5.5E-196 T 17-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 SUPERFAMILY SSF55347 159 321 3.27E-58 T 17-10-2018 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 6.3E-29 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 6.3E-29 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 6.3E-29 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 6.3E-29 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 6.3E-29 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 SUPERFAMILY SSF51735 2 185 3.08E-48 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2311 13448c060ca36de90c732a1c257544ac 341 PIRSF PIRSF000149 1 341 1.0E-123 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 SMART SM00846 2 159 9.8E-70 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 Gene3D G3DSA:3.30.360.10 158 322 3.4E-127 T 17-10-2018 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 107 7.8E-31 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2311 13448c060ca36de90c732a1c257544ac 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 2.1E-55 T 17-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0670 dca53cd2289939e02937410b6a91e1a2 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 5.8E-53 T 17-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 FORC55_0670 dca53cd2289939e02937410b6a91e1a2 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 3.3E-68 T 17-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 FORC55_0670 dca53cd2289939e02937410b6a91e1a2 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.756 T 17-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 FORC55_0670 dca53cd2289939e02937410b6a91e1a2 196 Gene3D G3DSA:3.40.50.1470 1 196 1.5E-76 T 17-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 FORC55_0670 dca53cd2289939e02937410b6a91e1a2 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 17-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 FORC55_0670 dca53cd2289939e02937410b6a91e1a2 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 17-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 FORC55_0670 dca53cd2289939e02937410b6a91e1a2 196 SUPERFAMILY SSF53178 5 194 1.11E-68 T 17-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 Gene3D G3DSA:3.10.350.10 397 445 3.1E-15 T 17-10-2018 IPR036779 LysM domain superfamily FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 SUPERFAMILY SSF54106 266 310 7.06E-11 T 17-10-2018 FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 Gene3D G3DSA:3.10.350.10 256 321 7.5E-15 T 17-10-2018 IPR036779 LysM domain superfamily FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 Gene3D G3DSA:3.10.350.10 328 393 5.2E-15 T 17-10-2018 IPR036779 LysM domain superfamily FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 SUPERFAMILY SSF54106 340 385 2.22E-11 T 17-10-2018 FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 Pfam PF01464 Transglycosylase SLT domain 50 150 1.8E-24 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 Pfam PF01476 LysM domain 268 310 1.8E-12 T 17-10-2018 IPR018392 LysM domain FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 Pfam PF01476 LysM domain 342 385 4.2E-12 T 17-10-2018 IPR018392 LysM domain FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 Pfam PF01476 LysM domain 400 442 1.3E-12 T 17-10-2018 IPR018392 LysM domain FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 SUPERFAMILY SSF54106 397 444 1.26E-10 T 17-10-2018 FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 SMART SM00257 267 310 1.0E-13 T 17-10-2018 IPR018392 LysM domain FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 SMART SM00257 399 443 1.6E-11 T 17-10-2018 IPR018392 LysM domain FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 SMART SM00257 341 385 9.4E-14 T 17-10-2018 IPR018392 LysM domain FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 Gene3D G3DSA:1.10.530.10 34 185 2.3E-30 T 17-10-2018 FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 SUPERFAMILY SSF53955 35 194 5.79E-43 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_0623 07a3696cdff44e3dc5949a8abe4096b7 451 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 57 85 - T 17-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 FORC55_3076 e414b202bb35b19212d9366cc1a882c0 90 Gene3D G3DSA:1.10.1220.10 1 49 4.6E-31 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 FORC55_3076 e414b202bb35b19212d9366cc1a882c0 90 SUPERFAMILY SSF47598 6 81 8.67E-19 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 FORC55_3076 e414b202bb35b19212d9366cc1a882c0 90 Gene3D G3DSA:1.20.890.30 50 90 3.0E-25 T 17-10-2018 FORC55_3076 e414b202bb35b19212d9366cc1a882c0 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 2.0E-21 T 17-10-2018 IPR014795 Vibrio phage ICP1, Orf50 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 156 1.6E-28 T 17-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 PRINTS PR00095 Anthranilate synthase component I signature 390 404 2.3E-18 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 PRINTS PR00095 Anthranilate synthase component I signature 296 309 2.3E-18 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 PRINTS PR00095 Anthranilate synthase component I signature 310 323 2.3E-18 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 PRINTS PR00095 Anthranilate synthase component I signature 405 419 2.3E-18 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 SUPERFAMILY SSF56322 8 457 2.75E-144 T 17-10-2018 IPR005801 ADC synthase GO:0009058 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 450 8.1E-123 T 17-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 Gene3D G3DSA:3.60.120.10 5 458 4.9E-171 T 17-10-2018 IPR005801 ADC synthase GO:0009058 FORC55_1491 c93df5f6c4e8a104e77aa03de1c17765 458 Pfam PF00425 chorismate binding enzyme 196 448 3.1E-95 T 17-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 SUPERFAMILY SSF82693 41 137 8.79E-18 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Gene3D G3DSA:1.20.1640.10 503 1005 1.4E-243 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 SUPERFAMILY SSF82866 793 1012 4.45E-44 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Gene3D G3DSA:3.30.70.1320 138 328 1.4E-243 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 SUPERFAMILY SSF82866 295 495 1.1E-31 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.8E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.8E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.8E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.8E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.8E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.8E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Gene3D G3DSA:1.20.1640.10 12 502 1.4E-243 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 SUPERFAMILY SSF82693 138 324 7.32E-19 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Gene3D G3DSA:3.30.70.1430 557 655 1.4E-243 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Gene3D G3DSA:3.30.2090.10 182 275 1.4E-243 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 6.7E-161 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Gene3D G3DSA:3.30.70.1440 656 855 1.4E-243 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Gene3D G3DSA:3.30.70.1430 40 805 1.4E-243 T 17-10-2018 FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 SUPERFAMILY SSF82714 708 788 1.02E-9 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 Gene3D G3DSA:3.30.2090.10 707 797 1.4E-243 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 SUPERFAMILY SSF82714 187 269 9.68E-13 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1015 cb601d333c2cc23ddbd3e8ca1ef2b548 1016 SUPERFAMILY SSF82693 557 650 4.19E-5 T 17-10-2018 FORC55_2116 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_2116 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_2116 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_2116 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_3162 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_3162 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_3162 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_3162 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_2138 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_2138 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_2138 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_2138 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_3127 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_3127 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_3127 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_3127 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_3057 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_3057 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_3057 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_3057 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_1931 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_1931 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_1931 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_1931 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_2803 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_2803 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_2803 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_2803 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_2672 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_2672 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_2672 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_2672 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_2098 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_2098 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF03050 Transposase IS66 family 180 464 2.7E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_2098 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 1.1E-12 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_2098 3cb8fae32551ffda5fba53cac311bf1b 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_0713 dbc0144b07f2162af3f6f4460837a7fb 136 PIRSF PIRSF039090 1 133 5.0E-45 T 17-10-2018 IPR003713 Flagellar protein FliS GO:0044780 FORC55_0713 dbc0144b07f2162af3f6f4460837a7fb 136 Gene3D G3DSA:1.20.120.340 2 126 3.9E-41 T 17-10-2018 FORC55_0713 dbc0144b07f2162af3f6f4460837a7fb 136 SUPERFAMILY SSF101116 6 127 3.27E-40 T 17-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 FORC55_0713 dbc0144b07f2162af3f6f4460837a7fb 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 4.5E-27 T 17-10-2018 IPR003713 Flagellar protein FliS GO:0044780 FORC55_0713 dbc0144b07f2162af3f6f4460837a7fb 136 Pfam PF02561 Flagellar protein FliS 6 122 5.3E-39 T 17-10-2018 IPR003713 Flagellar protein FliS GO:0044780 FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 1.4E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.4E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.4E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 SUPERFAMILY SSF58104 235 542 1.14E-72 T 17-10-2018 FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 Gene3D G3DSA:1.10.287.950 211 543 4.7E-75 T 17-10-2018 FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 505 4.1E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 166 1.1E-18 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 SMART SM00304 211 265 4.1E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1481 cb5b8e91cc3a6873d0a9675e112c20cc 543 SMART SM00283 280 541 2.2E-72 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0652 66cb26ffc3e3426f23a54c68e10db96c 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 102 2.3E-24 T 17-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 FORC55_0652 66cb26ffc3e3426f23a54c68e10db96c 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 1.5E-17 T 17-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal FORC55_0652 66cb26ffc3e3426f23a54c68e10db96c 107 SUPERFAMILY SSF101498 3 101 2.62E-20 T 17-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 SUPERFAMILY SSF58104 314 623 2.75E-72 T 17-10-2018 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 SMART SM00283 361 622 6.4E-77 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 SUPERFAMILY SSF103190 62 183 3.14E-17 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 Pfam PF00672 HAMP domain 294 342 1.3E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 Gene3D G3DSA:3.30.450.20 49 266 3.4E-85 T 17-10-2018 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 SMART SM00304 292 346 9.3E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 SMART SM00304 374 441 31.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 Gene3D G3DSA:3.30.450.20 62 173 3.4E-85 T 17-10-2018 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 589 4.4E-43 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 Gene3D G3DSA:1.10.287.950 291 623 7.4E-67 T 17-10-2018 FORC55_3511 dc97e12a7ddd3be63244d50712e42c5f 623 Pfam PF02743 Cache domain 44 255 2.6E-32 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 172.743 T 17-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 Gene3D G3DSA:3.30.420.40 3 195 2.4E-69 T 17-10-2018 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 17-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 SUPERFAMILY SSF53067 5 196 6.28E-65 T 17-10-2018 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 17-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 PIRSF PIRSF000722 2 400 2.4E-138 T 17-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.6E-148 T 17-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 SUPERFAMILY SSF53067 158 398 5.18E-81 T 17-10-2018 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 Gene3D G3DSA:3.30.420.40 196 400 1.8E-74 T 17-10-2018 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 Pfam PF00871 Acetokinase family 6 390 1.3E-146 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 PRINTS PR00471 Acetate kinase family signature 6 17 2.9E-47 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 PRINTS PR00471 Acetate kinase family signature 378 390 2.9E-47 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 PRINTS PR00471 Acetate kinase family signature 173 186 2.9E-47 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 PRINTS PR00471 Acetate kinase family signature 321 337 2.9E-47 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 PRINTS PR00471 Acetate kinase family signature 203 224 2.9E-47 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2910 c9537b14cb69b14159464d50b088f11d 400 PRINTS PR00471 Acetate kinase family signature 299 312 2.9E-47 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 Pfam PF01434 Peptidase family M41 383 592 4.7E-81 T 17-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 6.6E-46 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 Pfam PF06480 FtsH Extracellular 5 94 1.1E-11 T 17-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 Gene3D G3DSA:3.40.50.300 137 323 3.2E-70 T 17-10-2018 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 5.4E-243 T 17-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 Gene3D G3DSA:1.10.8.60 324 397 1.1E-27 T 17-10-2018 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 SMART SM00382 185 324 3.6E-26 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 17-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 SUPERFAMILY SSF140990 403 601 1.23E-75 T 17-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 629 37.234 T 17-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 SUPERFAMILY SSF52540 145 392 5.12E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 Gene3D G3DSA:2.40.50.920 24 100 7.9E-31 T 17-10-2018 FORC55_2186 2eea732c2d4717647b6936d20c2216f7 648 Gene3D G3DSA:1.20.58.760 398 601 9.4E-72 T 17-10-2018 FORC55_1429 6a22d82a1ce7a95a0ad9d740843b63dc 222 Pfam PF04055 Radical SAM superfamily 25 122 5.1E-8 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_1429 6a22d82a1ce7a95a0ad9d740843b63dc 222 SUPERFAMILY SSF102114 24 120 1.44E-6 T 17-10-2018 FORC55_1429 6a22d82a1ce7a95a0ad9d740843b63dc 222 Pfam PF13394 4Fe-4S single cluster domain 23 135 2.4E-12 T 17-10-2018 FORC55_1429 6a22d82a1ce7a95a0ad9d740843b63dc 222 Gene3D G3DSA:3.20.20.70 1 222 1.7E-54 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1429 6a22d82a1ce7a95a0ad9d740843b63dc 222 PIRSF PIRSF000370 1 222 1.6E-70 T 17-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 FORC55_1429 6a22d82a1ce7a95a0ad9d740843b63dc 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 35.298 T 17-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 FORC55_1429 6a22d82a1ce7a95a0ad9d740843b63dc 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 222 3.8E-113 T 17-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 FORC55_2017 fb4680c80a00380f143681700320828e 701 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 6.7E-31 T 17-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 FORC55_2017 fb4680c80a00380f143681700320828e 701 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.315 T 17-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 FORC55_2017 fb4680c80a00380f143681700320828e 701 Gene3D G3DSA:3.30.870.10 319 499 5.4E-72 T 17-10-2018 FORC55_2017 fb4680c80a00380f143681700320828e 701 SUPERFAMILY SSF143724 107 313 7.26E-65 T 17-10-2018 FORC55_2017 fb4680c80a00380f143681700320828e 701 SUPERFAMILY SSF140356 4 104 2.49E-33 T 17-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 FORC55_2017 fb4680c80a00380f143681700320828e 701 PIRSF PIRSF015589 1 696 6.0E-254 T 17-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 FORC55_2017 fb4680c80a00380f143681700320828e 701 SUPERFAMILY SSF56024 315 493 1.07E-54 T 17-10-2018 FORC55_2017 fb4680c80a00380f143681700320828e 701 Gene3D G3DSA:3.30.870.10 500 686 4.2E-72 T 17-10-2018 FORC55_2017 fb4680c80a00380f143681700320828e 701 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 2.2E-144 T 17-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 FORC55_2017 fb4680c80a00380f143681700320828e 701 Gene3D G3DSA:3.30.1840.10 110 307 7.8E-76 T 17-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 FORC55_2017 fb4680c80a00380f143681700320828e 701 Pfam PF02503 Polyphosphate kinase middle domain 119 320 2.3E-47 T 17-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 FORC55_2017 fb4680c80a00380f143681700320828e 701 Gene3D G3DSA:1.20.58.310 9 109 3.0E-36 T 17-10-2018 FORC55_2017 fb4680c80a00380f143681700320828e 701 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.2E-265 T 17-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 FORC55_2017 fb4680c80a00380f143681700320828e 701 SUPERFAMILY SSF56024 500 684 2.04E-67 T 17-10-2018 FORC55_3279 a889a8cde2c6e1009c522a86727b96f5 240 SUPERFAMILY SSF53335 14 113 2.82E-10 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_3279 a889a8cde2c6e1009c522a86727b96f5 240 Gene3D G3DSA:3.40.50.150 2 166 3.2E-42 T 17-10-2018 FORC55_3279 a889a8cde2c6e1009c522a86727b96f5 240 Pfam PF12847 Methyltransferase domain 4 160 5.9E-23 T 17-10-2018 FORC55_3279 a889a8cde2c6e1009c522a86727b96f5 240 PIRSF PIRSF028234 1 234 6.7E-122 T 17-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 17-10-2018 IPR019844 Cold-shock conserved site FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 7 22 1.5E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 42 60 1.5E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 27 36 1.5E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 PIRSF PIRSF002599 1 69 2.9E-23 T 17-10-2018 IPR012156 Cold shock, CspA GO:0003676 FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 SUPERFAMILY SSF50249 3 68 2.45E-24 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 SMART SM00357 6 69 3.8E-31 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 Gene3D G3DSA:2.40.50.140 5 68 6.3E-29 T 17-10-2018 FORC55_2863 74e0597bce1c9ea10a289576a4c4dd81 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 2.5E-29 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2997 998d17a2c309aaf9a499d236683eab2e 176 Pfam PF13302 Acetyltransferase (GNAT) domain 5 148 4.7E-22 T 17-10-2018 IPR000182 GNAT domain FORC55_2997 998d17a2c309aaf9a499d236683eab2e 176 Gene3D G3DSA:3.40.630.30 1 174 8.9E-39 T 17-10-2018 FORC55_2997 998d17a2c309aaf9a499d236683eab2e 176 SUPERFAMILY SSF55729 2 173 3.74E-37 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3048 998d17a2c309aaf9a499d236683eab2e 176 Pfam PF13302 Acetyltransferase (GNAT) domain 5 148 4.7E-22 T 17-10-2018 IPR000182 GNAT domain FORC55_3048 998d17a2c309aaf9a499d236683eab2e 176 Gene3D G3DSA:3.40.630.30 1 174 8.9E-39 T 17-10-2018 FORC55_3048 998d17a2c309aaf9a499d236683eab2e 176 SUPERFAMILY SSF55729 2 173 3.74E-37 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2894 339f236259e3e9f4a7e073345a96dd28 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 149 160 - T 17-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 FORC55_2894 339f236259e3e9f4a7e073345a96dd28 418 SUPERFAMILY SSF52266 148 409 6.33E-22 T 17-10-2018 FORC55_2894 339f236259e3e9f4a7e073345a96dd28 418 Gene3D G3DSA:3.40.50.1110 136 415 4.7E-40 T 17-10-2018 IPR036514 SGNH hydrolase superfamily FORC55_2894 339f236259e3e9f4a7e073345a96dd28 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 149 408 7.5E-14 T 17-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 FORC55_3275 67e8f622ce5c0fc71d5da081dc176901 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 315 5.1E-18 T 17-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 FORC55_3275 67e8f622ce5c0fc71d5da081dc176901 323 SUPERFAMILY SSF51735 106 289 1.67E-45 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3275 67e8f622ce5c0fc71d5da081dc176901 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 1.6E-47 T 17-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 FORC55_3275 67e8f622ce5c0fc71d5da081dc176901 323 Gene3D G3DSA:3.40.50.720 102 292 5.3E-121 T 17-10-2018 FORC55_3275 67e8f622ce5c0fc71d5da081dc176901 323 SUPERFAMILY SSF52283 1 137 2.34E-21 T 17-10-2018 FORC55_3275 67e8f622ce5c0fc71d5da081dc176901 323 Gene3D G3DSA:3.40.50.720 2 307 5.3E-121 T 17-10-2018 FORC55_1905 2be569fe18c144df58e0a130b7a644c4 170 SUPERFAMILY SSF54523 5 89 2.2E-13 T 17-10-2018 FORC55_1905 2be569fe18c144df58e0a130b7a644c4 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 3.8E-5 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1905 2be569fe18c144df58e0a130b7a644c4 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1905 2be569fe18c144df58e0a130b7a644c4 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.4E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1905 2be569fe18c144df58e0a130b7a644c4 170 PIRSF PIRSF024622 1 170 4.7E-66 T 17-10-2018 IPR016824 Tfp pilus assembly protein FimT FORC55_1905 2be569fe18c144df58e0a130b7a644c4 170 Pfam PF12019 Type II transport protein GspH 41 148 1.9E-9 T 17-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 FORC55_1905 2be569fe18c144df58e0a130b7a644c4 170 Gene3D G3DSA:3.30.700.10 5 170 2.0E-8 T 17-10-2018 FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.3E-50 T 17-10-2018 IPR023635 Peptide deformylase FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 PIRSF PIRSF004749 1 168 9.7E-53 T 17-10-2018 IPR023635 Peptide deformylase FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 SUPERFAMILY SSF56420 2 164 3.53E-57 T 17-10-2018 IPR036821 Peptide deformylase superfamily FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.054 T 17-10-2018 IPR023635 Peptide deformylase FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.4E-31 T 17-10-2018 IPR023635 Peptide deformylase FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.4E-31 T 17-10-2018 IPR023635 Peptide deformylase FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.4E-31 T 17-10-2018 IPR023635 Peptide deformylase FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.4E-31 T 17-10-2018 IPR023635 Peptide deformylase FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 Gene3D G3DSA:3.90.45.10 1 168 1.8E-67 T 17-10-2018 IPR036821 Peptide deformylase superfamily FORC55_2826 b25fc0a7463892dc4832c001e5739cd5 168 Pfam PF01327 Polypeptide deformylase 4 152 1.3E-47 T 17-10-2018 IPR023635 Peptide deformylase FORC55_3125 e372f0b084b993d2819e4380e99bec54 171 SUPERFAMILY SSF55729 2 168 1.61E-31 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3125 e372f0b084b993d2819e4380e99bec54 171 Pfam PF00583 Acetyltransferase (GNAT) family 23 143 7.9E-13 T 17-10-2018 IPR000182 GNAT domain FORC55_3125 e372f0b084b993d2819e4380e99bec54 171 Gene3D G3DSA:3.40.630.30 1 170 6.0E-38 T 17-10-2018 FORC55_3050 e372f0b084b993d2819e4380e99bec54 171 SUPERFAMILY SSF55729 2 168 1.61E-31 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3050 e372f0b084b993d2819e4380e99bec54 171 Pfam PF00583 Acetyltransferase (GNAT) family 23 143 7.9E-13 T 17-10-2018 IPR000182 GNAT domain FORC55_3050 e372f0b084b993d2819e4380e99bec54 171 Gene3D G3DSA:3.40.630.30 1 170 6.0E-38 T 17-10-2018 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 2.8E-20 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 Pfam PF14815 NUDIX domain 231 343 1.2E-22 T 17-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 SUPERFAMILY SSF55811 218 344 2.72E-26 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 Gene3D G3DSA:1.10.1670.10 7 209 3.5E-88 T 17-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 266 1.3E-131 T 17-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 SUPERFAMILY SSF48150 3 223 1.37E-76 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 Pfam PF00633 Helix-hairpin-helix motif 97 125 6.8E-7 T 17-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 SMART SM00478 37 188 5.8E-48 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 SMART SM00525 189 209 1.8E-4 T 17-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 17-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 17-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 Gene3D G3DSA:1.10.340.30 19 130 3.5E-88 T 17-10-2018 FORC55_2337 a67ab862924cb138fc15faac94eadeb8 353 Gene3D G3DSA:3.90.79.10 220 346 6.1E-15 T 17-10-2018 FORC55_1752 090bffd063132a470b8a4c0653b884ab 154 SUPERFAMILY SSF54690 4 149 5.62E-55 T 17-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 FORC55_1752 090bffd063132a470b8a4c0653b884ab 154 Gene3D G3DSA:3.90.1170.40 1 149 9.3E-55 T 17-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 FORC55_1752 090bffd063132a470b8a4c0653b884ab 154 Pfam PF02391 MoaE protein 7 120 1.6E-37 T 17-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 37 195 1.4E-32 T 17-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 SMART SM00279 200 235 1.5E-7 T 17-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 198 288 7.3E-22 T 17-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 Hamap MF_01192 Flap endonuclease Xni [xni]. 35 288 45.242 T 17-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 SMART SM00475 36 287 1.2E-62 T 17-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 SUPERFAMILY SSF88723 37 197 2.16E-39 T 17-10-2018 IPR029060 PIN-like domain superfamily FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 Gene3D G3DSA:3.40.50.1010 34 199 1.8E-51 T 17-10-2018 FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 SUPERFAMILY SSF47807 197 288 2.09E-19 T 17-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily FORC55_1872 d999c1955878c2b19fc1c09caaa1ec75 292 Gene3D G3DSA:1.10.150.20 200 288 2.3E-21 T 17-10-2018 FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 Gene3D G3DSA:1.10.10.10 3 88 6.9E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.2E-20 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 Pfam PF03466 LysR substrate binding domain 90 285 1.4E-41 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 SUPERFAMILY SSF46785 3 111 7.35E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 SUPERFAMILY SSF53850 87 286 1.29E-36 T 17-10-2018 FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 Gene3D G3DSA:3.40.190.10 165 268 1.5E-34 T 17-10-2018 FORC55_3177 2a7eebbeae68ad09acf4c7db98d23f3b 301 Gene3D G3DSA:3.40.190.10 92 276 1.5E-34 T 17-10-2018 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 1.4E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 Gene3D G3DSA:3.30.450.20 86 200 1.2E-10 T 17-10-2018 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 SMART SM00091 98 166 2.0E-5 T 17-10-2018 IPR000014 PAS domain FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 8.2E-137 T 17-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 Gene3D G3DSA:1.10.287.130 201 275 9.6E-21 T 17-10-2018 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 SMART SM00387 317 429 2.3E-33 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 SUPERFAMILY SSF55874 261 427 5.63E-41 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.0E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 Gene3D G3DSA:3.30.565.10 279 430 2.5E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 1.3E-5 T 17-10-2018 IPR000014 PAS domain FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 SUPERFAMILY SSF55785 86 197 3.49E-11 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 3.5E-31 T 17-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 SMART SM00388 205 272 3.6E-20 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 SUPERFAMILY SSF47384 192 272 1.16E-18 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_2020 62e9ae4584943f40e3f1148287e90e63 433 Pfam PF00989 PAS fold 99 153 1.4E-7 T 17-10-2018 IPR013767 PAS fold GO:0006355 FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 Gene3D G3DSA:2.60.40.1110 166 279 3.8E-24 T 17-10-2018 FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 Gene3D G3DSA:2.60.40.1110 31 163 1.3E-26 T 17-10-2018 FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 Pfam PF03714 Bacterial pullanase-associated domain 48 162 1.5E-11 T 17-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 Pfam PF03714 Bacterial pullanase-associated domain 176 279 3.5E-8 T 17-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 Gene3D G3DSA:2.60.40.10 407 455 4.5E-6 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 SUPERFAMILY SSF49452 170 279 1.34E-28 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 Gene3D G3DSA:2.60.40.1130 292 406 1.7E-11 T 17-10-2018 FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 SUPERFAMILY SSF81296 284 409 1.13E-19 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_0191 f501ed81983b3713a801be2e1a282d87 456 SUPERFAMILY SSF49452 15 162 1.9E-26 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 FORC55_0619 ba2801053ed635309b4aaad87a750eae 107 Gene3D G3DSA:1.10.760.10 25 107 8.9E-26 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0619 ba2801053ed635309b4aaad87a750eae 107 Pfam PF00034 Cytochrome c 33 107 2.5E-10 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_0619 ba2801053ed635309b4aaad87a750eae 107 SUPERFAMILY SSF46626 8 107 4.73E-23 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 SUPERFAMILY SSF51395 434 1191 2.89E-251 T 17-10-2018 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 Pfam PF04898 Glutamate synthase central domain 458 738 6.0E-104 T 17-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 Gene3D G3DSA:2.160.20.60 1201 1468 1.1E-100 T 17-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 1.4E-152 T 17-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 SUPERFAMILY SSF69336 1212 1465 6.93E-88 T 17-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 Gene3D G3DSA:3.60.20.10 13 436 5.8E-165 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 Gene3D G3DSA:3.20.20.70 437 781 1.1E-122 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 Pfam PF01493 GXGXG motif 1236 1420 3.3E-73 T 17-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 SUPERFAMILY SSF56235 13 429 3.51E-148 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 Gene3D G3DSA:3.20.20.70 782 1200 2.9E-183 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0498 f948d66bf85b4da37cfacc27ae54c07d 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.6E-178 T 17-10-2018 IPR017932 Glutamine amidotransferase type 2 domain FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 8.2E-22 T 17-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 SUPERFAMILY SSF55653 60 149 6.93E-26 T 17-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 Gene3D G3DSA:3.10.430.100 61 149 1.8E-30 T 17-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 17-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 Gene3D G3DSA:3.40.5.10 1 50 6.5E-24 T 17-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 SUPERFAMILY SSF55658 1 57 3.84E-19 T 17-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 6.2E-25 T 17-10-2018 IPR020069 Ribosomal protein L9, C-terminal FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.285 T 17-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2417 7eb32ac95c1bc7fa4ad01d787464972b 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-55 T 17-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_1135 ad24c6832c8fd39a6219bacdde9e25e6 132 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 131 5.7E-48 T 17-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein FORC55_1135 ad24c6832c8fd39a6219bacdde9e25e6 132 PIRSF PIRSF007010 1 132 2.5E-63 T 17-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein FORC55_1135 ad24c6832c8fd39a6219bacdde9e25e6 132 Gene3D G3DSA:3.30.300.250 21 132 7.7E-48 T 17-10-2018 FORC55_2628 07d1cc941f50824490e25fbfdab9029f 133 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 55 129 1.1E-14 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_2628 07d1cc941f50824490e25fbfdab9029f 133 PRINTS PR00607 Class IE cytochrome C signature 119 130 3.2E-16 T 17-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 FORC55_2628 07d1cc941f50824490e25fbfdab9029f 133 PRINTS PR00607 Class IE cytochrome C signature 65 76 3.2E-16 T 17-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 FORC55_2628 07d1cc941f50824490e25fbfdab9029f 133 PRINTS PR00607 Class IE cytochrome C signature 76 86 3.2E-16 T 17-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 FORC55_2628 07d1cc941f50824490e25fbfdab9029f 133 PRINTS PR00607 Class IE cytochrome C signature 104 116 3.2E-16 T 17-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 FORC55_2628 07d1cc941f50824490e25fbfdab9029f 133 SUPERFAMILY SSF46626 56 129 5.7E-19 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_2628 07d1cc941f50824490e25fbfdab9029f 133 Gene3D G3DSA:1.10.760.10 55 132 6.0E-32 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 Gene3D G3DSA:2.40.30.10 240 447 3.4E-74 T 17-10-2018 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 SUPERFAMILY SSF52218 71 216 3.43E-48 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 SUPERFAMILY SSF52343 452 607 2.75E-52 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 Pfam PF00667 FAD binding domain 239 432 2.6E-32 T 17-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 288 2.7E-28 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 2.7E-28 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 2.7E-28 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 427 436 2.7E-28 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 2.7E-28 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 2.7E-28 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 2.7E-28 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 502 513 2.7E-28 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 Gene3D G3DSA:1.20.990.10 288 392 3.4E-74 T 17-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00369 Flavodoxin signature 177 196 1.9E-14 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00369 Flavodoxin signature 153 163 1.9E-14 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00369 Flavodoxin signature 121 132 1.9E-14 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PRINTS PR00369 Flavodoxin signature 73 86 1.9E-14 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 Gene3D G3DSA:3.40.50.360 63 227 3.3E-49 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 607 2.1E-255 T 17-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 7 607 49.918 T 17-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 Gene3D G3DSA:3.40.50.80 453 607 4.0E-60 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 Pfam PF00258 Flavodoxin 74 204 4.6E-31 T 17-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 PIRSF PIRSF000207 7 607 3.7E-266 T 17-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 SUPERFAMILY SSF63380 237 453 1.36E-65 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_2403 ee83cee6383f302bf8e954c06015f1f1 607 Pfam PF00175 Oxidoreductase NAD-binding domain 465 571 2.0E-17 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 FORC55_2009 ad7cdc481749b637792029cf66591090 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 2.0E-14 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2009 ad7cdc481749b637792029cf66591090 301 SUPERFAMILY SSF53850 96 300 1.94E-36 T 17-10-2018 FORC55_2009 ad7cdc481749b637792029cf66591090 301 Pfam PF03466 LysR substrate binding domain 96 299 6.4E-39 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2009 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:3.40.190.10 98 297 1.7E-55 T 17-10-2018 FORC55_2009 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:3.40.190.10 168 269 1.7E-55 T 17-10-2018 FORC55_2009 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:1.10.10.10 2 89 3.6E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2009 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.9E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2009 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.9E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2009 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.9E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2009 ad7cdc481749b637792029cf66591090 301 SUPERFAMILY SSF46785 4 117 2.62E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1778 cf536be3f5f33e1a25ba2ea54082a819 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 2.1E-77 T 17-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1778 cf536be3f5f33e1a25ba2ea54082a819 264 Gene3D G3DSA:3.30.70.580 1 104 3.0E-40 T 17-10-2018 FORC55_1778 cf536be3f5f33e1a25ba2ea54082a819 264 PIRSF PIRSF001430 1 253 7.2E-78 T 17-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1778 cf536be3f5f33e1a25ba2ea54082a819 264 SUPERFAMILY SSF55120 1 256 3.02E-94 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1778 cf536be3f5f33e1a25ba2ea54082a819 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 8.3E-29 T 17-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1778 cf536be3f5f33e1a25ba2ea54082a819 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.3E-12 T 17-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1778 cf536be3f5f33e1a25ba2ea54082a819 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.504 T 17-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1778 cf536be3f5f33e1a25ba2ea54082a819 264 Gene3D G3DSA:3.30.70.660 105 242 4.2E-50 T 17-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Gene3D G3DSA:1.10.10.10 464 540 2.7E-32 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 8.1E-29 T 17-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 624 45.754 T 17-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 599 610 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 415 428 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 439 447 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 584 599 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 563 575 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Gene3D G3DSA:1.10.601.10 113 460 1.1E-137 T 17-10-2018 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 387 612 1.2E-37 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 415 428 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 584 610 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF04542 Sigma-70 region 2 391 460 1.7E-21 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Gene3D G3DSA:1.10.10.10 541 625 3.4E-37 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF04546 Sigma-70, non-essential region 139 360 1.8E-65 T 17-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 SUPERFAMILY SSF88659 464 537 2.25E-20 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 17-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 SUPERFAMILY SSF88946 115 458 6.15E-97 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF04539 Sigma-70 region 3 470 545 1.3E-28 T 17-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF04545 Sigma-70, region 4 559 612 1.8E-19 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 387 623 2.7E-120 T 17-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 Gene3D G3DSA:1.10.220.120 1 64 3.8E-30 T 17-10-2018 FORC55_2298 2cb7b83afd7d60f4057a7a31bf3482ab 625 SUPERFAMILY SSF88659 521 623 1.31E-25 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 17-10-2018 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 SUPERFAMILY SSF50692 752 951 4.77E-38 T 17-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 PIRSF PIRSF036643 21 581 1.7E-114 T 17-10-2018 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 PIRSF PIRSF036643 786 950 4.4E-16 T 17-10-2018 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 47 1.1E-4 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 17-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 17-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 SUPERFAMILY SSF53706 59 646 1.31E-200 T 17-10-2018 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 1.2E-20 T 17-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 Gene3D G3DSA:3.40.50.740 126 617 3.6E-133 T 17-10-2018 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 Gene3D G3DSA:3.40.228.10 195 394 3.6E-133 T 17-10-2018 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 5.1E-53 T 17-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 Gene3D G3DSA:2.40.40.20 767 951 2.6E-47 T 17-10-2018 FORC55_1311 4832afaa4da5e6249a84a0d3e67c50da 951 SMART SM00926 61 115 3.9E-16 T 17-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 SMART SM00846 127 288 9.8E-54 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 1.0E-117 T 17-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 2.3E-46 T 17-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.4E-19 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 406 421 2.4E-19 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.4E-19 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.4E-19 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.4E-19 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 Gene3D G3DSA:3.40.50.720 129 462 5.9E-115 T 17-10-2018 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 17-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 5.3E-21 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 Gene3D G3DSA:3.30.360.10 287 452 5.9E-115 T 17-10-2018 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 SUPERFAMILY SSF55347 288 451 3.02E-53 T 17-10-2018 FORC55_3458 e47382f15f47975170c1b027d310a5e2 478 SUPERFAMILY SSF51735 128 304 3.77E-44 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2491 f7624b9841fb7f6b4fd572fd0e46f956 365 Pfam PF01699 Sodium/calcium exchanger protein 220 361 2.1E-9 T 17-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 FORC55_2491 f7624b9841fb7f6b4fd572fd0e46f956 365 Pfam PF01699 Sodium/calcium exchanger protein 45 192 9.2E-18 T 17-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 4.1E-174 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 Gene3D G3DSA:1.20.58.180 215 297 2.5E-34 T 17-10-2018 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 SUPERFAMILY SSF55681 8 292 2.19E-134 T 17-10-2018 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.2E-71 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.2E-71 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.2E-71 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.2E-71 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.2E-71 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.2E-71 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 7.1E-150 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.172 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0009 49b5d93aba74d574053ffad1a2fca1e2 305 Gene3D G3DSA:3.30.930.10 1 214 6.4E-111 T 17-10-2018 FORC55_1640 fa8a9484cb4fb767db6e4013fc055489 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 101 27.773 T 17-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS FORC55_1640 fa8a9484cb4fb767db6e4013fc055489 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 3.4E-33 T 17-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 FORC55_1640 fa8a9484cb4fb767db6e4013fc055489 106 Gene3D G3DSA:3.30.1390.10 1 106 4.3E-45 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like FORC55_1640 fa8a9484cb4fb767db6e4013fc055489 106 SUPERFAMILY SSF54736 22 105 4.29E-32 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like FORC55_0151 421f6652f292bf6894b4193b5e9c062b 305 PRINTS PR00810 Bacterial general secretion pathway protein C signature 110 119 4.4E-5 T 17-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 FORC55_0151 421f6652f292bf6894b4193b5e9c062b 305 PRINTS PR00810 Bacterial general secretion pathway protein C signature 259 269 4.4E-5 T 17-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 FORC55_0151 421f6652f292bf6894b4193b5e9c062b 305 Pfam PF11356 Type II secretion system protein C 33 173 1.2E-40 T 17-10-2018 IPR024961 Type II secretion system protein C, N-terminal FORC55_0151 421f6652f292bf6894b4193b5e9c062b 305 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 30 305 3.0E-111 T 17-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 FORC55_0151 421f6652f292bf6894b4193b5e9c062b 305 Gene3D G3DSA:2.30.30.830 107 174 1.9E-28 T 17-10-2018 FORC55_0151 421f6652f292bf6894b4193b5e9c062b 305 Gene3D G3DSA:2.30.42.10 202 305 4.9E-28 T 17-10-2018 FORC55_0151 421f6652f292bf6894b4193b5e9c062b 305 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 243 269 - T 17-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 FORC55_0151 421f6652f292bf6894b4193b5e9c062b 305 SUPERFAMILY SSF50156 210 304 6.92E-18 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 FORC55_0435 abd8229e86896892081e9f7c45d1cbe8 505 Pfam PF05235 CHAD domain 230 396 5.1E-11 T 17-10-2018 IPR007899 CHAD domain FORC55_0435 abd8229e86896892081e9f7c45d1cbe8 505 SUPERFAMILY SSF55154 1 218 2.13E-53 T 17-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 FORC55_0435 abd8229e86896892081e9f7c45d1cbe8 505 SMART SM00880 229 497 5.6E-27 T 17-10-2018 IPR007899 CHAD domain FORC55_0435 abd8229e86896892081e9f7c45d1cbe8 505 Pfam PF01928 CYTH domain 3 197 3.4E-36 T 17-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 FORC55_0435 abd8229e86896892081e9f7c45d1cbe8 505 Gene3D G3DSA:2.40.320.10 1 200 3.3E-36 T 17-10-2018 FORC55_0435 abd8229e86896892081e9f7c45d1cbe8 505 SMART SM01118 2 203 5.8E-44 T 17-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 FORC55_0435 abd8229e86896892081e9f7c45d1cbe8 505 Gene3D G3DSA:1.40.20.10 210 412 8.0E-17 T 17-10-2018 IPR038186 CHAD domain superfamily FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 SUPERFAMILY SSF82714 726 801 5.62E-8 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Gene3D G3DSA:3.30.2090.10 193 285 2.9E-256 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Gene3D G3DSA:1.20.1640.10 523 1022 2.9E-256 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Pfam PF00873 AcrB/AcrD/AcrF family 18 1026 3.4E-168 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 SUPERFAMILY SSF82693 54 149 1.92E-22 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 SUPERFAMILY SSF82693 572 619 8.02E-5 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Gene3D G3DSA:3.30.70.1440 669 870 2.9E-256 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 2.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 2.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 2.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 SUPERFAMILY SSF82866 306 505 5.75E-34 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 SUPERFAMILY SSF82714 198 281 6.67E-11 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Gene3D G3DSA:3.30.2090.10 720 810 2.9E-256 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Gene3D G3DSA:3.30.70.1320 150 342 2.9E-256 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Gene3D G3DSA:3.30.70.1430 54 818 2.9E-256 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Gene3D G3DSA:1.20.1640.10 24 522 2.9E-256 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 Gene3D G3DSA:3.30.70.1430 570 668 2.9E-256 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 SUPERFAMILY SSF82693 150 337 2.22E-17 T 17-10-2018 FORC55_1164 5fb0d65890be239c769e605a7ba59c01 1032 SUPERFAMILY SSF82866 807 1028 1.14E-45 T 17-10-2018 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 Gene3D G3DSA:3.10.290.10 6 75 2.9E-16 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 Pfam PF00849 RNA pseudouridylate synthase 103 248 1.7E-31 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 SMART SM00363 20 80 3.6E-9 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 SUPERFAMILY SSF55174 19 71 6.18E-9 T 17-10-2018 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 SUPERFAMILY SSF55120 97 312 1.22E-65 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 Gene3D G3DSA:3.30.2350.10 95 315 7.9E-80 T 17-10-2018 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 1.0E-91 T 17-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_0815 540a5ab1ca32e13fd5d285144fb04d14 315 Pfam PF01479 S4 domain 20 66 9.6E-10 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 Gene3D G3DSA:3.40.50.300 476 723 2.1E-88 T 17-10-2018 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 Pfam PF03412 Peptidase C39 family 23 117 3.8E-5 T 17-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 27 722 0.0 T 17-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 Gene3D G3DSA:3.90.70.10 26 150 2.3E-9 T 17-10-2018 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 Pfam PF00664 ABC transporter transmembrane region 171 439 2.5E-43 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 Pfam PF00005 ABC transporter 501 650 3.2E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 SUPERFAMILY SSF52540 475 720 9.54E-88 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1360 7176f898598819c82e99f4f936c098ee 723 ProSitePatterns PS00211 ABC transporters family signature. 622 636 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 SMART SM00382 510 696 1.4E-19 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1360 7176f898598819c82e99f4f936c098ee 723 Gene3D G3DSA:1.20.1560.10 154 470 2.1E-70 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1360 7176f898598819c82e99f4f936c098ee 723 SUPERFAMILY SSF90123 155 468 5.89E-63 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1242 df9c35d6d86c1569da0ef1e3d572d11d 350 SUPERFAMILY SSF74650 5 348 5.09E-107 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 FORC55_1242 df9c35d6d86c1569da0ef1e3d572d11d 350 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 16 348 5.2E-140 T 17-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 FORC55_1242 df9c35d6d86c1569da0ef1e3d572d11d 350 PIRSF PIRSF005096 2 350 1.8E-116 T 17-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 FORC55_1242 df9c35d6d86c1569da0ef1e3d572d11d 350 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 174 183 - T 17-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 FORC55_1242 df9c35d6d86c1569da0ef1e3d572d11d 350 Gene3D G3DSA:2.70.98.10 9 350 5.8E-111 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 FORC55_1242 df9c35d6d86c1569da0ef1e3d572d11d 350 Pfam PF01263 Aldose 1-epimerase 21 346 3.9E-89 T 17-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 FORC55_1794 3508f0cc005831c09f2e926e7bfffc77 97 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 2.4E-26 T 17-10-2018 IPR011893 Selenoprotein, Rdx-type FORC55_1794 3508f0cc005831c09f2e926e7bfffc77 97 SUPERFAMILY SSF52833 4 87 5.37E-29 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_1794 3508f0cc005831c09f2e926e7bfffc77 97 Gene3D G3DSA:3.40.30.10 1 97 3.2E-40 T 17-10-2018 FORC55_1794 3508f0cc005831c09f2e926e7bfffc77 97 Pfam PF10262 Rdx family 6 78 1.4E-31 T 17-10-2018 IPR011893 Selenoprotein, Rdx-type FORC55_1054 2caf094540357532c99309b7b61dfc88 782 Pfam PF08497 Radical SAM N-terminal 22 368 1.4E-141 T 17-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal FORC55_1054 2caf094540357532c99309b7b61dfc88 782 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 22 634 7.7E-259 T 17-10-2018 IPR022946 Uncharacterised protein family UPF0313 FORC55_1054 2caf094540357532c99309b7b61dfc88 782 Pfam PF11842 Domain of unknown function (DUF3362) 583 723 3.6E-41 T 17-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal FORC55_1054 2caf094540357532c99309b7b61dfc88 782 Pfam PF04055 Radical SAM superfamily 369 574 5.3E-21 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_1054 2caf094540357532c99309b7b61dfc88 782 SUPERFAMILY SSF102114 366 603 1.57E-9 T 17-10-2018 FORC55_1054 2caf094540357532c99309b7b61dfc88 782 SMART SM00729 365 615 4.1E-4 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_1054 2caf094540357532c99309b7b61dfc88 782 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 369 389 - T 17-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 FORC55_1054 2caf094540357532c99309b7b61dfc88 782 Gene3D G3DSA:3.80.30.20 364 626 4.5E-12 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe FORC55_1054 2caf094540357532c99309b7b61dfc88 782 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 636 48.545 T 17-10-2018 IPR022946 Uncharacterised protein family UPF0313 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 SUPERFAMILY SSF55904 571 719 2.22E-47 T 17-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 2.0E-192 T 17-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 Gene3D G3DSA:3.90.100.10 601 720 2.5E-43 T 17-10-2018 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 SUPERFAMILY SSF53383 109 566 6.95E-126 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 PIRSF PIRSF009393 1 720 1.0E-296 T 17-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 Gene3D G3DSA:3.90.1150.10 421 600 8.8E-73 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 17-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 SUPERFAMILY SSF52172 1 108 4.97E-33 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 5.6E-48 T 17-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 1.1E-21 T 17-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 Gene3D G3DSA:3.40.50.220 1 108 1.6E-21 T 17-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 Gene3D G3DSA:3.40.640.10 109 419 2.7E-85 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3642 f159927df08e8ce877c2dd6ce5cbf5c2 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 17-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 FORC55_1607 5d97200789050063746d3c17eea29f92 206 SUPERFAMILY SSF55821 1 203 1.13E-64 T 17-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily FORC55_1607 5d97200789050063746d3c17eea29f92 206 Pfam PF01300 Telomere recombination 23 198 2.3E-45 T 17-10-2018 IPR006070 YrdC-like domain GO:0003725 FORC55_1607 5d97200789050063746d3c17eea29f92 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.4E-71 T 17-10-2018 IPR006070 YrdC-like domain GO:0003725 FORC55_1607 5d97200789050063746d3c17eea29f92 206 Gene3D G3DSA:3.90.870.10 1 206 6.0E-69 T 17-10-2018 FORC55_1326 b7f9199070ec3f68c80372cfbd06e1fa 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 208 30.062 T 17-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 FORC55_1326 b7f9199070ec3f68c80372cfbd06e1fa 208 Pfam PF04352 ProQ/FINO family 8 115 9.7E-43 T 17-10-2018 IPR016103 ProQ/FinO domain FORC55_1326 b7f9199070ec3f68c80372cfbd06e1fa 208 SMART SM00945 5 119 3.4E-60 T 17-10-2018 IPR016103 ProQ/FinO domain FORC55_1326 b7f9199070ec3f68c80372cfbd06e1fa 208 SUPERFAMILY SSF48657 5 118 4.45E-39 T 17-10-2018 IPR036442 ProQ/FinO domain superfamily FORC55_1326 b7f9199070ec3f68c80372cfbd06e1fa 208 Gene3D G3DSA:1.10.1710.10 1 119 4.4E-25 T 17-10-2018 IPR036442 ProQ/FinO domain superfamily FORC55_1326 b7f9199070ec3f68c80372cfbd06e1fa 208 Pfam PF17516 ProQ C-terminal domain 159 207 1.2E-22 T 17-10-2018 IPR035236 RNA chaperone ProQ, C-terminal FORC55_1611 bd344aaf5b6a30b111e6bb6c611dc74a 332 Gene3D G3DSA:1.20.970.10 10 183 1.4E-123 T 17-10-2018 FORC55_1611 bd344aaf5b6a30b111e6bb6c611dc74a 332 Gene3D G3DSA:3.40.1030.10 67 321 1.4E-123 T 17-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_1611 bd344aaf5b6a30b111e6bb6c611dc74a 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 3.8E-128 T 17-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 FORC55_1611 bd344aaf5b6a30b111e6bb6c611dc74a 332 SUPERFAMILY SSF47648 1 67 4.71E-20 T 17-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_1611 bd344aaf5b6a30b111e6bb6c611dc74a 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.482 T 17-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 FORC55_1611 bd344aaf5b6a30b111e6bb6c611dc74a 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 6.7E-102 T 17-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_1611 bd344aaf5b6a30b111e6bb6c611dc74a 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 63 3.9E-17 T 17-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_1611 bd344aaf5b6a30b111e6bb6c611dc74a 332 SUPERFAMILY SSF52418 70 329 1.31E-92 T 17-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0957 183403bec95c396c9fe9d53f5b1d45ae 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 329 40.589 T 17-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 FORC55_0957 183403bec95c396c9fe9d53f5b1d45ae 336 SUPERFAMILY SSF52540 53 184 9.3E-11 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0957 183403bec95c396c9fe9d53f5b1d45ae 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 325 4.9E-97 T 17-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 FORC55_0957 183403bec95c396c9fe9d53f5b1d45ae 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 322 1.2E-113 T 17-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 FORC55_2653 2708430f1f6167c8dd63cd0ab31e0ecd 129 Pfam PF03899 ATP synthase I chain 15 111 4.0E-17 T 17-10-2018 IPR005598 ATP synthase protein I FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 1.1E-23 T 17-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 508 2.7E-24 T 17-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 SUPERFAMILY SSF53686 10 360 1.7E-105 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 Gene3D G3DSA:3.40.50.1100 20 322 9.4E-134 T 17-10-2018 FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 SUPERFAMILY SSF55021 415 508 2.08E-26 T 17-10-2018 FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 SUPERFAMILY SSF55021 332 418 3.2E-27 T 17-10-2018 FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 17-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 3.5E-250 T 17-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 1.0E-82 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 Gene3D G3DSA:3.40.1020.10 333 510 5.5E-71 T 17-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 FORC55_0015 8f562cdf154261487a0843c5c13f3e1f 510 Gene3D G3DSA:3.40.50.1100 56 152 9.4E-134 T 17-10-2018 FORC55_2427 81cf98e593db87d78944ce1bbe5e784d 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 4.8E-47 T 17-10-2018 IPR017462 Sulphur relay, TusC/DsrF FORC55_2427 81cf98e593db87d78944ce1bbe5e784d 118 Gene3D G3DSA:3.40.1260.10 1 118 1.4E-36 T 17-10-2018 IPR027396 DsrEFH-like FORC55_2427 81cf98e593db87d78944ce1bbe5e784d 118 SUPERFAMILY SSF75169 2 118 3.14E-37 T 17-10-2018 IPR027396 DsrEFH-like FORC55_2427 81cf98e593db87d78944ce1bbe5e784d 118 Pfam PF02635 DsrE/DsrF-like family 3 118 1.5E-26 T 17-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 5.1E-6 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 5.1E-6 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 Pfam PF12833 Helix-turn-helix domain 182 259 1.2E-19 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 Pfam PF02311 AraC-like ligand binding domain 31 144 1.8E-4 T 17-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 SUPERFAMILY SSF51182 17 185 2.49E-11 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 SUPERFAMILY SSF46689 213 260 5.38E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 Gene3D G3DSA:2.60.120.10 3 95 1.8E-5 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 Gene3D G3DSA:1.10.10.60 156 261 2.7E-23 T 17-10-2018 FORC55_3524 dc3262f3290e1a147b64d14201a8e5e3 263 SMART SM00342 176 258 2.1E-21 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_2168 71c3140000f209b017f794ef5f6d34a2 175 PIRSF PIRSF025550 1 174 1.6E-86 T 17-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT FORC55_2168 71c3140000f209b017f794ef5f6d34a2 175 Gene3D G3DSA:3.30.1050.10 25 139 1.4E-6 T 17-10-2018 IPR036527 SCP2 sterol-binding domain superfamily FORC55_2168 71c3140000f209b017f794ef5f6d34a2 175 Pfam PF02036 SCP-2 sterol transfer family 44 134 2.2E-18 T 17-10-2018 IPR003033 SCP2 sterol-binding domain FORC55_2168 71c3140000f209b017f794ef5f6d34a2 175 SUPERFAMILY SSF55718 42 139 8.95E-21 T 17-10-2018 IPR036527 SCP2 sterol-binding domain superfamily FORC55_0086 fbaef1d807d20adb814c49340a5e9786 255 Gene3D G3DSA:3.20.20.140 1 254 3.7E-78 T 17-10-2018 FORC55_0086 fbaef1d807d20adb814c49340a5e9786 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 2.3E-69 T 17-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 FORC55_0086 fbaef1d807d20adb814c49340a5e9786 255 Pfam PF01026 TatD related DNase 2 251 3.5E-65 T 17-10-2018 IPR001130 TatD family GO:0016788 FORC55_0086 fbaef1d807d20adb814c49340a5e9786 255 PIRSF PIRSF005902 1 255 2.0E-70 T 17-10-2018 IPR001130 TatD family GO:0016788 FORC55_0086 fbaef1d807d20adb814c49340a5e9786 255 SUPERFAMILY SSF51556 1 253 3.12E-79 T 17-10-2018 IPR032466 Metal-dependent hydrolase FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.2E-128 T 17-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 PIRSF PIRSF000102 1 308 2.8E-60 T 17-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 17-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.1E-47 T 17-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 Gene3D G3DSA:3.40.50.720 1 146 2.8E-65 T 17-10-2018 FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 Gene3D G3DSA:3.90.110.10 147 311 1.6E-53 T 17-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 9.1E-47 T 17-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.846 T 17-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 SUPERFAMILY SSF51735 1 145 4.25E-39 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2356 040a6b3bc3726d9b108e53fa5abad373 311 SUPERFAMILY SSF56327 146 310 1.05E-41 T 17-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 FORC55_3234 072cf99509ba35200211bca1f4bfa8f8 301 SUPERFAMILY SSF103481 200 299 1.96E-7 T 17-10-2018 FORC55_3234 072cf99509ba35200211bca1f4bfa8f8 301 Pfam PF00892 EamA-like transporter family 152 298 1.4E-8 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3234 072cf99509ba35200211bca1f4bfa8f8 301 Pfam PF00892 EamA-like transporter family 5 136 1.8E-8 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3234 072cf99509ba35200211bca1f4bfa8f8 301 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 5 297 1.4E-122 T 17-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative FORC55_3234 072cf99509ba35200211bca1f4bfa8f8 301 SUPERFAMILY SSF103481 49 141 2.62E-8 T 17-10-2018 FORC55_2615 1d804bc6902e30937d054f3a7e912bf3 267 SUPERFAMILY SSF51215 7 143 7.72E-18 T 17-10-2018 IPR037923 Transcription regulator HTH-like FORC55_2615 1d804bc6902e30937d054f3a7e912bf3 267 SUPERFAMILY SSF46689 168 216 2.37E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2615 1d804bc6902e30937d054f3a7e912bf3 267 Pfam PF02311 AraC-like ligand binding domain 12 143 3.6E-27 T 17-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 FORC55_2615 1d804bc6902e30937d054f3a7e912bf3 267 SUPERFAMILY SSF46689 218 263 5.82E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2615 1d804bc6902e30937d054f3a7e912bf3 267 Gene3D G3DSA:1.10.10.60 169 224 9.9E-17 T 17-10-2018 FORC55_2615 1d804bc6902e30937d054f3a7e912bf3 267 Gene3D G3DSA:1.10.10.60 225 266 1.3E-11 T 17-10-2018 FORC55_2615 1d804bc6902e30937d054f3a7e912bf3 267 Pfam PF12833 Helix-turn-helix domain 188 261 2.0E-24 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_2615 1d804bc6902e30937d054f3a7e912bf3 267 SMART SM00342 182 264 5.4E-29 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 Pfam PF01546 Peptidase family M20/M25/M40 65 373 7.3E-45 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.28 T 17-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 8.3E-186 T 17-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 Pfam PF07687 Peptidase dimerisation domain 177 284 7.5E-24 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 Gene3D G3DSA:3.30.70.360 181 294 7.2E-129 T 17-10-2018 FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 17-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 SUPERFAMILY SSF53187 6 376 3.27E-66 T 17-10-2018 FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 Gene3D G3DSA:3.40.630.10 9 364 7.2E-129 T 17-10-2018 FORC55_0700 9dda49b60607f094511a5236e7f9d65f 377 SUPERFAMILY SSF55031 181 290 9.72E-29 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 Gene3D G3DSA:1.20.20.10 2 77 5.3E-28 T 17-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 SUPERFAMILY SSF81333 3 78 3.4E-19 T 17-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-6 T 17-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-6 T 17-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-6 T 17-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 3.5E-30 T 17-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 17-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 Pfam PF00137 ATP synthase subunit C 10 72 3.2E-10 T 17-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 FORC55_2651 7b6f2e465d7808c2a771ecd3991fb9b4 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.368 T 17-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_0494 b8afcd15aa539bc5b6eaf5ff86f1848b 317 Pfam PF03186 CobD/Cbib protein 19 289 1.9E-36 T 17-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 Gene3D G3DSA:1.20.1640.10 105 298 1.7E-12 T 17-10-2018 FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.887 T 17-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 5.7E-88 T 17-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 3.0E-57 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 SUPERFAMILY SSF82866 74 293 3.53E-41 T 17-10-2018 FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.5E-32 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.5E-32 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.5E-32 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.5E-32 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 17-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site FORC55_2000 937f03a57ef609d48176cd1ca58d5d91 315 Pfam PF02355 Protein export membrane protein 111 292 2.5E-71 T 17-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial FORC55_2602 5501e17ad8a6518a0671fd5d6f9b17ef 481 SUPERFAMILY SSF55604 9 80 1.03E-17 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_2602 5501e17ad8a6518a0671fd5d6f9b17ef 481 Pfam PF02378 Phosphotransferase system, EIIC 127 408 1.3E-30 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_2602 5501e17ad8a6518a0671fd5d6f9b17ef 481 Gene3D G3DSA:3.30.1360.60 2 79 6.6E-19 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_2602 5501e17ad8a6518a0671fd5d6f9b17ef 481 Pfam PF00367 phosphotransferase system, EIIB 11 43 2.3E-10 T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_2602 5501e17ad8a6518a0671fd5d6f9b17ef 481 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_1237 b0b79db8dc78921d58b1e9d021632454 338 SMART SM00267 153 321 7.3E-54 T 17-10-2018 IPR000160 GGDEF domain FORC55_1237 b0b79db8dc78921d58b1e9d021632454 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 320 8.1E-41 T 17-10-2018 IPR000160 GGDEF domain FORC55_1237 b0b79db8dc78921d58b1e9d021632454 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 317 1.3E-36 T 17-10-2018 IPR000160 GGDEF domain FORC55_1237 b0b79db8dc78921d58b1e9d021632454 338 SUPERFAMILY SSF55073 169 322 1.1E-40 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1237 b0b79db8dc78921d58b1e9d021632454 338 Gene3D G3DSA:3.30.70.270 162 335 2.7E-47 T 17-10-2018 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 PRINTS PR00207 Flagellin signature 111 134 1.1E-24 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 PRINTS PR00207 Flagellin signature 76 95 1.1E-24 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 PRINTS PR00207 Flagellin signature 37 54 1.1E-24 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 Pfam PF07196 Flagellin hook IN motif 197 246 1.6E-7 T 17-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 Gene3D G3DSA:1.20.1330.10 287 331 1.2E-22 T 17-10-2018 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 Gene3D G3DSA:1.20.1330.10 59 172 2.9E-53 T 17-10-2018 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.1E-42 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 Gene3D G3DSA:2.170.280.10 190 286 1.2E-22 T 17-10-2018 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 Gene3D G3DSA:1.10.8.410 332 379 6.1E-22 T 17-10-2018 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 2.4E-26 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0667 e23395717eb2981a5a6df995f6db4de8 379 SUPERFAMILY SSF64518 1 379 1.24E-98 T 17-10-2018 FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 Gene3D G3DSA:1.10.8.60 166 241 6.4E-24 T 17-10-2018 FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 SMART SM00382 50 166 1.0E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.5E-17 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 Gene3D G3DSA:3.40.50.300 2 165 1.2E-48 T 17-10-2018 FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.5E-66 T 17-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 Gene3D G3DSA:1.10.3710.10 347 448 1.8E-37 T 17-10-2018 FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 SUPERFAMILY SSF48019 253 435 5.33E-72 T 17-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 Pfam PF16193 AAA C-terminal domain 192 268 2.9E-20 T 17-10-2018 IPR032423 AAA C-terminal domain FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 Gene3D G3DSA:1.20.272.10 242 346 4.0E-43 T 17-10-2018 FORC55_1675 9411104d3cd700ef86bbc121b593b965 449 SUPERFAMILY SSF52540 11 235 1.6E-44 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 17-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 SUPERFAMILY SSF48557 4 449 2.67E-109 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 Gene3D G3DSA:1.10.275.10 1 117 3.5E-50 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.2E-18 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 1.2E-18 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 1.2E-18 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.2E-18 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.3E-51 T 17-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 Gene3D G3DSA:1.10.40.30 383 446 1.4E-158 T 17-10-2018 FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 Pfam PF00206 Lyase 14 313 7.1E-73 T 17-10-2018 IPR022761 Fumarate lyase, N-terminal FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 4.6E-151 T 17-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_1658 c01fa9f1eb02decf34e192cdfe0e732a 456 Gene3D G3DSA:1.20.200.10 118 447 1.4E-158 T 17-10-2018 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 SMART SM00091 6 74 5.2E-6 T 17-10-2018 IPR000014 PAS domain FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 SUPERFAMILY SSF55874 199 349 1.44E-36 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 SUPERFAMILY SSF47384 127 194 3.53E-13 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 Gene3D G3DSA:3.30.450.20 2 114 1.1E-25 T 17-10-2018 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 SMART SM00387 235 352 8.3E-32 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 SUPERFAMILY SSF55785 19 123 4.19E-8 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 SMART SM00388 131 196 4.9E-14 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 Gene3D G3DSA:3.30.565.10 194 350 6.0E-41 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 192 1.5E-14 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 Pfam PF00989 PAS fold 9 104 2.0E-15 T 17-10-2018 IPR013767 PAS fold GO:0006355 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 349 2.3E-18 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 Gene3D G3DSA:1.10.287.130 116 193 1.2E-13 T 17-10-2018 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 3.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 331 3.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0138 cd6919ceb7589edb7ee36f7e3bbea787 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 349 3.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0523 0de93f1f29e90042eccc7ef48ae3f6a7 406 SUPERFAMILY SSF53649 1 406 1.31E-68 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 FORC55_0523 0de93f1f29e90042eccc7ef48ae3f6a7 406 SUPERFAMILY SSF143856 118 234 2.09E-47 T 17-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 FORC55_0523 0de93f1f29e90042eccc7ef48ae3f6a7 406 Gene3D G3DSA:3.40.720.10 3 406 8.0E-149 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 FORC55_0523 0de93f1f29e90042eccc7ef48ae3f6a7 406 Pfam PF01676 Metalloenzyme superfamily 2 397 5.3E-43 T 17-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 FORC55_0523 0de93f1f29e90042eccc7ef48ae3f6a7 406 PIRSF PIRSF001491 1 406 5.8E-160 T 17-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 FORC55_0523 0de93f1f29e90042eccc7ef48ae3f6a7 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.078 T 17-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 FORC55_0523 0de93f1f29e90042eccc7ef48ae3f6a7 406 Gene3D G3DSA:3.30.70.1250 116 237 8.0E-149 T 17-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 FORC55_0523 0de93f1f29e90042eccc7ef48ae3f6a7 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 1.6E-177 T 17-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 Gene3D G3DSA:2.20.28.60 1 50 4.4E-26 T 17-10-2018 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.5E-239 T 17-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 241 269 3.6E-55 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 296 316 3.6E-55 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 219 234 3.6E-55 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 359 375 3.6E-55 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 165 178 3.6E-55 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 379 393 3.6E-55 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 17-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 Gene3D G3DSA:1.10.230.10 268 376 1.2E-150 T 17-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain FORC55_0755 e1abdf197616de611b9481d051551c8b 429 SUPERFAMILY SSF48256 4 428 8.24E-171 T 17-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 PIRSF PIRSF001369 38 429 8.1E-174 T 17-10-2018 IPR024176 Citrate synthase, bacterial-type FORC55_0755 e1abdf197616de611b9481d051551c8b 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.6E-136 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_0755 e1abdf197616de611b9481d051551c8b 429 Gene3D G3DSA:1.10.580.10 57 411 1.2E-150 T 17-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 FORC55_0751 72977802afb491125ada3cac7fd47827 177 PIRSF PIRSF019401 1 68 3.5E-17 T 17-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 FORC55_0751 72977802afb491125ada3cac7fd47827 177 PIRSF PIRSF019401 45 177 3.4E-36 T 17-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 FORC55_0751 72977802afb491125ada3cac7fd47827 177 Pfam PF03925 SeqA protein C-terminal domain 68 175 1.6E-45 T 17-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 FORC55_0751 72977802afb491125ada3cac7fd47827 177 Gene3D G3DSA:1.20.1380.10 62 177 2.3E-48 T 17-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 FORC55_0751 72977802afb491125ada3cac7fd47827 177 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.2E-23 T 17-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal FORC55_0751 72977802afb491125ada3cac7fd47827 177 Gene3D G3DSA:1.10.1220.10 1 39 1.7E-23 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 FORC55_0751 72977802afb491125ada3cac7fd47827 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 40.866 T 17-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 FORC55_0751 72977802afb491125ada3cac7fd47827 177 SUPERFAMILY SSF47598 1 34 4.0E-13 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 FORC55_0751 72977802afb491125ada3cac7fd47827 177 SUPERFAMILY SSF82808 63 176 9.68E-49 T 17-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 FORC55_2229 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 FORC55_2229 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 FORC55_2229 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 FORC55_2229 021be6b09b391dc380864082c8f66045 256 PIRSF PIRSF006648 8 252 1.2E-25 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 FORC55_2229 021be6b09b391dc380864082c8f66045 256 Pfam PF01061 ABC-2 type transporter 8 218 5.8E-40 T 17-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 FORC55_0567 a1c8d9bfc0ff3ad6cb375f096a0daa8a 428 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 428 43.114 T 17-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 FORC55_0567 a1c8d9bfc0ff3ad6cb375f096a0daa8a 428 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 2 238 2.1E-103 T 17-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 FORC55_0567 a1c8d9bfc0ff3ad6cb375f096a0daa8a 428 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 428 1.9E-205 T 17-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 FORC55_0567 a1c8d9bfc0ff3ad6cb375f096a0daa8a 428 Pfam PF11973 NQRA C-terminal domain 243 292 4.6E-21 T 17-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 FORC55_2691 bdb58b4bb511429ae7380669c4dd1c37 405 SUPERFAMILY SSF52540 108 369 2.53E-32 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2691 bdb58b4bb511429ae7380669c4dd1c37 405 Pfam PF13614 AAA domain 110 296 8.5E-23 T 17-10-2018 IPR025669 AAA domain FORC55_2691 bdb58b4bb511429ae7380669c4dd1c37 405 Gene3D G3DSA:3.40.50.300 107 398 2.8E-56 T 17-10-2018 FORC55_2691 bdb58b4bb511429ae7380669c4dd1c37 405 Gene3D G3DSA:1.10.1660.30 36 102 1.0E-5 T 17-10-2018 FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 SUPERFAMILY SSF52540 34 352 2.84E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 SMART SM00487 22 222 4.4E-56 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 Gene3D G3DSA:3.40.50.300 1 211 1.2E-70 T 17-10-2018 FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 Gene3D G3DSA:3.40.50.300 217 423 4.5E-51 T 17-10-2018 FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 Pfam PF00271 Helicase conserved C-terminal domain 234 341 6.1E-32 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 Pfam PF00270 DEAD/DEAH box helicase 27 195 2.4E-45 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 420 51.411 T 17-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_2075 c306c0db74f3c03d73eb9c05489ecedf 423 SMART SM00490 260 341 2.8E-32 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_3389 7dbfbd631db3c55f81cb08f3545f470e 229 SUPERFAMILY SSF161098 10 202 8.63E-37 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3389 7dbfbd631db3c55f81cb08f3545f470e 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 1.6E-18 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3389 7dbfbd631db3c55f81cb08f3545f470e 229 Gene3D G3DSA:1.10.3720.10 2 218 6.4E-46 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3389 7dbfbd631db3c55f81cb08f3545f470e 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 4.1E-17 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_1695 0f383aa9c78c804fa4ab01e3cf74f541 447 Gene3D G3DSA:1.10.3210.10 193 390 1.4E-29 T 17-10-2018 FORC55_1695 0f383aa9c78c804fa4ab01e3cf74f541 447 SUPERFAMILY SSF52172 10 162 3.98E-33 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1695 0f383aa9c78c804fa4ab01e3cf74f541 447 SMART SM00448 11 122 5.7E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1695 0f383aa9c78c804fa4ab01e3cf74f541 447 Pfam PF13487 HD domain 283 331 2.0E-12 T 17-10-2018 FORC55_1695 0f383aa9c78c804fa4ab01e3cf74f541 447 Pfam PF00072 Response regulator receiver domain 13 120 1.8E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1695 0f383aa9c78c804fa4ab01e3cf74f541 447 Gene3D G3DSA:3.40.50.2300 2 148 4.2E-33 T 17-10-2018 FORC55_1695 0f383aa9c78c804fa4ab01e3cf74f541 447 SUPERFAMILY SSF109604 211 379 6.28E-13 T 17-10-2018 FORC55_0757 65ca5328931af58363cd98ec92099947 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 99 5.3E-6 T 17-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0757 65ca5328931af58363cd98ec92099947 114 SUPERFAMILY SSF81343 4 113 6.1E-25 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0757 65ca5328931af58363cd98ec92099947 114 PIRSF PIRSF000169 1 114 2.9E-36 T 17-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 FORC55_0757 65ca5328931af58363cd98ec92099947 114 Gene3D G3DSA:1.20.1300.10 1 114 1.6E-28 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0757 65ca5328931af58363cd98ec92099947 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.5E-32 T 17-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 FORC55_2287 1d1190c2c8563c612ff84a69cceb444b 267 Pfam PF02673 Bacitracin resistance protein BacA 7 258 6.9E-82 T 17-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 FORC55_2287 1d1190c2c8563c612ff84a69cceb444b 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.49 T 17-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 FORC55_2287 1d1190c2c8563c612ff84a69cceb444b 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 2.4E-73 T 17-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 FORC55_0875 ba4a1bb377e5f49b6275932b23aee939 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 1.2E-34 T 17-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 FORC55_0875 ba4a1bb377e5f49b6275932b23aee939 87 SUPERFAMILY SSF55229 33 85 1.83E-16 T 17-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 FORC55_0875 ba4a1bb377e5f49b6275932b23aee939 87 Gene3D G3DSA:3.30.1070.10 1 84 3.1E-26 T 17-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 FORC55_0875 ba4a1bb377e5f49b6275932b23aee939 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 2.2E-23 T 17-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 FORC55_0875 ba4a1bb377e5f49b6275932b23aee939 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.75 T 17-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 FORC55_1868 9319943e8d44fe85bec648c75f33a7f5 281 Gene3D G3DSA:3.30.1130.10 143 281 1.2E-64 T 17-10-2018 FORC55_1868 9319943e8d44fe85bec648c75f33a7f5 281 SUPERFAMILY SSF55620 184 264 2.89E-9 T 17-10-2018 FORC55_1868 9319943e8d44fe85bec648c75f33a7f5 281 Gene3D G3DSA:3.30.1130.10 21 138 5.7E-48 T 17-10-2018 FORC55_1868 9319943e8d44fe85bec648c75f33a7f5 281 Pfam PF14489 QueF-like protein 194 270 1.8E-26 T 17-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 FORC55_1868 9319943e8d44fe85bec648c75f33a7f5 281 PIRSF PIRSF004750 6 281 1.8E-130 T 17-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 FORC55_1868 9319943e8d44fe85bec648c75f33a7f5 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 163.804 T 17-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 FORC55_1868 9319943e8d44fe85bec648c75f33a7f5 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 1.4E-49 T 17-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 FORC55_1868 9319943e8d44fe85bec648c75f33a7f5 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 2.6E-130 T 17-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 Gene3D G3DSA:3.40.50.150 78 276 4.5E-63 T 17-10-2018 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 SUPERFAMILY SSF47757 6 78 4.05E-19 T 17-10-2018 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 Gene3D G3DSA:1.10.155.10 1 77 2.3E-21 T 17-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily FORC55_3666 c63ef43af395d0e93850790942b895bc 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 66 4.0E-13 T 17-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal FORC55_3666 c63ef43af395d0e93850790942b895bc 276 SUPERFAMILY SSF53335 79 274 1.13E-54 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_3666 c63ef43af395d0e93850790942b895bc 276 SMART SM00138 13 276 6.8E-88 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 2.2E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 2.2E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 2.2E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 2.2E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 PRINTS PR00996 Glutamate methyltransferase family signature 35 48 2.2E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 2.2E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_3666 c63ef43af395d0e93850790942b895bc 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 79 273 1.5E-59 T 17-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal FORC55_3666 c63ef43af395d0e93850790942b895bc 276 PIRSF PIRSF000410 1 276 2.7E-106 T 17-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR FORC55_3581 7b0ed975ddda6a6f9473aaff180be1cd 172 Gene3D G3DSA:1.10.357.10 46 172 1.5E-16 T 17-10-2018 FORC55_3581 7b0ed975ddda6a6f9473aaff180be1cd 172 SUPERFAMILY SSF46689 2 58 1.03E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3581 7b0ed975ddda6a6f9473aaff180be1cd 172 Pfam PF16925 Bacterial transcriptional repressor C-terminal 62 146 1.3E-8 T 17-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal FORC55_3581 7b0ed975ddda6a6f9473aaff180be1cd 172 Gene3D G3DSA:1.10.10.60 1 45 3.4E-12 T 17-10-2018 FORC55_3581 7b0ed975ddda6a6f9473aaff180be1cd 172 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 38 2.2E-5 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_3581 7b0ed975ddda6a6f9473aaff180be1cd 172 ProSitePatterns PS01081 TetR-type HTH domain signature. 4 35 - T 17-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site FORC55_3581 7b0ed975ddda6a6f9473aaff180be1cd 172 SUPERFAMILY SSF48498 59 171 4.15E-22 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily FORC55_2400 459189837382f952cb35ceb2e48783fc 444 Pfam PF00999 Sodium/hydrogen exchanger family 23 416 8.0E-57 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 Gene3D G3DSA:3.40.190.10 83 177 1.5E-5 T 17-10-2018 FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 Gene3D G3DSA:1.10.10.10 1 82 1.0E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 SUPERFAMILY SSF53850 91 275 8.51E-16 T 17-10-2018 FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 Pfam PF03466 LysR substrate binding domain 91 265 2.5E-10 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 SUPERFAMILY SSF46785 1 81 7.72E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.2E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3599 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0242 c1a4e1831f517c4ec668b715f09cea17 262 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 43.339 T 17-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_0242 c1a4e1831f517c4ec668b715f09cea17 262 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 3.0E-64 T 17-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_0242 c1a4e1831f517c4ec668b715f09cea17 262 Pfam PF00696 Amino acid kinase family 9 238 4.4E-35 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_0242 c1a4e1831f517c4ec668b715f09cea17 262 SUPERFAMILY SSF53633 9 262 9.82E-59 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0242 c1a4e1831f517c4ec668b715f09cea17 262 PIRSF PIRSF000728 1 261 4.0E-70 T 17-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_0242 c1a4e1831f517c4ec668b715f09cea17 262 Gene3D G3DSA:3.40.1160.10 5 260 4.4E-66 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 Gene3D G3DSA:3.30.565.10 273 431 4.9E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 264 5.2E-8 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 7.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 7.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 7.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 7.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 426 1.2E-20 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 SUPERFAMILY SSF47384 177 222 3.53E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 SUPERFAMILY SSF55874 268 426 1.31E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 SMART SM00387 312 428 1.0E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1697 6aba782f74d94484e4b0a8a15f4feb13 434 Gene3D G3DSA:1.10.287.130 171 266 5.8E-19 T 17-10-2018 FORC55_1150 89520ff817defbb559b60910324c9d27 301 Gene3D G3DSA:3.10.310.20 187 301 3.5E-22 T 17-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 FORC55_1150 89520ff817defbb559b60910324c9d27 301 Gene3D G3DSA:3.90.1640.10 1 186 4.1E-63 T 17-10-2018 FORC55_1150 89520ff817defbb559b60910324c9d27 301 Pfam PF01368 DHH family 2 142 2.9E-21 T 17-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 FORC55_1150 89520ff817defbb559b60910324c9d27 301 SMART SM01131 178 300 2.6E-35 T 17-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 FORC55_1150 89520ff817defbb559b60910324c9d27 301 SUPERFAMILY SSF64182 1 298 3.92E-66 T 17-10-2018 IPR038763 DHH phosphoesterase superfamily FORC55_1150 89520ff817defbb559b60910324c9d27 301 Pfam PF02833 DHHA2 domain 180 297 1.0E-14 T 17-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.7E-42 T 17-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 26.088 T 17-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 Pfam PF00226 DnaJ domain 3 70 1.7E-6 T 17-10-2018 IPR001623 DnaJ domain FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 SUPERFAMILY SSF46565 1 74 3.4E-17 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 SMART SM00271 1 66 2.6E-9 T 17-10-2018 IPR001623 DnaJ domain FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 Gene3D G3DSA:1.20.1280.20 80 171 3.6E-30 T 17-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 Gene3D G3DSA:1.10.287.110 1 79 2.3E-23 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 4.5E-19 T 17-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_1992 9da6beb4c3369124d62370081c110ea3 171 SUPERFAMILY SSF47144 78 170 3.4E-25 T 17-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_2890 964a255ca3717feb27c74d0384845fda 401 SUPERFAMILY SSF103473 9 384 6.02E-55 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_2890 964a255ca3717feb27c74d0384845fda 401 Pfam PF07690 Major Facilitator Superfamily 13 354 1.7E-40 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_2890 964a255ca3717feb27c74d0384845fda 401 Gene3D G3DSA:1.20.1720.10 10 384 2.1E-96 T 17-10-2018 FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 SMART SM00490 259 340 3.7E-34 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 Gene3D G3DSA:3.40.50.300 1 211 5.8E-73 T 17-10-2018 FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 Gene3D G3DSA:3.30.70.330 485 554 5.0E-11 T 17-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 556 41.913 T 17-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 SMART SM00487 25 223 1.5E-60 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 Pfam PF00271 Helicase conserved C-terminal domain 232 340 2.7E-29 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 Pfam PF00270 DEAD/DEAH box helicase 30 196 3.0E-49 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 SUPERFAMILY SSF52540 74 361 1.3E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 Gene3D G3DSA:3.40.50.300 215 433 1.6E-51 T 17-10-2018 FORC55_3424 b929ab793e58cd9b119fc92757a53dd8 643 Pfam PF03880 DbpA RNA binding domain 484 551 2.6E-17 T 17-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain FORC55_2321 478b09f4d463d8560d65523662fda6ff 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.8E-51 T 17-10-2018 IPR003774 Protein of unknown function UPF0301 FORC55_2321 478b09f4d463d8560d65523662fda6ff 187 Gene3D G3DSA:3.40.1740.10 1 187 1.6E-70 T 17-10-2018 FORC55_2321 478b09f4d463d8560d65523662fda6ff 187 SUPERFAMILY SSF143456 1 187 1.57E-67 T 17-10-2018 FORC55_2321 478b09f4d463d8560d65523662fda6ff 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.264 T 17-10-2018 IPR003774 Protein of unknown function UPF0301 FORC55_2465 0ec7e6a721e11516a11067b040212628 320 SUPERFAMILY SSF55681 68 268 2.84E-61 T 17-10-2018 FORC55_2465 0ec7e6a721e11516a11067b040212628 320 SUPERFAMILY SSF46785 4 60 3.27E-11 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2465 0ec7e6a721e11516a11067b040212628 320 Gene3D G3DSA:1.10.10.10 1 64 2.5E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2465 0ec7e6a721e11516a11067b040212628 320 SUPERFAMILY SSF50037 271 317 4.49E-10 T 17-10-2018 IPR008988 Transcriptional repressor, C-terminal FORC55_2465 0ec7e6a721e11516a11067b040212628 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 8.2E-12 T 17-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 FORC55_2465 0ec7e6a721e11516a11067b040212628 320 Gene3D G3DSA:3.30.930.10 65 270 1.2E-66 T 17-10-2018 FORC55_2465 0ec7e6a721e11516a11067b040212628 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.739 T 17-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 FORC55_2465 0ec7e6a721e11516a11067b040212628 320 Pfam PF08279 HTH domain 8 59 2.1E-10 T 17-10-2018 IPR013196 Helix-turn-helix, type 11 FORC55_2465 0ec7e6a721e11516a11067b040212628 320 Gene3D G3DSA:2.30.30.100 271 313 4.9E-20 T 17-10-2018 FORC55_2465 0ec7e6a721e11516a11067b040212628 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 9.8E-68 T 17-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 FORC55_2465 0ec7e6a721e11516a11067b040212628 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 207 1.4E-19 T 17-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 Gene3D G3DSA:3.40.50.720 266 562 1.2E-109 T 17-10-2018 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.399 T 17-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 SMART SM01274 78 258 3.5E-107 T 17-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 SUPERFAMILY SSF53223 4 267 5.76E-109 T 17-10-2018 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 17-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 SMART SM00919 268 528 5.2E-133 T 17-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 PIRSF PIRSF000106 2 560 4.4E-225 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 3.2E-104 T 17-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 144 173 2.3E-72 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 264 280 2.3E-72 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 84 108 2.3E-72 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 295 311 2.3E-72 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 180 202 2.3E-72 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 239 257 2.3E-72 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 405 421 2.3E-72 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 Gene3D G3DSA:3.40.50.10380 13 265 6.1E-115 T 17-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 2.9E-78 T 17-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 FORC55_1597 fe86aa131a1e11ddf234b73e19db647a 562 SUPERFAMILY SSF51735 268 559 2.93E-94 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 370 3.1E-69 T 17-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 12 271 1.6E-180 T 17-10-2018 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 6 234 1.6E-180 T 17-10-2018 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 17-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 9.4E-47 T 17-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 382 59.32 T 17-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 104 373 1.6E-180 T 17-10-2018 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 234 383 9.03E-71 T 17-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 112 233 4.32E-53 T 17-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 17-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 4.6E-43 T 17-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 380 1.3E-199 T 17-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 PIRSF PIRSF000497 1 382 6.0E-176 T 17-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_2316 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 4 110 2.51E-47 T 17-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 FORC55_1496 dc9e120b580240e295c2b09bc4206009 543 SMART SM00304 203 256 1.3E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1496 dc9e120b580240e295c2b09bc4206009 543 SUPERFAMILY SSF58104 224 537 9.68E-64 T 17-10-2018 FORC55_1496 dc9e120b580240e295c2b09bc4206009 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 497 6.3E-39 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1496 dc9e120b580240e295c2b09bc4206009 543 Gene3D G3DSA:1.10.287.950 203 534 1.6E-63 T 17-10-2018 FORC55_1496 dc9e120b580240e295c2b09bc4206009 543 SMART SM00283 271 532 6.6E-50 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1496 dc9e120b580240e295c2b09bc4206009 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 1.2E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1496 dc9e120b580240e295c2b09bc4206009 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 1.2E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1496 dc9e120b580240e295c2b09bc4206009 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.2E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 SUPERFAMILY SSF158472 160 209 2.22E-5 T 17-10-2018 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 3.8E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 SMART SM00304 159 211 7.3E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 SMART SM00388 212 277 2.4E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 428 8.8E-21 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 SUPERFAMILY SSF47384 195 277 8.83E-15 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 Gene3D G3DSA:3.30.565.10 282 433 1.5E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 Gene3D G3DSA:1.10.287.130 163 278 3.1E-21 T 17-10-2018 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 SMART SM00387 320 430 4.1E-34 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 1.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 1.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 1.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1475 26b581e5fd5d362586c87725ae0e175d 440 SUPERFAMILY SSF55874 266 431 4.45E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1678 0a37f3825679eb13e4a27b5b7ee176f4 308 SUPERFAMILY SSF51395 1 298 2.93E-67 T 17-10-2018 FORC55_1678 0a37f3825679eb13e4a27b5b7ee176f4 308 PIRSF PIRSF006621 1 306 1.8E-68 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_1678 0a37f3825679eb13e4a27b5b7ee176f4 308 Pfam PF01207 Dihydrouridine synthase (Dus) 1 275 4.4E-71 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_1678 0a37f3825679eb13e4a27b5b7ee176f4 308 Gene3D G3DSA:1.20.225.30 228 298 7.1E-24 T 17-10-2018 FORC55_1678 0a37f3825679eb13e4a27b5b7ee176f4 308 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 17-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_1678 0a37f3825679eb13e4a27b5b7ee176f4 308 Gene3D G3DSA:3.20.20.70 1 227 1.6E-72 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1678 0a37f3825679eb13e4a27b5b7ee176f4 308 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 1 295 49.512 T 17-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR01900 YidC translocation/secretion protein signature 466 481 7.1E-27 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR01900 YidC translocation/secretion protein signature 486 510 7.1E-27 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR01900 YidC translocation/secretion protein signature 337 353 7.1E-27 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 Gene3D G3DSA:2.70.98.90 62 331 2.1E-88 T 17-10-2018 IPR038221 YidC, periplasmic domain superfamily FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 Pfam PF02096 60Kd inner membrane protein 352 531 5.3E-64 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 533 26.077 T 17-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 350 3.5E-112 T 17-10-2018 IPR028053 Membrane insertase YidC, N-terminal FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 351 530 6.0E-74 T 17-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 162 182 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 413 436 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 250 265 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 497 520 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 72 93 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 215 233 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 322 342 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 PRINTS PR00701 60kDa inner membrane protein signature 460 482 2.4E-100 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 FORC55_2684 a340c61ead41e370e49311fdeabe12fb 541 Pfam PF14849 YidC periplasmic domain 66 341 6.7E-83 T 17-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain FORC55_3157 1134304f62720e7748b2fd9be7702295 326 Gene3D G3DSA:3.40.50.2300 62 154 1.3E-19 T 17-10-2018 FORC55_3157 1134304f62720e7748b2fd9be7702295 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 211 3.8E-14 T 17-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain FORC55_3157 1134304f62720e7748b2fd9be7702295 326 SMART SM00354 1 73 4.1E-25 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_3157 1134304f62720e7748b2fd9be7702295 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.1E-16 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_3157 1134304f62720e7748b2fd9be7702295 326 SUPERFAMILY SSF53822 61 312 1.28E-38 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_3157 1134304f62720e7748b2fd9be7702295 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 325 5.2E-138 T 17-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 FORC55_3157 1134304f62720e7748b2fd9be7702295 326 Gene3D G3DSA:3.40.50.2300 155 326 7.9E-26 T 17-10-2018 FORC55_3157 1134304f62720e7748b2fd9be7702295 326 Gene3D G3DSA:1.10.260.40 1 61 5.3E-25 T 17-10-2018 FORC55_3157 1134304f62720e7748b2fd9be7702295 326 SUPERFAMILY SSF47413 1 58 1.33E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_3157 1134304f62720e7748b2fd9be7702295 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 17-10-2018 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 SUPERFAMILY SSF55186 65 242 4.19E-62 T 17-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Gene3D G3DSA:3.40.50.800 533 642 3.0E-32 T 17-10-2018 IPR036621 Anticodon-binding domain superfamily FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Pfam PF03129 Anticodon binding domain 542 631 4.6E-22 T 17-10-2018 IPR004154 Anticodon-binding FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.141 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 SUPERFAMILY SSF81271 3 61 1.01E-14 T 17-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 SMART SM00863 171 220 5.3E-19 T 17-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 7.0E-54 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 7.0E-54 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 7.0E-54 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 7.0E-54 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 7.0E-54 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 8.0E-49 T 17-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 1.4E-239 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 SUPERFAMILY SSF52954 530 637 1.18E-32 T 17-10-2018 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Gene3D G3DSA:3.10.20.30 3 62 1.8E-21 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 9.9E-14 T 17-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Gene3D G3DSA:3.30.930.10 224 532 4.6E-128 T 17-10-2018 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 SUPERFAMILY SSF55681 244 527 2.87E-98 T 17-10-2018 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Pfam PF02824 TGS domain 4 61 5.0E-11 T 17-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Gene3D G3DSA:3.30.980.10 70 223 2.2E-62 T 17-10-2018 FORC55_2989 f3c74ac3c08fe29362d779eb56eb0754 642 Gene3D G3DSA:3.30.54.20 131 188 2.2E-62 T 17-10-2018 FORC55_3464 b4054355e755414b2498bc6b9e16d82c 690 Pfam PF00128 Alpha amylase, catalytic domain 243 611 1.7E-49 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_3464 b4054355e755414b2498bc6b9e16d82c 690 Gene3D G3DSA:3.20.20.80 200 427 2.5E-53 T 17-10-2018 FORC55_3464 b4054355e755414b2498bc6b9e16d82c 690 SMART SM00642 210 652 1.4E-95 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_3464 b4054355e755414b2498bc6b9e16d82c 690 PIRSF PIRSF036917 1 690 0.0 T 17-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 FORC55_3464 b4054355e755414b2498bc6b9e16d82c 690 SUPERFAMILY SSF51445 194 661 1.31E-89 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_3464 b4054355e755414b2498bc6b9e16d82c 690 Gene3D G3DSA:3.20.20.80 437 659 1.2E-37 T 17-10-2018 FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 Pfam PF08212 Lipocalin-like domain 30 170 3.2E-40 T 17-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 PRINTS PR01171 Bacterial lipocalin signature 29 43 5.8E-42 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 PRINTS PR01171 Bacterial lipocalin signature 132 143 5.8E-42 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 PRINTS PR01171 Bacterial lipocalin signature 99 113 5.8E-42 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 PRINTS PR01171 Bacterial lipocalin signature 116 124 5.8E-42 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 PRINTS PR01171 Bacterial lipocalin signature 159 169 5.8E-42 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 PRINTS PR01171 Bacterial lipocalin signature 65 74 5.8E-42 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 PRINTS PR01171 Bacterial lipocalin signature 46 62 5.8E-42 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 17-10-2018 IPR022272 Lipocalin family conserved site FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 SUPERFAMILY SSF50814 5 170 1.18E-51 T 17-10-2018 IPR012674 Calycin FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 Gene3D G3DSA:2.40.128.20 10 171 2.1E-51 T 17-10-2018 IPR012674 Calycin FORC55_3009 8dd180fe650fd83d51710ed9d83e9308 171 PIRSF PIRSF036893 1 171 4.3E-41 T 17-10-2018 IPR022271 Lipocalin, ApoD type FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 340 2.4E-8 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 SUPERFAMILY SSF53244 288 417 3.51E-33 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 SUPERFAMILY SSF53623 15 286 1.44E-86 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 Gene3D G3DSA:3.90.190.20 289 420 3.6E-35 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 Pfam PF08245 Mur ligase middle domain 54 196 6.5E-8 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 4.3E-108 T 17-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 Gene3D G3DSA:3.40.1190.10 1 288 2.9E-94 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 17-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 FORC55_1776 93dbe08e3b4755d02e7803d6ef93adb9 421 PIRSF PIRSF001563 7 420 3.9E-107 T 17-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 FORC55_2841 8dd16b942d35cc2e529ffca582808c82 472 PIRSF PIRSF001386 3 472 2.5E-205 T 17-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 FORC55_2841 8dd16b942d35cc2e529ffca582808c82 472 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 17-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 FORC55_2841 8dd16b942d35cc2e529ffca582808c82 472 Gene3D G3DSA:3.40.640.10 61 334 5.8E-198 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2841 8dd16b942d35cc2e529ffca582808c82 472 Gene3D G3DSA:3.90.1150.10 10 468 5.8E-198 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_2841 8dd16b942d35cc2e529ffca582808c82 472 Pfam PF01212 Beta-eliminating lyase 49 437 6.9E-89 T 17-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 FORC55_2841 8dd16b942d35cc2e529ffca582808c82 472 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 97.097 T 17-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 FORC55_2841 8dd16b942d35cc2e529ffca582808c82 472 SUPERFAMILY SSF53383 6 469 1.92E-125 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2841 8dd16b942d35cc2e529ffca582808c82 472 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 0.0 T 17-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 Gene3D G3DSA:3.40.120.10 12 218 1.6E-74 T 17-10-2018 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 Gene3D G3DSA:3.40.120.10 221 318 3.2E-45 T 17-10-2018 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 181 2.8E-40 T 17-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 17-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 SUPERFAMILY SSF53738 209 317 2.12E-7 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 SUPERFAMILY SSF53738 27 235 1.04E-53 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 Gene3D G3DSA:3.40.120.10 319 442 2.8E-35 T 17-10-2018 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 17-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 4.4E-17 T 17-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 SUPERFAMILY SSF53738 305 447 8.54E-32 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.6E-28 T 17-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 535 2.7E-6 T 17-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 SUPERFAMILY SSF55957 432 544 1.44E-20 T 17-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0752 b84e12e6dfe9fe0e72a54f1bf899a993 548 Gene3D G3DSA:3.30.310.50 443 546 1.1E-35 T 17-10-2018 FORC55_2687 cd15a1091acfc6e5cccb088c0b8fe9f5 245 SUPERFAMILY SSF52540 1 238 2.32E-76 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2687 cd15a1091acfc6e5cccb088c0b8fe9f5 245 Gene3D G3DSA:3.40.50.300 1 243 1.7E-76 T 17-10-2018 FORC55_2687 cd15a1091acfc6e5cccb088c0b8fe9f5 245 SMART SM00382 26 216 2.0E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2687 cd15a1091acfc6e5cccb088c0b8fe9f5 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2687 cd15a1091acfc6e5cccb088c0b8fe9f5 245 PIRSF PIRSF039085 1 244 4.5E-106 T 17-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 FORC55_2687 cd15a1091acfc6e5cccb088c0b8fe9f5 245 Pfam PF00005 ABC transporter 17 168 9.2E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 SUPERFAMILY SSF50341 11 153 3.01E-29 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 SUPERFAMILY SSF52172 171 296 4.84E-23 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 SMART SM00260 11 148 6.8E-18 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 Pfam PF01584 CheW-like domain 14 150 1.1E-30 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 SMART SM00448 174 291 2.2E-14 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 Gene3D G3DSA:2.30.30.40 20 142 2.8E-24 T 17-10-2018 FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 Gene3D G3DSA:3.40.50.2300 164 303 2.1E-24 T 17-10-2018 FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 Pfam PF00072 Response regulator receiver domain 176 290 1.3E-15 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 PIRSF PIRSF002867 1 299 2.5E-89 T 17-10-2018 IPR024181 Chemotaxis response regulator CheV FORC55_3541 322c55688cfe84783d825cb0e4c6b782 306 Gene3D G3DSA:2.40.50.180 32 147 2.8E-24 T 17-10-2018 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 SUPERFAMILY SSF158472 137 186 8.24E-10 T 17-10-2018 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 Gene3D G3DSA:1.20.1480.50 97 189 2.4E-11 T 17-10-2018 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 SUPERFAMILY SSF55874 278 449 1.44E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 2.9E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 2.9E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 2.9E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 2.9E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 288 3.9E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 449 2.1E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 Gene3D G3DSA:1.10.287.130 190 287 2.9E-15 T 17-10-2018 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 SMART SM00388 222 289 1.6E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 SMART SM00304 137 189 4.3E-14 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 SMART SM00387 339 451 5.3E-24 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 Gene3D G3DSA:3.30.565.10 296 457 1.4E-28 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 SUPERFAMILY SSF47384 207 287 2.16E-14 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_2954 5d80975ee8b15dac15f72bff2edc2200 459 Pfam PF00672 HAMP domain 137 185 1.6E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0697 36ff12694824c186526b787c81b330e2 339 Pfam PF06804 NlpB/DapX lipoprotein 35 335 3.5E-103 T 17-10-2018 IPR010653 NlpB/DapX lipoprotein FORC55_0697 36ff12694824c186526b787c81b330e2 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 36.826 T 17-10-2018 IPR014524 Outer membrane protein assembly factor BamC FORC55_0697 36ff12694824c186526b787c81b330e2 339 Gene3D G3DSA:3.30.530.50 96 205 1.4E-12 T 17-10-2018 FORC55_0697 36ff12694824c186526b787c81b330e2 339 Gene3D G3DSA:3.30.310.170 220 339 1.8E-42 T 17-10-2018 FORC55_0697 36ff12694824c186526b787c81b330e2 339 PIRSF PIRSF026343 4 339 1.9E-152 T 17-10-2018 IPR014524 Outer membrane protein assembly factor BamC FORC55_0987 a3fa8ce969e6f8f116edb9920cbf61d4 261 SUPERFAMILY SSF56300 1 221 4.11E-33 T 17-10-2018 FORC55_0987 a3fa8ce969e6f8f116edb9920cbf61d4 261 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 3.8E-12 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_0987 a3fa8ce969e6f8f116edb9920cbf61d4 261 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 1.8E-118 T 17-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 FORC55_0987 a3fa8ce969e6f8f116edb9920cbf61d4 261 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 120.54 T 17-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 FORC55_0987 a3fa8ce969e6f8f116edb9920cbf61d4 261 Gene3D G3DSA:3.60.21.10 1 230 2.3E-19 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_3685 e29863db87d125063cf1587c08a530ad 677 SUPERFAMILY SSF55729 373 540 4.36E-15 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3685 e29863db87d125063cf1587c08a530ad 677 Gene3D G3DSA:3.40.50.11040 3 159 8.4E-18 T 17-10-2018 FORC55_3685 e29863db87d125063cf1587c08a530ad 677 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 669 46.527 T 17-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 FORC55_3685 e29863db87d125063cf1587c08a530ad 677 Pfam PF13718 GNAT acetyltransferase 2 379 491 1.7E-18 T 17-10-2018 IPR000182 GNAT domain FORC55_3685 e29863db87d125063cf1587c08a530ad 677 Pfam PF13718 GNAT acetyltransferase 2 493 540 3.3E-7 T 17-10-2018 IPR000182 GNAT domain FORC55_3685 e29863db87d125063cf1587c08a530ad 677 Gene3D G3DSA:3.40.630.30 338 540 5.4E-67 T 17-10-2018 FORC55_3685 e29863db87d125063cf1587c08a530ad 677 Pfam PF08351 Domain of unknown function (DUF1726) 65 112 1.1E-4 T 17-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 FORC55_3685 e29863db87d125063cf1587c08a530ad 677 Pfam PF05127 Helicase 178 344 3.1E-57 T 17-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 FORC55_3685 e29863db87d125063cf1587c08a530ad 677 SUPERFAMILY SSF52540 156 282 2.06E-11 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3685 e29863db87d125063cf1587c08a530ad 677 Gene3D G3DSA:3.40.50.12320 176 334 2.4E-48 T 17-10-2018 FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 Gene3D G3DSA:3.40.50.970 1 325 8.7E-133 T 17-10-2018 FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 Gene3D G3DSA:3.40.50.920 538 664 3.1E-44 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 17-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 Gene3D G3DSA:3.40.50.970 326 537 4.3E-83 T 17-10-2018 FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 SMART SM00861 354 525 6.9E-66 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 SUPERFAMILY SSF52518 4 328 1.13E-120 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 SUPERFAMILY SSF52922 533 664 7.59E-44 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 9.6E-19 T 17-10-2018 IPR033248 Transketolase, C-terminal domain FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 4.0E-47 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 SUPERFAMILY SSF52518 332 526 5.89E-67 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 6.6E-169 T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_3268 033bec85224255410f2298ad8b6d56e5 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 663 0.0 T 17-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 FORC55_1233 0d641b1d584c7def830e50f4e862d729 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 241 2.3E-18 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1233 0d641b1d584c7def830e50f4e862d729 257 Gene3D G3DSA:3.40.190.10 116 212 2.1E-22 T 17-10-2018 FORC55_1233 0d641b1d584c7def830e50f4e862d729 257 SUPERFAMILY SSF53850 30 257 5.32E-32 T 17-10-2018 FORC55_1233 0d641b1d584c7def830e50f4e862d729 257 Gene3D G3DSA:3.40.190.10 36 241 2.1E-22 T 17-10-2018 FORC55_3021 5c0730e6c47fd46c76d26d2337623d3e 141 Gene3D G3DSA:3.40.630.30 1 139 2.1E-31 T 17-10-2018 FORC55_3021 5c0730e6c47fd46c76d26d2337623d3e 141 SUPERFAMILY SSF55729 1 137 5.48E-28 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3021 5c0730e6c47fd46c76d26d2337623d3e 141 Pfam PF13673 Acetyltransferase (GNAT) domain 39 138 9.2E-15 T 17-10-2018 IPR000182 GNAT domain FORC55_0293 a06f7175b099c7582a5efb6f7eed1b69 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 17-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0293 a06f7175b099c7582a5efb6f7eed1b69 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.2E-49 T 17-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0293 a06f7175b099c7582a5efb6f7eed1b69 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.588 T 17-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0293 a06f7175b099c7582a5efb6f7eed1b69 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 5.4E-40 T 17-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 FORC55_0293 a06f7175b099c7582a5efb6f7eed1b69 110 Gene3D G3DSA:3.90.470.10 1 110 2.5E-48 T 17-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_0293 a06f7175b099c7582a5efb6f7eed1b69 110 SUPERFAMILY SSF54843 1 109 6.15E-45 T 17-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_1635 27dacc19a03520eb3352b857d5b02b54 415 SUPERFAMILY SSF56796 1 380 1.19E-89 T 17-10-2018 FORC55_1635 27dacc19a03520eb3352b857d5b02b54 415 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 2.1E-89 T 17-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 FORC55_1635 27dacc19a03520eb3352b857d5b02b54 415 Gene3D G3DSA:1.20.1090.10 185 382 3.7E-40 T 17-10-2018 FORC55_1635 27dacc19a03520eb3352b857d5b02b54 415 Gene3D G3DSA:3.40.50.1970 1 180 1.9E-48 T 17-10-2018 FORC55_0085 ef26b1ab4c0cd396c0582e2d01b10f42 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.058 T 17-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 FORC55_0085 ef26b1ab4c0cd396c0582e2d01b10f42 106 Gene3D G3DSA:3.40.250.10 1 101 1.4E-25 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_0085 ef26b1ab4c0cd396c0582e2d01b10f42 106 Pfam PF00581 Rhodanese-like domain 11 98 6.2E-14 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_0085 ef26b1ab4c0cd396c0582e2d01b10f42 106 SUPERFAMILY SSF52821 1 104 1.19E-28 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_0085 ef26b1ab4c0cd396c0582e2d01b10f42 106 SMART SM00450 7 102 6.1E-18 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3189 ea26e0f42f2dfdf5d37038ff4f0c7a54 410 SUPERFAMILY SSF103473 9 398 8.37E-57 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_3189 ea26e0f42f2dfdf5d37038ff4f0c7a54 410 Gene3D G3DSA:1.20.1250.20 3 401 2.4E-57 T 17-10-2018 FORC55_3189 ea26e0f42f2dfdf5d37038ff4f0c7a54 410 Pfam PF07690 Major Facilitator Superfamily 15 295 1.0E-30 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_1679 4c97c0f0155227a5a1e2c1afa279abf3 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 486 1.9E-36 T 17-10-2018 IPR000160 GGDEF domain FORC55_1679 4c97c0f0155227a5a1e2c1afa279abf3 489 SUPERFAMILY SSF55073 340 488 1.02E-35 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1679 4c97c0f0155227a5a1e2c1afa279abf3 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 487 9.6E-40 T 17-10-2018 IPR000160 GGDEF domain FORC55_1679 4c97c0f0155227a5a1e2c1afa279abf3 489 Gene3D G3DSA:3.30.70.270 324 489 2.5E-43 T 17-10-2018 FORC55_1679 4c97c0f0155227a5a1e2c1afa279abf3 489 SMART SM00267 324 489 9.9E-40 T 17-10-2018 IPR000160 GGDEF domain FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 Gene3D G3DSA:3.30.1370.100 514 606 1.9E-54 T 17-10-2018 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 SUPERFAMILY SSF118116 470 649 8.76E-39 T 17-10-2018 IPR037198 MutL, C-terminal domain superfamily FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 SMART SM00853 473 612 3.1E-18 T 17-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 SMART SM01340 212 330 3.3E-57 T 17-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.6E-103 T 17-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 1.5E-12 T 17-10-2018 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.7E-39 T 17-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 17-10-2018 IPR014762 DNA mismatch repair, conserved site FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 Gene3D G3DSA:2.30.42.20 470 650 1.9E-54 T 17-10-2018 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 SUPERFAMILY SSF54211 191 329 3.64E-37 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 SUPERFAMILY SSF55874 1 208 2.49E-55 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 Gene3D G3DSA:3.30.565.10 1 216 1.7E-72 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 651 25.907 T 17-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 Pfam PF08676 MutL C terminal dimerisation domain 470 610 6.4E-31 T 17-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 FORC55_2439 3ed871f67828da17165d79ac5ecf1fe7 653 Gene3D G3DSA:3.30.230.10 217 329 4.2E-40 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 PIRSF PIRSF000166 2 305 4.1E-127 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 Pfam PF01218 Coproporphyrinogen III oxidase 10 305 5.6E-131 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 4 282 56.753 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 171 195 - T 17-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 SUPERFAMILY SSF102886 7 305 2.62E-136 T 17-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 Gene3D G3DSA:3.40.1500.10 1 305 3.5E-137 T 17-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 PRINTS PR00073 Coprogen oxidase signature 32 48 1.9E-70 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 PRINTS PR00073 Coprogen oxidase signature 239 266 1.9E-70 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 PRINTS PR00073 Coprogen oxidase signature 130 152 1.9E-70 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 PRINTS PR00073 Coprogen oxidase signature 167 196 1.9E-70 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 PRINTS PR00073 Coprogen oxidase signature 95 119 1.9E-70 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0041 3a32051bd2d070f572049c4b09019d4e 305 PRINTS PR00073 Coprogen oxidase signature 267 293 1.9E-70 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 Gene3D G3DSA:3.30.70.120 1 112 7.3E-49 T 17-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal FORC55_0621 ac02f148f6674d262df96da462f531fa 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 17-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 PIRSF PIRSF039144 1 112 1.5E-58 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 17-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 SMART SM00938 4 105 6.4E-70 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 52 75 2.1E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 23 41 2.1E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 2 17 2.1E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 83 103 2.1E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_0621 ac02f148f6674d262df96da462f531fa 112 SUPERFAMILY SSF54913 1 112 2.73E-47 T 17-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 SUPERFAMILY SSF51569 6 303 9.16E-94 T 17-10-2018 FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 SUPERFAMILY SSF89000 300 461 7.06E-45 T 17-10-2018 FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 SUPERFAMILY SSF51230 525 598 2.49E-21 T 17-10-2018 IPR011053 Single hybrid motif FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 Gene3D G3DSA:2.40.50.100 533 599 3.4E-25 T 17-10-2018 FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 Pfam PF00364 Biotin-requiring enzyme 539 598 1.2E-18 T 17-10-2018 IPR000089 Biotin/lipoyl attachment FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 Pfam PF02436 Conserved carboxylase domain 295 501 8.0E-52 T 17-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 595 2.0E-279 T 17-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 Gene3D G3DSA:3.20.20.70 1 467 8.5E-173 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 555 572 - T 17-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 FORC55_1954 d1df8303d27ea185d0e96f6861329206 599 Pfam PF00682 HMGL-like 8 273 3.5E-65 T 17-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 17-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 Gene3D G3DSA:3.20.20.80 1 478 4.0E-169 T 17-10-2018 FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 7.4E-137 T 17-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.3E-15 T 17-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.3E-15 T 17-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.3E-15 T 17-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.3E-15 T 17-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.3E-15 T 17-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 SUPERFAMILY SSF51445 3 471 4.6E-164 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_1269 4ca2b07dcd0e51903a778e3381176be6 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 17-10-2018 IPR018120 Glycoside hydrolase family 1, active site FORC55_2040 542f5e300dc647217489fbfd7ec6e065 123 SUPERFAMILY SSF141371 1 118 4.71E-33 T 17-10-2018 FORC55_2040 542f5e300dc647217489fbfd7ec6e065 123 Pfam PF07238 PilZ domain 3 100 1.6E-13 T 17-10-2018 IPR009875 PilZ domain GO:0035438 FORC55_2040 542f5e300dc647217489fbfd7ec6e065 123 Gene3D G3DSA:2.40.10.220 1 119 9.9E-31 T 17-10-2018 FORC55_2040 542f5e300dc647217489fbfd7ec6e065 123 PIRSF PIRSF028141 1 120 1.9E-38 T 17-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type FORC55_0100 37f3ade4b2b81745253595f053a27bdf 817 Pfam PF01295 Adenylate cyclase, class-I 200 803 8.3E-256 T 17-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 FORC55_0100 37f3ade4b2b81745253595f053a27bdf 817 PIRSF PIRSF001444 1 817 0.0 T 17-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 FORC55_0100 37f3ade4b2b81745253595f053a27bdf 817 Pfam PF12633 Adenylate cyclase NT domain 2 172 2.3E-68 T 17-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 356 1.2E-128 T 17-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 102 7.4E-19 T 17-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 SUPERFAMILY SSF53597 147 358 3.67E-55 T 17-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 149 359 8.7E-58 T 17-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 PIRSF PIRSF006769 1 364 2.2E-122 T 17-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 91 - T 17-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 Gene3D G3DSA:3.40.430.10 139 364 2.7E-67 T 17-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 SUPERFAMILY SSF53927 6 148 3.01E-47 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 Gene3D G3DSA:3.40.140.10 1 138 6.3E-45 T 17-10-2018 FORC55_0591 4881757c6d561df73ec6cb7083f88db2 365 Pfam PF01872 RibD C-terminal domain 150 354 2.0E-48 T 17-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 SUPERFAMILY SSF55347 601 784 3.14E-47 T 17-10-2018 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.6E-67 T 17-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 Gene3D G3DSA:3.30.70.260 381 444 2.4E-5 T 17-10-2018 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 Pfam PF00742 Homoserine dehydrogenase 601 796 4.2E-44 T 17-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 SUPERFAMILY SSF53633 5 291 2.62E-60 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 17-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 SUPERFAMILY SSF51735 448 623 1.95E-36 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 Gene3D G3DSA:3.40.50.720 451 797 4.0E-105 T 17-10-2018 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 Gene3D G3DSA:3.40.1160.10 8 290 3.2E-76 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 Gene3D G3DSA:3.30.360.10 612 782 4.0E-105 T 17-10-2018 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 PIRSF PIRSF000727 5 803 4.4E-289 T 17-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 Gene3D G3DSA:1.20.120.1320 44 137 3.2E-76 T 17-10-2018 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 2.7E-16 T 17-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 17-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0206 138b3d639a8c9f938bc8cf4dd058eaae 803 Pfam PF00696 Amino acid kinase family 5 277 3.1E-43 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_2495 f3e24baa0ddc1c8d788207bf7f909d4c 201 SUPERFAMILY SSF51569 2 199 1.39E-66 T 17-10-2018 FORC55_2495 f3e24baa0ddc1c8d788207bf7f909d4c 201 Pfam PF01081 KDPG and KHG aldolase 3 195 1.4E-74 T 17-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 FORC55_2495 f3e24baa0ddc1c8d788207bf7f909d4c 201 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 3 200 2.5E-86 T 17-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 FORC55_2495 f3e24baa0ddc1c8d788207bf7f909d4c 201 Gene3D G3DSA:3.20.20.70 1 201 3.1E-75 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2495 f3e24baa0ddc1c8d788207bf7f909d4c 201 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 17-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 FORC55_2495 f3e24baa0ddc1c8d788207bf7f909d4c 201 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 17-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 FORC55_0128 5d2efa8812510b30b0f6941eb9be8de1 369 SUPERFAMILY SSF53335 11 367 4.78E-54 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0128 5d2efa8812510b30b0f6941eb9be8de1 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.114 T 17-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 FORC55_0128 5d2efa8812510b30b0f6941eb9be8de1 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 17-10-2018 IPR030390 RNA methyltransferase TrmA, active site FORC55_0128 5d2efa8812510b30b0f6941eb9be8de1 369 Gene3D G3DSA:3.40.1350.30 45 189 4.0E-139 T 17-10-2018 FORC55_0128 5d2efa8812510b30b0f6941eb9be8de1 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 1.9E-184 T 17-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 FORC55_0128 5d2efa8812510b30b0f6941eb9be8de1 369 Gene3D G3DSA:3.40.50.150 13 363 4.0E-139 T 17-10-2018 FORC55_0128 5d2efa8812510b30b0f6941eb9be8de1 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 1.3E-187 T 17-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 FORC55_0128 5d2efa8812510b30b0f6941eb9be8de1 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 17-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site FORC55_3567 77fdcf617b0f502d94d1971330af8ad7 378 Gene3D G3DSA:3.20.20.70 2 378 5.8E-126 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_3567 77fdcf617b0f502d94d1971330af8ad7 378 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.3E-126 T 17-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 FORC55_3567 77fdcf617b0f502d94d1971330af8ad7 378 PIRSF PIRSF000138 2 378 1.3E-121 T 17-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 FORC55_3567 77fdcf617b0f502d94d1971330af8ad7 378 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 378 72.13 T 17-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 FORC55_3567 77fdcf617b0f502d94d1971330af8ad7 378 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 17-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 FORC55_3567 77fdcf617b0f502d94d1971330af8ad7 378 SUPERFAMILY SSF51395 7 375 7.33E-99 T 17-10-2018 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 17-10-2018 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.7E-6 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.7E-6 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 SUPERFAMILY SSF47413 1 59 1.04E-17 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.6E-43 T 17-10-2018 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 Gene3D G3DSA:3.40.50.2300 161 290 1.3E-87 T 17-10-2018 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 SUPERFAMILY SSF53822 60 331 3.93E-94 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 Gene3D G3DSA:3.40.50.2300 69 322 1.3E-87 T 17-10-2018 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.6E-20 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 Gene3D G3DSA:1.10.260.40 3 59 2.0E-23 T 17-10-2018 FORC55_2811 8a9cc07291d126941a8ddeee58bc1fc8 334 SMART SM00354 1 71 7.1E-36 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1192 3c2d2be4d14272f5204fa0c59f498ae2 518 SMART SM00304 189 241 6.4E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1192 3c2d2be4d14272f5204fa0c59f498ae2 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 301 484 1.1E-43 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1192 3c2d2be4d14272f5204fa0c59f498ae2 518 Gene3D G3DSA:1.10.287.950 189 518 2.8E-73 T 17-10-2018 FORC55_1192 3c2d2be4d14272f5204fa0c59f498ae2 518 SUPERFAMILY SSF58104 209 517 4.84E-75 T 17-10-2018 FORC55_1192 3c2d2be4d14272f5204fa0c59f498ae2 518 SMART SM00283 256 517 1.5E-70 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2394 4d9699394bd7a30bf1ebdc92762aee58 291 Pfam PF00483 Nucleotidyl transferase 10 267 2.2E-31 T 17-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 FORC55_2394 4d9699394bd7a30bf1ebdc92762aee58 291 Gene3D G3DSA:3.90.550.10 2 279 1.3E-81 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2394 4d9699394bd7a30bf1ebdc92762aee58 291 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 264 6.4E-126 T 17-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 FORC55_2394 4d9699394bd7a30bf1ebdc92762aee58 291 SUPERFAMILY SSF53448 1 274 6.68E-65 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.523 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 Gene3D G3DSA:3.40.50.10860 8 276 4.8E-107 T 17-10-2018 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 SUPERFAMILY SSF53223 1 122 6.04E-39 T 17-10-2018 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 4.3E-38 T 17-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 17-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 Gene3D G3DSA:3.40.50.720 6 259 4.8E-107 T 17-10-2018 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.4E-87 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.4E-87 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.4E-87 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.4E-87 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.4E-87 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.4E-87 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.4E-87 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 9.6E-68 T 17-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 FORC55_0888 8c29e9c94da44e18bee88e3681b3957e 286 SUPERFAMILY SSF51735 123 280 1.27E-50 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1518 36c63870540960ec822ec645e5193aa5 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.0E-27 T 17-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 5.8E-36 T 17-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Gene3D G3DSA:3.30.470.90 69 317 1.2E-101 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Gene3D G3DSA:1.10.287.610 1 68 3.5E-27 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Gene3D G3DSA:3.40.50.10190 583 669 6.2E-24 T 17-10-2018 IPR036420 BRCT domain superfamily FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 PIRSF PIRSF001604 1 669 1.1E-249 T 17-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Gene3D G3DSA:1.10.150.20 506 582 5.7E-28 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SUPERFAMILY SSF47781 403 583 3.48E-60 T 17-10-2018 IPR010994 RuvA domain 2-like FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SMART SM00532 3 448 4.9E-277 T 17-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Pfam PF14520 Helix-hairpin-helix domain 446 501 4.8E-6 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 17-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SUPERFAMILY SSF50249 318 399 2.91E-29 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Gene3D G3DSA:2.20.70.80 391 431 7.9E-21 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 2.5E-132 T 17-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SMART SM00278 512 531 350.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SMART SM00278 446 465 19.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SMART SM00278 480 499 16.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SMART SM00278 544 563 1800.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SMART SM00292 594 669 3.8E-8 T 17-10-2018 IPR001357 BRCT domain FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Gene3D G3DSA:1.10.150.20 432 505 3.9E-30 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SUPERFAMILY SSF56091 2 316 6.72E-123 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.2E-9 T 17-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 663 2.7E-262 T 17-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Hamap MF_01588 DNA ligase [ligA]. 2 668 53.366 T 17-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 SUPERFAMILY SSF52113 595 668 4.8E-16 T 17-10-2018 IPR036420 BRCT domain superfamily FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Gene3D G3DSA:2.40.50.140 318 390 2.1E-34 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Pfam PF12826 Helix-hairpin-helix motif 510 573 9.3E-21 T 17-10-2018 FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 17-10-2018 IPR018239 NAD-dependent DNA ligase, active site FORC55_1804 ddbc18ebd4b7bbe317a9e9ad2f9be930 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 597 666 3.3E-10 T 17-10-2018 IPR001357 BRCT domain FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.3E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.3E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.3E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.3E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.3E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.3E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.3E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 SUPERFAMILY SSF52935 329 480 7.2E-38 T 17-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 5.7E-169 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 349 6.5E-131 T 17-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 1.2E-29 T 17-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 Gene3D G3DSA:3.20.20.60 6 341 1.3E-156 T 17-10-2018 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 Gene3D G3DSA:2.40.33.10 74 172 1.3E-156 T 17-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 17-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 SUPERFAMILY SSF50800 74 169 5.06E-24 T 17-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 Gene3D G3DSA:3.40.1380.20 342 476 1.3E-156 T 17-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0834 fbb427ba250ee5a00b07e3c0b9775494 481 SUPERFAMILY SSF51621 4 346 1.06E-88 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 SUPERFAMILY SSF57825 101 152 1.7E-15 T 17-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.241 T 17-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 5.8E-19 T 17-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.6E-61 T 17-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 8.0E-46 T 17-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 Gene3D G3DSA:2.30.30.20 101 153 3.3E-25 T 17-10-2018 FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 Gene3D G3DSA:3.30.70.140 1 100 3.5E-36 T 17-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 SUPERFAMILY SSF54893 2 100 5.49E-35 T 17-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily FORC55_0368 d7f8911236e22e7cd7824cf1137d1220 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 4.8E-30 T 17-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal FORC55_0307 5131d7d1e96035ad63acca849eb526a3 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 17-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0307 5131d7d1e96035ad63acca849eb526a3 144 SUPERFAMILY SSF52080 4 143 4.32E-46 T 17-10-2018 IPR036227 Ribosomal L18e/L15P superfamily FORC55_0307 5131d7d1e96035ad63acca849eb526a3 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 2.6E-49 T 17-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0307 5131d7d1e96035ad63acca849eb526a3 144 Gene3D G3DSA:3.100.10.10 69 144 3.3E-13 T 17-10-2018 FORC55_0307 5131d7d1e96035ad63acca849eb526a3 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.992 T 17-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 FORC55_0307 5131d7d1e96035ad63acca849eb526a3 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 4.0E-31 T 17-10-2018 IPR021131 Ribosomal protein L18e/L15P FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 PIRSF PIRSF000521 121 154 2.9 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 PIRSF PIRSF000521 2 128 0.0046 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 PIRSF PIRSF000521 175 412 3.7E-28 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 Pfam PF00202 Aminotransferase class-III 16 407 5.5E-75 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 Gene3D G3DSA:3.40.640.10 54 313 3.6E-104 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 Gene3D G3DSA:3.90.1150.10 7 405 3.6E-104 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 410 1.7E-141 T 17-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 409 7.5E-197 T 17-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 FORC55_3442 c626f0462bac27a4c7b8a78e7b64c9c7 421 SUPERFAMILY SSF53383 3 408 2.77E-104 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 1.0E-61 T 17-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 Gene3D G3DSA:3.40.50.620 323 475 4.9E-38 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 1.7E-125 T 17-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.723 T 17-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 Gene3D G3DSA:3.40.1190.20 5 310 6.9E-110 T 17-10-2018 IPR029056 Ribokinase-like FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 SUPERFAMILY SSF52374 340 471 8.73E-24 T 17-10-2018 FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 3.0E-46 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 Pfam PF01467 Cytidylyltransferase-like 345 470 5.7E-15 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.2E-18 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 FORC55_0438 05900e13cf9cf04f03d11d78504c03b6 476 SUPERFAMILY SSF53613 12 305 5.46E-57 T 17-10-2018 IPR029056 Ribokinase-like FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 202 222 2.7E-5 T 17-10-2018 FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 164 181 2.7E-5 T 17-10-2018 FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 182 201 2.7E-5 T 17-10-2018 FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 Gene3D G3DSA:3.30.1330.60 81 223 6.8E-42 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 Pfam PF13488 Glycine zipper 39 87 3.2E-12 T 17-10-2018 IPR039567 Glycine zipper domain FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 Pfam PF00691 OmpA family 119 213 1.1E-20 T 17-10-2018 IPR006665 OmpA-like domain FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 SUPERFAMILY SSF103088 107 222 1.96E-36 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 PRINTS PR01021 OMPA domain signature 164 180 3.1E-8 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_1591 ec2b1eef5017a7b4e03a93549d0499b1 223 PRINTS PR01021 OMPA domain signature 149 164 3.1E-8 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_0257 3ce3b2dec971379a97213b634f3199a4 491 Pfam PF13401 AAA domain 29 152 1.3E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0257 3ce3b2dec971379a97213b634f3199a4 491 SUPERFAMILY SSF52540 13 220 4.64E-10 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0257 3ce3b2dec971379a97213b634f3199a4 491 Gene3D G3DSA:3.30.70.1070 384 488 3.8E-26 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_0257 3ce3b2dec971379a97213b634f3199a4 491 Gene3D G3DSA:3.40.50.300 9 163 5.6E-9 T 17-10-2018 FORC55_0257 3ce3b2dec971379a97213b634f3199a4 491 Pfam PF05036 Sporulation related domain 404 477 2.5E-8 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 2.5E-18 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 SUPERFAMILY SSF63380 275 380 4.64E-27 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 SUPERFAMILY SSF141673 6 133 7.19E-30 T 17-10-2018 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Pfam PF03473 MOSC domain 139 262 1.8E-30 T 17-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 117 1.4E-30 T 17-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 SUPERFAMILY SSF52343 368 508 1.23E-36 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Gene3D G3DSA:2.40.33.20 134 279 1.0E-5 T 17-10-2018 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 SUPERFAMILY SSF54292 502 605 5.51E-27 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 SUPERFAMILY SSF50800 5 264 2.88E-17 T 17-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 2.8E-8 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 2.8E-8 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 2.8E-8 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 2.8E-8 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 2.8E-8 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Gene3D G3DSA:3.40.50.80 382 507 2.0E-33 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Gene3D G3DSA:2.40.30.10 280 378 7.9E-23 T 17-10-2018 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Gene3D G3DSA:3.10.20.30 508 605 2.2E-22 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 528 597 2.6E-14 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 FORC55_3512 6b0310493b1dd0af3aa739155ac75cf0 605 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 2.4E-15 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 FORC55_1647 6bafcde18a02d1737c61b245d4cfe231 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.159 T 17-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 FORC55_1647 6bafcde18a02d1737c61b245d4cfe231 245 Pfam PF00977 Histidine biosynthesis protein 1 234 1.0E-74 T 17-10-2018 IPR006062 Histidine biosynthesis GO:0000105 FORC55_1647 6bafcde18a02d1737c61b245d4cfe231 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 6.7E-76 T 17-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 FORC55_1647 6bafcde18a02d1737c61b245d4cfe231 245 SUPERFAMILY SSF51366 1 242 3.63E-62 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_1647 6bafcde18a02d1737c61b245d4cfe231 245 Gene3D G3DSA:3.20.20.70 1 245 6.2E-89 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1225 c76f2ac7cc6743ce915cef1c59ab7927 124 SUPERFAMILY SSF52540 2 122 5.43E-14 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1225 c76f2ac7cc6743ce915cef1c59ab7927 124 Gene3D G3DSA:3.40.50.300 3 124 6.9E-27 T 17-10-2018 FORC55_1225 c76f2ac7cc6743ce915cef1c59ab7927 124 Pfam PF13671 AAA domain 5 101 3.0E-14 T 17-10-2018 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 SUPERFAMILY SSF54826 3 138 3.36E-56 T 17-10-2018 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 PIRSF PIRSF001400 1 431 6.8E-193 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 Pfam PF03952 Enolase, N-terminal domain 4 134 7.9E-58 T 17-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 SUPERFAMILY SSF51604 144 428 4.53E-128 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 17-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 Hamap MF_00318 Enolase [eno]. 2 417 44.6 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 Gene3D G3DSA:3.30.390.10 3 127 2.1E-54 T 17-10-2018 IPR029017 Enolase-like, N-terminal FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 145 430 5.6E-139 T 17-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.0E-207 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 Gene3D G3DSA:3.20.20.120 128 433 8.3E-134 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 SMART SM01192 143 431 5.8E-213 T 17-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0428 caeb8e9d4285cb03358569066bc035b4 433 SMART SM01193 4 134 2.5E-92 T 17-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Gene3D G3DSA:3.40.1160.10 3 295 1.8E-86 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 PIRSF PIRSF000727 1 817 0.0 T 17-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 17-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 17-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 SUPERFAMILY SSF53633 1 298 2.09E-76 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 SUPERFAMILY SSF55347 614 797 2.03E-50 T 17-10-2018 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 2.0E-26 T 17-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Gene3D G3DSA:3.30.2130.10 302 464 1.8E-43 T 17-10-2018 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Pfam PF01842 ACT domain 324 378 5.3E-8 T 17-10-2018 IPR002912 ACT domain FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Pfam PF13840 ACT domain 393 456 7.9E-7 T 17-10-2018 IPR027795 CASTOR, ACT domain FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 SUPERFAMILY SSF55021 303 381 1.32E-20 T 17-10-2018 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Gene3D G3DSA:3.40.50.720 467 811 5.6E-122 T 17-10-2018 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Pfam PF00742 Homoserine dehydrogenase 614 810 6.2E-50 T 17-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Gene3D G3DSA:3.30.360.10 625 795 5.6E-122 T 17-10-2018 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 SUPERFAMILY SSF51735 463 636 8.86E-38 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 4.4E-130 T 17-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 SUPERFAMILY SSF55021 383 476 2.24E-21 T 17-10-2018 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Pfam PF00696 Amino acid kinase family 2 284 1.1E-50 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_0508 4cce2b1fd1b2d9d8dea14f809e09d4b0 819 Gene3D G3DSA:1.20.120.1320 41 142 1.8E-86 T 17-10-2018 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 Gene3D G3DSA:3.30.420.40 207 257 3.6E-34 T 17-10-2018 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 Gene3D G3DSA:3.30.420.40 12 206 3.6E-34 T 17-10-2018 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 SUPERFAMILY SSF53067 217 473 1.49E-26 T 17-10-2018 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 SUPERFAMILY SSF53067 9 204 1.02E-26 T 17-10-2018 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 PRINTS PR00301 70kDa heat shock protein signature 414 434 7.8E-9 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 PRINTS PR00301 70kDa heat shock protein signature 161 181 7.8E-9 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 PRINTS PR00301 70kDa heat shock protein signature 10 23 7.8E-9 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 PRINTS PR00301 70kDa heat shock protein signature 228 238 7.8E-9 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 14 21 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 222 235 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 Pfam PF00012 Hsp70 protein 12 336 1.2E-17 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1420 bc78816cb494971d1dad043dec525dc5 633 Gene3D G3DSA:3.90.640.10 258 337 3.6E-34 T 17-10-2018 FORC55_3281 fced9b45e349876c15fb379c06dc64dd 96 SUPERFAMILY SSF54909 2 88 2.06E-24 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel FORC55_3281 fced9b45e349876c15fb379c06dc64dd 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.6E-20 T 17-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain FORC55_3281 fced9b45e349876c15fb379c06dc64dd 96 Gene3D G3DSA:3.30.70.100 1 93 3.9E-26 T 17-10-2018 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 Gene3D G3DSA:3.40.1380.10 61 207 1.6E-109 T 17-10-2018 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 2.0E-110 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 17-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 SUPERFAMILY SSF52943 2 288 4.91E-95 T 17-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 Gene3D G3DSA:1.10.287.80 6 284 1.6E-109 T 17-10-2018 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 Pfam PF00231 ATP synthase 5 287 6.3E-96 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.5 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.3E-36 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.3E-36 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.3E-36 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2647 59fd3f6ada26da864967f02bff1f01b6 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.3E-36 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2617 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:3.40.50.300 11 273 4.2E-100 T 17-10-2018 FORC55_2617 e5306c34bea1f62fddd0e1cfc665905e 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 721 0.0 T 17-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 FORC55_2617 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:3.40.50.300 281 636 1.6E-132 T 17-10-2018 FORC55_2617 e5306c34bea1f62fddd0e1cfc665905e 723 SUPERFAMILY SSF52540 8 642 3.25E-181 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2617 e5306c34bea1f62fddd0e1cfc665905e 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 271 6.6E-77 T 17-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 FORC55_2617 e5306c34bea1f62fddd0e1cfc665905e 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 4.1E-79 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 FORC55_2617 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:1.10.486.10 382 538 1.6E-132 T 17-10-2018 FORC55_2617 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:1.10.10.160 115 187 4.2E-100 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 1.2E-10 T 17-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 Gene3D G3DSA:1.10.155.10 1 74 4.5E-11 T 17-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 9.7E-68 T 17-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 SMART SM00138 8 272 1.2E-132 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 6.8E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 6.8E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 6.8E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 6.8E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 6.8E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 6.8E-43 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 Gene3D G3DSA:3.40.50.150 75 274 1.4E-59 T 17-10-2018 FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 SUPERFAMILY SSF53335 76 269 2.09E-49 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0655 e3b3b6d9b08738fe9335e8cf59733d53 275 SUPERFAMILY SSF47757 3 75 2.22E-15 T 17-10-2018 FORC55_1411 9e084dc2681cf735c6bb1b61f95a6d8c 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 58.594 T 17-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 FORC55_1411 9e084dc2681cf735c6bb1b61f95a6d8c 338 SUPERFAMILY SSF82649 248 337 9.94E-25 T 17-10-2018 FORC55_1411 9e084dc2681cf735c6bb1b61f95a6d8c 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 55 157 9.6E-8 T 17-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 FORC55_1411 9e084dc2681cf735c6bb1b61f95a6d8c 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 3 327 2.2E-108 T 17-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 FORC55_1411 9e084dc2681cf735c6bb1b61f95a6d8c 338 SUPERFAMILY SSF55681 3 247 3.48E-71 T 17-10-2018 FORC55_1411 9e084dc2681cf735c6bb1b61f95a6d8c 338 Gene3D G3DSA:3.30.930.10 3 249 3.6E-81 T 17-10-2018 FORC55_1411 9e084dc2681cf735c6bb1b61f95a6d8c 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 249 333 1.9E-18 T 17-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 FORC55_1411 9e084dc2681cf735c6bb1b61f95a6d8c 338 Gene3D G3DSA:3.30.390.50 250 338 8.8E-28 T 17-10-2018 FORC55_3285 6a2661cd01148e4e068ef276903b5338 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 261 3.7E-22 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_3285 6a2661cd01148e4e068ef276903b5338 334 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 27 328 3.6E-63 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_3285 6a2661cd01148e4e068ef276903b5338 334 Gene3D G3DSA:2.40.50.100 49 189 2.9E-63 T 17-10-2018 FORC55_3285 6a2661cd01148e4e068ef276903b5338 334 SUPERFAMILY SSF111369 37 268 4.05E-28 T 17-10-2018 FORC55_3285 6a2661cd01148e4e068ef276903b5338 334 Gene3D G3DSA:1.10.287.470 87 154 2.9E-63 T 17-10-2018 FORC55_3285 6a2661cd01148e4e068ef276903b5338 334 Gene3D G3DSA:2.40.420.20 28 324 2.9E-63 T 17-10-2018 FORC55_3285 6a2661cd01148e4e068ef276903b5338 334 Gene3D G3DSA:2.40.30.170 37 267 2.9E-63 T 17-10-2018 FORC55_3151 11207e496ca24795b4ed44b98edcea5e 155 PIRSF PIRSF000368 1 155 5.5E-60 T 17-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 FORC55_3151 11207e496ca24795b4ed44b98edcea5e 155 Gene3D G3DSA:3.20.20.70 2 154 1.1E-24 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_3151 11207e496ca24795b4ed44b98edcea5e 155 SUPERFAMILY SSF102114 23 120 1.44E-7 T 17-10-2018 FORC55_3151 11207e496ca24795b4ed44b98edcea5e 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 17-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 FORC55_3151 11207e496ca24795b4ed44b98edcea5e 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 1.2E-61 T 17-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 FORC55_3151 11207e496ca24795b4ed44b98edcea5e 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 6.3E-53 T 17-10-2018 FORC55_2688 8cbbbbf4a9db6a310f044040c7a3a96e 223 Gene3D G3DSA:1.10.3720.10 1 222 6.8E-55 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2688 8cbbbbf4a9db6a310f044040c7a3a96e 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 2.5E-24 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_2688 8cbbbbf4a9db6a310f044040c7a3a96e 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 218 2.8E-20 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2688 8cbbbbf4a9db6a310f044040c7a3a96e 223 SUPERFAMILY SSF161098 13 206 2.75E-44 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 Gene3D G3DSA:1.10.8.60 314 389 4.4E-14 T 17-10-2018 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 SMART SM00448 4 115 1.4E-30 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 SUPERFAMILY SSF52172 3 189 2.13E-39 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 Gene3D G3DSA:3.40.50.2300 1 135 9.2E-34 T 17-10-2018 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 Pfam PF02954 Bacterial regulatory protein, Fis family 400 438 2.6E-10 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 SMART SM00382 165 305 1.1E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 Gene3D G3DSA:3.40.50.300 136 313 2.1E-58 T 17-10-2018 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 Pfam PF00158 Sigma-54 interaction domain 145 308 1.5E-64 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 SUPERFAMILY SSF46689 388 440 9.41E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 Gene3D G3DSA:1.10.10.60 393 439 4.5E-11 T 17-10-2018 FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 SUPERFAMILY SSF52540 145 367 4.8E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2821 d76247d98edf0b650ed83aa5c8285eb1 450 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_3390 98729a12a2fd5f3401b168b1ddc19577 243 SMART SM00079 22 243 0.0027 T 17-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 FORC55_3390 98729a12a2fd5f3401b168b1ddc19577 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 1.7E-64 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3390 98729a12a2fd5f3401b168b1ddc19577 243 Gene3D G3DSA:3.40.190.10 109 201 3.3E-76 T 17-10-2018 FORC55_3390 98729a12a2fd5f3401b168b1ddc19577 243 SMART SM00062 22 243 1.5E-71 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3390 98729a12a2fd5f3401b168b1ddc19577 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 17-10-2018 IPR018313 Solute-binding protein family 3, conserved site FORC55_3390 98729a12a2fd5f3401b168b1ddc19577 243 SUPERFAMILY SSF53850 1 242 3.39E-67 T 17-10-2018 FORC55_3390 98729a12a2fd5f3401b168b1ddc19577 243 Gene3D G3DSA:3.40.190.10 27 240 3.3E-76 T 17-10-2018 FORC55_3390 98729a12a2fd5f3401b168b1ddc19577 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 5.3E-78 T 17-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 543 2.6E-33 T 17-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.5E-9 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.5E-9 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.5E-9 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.5E-9 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.5E-9 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 Pfam PF01433 Peptidase family M1 domain 207 435 5.6E-58 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 17-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 Gene3D G3DSA:1.25.50.10 545 867 4.3E-115 T 17-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 SUPERFAMILY SSF55486 203 449 1.23E-74 T 17-10-2018 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 867 3.1E-114 T 17-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 Gene3D G3DSA:2.60.40.1730 15 193 3.9E-72 T 17-10-2018 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 SUPERFAMILY SSF63737 3 192 7.59E-46 T 17-10-2018 FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 Gene3D G3DSA:2.60.40.1840 443 544 4.3E-36 T 17-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 Gene3D G3DSA:1.10.390.10 279 442 4.4E-65 T 17-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily FORC55_1329 764cdbc182bd79c333c66f4ba481821b 868 Gene3D G3DSA:1.10.1740.60 194 278 1.5E-39 T 17-10-2018 FORC55_3413 73210093d8fe31ae47f2efbc1c21b070 397 SUPERFAMILY SSF51735 42 147 1.32E-5 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3413 73210093d8fe31ae47f2efbc1c21b070 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 318 4.6E-96 T 17-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_3413 73210093d8fe31ae47f2efbc1c21b070 397 Pfam PF07055 Enoyl reductase FAD binding domain 325 388 2.9E-25 T 17-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_3413 73210093d8fe31ae47f2efbc1c21b070 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 5.8E-34 T 17-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_3413 73210093d8fe31ae47f2efbc1c21b070 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 394 50.497 T 17-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_3413 73210093d8fe31ae47f2efbc1c21b070 397 Gene3D G3DSA:3.40.50.720 1 396 1.2E-166 T 17-10-2018 FORC55_1406 92c77b4c84dfecca725e801da622cc66 276 PRINTS PR00147 DNA photolyase signature 107 125 8.3E-6 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_1406 92c77b4c84dfecca725e801da622cc66 276 PRINTS PR00147 DNA photolyase signature 87 103 8.3E-6 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_1406 92c77b4c84dfecca725e801da622cc66 276 Gene3D G3DSA:1.10.579.10 60 253 5.7E-59 T 17-10-2018 FORC55_1406 92c77b4c84dfecca725e801da622cc66 276 SUPERFAMILY SSF48173 1 239 6.8E-68 T 17-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 FORC55_1406 92c77b4c84dfecca725e801da622cc66 276 Pfam PF03441 FAD binding domain of DNA photolyase 37 234 2.7E-56 T 17-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 FORC55_1406 92c77b4c84dfecca725e801da622cc66 276 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 87 99 - T 17-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal FORC55_0536 fd7d7758e878b76aca4809e29b2a0aa2 183 Gene3D G3DSA:3.10.490.10 1 129 6.1E-8 T 17-10-2018 FORC55_0536 fd7d7758e878b76aca4809e29b2a0aa2 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 3.0E-7 T 17-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like FORC55_0536 fd7d7758e878b76aca4809e29b2a0aa2 183 SUPERFAMILY SSF110857 1 123 3.53E-19 T 17-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily FORC55_1614 9e75ba53aa41ecaccf01a601198f74e3 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 17-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 FORC55_1614 9e75ba53aa41ecaccf01a601198f74e3 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 9.1E-103 T 17-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 FORC55_1614 9e75ba53aa41ecaccf01a601198f74e3 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 8.0E-98 T 17-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 FORC55_1614 9e75ba53aa41ecaccf01a601198f74e3 268 Gene3D G3DSA:3.20.20.70 1 268 8.0E-98 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1614 9e75ba53aa41ecaccf01a601198f74e3 268 SUPERFAMILY SSF51366 1 266 3.11E-92 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_1614 9e75ba53aa41ecaccf01a601198f74e3 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.647 T 17-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 FORC55_2454 c46ba3340e09acf866b69c64a0dc1740 162 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 152 3.2E-56 T 17-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 FORC55_2454 c46ba3340e09acf866b69c64a0dc1740 162 PIRSF PIRSF016548 1 162 1.2E-73 T 17-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 FORC55_2454 c46ba3340e09acf866b69c64a0dc1740 162 Gene3D G3DSA:1.20.120.1370 1 155 2.9E-52 T 17-10-2018 IPR038309 Rsd/AlgQ superfamily FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 SMART SM00363 358 423 1.1E-4 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 Pfam PF01479 S4 domain 360 393 2.4E-9 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 Gene3D G3DSA:3.10.290.10 331 424 1.4E-23 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 421 43.446 T 17-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 Gene3D G3DSA:1.10.240.10 228 330 1.7E-34 T 17-10-2018 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 421 4.7E-121 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 9.0E-31 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 9.0E-31 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 9.0E-31 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 9.0E-31 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 Pfam PF00579 tRNA synthetases class I (W and Y) 34 328 1.3E-80 T 17-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 Gene3D G3DSA:3.40.50.620 1 227 1.1E-86 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 SUPERFAMILY SSF52374 5 328 3.32E-96 T 17-10-2018 FORC55_2323 f740c145f227cf4c3cc5ff0add36d5eb 426 SUPERFAMILY SSF55174 326 420 4.32E-16 T 17-10-2018 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 SUPERFAMILY SSF110921 393 498 8.5E-21 T 17-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 SUPERFAMILY SSF51569 1 291 1.45E-100 T 17-10-2018 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 SMART SM00917 369 499 1.5E-28 T 17-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 Gene3D G3DSA:3.20.20.70 1 277 1.1E-107 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 4.7E-237 T 17-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 9.8E-31 T 17-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 17-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 Gene3D G3DSA:1.10.238.260 280 393 3.6E-32 T 17-10-2018 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 Pfam PF00682 HMGL-like 4 273 2.1E-101 T 17-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 17-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.328 T 17-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 FORC55_0388 3e3fdb54913d96941112cbd8c3f8c48c 516 Gene3D G3DSA:3.30.160.270 394 500 2.8E-7 T 17-10-2018 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 PIRSF PIRSF002144 1 92 8.1E-32 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 17-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 17-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 Gene3D G3DSA:3.30.860.10 1 92 6.2E-44 T 17-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0292 e27e0493fa345e5c0619c92bb100427c 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 17-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 Gene3D G3DSA:3.40.980.10 1 172 5.7E-48 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 5.4E-26 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 Pfam PF00994 Probable molybdopterin binding domain 5 170 3.2E-29 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 SUPERFAMILY SSF53218 2 204 3.93E-36 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 109.461 T 17-10-2018 IPR008135 Competence-induced protein CinA FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 396 1.1E-87 T 17-10-2018 IPR008135 Competence-induced protein CinA FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 SUPERFAMILY SSF142433 253 386 3.01E-5 T 17-10-2018 IPR036653 CinA-like, C-terminal FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 PIRSF PIRSF006728 1 392 1.7E-122 T 17-10-2018 IPR008135 Competence-induced protein CinA FORC55_1541 bdec20b97401ce3879a81a52d636454f 412 SMART SM00852 5 172 5.2E-34 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 SUPERFAMILY SSF47413 3 60 2.87E-15 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 Gene3D G3DSA:1.10.260.40 3 60 8.9E-20 T 17-10-2018 FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 Pfam PF13377 Periplasmic binding protein-like domain 168 302 1.8E-18 T 17-10-2018 FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 SUPERFAMILY SSF53822 63 305 4.52E-59 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 303 1.1E-135 T 17-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 17-10-2018 FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 Gene3D G3DSA:3.40.50.2300 163 279 1.5E-64 T 17-10-2018 FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.8E-18 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 SMART SM00354 4 74 6.8E-29 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1861 5c964dad3699b5adf88a9aab8093de60 316 Gene3D G3DSA:3.40.50.2300 68 302 1.5E-64 T 17-10-2018 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 SUPERFAMILY SSF109604 309 495 5.34E-40 T 17-10-2018 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 2.7E-88 T 17-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 Gene3D G3DSA:1.10.3210.10 306 497 1.5E-45 T 17-10-2018 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 SUPERFAMILY SSF53067 135 304 3.7E-42 T 17-10-2018 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 SUPERFAMILY SSF53067 9 129 3.56E-36 T 17-10-2018 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.719 T 17-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 Gene3D G3DSA:3.30.420.150 114 291 1.2E-82 T 17-10-2018 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 PIRSF PIRSF001267 1 497 1.0E-178 T 17-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 FORC55_2476 9da0f6c222f33a625db67ded247429e4 497 Gene3D G3DSA:3.30.420.40 11 299 1.2E-82 T 17-10-2018 FORC55_1530 e694bd3d8b43e3aa34d10f29f29f0959 198 Gene3D G3DSA:3.40.50.10990 5 174 1.9E-64 T 17-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 FORC55_1530 e694bd3d8b43e3aa34d10f29f29f0959 198 Pfam PF00925 GTP cyclohydrolase II 19 171 3.0E-59 T 17-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 FORC55_1530 e694bd3d8b43e3aa34d10f29f29f0959 198 SUPERFAMILY SSF142695 19 172 1.83E-54 T 17-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 FORC55_1530 e694bd3d8b43e3aa34d10f29f29f0959 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 37.91 T 17-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 FORC55_0592 fb3a6002eeb1edcf38ccf8ce2dfd2a4e 217 SUPERFAMILY SSF63380 1 89 1.36E-24 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_0592 fb3a6002eeb1edcf38ccf8ce2dfd2a4e 217 Gene3D G3DSA:2.40.30.20 102 205 1.2E-34 T 17-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_0592 fb3a6002eeb1edcf38ccf8ce2dfd2a4e 217 Gene3D G3DSA:2.40.30.20 1 89 4.0E-27 T 17-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_0592 fb3a6002eeb1edcf38ccf8ce2dfd2a4e 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 4.5E-66 T 17-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0592 fb3a6002eeb1edcf38ccf8ce2dfd2a4e 217 Pfam PF00677 Lumazine binding domain 100 184 1.1E-23 T 17-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0592 fb3a6002eeb1edcf38ccf8ce2dfd2a4e 217 Pfam PF00677 Lumazine binding domain 3 87 7.5E-21 T 17-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0592 fb3a6002eeb1edcf38ccf8ce2dfd2a4e 217 SUPERFAMILY SSF63380 93 197 1.11E-32 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_0592 fb3a6002eeb1edcf38ccf8ce2dfd2a4e 217 PIRSF PIRSF000498 1 211 4.2E-80 T 17-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 SUPERFAMILY SSF55890 323 391 1.83E-9 T 17-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 SUPERFAMILY SSF55874 392 534 2.49E-20 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 Pfam PF00989 PAS fold 217 269 2.8E-6 T 17-10-2018 IPR013767 PAS fold GO:0006355 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 SUPERFAMILY SSF103190 39 169 3.22E-35 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 371 1.9E-8 T 17-10-2018 IPR039506 SpoOB, alpha-helical domain FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 Gene3D G3DSA:3.30.450.20 200 311 1.8E-21 T 17-10-2018 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 SMART SM00387 419 537 1.1E-14 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 1.2E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.2E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.2E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 Gene3D G3DSA:3.30.565.10 379 537 7.8E-22 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 Gene3D G3DSA:3.30.450.20 33 165 1.4E-39 T 17-10-2018 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 536 4.4E-13 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 SUPERFAMILY SSF55785 218 307 3.14E-14 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 Pfam PF17203 Single cache domain 3 37 168 3.0E-18 T 17-10-2018 IPR033463 Single cache domain 3 FORC55_1231 100ee976a165a3a377728742fa2d57b6 538 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 221 269 6.4E-7 T 17-10-2018 IPR000014 PAS domain FORC55_2543 6b392c4c0be5bd3bcb741b30c956b04d 590 Gene3D G3DSA:3.20.20.370 337 576 1.2E-59 T 17-10-2018 FORC55_2543 6b392c4c0be5bd3bcb741b30c956b04d 590 Gene3D G3DSA:3.40.50.2000 166 333 2.5E-6 T 17-10-2018 FORC55_2543 6b392c4c0be5bd3bcb741b30c956b04d 590 SUPERFAMILY SSF53756 10 338 7.22E-34 T 17-10-2018 FORC55_2543 6b392c4c0be5bd3bcb741b30c956b04d 590 Gene3D G3DSA:3.40.50.2000 1 165 6.0E-21 T 17-10-2018 FORC55_2543 6b392c4c0be5bd3bcb741b30c956b04d 590 Pfam PF13439 Glycosyltransferase Family 4 13 157 2.1E-23 T 17-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 FORC55_2543 6b392c4c0be5bd3bcb741b30c956b04d 590 SUPERFAMILY SSF88713 366 563 3.34E-39 T 17-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 FORC55_2543 6b392c4c0be5bd3bcb741b30c956b04d 590 Pfam PF01522 Polysaccharide deacetylase 405 541 1.7E-33 T 17-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 FORC55_0823 c5409457fcbe82eac8fe31a9aac1b431 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.6E-16 T 17-10-2018 IPR009081 Phosphopantetheine binding ACP domain FORC55_0823 c5409457fcbe82eac8fe31a9aac1b431 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.8E-37 T 17-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 FORC55_0823 c5409457fcbe82eac8fe31a9aac1b431 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.852 T 17-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 FORC55_0823 c5409457fcbe82eac8fe31a9aac1b431 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 17-10-2018 IPR006162 Phosphopantetheine attachment site FORC55_0823 c5409457fcbe82eac8fe31a9aac1b431 78 SUPERFAMILY SSF47336 2 76 7.07E-24 T 17-10-2018 IPR036736 ACP-like superfamily FORC55_0823 c5409457fcbe82eac8fe31a9aac1b431 78 Gene3D G3DSA:1.10.1200.10 1 76 2.2E-30 T 17-10-2018 IPR036736 ACP-like superfamily FORC55_1669 6c4f26552e5b4d8d0bf25aea34c5d59f 231 SUPERFAMILY SSF52540 1 215 6.49E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1669 6c4f26552e5b4d8d0bf25aea34c5d59f 231 Pfam PF13500 AAA domain 4 212 1.1E-37 T 17-10-2018 FORC55_1669 6c4f26552e5b4d8d0bf25aea34c5d59f 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 28.583 T 17-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 FORC55_1669 6c4f26552e5b4d8d0bf25aea34c5d59f 231 Gene3D G3DSA:3.40.50.300 3 224 2.7E-64 T 17-10-2018 FORC55_1669 6c4f26552e5b4d8d0bf25aea34c5d59f 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.6E-52 T 17-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 FORC55_1669 6c4f26552e5b4d8d0bf25aea34c5d59f 231 PIRSF PIRSF006755 1 229 1.8E-71 T 17-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 Gene3D G3DSA:2.60.40.2540 22 175 6.3E-58 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 Gene3D G3DSA:3.30.1330.60 176 294 3.3E-35 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 Pfam PF00691 OmpA family 192 283 1.1E-16 T 17-10-2018 IPR006665 OmpA-like domain FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 SUPERFAMILY SSF103088 158 288 2.75E-24 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 1.1E-130 T 17-10-2018 FORC55_1770 151cbc20b078865c63c9dd3914b6722d 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.1E-130 T 17-10-2018 FORC55_3152 0f7d126493807a84870d499a55853080 393 PRINTS PR00799 Aspartate aminotransferase signature 270 295 9.3E-29 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 FORC55_3152 0f7d126493807a84870d499a55853080 393 PRINTS PR00799 Aspartate aminotransferase signature 338 356 9.3E-29 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 FORC55_3152 0f7d126493807a84870d499a55853080 393 PRINTS PR00799 Aspartate aminotransferase signature 172 191 9.3E-29 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 FORC55_3152 0f7d126493807a84870d499a55853080 393 PRINTS PR00799 Aspartate aminotransferase signature 203 215 9.3E-29 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 FORC55_3152 0f7d126493807a84870d499a55853080 393 Gene3D G3DSA:3.90.1150.10 11 389 1.2E-139 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3152 0f7d126493807a84870d499a55853080 393 SUPERFAMILY SSF53383 1 390 3.02E-99 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3152 0f7d126493807a84870d499a55853080 393 Gene3D G3DSA:3.40.640.10 45 312 1.2E-139 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3152 0f7d126493807a84870d499a55853080 393 Pfam PF00155 Aminotransferase class I and II 27 389 5.5E-67 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 SUPERFAMILY SSF46689 184 231 9.41E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 SUPERFAMILY SSF46689 234 283 1.12E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 SMART SM00342 197 280 1.3E-29 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.4E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.4E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 Pfam PF12833 Helix-turn-helix domain 203 282 3.7E-20 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 Pfam PF02311 AraC-like ligand binding domain 44 153 1.4E-4 T 17-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 Gene3D G3DSA:1.10.10.60 232 285 1.9E-15 T 17-10-2018 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 Gene3D G3DSA:1.10.10.60 177 231 3.7E-11 T 17-10-2018 FORC55_3651 7a6ca02534db1cf10a2f64e457ee090d 287 Gene3D G3DSA:2.60.120.10 34 107 2.9E-5 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 2.0E-151 T 17-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 49.931 T 17-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 Pfam PF00483 Nucleotidyl transferase 6 273 3.1E-62 T 17-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 17-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 17-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 Gene3D G3DSA:2.160.10.10 287 403 5.1E-34 T 17-10-2018 FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 SUPERFAMILY SSF53448 4 357 3.75E-68 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 Gene3D G3DSA:3.90.550.10 2 286 2.2E-85 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 17-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_1035 822b0b35c4b884a5c2a470d5aafd0aec 405 SUPERFAMILY SSF51161 293 401 3.74E-20 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 Gene3D G3DSA:3.40.50.2300 1 124 9.8E-40 T 17-10-2018 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 Pfam PF00072 Response regulator receiver domain 6 115 9.0E-28 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 SMART SM00382 161 312 1.4E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 SMART SM00448 4 115 3.6E-31 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 SUPERFAMILY SSF46689 381 465 3.23E-19 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 Pfam PF02954 Bacterial regulatory protein, Fis family 425 465 1.1E-15 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 465 1.1E-248 T 17-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 Gene3D G3DSA:3.40.50.300 126 311 5.1E-68 T 17-10-2018 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 SUPERFAMILY SSF52172 2 186 1.42E-42 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 Gene3D G3DSA:1.10.10.60 380 466 2.6E-26 T 17-10-2018 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 Gene3D G3DSA:1.10.8.60 312 379 1.1E-17 T 17-10-2018 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 Pfam PF00158 Sigma-54 interaction domain 141 308 3.6E-71 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 SUPERFAMILY SSF52540 140 384 8.75E-75 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 448 1.8E-7 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_0137 e17ba4e9b5cff6ac7398acf6ce281344 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 448 466 1.8E-7 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2741 218dc04aa1c67ebada9f6b0a80bfb5f3 82 Pfam PF04728 Lipoprotein leucine-zipper 30 82 2.2E-23 T 17-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 FORC55_2741 218dc04aa1c67ebada9f6b0a80bfb5f3 82 SUPERFAMILY SSF58042 27 81 3.27E-16 T 17-10-2018 FORC55_2741 218dc04aa1c67ebada9f6b0a80bfb5f3 82 Gene3D G3DSA:1.20.5.190 26 81 9.4E-13 T 17-10-2018 FORC55_2741 218dc04aa1c67ebada9f6b0a80bfb5f3 82 PIRSF PIRSF002855 1 82 1.7E-35 T 17-10-2018 IPR016367 Murein-lipoprotein FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 6.9E-20 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 Gene3D G3DSA:1.10.10.10 148 209 1.4E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 SUPERFAMILY SSF46894 139 206 5.78E-20 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 SUPERFAMILY SSF52172 4 130 4.84E-25 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 SMART SM00421 147 204 7.3E-23 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 Gene3D G3DSA:3.40.50.2300 3 132 7.6E-26 T 17-10-2018 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 Pfam PF00072 Response regulator receiver domain 7 120 6.2E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0188 d1a9a0968275b38f205c944f2234c272 209 SMART SM00448 5 119 9.9E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Pfam PF00072 Response regulator receiver domain 712 826 3.2E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Gene3D G3DSA:1.10.287.130 456 534 5.5E-25 T 17-10-2018 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Pfam PF01627 Hpt domain 901 978 1.2E-9 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 SUPERFAMILY SSF47384 457 535 1.96E-20 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 980 0.0 T 17-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Gene3D G3DSA:1.20.58.920 180 319 5.7E-52 T 17-10-2018 IPR038188 TorS, sensor domain superfamily FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Gene3D G3DSA:1.20.58.920 47 179 1.5E-47 T 17-10-2018 IPR038188 TorS, sensor domain superfamily FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.3E-19 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 692 2.0E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 690 6.7E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 671 6.7E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 6.7E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 6.7E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 SUPERFAMILY SSF47226 875 978 2.62E-17 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 SMART SM00304 360 412 1.4E-4 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 PIRSF PIRSF036437 1 984 0.0 T 17-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Gene3D G3DSA:1.20.1480.50 320 417 4.2E-6 T 17-10-2018 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 SMART SM00388 469 534 6.3E-24 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 SUPERFAMILY SSF55874 523 696 1.28E-47 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 SMART SM00448 710 826 2.9E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Pfam PF00672 HAMP domain 360 408 3.1E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 SUPERFAMILY SSF52172 711 831 4.41E-30 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 SMART SM00387 581 693 1.4E-39 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Gene3D G3DSA:3.30.565.10 535 695 9.1E-50 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Gene3D G3DSA:3.40.50.2300 706 833 9.8E-31 T 17-10-2018 FORC55_3347 eaaa11443716e92c3cf4c4d8f7bee993 984 Gene3D G3DSA:1.20.120.160 869 983 2.4E-16 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_1449 9cd99b59a48c543ea627750d6f486b3e 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 78 7.9E-16 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 FORC55_1449 9cd99b59a48c543ea627750d6f486b3e 214 Pfam PF14497 Glutathione S-transferase, C-terminal domain 126 203 2.1E-7 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal FORC55_1449 9cd99b59a48c543ea627750d6f486b3e 214 SUPERFAMILY SSF47616 84 212 5.12E-33 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily FORC55_1449 9cd99b59a48c543ea627750d6f486b3e 214 Gene3D G3DSA:1.20.1050.10 87 214 1.0E-49 T 17-10-2018 FORC55_1449 9cd99b59a48c543ea627750d6f486b3e 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 213 1.2E-94 T 17-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 FORC55_1449 9cd99b59a48c543ea627750d6f486b3e 214 SUPERFAMILY SSF52833 2 88 2.7E-23 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_1449 9cd99b59a48c543ea627750d6f486b3e 214 Gene3D G3DSA:3.40.30.10 5 82 3.9E-26 T 17-10-2018 FORC55_2563 b48a836b153c9fa459139f17c082f638 55 Pfam PF00471 Ribosomal protein L33 7 53 5.7E-17 T 17-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2563 b48a836b153c9fa459139f17c082f638 55 SUPERFAMILY SSF57829 1 53 2.69E-19 T 17-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 FORC55_2563 b48a836b153c9fa459139f17c082f638 55 Gene3D G3DSA:2.20.28.120 1 55 2.8E-30 T 17-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2563 b48a836b153c9fa459139f17c082f638 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.747 T 17-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2563 b48a836b153c9fa459139f17c082f638 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 17-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2563 b48a836b153c9fa459139f17c082f638 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 2.5E-25 T 17-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 119 134 - T 17-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 Gene3D G3DSA:3.40.1030.10 76 328 6.7E-128 T 17-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 SUPERFAMILY SSF47648 10 76 2.49E-21 T 17-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 Gene3D G3DSA:1.20.970.10 13 201 6.7E-128 T 17-10-2018 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 SUPERFAMILY SSF52418 79 339 1.2E-88 T 17-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 9 431 1.9E-215 T 17-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 11 429 1.7E-160 T 17-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 Pfam PF00591 Glycosyl transferase family, a/b domain 86 315 2.1E-49 T 17-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 356 429 2.2E-23 T 17-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 Hamap MF_01628 Thymidine phosphorylase [deoA]. 8 443 45.893 T 17-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 SUPERFAMILY SSF54680 343 441 1.31E-28 T 17-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 SMART SM00941 356 430 5.1E-28 T 17-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 Pfam PF02885 Glycosyl transferase family, helical bundle domain 12 73 1.2E-20 T 17-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 Gene3D G3DSA:3.90.1170.30 343 437 2.3E-29 T 17-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0522 628e31d2bdd1b16d54bfa8866eff0467 448 PIRSF PIRSF000478 8 442 7.3E-151 T 17-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_2907 617509db14e317d41f2d057ea11202a5 659 Pfam PF00593 TonB dependent receptor 233 657 5.1E-38 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel FORC55_2907 617509db14e317d41f2d057ea11202a5 659 Gene3D G3DSA:2.170.130.10 38 145 1.9E-31 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily FORC55_2907 617509db14e317d41f2d057ea11202a5 659 Gene3D G3DSA:2.40.170.20 147 659 1.7E-101 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_2907 617509db14e317d41f2d057ea11202a5 659 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 133 9.1E-14 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_2907 617509db14e317d41f2d057ea11202a5 659 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 42 659 5.9E-129 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 FORC55_2907 617509db14e317d41f2d057ea11202a5 659 SUPERFAMILY SSF56935 23 659 4.4E-79 T 17-10-2018 FORC55_2907 617509db14e317d41f2d057ea11202a5 659 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 642 659 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 SUPERFAMILY SSF52821 399 482 3.84E-13 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 SUPERFAMILY SSF143437 1 173 3.14E-45 T 17-10-2018 FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 SUPERFAMILY SSF52402 174 372 1.19E-42 T 17-10-2018 FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 3.3E-109 T 17-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 Gene3D G3DSA:3.30.2130.30 1 174 1.4E-30 T 17-10-2018 FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 SMART SM00981 75 165 3.2E-20 T 17-10-2018 IPR004114 THUMP domain GO:0003723 FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 Gene3D G3DSA:3.40.250.10 398 483 4.9E-11 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 483 1.7E-39 T 17-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 Gene3D G3DSA:3.40.50.620 175 397 6.9E-51 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.9E-72 T 17-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 218.388 T 17-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 FORC55_1875 5879dd81a9a396cc30cf94e87ba6f49b 483 Pfam PF02926 THUMP domain 52 157 1.8E-21 T 17-10-2018 IPR004114 THUMP domain GO:0003723 FORC55_1083 5e37f6ea1590970f6fa21fb59762edd7 225 Gene3D G3DSA:2.10.109.10 91 219 4.9E-38 T 17-10-2018 FORC55_1083 5e37f6ea1590970f6fa21fb59762edd7 225 Pfam PF00717 Peptidase S24-like 135 199 2.0E-16 T 17-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C FORC55_1083 5e37f6ea1590970f6fa21fb59762edd7 225 SUPERFAMILY SSF47413 1 76 4.61E-5 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_1083 5e37f6ea1590970f6fa21fb59762edd7 225 SUPERFAMILY SSF51306 96 220 1.23E-25 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily FORC55_1083 5e37f6ea1590970f6fa21fb59762edd7 225 Gene3D G3DSA:1.10.260.40 1 78 4.0E-11 T 17-10-2018 FORC55_2299 a6acf5ccb6ddac8f3df74da5fbb4e7f0 586 Gene3D G3DSA:3.40.630.30 313 456 4.2E-7 T 17-10-2018 FORC55_2299 a6acf5ccb6ddac8f3df74da5fbb4e7f0 586 SMART SM00563 75 199 5.5E-14 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_2299 a6acf5ccb6ddac8f3df74da5fbb4e7f0 586 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 1.8E-22 T 17-10-2018 FORC55_2299 a6acf5ccb6ddac8f3df74da5fbb4e7f0 586 SUPERFAMILY SSF69593 61 250 2.88E-6 T 17-10-2018 FORC55_2299 a6acf5ccb6ddac8f3df74da5fbb4e7f0 586 Pfam PF01553 Acyltransferase 66 196 9.8E-5 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_2299 a6acf5ccb6ddac8f3df74da5fbb4e7f0 586 SUPERFAMILY SSF55729 312 452 1.64E-23 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 730 847 8.5E-25 T 17-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 Pfam PF00361 Proton-conducting membrane transporter 80 364 1.4E-57 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 15 66 1.2E-11 T 17-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 57 77 2.6E-34 T 17-10-2018 FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 29 54 2.6E-34 T 17-10-2018 FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 192 218 2.6E-34 T 17-10-2018 FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 260 272 2.6E-34 T 17-10-2018 FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 170 191 2.6E-34 T 17-10-2018 FORC55_2837 0d0b5d2130cec4e573502a1f0f6760d7 858 Pfam PF13244 Domain of unknown function (DUF4040) 562 625 2.2E-13 T 17-10-2018 IPR025383 Domain of unknown function DUF4040 FORC55_3675 fe9b621f68f790bea34a84535e2a00c1 263 SUPERFAMILY SSF161098 65 253 3.66E-21 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3675 fe9b621f68f790bea34a84535e2a00c1 263 Gene3D G3DSA:1.10.3720.10 61 260 2.9E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3675 fe9b621f68f790bea34a84535e2a00c1 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 258 2.2E-19 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 Gene3D G3DSA:2.40.37.10 32 590 6.8E-238 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 94 364 2.5E-52 T 17-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 Gene3D G3DSA:1.20.58.930 386 481 6.8E-238 T 17-10-2018 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 21 653 42.479 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PIRSF PIRSF001336 13 654 1.4E-251 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 116 134 6.7E-13 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 563 576 6.7E-13 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 354 373 6.7E-13 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 260 273 6.7E-13 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 108 122 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 510 535 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 217 239 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 344 361 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 193 214 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 485 506 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 167 182 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 563 584 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 PRINTS PR01180 Arginine decarboxylase signature 84 99 2.3E-64 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 TIGRFAM TIGR01273 speA: arginine decarboxylase 25 652 6.2E-279 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 FORC55_3434 b63a08856b8050c47f057025e58b581d 654 SUPERFAMILY SSF51419 84 366 4.49E-65 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_3434 b63a08856b8050c47f057025e58b581d 654 Gene3D G3DSA:3.20.20.10 85 369 6.8E-238 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_0911 4777715a596df96184c2e10c1e6dabb4 103 SUPERFAMILY SSF47781 28 101 1.09E-27 T 17-10-2018 IPR010994 RuvA domain 2-like FORC55_0911 4777715a596df96184c2e10c1e6dabb4 103 SMART SM00278 51 70 13.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_0911 4777715a596df96184c2e10c1e6dabb4 103 SMART SM00278 81 100 57.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_0911 4777715a596df96184c2e10c1e6dabb4 103 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 102 6.1E-26 T 17-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain FORC55_0911 4777715a596df96184c2e10c1e6dabb4 103 Gene3D G3DSA:1.10.150.280 29 103 3.2E-24 T 17-10-2018 FORC55_0911 4777715a596df96184c2e10c1e6dabb4 103 Pfam PF12836 Helix-hairpin-helix motif 41 101 3.4E-22 T 17-10-2018 FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 Gene3D G3DSA:2.60.40.1180 481 561 1.2E-13 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 Gene3D G3DSA:3.20.20.80 175 480 7.9E-115 T 17-10-2018 FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 556 7.9E-265 T 17-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 SUPERFAMILY SSF51011 480 558 6.93E-14 T 17-10-2018 FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 SUPERFAMILY SSF51445 8 475 7.37E-163 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 Gene3D G3DSA:3.90.400.10 112 174 1.6E-30 T 17-10-2018 FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 Pfam PF00128 Alpha amylase, catalytic domain 33 375 1.1E-129 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 Gene3D G3DSA:3.20.20.80 2 111 3.1E-51 T 17-10-2018 FORC55_1859 1197b222c18a75f57fe2957eb913d7eb 562 SMART SM00642 18 419 3.2E-166 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 17-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SUPERFAMILY SSF56719 395 796 6.54E-88 T 17-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Pfam PF00204 DNA gyrase B 221 391 2.3E-61 T 17-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.10.20.690 593 684 6.4E-38 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.30.565.10 1 220 1.3E-94 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.40.50.670 705 804 4.5E-27 T 17-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SUPERFAMILY SSF55874 4 213 1.57E-76 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 3.6E-71 T 17-10-2018 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SUPERFAMILY SSF54211 221 393 3.41E-59 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 109.225 T 17-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 6.1E-31 T 17-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Pfam PF01751 Toprim domain 420 532 1.1E-18 T 17-10-2018 IPR006171 TOPRIM domain FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.30.230.10 221 393 5.0E-75 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.2E-87 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.40.50.670 399 571 2.4E-75 T 17-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SMART SM00387 31 175 3.8E-29 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 17-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SMART SM00433 35 798 6.2E-275 T 17-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0004 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 8.6E-23 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 Pfam PF09312 SurA N-terminal domain 27 144 1.7E-40 T 17-10-2018 IPR015391 SurA N-terminal FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 Gene3D G3DSA:1.10.4030.10 24 150 1.1E-34 T 17-10-2018 FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 SUPERFAMILY SSF109998 27 200 4.19E-37 T 17-10-2018 IPR027304 Trigger factor/SurA domain superfamily FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 Gene3D G3DSA:3.10.50.40 281 383 2.6E-76 T 17-10-2018 FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 Hamap MF_01183 Chaperone SurA [surA]. 11 426 31.808 T 17-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 Pfam PF13616 PPIC-type PPIASE domain 279 381 8.3E-23 T 17-10-2018 FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 Pfam PF13616 PPIC-type PPIASE domain 166 272 6.3E-22 T 17-10-2018 FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 SUPERFAMILY SSF54534 175 273 4.45E-25 T 17-10-2018 FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 SUPERFAMILY SSF54534 281 383 7.2E-30 T 17-10-2018 FORC55_2343 2f3799a645f55d99a26cbec044be6dd3 431 Gene3D G3DSA:3.10.50.40 177 384 2.6E-76 T 17-10-2018 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 Gene3D G3DSA:1.10.10.10 214 284 6.0E-16 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 Gene3D G3DSA:1.20.120.1810 8 122 3.4E-27 T 17-10-2018 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 SUPERFAMILY SSF88659 198 283 2.24E-19 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 7.9E-19 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 7.9E-19 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 233 245 7.9E-19 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 7.9E-19 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF04545 Sigma-70, region 4 229 281 7.1E-16 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 2.6E-34 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.881 T 17-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 1.8E-126 T 17-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.4E-8 T 17-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF04542 Sigma-70 region 2 53 122 1.2E-16 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0124 5f6c6ad2c242f9c2649c91f3b925fb80 286 SUPERFAMILY SSF88946 11 122 6.02E-40 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_1835 590e1fbeb4b51feb628e8b41669402ca 737 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 520 723 1.1E-45 T 17-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 FORC55_1835 590e1fbeb4b51feb628e8b41669402ca 737 Gene3D G3DSA:3.40.50.300 462 732 9.9E-70 T 17-10-2018 FORC55_1835 590e1fbeb4b51feb628e8b41669402ca 737 Pfam PF02706 Chain length determinant protein 12 101 7.2E-11 T 17-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 FORC55_1835 590e1fbeb4b51feb628e8b41669402ca 737 Pfam PF13614 AAA domain 548 684 3.0E-12 T 17-10-2018 IPR025669 AAA domain FORC55_1835 590e1fbeb4b51feb628e8b41669402ca 737 SUPERFAMILY SSF52540 538 723 3.68E-36 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1835 590e1fbeb4b51feb628e8b41669402ca 737 Pfam PF13807 G-rich domain on putative tyrosine kinase 397 468 3.8E-10 T 17-10-2018 IPR032807 Tyrosine kinase, G-rich domain FORC55_3405 d5df50f48ecebbfa9aebcffded9207d7 246 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 246 42.889 T 17-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 FORC55_3405 d5df50f48ecebbfa9aebcffded9207d7 246 Gene3D G3DSA:3.20.20.370 1 246 3.2E-102 T 17-10-2018 FORC55_3405 d5df50f48ecebbfa9aebcffded9207d7 246 SUPERFAMILY SSF88713 5 245 4.37E-94 T 17-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 FORC55_3405 d5df50f48ecebbfa9aebcffded9207d7 246 Pfam PF03746 LamB/YcsF family 6 245 4.8E-98 T 17-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 10 492 2.9E-93 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 1.2E-46 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 1.2E-46 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 1.2E-46 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 1.2E-46 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 1.2E-46 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 1.2E-46 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 1.2E-46 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 PIRSF PIRSF006615 1 494 1.0E-198 T 17-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 SUPERFAMILY SSF55486 1 493 8.91E-122 T 17-10-2018 FORC55_1396 ef111d2f580561d075acb54a91cbc17f 494 Gene3D G3DSA:1.10.1370.30 1 494 1.4E-199 T 17-10-2018 FORC55_2962 c1e4ea36dfbf85e7dd146830a3c98ce4 586 PIRSF PIRSF037343 1 581 5.9E-282 T 17-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted FORC55_2962 c1e4ea36dfbf85e7dd146830a3c98ce4 586 SUPERFAMILY SSF52794 490 578 1.26E-13 T 17-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 FORC55_2962 c1e4ea36dfbf85e7dd146830a3c98ce4 586 Gene3D G3DSA:3.40.50.2300 489 579 1.1E-17 T 17-10-2018 FORC55_2962 c1e4ea36dfbf85e7dd146830a3c98ce4 586 Pfam PF03611 PTS system sugar-specific permease component 15 407 1.3E-122 T 17-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 FORC55_2962 c1e4ea36dfbf85e7dd146830a3c98ce4 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 491 564 5.3E-12 T 17-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 FORC55_2285 ec771649969c8c9833bd2f58415be98b 232 SUPERFAMILY SSF53448 3 226 5.63E-63 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2285 ec771649969c8c9833bd2f58415be98b 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 101 108 - T 17-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 FORC55_2285 ec771649969c8c9833bd2f58415be98b 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 226 2.1E-77 T 17-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 FORC55_2285 ec771649969c8c9833bd2f58415be98b 232 Gene3D G3DSA:3.90.550.10 1 231 1.4E-73 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2285 ec771649969c8c9833bd2f58415be98b 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 225 3.8E-72 T 17-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 FORC55_2285 ec771649969c8c9833bd2f58415be98b 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 225 43.185 T 17-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 9.1E-80 T 17-10-2018 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 508 2.2E-132 T 17-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 SUPERFAMILY SSF69255 369 456 6.8E-34 T 17-10-2018 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 Gene3D G3DSA:3.55.50.10 104 195 2.3E-89 T 17-10-2018 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 Gene3D G3DSA:2.30.110.50 13 336 2.3E-89 T 17-10-2018 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 SUPERFAMILY SSF69279 197 370 3.4E-44 T 17-10-2018 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 Gene3D G3DSA:3.30.1920.30 228 291 2.3E-89 T 17-10-2018 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 SUPERFAMILY SSF69279 6 191 4.21E-54 T 17-10-2018 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 SUPERFAMILY SSF69349 447 628 1.02E-45 T 17-10-2018 FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 Gene3D G3DSA:2.40.50.230 362 461 4.0E-42 T 17-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily FORC55_1926 4a2d9b61e1d5a0c0f3c7d93274f21e73 658 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 525 1.0E-192 T 17-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 PIRSF PIRSF000521 173 402 2.1E-37 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 PIRSF PIRSF000521 24 157 6.5E-7 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 Gene3D G3DSA:3.90.1150.10 29 392 6.1E-148 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 2.2E-209 T 17-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 Gene3D G3DSA:3.40.640.10 59 304 6.1E-148 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 SUPERFAMILY SSF53383 16 399 3.4E-127 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 Pfam PF00202 Aminotransferase class-III 22 399 4.5E-127 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 5.6E-149 T 17-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 FORC55_0266 3cc241b83b7cdaf0ac9af7e83433f500 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 68.788 T 17-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 FORC55_1895 6bb3af543609ab4c9eb82922b9ce4443 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 26.875 T 17-10-2018 IPR009624 Uncharacterised protein family UPF0253 FORC55_1895 6bb3af543609ab4c9eb82922b9ce4443 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 4.0E-15 T 17-10-2018 IPR009624 Uncharacterised protein family UPF0253 FORC55_1895 6bb3af543609ab4c9eb82922b9ce4443 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 6.9E-34 T 17-10-2018 IPR009624 Uncharacterised protein family UPF0253 FORC55_1040 859879b349c09acc55eb3b7841a61cea 195 Gene3D G3DSA:1.10.150.20 115 195 2.9E-24 T 17-10-2018 FORC55_1040 859879b349c09acc55eb3b7841a61cea 195 Pfam PF04994 TfoX C-terminal domain 115 194 1.7E-32 T 17-10-2018 IPR007077 TfoX, C-terminal FORC55_1040 859879b349c09acc55eb3b7841a61cea 195 Pfam PF04993 TfoX N-terminal domain 12 103 3.5E-30 T 17-10-2018 IPR007076 TfoX, N-terminal FORC55_1040 859879b349c09acc55eb3b7841a61cea 195 SUPERFAMILY SSF159894 6 103 3.92E-31 T 17-10-2018 FORC55_1040 859879b349c09acc55eb3b7841a61cea 195 Gene3D G3DSA:3.30.1460.30 1 105 3.8E-37 T 17-10-2018 FORC55_1040 859879b349c09acc55eb3b7841a61cea 195 PIRSF PIRSF028788 1 195 3.8E-48 T 17-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 803 1.0E-281 T 17-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Gene3D G3DSA:3.10.20.310 264 346 3.6E-12 T 17-10-2018 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF07244 Surface antigen variable number repeat 266 344 1.2E-9 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF07244 Surface antigen variable number repeat 347 420 1.2E-15 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF07244 Surface antigen variable number repeat 92 172 2.2E-11 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF07244 Surface antigen variable number repeat 176 263 6.8E-16 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Gene3D G3DSA:3.10.20.310 18 91 8.8E-20 T 17-10-2018 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Gene3D G3DSA:2.40.160.50 425 803 9.4E-121 T 17-10-2018 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Gene3D G3DSA:3.10.20.310 348 424 5.2E-25 T 17-10-2018 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Gene3D G3DSA:3.10.20.310 175 263 6.1E-23 T 17-10-2018 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF01103 Surface antigen 448 803 8.4E-90 T 17-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 PIRSF PIRSF006076 1 803 1.6E-244 T 17-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 803 25.766 T 17-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 FORC55_0609 45d60711d45dbee0dfdf94e6c299bafc 803 Gene3D G3DSA:3.10.20.310 92 174 6.7E-17 T 17-10-2018 FORC55_2219 410067260bc55192a0eb607d82822803 777 Pfam PF00912 Transglycosylase 176 347 4.0E-58 T 17-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_2219 410067260bc55192a0eb607d82822803 777 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 180 714 1.6E-158 T 17-10-2018 FORC55_2219 410067260bc55192a0eb607d82822803 777 Pfam PF00905 Penicillin binding protein transpeptidase domain 439 677 8.9E-22 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 FORC55_2219 410067260bc55192a0eb607d82822803 777 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 35 758 0.0 T 17-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_2219 410067260bc55192a0eb607d82822803 777 SUPERFAMILY SSF56601 329 771 6.39E-112 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_2219 410067260bc55192a0eb607d82822803 777 SUPERFAMILY SSF53955 171 369 1.07E-68 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_2219 410067260bc55192a0eb607d82822803 777 Pfam PF14814 Bifunctional transglycosylase second domain 80 164 5.7E-27 T 17-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_2219 410067260bc55192a0eb607d82822803 777 Gene3D G3DSA:3.40.710.10 70 727 4.8E-266 T 17-10-2018 FORC55_2219 410067260bc55192a0eb607d82822803 777 PIRSF PIRSF002799 2 777 0.0 T 17-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_2219 410067260bc55192a0eb607d82822803 777 Gene3D G3DSA:3.30.2060.10 78 167 4.8E-266 T 17-10-2018 FORC55_2219 410067260bc55192a0eb607d82822803 777 Gene3D G3DSA:1.10.3810.10 168 371 4.8E-266 T 17-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 Gene3D G3DSA:3.30.930.10 109 464 1.3E-109 T 17-10-2018 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 4.7E-205 T 17-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 SUPERFAMILY SSF50249 15 101 1.59E-16 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 4.4E-81 T 17-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 Gene3D G3DSA:2.40.50.140 4 105 2.5E-19 T 17-10-2018 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.0E-10 T 17-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 SUPERFAMILY SSF55681 97 464 1.31E-95 T 17-10-2018 FORC55_1497 b4187457b86aa214eb4692e966bdb297 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.739 T 17-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 Gene3D G3DSA:3.40.50.10260 4 216 6.8E-61 T 17-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 225 491 22.064 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 Pfam PF03853 YjeF-related protein N-terminus 30 189 8.4E-47 T 17-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 Pfam PF01256 Carbohydrate kinase 249 483 5.1E-57 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 SUPERFAMILY SSF64153 6 246 1.05E-66 T 17-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 PIRSF PIRSF017184 5 491 3.4E-133 T 17-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 9 210 3.8E-49 T 17-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 Gene3D G3DSA:3.40.1190.20 224 491 7.8E-82 T 17-10-2018 IPR029056 Ribokinase-like FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 210 23.185 T 17-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 489 1.7E-65 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 SUPERFAMILY SSF53613 227 490 5.77E-76 T 17-10-2018 IPR029056 Ribokinase-like FORC55_2870 4a92281c41b2b7749d59c66161ebeba3 491 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 430 440 - T 17-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site FORC55_0350 0d24036f76d2b2eaa04711bdadd7ecf7 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_0350 0d24036f76d2b2eaa04711bdadd7ecf7 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 7.5E-37 T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_0350 0d24036f76d2b2eaa04711bdadd7ecf7 148 SUPERFAMILY SSF55804 1 146 8.89E-40 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_0350 0d24036f76d2b2eaa04711bdadd7ecf7 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 5.2E-52 T 17-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 FORC55_0350 0d24036f76d2b2eaa04711bdadd7ecf7 148 Gene3D G3DSA:3.40.930.10 1 148 1.0E-52 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 SUPERFAMILY SSF64518 1 376 1.7E-96 T 17-10-2018 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 Gene3D G3DSA:1.20.1330.10 45 172 8.3E-73 T 17-10-2018 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 Gene3D G3DSA:1.10.8.410 329 376 5.1E-20 T 17-10-2018 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 Gene3D G3DSA:1.20.1330.10 190 328 1.6E-18 T 17-10-2018 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 6.9E-25 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 Gene3D G3DSA:1.20.58.1830 5 33 8.3E-73 T 17-10-2018 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.4E-41 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 Pfam PF07196 Flagellin hook IN motif 194 249 2.9E-11 T 17-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0708 3ffece2b3d87711ca51db396555cb089 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0422 584d03b3729f73218c118512b87ff172 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 407 1.4E-30 T 17-10-2018 IPR000160 GGDEF domain FORC55_0422 584d03b3729f73218c118512b87ff172 430 SUPERFAMILY SSF55073 253 409 1.49E-35 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0422 584d03b3729f73218c118512b87ff172 430 SMART SM00267 230 409 2.9E-35 T 17-10-2018 IPR000160 GGDEF domain FORC55_0422 584d03b3729f73218c118512b87ff172 430 Gene3D G3DSA:3.30.70.270 244 417 8.9E-43 T 17-10-2018 FORC55_0422 584d03b3729f73218c118512b87ff172 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 403 2.2E-34 T 17-10-2018 IPR000160 GGDEF domain FORC55_0422 584d03b3729f73218c118512b87ff172 430 Gene3D G3DSA:1.20.1480.50 134 234 3.4E-5 T 17-10-2018 FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SMART SM00495 792 837 1.0E-9 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SMART SM00636 156 572 2.8E-161 T 17-10-2018 IPR011583 Chitinase II GO:0008061 FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SUPERFAMILY SSF49299 594 687 1.43E-10 T 17-10-2018 IPR035986 PKD domain superfamily FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SUPERFAMILY SSF49299 694 781 3.14E-6 T 17-10-2018 IPR035986 PKD domain superfamily FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 Gene3D G3DSA:2.60.40.10 19 129 1.0E-43 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SMART SM00089 52 131 0.97 T 17-10-2018 IPR022409 PKD/Chitinase domain FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SMART SM00089 598 688 4.6E-10 T 17-10-2018 IPR022409 PKD/Chitinase domain FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SMART SM00089 698 784 0.053 T 17-10-2018 IPR022409 PKD/Chitinase domain FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 ProSitePatterns PS01095 Chitinases family 18 active site. 304 312 - T 17-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SUPERFAMILY SSF51055 791 838 5.1E-13 T 17-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 Gene3D G3DSA:3.20.20.80 159 574 5.5E-173 T 17-10-2018 FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 Gene3D G3DSA:2.60.40.10 595 692 9.0E-25 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SUPERFAMILY SSF54556 458 543 2.66E-16 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 Gene3D G3DSA:2.10.10.20 792 835 1.8E-15 T 17-10-2018 FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SUPERFAMILY SSF81296 18 130 2.94E-31 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 Gene3D G3DSA:3.10.50.10 463 548 5.5E-173 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 Gene3D G3DSA:2.60.40.10 693 782 1.6E-12 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 SUPERFAMILY SSF51445 132 586 2.95E-89 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 Pfam PF08329 Chitinase A, N-terminal domain 17 151 2.3E-54 T 17-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 FORC55_2714 42f0e89ab68858d08d2f24418f727aa5 845 Pfam PF00704 Glycosyl hydrolases family 18 158 572 5.6E-88 T 17-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 FORC55_3641 946b7cac9884be5437da741d1a027234 439 Pfam PF13520 Amino acid permease 8 403 2.9E-47 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 FORC55_3641 946b7cac9884be5437da741d1a027234 439 PIRSF PIRSF006060 1 437 5.3E-48 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 FORC55_3641 946b7cac9884be5437da741d1a027234 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 436 3.7E-134 T 17-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 FORC55_3641 946b7cac9884be5437da741d1a027234 439 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 35.396 T 17-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 FORC55_3641 946b7cac9884be5437da741d1a027234 439 Gene3D G3DSA:1.20.1740.10 1 438 1.9E-60 T 17-10-2018 FORC55_3641 946b7cac9884be5437da741d1a027234 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 427 1.4E-226 T 17-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 FORC55_3182 f8d04cd7e56407130f8f7184edccc211 318 Pfam PF03741 Integral membrane protein TerC family 75 275 1.8E-54 T 17-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 FORC55_3182 f8d04cd7e56407130f8f7184edccc211 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 307 7.2E-104 T 17-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 SUPERFAMILY SSF54862 37 172 5.5E-31 T 17-10-2018 FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 25.921 T 17-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 Pfam PF14697 4Fe-4S dicluster domain 107 161 1.5E-17 T 17-10-2018 FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 PIRSF PIRSF005784 3 188 2.7E-86 T 17-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 Gene3D G3DSA:1.10.15.40 38 81 7.6E-8 T 17-10-2018 FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 1.3E-88 T 17-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 Pfam PF04060 Putative Fe-S cluster 44 75 8.6E-15 T 17-10-2018 IPR007202 4Fe-4S domain GO:0051536 FORC55_1762 8992020dfc7b4712a4a2d90b87a17887 195 Gene3D G3DSA:3.30.70.20 82 181 1.2E-22 T 17-10-2018 FORC55_2222 6ff712755769b71a03a41aa06eb7ecb6 244 Gene3D G3DSA:3.40.1350.60 81 238 1.5E-53 T 17-10-2018 FORC55_2222 6ff712755769b71a03a41aa06eb7ecb6 244 Gene3D G3DSA:2.40.50.580 1 80 2.3E-32 T 17-10-2018 FORC55_2222 6ff712755769b71a03a41aa06eb7ecb6 244 Pfam PF03749 Sugar fermentation stimulation protein 13 230 5.3E-76 T 17-10-2018 IPR005224 Sugar fermentation stimulation protein FORC55_2222 6ff712755769b71a03a41aa06eb7ecb6 244 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 239 56.842 T 17-10-2018 IPR005224 Sugar fermentation stimulation protein FORC55_2222 6ff712755769b71a03a41aa06eb7ecb6 244 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 229 1.7E-77 T 17-10-2018 IPR005224 Sugar fermentation stimulation protein FORC55_3199 e2438603e2122192059e447756d0e521 493 SUPERFAMILY SSF47384 280 351 6.28E-7 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_3199 e2438603e2122192059e447756d0e521 493 SUPERFAMILY SSF55874 359 488 1.29E-17 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3199 e2438603e2122192059e447756d0e521 493 SMART SM00388 285 352 2.0E-4 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3199 e2438603e2122192059e447756d0e521 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 486 6.8E-8 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3199 e2438603e2122192059e447756d0e521 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 341 1.1E-6 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3199 e2438603e2122192059e447756d0e521 493 SMART SM00387 390 488 2.7E-13 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3199 e2438603e2122192059e447756d0e521 493 Pfam PF11884 Domain of unknown function (DUF3404) 28 284 5.2E-108 T 17-10-2018 IPR021821 Protein of unknown function DUF3404 FORC55_3199 e2438603e2122192059e447756d0e521 493 Gene3D G3DSA:3.30.565.10 350 485 2.6E-17 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3199 e2438603e2122192059e447756d0e521 493 Gene3D G3DSA:1.10.287.130 292 349 2.6E-17 T 17-10-2018 FORC55_2906 29bb5f8e9a337fa6cd938ad85d251c13 338 SUPERFAMILY SSF46689 285 332 1.52E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2906 29bb5f8e9a337fa6cd938ad85d251c13 338 Pfam PF12833 Helix-turn-helix domain 255 332 1.5E-22 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_2906 29bb5f8e9a337fa6cd938ad85d251c13 338 SMART SM00342 249 332 8.8E-28 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_2906 29bb5f8e9a337fa6cd938ad85d251c13 338 Gene3D G3DSA:1.10.10.60 283 336 2.3E-13 T 17-10-2018 FORC55_2906 29bb5f8e9a337fa6cd938ad85d251c13 338 SUPERFAMILY SSF46689 233 283 2.69E-8 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2906 29bb5f8e9a337fa6cd938ad85d251c13 338 Gene3D G3DSA:1.10.10.60 224 282 3.3E-14 T 17-10-2018 FORC55_2906 29bb5f8e9a337fa6cd938ad85d251c13 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 286 328 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 FORC55_3158 3251eb0d4e5bf89e364da61582b7adff 379 SUPERFAMILY SSF56300 1 320 7.04E-55 T 17-10-2018 FORC55_3158 3251eb0d4e5bf89e364da61582b7adff 379 Gene3D G3DSA:3.60.21.10 1 265 5.4E-76 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_3158 3251eb0d4e5bf89e364da61582b7adff 379 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 5.7E-17 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_3158 3251eb0d4e5bf89e364da61582b7adff 379 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 351 2.8E-9 T 17-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain FORC55_3158 3251eb0d4e5bf89e364da61582b7adff 379 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 1.6E-55 T 17-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.30.559.10 1423 1622 2.1E-13 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF52777 1429 1581 1.22E-18 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:1.10.1200.10 1860 1943 9.0E-15 T 17-10-2018 IPR036736 ACP-like superfamily FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Pfam PF00668 Condensation domain 1428 1577 6.0E-8 T 17-10-2018 IPR001242 Condensation domain FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Pfam PF00668 Condensation domain 11 444 5.2E-31 T 17-10-2018 IPR001242 Condensation domain FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Pfam PF00668 Condensation domain 1960 2403 1.1E-45 T 17-10-2018 IPR001242 Condensation domain FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Pfam PF00668 Condensation domain 458 870 1.3E-11 T 17-10-2018 IPR001242 Condensation domain FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SMART SM00823 Phosphopantetheine attachment site 1874 1943 0.0092 T 17-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.30.559.10 4 184 9.2E-40 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.30.559.10 454 621 3.5E-23 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF52777 8 184 9.67E-20 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF52777 1961 2159 3.11E-32 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 926 1331 7.6E-104 T 17-10-2018 IPR010071 Amino acid adenylation domain FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF52777 2147 2400 2.22E-28 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Pfam PF13193 AMP-binding enzyme C-terminal domain 1316 1390 6.4E-7 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.30.300.30 1302 1411 1.7E-25 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Pfam PF00501 AMP-binding enzyme 910 1307 1.9E-79 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.40.50.12780 897 1299 4.4E-98 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.30.559.10 1962 2342 2.1E-64 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.30.559.30 2143 2389 2.1E-64 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.30.559.30 190 450 3.8E-53 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Gene3D G3DSA:3.30.559.30 637 876 2.7E-31 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF52777 642 869 6.23E-20 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1050 1061 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1898 1913 - T 17-10-2018 IPR006162 Phosphopantetheine attachment site FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF47336 1868 1937 2.36E-12 T 17-10-2018 IPR036736 ACP-like superfamily FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF52777 193 442 2.89E-31 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 Pfam PF00550 Phosphopantetheine attachment site 1877 1937 9.0E-8 T 17-10-2018 IPR009081 Phosphopantetheine binding ACP domain FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF52777 458 651 2.0E-12 T 17-10-2018 FORC55_0647 3dd4031478250872bba6c7b703b03373 2425 SUPERFAMILY SSF56801 891 1402 9.68E-123 T 17-10-2018 FORC55_0819 f071938980620bc523d5752c1da3ea6f 341 SUPERFAMILY SSF53659 4 336 7.4E-102 T 17-10-2018 FORC55_0819 f071938980620bc523d5752c1da3ea6f 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.4E-101 T 17-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 FORC55_0819 f071938980620bc523d5752c1da3ea6f 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 3.7E-106 T 17-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 FORC55_0819 f071938980620bc523d5752c1da3ea6f 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 136.177 T 17-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 FORC55_0819 f071938980620bc523d5752c1da3ea6f 341 Gene3D G3DSA:3.40.718.10 2 340 4.5E-119 T 17-10-2018 FORC55_0819 f071938980620bc523d5752c1da3ea6f 341 PIRSF PIRSF002465 2 339 6.3E-126 T 17-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 FORC55_2234 d0e2db2c703fcd95479194eb49846598 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 4.5E-6 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2234 d0e2db2c703fcd95479194eb49846598 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 4.5E-6 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2234 d0e2db2c703fcd95479194eb49846598 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 3.0E-12 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2234 d0e2db2c703fcd95479194eb49846598 203 SUPERFAMILY SSF48498 94 198 1.74E-8 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily FORC55_2234 d0e2db2c703fcd95479194eb49846598 203 Gene3D G3DSA:1.10.357.10 1 203 8.0E-90 T 17-10-2018 FORC55_2234 d0e2db2c703fcd95479194eb49846598 203 SUPERFAMILY SSF46689 9 88 7.98E-15 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 9.9E-76 T 17-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 PIRSF PIRSF000441 75 266 3.5E-57 T 17-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 PIRSF PIRSF000441 7 81 270.0 T 17-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 1.6E-9 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 Gene3D G3DSA:1.10.3130.10 1 142 1.9E-52 T 17-10-2018 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 4.6E-39 T 17-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 SMART SM00971 9 113 3.8E-63 T 17-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 Gene3D G3DSA:2.160.10.10 143 273 1.5E-38 T 17-10-2018 FORC55_0237 d4f85f9db4c86e20224b1180f05d33ee 273 SUPERFAMILY SSF51161 6 260 4.3E-65 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_0739 6db1a20f2988a4737e12d95970bd5306 671 Gene3D G3DSA:3.40.50.150 7 251 1.1E-106 T 17-10-2018 FORC55_0739 6db1a20f2988a4737e12d95970bd5306 671 SUPERFAMILY SSF51905 266 657 2.2E-27 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0739 6db1a20f2988a4737e12d95970bd5306 671 Gene3D G3DSA:3.50.50.60 265 661 1.1E-134 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0739 6db1a20f2988a4737e12d95970bd5306 671 Gene3D G3DSA:3.30.9.10 349 573 1.1E-134 T 17-10-2018 FORC55_0739 6db1a20f2988a4737e12d95970bd5306 671 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 1.7E-47 T 17-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 FORC55_0739 6db1a20f2988a4737e12d95970bd5306 671 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 659 28.004 T 17-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 FORC55_0739 6db1a20f2988a4737e12d95970bd5306 671 Pfam PF01266 FAD dependent oxidoreductase 266 634 6.6E-46 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 FORC55_0739 6db1a20f2988a4737e12d95970bd5306 671 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 664 3.0E-155 T 17-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 SUPERFAMILY SSF47384 404 464 4.71E-14 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Pfam PF01584 CheW-like domain 657 786 3.0E-22 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 SUPERFAMILY SSF50341 650 784 1.57E-28 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Gene3D G3DSA:2.30.30.40 651 780 9.2E-35 T 17-10-2018 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 SUPERFAMILY SSF47226 6 128 3.27E-30 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Gene3D G3DSA:1.10.287.560 403 463 2.1E-19 T 17-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Gene3D G3DSA:2.40.50.180 674 739 9.2E-35 T 17-10-2018 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 SMART SM00387 508 651 3.3E-21 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 5.6E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 648 5.6E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 605 5.6E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 629 5.6E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 SMART SM00260 643 784 1.1E-32 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Gene3D G3DSA:1.20.120.160 2 145 1.2E-36 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 511 650 2.9E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 SMART SM01231 403 463 7.6E-18 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 403 463 1.1E-12 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Gene3D G3DSA:3.30.565.10 464 650 9.2E-56 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 SUPERFAMILY SSF55874 466 649 1.7E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 Pfam PF01627 Hpt domain 8 100 1.8E-17 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_0782 b03fed64983b0d2700cfee867a4d5473 793 SMART SM00073 6 103 1.1E-17 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_0461 463456b3c391031277edcd2135d0c745 886 Gene3D G3DSA:3.40.50.970 55 471 2.6E-133 T 17-10-2018 FORC55_0461 463456b3c391031277edcd2135d0c745 886 SUPERFAMILY SSF52518 475 700 3.41E-96 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0461 463456b3c391031277edcd2135d0c745 886 Gene3D G3DSA:3.40.50.970 472 705 3.3E-109 T 17-10-2018 FORC55_0461 463456b3c391031277edcd2135d0c745 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 17-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 FORC55_0461 463456b3c391031277edcd2135d0c745 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 294 4.3E-9 T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_0461 463456b3c391031277edcd2135d0c745 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.4E-4 T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_0461 463456b3c391031277edcd2135d0c745 886 PIRSF PIRSF000156 1 886 0.0 T 17-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 FORC55_0461 463456b3c391031277edcd2135d0c745 886 SUPERFAMILY SSF52518 56 469 3.54E-140 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0461 463456b3c391031277edcd2135d0c745 886 Gene3D G3DSA:3.40.50.920 706 886 2.1E-71 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 FORC55_0461 463456b3c391031277edcd2135d0c745 886 SUPERFAMILY SSF52922 701 885 1.0E-58 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 FORC55_0966 f4854383de8887c51927d890d2d81376 246 Gene3D G3DSA:3.20.20.70 2 246 4.4E-106 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0966 f4854383de8887c51927d890d2d81376 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.2E-109 T 17-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 FORC55_0966 f4854383de8887c51927d890d2d81376 246 Pfam PF13353 4Fe-4S single cluster domain 16 133 5.0E-20 T 17-10-2018 FORC55_0966 f4854383de8887c51927d890d2d81376 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 17-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 FORC55_0966 f4854383de8887c51927d890d2d81376 246 Pfam PF04055 Radical SAM superfamily 24 178 6.4E-32 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_0966 f4854383de8887c51927d890d2d81376 246 SUPERFAMILY SSF102114 23 220 1.31E-30 T 17-10-2018 FORC55_0966 f4854383de8887c51927d890d2d81376 246 PIRSF PIRSF000371 44 245 3.5E-47 T 17-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 FORC55_0966 f4854383de8887c51927d890d2d81376 246 PIRSF PIRSF000371 1 48 4.0E-11 T 17-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 99 412 6.1E-26 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 PRINTS PR00419 Adrenodoxin reductase family signature 122 135 1.3E-23 T 17-10-2018 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 PRINTS PR00419 Adrenodoxin reductase family signature 99 121 1.3E-23 T 17-10-2018 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 PRINTS PR00419 Adrenodoxin reductase family signature 164 174 1.3E-23 T 17-10-2018 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 PRINTS PR00419 Adrenodoxin reductase family signature 239 253 1.3E-23 T 17-10-2018 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1 431 5.8E-188 T 17-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 SUPERFAMILY SSF51971 343 432 2.94E-8 T 17-10-2018 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 2 84 5.6E-19 T 17-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 SUPERFAMILY SSF51971 96 360 7.65E-66 T 17-10-2018 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 Gene3D G3DSA:3.50.50.60 198 359 4.5E-37 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 SUPERFAMILY SSF46548 1 108 6.28E-28 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 Gene3D G3DSA:3.50.50.60 98 192 2.0E-11 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 Gene3D G3DSA:1.10.1060.10 1 97 1.2E-19 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_0499 cf62e7801bb7e391048f541da1bc1d09 442 Gene3D G3DSA:3.50.50.60 365 427 9.0E-6 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3166 64ae2832eaf6db7ccb6d26a2e174d90d 320 Pfam PF03595 Voltage-dependent anion channel 11 303 1.9E-22 T 17-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 FORC55_3166 64ae2832eaf6db7ccb6d26a2e174d90d 320 Gene3D G3DSA:1.50.10.150 5 308 6.0E-32 T 17-10-2018 IPR038665 Voltage-dependent anion channel superfamily FORC55_2646 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF47917 352 466 2.51E-50 T 17-10-2018 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 17-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:2.40.10.170 2 75 7.7E-29 T 17-10-2018 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 1.1E-247 T 17-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 1.5E-61 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 SMART SM00382 142 334 2.3E-4 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2646 77aa030dbc164bf7358215078a97c897 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.022 T 17-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:1.10.1140.10 352 467 3.4E-53 T 17-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF50615 1 75 1.65E-24 T 17-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF52540 77 355 5.14E-87 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2646 77aa030dbc164bf7358215078a97c897 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 2.3E-19 T 17-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2646 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:3.40.50.300 76 351 2.7E-111 T 17-10-2018 FORC55_2105 96d57d0abf27949400b859456f67a1a6 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 165 6.2E-45 T 17-10-2018 IPR001405 Uncharacterised protein family UPF0758 FORC55_2105 96d57d0abf27949400b859456f67a1a6 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 17-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site FORC55_2105 96d57d0abf27949400b859456f67a1a6 165 Pfam PF04002 RadC-like JAB domain 44 163 2.2E-44 T 17-10-2018 IPR025657 RadC-like JAB domain FORC55_2105 96d57d0abf27949400b859456f67a1a6 165 SUPERFAMILY SSF102712 57 132 1.44E-6 T 17-10-2018 FORC55_2105 96d57d0abf27949400b859456f67a1a6 165 Gene3D G3DSA:3.40.140.10 41 165 2.7E-45 T 17-10-2018 FORC55_0249 13d88c2d49d476fd7849499d451b42e7 797 Gene3D G3DSA:1.10.3810.10 20 214 4.2E-78 T 17-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0249 13d88c2d49d476fd7849499d451b42e7 797 Gene3D G3DSA:3.40.710.10 215 337 2.1E-9 T 17-10-2018 FORC55_0249 13d88c2d49d476fd7849499d451b42e7 797 Pfam PF17092 Penicillin-binding protein OB-like domain 289 403 2.0E-30 T 17-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0249 13d88c2d49d476fd7849499d451b42e7 797 SUPERFAMILY SSF53955 15 228 7.31E-78 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_0249 13d88c2d49d476fd7849499d451b42e7 797 Pfam PF00912 Transglycosylase 27 201 2.5E-63 T 17-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0249 13d88c2d49d476fd7849499d451b42e7 797 SUPERFAMILY SSF56601 183 783 4.36E-116 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_0249 13d88c2d49d476fd7849499d451b42e7 797 Pfam PF00905 Penicillin binding protein transpeptidase domain 406 678 4.4E-27 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 FORC55_0249 13d88c2d49d476fd7849499d451b42e7 797 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 37 731 2.5E-169 T 17-10-2018 FORC55_1295 f863c91f34fca0d767d99f4f236c6150 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 62.992 T 17-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 FORC55_1295 f863c91f34fca0d767d99f4f236c6150 302 Gene3D G3DSA:3.30.420.40 4 297 6.5E-100 T 17-10-2018 FORC55_1295 f863c91f34fca0d767d99f4f236c6150 302 Pfam PF00480 ROK family 2 300 8.6E-73 T 17-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_1295 f863c91f34fca0d767d99f4f236c6150 302 SUPERFAMILY SSF53067 1 299 2.59E-56 T 17-10-2018 FORC55_1295 f863c91f34fca0d767d99f4f236c6150 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 17-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_1295 f863c91f34fca0d767d99f4f236c6150 302 Gene3D G3DSA:3.30.420.40 119 290 6.5E-100 T 17-10-2018 FORC55_2502 d8f36225c4d76ed7a13ee538e6cdfe98 519 Gene3D G3DSA:1.10.10.10 5 105 5.6E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2502 d8f36225c4d76ed7a13ee538e6cdfe98 519 SMART SM00862 24 100 1.2E-13 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_2502 d8f36225c4d76ed7a13ee538e6cdfe98 519 SUPERFAMILY SSF46894 6 103 3.68E-17 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_2502 d8f36225c4d76ed7a13ee538e6cdfe98 519 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 3.9E-16 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_2502 d8f36225c4d76ed7a13ee538e6cdfe98 519 Gene3D G3DSA:1.25.40.10 350 511 2.5E-21 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 Pfam PF00571 CBS domain 140 195 1.6E-4 T 17-10-2018 IPR000644 CBS domain FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 Pfam PF00571 CBS domain 204 257 2.1E-4 T 17-10-2018 IPR000644 CBS domain FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 SMART SM00924 36 139 3.6E-36 T 17-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 Pfam PF01769 Divalent cation transporter 323 444 2.7E-23 T 17-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 SUPERFAMILY SSF161093 280 451 3.66E-44 T 17-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 Gene3D G3DSA:1.10.357.20 277 452 1.4E-45 T 17-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 Pfam PF03448 MgtE intracellular N domain 36 137 2.6E-26 T 17-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 Gene3D G3DSA:3.10.580.10 135 262 3.6E-37 T 17-10-2018 FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 SUPERFAMILY SSF54631 138 278 1.26E-28 T 17-10-2018 FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 SUPERFAMILY SSF158791 13 136 2.35E-30 T 17-10-2018 FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 Gene3D G3DSA:1.25.60.10 9 134 7.9E-20 T 17-10-2018 IPR038076 MgtE, N-terminal domain superfamily FORC55_0347 6a61a734d18fe9c9f2ceede96913afcc 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 12 453 1.3E-87 T 17-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 FORC55_1271 d9d4773bf66a9ab3295ae5f31958172b 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 1.3E-17 T 17-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 FORC55_1271 d9d4773bf66a9ab3295ae5f31958172b 120 SUPERFAMILY SSF55298 1 116 1.07E-26 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 FORC55_1271 d9d4773bf66a9ab3295ae5f31958172b 120 Gene3D G3DSA:3.30.1330.40 1 119 3.5E-30 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 FORC55_3054 19b8b6a2b2429e807177ec169e9e77b1 113 Pfam PF13817 IS66 C-terminal element 73 109 1.1E-9 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_3054 19b8b6a2b2429e807177ec169e9e77b1 113 Pfam PF03050 Transposase IS66 family 3 67 6.5E-25 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 SUPERFAMILY SSF52833 2 241 2.89E-50 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 Gene3D G3DSA:3.40.30.10 4 165 1.0E-63 T 17-10-2018 FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 Pfam PF08534 Redoxin 5 160 6.6E-33 T 17-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 1.3E-39 T 17-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 Gene3D G3DSA:3.40.30.10 171 241 1.1E-23 T 17-10-2018 FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 PRINTS PR00160 Glutaredoxin signature 228 241 2.7E-15 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 PRINTS PR00160 Glutaredoxin signature 214 227 2.7E-15 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 PRINTS PR00160 Glutaredoxin signature 173 191 2.7E-15 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 Pfam PF00462 Glutaredoxin 173 231 1.1E-18 T 17-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 FORC55_0247 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 17-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 SMART SM00962 197 398 5.8E-123 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 Pfam PF00448 SRP54-type protein, GTPase domain 198 397 1.2E-77 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 371 384 - T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 SMART SM00963 102 182 4.2E-26 T 17-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 Gene3D G3DSA:1.20.120.140 99 396 5.6E-117 T 17-10-2018 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 Gene3D G3DSA:3.40.50.300 197 386 5.6E-117 T 17-10-2018 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 Pfam PF02881 SRP54-type protein, helical bundle domain 117 178 3.9E-13 T 17-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 125 398 64.136 T 17-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 125 397 2.4E-115 T 17-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 SUPERFAMILY SSF52540 193 398 4.81E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 SUPERFAMILY SSF47364 97 176 1.83E-21 T 17-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 FORC55_0121 7cc764544d458b63f7ee7e4831d8e57a 401 SMART SM00382 196 376 1.3E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 Gene3D G3DSA:3.90.226.10 2 305 3.1E-95 T 17-10-2018 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 17-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 SUPERFAMILY SSF48179 615 707 1.7E-26 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 214 1.8E-37 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 SUPERFAMILY SSF48179 497 606 3.49E-28 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 Gene3D G3DSA:1.10.1040.50 500 701 5.6E-72 T 17-10-2018 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 495 8.8E-54 T 17-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 519 - T 17-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 707 51.975 T 17-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 SUPERFAMILY SSF52096 3 305 1.66E-67 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 Gene3D G3DSA:3.40.50.720 306 499 6.9E-58 T 17-10-2018 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 SUPERFAMILY SSF51735 314 495 1.26E-45 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 590 6.3E-25 T 17-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 694 8.0E-6 T 17-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_1734 2648aee668ccdfcaccf04c61c462eb99 708 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 707 0.0 T 17-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 SUPERFAMILY SSF58104 231 511 9.94E-58 T 17-10-2018 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 SMART SM00091 9 75 0.001 T 17-10-2018 IPR000014 PAS domain FORC55_0065 0e3d48d771221ea8028f166755820d42 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 406 1.4E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 300 1.4E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 348 375 1.4E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 SUPERFAMILY SSF55785 22 116 4.36E-27 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0065 0e3d48d771221ea8028f166755820d42 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 125 9.5E-17 T 17-10-2018 IPR000014 PAS domain FORC55_0065 0e3d48d771221ea8028f166755820d42 512 SMART SM00283 250 511 9.2E-39 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 SMART SM00086 81 122 0.0085 T 17-10-2018 IPR001610 PAC motif FORC55_0065 0e3d48d771221ea8028f166755820d42 512 Gene3D G3DSA:3.30.450.20 14 152 1.5E-27 T 17-10-2018 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 307 477 3.8E-32 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 Pfam PF08447 PAS fold 32 115 3.2E-19 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 FORC55_0065 0e3d48d771221ea8028f166755820d42 512 Gene3D G3DSA:1.10.287.950 214 512 8.7E-52 T 17-10-2018 FORC55_2738 8702648b748907cc8f7288ff76f43e82 265 SMART SM00422 8 77 6.8E-18 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2738 8702648b748907cc8f7288ff76f43e82 265 Gene3D G3DSA:1.10.1660.10 2 75 1.2E-24 T 17-10-2018 FORC55_2738 8702648b748907cc8f7288ff76f43e82 265 SUPERFAMILY SSF46955 8 101 4.03E-18 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily FORC55_2738 8702648b748907cc8f7288ff76f43e82 265 Pfam PF13411 MerR HTH family regulatory protein 8 76 2.0E-18 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_0259 c7b744a9cee3a3e8a42c1e7c3059953c 224 Gene3D G3DSA:3.20.20.70 5 222 2.0E-86 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0259 c7b744a9cee3a3e8a42c1e7c3059953c 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.7E-91 T 17-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 FORC55_0259 c7b744a9cee3a3e8a42c1e7c3059953c 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 6.7E-100 T 17-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 FORC55_0259 c7b744a9cee3a3e8a42c1e7c3059953c 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 17-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 FORC55_0259 c7b744a9cee3a3e8a42c1e7c3059953c 224 PIRSF PIRSF001461 1 224 1.4E-106 T 17-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 FORC55_0259 c7b744a9cee3a3e8a42c1e7c3059953c 224 SUPERFAMILY SSF51366 4 218 1.78E-76 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_0259 c7b744a9cee3a3e8a42c1e7c3059953c 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 17-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 FORC55_0605 68044e63e0c644a2a6ea2b8ee532296e 250 SUPERFAMILY SSF64005 10 234 6.15E-88 T 17-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 FORC55_0605 68044e63e0c644a2a6ea2b8ee532296e 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.45 T 17-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 FORC55_0605 68044e63e0c644a2a6ea2b8ee532296e 250 Gene3D G3DSA:3.40.1180.10 1 239 1.9E-95 T 17-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 FORC55_0605 68044e63e0c644a2a6ea2b8ee532296e 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.1E-81 T 17-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 FORC55_0605 68044e63e0c644a2a6ea2b8ee532296e 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 17-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 FORC55_0605 68044e63e0c644a2a6ea2b8ee532296e 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 1.4E-95 T 17-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 Pfam PF00376 MerR family regulatory protein 4 40 3.3E-13 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 4.7E-76 T 17-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 SMART SM00422 3 71 8.3E-26 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 Gene3D G3DSA:1.10.1660.10 1 126 3.0E-33 T 17-10-2018 FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 SUPERFAMILY SSF46955 3 125 1.5E-29 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 Pfam PF09278 MerR, DNA binding 45 110 4.2E-17 T 17-10-2018 IPR015358 Transcription regulator MerR, DNA binding FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 4.1E-14 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.1E-14 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2762 3e1180f2762b24b7cd7693dbd6209e87 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 4.1E-14 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_1754 29226b5c38fe03982f5d566303c75272 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.2E-70 T 17-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1754 29226b5c38fe03982f5d566303c75272 159 Pfam PF01967 MoaC family 15 150 9.9E-56 T 17-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1754 29226b5c38fe03982f5d566303c75272 159 Gene3D G3DSA:3.30.70.640 1 159 1.0E-70 T 17-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1754 29226b5c38fe03982f5d566303c75272 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.99 T 17-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1754 29226b5c38fe03982f5d566303c75272 159 SUPERFAMILY SSF55040 11 155 1.31E-61 T 17-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1984 b01103f0bafefe7d10c4464210550b8f 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.814 T 17-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 FORC55_1984 b01103f0bafefe7d10c4464210550b8f 374 Gene3D G3DSA:3.20.20.20 1 261 9.2E-105 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_1984 b01103f0bafefe7d10c4464210550b8f 374 SUPERFAMILY SSF51717 15 208 3.53E-10 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_1984 b01103f0bafefe7d10c4464210550b8f 374 Pfam PF04551 GcpE protein 14 354 3.5E-131 T 17-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 FORC55_1984 b01103f0bafefe7d10c4464210550b8f 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 8.9E-125 T 17-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 FORC55_1984 b01103f0bafefe7d10c4464210550b8f 374 PIRSF PIRSF004640 1 364 5.6E-146 T 17-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 FORC55_1984 b01103f0bafefe7d10c4464210550b8f 374 SUPERFAMILY SSF56014 265 354 2.62E-11 T 17-10-2018 FORC55_1984 b01103f0bafefe7d10c4464210550b8f 374 Gene3D G3DSA:3.30.413.10 262 361 4.7E-24 T 17-10-2018 FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 350 3.9E-63 T 17-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 PIRSF PIRSF000808 2 345 8.0E-121 T 17-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 SUPERFAMILY SSF54197 6 179 8.28E-71 T 17-10-2018 IPR036265 HIT-like superfamily FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 Gene3D G3DSA:3.30.428.10 46 177 4.4E-54 T 17-10-2018 IPR036265 HIT-like superfamily FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 Gene3D G3DSA:3.30.428.10 178 354 3.9E-70 T 17-10-2018 IPR036265 HIT-like superfamily FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 7.0E-65 T 17-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 17-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 350 1.3E-182 T 17-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 FORC55_1240 29f3f31bcbe150c2ee0ae85d4815494d 354 SUPERFAMILY SSF54197 181 350 2.72E-53 T 17-10-2018 IPR036265 HIT-like superfamily FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 SUPERFAMILY SSF81301 23 180 4.8E-40 T 17-10-2018 FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 Pfam PF01743 Poly A polymerase head domain 52 183 1.3E-38 T 17-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 SUPERFAMILY SSF81891 181 393 7.98E-48 T 17-10-2018 FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 Gene3D G3DSA:1.10.3090.10 181 431 4.0E-90 T 17-10-2018 FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 Pfam PF12626 Polymerase A arginine-rich C-terminus 329 446 7.8E-38 T 17-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 7 448 37.544 T 17-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 452 8.3E-159 T 17-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 Gene3D G3DSA:3.30.460.10 18 179 5.4E-63 T 17-10-2018 FORC55_2225 ba0da8f0c34bf01260f65bd0b1f4c2ef 457 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 271 3.8E-21 T 17-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 FORC55_0101 01f9dab16528320a7d82b42ad06c2c93 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 9.7E-42 T 17-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_0101 01f9dab16528320a7d82b42ad06c2c93 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 26.763 T 17-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_0101 01f9dab16528320a7d82b42ad06c2c93 104 SMART SM01219 1 104 6.7E-54 T 17-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_0101 01f9dab16528320a7d82b42ad06c2c93 104 SUPERFAMILY SSF55387 1 103 8.55E-39 T 17-10-2018 FORC55_0101 01f9dab16528320a7d82b42ad06c2c93 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 17-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_0101 01f9dab16528320a7d82b42ad06c2c93 104 Pfam PF01491 Frataxin-like domain 1 100 2.7E-29 T 17-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_0101 01f9dab16528320a7d82b42ad06c2c93 104 Gene3D G3DSA:3.30.920.10 1 104 1.6E-38 T 17-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_0385 a3849e3047f26a2f54ade148e1ded3ee 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.3E-97 T 17-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 FORC55_0385 a3849e3047f26a2f54ade148e1ded3ee 200 Gene3D G3DSA:3.20.19.10 1 180 3.6E-78 T 17-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 FORC55_0385 a3849e3047f26a2f54ade148e1ded3ee 200 SUPERFAMILY SSF52016 1 196 9.42E-62 T 17-10-2018 FORC55_0385 a3849e3047f26a2f54ade148e1ded3ee 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.046 T 17-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 FORC55_0385 a3849e3047f26a2f54ade148e1ded3ee 200 Pfam PF00694 Aconitase C-terminal domain 1 125 5.3E-39 T 17-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 FORC55_1882 d2ae96c907129bed46029f767d00ef13 103 PIRSF PIRSF006257 1 103 2.2E-39 T 17-10-2018 IPR007384 Protein of unknown function UCP006257 FORC55_1882 d2ae96c907129bed46029f767d00ef13 103 Pfam PF04287 tRNA pseudouridine synthase C 8 100 5.2E-31 T 17-10-2018 IPR023376 YqcC-like domain FORC55_1882 d2ae96c907129bed46029f767d00ef13 103 SUPERFAMILY SSF158452 3 102 4.45E-32 T 17-10-2018 IPR036814 YqcC-like superfamily FORC55_1882 d2ae96c907129bed46029f767d00ef13 103 Gene3D G3DSA:1.20.1440.40 1 103 6.2E-30 T 17-10-2018 IPR036814 YqcC-like superfamily FORC55_1923 506159541d0c89716f58f144ef4931c4 329 Pfam PF01867 CRISPR associated protein Cas1 24 293 1.5E-13 T 17-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 FORC55_1923 506159541d0c89716f58f144ef4931c4 329 Gene3D G3DSA:1.20.120.920 110 323 1.0E-69 T 17-10-2018 FORC55_1923 506159541d0c89716f58f144ef4931c4 329 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 12 315 6.1E-144 T 17-10-2018 IPR019857 CRISPR-associated protein Cas1, YPEST subtype GO:0004520|GO:0043571|GO:0046872 FORC55_1923 506159541d0c89716f58f144ef4931c4 329 Gene3D G3DSA:3.100.10.20 11 109 3.1E-47 T 17-10-2018 FORC55_1923 506159541d0c89716f58f144ef4931c4 329 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 293 7.3E-58 T 17-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 FORC55_1923 506159541d0c89716f58f144ef4931c4 329 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 16 328 16.013 T 17-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 FORC55_1932 7df1893e14ef641d632c8b84dd836976 340 Pfam PF02156 Glycosyl hydrolase family 26 200 311 2.5E-5 T 17-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 FORC55_1684 9a6b2f7054c790ab5826b1be11c0a5a8 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 7.5E-60 T 17-10-2018 IPR007334 Uncharacterised protein family UPF0208 FORC55_1684 9a6b2f7054c790ab5826b1be11c0a5a8 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.892 T 17-10-2018 IPR007334 Uncharacterised protein family UPF0208 FORC55_1788 39cceea68fcdf8a1e8b6136089725d6d 493 Gene3D G3DSA:1.20.1250.20 3 481 1.7E-108 T 17-10-2018 FORC55_1788 39cceea68fcdf8a1e8b6136089725d6d 493 SUPERFAMILY SSF103473 4 201 2.62E-19 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_1788 39cceea68fcdf8a1e8b6136089725d6d 493 Pfam PF00854 POT family 79 442 3.2E-80 T 17-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 FORC55_1788 39cceea68fcdf8a1e8b6136089725d6d 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 67 91 - T 17-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 FORC55_1788 39cceea68fcdf8a1e8b6136089725d6d 493 SUPERFAMILY SSF103473 214 480 4.05E-9 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_1788 39cceea68fcdf8a1e8b6136089725d6d 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 480 2.4E-127 T 17-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 FORC55_1788 39cceea68fcdf8a1e8b6136089725d6d 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 17-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 Gene3D G3DSA:3.30.70.260 247 344 2.6E-40 T 17-10-2018 FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 SUPERFAMILY SSF55021 248 343 8.58E-25 T 17-10-2018 FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 SMART SM00382 30 235 1.1E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 Pfam PF09383 NIL domain 268 339 4.0E-20 T 17-10-2018 IPR018449 NIL domain FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 Pfam PF00005 ABC transporter 21 169 2.1E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 Gene3D G3DSA:3.40.50.300 1 246 3.2E-73 T 17-10-2018 FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 SUPERFAMILY SSF52540 1 239 1.82E-82 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 SMART SM00930 265 340 1.2E-27 T 17-10-2018 IPR018449 NIL domain FORC55_1863 8d9befb77bec8e33e2ef0fb7256c0426 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 2.9E-209 T 17-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 FORC55_2941 b3702741ddcbecc590ccc07d4ea3606d 137 Gene3D G3DSA:1.10.287.1050 1 85 3.7E-27 T 17-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 FORC55_2941 b3702741ddcbecc590ccc07d4ea3606d 137 SMART SM00528 90 137 8.1E-20 T 17-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 FORC55_2941 b3702741ddcbecc590ccc07d4ea3606d 137 SUPERFAMILY SSF81273 2 58 3.34E-15 T 17-10-2018 FORC55_2941 b3702741ddcbecc590ccc07d4ea3606d 137 PIRSF PIRSF002096 1 137 2.4E-50 T 17-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 FORC55_2941 b3702741ddcbecc590ccc07d4ea3606d 137 Gene3D G3DSA:4.10.430.10 94 137 3.6E-23 T 17-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 FORC55_2941 b3702741ddcbecc590ccc07d4ea3606d 137 Pfam PF00816 H-NS histone family 39 130 1.0E-19 T 17-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 FORC55_2941 b3702741ddcbecc590ccc07d4ea3606d 137 SUPERFAMILY SSF81273 95 137 1.65E-11 T 17-10-2018 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 SMART SM00842 10 196 1.2E-96 T 17-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.420.40 13 379 2.3E-111 T 17-10-2018 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.420.40 197 359 2.3E-111 T 17-10-2018 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.1490.110 87 169 2.3E-111 T 17-10-2018 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.102 T 17-10-2018 IPR020823 Cell division protein FtsA FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 4.1E-151 T 17-10-2018 IPR020823 Cell division protein FtsA FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-28 T 17-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 SUPERFAMILY SSF53067 198 384 1.15E-43 T 17-10-2018 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 PIRSF PIRSF003101 1 420 9.5E-146 T 17-10-2018 IPR020823 Cell division protein FtsA FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.90.640.10 235 300 2.3E-111 T 17-10-2018 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 Pfam PF14450 Cell division protein FtsA 207 381 9.8E-24 T 17-10-2018 FORC55_0475 2cd2ef44fc077dd758b8641f74693fd7 420 SUPERFAMILY SSF53067 8 221 4.4E-60 T 17-10-2018 FORC55_0796 0b74889cca5296f1510efb8cecf6d085 404 SUPERFAMILY SSF48452 161 265 4.93E-14 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0796 0b74889cca5296f1510efb8cecf6d085 404 Pfam PF14559 Tetratricopeptide repeat 177 244 2.4E-7 T 17-10-2018 FORC55_0796 0b74889cca5296f1510efb8cecf6d085 404 Gene3D G3DSA:1.25.40.10 153 294 4.7E-16 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0796 0b74889cca5296f1510efb8cecf6d085 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 117 6.0E-31 T 17-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI FORC55_1021 e2ee313506b415f046e18ddccf667b65 483 SUPERFAMILY SSF53720 6 480 7.46E-165 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_1021 e2ee313506b415f046e18ddccf667b65 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 FORC55_1021 e2ee313506b415f046e18ddccf667b65 483 Gene3D G3DSA:3.40.309.10 261 449 1.7E-174 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 FORC55_1021 e2ee313506b415f046e18ddccf667b65 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 475 1.4E-203 T 17-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 FORC55_1021 e2ee313506b415f046e18ddccf667b65 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 FORC55_1021 e2ee313506b415f046e18ddccf667b65 483 Gene3D G3DSA:3.40.605.10 25 472 1.7E-174 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_1021 e2ee313506b415f046e18ddccf667b65 483 Pfam PF00171 Aldehyde dehydrogenase family 24 476 2.9E-164 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 FORC55_0920 dca8f177df1310f3aa4d2800867d4446 609 SUPERFAMILY SSF53850 41 559 9.05E-91 T 17-10-2018 FORC55_0920 dca8f177df1310f3aa4d2800867d4446 609 PIRSF PIRSF002741 1 564 4.0E-66 T 17-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 FORC55_0920 dca8f177df1310f3aa4d2800867d4446 609 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 485 2.3E-55 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_0920 dca8f177df1310f3aa4d2800867d4446 609 Gene3D G3DSA:3.10.105.10 320 540 1.8E-41 T 17-10-2018 FORC55_0920 dca8f177df1310f3aa4d2800867d4446 609 Gene3D G3DSA:3.40.190.10 18 319 1.9E-41 T 17-10-2018 FORC55_3415 c57e1c0aba4156e07bea2caeb546468c 549 SUPERFAMILY SSF52540 229 409 2.58E-5 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3415 c57e1c0aba4156e07bea2caeb546468c 549 Pfam PF09818 Predicted ATPase of the ABC class 2 436 6.3E-183 T 17-10-2018 IPR019195 ABC transporter, ATPase, putative FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 SUPERFAMILY SSF63418 13 108 8.76E-23 T 17-10-2018 IPR035911 MurE/MurF, N-terminal FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 SUPERFAMILY SSF53244 340 491 1.33E-47 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 Gene3D G3DSA:3.40.1190.10 110 342 1.7E-79 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 424 2.4E-24 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 SUPERFAMILY SSF53623 111 337 1.7E-72 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 Pfam PF01225 Mur ligase family, catalytic domain 27 105 4.5E-14 T 17-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 Gene3D G3DSA:3.90.190.20 345 494 2.1E-54 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 Gene3D G3DSA:3.40.1390.10 4 108 1.3E-29 T 17-10-2018 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 33.529 T 17-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 491 2.5E-181 T 17-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 FORC55_0467 7ffe53ae80805f03ac65b8acda67a0e3 495 Pfam PF08245 Mur ligase middle domain 117 318 2.2E-50 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 FORC55_0743 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 SUPERFAMILY SSF46785 5 134 1.43E-43 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0743 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 Gene3D G3DSA:3.30.1490.190 85 142 4.7E-23 T 17-10-2018 FORC55_0743 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 Gene3D G3DSA:1.10.10.10 1 84 3.6E-35 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0743 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 Pfam PF01475 Ferric uptake regulator family 11 130 7.6E-47 T 17-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 TIGRFAM TIGR01391 dnaG: DNA primase 5 423 1.4E-144 T 17-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 4.0E-42 T 17-10-2018 IPR013264 DNA primase, catalytic core, N-terminal FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 SMART SM00766 460 585 3.3E-51 T 17-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Gene3D G3DSA:3.40.1360.10 248 373 1.0E-38 T 17-10-2018 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Pfam PF13662 Toprim domain 267 332 5.2E-15 T 17-10-2018 IPR006171 TOPRIM domain FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 SUPERFAMILY SSF117023 457 587 2.35E-43 T 17-10-2018 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Gene3D G3DSA:3.90.980.10 122 247 1.6E-45 T 17-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Gene3D G3DSA:3.90.580.10 1 102 8.5E-42 T 17-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Hamap MF_00974 DNA primase [dnaG]. 4 586 28.78 T 17-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 SUPERFAMILY SSF57783 4 101 2.04E-38 T 17-10-2018 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 SMART SM00400 36 90 3.5E-37 T 17-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Pfam PF08278 DNA primase DnaG DnaB-binding 461 584 5.2E-34 T 17-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 SMART SM00493 266 337 2.1E-18 T 17-10-2018 IPR006171 TOPRIM domain FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Gene3D G3DSA:1.10.860.10 448 591 3.9E-61 T 17-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 Pfam PF01807 CHC2 zinc finger 6 101 2.6E-42 T 17-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 PIRSF PIRSF002811 2 590 4.3E-144 T 17-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 FORC55_2297 922c6e8168d8092fccdc6a64695243ea 591 SUPERFAMILY SSF56731 122 430 2.22E-103 T 17-10-2018 FORC55_3451 34f59ae7481bcca7f96a54cca6cbc1df 298 Pfam PF01545 Cation efflux family 13 214 1.6E-38 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 FORC55_3451 34f59ae7481bcca7f96a54cca6cbc1df 298 Gene3D G3DSA:1.20.1510.10 9 214 2.3E-22 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily FORC55_3451 34f59ae7481bcca7f96a54cca6cbc1df 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 273 1.2E-26 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 FORC55_3451 34f59ae7481bcca7f96a54cca6cbc1df 298 SUPERFAMILY SSF161111 9 213 4.05E-33 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily FORC55_1939 830a82f344ceda5270403fc559e5f34f 716 SMART SM00487 1 170 4.1E-6 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_1939 830a82f344ceda5270403fc559e5f34f 716 Pfam PF04851 Type III restriction enzyme, res subunit 8 143 5.0E-32 T 17-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 FORC55_1939 830a82f344ceda5270403fc559e5f34f 716 Pfam PF11907 Domain of unknown function (DUF3427) 442 709 1.9E-34 T 17-10-2018 IPR021835 Protein of unknown function DUF3427 FORC55_1939 830a82f344ceda5270403fc559e5f34f 716 Pfam PF00271 Helicase conserved C-terminal domain 224 320 1.4E-10 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_1939 830a82f344ceda5270403fc559e5f34f 716 SMART SM00490 242 322 8.1E-9 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_1939 830a82f344ceda5270403fc559e5f34f 716 SUPERFAMILY SSF52540 43 338 9.88E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1939 830a82f344ceda5270403fc559e5f34f 716 Gene3D G3DSA:3.40.50.300 1 158 3.6E-38 T 17-10-2018 FORC55_1939 830a82f344ceda5270403fc559e5f34f 716 Gene3D G3DSA:3.40.50.300 162 349 2.7E-35 T 17-10-2018 FORC55_1657 4b0fb69a1369617efd5873ed2503a275 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 8.0E-107 T 17-10-2018 FORC55_1657 4b0fb69a1369617efd5873ed2503a275 205 SUPERFAMILY SSF101322 2 204 2.88E-79 T 17-10-2018 IPR035932 HflD-like superfamily FORC55_1657 4b0fb69a1369617efd5873ed2503a275 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.461 T 17-10-2018 IPR007451 High frequency lysogenization protein HflD FORC55_1657 4b0fb69a1369617efd5873ed2503a275 205 Gene3D G3DSA:1.10.3890.10 1 205 1.4E-77 T 17-10-2018 IPR035932 HflD-like superfamily FORC55_1657 4b0fb69a1369617efd5873ed2503a275 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 8.1E-76 T 17-10-2018 IPR007451 High frequency lysogenization protein HflD FORC55_1915 816f06c70461a3de0b197e440853a2c6 161 Pfam PF01668 SmpB protein 15 157 8.2E-57 T 17-10-2018 IPR000037 SsrA-binding protein GO:0003723 FORC55_1915 816f06c70461a3de0b197e440853a2c6 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 3.0E-61 T 17-10-2018 IPR000037 SsrA-binding protein GO:0003723 FORC55_1915 816f06c70461a3de0b197e440853a2c6 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.8E-53 T 17-10-2018 IPR000037 SsrA-binding protein GO:0003723 FORC55_1915 816f06c70461a3de0b197e440853a2c6 161 Gene3D G3DSA:2.40.280.10 7 136 7.0E-45 T 17-10-2018 IPR023620 Small protein B FORC55_1915 816f06c70461a3de0b197e440853a2c6 161 SUPERFAMILY SSF74982 9 139 6.8E-49 T 17-10-2018 IPR023620 Small protein B FORC55_1915 816f06c70461a3de0b197e440853a2c6 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 71.106 T 17-10-2018 IPR000037 SsrA-binding protein GO:0003723 FORC55_1915 816f06c70461a3de0b197e440853a2c6 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 17-10-2018 IPR020081 SsrA-binding protein, conserved site FORC55_1232 a5c022145335fa0b64559705797b3bc2 228 Pfam PF12431 Transcriptional regulator 133 159 8.8E-9 T 17-10-2018 IPR028141 Transcriptional regulator FORC55_1232 a5c022145335fa0b64559705797b3bc2 228 PIRSF PIRSF006171 1 226 3.3E-83 T 17-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 FORC55_1232 a5c022145335fa0b64559705797b3bc2 228 SMART SM00448 3 116 4.0E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1232 a5c022145335fa0b64559705797b3bc2 228 Pfam PF00072 Response regulator receiver domain 6 116 1.5E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1232 a5c022145335fa0b64559705797b3bc2 228 Gene3D G3DSA:3.40.50.12740 3 208 1.3E-28 T 17-10-2018 FORC55_1232 a5c022145335fa0b64559705797b3bc2 228 SUPERFAMILY SSF52172 3 184 6.4E-33 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0014 36fe69151aa4b33e08506d6b759ccd89 326 Gene3D G3DSA:3.40.50.720 126 294 4.0E-123 T 17-10-2018 FORC55_0014 36fe69151aa4b33e08506d6b759ccd89 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.0E-4 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 FORC55_0014 36fe69151aa4b33e08506d6b759ccd89 326 SUPERFAMILY SSF51735 116 290 9.61E-37 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0014 36fe69151aa4b33e08506d6b759ccd89 326 SUPERFAMILY SSF50129 2 144 3.62E-44 T 17-10-2018 IPR011032 GroES-like superfamily FORC55_0014 36fe69151aa4b33e08506d6b759ccd89 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 5.5E-14 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 FORC55_0014 36fe69151aa4b33e08506d6b759ccd89 326 Gene3D G3DSA:3.90.180.10 17 325 4.0E-123 T 17-10-2018 FORC55_0014 36fe69151aa4b33e08506d6b759ccd89 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 2.7E-138 T 17-10-2018 IPR014188 Acrylyl-CoA reductase AcuI FORC55_0014 36fe69151aa4b33e08506d6b759ccd89 326 SMART SM00829 9 324 4.4E-6 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SMART SM00419 187 235 1.1E-14 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.6E-16 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Gene3D G3DSA:2.60.120.10 43 164 2.5E-49 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SMART SM00100 30 151 1.4E-20 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.4E-15 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-11 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-11 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SUPERFAMILY SSF46785 165 244 4.09E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Gene3D G3DSA:1.10.10.10 165 250 1.8E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 17-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 FORC55_1372 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SUPERFAMILY SSF51206 23 162 1.22E-31 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_1209 5a5453b1eea433a852dc5bfc26a613f3 382 Pfam PF06965 Na+/H+ antiporter 1 7 373 3.6E-144 T 17-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 FORC55_1209 5a5453b1eea433a852dc5bfc26a613f3 382 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 381 23.53 T 17-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 FORC55_1209 5a5453b1eea433a852dc5bfc26a613f3 382 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 2.6E-190 T 17-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 FORC55_1209 5a5453b1eea433a852dc5bfc26a613f3 382 Gene3D G3DSA:1.20.1530.10 2 380 8.0E-147 T 17-10-2018 IPR023171 Na/H antiporter domain superfamily FORC55_1498 c45d92b8b2f616053db12a57cfdaa429 282 Gene3D G3DSA:3.40.1190.20 1 282 2.4E-101 T 17-10-2018 IPR029056 Ribokinase-like FORC55_1498 c45d92b8b2f616053db12a57cfdaa429 282 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 12 269 1.7E-98 T 17-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 FORC55_1498 c45d92b8b2f616053db12a57cfdaa429 282 Pfam PF08543 Phosphomethylpyrimidine kinase 19 267 1.5E-94 T 17-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 FORC55_1498 c45d92b8b2f616053db12a57cfdaa429 282 SUPERFAMILY SSF53613 9 272 6.55E-81 T 17-10-2018 IPR029056 Ribokinase-like FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 Gene3D G3DSA:3.40.50.300 329 581 3.0E-98 T 17-10-2018 FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 SMART SM00382 368 561 1.6E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 SUPERFAMILY SSF52540 331 580 2.71E-95 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 SUPERFAMILY SSF90123 14 327 2.09E-74 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 4.9E-249 T 17-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 Pfam PF00664 ABC transporter transmembrane region 28 293 2.0E-56 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 Gene3D G3DSA:1.20.1560.10 2 328 1.9E-81 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_0956 d0de5b00880d2752ccb706e9936d2497 582 Pfam PF00005 ABC transporter 359 509 1.8E-35 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2277 aa1090cba7f8411f10c5dc4f14629903 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 294 1.9E-126 T 17-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 FORC55_2277 aa1090cba7f8411f10c5dc4f14629903 295 Gene3D G3DSA:3.40.50.1100 37 142 1.1E-112 T 17-10-2018 FORC55_2277 aa1090cba7f8411f10c5dc4f14629903 295 SUPERFAMILY SSF53686 5 290 4.98E-90 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme FORC55_2277 aa1090cba7f8411f10c5dc4f14629903 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 6 294 2.6E-150 T 17-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 FORC55_2277 aa1090cba7f8411f10c5dc4f14629903 295 Gene3D G3DSA:3.40.50.1100 11 290 1.1E-112 T 17-10-2018 FORC55_2277 aa1090cba7f8411f10c5dc4f14629903 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 283 1.3E-65 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme FORC55_2277 aa1090cba7f8411f10c5dc4f14629903 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 17-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 358 1.7E-31 T 17-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 551 689 1.9E-50 T 17-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 SUPERFAMILY SSF52540 32 222 2.51E-56 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1728 d6c66fd89b2127565a71819e78141248 692 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.7E-131 T 17-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 SUPERFAMILY SSF48019 243 361 3.91E-32 T 17-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 Gene3D G3DSA:1.10.8.60 8 239 3.4E-101 T 17-10-2018 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.9E-44 T 17-10-2018 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 Gene3D G3DSA:3.30.300.150 549 674 1.9E-43 T 17-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 Gene3D G3DSA:3.40.50.300 13 177 3.4E-101 T 17-10-2018 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 SMART SM00382 37 179 1.5E-5 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1728 d6c66fd89b2127565a71819e78141248 692 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 478 549 3.6E-20 T 17-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1728 d6c66fd89b2127565a71819e78141248 692 Gene3D G3DSA:1.20.272.10 242 361 4.6E-41 T 17-10-2018 FORC55_1029 1cced617d51ed20dfa8a77ff3d5d4340 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 5.4E-18 T 17-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 FORC55_1029 1cced617d51ed20dfa8a77ff3d5d4340 233 SUPERFAMILY SSF55729 81 231 1.45E-20 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_1029 1cced617d51ed20dfa8a77ff3d5d4340 233 PIRSF PIRSF037208 1 233 6.7E-82 T 17-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 FORC55_1029 1cced617d51ed20dfa8a77ff3d5d4340 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 37.322 T 17-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 FORC55_1029 1cced617d51ed20dfa8a77ff3d5d4340 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 226 3.0E-32 T 17-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 FORC55_0676 d95e7a7e7a8aab568738cd68b5f246c0 286 Gene3D G3DSA:3.40.50.150 89 281 2.2E-57 T 17-10-2018 FORC55_0676 d95e7a7e7a8aab568738cd68b5f246c0 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 282 1.0E-74 T 17-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 FORC55_0676 d95e7a7e7a8aab568738cd68b5f246c0 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 280 46.296 T 17-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 FORC55_0676 d95e7a7e7a8aab568738cd68b5f246c0 286 Gene3D G3DSA:1.10.8.10 3 88 3.6E-23 T 17-10-2018 FORC55_0676 d95e7a7e7a8aab568738cd68b5f246c0 286 SUPERFAMILY SSF53335 5 280 2.05E-58 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0676 d95e7a7e7a8aab568738cd68b5f246c0 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_0676 d95e7a7e7a8aab568738cd68b5f246c0 286 Pfam PF13847 Methyltransferase domain 116 245 1.7E-17 T 17-10-2018 IPR025714 Methyltransferase domain FORC55_0676 d95e7a7e7a8aab568738cd68b5f246c0 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 276 4.7E-87 T 17-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 FORC55_1211 5189a6c5aa21b9dc9541f4eac5c6f558 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 7.0E-29 T 17-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 FORC55_1211 5189a6c5aa21b9dc9541f4eac5c6f558 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 145 1.9E-33 T 17-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 FORC55_1211 5189a6c5aa21b9dc9541f4eac5c6f558 414 Gene3D G3DSA:3.30.360.10 159 355 9.1E-143 T 17-10-2018 FORC55_1211 5189a6c5aa21b9dc9541f4eac5c6f558 414 Gene3D G3DSA:3.40.50.720 4 398 9.1E-143 T 17-10-2018 FORC55_1211 5189a6c5aa21b9dc9541f4eac5c6f558 414 SUPERFAMILY SSF51735 1 178 2.02E-16 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 Gene3D G3DSA:3.40.190.10 112 286 1.2E-53 T 17-10-2018 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 PIRSF PIRSF001500 1 383 4.5E-146 T 17-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 Gene3D G3DSA:3.40.190.10 192 277 1.2E-53 T 17-10-2018 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 Pfam PF00800 Prephenate dehydratase 109 290 2.3E-58 T 17-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 Gene3D G3DSA:3.30.70.260 295 382 1.1E-25 T 17-10-2018 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 SUPERFAMILY SSF55021 283 380 5.61E-27 T 17-10-2018 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 328 335 - T 17-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 SUPERFAMILY SSF48600 7 95 1.83E-20 T 17-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 Gene3D G3DSA:1.20.59.10 2 111 2.8E-32 T 17-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 Pfam PF01817 Chorismate mutase type II 12 91 2.7E-18 T 17-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 17-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 8 91 1.9E-27 T 17-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 SUPERFAMILY SSF53850 108 294 3.8E-55 T 17-10-2018 FORC55_2033 6fcb6df56c1386ccc7b7d1bea5994c88 391 SMART SM00830 12 93 9.3E-24 T 17-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 FORC55_0867 b1e3b67877b1c1c260a4b09f20d063a2 332 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 7.6E-134 T 17-10-2018 FORC55_0867 b1e3b67877b1c1c260a4b09f20d063a2 332 Pfam PF13378 Enolase C-terminal domain-like 130 276 1.2E-11 T 17-10-2018 IPR029065 Enolase C-terminal domain-like FORC55_0867 b1e3b67877b1c1c260a4b09f20d063a2 332 SUPERFAMILY SSF51604 104 317 2.62E-44 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily FORC55_0867 b1e3b67877b1c1c260a4b09f20d063a2 332 SMART SM00922 116 211 1.1E-5 T 17-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal FORC55_0867 b1e3b67877b1c1c260a4b09f20d063a2 332 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 21.957 T 17-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 FORC55_0867 b1e3b67877b1c1c260a4b09f20d063a2 332 Gene3D G3DSA:3.30.390.10 4 306 9.1E-121 T 17-10-2018 IPR029017 Enolase-like, N-terminal FORC55_0867 b1e3b67877b1c1c260a4b09f20d063a2 332 SUPERFAMILY SSF54826 1 99 3.57E-28 T 17-10-2018 FORC55_0867 b1e3b67877b1c1c260a4b09f20d063a2 332 Gene3D G3DSA:3.20.20.120 99 300 9.1E-121 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 SMART SM00271 275 331 7.3E-4 T 17-10-2018 IPR001623 DnaJ domain FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 SUPERFAMILY SSF81901 25 153 1.12E-21 T 17-10-2018 FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 Pfam PF08238 Sel1 repeat 34 69 7.8E-9 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 Pfam PF08238 Sel1 repeat 71 105 2.1E-5 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 SMART SM00671 34 69 1.8E-9 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 SMART SM00671 70 105 2.1E-5 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 Gene3D G3DSA:1.10.287.110 266 338 3.9E-14 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 SUPERFAMILY SSF46565 276 333 9.94E-14 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_1592 c87680b9d13bfd03249f7870dc92560d 338 Gene3D G3DSA:1.25.40.10 17 168 3.2E-27 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0343 6162642868563ad3e0c89576aded44e5 530 SUPERFAMILY SSF161098 11 256 1.96E-40 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0343 6162642868563ad3e0c89576aded44e5 530 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 11 517 4.2E-165 T 17-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 FORC55_0343 6162642868563ad3e0c89576aded44e5 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 258 2.2E-10 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_0343 6162642868563ad3e0c89576aded44e5 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 362 516 8.2E-7 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_0343 6162642868563ad3e0c89576aded44e5 530 SUPERFAMILY SSF161098 277 522 2.18E-31 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0343 6162642868563ad3e0c89576aded44e5 530 Gene3D G3DSA:1.10.3720.10 283 528 4.5E-26 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0343 6162642868563ad3e0c89576aded44e5 530 Gene3D G3DSA:1.10.3720.10 5 263 3.3E-40 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 PIRSF PIRSF000445 1 419 3.7E-157 T 17-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 Gene3D G3DSA:3.30.460.30 1 156 2.7E-59 T 17-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 2.7E-22 T 17-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 2.9E-145 T 17-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 1.7E-49 T 17-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 Gene3D G3DSA:3.40.50.720 159 311 8.0E-44 T 17-10-2018 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 SUPERFAMILY SSF69742 1 156 5.89E-49 T 17-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 SUPERFAMILY SSF69075 315 416 4.45E-27 T 17-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.7E-52 T 17-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 SUPERFAMILY SSF51735 161 313 2.67E-36 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.751 T 17-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0674 2f196f03fd1c1701849dba298d1cc06e 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 17-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 Gene3D G3DSA:1.10.150.20 170 232 1.9E-13 T 17-10-2018 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 Gene3D G3DSA:3.30.70.270 8 168 8.9E-65 T 17-10-2018 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 SUPERFAMILY SSF56672 3 238 4.54E-90 T 17-10-2018 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 Gene3D G3DSA:3.30.1490.100 241 354 1.9E-25 T 17-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 Gene3D G3DSA:2.30.40.20 25 77 8.9E-65 T 17-10-2018 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 340 3.5E-5 T 17-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 Pfam PF11798 IMS family HHH motif 170 201 3.3E-6 T 17-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.362 T 17-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 Pfam PF00817 impB/mucB/samB family 11 158 2.0E-49 T 17-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 FORC55_0575 a2ad91f3a069c3f94f15933803db6298 360 SUPERFAMILY SSF100879 245 353 3.34E-23 T 17-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 FORC55_1952 22a9ba9ef53e5863f0ef2b121f6dc332 448 PIRSF PIRSF005348 1 448 2.1E-163 T 17-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 FORC55_1952 22a9ba9ef53e5863f0ef2b121f6dc332 448 Pfam PF03390 2-hydroxycarboxylate transporter family 25 442 1.5E-148 T 17-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 SUPERFAMILY SSF55874 408 583 3.67E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 Pfam PF02743 Cache domain 42 237 1.8E-12 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 419 1.1E-17 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 Gene3D G3DSA:3.40.50.2300 585 726 1.0E-32 T 17-10-2018 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 SUPERFAMILY SSF52172 598 725 6.12E-31 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 SMART SM00448 600 714 1.1E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 3.5E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 3.5E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 3.5E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 3.5E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 466 579 9.3E-30 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 SMART SM00387 466 581 1.3E-36 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 SUPERFAMILY SSF47384 341 420 1.06E-18 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 Gene3D G3DSA:3.30.565.10 418 584 8.2E-49 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 Gene3D G3DSA:3.30.450.20 36 207 1.7E-19 T 17-10-2018 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 Gene3D G3DSA:1.10.287.130 319 417 2.6E-25 T 17-10-2018 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 Pfam PF00072 Response regulator receiver domain 602 714 1.7E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1005 410bda9bb626da3eb769ae12d434daf7 734 SMART SM00388 354 419 1.8E-23 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1914 ba23ba1dd12ea29020e2674bb79fe67f 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 8.1E-32 T 17-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 FORC55_1914 ba23ba1dd12ea29020e2674bb79fe67f 144 Gene3D G3DSA:3.30.530.20 1 144 3.2E-39 T 17-10-2018 IPR023393 START-like domain superfamily FORC55_1914 ba23ba1dd12ea29020e2674bb79fe67f 144 SUPERFAMILY SSF55961 1 143 1.94E-34 T 17-10-2018 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 Gene3D G3DSA:3.40.50.1000 1 164 1.7E-44 T 17-10-2018 IPR023214 HAD superfamily FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 Gene3D G3DSA:3.30.230.40 257 357 1.8E-36 T 17-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 SUPERFAMILY SSF54211 169 253 6.32E-33 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 SUPERFAMILY SSF54211 254 344 1.26E-31 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 17-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 Gene3D G3DSA:3.30.230.40 165 256 1.9E-36 T 17-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 4.7E-79 T 17-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.7E-66 T 17-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 SUPERFAMILY SSF56784 3 157 2.89E-38 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 126 1.8E-5 T 17-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 38.045 T 17-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.13 T 17-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 17-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 7.4E-28 T 17-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 FORC55_1649 98d2ccee68ef17086053a049a339ae07 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 3.4E-46 T 17-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.381 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Gene3D G3DSA:3.40.50.620 33 565 0.0 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 1.6E-25 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 1.7E-7 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 8.5E-9 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.8E-79 T 17-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Gene3D G3DSA:3.10.20.590 797 857 1.5E-23 T 17-10-2018 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 SUPERFAMILY SSF50677 226 415 3.56E-59 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 17-10-2018 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 SUPERFAMILY SSF47323 661 857 3.74E-34 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.3E-52 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.3E-52 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.3E-52 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 4.3E-52 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.3E-52 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.3E-52 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 4.3E-52 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 819 2.5E-15 T 17-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Gene3D G3DSA:3.10.330.110 566 627 0.0 T 17-10-2018 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 SUPERFAMILY SSF52374 4 667 1.79E-145 T 17-10-2018 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1818 ad558e9d2ec147b5835a726ebf38ae1b 858 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Gene3D G3DSA:3.30.2090.10 716 804 5.4E-272 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.8E-31 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.8E-31 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.8E-31 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.8E-31 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.8E-31 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.8E-31 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.8E-31 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 6.1E-244 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 SUPERFAMILY SSF82693 46 127 8.89E-20 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 SUPERFAMILY SSF82714 185 269 6.28E-17 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 17-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Gene3D G3DSA:3.30.70.1430 42 812 5.4E-272 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Gene3D G3DSA:1.20.1640.10 15 508 5.4E-272 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Gene3D G3DSA:3.30.70.1430 562 664 5.4E-272 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 SUPERFAMILY SSF82866 798 1037 1.07E-51 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 SUPERFAMILY SSF82866 294 498 1.11E-42 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Gene3D G3DSA:3.30.70.1440 665 862 5.4E-272 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Gene3D G3DSA:3.30.2090.10 182 274 5.4E-272 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 SUPERFAMILY SSF82714 716 800 3.27E-18 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Gene3D G3DSA:3.30.70.1320 135 328 5.4E-272 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 Gene3D G3DSA:1.20.1640.10 509 1030 5.4E-272 T 17-10-2018 FORC55_2972 b82c111000a07548c1f7ba4945051f56 1041 SUPERFAMILY SSF82693 138 328 1.6E-22 T 17-10-2018 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 SUPERFAMILY SSF52540 3 430 5.31E-183 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 221.496 T 17-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 17-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 Gene3D G3DSA:3.90.170.10 267 432 7.3E-70 T 17-10-2018 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 SMART SM00788 4 425 0.0 T 17-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 425 3.8E-195 T 17-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 Gene3D G3DSA:3.40.440.10 6 249 2.0E-106 T 17-10-2018 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 Gene3D G3DSA:1.10.300.10 102 201 2.0E-106 T 17-10-2018 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 17-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 FORC55_0282 90fd7e7839700bc3634e872caa0ff89f 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 2.7E-182 T 17-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 Gene3D G3DSA:3.40.50.720 1 346 5.1E-145 T 17-10-2018 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 PIRSF PIRSF000148 1 360 1.2E-59 T 17-10-2018 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 Gene3D G3DSA:3.30.360.10 124 340 5.1E-145 T 17-10-2018 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 251 265 - T 17-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 133 343 1.1E-57 T 17-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 356 7.4E-182 T 17-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 SMART SM00859 1 111 6.5E-8 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 SUPERFAMILY SSF51735 1 136 1.18E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 1 108 4.7E-16 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 FORC55_0809 7db1ece7c1ce08d927c50d23e747a49e 360 SUPERFAMILY SSF55347 123 344 8.51E-79 T 17-10-2018 FORC55_2726 f9ec17c39b2e3a463f9f79826f8d2e1a 193 SUPERFAMILY SSF52833 35 192 1.01E-37 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_2726 f9ec17c39b2e3a463f9f79826f8d2e1a 193 Gene3D G3DSA:3.40.30.10 21 193 6.8E-40 T 17-10-2018 FORC55_2726 f9ec17c39b2e3a463f9f79826f8d2e1a 193 Pfam PF02630 SCO1/SenC 30 174 2.4E-34 T 17-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_2576 ab3baba8ec1a60ff8cb9283f5cc78a2d 159 SUPERFAMILY SSF88723 1 122 3.08E-11 T 17-10-2018 IPR029060 PIN-like domain superfamily FORC55_2576 ab3baba8ec1a60ff8cb9283f5cc78a2d 159 Gene3D G3DSA:3.40.50.1010 19 108 2.3E-5 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 1.1E-53 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 SUPERFAMILY SSF52821 455 563 5.37E-25 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 Gene3D G3DSA:3.40.250.10 471 565 2.8E-25 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 SUPERFAMILY SSF55424 344 466 7.22E-35 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 Gene3D G3DSA:3.50.50.60 3 361 2.4E-189 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 SMART SM00450 473 567 1.9E-13 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.1E-23 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.1E-23 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.1E-23 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.1E-23 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 3.1E-23 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 Pfam PF00581 Rhodanese-like domain 482 563 1.2E-10 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.6E-19 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.6E-19 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.6E-19 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.6E-19 T 17-10-2018 FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 Gene3D G3DSA:3.50.50.60 115 461 2.4E-189 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 SUPERFAMILY SSF51905 1 341 9.43E-40 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3290 c2a089a1f51cf054bcbbce650a2b30a9 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.5E-16 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 FORC55_2774 d9f76ea52788dad89f9d4860ed25ddc6 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 216 8.9E-16 T 17-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 FORC55_2774 d9f76ea52788dad89f9d4860ed25ddc6 346 SUPERFAMILY SSF51735 3 203 1.58E-52 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2774 d9f76ea52788dad89f9d4860ed25ddc6 346 Gene3D G3DSA:3.40.50.720 7 315 9.5E-122 T 17-10-2018 FORC55_2774 d9f76ea52788dad89f9d4860ed25ddc6 346 Gene3D G3DSA:3.30.360.10 128 329 9.5E-122 T 17-10-2018 FORC55_2774 d9f76ea52788dad89f9d4860ed25ddc6 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 2.1E-22 T 17-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 Pfam PF00005 ABC transporter 336 466 2.4E-21 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 Pfam PF12848 ABC transporter 224 309 9.1E-21 T 17-10-2018 IPR032781 ABC-transporter extension domain FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 Gene3D G3DSA:3.40.50.300 282 529 9.4E-52 T 17-10-2018 FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 SUPERFAMILY SSF52540 298 520 4.79E-44 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 SUPERFAMILY SSF52540 7 237 8.89E-44 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 Gene3D G3DSA:3.40.50.300 2 281 5.8E-56 T 17-10-2018 FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 Pfam PF00005 ABC transporter 18 184 7.3E-21 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 SMART SM00382 26 238 1.1E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1304 a0fb6796e24beeb7d11d9888af021053 530 SMART SM00382 343 511 1.6E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1365 1ef901130177c949bc803544cc9219a4 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 2.2E-82 T 17-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO FORC55_1365 1ef901130177c949bc803544cc9219a4 206 SUPERFAMILY SSF46626 21 202 1.17E-28 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_1365 1ef901130177c949bc803544cc9219a4 206 Gene3D G3DSA:1.10.760.10 46 206 1.1E-73 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_1365 1ef901130177c949bc803544cc9219a4 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 2.2E-82 T 17-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO FORC55_2778 46ce768bcec9b044b717b32c8ba2d715 592 Pfam PF00916 Sulfate permease family 27 392 5.8E-82 T 17-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 FORC55_2778 46ce768bcec9b044b717b32c8ba2d715 592 Gene3D G3DSA:3.30.750.24 439 558 2.3E-19 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_2778 46ce768bcec9b044b717b32c8ba2d715 592 Pfam PF01740 STAS domain 447 540 1.9E-14 T 17-10-2018 IPR002645 STAS domain FORC55_2778 46ce768bcec9b044b717b32c8ba2d715 592 SUPERFAMILY SSF52091 449 541 7.85E-11 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_2424 ea3ab3d59116ac343651547bf9509594 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 17-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2424 ea3ab3d59116ac343651547bf9509594 156 Gene3D G3DSA:1.10.455.10 2 155 9.6E-65 T 17-10-2018 IPR036823 Ribosomal protein S7 domain superfamily FORC55_2424 ea3ab3d59116ac343651547bf9509594 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.981 T 17-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 FORC55_2424 ea3ab3d59116ac343651547bf9509594 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.6E-71 T 17-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 FORC55_2424 ea3ab3d59116ac343651547bf9509594 156 PIRSF PIRSF002122 3 156 1.1E-63 T 17-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 FORC55_2424 ea3ab3d59116ac343651547bf9509594 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.2E-66 T 17-10-2018 IPR023798 Ribosomal protein S7 domain FORC55_2424 ea3ab3d59116ac343651547bf9509594 156 SUPERFAMILY SSF47973 6 149 1.7E-60 T 17-10-2018 IPR036823 Ribosomal protein S7 domain superfamily FORC55_2564 2ebcb25dc395f35c8cdb08c6ae7775a0 78 SUPERFAMILY SSF143800 2 76 6.47E-30 T 17-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2564 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Gene3D G3DSA:2.30.170.40 2 78 8.3E-33 T 17-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2564 2ebcb25dc395f35c8cdb08c6ae7775a0 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.3E-27 T 17-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2564 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Pfam PF00830 Ribosomal L28 family 3 62 8.4E-26 T 17-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2564 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.185 T 17-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_1179 2d142578561b619a5b95e51030111eb8 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 3.7E-7 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 FORC55_1179 2d142578561b619a5b95e51030111eb8 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 3.7E-7 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 FORC55_1179 2d142578561b619a5b95e51030111eb8 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 3.7E-7 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 FORC55_1179 2d142578561b619a5b95e51030111eb8 365 Pfam PF12698 ABC-2 family transporter protein 24 358 1.0E-47 T 17-10-2018 FORC55_1198 dbb9a0cf3f1cd1000f0e67fe77404b30 219 SUPERFAMILY SSF52172 1 133 4.13E-37 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1198 dbb9a0cf3f1cd1000f0e67fe77404b30 219 SUPERFAMILY SSF46894 119 217 5.67E-27 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_1198 dbb9a0cf3f1cd1000f0e67fe77404b30 219 SMART SM00862 145 216 3.0E-23 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_1198 dbb9a0cf3f1cd1000f0e67fe77404b30 219 Gene3D G3DSA:3.40.50.2300 1 122 2.2E-37 T 17-10-2018 FORC55_1198 dbb9a0cf3f1cd1000f0e67fe77404b30 219 SMART SM00448 1 112 1.6E-34 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1198 dbb9a0cf3f1cd1000f0e67fe77404b30 219 Pfam PF00072 Response regulator receiver domain 3 113 8.4E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1198 dbb9a0cf3f1cd1000f0e67fe77404b30 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.5E-22 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_1198 dbb9a0cf3f1cd1000f0e67fe77404b30 219 Gene3D G3DSA:1.10.10.10 123 219 1.3E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2254 c207da93b6c307a75cd45ef705cbf270 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.703 T 17-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 FORC55_2254 c207da93b6c307a75cd45ef705cbf270 184 SUPERFAMILY SSF50447 15 102 1.24E-24 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_2254 c207da93b6c307a75cd45ef705cbf270 184 SUPERFAMILY SSF50346 108 182 1.86E-19 T 17-10-2018 IPR011033 PRC-barrel-like superfamily FORC55_2254 c207da93b6c307a75cd45ef705cbf270 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 183 3.5E-56 T 17-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 FORC55_2254 c207da93b6c307a75cd45ef705cbf270 184 Pfam PF05239 PRC-barrel domain 105 179 1.4E-12 T 17-10-2018 IPR027275 PRC-barrel domain FORC55_2254 c207da93b6c307a75cd45ef705cbf270 184 Gene3D G3DSA:2.30.30.240 103 184 3.4E-31 T 17-10-2018 FORC55_2254 c207da93b6c307a75cd45ef705cbf270 184 Gene3D G3DSA:2.40.30.60 6 102 1.2E-32 T 17-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 FORC55_2254 c207da93b6c307a75cd45ef705cbf270 184 Pfam PF01782 RimM N-terminal domain 17 97 7.2E-26 T 17-10-2018 IPR002676 RimM, N-terminal GO:0006364 FORC55_0393 503dcf5b399ae3af8ad5a7b524d2b87a 601 Pfam PF00501 AMP-binding enzyme 17 466 2.3E-98 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_0393 503dcf5b399ae3af8ad5a7b524d2b87a 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_0393 503dcf5b399ae3af8ad5a7b524d2b87a 601 SUPERFAMILY SSF56801 7 596 5.1E-114 T 17-10-2018 FORC55_0393 503dcf5b399ae3af8ad5a7b524d2b87a 601 Gene3D G3DSA:3.40.50.12780 318 459 8.5E-32 T 17-10-2018 FORC55_0393 503dcf5b399ae3af8ad5a7b524d2b87a 601 Gene3D G3DSA:3.40.50.12780 1 315 2.4E-56 T 17-10-2018 FORC55_3412 c271b26bf79b7f9b4ef3b7770b5f2932 199 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 22 32 - T 17-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 FORC55_3412 c271b26bf79b7f9b4ef3b7770b5f2932 199 SUPERFAMILY SSF52266 20 197 6.72E-53 T 17-10-2018 FORC55_3412 c271b26bf79b7f9b4ef3b7770b5f2932 199 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 24 182 4.1E-24 T 17-10-2018 IPR013830 SGNH hydrolase-type esterase domain FORC55_3412 c271b26bf79b7f9b4ef3b7770b5f2932 199 Gene3D G3DSA:3.40.50.1110 19 199 2.2E-67 T 17-10-2018 IPR036514 SGNH hydrolase superfamily FORC55_0326 d63f5ea8495c9223efcb8d7c7f78ec73 215 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 37 209 38.092 T 17-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 FORC55_0326 d63f5ea8495c9223efcb8d7c7f78ec73 215 Gene3D G3DSA:3.40.50.300 16 214 1.6E-79 T 17-10-2018 FORC55_0326 d63f5ea8495c9223efcb8d7c7f78ec73 215 Pfam PF01583 Adenylylsulphate kinase 38 191 2.3E-71 T 17-10-2018 FORC55_0326 d63f5ea8495c9223efcb8d7c7f78ec73 215 SUPERFAMILY SSF52540 34 208 2.22E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0326 d63f5ea8495c9223efcb8d7c7f78ec73 215 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 21 204 3.9E-83 T 17-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 FORC55_2724 3140e444dc9379cb2566635811b513da 405 Gene3D G3DSA:1.10.3860.10 3 405 2.4E-71 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 FORC55_2724 3140e444dc9379cb2566635811b513da 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 7.6E-11 T 17-10-2018 FORC55_2724 3140e444dc9379cb2566635811b513da 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 7.6E-11 T 17-10-2018 FORC55_2724 3140e444dc9379cb2566635811b513da 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 7.6E-11 T 17-10-2018 FORC55_2724 3140e444dc9379cb2566635811b513da 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 7.6E-11 T 17-10-2018 FORC55_2724 3140e444dc9379cb2566635811b513da 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.623 T 17-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 FORC55_2724 3140e444dc9379cb2566635811b513da 405 SUPERFAMILY SSF118215 15 398 1.27E-96 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 FORC55_2724 3140e444dc9379cb2566635811b513da 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 397 5.1E-65 T 17-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 Gene3D G3DSA:3.40.50.2300 169 308 4.6E-27 T 17-10-2018 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 SUPERFAMILY SSF50341 16 157 2.09E-35 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 SMART SM00260 17 153 4.3E-24 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 Pfam PF00072 Response regulator receiver domain 184 302 4.9E-19 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 Pfam PF01584 CheW-like domain 21 155 4.9E-34 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 Gene3D G3DSA:2.40.50.180 39 153 3.0E-28 T 17-10-2018 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 SUPERFAMILY SSF52172 183 306 1.57E-26 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 Gene3D G3DSA:2.30.30.40 23 147 3.0E-28 T 17-10-2018 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 SMART SM00448 182 302 5.7E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0654 e7dfc48e5aba5881bae0aa00bc69fe04 308 PIRSF PIRSF002867 1 308 5.7E-103 T 17-10-2018 IPR024181 Chemotaxis response regulator CheV FORC55_0501 3b7b900f2af811c397d0a8f82d5210d1 312 Pfam PF04055 Radical SAM superfamily 43 201 1.5E-16 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_0501 3b7b900f2af811c397d0a8f82d5210d1 312 Pfam PF16199 Radical_SAM C-terminal domain 209 290 5.8E-20 T 17-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 FORC55_0501 3b7b900f2af811c397d0a8f82d5210d1 312 SMART SM00729 23 247 5.9E-41 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_0501 3b7b900f2af811c397d0a8f82d5210d1 312 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 1.9E-144 T 17-10-2018 IPR005911 Protein YhcC-like GO:0051536 FORC55_0501 3b7b900f2af811c397d0a8f82d5210d1 312 Gene3D G3DSA:3.80.30.20 41 272 9.6E-16 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe FORC55_0501 3b7b900f2af811c397d0a8f82d5210d1 312 SUPERFAMILY SSF102114 13 268 2.49E-47 T 17-10-2018 FORC55_1146 797faf87fc84c3138a417f54a86c3128 394 Gene3D G3DSA:1.10.3820.10 14 194 1.2E-38 T 17-10-2018 IPR038266 NapC/NirT cytochrome c superfamily FORC55_1146 797faf87fc84c3138a417f54a86c3128 394 SUPERFAMILY SSF48695 12 187 5.3E-61 T 17-10-2018 IPR036280 Multiheme cytochrome superfamily FORC55_1146 797faf87fc84c3138a417f54a86c3128 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 4.6E-74 T 17-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal FORC55_1146 797faf87fc84c3138a417f54a86c3128 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 3.0E-206 T 17-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 FORC55_1146 797faf87fc84c3138a417f54a86c3128 394 PIRSF PIRSF000014 1 394 2.5E-173 T 17-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 FORC55_0335 875f4d81612758cce50775be95c8660f 582 Gene3D G3DSA:3.10.20.310 196 272 9.4E-19 T 17-10-2018 FORC55_0335 875f4d81612758cce50775be95c8660f 582 Pfam PF01103 Surface antigen 286 579 5.7E-29 T 17-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 FORC55_0335 875f4d81612758cce50775be95c8660f 582 Gene3D G3DSA:2.40.160.50 273 582 4.6E-96 T 17-10-2018 FORC55_0335 875f4d81612758cce50775be95c8660f 582 Gene3D G3DSA:3.10.20.310 31 107 3.5E-23 T 17-10-2018 FORC55_0335 875f4d81612758cce50775be95c8660f 582 Gene3D G3DSA:3.10.20.310 109 195 6.0E-25 T 17-10-2018 FORC55_0335 875f4d81612758cce50775be95c8660f 582 Pfam PF17243 POTRA domain TamA domain 1 35 105 6.2E-20 T 17-10-2018 IPR035243 TamA, POTRA domain 1 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Gene3D G3DSA:3.20.20.20 342 643 1.3E-131 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 SUPERFAMILY SSF82282 8 400 6.67E-118 T 17-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Pfam PF00809 Pterin binding enzyme 361 599 4.3E-60 T 17-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 SUPERFAMILY SSF56507 904 1225 2.09E-130 T 17-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 SUPERFAMILY SSF51717 357 631 1.96E-87 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Pfam PF02310 B12 binding domain 749 843 2.4E-18 T 17-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Gene3D G3DSA:3.20.20.330 2 341 6.0E-127 T 17-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Gene3D G3DSA:3.40.50.280 745 896 2.2E-54 T 17-10-2018 FORC55_2399 db98af614825380c84b0646fdd776840 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 17-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 SUPERFAMILY SSF52242 744 895 8.63E-45 T 17-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 6.6E-80 T 17-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Pfam PF02607 B12 binding domain 660 734 1.4E-26 T 17-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 SUPERFAMILY SSF47644 654 740 7.59E-30 T 17-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Gene3D G3DSA:1.10.1240.10 650 738 3.5E-41 T 17-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Gene3D G3DSA:1.10.288.10 938 1094 4.5E-146 T 17-10-2018 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Gene3D G3DSA:3.10.196.10 909 1224 4.5E-146 T 17-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 PIRSF PIRSF000381 3 1197 0.0 T 17-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 5.4E-123 T 17-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2399 db98af614825380c84b0646fdd776840 1226 SMART SM01018 658 741 1.4E-45 T 17-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_0918 1738ad1d5d4e20a94b8a0d8c1e4e4de2 299 Gene3D G3DSA:1.10.3720.10 60 289 4.0E-18 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0918 1738ad1d5d4e20a94b8a0d8c1e4e4de2 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 296 2.0E-31 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_0918 1738ad1d5d4e20a94b8a0d8c1e4e4de2 299 SUPERFAMILY SSF161098 66 279 3.01E-15 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0818 4cf50f3009f1b510ab361c71f281eb03 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.068 T 17-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0818 4cf50f3009f1b510ab361c71f281eb03 56 SUPERFAMILY SSF57829 2 55 3.97E-18 T 17-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 FORC55_0818 4cf50f3009f1b510ab361c71f281eb03 56 Pfam PF01783 Ribosomal L32p protein family 2 56 5.2E-20 T 17-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0818 4cf50f3009f1b510ab361c71f281eb03 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 6.5E-20 T 17-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.0E-37 T 17-10-2018 IPR006512 YidE/YbjL duplication FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF06826 Predicted Permease Membrane Region 387 554 3.7E-43 T 17-10-2018 IPR006512 YidE/YbjL duplication FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF02080 TrkA-C domain 228 279 1.9E-8 T 17-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF02080 TrkA-C domain 307 372 7.4E-9 T 17-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 Gene3D G3DSA:3.30.70.1450 292 370 1.3E-5 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 558 59.491 T 17-10-2018 IPR023017 Transport protein YbjL, putative FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 SUPERFAMILY SSF116726 292 375 1.83E-10 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 4.1E-30 T 17-10-2018 IPR006512 YidE/YbjL duplication FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 542 8.6E-37 T 17-10-2018 IPR006512 YidE/YbjL duplication FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 SUPERFAMILY SSF116726 228 283 5.23E-10 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_1638 9aaaebc383d6cb4cab66885dbbe22b9b 558 Gene3D G3DSA:3.30.70.1450 224 286 3.9E-9 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 Gene3D G3DSA:3.20.20.10 35 277 8.4E-156 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 SUPERFAMILY SSF50621 259 414 7.33E-53 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.301 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 17-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.8E-30 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.8E-30 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 1.8E-30 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.8E-30 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 2.4E-170 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 5.4E-72 T 17-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 SUPERFAMILY SSF51419 27 284 1.03E-81 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 17-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.8E-25 T 17-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 FORC55_0102 8571c2755f9c348bf6655981f5949d13 417 Gene3D G3DSA:2.40.37.10 17 404 8.4E-156 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 Gene3D G3DSA:3.40.50.40 210 337 2.0E-46 T 17-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 17-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 17-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 17-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 PIRSF PIRSF500176 2 333 1.7E-109 T 17-10-2018 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 PIRSF PIRSF001220 1 335 5.5E-95 T 17-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 17-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 SMART SM00870 5 324 4.2E-140 T 17-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 Pfam PF00710 Asparaginase, N-terminal 5 192 5.7E-66 T 17-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 17-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 Gene3D G3DSA:3.40.50.1170 1 209 2.1E-94 T 17-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 SUPERFAMILY SSF53774 3 336 1.7E-112 T 17-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 FORC55_0846 9f3e1bbdff513eb7358a66996cdd6df3 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.0E-114 T 17-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 SMART SM00267 453 618 1.2E-47 T 17-10-2018 IPR000160 GGDEF domain FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 Gene3D G3DSA:3.30.450.20 76 205 5.6E-12 T 17-10-2018 FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 1.7E-39 T 17-10-2018 IPR000160 GGDEF domain FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 SMART SM00086 411 453 5.7E-6 T 17-10-2018 IPR001610 PAC motif FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 SUPERFAMILY SSF103190 39 205 1.1E-32 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 Gene3D G3DSA:3.30.450.20 330 462 2.2E-28 T 17-10-2018 FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 SUPERFAMILY SSF103190 206 297 7.85E-17 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 SUPERFAMILY SSF55073 469 617 3.06E-40 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 Gene3D G3DSA:3.30.70.270 463 625 4.6E-47 T 17-10-2018 FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 Pfam PF00990 Diguanylate cyclase, GGDEF domain 466 614 9.3E-37 T 17-10-2018 IPR000160 GGDEF domain FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 Pfam PF13426 PAS domain 351 451 2.2E-14 T 17-10-2018 IPR000014 PAS domain FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 SUPERFAMILY SSF55785 351 450 1.2E-23 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_3337 b6afe9a6563b33a1c830ebe519470433 627 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 343 460 8.5E-19 T 17-10-2018 IPR000014 PAS domain FORC55_1800 c1a61c70d8e4cb4d4a3d1965b89c899d 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 1.2E-23 T 17-10-2018 IPR002810 NfeD-like, C-terminal domain FORC55_1800 c1a61c70d8e4cb4d4a3d1965b89c899d 149 SUPERFAMILY SSF141322 94 148 6.8E-7 T 17-10-2018 FORC55_1800 c1a61c70d8e4cb4d4a3d1965b89c899d 149 Gene3D G3DSA:2.40.50.140 78 149 1.2E-10 T 17-10-2018 FORC55_2065 839bbb0acd2877483bb12482588afa05 172 Gene3D G3DSA:3.90.79.10 1 159 1.6E-50 T 17-10-2018 FORC55_2065 839bbb0acd2877483bb12482588afa05 172 SUPERFAMILY SSF55811 6 152 1.11E-31 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_2065 839bbb0acd2877483bb12482588afa05 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.33 T 17-10-2018 IPR022927 RNA pyrophosphohydrolase RppH FORC55_2065 839bbb0acd2877483bb12482588afa05 172 Pfam PF00293 NUDIX domain 7 145 1.4E-26 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_2065 839bbb0acd2877483bb12482588afa05 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 8.8E-8 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 FORC55_2065 839bbb0acd2877483bb12482588afa05 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 8.8E-8 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 FORC55_2065 839bbb0acd2877483bb12482588afa05 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 FORC55_3416 59ee4dffd6a157a479eadf17a3a2a2da 209 Pfam PF12339 DNA-J related protein 17 138 1.6E-40 T 17-10-2018 IPR021059 DnaJ-related protein, N-terminal FORC55_3416 59ee4dffd6a157a479eadf17a3a2a2da 209 SUPERFAMILY SSF46565 125 206 5.5E-13 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_3416 59ee4dffd6a157a479eadf17a3a2a2da 209 Pfam PF00226 DnaJ domain 160 206 1.8E-10 T 17-10-2018 IPR001623 DnaJ domain FORC55_3416 59ee4dffd6a157a479eadf17a3a2a2da 209 Gene3D G3DSA:1.10.287.110 154 208 3.1E-11 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_3416 59ee4dffd6a157a479eadf17a3a2a2da 209 SMART SM00271 153 208 7.5E-9 T 17-10-2018 IPR001623 DnaJ domain FORC55_2244 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 8.1E-8 T 17-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 FORC55_2244 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 8.1E-8 T 17-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 FORC55_2244 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 8.1E-8 T 17-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 FORC55_2244 91148d6bf5ae936b4f1d5af6edaac477 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 8.0E-14 T 17-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 FORC55_2244 91148d6bf5ae936b4f1d5af6edaac477 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 175 1.5E-11 T 17-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 FORC55_2244 91148d6bf5ae936b4f1d5af6edaac477 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 8.9E-75 T 17-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 FORC55_2244 91148d6bf5ae936b4f1d5af6edaac477 197 Gene3D G3DSA:2.102.10.10 43 190 1.4E-46 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 FORC55_2244 91148d6bf5ae936b4f1d5af6edaac477 197 SUPERFAMILY SSF50022 30 192 1.41E-42 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 SUPERFAMILY SSF55021 298 394 3.27E-19 T 17-10-2018 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.4E-122 T 17-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 Gene3D G3DSA:3.40.1160.10 6 290 5.9E-100 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 SUPERFAMILY SSF55021 377 449 8.59E-15 T 17-10-2018 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 7.8E-123 T 17-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 SUPERFAMILY SSF53633 6 293 9.95E-77 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 Gene3D G3DSA:1.20.120.1320 42 135 5.9E-100 T 17-10-2018 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 17-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 Pfam PF00696 Amino acid kinase family 6 278 2.1E-47 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 Gene3D G3DSA:3.30.70.260 304 447 1.1E-47 T 17-10-2018 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 Gene3D G3DSA:3.30.70.260 310 383 1.1E-47 T 17-10-2018 FORC55_2398 9bcbd5044990883bed1b468eedc931fe 451 PIRSF PIRSF000726 2 451 6.7E-127 T 17-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_2839 34d7f810e62079239bf09faa64258004 313 SUPERFAMILY SSF52402 1 142 4.02E-13 T 17-10-2018 FORC55_2839 34d7f810e62079239bf09faa64258004 313 Gene3D G3DSA:3.40.50.12370 1 313 3.6E-85 T 17-10-2018 FORC55_2839 34d7f810e62079239bf09faa64258004 313 SUPERFAMILY SSF52402 152 310 6.87E-20 T 17-10-2018 FORC55_2839 34d7f810e62079239bf09faa64258004 313 Pfam PF00582 Universal stress protein family 150 301 1.9E-15 T 17-10-2018 IPR006016 UspA FORC55_2839 34d7f810e62079239bf09faa64258004 313 Pfam PF00582 Universal stress protein family 4 140 1.3E-5 T 17-10-2018 IPR006016 UspA FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF14842 FliG N-terminal domain 21 121 3.5E-27 T 17-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 104 209 1.0E-26 T 17-10-2018 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 5.3E-58 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 5.3E-58 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 5.3E-58 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 288 314 5.3E-58 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 264 284 5.3E-58 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 242 262 5.3E-58 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 211 236 5.3E-58 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF01706 FliG C-terminal domain 234 340 1.3E-41 T 17-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 17 102 3.2E-17 T 17-10-2018 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 SUPERFAMILY SSF48029 18 134 8.37E-20 T 17-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF14841 FliG middle domain 131 203 1.4E-23 T 17-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 SUPERFAMILY SSF48029 130 341 1.83E-66 T 17-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 211 348 1.4E-43 T 17-10-2018 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 17 346 5.4E-94 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0719 6e7a9326044edb75cb6bb1bce716eba4 348 PIRSF PIRSF003161 16 348 1.8E-110 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 FORC55_0682 0418664a1fe89d90f7d34093a417a049 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 17-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 FORC55_0682 0418664a1fe89d90f7d34093a417a049 417 Pfam PF00860 Permease family 3 371 5.1E-93 T 17-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 FORC55_0682 0418664a1fe89d90f7d34093a417a049 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 395 4.7E-112 T 17-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 FORC55_3669 ab21c7b7b348644d684adca75d2c1a2c 175 Gene3D G3DSA:2.30.30.40 31 158 1.1E-31 T 17-10-2018 FORC55_3669 ab21c7b7b348644d684adca75d2c1a2c 175 Gene3D G3DSA:2.40.50.180 46 163 1.1E-31 T 17-10-2018 FORC55_3669 ab21c7b7b348644d684adca75d2c1a2c 175 Pfam PF01584 CheW-like domain 30 166 2.6E-32 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_3669 ab21c7b7b348644d684adca75d2c1a2c 175 SUPERFAMILY SSF50341 28 166 2.35E-32 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_3669 ab21c7b7b348644d684adca75d2c1a2c 175 SMART SM00260 25 164 8.0E-29 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_2157 2004ed31b8cf0ab81ba0a1f7a1747c36 606 SUPERFAMILY SSF52540 129 593 1.09E-57 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2157 2004ed31b8cf0ab81ba0a1f7a1747c36 606 Pfam PF12696 TraM recognition site of TraD and TraG 451 577 2.6E-12 T 17-10-2018 IPR032689 TraD/TraG, TraM recognition site FORC55_2157 2004ed31b8cf0ab81ba0a1f7a1747c36 606 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 599 7.5E-226 T 17-10-2018 IPR022458 Conjugative coupling factor TraG/TraD FORC55_2157 2004ed31b8cf0ab81ba0a1f7a1747c36 606 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 153 287 5.6E-10 T 17-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain FORC55_2157 2004ed31b8cf0ab81ba0a1f7a1747c36 606 Gene3D G3DSA:3.40.50.300 104 287 1.4E-13 T 17-10-2018 FORC55_2157 2004ed31b8cf0ab81ba0a1f7a1747c36 606 Gene3D G3DSA:3.40.50.300 385 604 2.6E-27 T 17-10-2018 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.40.50.720 2 139 1.4E-51 T 17-10-2018 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF116726 136 223 9.02E-10 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.40.50.720 233 366 5.3E-38 T 17-10-2018 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.30.70.1450 140 232 2.0E-21 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02080 TrkA-C domain 390 438 6.0E-9 T 17-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02080 TrkA-C domain 156 225 4.1E-11 T 17-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02254 TrkA-N domain 3 115 5.0E-29 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02254 TrkA-N domain 235 350 9.0E-25 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.9E-34 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.9E-34 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.9E-34 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.9E-34 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.9E-34 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF51735 232 376 1.11E-32 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.30.70.1450 367 458 6.7E-28 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF116726 390 437 5.75E-7 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_0030 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF51735 1 151 6.33E-36 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3606 44b63b1338970981440a6a338635d8de 412 Gene3D G3DSA:2.40.170.10 23 412 5.4E-109 T 17-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 FORC55_3606 44b63b1338970981440a6a338635d8de 412 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 396 0.0 T 17-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 FORC55_3606 44b63b1338970981440a6a338635d8de 412 SUPERFAMILY SSF56935 23 412 2.33E-108 T 17-10-2018 FORC55_3606 44b63b1338970981440a6a338635d8de 412 Hamap MF_01301 Maltoporin [lamB]. 1 412 42.201 T 17-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 FORC55_3606 44b63b1338970981440a6a338635d8de 412 Pfam PF02264 LamB porin 25 412 1.9E-102 T 17-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 SMART SM00387 283 390 1.1E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 387 7.1E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 Gene3D G3DSA:3.30.565.10 234 388 1.4E-29 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 SUPERFAMILY SSF52172 541 659 1.35E-34 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 SMART SM00448 542 656 1.1E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 Gene3D G3DSA:1.10.287.130 146 233 6.9E-6 T 17-10-2018 FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 Gene3D G3DSA:3.40.50.2300 530 660 7.6E-36 T 17-10-2018 FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 Pfam PF00072 Response regulator receiver domain 544 656 2.1E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 SUPERFAMILY SSF55874 228 393 2.23E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 SUPERFAMILY SSF47384 153 200 2.35E-5 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 2.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 387 2.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3160 7d415b7f8f60eca20483853fb56e3f05 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 2.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2317 284172d289f89c91e5f0dfcaa36f3d27 162 Hamap MF_00746 Protein SprT [sprT]. 8 161 42.106 T 17-10-2018 IPR023483 Uncharacterised protein family SprT FORC55_2317 284172d289f89c91e5f0dfcaa36f3d27 162 Pfam PF10263 SprT-like family 16 115 3.5E-18 T 17-10-2018 IPR006640 SprT-like FORC55_2317 284172d289f89c91e5f0dfcaa36f3d27 162 Pfam PF17283 SprT-like zinc ribbon domain 121 159 3.0E-9 T 17-10-2018 IPR035240 SprT-like, zinc ribbon domain FORC55_2317 284172d289f89c91e5f0dfcaa36f3d27 162 SMART SM00731 12 161 8.1E-65 T 17-10-2018 IPR006640 SprT-like FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 588 4.3E-275 T 17-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 SUPERFAMILY SSF56425 236 356 2.99E-42 T 17-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 Gene3D G3DSA:4.10.80.40 548 588 9.0E-22 T 17-10-2018 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 PIRSF PIRSF000171 1 580 1.2E-47 T 17-10-2018 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 Gene3D G3DSA:3.50.50.60 9 416 5.3E-170 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 9.7E-241 T 17-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 Gene3D G3DSA:1.20.58.100 432 547 5.2E-38 T 17-10-2018 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 Pfam PF00890 FAD binding domain 9 405 1.6E-118 T 17-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.0E-37 T 17-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 17-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 SUPERFAMILY SSF46977 451 588 2.75E-47 T 17-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 Gene3D G3DSA:3.90.700.10 246 350 5.3E-170 T 17-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0758 b098ade5beb0da834381bc202dd971aa 588 SUPERFAMILY SSF51905 6 438 9.72E-72 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 SMART SM00304 186 240 1.7E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 Gene3D G3DSA:3.30.450.20 68 160 7.7E-60 T 17-10-2018 FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 Pfam PF02743 Cache domain 3 148 6.0E-26 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 Gene3D G3DSA:1.10.287.950 186 517 1.5E-70 T 17-10-2018 FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 SMART SM00283 255 516 2.9E-78 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 SUPERFAMILY SSF58104 208 515 6.15E-75 T 17-10-2018 FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 301 483 3.6E-44 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 SUPERFAMILY SSF103190 3 78 3.66E-16 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_0692 42d9e2a7cd1dd204cac0566222653b66 517 Gene3D G3DSA:3.30.450.20 2 67 7.7E-60 T 17-10-2018 FORC55_2339 e8d61da63a7e8d73af1b7d48496962b4 375 Pfam PF11873 Domain of unknown function (DUF3393) 4 206 2.3E-78 T 17-10-2018 IPR024570 Murein transglycosylase-C, N-terminal FORC55_2339 e8d61da63a7e8d73af1b7d48496962b4 375 Pfam PF01464 Transglycosylase SLT domain 211 334 1.5E-28 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 FORC55_2339 e8d61da63a7e8d73af1b7d48496962b4 375 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 17-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 FORC55_2339 e8d61da63a7e8d73af1b7d48496962b4 375 Gene3D G3DSA:1.10.530.10 194 370 7.1E-49 T 17-10-2018 FORC55_2339 e8d61da63a7e8d73af1b7d48496962b4 375 SUPERFAMILY SSF53955 206 370 1.69E-35 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 SUPERFAMILY SSF103190 19 149 4.19E-34 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 SMART SM00091 195 263 2.5E-4 T 17-10-2018 IPR000014 PAS domain FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 519 4.1E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 Gene3D G3DSA:3.30.565.10 354 519 2.6E-26 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 313 361 7.3E-7 T 17-10-2018 IPR039506 SpoOB, alpha-helical domain FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 Pfam PF17203 Single cache domain 3 20 149 6.1E-21 T 17-10-2018 IPR033463 Single cache domain 3 FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 SUPERFAMILY SSF55874 386 518 3.8E-27 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 Gene3D G3DSA:3.30.450.20 182 303 1.6E-16 T 17-10-2018 FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 Gene3D G3DSA:3.30.450.20 13 146 2.7E-40 T 17-10-2018 FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 SMART SM00387 410 521 4.5E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 SUPERFAMILY SSF55785 189 301 2.28E-8 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 2.3E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 2.3E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 2.3E-10 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1956 2dd202e7a505711fa176a2e5d5a6a6cc 536 SUPERFAMILY SSF55890 318 401 9.94E-9 T 17-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 FORC55_2955 dd040b0d137b3a373106cea33bcbcf03 224 SUPERFAMILY SSF52172 1 118 1.85E-37 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2955 dd040b0d137b3a373106cea33bcbcf03 224 Gene3D G3DSA:3.40.50.2300 1 121 6.1E-39 T 17-10-2018 FORC55_2955 dd040b0d137b3a373106cea33bcbcf03 224 SUPERFAMILY SSF46894 122 221 3.4E-28 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_2955 dd040b0d137b3a373106cea33bcbcf03 224 SMART SM00862 146 221 2.1E-24 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_2955 dd040b0d137b3a373106cea33bcbcf03 224 Pfam PF00072 Response regulator receiver domain 3 113 1.0E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2955 dd040b0d137b3a373106cea33bcbcf03 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 2.7E-24 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_2955 dd040b0d137b3a373106cea33bcbcf03 224 SMART SM00448 1 112 1.2E-37 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2955 dd040b0d137b3a373106cea33bcbcf03 224 Gene3D G3DSA:1.10.10.10 123 224 8.9E-30 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1547 10808b977d27643e7054c860d0053341 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 251 45.293 T 17-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 FORC55_1547 10808b977d27643e7054c860d0053341 251 SMART SM00382 22 213 1.7E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1547 10808b977d27643e7054c860d0053341 251 SUPERFAMILY SSF52540 16 231 4.99E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1547 10808b977d27643e7054c860d0053341 251 Pfam PF00005 ABC transporter 15 164 2.5E-22 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1547 10808b977d27643e7054c860d0053341 251 Gene3D G3DSA:3.40.50.300 3 250 7.3E-59 T 17-10-2018 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 Gene3D G3DSA:1.10.579.10 291 469 2.3E-81 T 17-10-2018 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 Pfam PF03441 FAD binding domain of DNA photolyase 273 465 2.1E-83 T 17-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 Gene3D G3DSA:3.40.50.620 3 202 5.5E-77 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 PRINTS PR00147 DNA photolyase signature 343 361 1.2E-29 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 PRINTS PR00147 DNA photolyase signature 142 158 1.2E-29 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 PRINTS PR00147 DNA photolyase signature 323 339 1.2E-29 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 PRINTS PR00147 DNA photolyase signature 382 396 1.2E-29 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 17-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 Pfam PF00875 DNA photolyase 3 164 6.0E-47 T 17-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 SUPERFAMILY SSF52425 2 177 3.92E-50 T 17-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 17-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 Gene3D G3DSA:1.25.40.80 133 284 5.5E-77 T 17-10-2018 FORC55_2739 d9722fb187afcecf0b9773cb95b6ea1b 469 SUPERFAMILY SSF48173 190 468 2.35E-108 T 17-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 FORC55_1689 daa363aab607aaf226ccd9f0ebede8f2 323 Pfam PF00005 ABC transporter 24 180 1.9E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1689 daa363aab607aaf226ccd9f0ebede8f2 323 SUPERFAMILY SSF52540 31 301 6.66E-70 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1689 daa363aab607aaf226ccd9f0ebede8f2 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.6E-18 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_1689 daa363aab607aaf226ccd9f0ebede8f2 323 Gene3D G3DSA:3.40.50.300 1 321 2.1E-96 T 17-10-2018 FORC55_1689 daa363aab607aaf226ccd9f0ebede8f2 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 3.0E-23 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_1689 daa363aab607aaf226ccd9f0ebede8f2 323 SMART SM00382 32 238 5.2E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1689 daa363aab607aaf226ccd9f0ebede8f2 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2697 59273242477d36c65991e424f3e0103f 291 Gene3D G3DSA:1.10.1040.10 163 291 1.8E-34 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 FORC55_2697 59273242477d36c65991e424f3e0103f 291 PIRSF PIRSF000103 1 291 2.5E-72 T 17-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 FORC55_2697 59273242477d36c65991e424f3e0103f 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 1.2E-29 T 17-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 FORC55_2697 59273242477d36c65991e424f3e0103f 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 17-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 FORC55_2697 59273242477d36c65991e424f3e0103f 291 SUPERFAMILY SSF48179 164 289 3.4E-36 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_2697 59273242477d36c65991e424f3e0103f 291 Gene3D G3DSA:3.40.50.720 1 162 1.1E-50 T 17-10-2018 FORC55_2697 59273242477d36c65991e424f3e0103f 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 8.7E-49 T 17-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 FORC55_2697 59273242477d36c65991e424f3e0103f 291 SUPERFAMILY SSF51735 1 163 5.07E-52 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 Pfam PF07549 SecD/SecF GG Motif 30 47 1.3E-5 T 17-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 SUPERFAMILY SSF82866 102 284 3.14E-35 T 17-10-2018 FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 68 274 5.0E-49 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 3.4E-25 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 3.4E-25 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 3.4E-25 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 3.4E-25 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 Gene3D G3DSA:1.20.1640.10 95 289 1.0E-9 T 17-10-2018 FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.6E-64 T 17-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 287 21.79 T 17-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 FORC55_3333 bac8bffc884c399619fb1760d83e2bb3 300 Pfam PF02355 Protein export membrane protein 101 283 1.7E-55 T 17-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial FORC55_1860 8dedef6a41b32170e6166670d6a0b8a9 474 SUPERFAMILY SSF55604 10 82 5.62E-20 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_1860 8dedef6a41b32170e6166670d6a0b8a9 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 3.6E-34 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_1860 8dedef6a41b32170e6166670d6a0b8a9 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 7.5E-13 T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_1860 8dedef6a41b32170e6166670d6a0b8a9 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.2E-14 T 17-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 FORC55_1860 8dedef6a41b32170e6166670d6a0b8a9 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 461 9.4E-205 T 17-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 FORC55_1860 8dedef6a41b32170e6166670d6a0b8a9 474 Gene3D G3DSA:3.30.1360.60 2 78 1.1E-22 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_1860 8dedef6a41b32170e6166670d6a0b8a9 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_0635 f8a2817ba8a5708798458adb80da506d 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 314 471 1.6E-45 T 17-10-2018 IPR000160 GGDEF domain FORC55_0635 f8a2817ba8a5708798458adb80da506d 473 SUPERFAMILY SSF55073 323 471 4.16E-45 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0635 f8a2817ba8a5708798458adb80da506d 473 SMART SM00267 307 473 1.9E-52 T 17-10-2018 IPR000160 GGDEF domain FORC55_0635 f8a2817ba8a5708798458adb80da506d 473 Pfam PF02743 Cache domain 40 270 8.9E-15 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_0635 f8a2817ba8a5708798458adb80da506d 473 Gene3D G3DSA:3.30.450.20 151 284 2.7E-7 T 17-10-2018 FORC55_0635 f8a2817ba8a5708798458adb80da506d 473 Gene3D G3DSA:3.30.70.270 308 472 4.6E-54 T 17-10-2018 FORC55_0635 f8a2817ba8a5708798458adb80da506d 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 469 1.5E-42 T 17-10-2018 IPR000160 GGDEF domain FORC55_2965 291e5efcb5636cf963102f122348d134 177 SUPERFAMILY SSF81342 2 175 1.26E-29 T 17-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 FORC55_2965 291e5efcb5636cf963102f122348d134 177 Pfam PF01292 Prokaryotic cytochrome b561 7 175 1.3E-22 T 17-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 FORC55_1443 89e21d11dd9ebef227244b1dfe13de0d 157 SUPERFAMILY SSF52833 1 156 5.47E-37 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_1443 89e21d11dd9ebef227244b1dfe13de0d 157 Pfam PF08534 Redoxin 5 154 1.4E-39 T 17-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 FORC55_1443 89e21d11dd9ebef227244b1dfe13de0d 157 Gene3D G3DSA:3.40.30.10 2 157 1.0E-60 T 17-10-2018 FORC55_1445 30eced407889e18b001f528db7740294 162 Pfam PF08448 PAS fold 36 146 3.1E-12 T 17-10-2018 IPR013656 PAS fold-4 FORC55_1445 30eced407889e18b001f528db7740294 162 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 33 151 9.8E-16 T 17-10-2018 IPR000014 PAS domain FORC55_1445 30eced407889e18b001f528db7740294 162 Gene3D G3DSA:3.30.450.20 14 157 2.7E-21 T 17-10-2018 FORC55_1445 30eced407889e18b001f528db7740294 162 SUPERFAMILY SSF55785 35 147 6.81E-18 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1445 30eced407889e18b001f528db7740294 162 SMART SM00091 30 96 3.0E-7 T 17-10-2018 IPR000014 PAS domain FORC55_3254 5fa7eac6d884366afdf4e60be6487e6d 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 195 6.5E-8 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3254 5fa7eac6d884366afdf4e60be6487e6d 224 Gene3D G3DSA:3.40.50.1000 5 218 1.8E-64 T 17-10-2018 IPR023214 HAD superfamily FORC55_3254 5fa7eac6d884366afdf4e60be6487e6d 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 4.5E-102 T 17-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 FORC55_3254 5fa7eac6d884366afdf4e60be6487e6d 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 1.7E-23 T 17-10-2018 FORC55_3254 5fa7eac6d884366afdf4e60be6487e6d 224 Gene3D G3DSA:1.10.150.240 16 95 1.8E-64 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 FORC55_3254 5fa7eac6d884366afdf4e60be6487e6d 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 7.4E-17 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3254 5fa7eac6d884366afdf4e60be6487e6d 224 SUPERFAMILY SSF56784 2 222 5.28E-51 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 306 1.9E-104 T 17-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 170 306 1.1E-19 T 17-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 SMART SM00047 149 310 4.0E-76 T 17-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 Gene3D G3DSA:1.10.530.10 164 302 3.1E-45 T 17-10-2018 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.5E-29 T 17-10-2018 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 159 182 1.5E-29 T 17-10-2018 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 246 267 1.5E-29 T 17-10-2018 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.5E-29 T 17-10-2018 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 224 245 1.5E-29 T 17-10-2018 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 289 307 1.5E-29 T 17-10-2018 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 183 201 1.5E-29 T 17-10-2018 FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 Pfam PF10135 Rod binding protein 53 102 1.2E-14 T 17-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal FORC55_0664 1a04e880d251ba4d3feb805b0df9df35 312 Gene3D G3DSA:2.10.70.40 198 249 3.1E-45 T 17-10-2018 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 2.0E-14 T 17-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.687 T 17-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 SUPERFAMILY SSF81301 1 119 7.08E-30 T 17-10-2018 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 Gene3D G3DSA:3.30.460.10 1 121 1.4E-27 T 17-10-2018 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 Pfam PF01966 HD domain 229 326 9.0E-9 T 17-10-2018 IPR006674 HD domain FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 SUPERFAMILY SSF81891 120 359 6.8E-55 T 17-10-2018 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 PIRSF PIRSF000813 1 403 1.0E-200 T 17-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 403 52.423 T 17-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 Pfam PF01743 Poly A polymerase head domain 3 122 4.2E-17 T 17-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 FORC55_0429 672dce42306fcc3d18789923fb674cb0 403 Gene3D G3DSA:1.10.3090.10 122 402 8.0E-44 T 17-10-2018 FORC55_2380 8c1852560d8d468c0f4269c6fee7e548 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.5E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2380 8c1852560d8d468c0f4269c6fee7e548 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.1E-9 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2380 8c1852560d8d468c0f4269c6fee7e548 158 Gene3D G3DSA:3.30.700.10 7 158 1.6E-15 T 17-10-2018 FORC55_2380 8c1852560d8d468c0f4269c6fee7e548 158 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2380 8c1852560d8d468c0f4269c6fee7e548 158 SUPERFAMILY SSF54523 7 126 7.85E-14 T 17-10-2018 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 370 8.9E-25 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 1.1E-20 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 SUPERFAMILY SSF52540 137 467 5.95E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 SUPERFAMILY SSF52540 4 167 2.47E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.5E-10 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 5.5E-10 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 Hamap MF_00195 GTPase Der [der]. 2 464 39.093 T 17-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 Pfam PF01926 50S ribosome-binding GTPase 208 325 2.1E-24 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.4E-27 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 381 460 1.1E-25 T 17-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 SMART SM00382 204 347 0.44 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 SMART SM00382 1 138 2.9 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 PIRSF PIRSF006485 1 469 2.6E-181 T 17-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 Gene3D G3DSA:3.40.50.300 2 160 9.9E-43 T 17-10-2018 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 Gene3D G3DSA:3.40.50.300 201 378 2.9E-48 T 17-10-2018 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 461 8.1E-181 T 17-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 FORC55_1980 5442ffb2e381e30ae7ff4850759707d5 494 Gene3D G3DSA:3.30.300.20 381 463 5.1E-20 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 Pfam PF00072 Response regulator receiver domain 4 114 1.0E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 SUPERFAMILY SSF46689 390 440 1.03E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 SUPERFAMILY SSF52540 144 374 3.98E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 Gene3D G3DSA:3.40.50.300 140 314 3.4E-61 T 17-10-2018 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 Pfam PF00158 Sigma-54 interaction domain 144 310 6.6E-70 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 Gene3D G3DSA:1.10.8.60 315 388 2.9E-20 T 17-10-2018 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 Gene3D G3DSA:3.40.50.2300 2 129 5.0E-34 T 17-10-2018 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 Gene3D G3DSA:1.10.10.60 389 443 5.4E-12 T 17-10-2018 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 SMART SM00382 164 308 2.7E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 SMART SM00448 2 114 2.1E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 SUPERFAMILY SSF52172 2 188 1.17E-36 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0902 fba68c660fa445af45d7965bde4b9786 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 5.4E-8 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2151 0bd6603b337179276fc874a5039aabbe 291 Pfam PF06586 TraK protein 51 267 1.4E-15 T 17-10-2018 IPR010563 Pilus assembly TraK FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 Gene3D G3DSA:3.30.1340.10 3 86 2.7E-28 T 17-10-2018 IPR035895 HPr-like superfamily FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 3.6E-24 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 SUPERFAMILY SSF55594 5 91 4.58E-25 T 17-10-2018 IPR035895 HPr-like superfamily FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 3.3E-12 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 3.3E-12 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 3.3E-12 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 17-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 85 2.1E-23 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_0348 9c3d661e9c7b5522cec7609041069c7b 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 17-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site FORC55_2211 43f4935aefc6fea789f1835f4f595add 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2211 43f4935aefc6fea789f1835f4f595add 343 SUPERFAMILY SSF50331 264 342 5.95E-8 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_2211 43f4935aefc6fea789f1835f4f595add 343 Gene3D G3DSA:3.40.50.300 2 240 1.1E-74 T 17-10-2018 FORC55_2211 43f4935aefc6fea789f1835f4f595add 343 Pfam PF08402 TOBE domain 276 342 9.1E-8 T 17-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 FORC55_2211 43f4935aefc6fea789f1835f4f595add 343 SUPERFAMILY SSF52540 5 242 1.13E-79 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2211 43f4935aefc6fea789f1835f4f595add 343 SMART SM00382 29 214 4.0E-19 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2211 43f4935aefc6fea789f1835f4f595add 343 Pfam PF00005 ABC transporter 20 164 8.4E-36 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 5.5E-134 T 17-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 17-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 Pfam PF00764 Arginosuccinate synthase 10 396 6.6E-144 T 17-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 SUPERFAMILY SSF52402 7 170 1.01E-47 T 17-10-2018 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 17-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 52.13 T 17-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 Gene3D G3DSA:3.40.50.620 9 177 9.2E-145 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 SUPERFAMILY SSF69864 177 402 1.16E-84 T 17-10-2018 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 Gene3D G3DSA:1.20.5.470 368 403 7.6E-7 T 17-10-2018 FORC55_0243 9cdd5f105c2005d6960810ac9055222a 404 Gene3D G3DSA:3.90.1260.10 68 354 9.2E-145 T 17-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_2449 e569d0b6e9af34aece442c03f806d824 365 Pfam PF01551 Peptidase family M23 266 359 7.7E-23 T 17-10-2018 IPR016047 Peptidase M23 FORC55_2449 e569d0b6e9af34aece442c03f806d824 365 SUPERFAMILY SSF51261 148 363 2.25E-47 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_2449 e569d0b6e9af34aece442c03f806d824 365 Gene3D G3DSA:2.70.70.10 225 365 4.1E-33 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_3306 b8b5f6e65169c6cbdb5bd055232ba243 157 SUPERFAMILY SSF54534 16 156 3.57E-50 T 17-10-2018 FORC55_3306 b8b5f6e65169c6cbdb5bd055232ba243 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 25 59 2.8E-8 T 17-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 FORC55_3306 b8b5f6e65169c6cbdb5bd055232ba243 157 Gene3D G3DSA:3.10.50.40 21 157 5.8E-52 T 17-10-2018 FORC55_3306 b8b5f6e65169c6cbdb5bd055232ba243 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 6.5E-28 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain FORC55_3653 2c02bcab93359fc49a642d860e4570c5 605 Pfam PF08308 PEGA domain 296 362 5.6E-24 T 17-10-2018 IPR013229 PEGA FORC55_3653 2c02bcab93359fc49a642d860e4570c5 605 Pfam PF03781 Sulfatase-modifying factor enzyme 1 382 603 2.5E-56 T 17-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 FORC55_3653 2c02bcab93359fc49a642d860e4570c5 605 SUPERFAMILY SSF56436 383 604 8.48E-54 T 17-10-2018 IPR016187 C-type lectin fold FORC55_3653 2c02bcab93359fc49a642d860e4570c5 605 Gene3D G3DSA:3.90.1580.10 383 604 1.5E-54 T 17-10-2018 FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 Gene3D G3DSA:3.40.50.720 1 240 7.6E-73 T 17-10-2018 FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0037 T 17-10-2018 FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 237 3.7E-56 T 17-10-2018 FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 236 1.1E-117 T 17-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.4E-45 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.4E-45 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.4E-45 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.4E-45 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-45 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.4E-45 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.8E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.8E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.8E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3332 5036c8630b80638fb105e2ce5a0d3c8d 245 SUPERFAMILY SSF51735 3 238 3.14E-75 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1916 12f56134a21660b850687014c6587e27 412 Gene3D G3DSA:3.30.160.390 6 95 2.9E-28 T 17-10-2018 IPR038488 Integrase, DNA-binding domain superfamily FORC55_1916 12f56134a21660b850687014c6587e27 412 Pfam PF13356 Arm DNA-binding domain 8 95 6.2E-18 T 17-10-2018 IPR025166 Integrase, DNA-binding domain FORC55_1916 12f56134a21660b850687014c6587e27 412 Gene3D G3DSA:1.10.150.130 97 212 7.1E-31 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal FORC55_1916 12f56134a21660b850687014c6587e27 412 Pfam PF00589 Phage integrase family 214 376 2.1E-27 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 FORC55_1916 12f56134a21660b850687014c6587e27 412 Gene3D G3DSA:1.10.443.10 214 388 2.0E-18 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 FORC55_1916 12f56134a21660b850687014c6587e27 412 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 158 5.6E-5 T 17-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 FORC55_1916 12f56134a21660b850687014c6587e27 412 SUPERFAMILY SSF56349 106 386 4.12E-62 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 FORC55_0768 e7d3c4460f5ea1e36dba1a37d4f5fb31 71 Gene3D G3DSA:2.30.30.90 8 71 7.8E-21 T 17-10-2018 IPR038157 Ferrous iron transporter, core domain FORC55_0768 e7d3c4460f5ea1e36dba1a37d4f5fb31 71 SUPERFAMILY SSF50037 2 69 3.89E-18 T 17-10-2018 IPR008988 Transcriptional repressor, C-terminal FORC55_0768 e7d3c4460f5ea1e36dba1a37d4f5fb31 71 SMART SM00899 1 69 7.3E-15 T 17-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 FORC55_0768 e7d3c4460f5ea1e36dba1a37d4f5fb31 71 Pfam PF04023 FeoA domain 1 69 1.6E-14 T 17-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 FORC55_3120 5aaea41ca15fd9ea868e61eb484050d8 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 150 1.2E-9 T 17-10-2018 IPR000182 GNAT domain FORC55_3120 5aaea41ca15fd9ea868e61eb484050d8 165 SUPERFAMILY SSF55729 8 145 1.04E-13 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3120 5aaea41ca15fd9ea868e61eb484050d8 165 Gene3D G3DSA:3.40.630.30 1 159 2.5E-44 T 17-10-2018 FORC55_3075 5aaea41ca15fd9ea868e61eb484050d8 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 150 1.2E-9 T 17-10-2018 IPR000182 GNAT domain FORC55_3075 5aaea41ca15fd9ea868e61eb484050d8 165 SUPERFAMILY SSF55729 8 145 1.04E-13 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3075 5aaea41ca15fd9ea868e61eb484050d8 165 Gene3D G3DSA:3.40.630.30 1 159 2.5E-44 T 17-10-2018 FORC55_3071 5aaea41ca15fd9ea868e61eb484050d8 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 150 1.2E-9 T 17-10-2018 IPR000182 GNAT domain FORC55_3071 5aaea41ca15fd9ea868e61eb484050d8 165 SUPERFAMILY SSF55729 8 145 1.04E-13 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3071 5aaea41ca15fd9ea868e61eb484050d8 165 Gene3D G3DSA:3.40.630.30 1 159 2.5E-44 T 17-10-2018 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 Gene3D G3DSA:3.40.1190.10 81 312 3.3E-77 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 6.1E-148 T 17-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 393 2.6E-10 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 Gene3D G3DSA:3.90.190.20 313 453 4.1E-35 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 SUPERFAMILY SSF53244 314 448 1.13E-32 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 SUPERFAMILY SSF63418 1 95 1.28E-24 T 17-10-2018 IPR035911 MurE/MurF, N-terminal FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 Pfam PF01225 Mur ligase family, catalytic domain 24 79 2.5E-8 T 17-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 Gene3D G3DSA:3.40.1390.10 1 80 2.9E-25 T 17-10-2018 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 Pfam PF08245 Mur ligase middle domain 105 293 1.1E-46 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 32.981 T 17-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_0468 c4b9fefd6ffe97474913f66737ce4cf6 453 SUPERFAMILY SSF53623 100 311 1.7E-54 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0076 472c0468962f1c901328ad03034816f7 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 417 2.6E-78 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_0076 472c0468962f1c901328ad03034816f7 451 Pfam PF01554 MatE 249 399 3.3E-16 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_0076 472c0468962f1c901328ad03034816f7 451 Pfam PF01554 MatE 23 183 6.6E-26 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_1463 4965623c18176c941c8a9310f8fec70b 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 70 320 8.1E-24 T 17-10-2018 IPR005064 Bordetella uptake gene GO:0030288 FORC55_1463 4965623c18176c941c8a9310f8fec70b 323 Gene3D G3DSA:3.40.190.150 29 314 7.9E-63 T 17-10-2018 FORC55_1463 4965623c18176c941c8a9310f8fec70b 323 SUPERFAMILY SSF53850 108 290 2.26E-10 T 17-10-2018 FORC55_1463 4965623c18176c941c8a9310f8fec70b 323 Gene3D G3DSA:3.40.190.10 123 249 7.9E-63 T 17-10-2018 FORC55_1463 4965623c18176c941c8a9310f8fec70b 323 PIRSF PIRSF017082 4 323 1.9E-85 T 17-10-2018 IPR005064 Bordetella uptake gene GO:0030288 FORC55_2246 0e35b50f6fd164376810411c48719004 142 PIRSF PIRSF002181 1 142 1.8E-52 T 17-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 FORC55_2246 0e35b50f6fd164376810411c48719004 142 Pfam PF00572 Ribosomal protein L13 15 138 2.0E-57 T 17-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 FORC55_2246 0e35b50f6fd164376810411c48719004 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.6E-65 T 17-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2246 0e35b50f6fd164376810411c48719004 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 17-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 FORC55_2246 0e35b50f6fd164376810411c48719004 142 SUPERFAMILY SSF52161 1 140 7.85E-61 T 17-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_2246 0e35b50f6fd164376810411c48719004 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.831 T 17-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 FORC55_2246 0e35b50f6fd164376810411c48719004 142 Gene3D G3DSA:3.90.1180.10 1 142 3.4E-64 T 17-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_2760 4b08d9b7a759dedf00df557e96c5a391 295 Gene3D G3DSA:3.40.190.10 164 261 6.1E-45 T 17-10-2018 FORC55_2760 4b08d9b7a759dedf00df557e96c5a391 295 SUPERFAMILY SSF46785 8 88 2.18E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2760 4b08d9b7a759dedf00df557e96c5a391 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.0E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2760 4b08d9b7a759dedf00df557e96c5a391 295 Gene3D G3DSA:3.40.190.10 92 286 6.1E-45 T 17-10-2018 FORC55_2760 4b08d9b7a759dedf00df557e96c5a391 295 SUPERFAMILY SSF53850 90 290 5.91E-35 T 17-10-2018 FORC55_2760 4b08d9b7a759dedf00df557e96c5a391 295 Pfam PF03466 LysR substrate binding domain 88 289 1.7E-34 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2760 4b08d9b7a759dedf00df557e96c5a391 295 Gene3D G3DSA:1.10.10.10 3 91 6.0E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3043 2cf71b68e514d4f380fdbb3a91dc9c5e 203 Pfam PF06042 Nucleotidyltransferase 45 201 7.4E-58 T 17-10-2018 IPR009267 Putative nucleotidyltransferase FORC55_1996 9331bb11bfa28b7fc1dd55914dea8671 188 Gene3D G3DSA:1.10.10.10 16 159 2.3E-53 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1996 9331bb11bfa28b7fc1dd55914dea8671 188 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 16 188 49.376 T 17-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 FORC55_1996 9331bb11bfa28b7fc1dd55914dea8671 188 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 64 82 - T 17-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site FORC55_1996 9331bb11bfa28b7fc1dd55914dea8671 188 SUPERFAMILY SSF46785 17 147 2.26E-35 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1996 9331bb11bfa28b7fc1dd55914dea8671 188 Pfam PF02082 Transcriptional regulator 16 98 3.7E-27 T 17-10-2018 IPR000944 Transcription regulator Rrf2-type FORC55_1996 9331bb11bfa28b7fc1dd55914dea8671 188 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 16 145 1.6E-46 T 17-10-2018 IPR000944 Transcription regulator Rrf2-type FORC55_1996 9331bb11bfa28b7fc1dd55914dea8671 188 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 16 149 4.5E-65 T 17-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 FORC55_2571 d91460ad09f2110f13f45800657edae5 214 Pfam PF00156 Phosphoribosyl transferase domain 44 162 5.2E-13 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 FORC55_2571 d91460ad09f2110f13f45800657edae5 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 36.465 T 17-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_2571 d91460ad09f2110f13f45800657edae5 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 188 3.7E-70 T 17-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_2571 d91460ad09f2110f13f45800657edae5 214 Gene3D G3DSA:3.40.50.2020 2 214 7.4E-80 T 17-10-2018 FORC55_2571 d91460ad09f2110f13f45800657edae5 214 SUPERFAMILY SSF53271 3 212 1.7E-49 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 Gene3D G3DSA:1.20.1640.10 423 607 2.6E-7 T 17-10-2018 FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 Gene3D G3DSA:3.30.70.3400 214 292 1.3E-16 T 17-10-2018 FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 Pfam PF02355 Protein export membrane protein 430 599 5.9E-18 T 17-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 3.4E-129 T 17-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 SUPERFAMILY SSF82866 407 604 1.44E-41 T 17-10-2018 FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 Pfam PF07549 SecD/SecF GG Motif 127 151 1.4E-4 T 17-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.268 T 17-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 Pfam PF13721 SecD export protein N-terminal TM region 14 109 3.7E-22 T 17-10-2018 IPR027398 SecD export protein N-terminal TM domain FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 7.3E-74 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_3334 207c2bac3fe36c6aa99197994f0df065 612 Gene3D G3DSA:3.30.1360.200 293 422 1.6E-23 T 17-10-2018 FORC55_0081 395cc46f02cd3d1c985a109e778fd47a 179 Pfam PF04345 Chorismate lyase 11 179 3.4E-78 T 17-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 FORC55_0081 395cc46f02cd3d1c985a109e778fd47a 179 Gene3D G3DSA:3.40.1410.10 9 174 7.4E-38 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily FORC55_0081 395cc46f02cd3d1c985a109e778fd47a 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.204 T 17-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 FORC55_0081 395cc46f02cd3d1c985a109e778fd47a 179 SUPERFAMILY SSF64288 8 174 2.88E-45 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily FORC55_1562 ede45b8af68adf53b5116b77a2f64f90 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.5E-77 T 17-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 FORC55_1562 ede45b8af68adf53b5116b77a2f64f90 218 PIRSF PIRSF023956 1 218 7.2E-77 T 17-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 FORC55_1562 ede45b8af68adf53b5116b77a2f64f90 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 216 1.2E-81 T 17-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 FORC55_1562 ede45b8af68adf53b5116b77a2f64f90 218 Gene3D G3DSA:3.40.50.150 1 217 9.8E-61 T 17-10-2018 FORC55_1562 ede45b8af68adf53b5116b77a2f64f90 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 216 35.255 T 17-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 FORC55_1562 ede45b8af68adf53b5116b77a2f64f90 218 SUPERFAMILY SSF53335 3 214 3.19E-56 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 SUPERFAMILY SSF118215 29 441 5.62E-92 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 Pfam PF00375 Sodium:dicarboxylate symporter family 30 441 1.4E-100 T 17-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.9E-28 T 17-10-2018 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.9E-28 T 17-10-2018 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.9E-28 T 17-10-2018 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.9E-28 T 17-10-2018 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.9E-28 T 17-10-2018 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.9E-28 T 17-10-2018 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.9E-28 T 17-10-2018 FORC55_1555 deae7b5d966a158ae32f11b05ca459fc 457 Gene3D G3DSA:1.10.3860.10 21 456 7.5E-101 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 FORC55_0305 90365e36d6492479be76ae081424fd93 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 17-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site FORC55_0305 90365e36d6492479be76ae081424fd93 167 Gene3D G3DSA:3.30.230.10 75 167 5.2E-36 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0305 90365e36d6492479be76ae081424fd93 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.523 T 17-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 FORC55_0305 90365e36d6492479be76ae081424fd93 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 9.5E-69 T 17-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 FORC55_0305 90365e36d6492479be76ae081424fd93 167 Gene3D G3DSA:3.30.160.20 2 74 2.0E-31 T 17-10-2018 FORC55_0305 90365e36d6492479be76ae081424fd93 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.9E-29 T 17-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 FORC55_0305 90365e36d6492479be76ae081424fd93 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 7.3E-29 T 17-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 FORC55_0305 90365e36d6492479be76ae081424fd93 167 SUPERFAMILY SSF54211 80 159 6.57E-27 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0305 90365e36d6492479be76ae081424fd93 167 SUPERFAMILY SSF54768 8 76 1.36E-23 T 17-10-2018 FORC55_0801 c0fd96101373153a6b0c56b916aab007 110 Pfam PF00462 Glutaredoxin 16 80 2.7E-16 T 17-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 FORC55_0801 c0fd96101373153a6b0c56b916aab007 110 PIRSF PIRSF005894 1 107 1.4E-51 T 17-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 FORC55_0801 c0fd96101373153a6b0c56b916aab007 110 Gene3D G3DSA:3.40.30.10 2 106 3.6E-30 T 17-10-2018 FORC55_0801 c0fd96101373153a6b0c56b916aab007 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.1E-46 T 17-10-2018 IPR004480 Monothiol glutaredoxin-related FORC55_0801 c0fd96101373153a6b0c56b916aab007 110 SUPERFAMILY SSF52833 1 104 3.57E-33 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0218 32e667b634fa9de466a85cacc219b307 460 Pfam PF01554 MatE 257 418 1.9E-19 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_0218 32e667b634fa9de466a85cacc219b307 460 Pfam PF01554 MatE 34 193 4.1E-26 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_0218 32e667b634fa9de466a85cacc219b307 460 PIRSF PIRSF006603 10 456 1.7E-125 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_0218 32e667b634fa9de466a85cacc219b307 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 34 423 2.0E-58 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_0346 f9484442bc5e4186a8d543b749f5346c 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 1.7E-57 T 17-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 FORC55_0346 f9484442bc5e4186a8d543b749f5346c 447 SUPERFAMILY SSF111283 12 447 8.76E-125 T 17-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 FORC55_0346 f9484442bc5e4186a8d543b749f5346c 447 Gene3D G3DSA:3.30.2290.10 7 233 1.1E-82 T 17-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Gene3D G3DSA:3.40.50.300 561 772 6.5E-62 T 17-10-2018 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Gene3D G3DSA:3.40.50.300 366 555 8.4E-46 T 17-10-2018 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 675 3.3E-28 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 630 3.3E-28 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 686 704 3.3E-28 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 719 733 3.3E-28 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 SUPERFAMILY SSF52540 180 555 1.2E-69 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 SMART SM00382 608 756 1.4E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 SMART SM00382 216 359 1.4E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Gene3D G3DSA:1.10.1780.10 5 159 1.5E-38 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 642 660 - T 17-10-2018 IPR028299 ClpA/B, conserved site 2 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 312 324 - T 17-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 858 0.0 T 17-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 SUPERFAMILY SSF52540 557 836 3.56E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 SMART SM01086 774 864 7.1E-10 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 352 6.2E-10 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Gene3D G3DSA:3.40.50.300 177 365 5.9E-59 T 17-10-2018 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 SUPERFAMILY SSF81923 12 127 7.98E-14 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 71 3.2E-6 T 17-10-2018 IPR004176 Clp, N-terminal FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Pfam PF07724 AAA domain (Cdc48 subfamily) 607 768 3.7E-37 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Gene3D G3DSA:1.10.8.60 774 868 2.0E-9 T 17-10-2018 FORC55_2792 917e73e8ae1d5bc552432cb182d3cb78 869 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 774 847 1.7E-11 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 SUPERFAMILY SSF141868 418 671 7.72E-88 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 Gene3D G3DSA:3.30.70.270 236 414 3.3E-58 T 17-10-2018 FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 SMART SM00052 412 660 2.5E-105 T 17-10-2018 IPR001633 EAL domain FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 Gene3D G3DSA:3.20.20.450 415 676 1.0E-96 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 Pfam PF00563 EAL domain 420 655 6.0E-74 T 17-10-2018 IPR001633 EAL domain FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 SMART SM00267 231 402 3.2E-59 T 17-10-2018 IPR000160 GGDEF domain FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 4.9E-45 T 17-10-2018 IPR000160 GGDEF domain FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 SUPERFAMILY SSF55073 247 404 1.65E-47 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2164 61320d2efafccdf9fc6802a2d17cfced 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 1.6E-38 T 17-10-2018 IPR000160 GGDEF domain FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 SUPERFAMILY SSF52540 4 225 8.95E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 SUPERFAMILY SSF52540 260 479 1.41E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 Gene3D G3DSA:3.40.50.300 1 236 4.1E-57 T 17-10-2018 FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 Gene3D G3DSA:3.40.50.300 242 492 1.5E-41 T 17-10-2018 FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 Pfam PF00005 ABC transporter 270 424 6.4E-21 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 SMART SM00382 29 216 1.5E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 SMART SM00382 279 472 0.0016 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0173 3f2451d9847e4775a109a5b62e1b4436 493 Pfam PF00005 ABC transporter 20 169 2.2E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0145 26f1db62b9b00c4373dfb4bbcbed2f49 144 Gene3D G3DSA:3.50.80.10 1 144 5.6E-53 T 17-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily FORC55_0145 26f1db62b9b00c4373dfb4bbcbed2f49 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.15 T 17-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 FORC55_0145 26f1db62b9b00c4373dfb4bbcbed2f49 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 143 9.1E-62 T 17-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 FORC55_0145 26f1db62b9b00c4373dfb4bbcbed2f49 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 4.1E-51 T 17-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 FORC55_0145 26f1db62b9b00c4373dfb4bbcbed2f49 144 SUPERFAMILY SSF69500 2 143 9.55E-53 T 17-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily FORC55_3251 d14cfe990d08c16c1dd4dfac52d3e021 597 Pfam PF00128 Alpha amylase, catalytic domain 195 497 2.1E-82 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_3251 d14cfe990d08c16c1dd4dfac52d3e021 597 SUPERFAMILY SSF81296 2 116 8.54E-16 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_3251 d14cfe990d08c16c1dd4dfac52d3e021 597 Gene3D G3DSA:2.60.40.10 2 148 7.8E-34 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_3251 d14cfe990d08c16c1dd4dfac52d3e021 597 Gene3D G3DSA:3.20.20.80 157 531 2.9E-147 T 17-10-2018 FORC55_3251 d14cfe990d08c16c1dd4dfac52d3e021 597 SMART SM00642 162 530 2.5E-124 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_3251 d14cfe990d08c16c1dd4dfac52d3e021 597 SUPERFAMILY SSF51445 81 534 1.73E-122 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_3251 d14cfe990d08c16c1dd4dfac52d3e021 597 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 2 144 2.8E-24 T 17-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 FORC55_3251 d14cfe990d08c16c1dd4dfac52d3e021 597 Gene3D G3DSA:3.90.400.10 268 329 2.9E-147 T 17-10-2018 FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 SUPERFAMILY SSF54631 144 275 5.36E-17 T 17-10-2018 FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 SMART SM00116 229 276 0.47 T 17-10-2018 IPR000644 CBS domain FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 SMART SM00116 155 212 14.0 T 17-10-2018 IPR000644 CBS domain FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 SUPERFAMILY SSF51206 8 128 1.44E-16 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 Pfam PF00571 CBS domain 222 275 0.0013 T 17-10-2018 IPR000644 CBS domain FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 603 7.8E-41 T 17-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 Gene3D G3DSA:2.60.120.10 5 136 8.0E-13 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 Gene3D G3DSA:3.10.580.10 137 288 9.2E-19 T 17-10-2018 FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 7.8E-11 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_2479 4da8701aede4a2ce8e1533f10a015387 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 431 8.9E-42 T 17-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 FORC55_3153 f37d95629c18cea84a450975cf1d70a5 227 Pfam PF05618 Putative ATP-dependant zinc protease 88 222 1.4E-48 T 17-10-2018 FORC55_3153 f37d95629c18cea84a450975cf1d70a5 227 Gene3D G3DSA:2.40.70.10 85 212 3.6E-40 T 17-10-2018 IPR021109 Aspartic peptidase domain superfamily FORC55_3153 f37d95629c18cea84a450975cf1d70a5 227 SUPERFAMILY SSF50630 88 219 5.31E-41 T 17-10-2018 IPR021109 Aspartic peptidase domain superfamily FORC55_1275 99e0bbae82ce433438eec49b47140643 369 Pfam PF00005 ABC transporter 19 160 1.0E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1275 99e0bbae82ce433438eec49b47140643 369 Gene3D G3DSA:3.40.50.300 1 220 1.4E-65 T 17-10-2018 FORC55_1275 99e0bbae82ce433438eec49b47140643 369 SMART SM00382 27 210 8.6E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1275 99e0bbae82ce433438eec49b47140643 369 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1275 99e0bbae82ce433438eec49b47140643 369 Gene3D G3DSA:2.40.50.940 221 347 1.7E-28 T 17-10-2018 FORC55_1275 99e0bbae82ce433438eec49b47140643 369 SUPERFAMILY SSF50331 235 355 1.05E-20 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_1275 99e0bbae82ce433438eec49b47140643 369 Gene3D G3DSA:2.40.50.140 279 338 1.7E-28 T 17-10-2018 FORC55_1275 99e0bbae82ce433438eec49b47140643 369 SUPERFAMILY SSF52540 1 241 3.73E-84 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0377 c45bbaa121270665bd9fe5a2cbe9bd92 149 Gene3D G3DSA:3.40.50.10110 1 146 4.4E-41 T 17-10-2018 IPR036768 DNA polymerase III subunit chi superfamily FORC55_0377 c45bbaa121270665bd9fe5a2cbe9bd92 149 SUPERFAMILY SSF102400 1 145 2.88E-42 T 17-10-2018 IPR036768 DNA polymerase III subunit chi superfamily FORC55_0377 c45bbaa121270665bd9fe5a2cbe9bd92 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 2.2E-31 T 17-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 FORC55_3204 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 FORC55_3204 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 FORC55_3204 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 FORC55_3204 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 FORC55_0130 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 FORC55_0130 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 FORC55_0130 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 FORC55_0130 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 FORC55_0703 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 FORC55_0703 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 FORC55_0703 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 FORC55_0703 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 SMART SM00640 98 502 1.1E-130 T 17-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 Gene3D G3DSA:2.115.10.20 59 409 4.8E-92 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 SUPERFAMILY SSF49899 400 534 2.53E-21 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 Gene3D G3DSA:2.60.120.560 410 534 3.6E-19 T 17-10-2018 FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 91 512 1.2E-134 T 17-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 415 522 1.8E-15 T 17-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 SUPERFAMILY SSF75005 89 398 1.86E-91 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 98 398 7.7E-91 T 17-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal FORC55_3301 e4b47a583f41d36992e0733371a540fc 548 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 98 111 - T 17-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52467 186 353 7.48E-34 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.970 363 556 2.5E-55 T 17-10-2018 FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 17-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52518 8 178 4.63E-45 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52518 367 556 4.37E-52 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 535 4.0E-39 T 17-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 7.2E-48 T 17-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 2.6E-25 T 17-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.1220 187 357 2.2E-34 T 17-10-2018 FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.970 2 185 3.2E-62 T 17-10-2018 FORC55_1246 15dc7fe370e777ddbdc15f5569cad08a 567 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 10 548 9.1E-279 T 17-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 PRINTS PR00107 Phosphocarrier protein signature 365 382 8.9E-17 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 PRINTS PR00107 Phosphocarrier protein signature 322 338 8.9E-17 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 PRINTS PR00107 Phosphocarrier protein signature 350 365 8.9E-17 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 SUPERFAMILY SSF55804 4 141 9.29E-38 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 SUPERFAMILY SSF55804 145 275 1.26E-17 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 2.0E-30 T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 Gene3D G3DSA:3.30.1340.10 308 393 4.8E-27 T 17-10-2018 IPR035895 HPr-like superfamily FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 351 366 - T 17-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 Gene3D G3DSA:3.40.930.10 1 142 1.1E-38 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 SUPERFAMILY SSF55594 312 399 5.23E-24 T 17-10-2018 IPR035895 HPr-like superfamily FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 313 391 2.0E-22 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 Pfam PF00381 PTS HPr component phosphorylation site 313 391 2.0E-24 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 322 329 - T 17-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site FORC55_3156 9160fd33ade639fda5e8b16265e60c22 400 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_2038 52f2b0536e50c073fc9f3fa02faeb7e2 648 Gene3D G3DSA:1.10.1240.20 408 475 3.6E-20 T 17-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 FORC55_2038 52f2b0536e50c073fc9f3fa02faeb7e2 648 SUPERFAMILY SSF48435 33 481 1.57E-125 T 17-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 FORC55_2038 52f2b0536e50c073fc9f3fa02faeb7e2 648 Pfam PF01464 Transglycosylase SLT domain 492 599 1.9E-30 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 FORC55_2038 52f2b0536e50c073fc9f3fa02faeb7e2 648 Gene3D G3DSA:1.25.20.10 33 393 1.3E-101 T 17-10-2018 FORC55_2038 52f2b0536e50c073fc9f3fa02faeb7e2 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 475 3.7E-22 T 17-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 FORC55_2038 52f2b0536e50c073fc9f3fa02faeb7e2 648 SUPERFAMILY SSF53955 485 642 1.99E-48 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_2038 52f2b0536e50c073fc9f3fa02faeb7e2 648 Gene3D G3DSA:1.10.530.10 477 648 9.2E-51 T 17-10-2018 FORC55_2038 52f2b0536e50c073fc9f3fa02faeb7e2 648 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 505 533 - T 17-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:1.20.58.100 423 538 3.1E-35 T 17-10-2018 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 SUPERFAMILY SSF56425 227 358 2.99E-41 T 17-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.7E-38 T 17-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.4E-236 T 17-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:3.90.700.10 237 363 2.2E-160 T 17-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 PIRSF PIRSF000171 1 573 1.8E-43 T 17-10-2018 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 17-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 SUPERFAMILY SSF46977 444 581 7.59E-44 T 17-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.8E-9 T 17-10-2018 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 5.8E-9 T 17-10-2018 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 17-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 Pfam PF00890 FAD binding domain 7 397 2.9E-112 T 17-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:3.50.50.60 7 409 2.2E-160 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 17-10-2018 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 17-10-2018 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:4.10.80.40 543 577 2.2E-13 T 17-10-2018 FORC55_0232 8511204cada2eda196c51c2c781e8ea6 602 SUPERFAMILY SSF51905 3 420 7.47E-72 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3446 6b5b6b11e3c5315031ba5539ccc4feac 659 SUPERFAMILY SSF56801 37 649 3.01E-120 T 17-10-2018 FORC55_3446 6b5b6b11e3c5315031ba5539ccc4feac 659 ProSitePatterns PS00455 Putative AMP-binding domain signature. 280 291 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_3446 6b5b6b11e3c5315031ba5539ccc4feac 659 Gene3D G3DSA:3.40.50.12780 81 531 2.2E-54 T 17-10-2018 FORC55_3446 6b5b6b11e3c5315031ba5539ccc4feac 659 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 651 1.2E-235 T 17-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 FORC55_3446 6b5b6b11e3c5315031ba5539ccc4feac 659 Pfam PF00501 AMP-binding enzyme 107 535 2.4E-41 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_3446 6b5b6b11e3c5315031ba5539ccc4feac 659 Pfam PF13193 AMP-binding enzyme C-terminal domain 549 623 1.2E-5 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain FORC55_3446 6b5b6b11e3c5315031ba5539ccc4feac 659 Gene3D G3DSA:3.30.300.30 534 659 2.2E-16 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 SUPERFAMILY SSF52317 3 191 3.4E-47 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 Gene3D G3DSA:3.40.50.880 1 193 2.1E-57 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 3.3E-54 T 17-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 Pfam PF00117 Glutamine amidotransferase class-I 6 186 5.9E-44 T 17-10-2018 IPR017926 Glutamine amidotransferase FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.9E-5 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.9E-5 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.9E-35 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.9E-35 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.9E-35 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.9E-35 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.9E-35 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.9E-35 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 9.5E-14 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 9.5E-14 T 17-10-2018 FORC55_1610 776705772e4e61a97d16dc69018a4b42 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 9.5E-14 T 17-10-2018 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 SUPERFAMILY SSF58104 237 546 7.59E-72 T 17-10-2018 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 Pfam PF17200 Single Cache domain 2 42 189 2.9E-47 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 Gene3D G3DSA:1.10.287.950 215 546 5.3E-70 T 17-10-2018 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 Gene3D G3DSA:3.30.450.20 37 192 3.7E-64 T 17-10-2018 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 Pfam PF00672 HAMP domain 215 266 7.4E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 SMART SM01049 38 132 1.8E-42 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 511 7.3E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 SMART SM00304 215 269 1.4E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2498 b03af9a1fa0450acf5d38a909d7f5d36 546 SMART SM00283 284 545 4.3E-64 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2473 45632df4fadcc93190447d905fbba980 409 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 353 1.6E-23 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2473 45632df4fadcc93190447d905fbba980 409 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 409 247.973 T 17-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 FORC55_2473 45632df4fadcc93190447d905fbba980 409 SMART SM00959 1 37 1.1E-11 T 17-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 FORC55_2473 45632df4fadcc93190447d905fbba980 409 Gene3D G3DSA:1.10.720.10 1 37 6.3E-17 T 17-10-2018 FORC55_2473 45632df4fadcc93190447d905fbba980 409 SMART SM00357 42 108 1.2E-17 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_2473 45632df4fadcc93190447d905fbba980 409 SUPERFAMILY SSF52540 80 361 1.66E-68 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2473 45632df4fadcc93190447d905fbba980 409 Gene3D G3DSA:2.40.50.140 38 107 4.6E-35 T 17-10-2018 FORC55_2473 45632df4fadcc93190447d905fbba980 409 SUPERFAMILY SSF68912 2 36 5.49E-8 T 17-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily FORC55_2473 45632df4fadcc93190447d905fbba980 409 Gene3D G3DSA:3.40.50.300 120 407 2.3E-134 T 17-10-2018 FORC55_2473 45632df4fadcc93190447d905fbba980 409 Pfam PF07498 Rho termination factor, N-terminal domain 1 37 7.9E-15 T 17-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 FORC55_2473 45632df4fadcc93190447d905fbba980 409 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 407 7.4E-218 T 17-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 FORC55_2473 45632df4fadcc93190447d905fbba980 409 Pfam PF07497 Rho termination factor, RNA-binding domain 42 115 5.4E-32 T 17-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 FORC55_2473 45632df4fadcc93190447d905fbba980 409 SUPERFAMILY SSF50249 38 115 4.8E-29 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2473 45632df4fadcc93190447d905fbba980 409 SMART SM00382 160 345 1.0E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0264 3547cc92992859df48574715d22a3e64 470 Gene3D G3DSA:3.40.50.12160 33 161 2.8E-31 T 17-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily FORC55_0264 3547cc92992859df48574715d22a3e64 470 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 34 463 7.8E-111 T 17-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 FORC55_0264 3547cc92992859df48574715d22a3e64 470 Pfam PF00919 Uncharacterized protein family UPF0004 34 121 4.9E-22 T 17-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 FORC55_0264 3547cc92992859df48574715d22a3e64 470 SMART SM00729 165 390 6.3E-57 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_0264 3547cc92992859df48574715d22a3e64 470 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 34 463 1.1E-188 T 17-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 FORC55_0264 3547cc92992859df48574715d22a3e64 470 Gene3D G3DSA:2.40.50.140 405 470 2.4E-24 T 17-10-2018 FORC55_0264 3547cc92992859df48574715d22a3e64 470 Pfam PF04055 Radical SAM superfamily 171 348 8.3E-30 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_0264 3547cc92992859df48574715d22a3e64 470 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 169 189 - T 17-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 FORC55_0264 3547cc92992859df48574715d22a3e64 470 Gene3D G3DSA:3.80.30.20 163 404 2.8E-73 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe FORC55_0264 3547cc92992859df48574715d22a3e64 470 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 33 465 63.258 T 17-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 FORC55_0264 3547cc92992859df48574715d22a3e64 470 SUPERFAMILY SSF102114 131 395 1.12E-52 T 17-10-2018 FORC55_0113 1a3220f6c9e86aeccf45a21853736a0c 408 SUPERFAMILY SSF109604 185 404 7.53E-42 T 17-10-2018 FORC55_0113 1a3220f6c9e86aeccf45a21853736a0c 408 Pfam PF08668 HDOD domain 208 324 3.1E-13 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD FORC55_0113 1a3220f6c9e86aeccf45a21853736a0c 408 Gene3D G3DSA:3.20.20.450 2 203 1.5E-17 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0113 1a3220f6c9e86aeccf45a21853736a0c 408 SUPERFAMILY SSF141868 5 199 1.7E-27 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0113 1a3220f6c9e86aeccf45a21853736a0c 408 Pfam PF00563 EAL domain 74 194 1.7E-13 T 17-10-2018 IPR001633 EAL domain FORC55_0113 1a3220f6c9e86aeccf45a21853736a0c 408 Gene3D G3DSA:1.10.3210.10 204 400 1.8E-22 T 17-10-2018 FORC55_0113 1a3220f6c9e86aeccf45a21853736a0c 408 PIRSF PIRSF003180 1 408 2.8E-179 T 17-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing FORC55_2212 95012cb157240ca7be0ac60a679630b5 541 SUPERFAMILY SSF161098 281 535 2.62E-38 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2212 95012cb157240ca7be0ac60a679630b5 541 Gene3D G3DSA:1.10.3720.10 284 541 8.6E-34 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2212 95012cb157240ca7be0ac60a679630b5 541 Gene3D G3DSA:1.10.3720.10 8 267 7.3E-55 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2212 95012cb157240ca7be0ac60a679630b5 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 347 528 8.0E-8 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2212 95012cb157240ca7be0ac60a679630b5 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 2.6E-14 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2212 95012cb157240ca7be0ac60a679630b5 541 SUPERFAMILY SSF161098 5 255 9.05E-45 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0281 f13d30a3784fa65684c74b5a2d7635ec 326 Pfam PF01112 Asparaginase 6 323 2.4E-110 T 17-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 FORC55_0281 f13d30a3784fa65684c74b5a2d7635ec 326 SUPERFAMILY SSF56235 5 322 1.65E-97 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_0281 f13d30a3784fa65684c74b5a2d7635ec 326 Gene3D G3DSA:3.60.20.30 191 326 7.1E-49 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 SUPERFAMILY SSF82714 704 787 1.16E-16 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.5E-71 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 SUPERFAMILY SSF82866 792 1009 1.12E-48 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 SUPERFAMILY SSF82693 40 134 1.1E-25 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 3.3E-281 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 SUPERFAMILY SSF82693 554 657 1.49E-16 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 SUPERFAMILY SSF82693 139 324 5.75E-19 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 SUPERFAMILY SSF82714 183 266 2.35E-14 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 SUPERFAMILY SSF82866 290 490 2.88E-46 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 17-10-2018 FORC55_1857 3fc2df856231944dfea45afa07a7052e 1036 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_0659 522ba705b84679b2531868fd59ee0578 434 Pfam PF00460 Flagella basal body rod protein 3 32 1.4E-9 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 FORC55_0659 522ba705b84679b2531868fd59ee0578 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 432 5.7E-15 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain FORC55_0659 522ba705b84679b2531868fd59ee0578 434 SUPERFAMILY SSF117143 78 395 3.66E-70 T 17-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like FORC55_0659 522ba705b84679b2531868fd59ee0578 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 6.5E-22 T 17-10-2018 IPR011491 Flagellar hook protein FlgE FORC55_0659 522ba705b84679b2531868fd59ee0578 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 7.8E-92 T 17-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G FORC55_0659 522ba705b84679b2531868fd59ee0578 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 17-10-2018 IPR019776 Flagellar basal body rod protein, conserved site FORC55_0659 522ba705b84679b2531868fd59ee0578 434 Gene3D G3DSA:2.60.98.20 154 315 3.1E-22 T 17-10-2018 IPR037058 Flagellar hook protein FlgE superfamily FORC55_0976 1df662492823bb18af1d9706ac80e690 225 Gene3D G3DSA:1.10.3720.10 1 218 1.7E-50 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0976 1df662492823bb18af1d9706ac80e690 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 9.8E-24 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_0976 1df662492823bb18af1d9706ac80e690 225 SUPERFAMILY SSF161098 11 203 2.62E-42 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0976 1df662492823bb18af1d9706ac80e690 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 217 1.1E-21 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2729 dec6fe3925a070b530a149b0eb49913d 408 Pfam PF03616 Sodium/glutamate symporter 5 376 9.2E-157 T 17-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 FORC55_2729 dec6fe3925a070b530a149b0eb49913d 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.825 T 17-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 FORC55_2729 dec6fe3925a070b530a149b0eb49913d 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 9 407 5.0E-131 T 17-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 Gene3D G3DSA:3.40.50.1220 181 344 4.5E-50 T 17-10-2018 FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 3.4E-47 T 17-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 8.5E-210 T 17-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 Gene3D G3DSA:3.40.50.970 1 176 1.6E-67 T 17-10-2018 FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 SUPERFAMILY SSF52518 1 177 3.21E-61 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 17-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 SUPERFAMILY SSF52467 181 341 4.42E-56 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 Gene3D G3DSA:3.40.50.970 347 548 1.2E-64 T 17-10-2018 FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 SUPERFAMILY SSF52518 358 545 7.51E-64 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 5.9E-56 T 17-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 FORC55_0019 e5d740da85074732b659ea4f28a7220e 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 322 1.0E-39 T 17-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 FORC55_3133 1a31cd19d18c076d5ac7deaad9f2c7aa 119 Gene3D G3DSA:3.10.180.10 6 118 4.5E-20 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_3133 1a31cd19d18c076d5ac7deaad9f2c7aa 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 2.5E-8 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain FORC55_3133 1a31cd19d18c076d5ac7deaad9f2c7aa 119 SUPERFAMILY SSF54593 6 117 6.85E-22 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_2073 51af9194cb4b9cf11ce46a0601b3f57d 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 2.0E-133 T 17-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 FORC55_2073 51af9194cb4b9cf11ce46a0601b3f57d 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 5.2E-157 T 17-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 FORC55_3324 9aac037bb651c756f013a31b7f782a59 436 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 31 408 7.3E-124 T 17-10-2018 FORC55_3324 9aac037bb651c756f013a31b7f782a59 436 Pfam PF07690 Major Facilitator Superfamily 32 391 1.6E-48 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_3324 9aac037bb651c756f013a31b7f782a59 436 PIRSF PIRSF002808 3 436 1.5E-125 T 17-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 FORC55_3324 9aac037bb651c756f013a31b7f782a59 436 Gene3D G3DSA:1.20.1250.20 14 218 2.9E-47 T 17-10-2018 FORC55_3324 9aac037bb651c756f013a31b7f782a59 436 Gene3D G3DSA:1.20.1250.20 234 431 3.0E-43 T 17-10-2018 FORC55_3324 9aac037bb651c756f013a31b7f782a59 436 SUPERFAMILY SSF103473 16 433 1.83E-77 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_3423 240248faf1a58f5896dd2919dd408e0d 336 Gene3D G3DSA:2.40.10.10 16 272 4.5E-43 T 17-10-2018 FORC55_3423 240248faf1a58f5896dd2919dd408e0d 336 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 3.2E-11 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_3423 240248faf1a58f5896dd2919dd408e0d 336 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 121 135 3.2E-11 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_3423 240248faf1a58f5896dd2919dd408e0d 336 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 3.2E-11 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_3423 240248faf1a58f5896dd2919dd408e0d 336 SUPERFAMILY SSF50494 3 272 7.29E-51 T 17-10-2018 IPR009003 Peptidase S1, PA clan FORC55_3423 240248faf1a58f5896dd2919dd408e0d 336 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 17-10-2018 IPR033116 Serine proteases, trypsin family, serine active site FORC55_3423 240248faf1a58f5896dd2919dd408e0d 336 SMART SM00020 23 267 1.2E-30 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 FORC55_3423 240248faf1a58f5896dd2919dd408e0d 336 Pfam PF00089 Trypsin 24 267 1.6E-31 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 FORC55_1238 9224a414f8bf1608bf57be027e835cfc 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 230 8.0E-13 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1238 9224a414f8bf1608bf57be027e835cfc 253 Gene3D G3DSA:3.40.190.10 118 220 1.0E-17 T 17-10-2018 FORC55_1238 9224a414f8bf1608bf57be027e835cfc 253 SUPERFAMILY SSF53850 38 248 1.19E-29 T 17-10-2018 FORC55_1238 9224a414f8bf1608bf57be027e835cfc 253 Gene3D G3DSA:3.40.190.10 56 248 1.0E-17 T 17-10-2018 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 17-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 876 2.7E-287 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 876 17.915 T 17-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.0E-66 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 2.0E-66 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.0E-66 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 2.0E-66 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 2.0E-66 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.0E-66 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 2.0E-66 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 SUPERFAMILY SSF51621 6 876 0.0 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 Gene3D G3DSA:1.20.1440.90 304 386 3.1E-23 T 17-10-2018 FORC55_0239 31dce0c5e6491aed43f290b7b9d2a075 876 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 17-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.8E-63 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.6E-12 T 17-10-2018 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.6E-12 T 17-10-2018 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.6E-12 T 17-10-2018 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.6E-12 T 17-10-2018 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.0E-6 T 17-10-2018 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.0E-6 T 17-10-2018 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-6 T 17-10-2018 FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 SUPERFAMILY SSF51905 3 347 5.11E-28 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0945 3c8efbea0a1f401f25106ee1ed56df7d 429 Gene3D G3DSA:3.50.50.100 1 406 2.6E-114 T 17-10-2018 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 Pfam PF01752 Collagenase 272 558 5.7E-112 T 17-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 Gene3D G3DSA:1.10.1740.190 303 450 8.5E-34 T 17-10-2018 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 Pfam PF08453 Peptidase family M9 N-terminal 31 210 2.5E-49 T 17-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 4.7E-30 T 17-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 4.7E-30 T 17-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 4.7E-30 T 17-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 4.7E-30 T 17-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 4.7E-30 T 17-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 599 670 2.1E-7 T 17-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 Gene3D G3DSA:2.60.120.380 705 801 7.0E-6 T 17-10-2018 FORC55_1186 14307544d1fcb1e0126ec7f1a391b45a 803 Gene3D G3DSA:2.60.120.380 582 683 7.2E-11 T 17-10-2018 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 17-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 SUPERFAMILY SSF54913 225 297 1.56E-20 T 17-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 203 297 3.6E-29 T 17-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 8.9E-56 T 17-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.5E-46 T 17-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 Pfam PF08029 HisG, C-terminal domain 222 295 7.0E-24 T 17-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.616 T 17-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 Gene3D G3DSA:3.40.190.10 6 219 4.5E-70 T 17-10-2018 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 SUPERFAMILY SSF53850 5 222 1.28E-67 T 17-10-2018 FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 Gene3D G3DSA:3.30.70.120 225 298 1.9E-33 T 17-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal FORC55_1652 ae28296bbb4ec9d8708116f4360a7792 298 Gene3D G3DSA:3.40.190.10 102 191 4.5E-70 T 17-10-2018 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 SUPERFAMILY SSF52016 162 372 7.06E-69 T 17-10-2018 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 Gene3D G3DSA:3.30.499.10 683 865 1.2E-70 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 Gene3D G3DSA:3.30.499.10 402 529 8.7E-150 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 SUPERFAMILY SSF74778 2 160 3.4E-68 T 17-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.7E-97 T 17-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 PIRSF PIRSF036687 1 859 0.0 T 17-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 Gene3D G3DSA:1.25.40.310 1 161 4.6E-73 T 17-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 17-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 Gene3D G3DSA:3.20.19.10 162 361 1.8E-80 T 17-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.8E-66 T 17-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 17-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 Gene3D G3DSA:3.40.1060.10 385 681 8.7E-150 T 17-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.9E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_2217 7569aa0af741d6beeca5c5c16ccd3e96 865 SUPERFAMILY SSF53732 379 860 2.09E-147 T 17-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 FORC55_3350 3ad2604af9e679605ea6f82a3f76920f 206 SUPERFAMILY SSF52499 2 205 9.29E-50 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 FORC55_3350 3ad2604af9e679605ea6f82a3f76920f 206 Pfam PF00857 Isochorismatase family 4 202 4.8E-30 T 17-10-2018 IPR000868 Isochorismatase-like GO:0003824 FORC55_3350 3ad2604af9e679605ea6f82a3f76920f 206 Gene3D G3DSA:3.40.50.850 1 205 2.2E-71 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 FORC55_0785 b6a6f23d27d9ee58a52652f07e387b03 338 SUPERFAMILY SSF50341 192 326 1.7E-13 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_0785 b6a6f23d27d9ee58a52652f07e387b03 338 Pfam PF01584 CheW-like domain 194 326 3.2E-14 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0785 b6a6f23d27d9ee58a52652f07e387b03 338 SMART SM00260 190 324 0.0014 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0785 b6a6f23d27d9ee58a52652f07e387b03 338 PIRSF PIRSF020479 4 338 2.1E-145 T 17-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 Gene3D G3DSA:3.40.1550.10 43 230 1.7E-55 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 Pfam PF02154 Flagellar motor switch protein FliM 37 229 9.4E-82 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 PIRSF PIRSF002888 1 328 3.1E-92 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 1.3E-18 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.3E-18 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 1.3E-18 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.3E-18 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 8.7E-121 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 SUPERFAMILY SSF103039 4 230 5.06E-22 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 4.4E-17 T 17-10-2018 IPR001543 Surface presentation of antigen (SpoA) FORC55_0725 ede4591d535d3be6c23bb1663a94eb98 349 SUPERFAMILY SSF101801 248 323 7.98E-14 T 17-10-2018 IPR036429 SpoA-like superfamily FORC55_1942 c9cf9b2ab503bb66e37c13177fc7b548 538 Pfam PF01593 Flavin containing amine oxidoreductase 214 268 2.3E-4 T 17-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 FORC55_1942 c9cf9b2ab503bb66e37c13177fc7b548 538 PIRSF PIRSF038984 1 534 6.1E-240 T 17-10-2018 IPR028348 FAD dependent protein FORC55_1942 c9cf9b2ab503bb66e37c13177fc7b548 538 SUPERFAMILY SSF51905 100 529 4.06E-36 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1942 c9cf9b2ab503bb66e37c13177fc7b548 538 Gene3D G3DSA:3.50.50.60 85 304 3.6E-90 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1942 c9cf9b2ab503bb66e37c13177fc7b548 538 Gene3D G3DSA:3.50.50.60 470 533 1.1E-15 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1942 c9cf9b2ab503bb66e37c13177fc7b548 538 Gene3D G3DSA:3.30.70.2700 1 80 6.7E-30 T 17-10-2018 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 Pfam PF00136 DNA polymerase family B 377 744 4.6E-43 T 17-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 Gene3D G3DSA:1.10.132.60 643 787 2.8E-60 T 17-10-2018 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 SUPERFAMILY SSF56672 385 780 5.51E-116 T 17-10-2018 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 Gene3D G3DSA:3.90.1600.10 458 636 1.9E-56 T 17-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 Gene3D G3DSA:3.90.1600.10 348 443 1.0E-29 T 17-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 189 296 1.5E-13 T 17-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 SUPERFAMILY SSF53098 4 389 3.8E-83 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 Gene3D G3DSA:3.30.70.2250 41 108 2.3E-36 T 17-10-2018 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 17-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 17-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 17-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 Gene3D G3DSA:3.30.420.10 156 347 4.0E-70 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 Gene3D G3DSA:2.40.50.590 6 153 2.3E-36 T 17-10-2018 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 SMART SM00486 153 558 2.2E-64 T 17-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1572 4aeab209b0107376f74255a9ecc8f1ed 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 17-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 3.3E-44 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 3.3E-44 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 3.3E-44 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 3.3E-44 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 3.3E-44 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 3.3E-44 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 SUPERFAMILY SSF55909 4 407 2.32E-125 T 17-10-2018 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 PIRSF PIRSF006356 1 407 2.5E-151 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 Pfam PF02274 Amidinotransferase 18 404 3.0E-111 T 17-10-2018 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 43.321 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 Gene3D G3DSA:1.10.3930.10 68 148 7.3E-143 T 17-10-2018 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 1.1E-178 T 17-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 FORC55_2364 0c0a612e41bc0ac3aa4bfa8f17d69df7 407 Gene3D G3DSA:3.75.10.10 6 404 7.3E-143 T 17-10-2018 FORC55_2673 f0ed7d797098c4780e5725e0733dfda1 1073 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 60 214 3.0E-11 T 17-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 FORC55_2673 f0ed7d797098c4780e5725e0733dfda1 1073 SMART SM00487 287 526 7.3E-12 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2673 f0ed7d797098c4780e5725e0733dfda1 1073 Gene3D G3DSA:3.40.50.300 290 504 6.4E-21 T 17-10-2018 FORC55_2673 f0ed7d797098c4780e5725e0733dfda1 1073 Pfam PF04851 Type III restriction enzyme, res subunit 291 495 2.7E-15 T 17-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 FORC55_2673 f0ed7d797098c4780e5725e0733dfda1 1073 Gene3D G3DSA:3.40.50.300 526 767 1.1E-22 T 17-10-2018 FORC55_2673 f0ed7d797098c4780e5725e0733dfda1 1073 SUPERFAMILY SSF52540 248 497 1.82E-21 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0042 e9579667bc3275f5d2e7f6a47ac5b793 278 Gene3D G3DSA:3.40.50.720 119 239 5.4E-91 T 17-10-2018 FORC55_0042 e9579667bc3275f5d2e7f6a47ac5b793 278 Gene3D G3DSA:3.40.50.10860 8 258 5.4E-91 T 17-10-2018 FORC55_0042 e9579667bc3275f5d2e7f6a47ac5b793 278 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 8.0E-24 T 17-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 FORC55_0042 e9579667bc3275f5d2e7f6a47ac5b793 278 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.06 T 17-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 FORC55_0042 e9579667bc3275f5d2e7f6a47ac5b793 278 SUPERFAMILY SSF53223 6 105 1.38E-32 T 17-10-2018 FORC55_0042 e9579667bc3275f5d2e7f6a47ac5b793 278 SUPERFAMILY SSF51735 106 273 9.38E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0042 e9579667bc3275f5d2e7f6a47ac5b793 278 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 274 3.0E-89 T 17-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 FORC55_0042 e9579667bc3275f5d2e7f6a47ac5b793 278 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 115 195 6.2E-14 T 17-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 SUPERFAMILY SSF55931 102 468 1.08E-138 T 17-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 8.5E-213 T 17-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 SUPERFAMILY SSF54368 3 100 1.19E-36 T 17-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 17-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 SMART SM01230 102 379 4.8E-154 T 17-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 Gene3D G3DSA:3.30.590.10 105 457 2.5E-149 T 17-10-2018 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 17-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.1E-31 T 17-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 5.7E-139 T 17-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 Gene3D G3DSA:3.10.20.70 2 104 8.8E-41 T 17-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 FORC55_0140 46d389bbb8d57c7e8291e171dc15b602 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 17-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 17-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 SUPERFAMILY SSF53067 255 497 4.86E-85 T 17-10-2018 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 Gene3D G3DSA:3.30.420.40 255 499 1.4E-92 T 17-10-2018 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 17-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 3.8E-85 T 17-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.437 T 17-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 PIRSF PIRSF000538 4 503 2.1E-174 T 17-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 SUPERFAMILY SSF53067 5 256 1.5E-93 T 17-10-2018 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 Gene3D G3DSA:3.30.420.40 2 254 2.9E-111 T 17-10-2018 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.3E-61 T 17-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 FORC55_3377 9d7dd9f253d38543c391403a08421914 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 5.0E-227 T 17-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 FORC55_0273 1030134885f9b9996173b9ba93394a7c 329 Pfam PF00561 alpha/beta hydrolase fold 61 301 2.9E-21 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_0273 1030134885f9b9996173b9ba93394a7c 329 SUPERFAMILY SSF53474 21 299 4.63E-44 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0273 1030134885f9b9996173b9ba93394a7c 329 PIRSF PIRSF005211 1 329 3.4E-106 T 17-10-2018 IPR012020 AB hydrolase 4 family FORC55_1827 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 25.9 T 17-10-2018 IPR007454 Uncharacterised protein family UPF0250 FORC55_1827 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Gene3D G3DSA:3.30.70.260 6 92 2.5E-33 T 17-10-2018 FORC55_1827 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.2E-29 T 17-10-2018 IPR007454 Uncharacterised protein family UPF0250 FORC55_1827 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 SUPERFAMILY SSF117991 7 92 1.7E-30 T 17-10-2018 IPR027471 YbeD-like domain superfamily FORC55_2769 6000e745133d011f1d806e0d3c5550e0 118 SUPERFAMILY SSF46785 20 113 1.67E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2769 6000e745133d011f1d806e0d3c5550e0 118 Gene3D G3DSA:1.10.10.10 9 114 2.6E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2769 6000e745133d011f1d806e0d3c5550e0 118 Pfam PF01638 HxlR-like helix-turn-helix 24 106 1.0E-16 T 17-10-2018 IPR002577 Helix-turn-helix, HxlR type FORC55_1425 a966a6a4779f4d36febf54f6bbc88712 338 Gene3D G3DSA:3.40.190.10 212 334 2.7E-6 T 17-10-2018 FORC55_1425 a966a6a4779f4d36febf54f6bbc88712 338 Gene3D G3DSA:3.40.190.10 39 117 4.6E-5 T 17-10-2018 FORC55_1425 a966a6a4779f4d36febf54f6bbc88712 338 Pfam PF09084 NMT1/THI5 like 53 261 6.7E-21 T 17-10-2018 IPR015168 SsuA/THI5-like FORC55_1425 a966a6a4779f4d36febf54f6bbc88712 338 Gene3D G3DSA:3.40.190.10 123 211 4.6E-11 T 17-10-2018 FORC55_1425 a966a6a4779f4d36febf54f6bbc88712 338 SUPERFAMILY SSF53850 42 262 5.44E-31 T 17-10-2018 FORC55_0458 5ff4055250376680b09805f752c9668c 579 Gene3D G3DSA:2.40.50.460 452 579 1.0E-7 T 17-10-2018 FORC55_0458 5ff4055250376680b09805f752c9668c 579 Gene3D G3DSA:3.10.310.30 325 451 1.4E-31 T 17-10-2018 FORC55_0458 5ff4055250376680b09805f752c9668c 579 Pfam PF02272 DHHA1 domain 319 451 4.6E-28 T 17-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 FORC55_0458 5ff4055250376680b09805f752c9668c 579 Pfam PF01368 DHH family 71 204 3.3E-9 T 17-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 FORC55_0458 5ff4055250376680b09805f752c9668c 579 Gene3D G3DSA:3.90.1640.30 44 323 3.5E-89 T 17-10-2018 FORC55_0458 5ff4055250376680b09805f752c9668c 579 SUPERFAMILY SSF64182 45 463 1.22E-118 T 17-10-2018 IPR038763 DHH phosphoesterase superfamily FORC55_0458 5ff4055250376680b09805f752c9668c 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 574 7.6E-158 T 17-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 FORC55_0379 aa97db4098f46099f343ca41656446da 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 4.6E-70 T 17-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 FORC55_0379 aa97db4098f46099f343ca41656446da 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 4.3E-120 T 17-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 SMART SM00490 315 415 8.3E-15 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 Pfam PF11898 Domain of unknown function (DUF3418) 723 1307 6.0E-231 T 17-10-2018 IPR024590 RNA helicase HrpA, C-terminal FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 Gene3D G3DSA:3.40.50.300 263 432 1.8E-55 T 17-10-2018 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 24 1307 0.0 T 17-10-2018 IPR010222 RNA helicase HrpA GO:0004004 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 Pfam PF00270 DEAD/DEAH box helicase 98 243 3.2E-8 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 SMART SM00382 102 395 6.2E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 Gene3D G3DSA:1.20.120.1080 459 567 4.0E-19 T 17-10-2018 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 SMART SM00487 82 269 1.1E-30 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 SUPERFAMILY SSF52540 82 616 4.82E-114 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 Gene3D G3DSA:3.40.50.300 37 262 1.1E-77 T 17-10-2018 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 Pfam PF04408 Helicase associated domain (HA2) 477 569 1.6E-18 T 17-10-2018 IPR007502 Helicase-associated domain GO:0004386 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 SMART SM00847 475 570 1.0E-37 T 17-10-2018 IPR007502 Helicase-associated domain GO:0004386 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 633 709 3.5E-23 T 17-10-2018 IPR011709 Domain of unknown function DUF1605 FORC55_1414 9fe84fbbf24881a1bb0e589617ee24d8 1309 Pfam PF00271 Helicase conserved C-terminal domain 300 414 3.5E-11 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 1.3E-22 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.3E-22 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 1.3E-22 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 SMART SM00304 212 266 7.1E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 SMART SM00283 281 542 1.6E-76 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 Gene3D G3DSA:1.10.287.950 212 543 4.3E-77 T 17-10-2018 FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 172 1.3E-19 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 SUPERFAMILY SSF58104 240 543 3.01E-74 T 17-10-2018 FORC55_3609 f9b9a52a9a6bb2776635b3e74e02fafe 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 508 1.5E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.2E-20 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:3.40.190.10 164 267 2.6E-65 T 17-10-2018 FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:1.10.10.10 1 85 2.7E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 Pfam PF03466 LysR substrate binding domain 89 293 9.0E-45 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:3.40.190.10 91 281 2.6E-65 T 17-10-2018 FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 SUPERFAMILY SSF46785 1 85 8.82E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0248 e3a44274f5b4c45de5c67f58002e4bfb 297 SUPERFAMILY SSF53850 87 295 4.07E-40 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.3E-13 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.3E-13 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.3E-13 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 Gene3D G3DSA:3.40.50.880 1 193 7.8E-62 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 SUPERFAMILY SSF52317 1 192 1.59E-54 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 Pfam PF00117 Glutamine amidotransferase class-I 4 190 5.6E-55 T 17-10-2018 IPR017926 Glutamine amidotransferase FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 3.9E-86 T 17-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.1E-5 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-5 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.6E-36 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.6E-36 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.6E-36 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.6E-36 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.6E-36 T 17-10-2018 FORC55_0265 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.6E-36 T 17-10-2018 FORC55_2519 6b863f39bbfa4d222f15829c124fa2fc 646 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 1.7E-128 T 17-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain FORC55_2519 6b863f39bbfa4d222f15829c124fa2fc 646 Pfam PF13727 CoA-binding domain 69 238 5.8E-8 T 17-10-2018 FORC55_2519 6b863f39bbfa4d222f15829c124fa2fc 646 SUPERFAMILY SSF51735 146 269 3.78E-16 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2519 6b863f39bbfa4d222f15829c124fa2fc 646 SUPERFAMILY SSF51735 280 559 2.65E-51 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2519 6b863f39bbfa4d222f15829c124fa2fc 646 Gene3D G3DSA:3.40.50.720 279 619 2.1E-113 T 17-10-2018 FORC55_2519 6b863f39bbfa4d222f15829c124fa2fc 646 Gene3D G3DSA:3.40.50.720 141 264 5.5E-33 T 17-10-2018 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 967 985 1.6E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 991 1004 1.6E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 962 1.6E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 934 948 1.6E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 SMART SM00388 788 853 1.3E-12 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Pfam PF00072 Response regulator receiver domain 1032 1143 2.1E-10 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Pfam PF12860 PAS fold 634 748 3.0E-44 T 17-10-2018 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Gene3D G3DSA:1.20.1730.10 32 503 6.6E-7 T 17-10-2018 IPR038377 Sodium/glucose symporter superfamily FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Gene3D G3DSA:3.40.50.2300 1019 1147 1.0E-15 T 17-10-2018 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 SUPERFAMILY SSF47384 773 854 8.44E-15 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 SUPERFAMILY SSF55785 626 741 2.72E-9 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 3.4E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1005 4.1E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Gene3D G3DSA:1.10.287.130 748 851 2.5E-14 T 17-10-2018 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Gene3D G3DSA:3.30.450.20 616 747 2.0E-12 T 17-10-2018 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 Gene3D G3DSA:3.30.565.10 852 1007 1.8E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 SMART SM00387 897 1007 1.8E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 SMART SM00448 1030 1143 4.1E-15 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 SUPERFAMILY SSF55874 842 1004 2.75E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2477 8cd583f7bfb2e0729742de2fe3d10f76 1147 SUPERFAMILY SSF52172 1029 1146 1.02E-17 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1419 6e14aa7a9afbb78bd380dea052216a7e 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 4.6E-54 T 17-10-2018 IPR021212 Domain of unknown function DUF2760 FORC55_0577 9afbb464897d877526498fed06e88829 505 Pfam PF05228 CHASE4 domain 58 212 1.7E-26 T 17-10-2018 IPR007892 CHASE4 FORC55_0577 9afbb464897d877526498fed06e88829 505 Gene3D G3DSA:3.30.70.270 325 503 3.8E-46 T 17-10-2018 FORC55_0577 9afbb464897d877526498fed06e88829 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 502 1.5E-40 T 17-10-2018 IPR000160 GGDEF domain FORC55_0577 9afbb464897d877526498fed06e88829 505 SUPERFAMILY SSF55073 344 501 2.9E-38 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0577 9afbb464897d877526498fed06e88829 505 SMART SM00267 328 502 2.5E-50 T 17-10-2018 IPR000160 GGDEF domain FORC55_0577 9afbb464897d877526498fed06e88829 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 498 1.4E-38 T 17-10-2018 IPR000160 GGDEF domain FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 549 565 - T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 Gene3D G3DSA:3.40.930.10 501 646 2.7E-50 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 Pfam PF02378 Phosphotransferase system, EIIC 18 278 5.7E-18 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 SUPERFAMILY SSF55804 505 643 2.09E-40 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 460 5.0E-9 T 17-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 506 644 3.8E-34 T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 1.6E-170 T 17-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 SUPERFAMILY SSF52794 384 471 9.29E-24 T 17-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 FORC55_3620 6fdbdf8d0a31f77733239fd47040e6bc 649 Gene3D G3DSA:3.40.50.2300 371 476 2.7E-35 T 17-10-2018 FORC55_1598 7ccfb105e79481a77db552f6e0163d6a 109 Pfam PF11872 Protein of unknown function (DUF3392) 3 106 1.2E-39 T 17-10-2018 IPR021813 Protein of unknown function DUF3392 FORC55_3155 c4df47b3696a3d95917bb3471633ef51 317 PIRSF PIRSF000535 2 311 4.0E-99 T 17-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 FORC55_3155 c4df47b3696a3d95917bb3471633ef51 317 Pfam PF00294 pfkB family carbohydrate kinase 15 293 3.2E-54 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB FORC55_3155 c4df47b3696a3d95917bb3471633ef51 317 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 309 1.3E-106 T 17-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 FORC55_3155 c4df47b3696a3d95917bb3471633ef51 317 Gene3D G3DSA:3.40.1190.20 2 311 5.0E-97 T 17-10-2018 IPR029056 Ribokinase-like FORC55_3155 c4df47b3696a3d95917bb3471633ef51 317 SUPERFAMILY SSF53613 6 294 4.37E-72 T 17-10-2018 IPR029056 Ribokinase-like FORC55_3155 c4df47b3696a3d95917bb3471633ef51 317 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 7.1E-105 T 17-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 FORC55_3155 c4df47b3696a3d95917bb3471633ef51 317 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 Gene3D G3DSA:3.40.190.10 25 308 3.0E-63 T 17-10-2018 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 Gene3D G3DSA:3.40.190.10 120 315 3.0E-63 T 17-10-2018 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 Pfam PF13416 Bacterial extracellular solute-binding protein 36 294 4.5E-22 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 SUPERFAMILY SSF53850 22 336 3.57E-56 T 17-10-2018 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 111 127 1.4E-15 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 241 260 1.4E-15 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 286 312 1.4E-15 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 26 42 1.4E-15 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 175 1.4E-15 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_2034 6501fd9f9de5943cc24f02beb0e81a87 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 63 1.4E-15 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_3218 d8792a8e2b70ce49f70603561ce1ad0f 249 SUPERFAMILY SSF53850 8 248 3.26E-28 T 17-10-2018 FORC55_3218 d8792a8e2b70ce49f70603561ce1ad0f 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 13 248 7.0E-22 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3218 d8792a8e2b70ce49f70603561ce1ad0f 249 Gene3D G3DSA:3.40.190.10 17 247 3.5E-20 T 17-10-2018 FORC55_3218 d8792a8e2b70ce49f70603561ce1ad0f 249 Gene3D G3DSA:3.40.190.10 96 205 3.5E-20 T 17-10-2018 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 SMART SM00471 41 153 3.7E-11 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 Pfam PF13291 ACT domain 626 702 1.4E-14 T 17-10-2018 IPR002912 ACT domain FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 Gene3D G3DSA:3.10.20.30 382 456 5.4E-29 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 Pfam PF02824 TGS domain 389 447 2.3E-19 T 17-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 Gene3D G3DSA:1.10.3210.10 3 190 1.5E-79 T 17-10-2018 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 Gene3D G3DSA:3.30.70.260 626 705 5.7E-14 T 17-10-2018 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 SUPERFAMILY SSF109604 3 190 1.82E-74 T 17-10-2018 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 SUPERFAMILY SSF81301 180 393 4.58E-59 T 17-10-2018 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.2E-34 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 SUPERFAMILY SSF81271 376 448 1.05E-20 T 17-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 Pfam PF13328 HD domain 28 175 4.2E-53 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 1.3E-270 T 17-10-2018 IPR004811 RelA/SpoT family GO:0015969 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 Gene3D G3DSA:3.30.460.10 193 325 6.1E-46 T 17-10-2018 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 SUPERFAMILY SSF55021 630 702 1.83E-8 T 17-10-2018 FORC55_0181 5538bb2d725e90f676a3fb7dfe40652c 705 SMART SM00954 235 345 6.9E-57 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 FORC55_3672 ceea72df6b944aae850e1c1bac7313da 89 Gene3D G3DSA:3.30.750.24 1 89 2.7E-10 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_3672 ceea72df6b944aae850e1c1bac7313da 89 SUPERFAMILY SSF52091 2 85 4.12E-13 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_3672 ceea72df6b944aae850e1c1bac7313da 89 Pfam PF13466 STAS domain 4 80 2.1E-16 T 17-10-2018 IPR002645 STAS domain FORC55_2228 7a1a840195c380971ed3af5647222989 293 Gene3D G3DSA:3.40.50.620 1 179 1.2E-80 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2228 7a1a840195c380971ed3af5647222989 293 Gene3D G3DSA:3.30.1300.10 181 283 8.1E-27 T 17-10-2018 FORC55_2228 7a1a840195c380971ed3af5647222989 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 6.2E-107 T 17-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 FORC55_2228 7a1a840195c380971ed3af5647222989 293 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 1.5E-100 T 17-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 FORC55_2228 7a1a840195c380971ed3af5647222989 293 SUPERFAMILY SSF52374 1 281 9.38E-108 T 17-10-2018 FORC55_2228 7a1a840195c380971ed3af5647222989 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 68 4.2E-10 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 FORC55_2228 7a1a840195c380971ed3af5647222989 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.919 T 17-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 FORC55_2549 0da1950db4a8bbeeed3f0ab937f029e0 426 Pfam PF00534 Glycosyl transferases group 1 236 400 3.2E-8 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 FORC55_2549 0da1950db4a8bbeeed3f0ab937f029e0 426 Gene3D G3DSA:3.40.50.2000 218 405 4.1E-61 T 17-10-2018 FORC55_2549 0da1950db4a8bbeeed3f0ab937f029e0 426 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 4.4E-64 T 17-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 FORC55_2549 0da1950db4a8bbeeed3f0ab937f029e0 426 Gene3D G3DSA:3.40.50.11720 33 210 1.3E-48 T 17-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 FORC55_2549 0da1950db4a8bbeeed3f0ab937f029e0 426 SUPERFAMILY SSF53756 53 405 2.88E-16 T 17-10-2018 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 269 5.5E-112 T 17-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 39.402 T 17-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 233 4.3E-42 T 17-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 1.4E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 1.4E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 Gene3D G3DSA:3.40.50.620 3 282 2.3E-106 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 Gene3D G3DSA:3.40.50.620 78 216 2.3E-106 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2224 1d41be3909cf4aa75f1c48debdaeb40b 296 SUPERFAMILY SSF52374 3 282 6.52E-85 T 17-10-2018 FORC55_2531 da670149943d9b46e8b2c585f33a2c67 204 Gene3D G3DSA:2.160.10.10 4 199 3.4E-53 T 17-10-2018 FORC55_2531 da670149943d9b46e8b2c585f33a2c67 204 SUPERFAMILY SSF51161 53 183 2.5E-37 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_2531 da670149943d9b46e8b2c585f33a2c67 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 141 2.6E-8 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0639 82990733dde1a1471121caef13964ad9 883 SUPERFAMILY SSF55545 208 331 3.14E-25 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 FORC55_0639 82990733dde1a1471121caef13964ad9 883 Gene3D G3DSA:2.60.40.10 818 882 2.5E-26 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_0639 82990733dde1a1471121caef13964ad9 883 SMART SM01081 34 195 5.8E-90 T 17-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 FORC55_0639 82990733dde1a1471121caef13964ad9 883 Gene3D G3DSA:3.20.20.80 330 817 9.1E-165 T 17-10-2018 FORC55_0639 82990733dde1a1471121caef13964ad9 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 4.6E-16 T 17-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal FORC55_0639 82990733dde1a1471121caef13964ad9 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 3.3E-30 T 17-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 FORC55_0639 82990733dde1a1471121caef13964ad9 883 Gene3D G3DSA:3.30.379.10 204 329 3.0E-24 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 FORC55_0639 82990733dde1a1471121caef13964ad9 883 SUPERFAMILY SSF51445 332 772 3.75E-143 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_0639 82990733dde1a1471121caef13964ad9 883 SUPERFAMILY SSF49384 26 198 8.79E-66 T 17-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 FORC55_0639 82990733dde1a1471121caef13964ad9 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 4.7E-62 T 17-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 FORC55_0639 82990733dde1a1471121caef13964ad9 883 SUPERFAMILY SSF81296 780 881 4.62E-39 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_0639 82990733dde1a1471121caef13964ad9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 5.4E-48 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_0639 82990733dde1a1471121caef13964ad9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 5.4E-48 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_0639 82990733dde1a1471121caef13964ad9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 5.4E-48 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_0639 82990733dde1a1471121caef13964ad9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 5.4E-48 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_0639 82990733dde1a1471121caef13964ad9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 5.4E-48 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_0639 82990733dde1a1471121caef13964ad9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 5.4E-48 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_0639 82990733dde1a1471121caef13964ad9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 5.4E-48 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_0639 82990733dde1a1471121caef13964ad9 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 5.4E-48 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_0639 82990733dde1a1471121caef13964ad9 883 Gene3D G3DSA:2.60.40.290 25 167 7.4E-55 T 17-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 FORC55_0639 82990733dde1a1471121caef13964ad9 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 2.0E-109 T 17-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.1E-24 T 17-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 3.3E-19 T 17-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 218 3.8E-86 T 17-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.952 T 17-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 Gene3D G3DSA:3.30.2350.10 1 248 3.5E-94 T 17-10-2018 FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 2.7E-57 T 17-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 SUPERFAMILY SSF88697 250 309 8.45E-15 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 SUPERFAMILY SSF55120 9 247 4.32E-83 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2177 7fbefc82d76c8cf5539128c4ab1ed269 312 Gene3D G3DSA:2.30.130.10 249 311 2.0E-21 T 17-10-2018 IPR036974 PUA domain superfamily GO:0003723 FORC55_2570 ceefbc9aec4b0ea06f01376c922378e7 325 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 14 316 7.7E-117 T 17-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 FORC55_2570 ceefbc9aec4b0ea06f01376c922378e7 325 PIRSF PIRSF026649 13 316 4.5E-85 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 FORC55_2570 ceefbc9aec4b0ea06f01376c922378e7 325 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 50.627 T 17-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 FORC55_2570 ceefbc9aec4b0ea06f01376c922378e7 325 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 5.9E-76 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 FORC55_0417 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Gene3D G3DSA:3.20.20.70 1 243 1.1E-108 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0417 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.7E-105 T 17-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 FORC55_0417 57b3a0cd0bb92ea1cc72437c229ce1d8 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 1.0E-98 T 17-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 FORC55_0417 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.73 T 17-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 FORC55_0417 57b3a0cd0bb92ea1cc72437c229ce1d8 243 SUPERFAMILY SSF63892 4 241 1.44E-101 T 17-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:1.10.3060.10 621 833 1.2E-76 T 17-10-2018 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF81886 620 891 5.75E-85 T 17-10-2018 IPR036266 SecA, Wing/Scaffold superfamily FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 SMART SM00958 228 359 3.1E-82 T 17-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Pfam PF02810 SEC-C motif 883 901 2.0E-10 T 17-10-2018 IPR004027 SEC-C motif FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:3.40.50.300 418 620 1.1E-87 T 17-10-2018 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Pfam PF07517 SecA DEAD-like domain 7 403 7.3E-133 T 17-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF52540 5 416 2.84E-85 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 SMART SM00957 6 403 0.0 T 17-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF81767 227 369 4.97E-43 T 17-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 ProSitePatterns PS01312 SecA family signature. 501 516 - T 17-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:3.90.1440.10 229 369 2.3E-175 T 17-10-2018 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Pfam PF01043 SecA preprotein cross-linking domain 232 359 5.0E-38 T 17-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.108 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF52540 418 610 2.38E-57 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:3.40.50.300 22 416 2.3E-175 T 17-10-2018 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.6E-67 T 17-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 170 190 1.6E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 414 427 1.6E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 340 362 1.6E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 63 87 1.6E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 101 115 1.6E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 117 127 1.6E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0479 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 377 394 1.6E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.1E-273 T 17-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 Gene3D G3DSA:2.40.50.140 77 155 7.7E-11 T 17-10-2018 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 Pfam PF00575 S1 RNA binding domain 650 731 5.4E-14 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 Gene3D G3DSA:2.40.50.140 653 763 4.0E-27 T 17-10-2018 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 SUPERFAMILY SSF50249 71 154 1.44E-15 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 SUPERFAMILY SSF50249 227 650 7.42E-144 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 SMART SM00357 90 152 1.3E-12 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 Pfam PF08206 Ribonuclease B OB domain 91 151 8.2E-21 T 17-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 Pfam PF00773 RNB domain 267 594 2.5E-107 T 17-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 17-10-2018 IPR022966 Ribonuclease II/R, conserved site FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 SMART SM00955 267 595 2.4E-186 T 17-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 SMART SM00316 650 733 9.9E-15 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 2.7E-255 T 17-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 SUPERFAMILY SSF50249 651 739 5.97E-23 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 60.252 T 17-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 Pfam PF08461 Ribonuclease R winged-helix domain 26 88 2.3E-12 T 17-10-2018 IPR013668 Ribonuclease R winged-helix domain FORC55_0285 9b9d8480c78ee3d3c0d5e593a89086d3 821 SUPERFAMILY SSF50249 145 244 3.3E-16 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0320 45a125afefa06b792b4e01b052996cde 460 Gene3D G3DSA:3.40.50.300 2 210 1.2E-73 T 17-10-2018 FORC55_0320 45a125afefa06b792b4e01b052996cde 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 4.9E-46 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_0320 45a125afefa06b792b4e01b052996cde 460 Gene3D G3DSA:3.40.50.300 211 371 5.7E-46 T 17-10-2018 FORC55_0320 45a125afefa06b792b4e01b052996cde 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_0320 45a125afefa06b792b4e01b052996cde 460 SMART SM00487 23 220 8.3E-55 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_0320 45a125afefa06b792b4e01b052996cde 460 Pfam PF03880 DbpA RNA binding domain 387 457 8.7E-22 T 17-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain FORC55_0320 45a125afefa06b792b4e01b052996cde 460 Pfam PF00271 Helicase conserved C-terminal domain 232 338 3.7E-28 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0320 45a125afefa06b792b4e01b052996cde 460 Gene3D G3DSA:3.30.70.330 386 459 1.5E-18 T 17-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily FORC55_0320 45a125afefa06b792b4e01b052996cde 460 SMART SM00490 257 338 4.7E-30 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0320 45a125afefa06b792b4e01b052996cde 460 SUPERFAMILY SSF52540 73 354 2.5E-70 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3045 2b13bf77ab422289ce136389375a70c7 138 SUPERFAMILY SSF55729 2 127 3.99E-25 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3045 2b13bf77ab422289ce136389375a70c7 138 Gene3D G3DSA:3.40.630.30 1 131 1.6E-32 T 17-10-2018 FORC55_3045 2b13bf77ab422289ce136389375a70c7 138 Pfam PF00583 Acetyltransferase (GNAT) family 30 118 3.6E-13 T 17-10-2018 IPR000182 GNAT domain FORC55_2999 2b13bf77ab422289ce136389375a70c7 138 SUPERFAMILY SSF55729 2 127 3.99E-25 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2999 2b13bf77ab422289ce136389375a70c7 138 Gene3D G3DSA:3.40.630.30 1 131 1.6E-32 T 17-10-2018 FORC55_2999 2b13bf77ab422289ce136389375a70c7 138 Pfam PF00583 Acetyltransferase (GNAT) family 30 118 3.6E-13 T 17-10-2018 IPR000182 GNAT domain FORC55_1620 53e2a1812171622c0695b38da22cf7fb 323 SUPERFAMILY SSF53335 91 323 5.88E-35 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1620 53e2a1812171622c0695b38da22cf7fb 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 53.964 T 17-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 FORC55_1620 53e2a1812171622c0695b38da22cf7fb 323 Gene3D G3DSA:3.40.50.150 77 293 2.7E-24 T 17-10-2018 FORC55_1620 53e2a1812171622c0695b38da22cf7fb 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.7E-172 T 17-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like FORC55_1620 53e2a1812171622c0695b38da22cf7fb 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 9 321 3.6E-146 T 17-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 Pfam PF16458 Beta-prism lectin 508 637 8.6E-56 T 17-10-2018 IPR032496 Hemolysin, beta-prism lectin FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 Pfam PF16458 Beta-prism lectin 822 955 1.3E-54 T 17-10-2018 IPR032496 Hemolysin, beta-prism lectin FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 Gene3D G3DSA:2.60.20.40 21 119 2.0E-44 T 17-10-2018 FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 Gene3D G3DSA:2.60.20.40 120 216 2.8E-41 T 17-10-2018 FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 SUPERFAMILY SSF69318 395 795 2.22E-10 T 17-10-2018 FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 SUPERFAMILY SSF69318 252 487 2.75E-16 T 17-10-2018 FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 Gene3D G3DSA:2.100.10.30 820 957 2.7E-35 T 17-10-2018 IPR036404 Jacalin-like lectin domain superfamily FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 Gene3D G3DSA:2.100.10.30 503 639 1.0E-35 T 17-10-2018 IPR036404 Jacalin-like lectin domain superfamily FORC55_1842 aae452b4a3ac5763e1bc78be62b57ae0 957 ProSitePatterns PS00018 EF-hand calcium-binding domain. 255 267 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site FORC55_2357 788eb4e6788133b91de7f063801024fe 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.6E-23 T 17-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.6E-23 T 17-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.6E-23 T 17-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.6E-23 T 17-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.037 T 17-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 Gene3D G3DSA:1.10.10.10 1 74 7.0E-34 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2357 788eb4e6788133b91de7f063801024fe 156 SUPERFAMILY SSF55252 82 151 1.44E-18 T 17-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 SUPERFAMILY SSF46785 3 76 3.54E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2357 788eb4e6788133b91de7f063801024fe 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.1E-23 T 17-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 145 2.0E-21 T 17-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 145 3.0E-20 T 17-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 Gene3D G3DSA:3.30.1360.40 75 156 2.2E-32 T 17-10-2018 FORC55_2357 788eb4e6788133b91de7f063801024fe 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 1.3E-41 T 17-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 FORC55_2758 9e989a8c3230a928b11edd64a3b6205e 338 Pfam PF00563 EAL domain 85 321 4.7E-60 T 17-10-2018 IPR001633 EAL domain FORC55_2758 9e989a8c3230a928b11edd64a3b6205e 338 Gene3D G3DSA:3.20.20.450 80 336 5.9E-77 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2758 9e989a8c3230a928b11edd64a3b6205e 338 SUPERFAMILY SSF55073 2 66 1.02E-7 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2758 9e989a8c3230a928b11edd64a3b6205e 338 SUPERFAMILY SSF141868 85 330 3.79E-73 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2758 9e989a8c3230a928b11edd64a3b6205e 338 SMART SM00052 79 326 3.2E-75 T 17-10-2018 IPR001633 EAL domain FORC55_2758 9e989a8c3230a928b11edd64a3b6205e 338 Gene3D G3DSA:3.30.70.270 1 77 1.7E-8 T 17-10-2018 FORC55_1858 d56a362d1c1d445d2c0d0195427bce72 352 Gene3D G3DSA:2.40.50.100 58 186 1.3E-70 T 17-10-2018 FORC55_1858 d56a362d1c1d445d2c0d0195427bce72 352 Gene3D G3DSA:2.40.30.170 45 268 1.3E-70 T 17-10-2018 FORC55_1858 d56a362d1c1d445d2c0d0195427bce72 352 SUPERFAMILY SSF111369 48 264 5.23E-38 T 17-10-2018 FORC55_1858 d56a362d1c1d445d2c0d0195427bce72 352 Gene3D G3DSA:1.10.287.470 93 152 1.3E-70 T 17-10-2018 FORC55_1858 d56a362d1c1d445d2c0d0195427bce72 352 Gene3D G3DSA:2.40.420.20 269 337 1.3E-70 T 17-10-2018 FORC55_1858 d56a362d1c1d445d2c0d0195427bce72 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 258 3.4E-30 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_1858 d56a362d1c1d445d2c0d0195427bce72 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 339 4.1E-97 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:2.40.240.10 340 547 9.7E-80 T 17-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:3.90.800.10 101 209 3.8E-107 T 17-10-2018 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:2.40.240.10 348 466 9.7E-80 T 17-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.2E-61 T 17-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 SUPERFAMILY SSF50715 340 549 1.83E-78 T 17-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:1.10.1160.10 261 339 3.0E-37 T 17-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:3.40.50.620 30 247 3.8E-107 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 SUPERFAMILY SSF52374 11 337 2.41E-105 T 17-10-2018 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.512 T 17-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.4E-294 T 17-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_1781 9d85bd5026e85c574ac3696d40ef25ec 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 7.9E-127 T 17-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 FORC55_3374 7564669b7008b960f45a8dc7e7a8a8f3 106 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.291 T 17-10-2018 IPR007458 Protein of unknown function DUF496 FORC55_3374 7564669b7008b960f45a8dc7e7a8a8f3 106 Pfam PF04363 Protein of unknown function (DUF496) 1 92 2.8E-43 T 17-10-2018 IPR007458 Protein of unknown function DUF496 FORC55_3374 7564669b7008b960f45a8dc7e7a8a8f3 106 PIRSF PIRSF028773 1 104 1.1E-48 T 17-10-2018 IPR007458 Protein of unknown function DUF496 FORC55_3374 7564669b7008b960f45a8dc7e7a8a8f3 106 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 4.0E-45 T 17-10-2018 IPR007458 Protein of unknown function DUF496 FORC55_2544 ca9ad7577d7b47c9c475966e489dbf59 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 FORC55_2544 ca9ad7577d7b47c9c475966e489dbf59 186 Gene3D G3DSA:2.160.10.10 5 185 2.5E-50 T 17-10-2018 FORC55_2544 ca9ad7577d7b47c9c475966e489dbf59 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 158 3.3E-6 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_2544 ca9ad7577d7b47c9c475966e489dbf59 186 SUPERFAMILY SSF51161 19 174 7.21E-29 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_0452 f8b92d85e19ec4209f6e1940bd193605 145 Gene3D G3DSA:3.30.700.10 12 142 3.9E-36 T 17-10-2018 FORC55_0452 f8b92d85e19ec4209f6e1940bd193605 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0452 f8b92d85e19ec4209f6e1940bd193605 145 SUPERFAMILY SSF54523 12 141 3.73E-30 T 17-10-2018 FORC55_0452 f8b92d85e19ec4209f6e1940bd193605 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 1.7E-12 T 17-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 FORC55_0452 f8b92d85e19ec4209f6e1940bd193605 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 1.7E-12 T 17-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 FORC55_0452 f8b92d85e19ec4209f6e1940bd193605 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 1.5E-10 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0452 f8b92d85e19ec4209f6e1940bd193605 145 Pfam PF00114 Pilin (bacterial filament) 40 140 6.3E-19 T 17-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 FORC55_0452 f8b92d85e19ec4209f6e1940bd193605 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 2.5E-10 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 Pfam PF00271 Helicase conserved C-terminal domain 206 326 3.6E-13 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 3.0E-50 T 17-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 SMART SM00847 386 476 1.0E-8 T 17-10-2018 IPR007502 Helicase-associated domain GO:0004386 FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 Gene3D G3DSA:3.40.50.300 2 179 8.9E-53 T 17-10-2018 FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 Pfam PF00270 DEAD/DEAH box helicase 10 165 1.1E-8 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 SMART SM00490 226 327 7.4E-15 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 SUPERFAMILY SSF52540 22 486 2.94E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 17-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 SMART SM00487 2 186 8.6E-15 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 Gene3D G3DSA:3.40.50.300 180 344 1.1E-50 T 17-10-2018 FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 Pfam PF04408 Helicase associated domain (HA2) 387 454 2.8E-9 T 17-10-2018 IPR007502 Helicase-associated domain GO:0004386 FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 Gene3D G3DSA:1.20.120.1080 372 476 5.3E-7 T 17-10-2018 FORC55_2220 112aeedbb0140bcad60c89eb964b45fd 820 PIRSF PIRSF005496 1 819 0.0 T 17-10-2018 FORC55_2872 0f4e2dfc53f53987893639c9cfa66b77 447 Pfam PF03553 Na+/H+ antiporter family 50 219 4.2E-13 T 17-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 FORC55_1386 a16c7b4d5ce8a9331d72f356f3f10c01 212 Pfam PF01810 LysE type translocator 15 208 3.2E-32 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_1386 a16c7b4d5ce8a9331d72f356f3f10c01 212 PIRSF PIRSF006324 1 210 3.2E-54 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_1003 2b1f23d7c55361448149d3aa32a36eeb 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 3.7E-102 T 17-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 FORC55_1003 2b1f23d7c55361448149d3aa32a36eeb 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 7.6E-114 T 17-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 FORC55_1003 2b1f23d7c55361448149d3aa32a36eeb 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.881 T 17-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 FORC55_1003 2b1f23d7c55361448149d3aa32a36eeb 353 Gene3D G3DSA:3.40.50.10800 200 295 1.4E-94 T 17-10-2018 FORC55_1003 2b1f23d7c55361448149d3aa32a36eeb 353 Gene3D G3DSA:3.40.50.10800 31 322 1.4E-94 T 17-10-2018 FORC55_1003 2b1f23d7c55361448149d3aa32a36eeb 353 Gene3D G3DSA:3.40.50.10800 115 340 1.4E-94 T 17-10-2018 FORC55_1003 2b1f23d7c55361448149d3aa32a36eeb 353 SUPERFAMILY SSF142754 29 341 1.83E-106 T 17-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.5E-151 T 17-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 Gene3D G3DSA:3.80.30.20 145 377 3.5E-83 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 SMART SM00729 147 367 1.8E-64 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.895 T 17-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 Pfam PF01938 TRAM domain 379 440 8.6E-18 T 17-10-2018 IPR002792 TRAM domain FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 Pfam PF04055 Radical SAM superfamily 151 325 1.4E-27 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 Gene3D G3DSA:3.40.50.12160 3 138 1.5E-33 T 17-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 439 1.4E-198 T 17-10-2018 FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 SUPERFAMILY SSF102114 123 374 6.93E-62 T 17-10-2018 FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.9E-29 T 17-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 FORC55_1812 d587c5e747292e2a727b36ccff351e72 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 17-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 SUPERFAMILY SSF46955 3 50 1.68E-12 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily FORC55_2179 cff038da0182999cd5dd6d2942506296 898 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 315 897 4.3E-285 T 17-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 322 372 4.8E-15 T 17-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 49 2.5E-7 T 17-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal FORC55_2179 cff038da0182999cd5dd6d2942506296 898 SUPERFAMILY SSF52540 391 565 1.99E-52 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2179 cff038da0182999cd5dd6d2942506296 898 SUPERFAMILY SSF50447 799 895 1.96E-34 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Gene3D G3DSA:2.40.30.10 799 896 4.6E-34 T 17-10-2018 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Gene3D G3DSA:3.40.50.300 395 568 4.0E-70 T 17-10-2018 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 SUPERFAMILY SSF50447 571 652 1.27E-24 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Gene3D G3DSA:3.40.50.10050 692 798 3.0E-38 T 17-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily FORC55_2179 cff038da0182999cd5dd6d2942506296 898 ProSitePatterns PS01176 Initiation factor 2 signature. 848 870 - T 17-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Pfam PF00009 Elongation factor Tu GTP binding domain 401 558 5.4E-32 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Pfam PF11987 Translation-initiation factor 2 682 787 7.8E-37 T 17-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 895 17.686 T 17-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Gene3D G3DSA:2.40.30.10 569 687 4.3E-41 T 17-10-2018 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Gene3D G3DSA:3.30.56.50 2 50 1.7E-24 T 17-10-2018 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 SUPERFAMILY SSF52156 675 804 5.89E-39 T 17-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily FORC55_2179 cff038da0182999cd5dd6d2942506296 898 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 400 555 1.5E-32 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_2179 cff038da0182999cd5dd6d2942506296 898 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 7.2E-16 T 17-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial FORC55_3073 7f71158da000bd7b2be8d5bc34ece156 128 SUPERFAMILY SSF142906 1 120 1.44E-29 T 17-10-2018 IPR038056 YjbR-like superfamily FORC55_3073 7f71158da000bd7b2be8d5bc34ece156 128 Gene3D G3DSA:3.90.1150.30 1 120 1.6E-11 T 17-10-2018 IPR038056 YjbR-like superfamily FORC55_3073 7f71158da000bd7b2be8d5bc34ece156 128 Pfam PF04237 YjbR 12 103 5.8E-13 T 17-10-2018 IPR007351 Uncharacterised protein YjbR FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 Gene3D G3DSA:2.40.30.170 46 307 3.4E-53 T 17-10-2018 FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 367 6.2E-34 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 Gene3D G3DSA:2.40.420.20 41 367 3.4E-53 T 17-10-2018 FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 Gene3D G3DSA:2.40.50.100 57 217 3.4E-53 T 17-10-2018 FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 Gene3D G3DSA:1.10.287.470 91 177 3.4E-53 T 17-10-2018 FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 1.4E-5 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 348 363 1.4E-5 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 257 1.2E-17 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_1267 dce6dc14493c49ac3bec9c0c2872214b 377 SUPERFAMILY SSF111369 50 235 2.62E-16 T 17-10-2018 FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 8.7E-15 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 SUPERFAMILY SSF54909 68 152 1.18E-19 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 SUPERFAMILY SSF46785 6 67 6.39E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 Gene3D G3DSA:3.30.70.920 59 141 2.5E-32 T 17-10-2018 FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 Gene3D G3DSA:1.10.10.10 3 58 1.3E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.2E-10 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.2E-10 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.2E-10 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 Pfam PF01037 Lrp/AsnC ligand binding domain 74 144 1.5E-17 T 17-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain FORC55_0056 a170109fa12b364988a65509f6cf65ef 153 SMART SM00344 7 114 4.6E-41 T 17-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 6.8E-10 T 17-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 Gene3D G3DSA:2.40.110.10 177 300 1.8E-90 T 17-10-2018 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 7.2E-109 T 17-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 SUPERFAMILY SSF47203 301 453 2.42E-20 T 17-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 SUPERFAMILY SSF56645 61 296 2.62E-46 T 17-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 3.4E-15 T 17-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 Gene3D G3DSA:1.20.140.10 301 446 1.8E-90 T 17-10-2018 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 1.2E-8 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 FORC55_1026 683b2ddf7e425ad11dcee97eddca5e08 760 Gene3D G3DSA:1.10.540.10 63 176 1.8E-90 T 17-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 FORC55_1666 20d66ad3f95f7aee87e33de28f77553c 139 Pfam PF12680 SnoaL-like domain 6 109 1.3E-16 T 17-10-2018 IPR037401 SnoaL-like domain FORC55_1666 20d66ad3f95f7aee87e33de28f77553c 139 Gene3D G3DSA:3.10.450.50 4 127 2.3E-23 T 17-10-2018 FORC55_1666 20d66ad3f95f7aee87e33de28f77553c 139 SUPERFAMILY SSF54427 4 131 1.83E-27 T 17-10-2018 IPR032710 NTF2-like domain superfamily FORC55_2698 a420f8689021507ef9799a4cb4076178 553 Gene3D G3DSA:1.10.287.950 221 553 3.5E-70 T 17-10-2018 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 SMART SM01049 44 130 1.4E-19 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 SMART SM00283 291 552 7.6E-72 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 Pfam PF17200 Single Cache domain 2 48 188 1.5E-29 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 SMART SM00304 222 276 2.2E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 516 3.4E-39 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 SUPERFAMILY SSF58104 244 553 1.44E-73 T 17-10-2018 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 197 217 3.4E-5 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 3.4E-5 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2698 a420f8689021507ef9799a4cb4076178 553 Gene3D G3DSA:3.30.450.20 32 199 6.1E-33 T 17-10-2018 FORC55_2197 f687c0bc45d41e6142d60438646a2afc 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_2197 f687c0bc45d41e6142d60438646a2afc 432 Pfam PF00202 Aminotransferase class-III 33 395 6.1E-77 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_2197 f687c0bc45d41e6142d60438646a2afc 432 Gene3D G3DSA:3.90.1150.10 7 419 3.2E-179 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_2197 f687c0bc45d41e6142d60438646a2afc 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 4.2E-194 T 17-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 FORC55_2197 f687c0bc45d41e6142d60438646a2afc 432 Gene3D G3DSA:3.40.640.10 69 317 3.2E-179 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2197 f687c0bc45d41e6142d60438646a2afc 432 SUPERFAMILY SSF53383 1 423 1.99E-134 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2197 f687c0bc45d41e6142d60438646a2afc 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.97 T 17-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 119 205 20.021 T 17-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 12 210 38.328 T 17-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 Gene3D G3DSA:1.10.287.1080 119 210 1.4E-30 T 17-10-2018 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 209 2.8E-19 T 17-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 60 109 6.0E-24 T 17-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 SUPERFAMILY SSF101386 122 210 7.85E-26 T 17-10-2018 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 SUPERFAMILY SSF141734 13 123 1.12E-46 T 17-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 37 109 8.1E-33 T 17-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 122 205 9.9E-33 T 17-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 FORC55_1645 023d33c8f7803b5b5e3d0142d7c94c2e 210 Gene3D G3DSA:3.10.20.400 8 101 4.1E-38 T 17-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 FORC55_2781 64e4b164002a85f3551357a8d8000c77 94 Pfam PF05488 PAAR motif 19 85 5.2E-19 T 17-10-2018 IPR008727 PAAR motif FORC55_2781 64e4b164002a85f3551357a8d8000c77 94 Gene3D G3DSA:2.60.200.60 2 94 1.7E-42 T 17-10-2018 FORC55_2534 b58e6707e9815786e0186b10349e7029 215 Gene3D G3DSA:3.40.50.12230 2 215 1.5E-29 T 17-10-2018 FORC55_2534 b58e6707e9815786e0186b10349e7029 215 SUPERFAMILY SSF50486 166 201 5.81E-5 T 17-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 FORC55_2534 b58e6707e9815786e0186b10349e7029 215 SUPERFAMILY SSF53328 12 157 1.15E-20 T 17-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_2534 b58e6707e9815786e0186b10349e7029 215 Pfam PF00551 Formyl transferase 40 142 4.4E-8 T 17-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_2775 2de53fc504bddba4efcaac5631bb6adc 118 Pfam PF00581 Rhodanese-like domain 27 109 1.9E-12 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_2775 2de53fc504bddba4efcaac5631bb6adc 118 Gene3D G3DSA:3.40.250.10 24 117 5.6E-25 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_2775 2de53fc504bddba4efcaac5631bb6adc 118 SUPERFAMILY SSF52821 14 115 1.83E-25 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_2775 2de53fc504bddba4efcaac5631bb6adc 118 SMART SM00450 25 118 1.1E-20 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_0611 86832369b84c83780d134b1678cf3706 351 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.057 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0611 86832369b84c83780d134b1678cf3706 351 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 8.7E-20 T 17-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 FORC55_0611 86832369b84c83780d134b1678cf3706 351 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.446 T 17-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 FORC55_0611 86832369b84c83780d134b1678cf3706 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 FORC55_0611 86832369b84c83780d134b1678cf3706 351 Gene3D G3DSA:2.160.10.10 100 308 1.7E-66 T 17-10-2018 FORC55_0611 86832369b84c83780d134b1678cf3706 351 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.9E-120 T 17-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 FORC55_0611 86832369b84c83780d134b1678cf3706 351 SUPERFAMILY SSF51161 32 316 8.09E-86 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_0611 86832369b84c83780d134b1678cf3706 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 179 1.2E-8 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0611 86832369b84c83780d134b1678cf3706 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 5.2E-5 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0611 86832369b84c83780d134b1678cf3706 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.4E-9 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0611 86832369b84c83780d134b1678cf3706 351 Gene3D G3DSA:3.40.1390.10 1 99 1.2E-28 T 17-10-2018 FORC55_2990 27c0c2e59c9ab54c4076173d1768e064 129 Gene3D G3DSA:3.30.110.10 34 129 1.3E-38 T 17-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 FORC55_2990 27c0c2e59c9ab54c4076173d1768e064 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 3.6E-14 T 17-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 FORC55_2990 27c0c2e59c9ab54c4076173d1768e064 129 Gene3D G3DSA:3.10.20.80 1 33 1.5E-14 T 17-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 FORC55_2990 27c0c2e59c9ab54c4076173d1768e064 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 1.8E-58 T 17-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 FORC55_2990 27c0c2e59c9ab54c4076173d1768e064 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 2.6E-36 T 17-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 FORC55_2990 27c0c2e59c9ab54c4076173d1768e064 129 SUPERFAMILY SSF54364 1 36 1.83E-13 T 17-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 FORC55_2990 27c0c2e59c9ab54c4076173d1768e064 129 SUPERFAMILY SSF55200 41 129 7.98E-34 T 17-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 FORC55_2990 27c0c2e59c9ab54c4076173d1768e064 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 17-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF47794 349 414 1.73E-16 T 17-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.795 T 17-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.6E-125 T 17-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:3.30.300.20 199 277 5.6E-30 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SMART SM00316 133 198 1.6E-6 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:1.10.150.20 431 490 5.5E-24 T 17-10-2018 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:2.40.50.140 135 198 1.1E-17 T 17-10-2018 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Pfam PF08529 NusA N-terminal domain 4 123 9.7E-35 T 17-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:3.30.300.20 278 344 2.6E-24 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF69705 1 126 1.57E-39 T 17-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:1.10.150.20 352 421 4.1E-28 T 17-10-2018 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF50249 132 199 9.43E-17 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.2E-7 T 17-10-2018 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 3.3E-21 T 17-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 1.6E-17 T 17-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Pfam PF13184 NusA-like KH domain 230 297 3.6E-27 T 17-10-2018 IPR025249 KH domain, NusA-like GO:0003723 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF54814 201 278 1.9E-28 T 17-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SMART SM00322 230 293 34.0 T 17-10-2018 IPR004087 K Homology domain GO:0003676 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SMART SM00322 301 375 0.032 T 17-10-2018 IPR004087 K Homology domain GO:0003676 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF47794 429 492 6.28E-16 T 17-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF54814 279 342 2.88E-15 T 17-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 FORC55_2180 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:3.30.1480.10 1 129 7.3E-44 T 17-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.398 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 17-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Gene3D G3DSA:2.30.33.40 1 96 1.0E-36 T 17-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 17-10-2018 IPR011032 GroES-like superfamily FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.0E-27 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.0E-27 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.0E-27 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.0E-27 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.3E-31 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_0224 b97c6e7abfdbf5cdcbe73ad6abecee77 96 SMART SM00883 2 95 2.9E-49 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_1551 d3092bfd26a4f49cbff046045f3f3055 179 PIRSF PIRSF006135 2 179 2.4E-57 T 17-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 FORC55_1551 d3092bfd26a4f49cbff046045f3f3055 179 Gene3D G3DSA:3.40.50.300 3 177 5.1E-60 T 17-10-2018 FORC55_1551 d3092bfd26a4f49cbff046045f3f3055 179 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 176 4.1E-62 T 17-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 FORC55_1551 d3092bfd26a4f49cbff046045f3f3055 179 SUPERFAMILY SSF52540 4 177 3.82E-54 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 17-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.0E-249 T 17-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.2E-32 T 17-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 Gene3D G3DSA:1.10.274.10 21 146 1.5E-80 T 17-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.7E-124 T 17-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 Gene3D G3DSA:3.50.30.10 4 233 1.5E-80 T 17-10-2018 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 5.2E-20 T 17-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 Gene3D G3DSA:3.20.20.60 234 573 2.5E-125 T 17-10-2018 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 PIRSF PIRSF000732 1 573 3.6E-220 T 17-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 SUPERFAMILY SSF51621 249 549 1.44E-110 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 SUPERFAMILY SSF52009 125 243 7.06E-34 T 17-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 17-10-2018 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 17-10-2018 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 17-10-2018 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 17-10-2018 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 SUPERFAMILY SSF47831 24 143 3.53E-33 T 17-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 FORC55_1809 e780b22830e7a5cb5fcc9874094bb4e5 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 17-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 FORC55_3212 b02990f33bfc8a65b931dd5b3384fe9c 565 Gene3D G3DSA:3.40.190.10 122 312 8.8E-35 T 17-10-2018 FORC55_3212 b02990f33bfc8a65b931dd5b3384fe9c 565 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 3.3E-41 T 17-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain FORC55_3212 b02990f33bfc8a65b931dd5b3384fe9c 565 SUPERFAMILY SSF53850 121 558 5.97E-59 T 17-10-2018 FORC55_3212 b02990f33bfc8a65b931dd5b3384fe9c 565 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 305 1.1E-19 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_3311 b02052c1f92ed95f1297ea3ec9c43fed 174 SUPERFAMILY SSF58104 8 170 6.02E-51 T 17-10-2018 FORC55_3311 b02052c1f92ed95f1297ea3ec9c43fed 174 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 6 136 8.3E-38 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3311 b02052c1f92ed95f1297ea3ec9c43fed 174 Gene3D G3DSA:1.10.287.950 4 174 3.3E-48 T 17-10-2018 FORC55_3311 b02052c1f92ed95f1297ea3ec9c43fed 174 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 33 2.2E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3311 b02052c1f92ed95f1297ea3ec9c43fed 174 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 35 64 2.2E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3311 b02052c1f92ed95f1297ea3ec9c43fed 174 SMART SM00283 3 169 3.1E-5 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3503 f0df974d5724b7c10f91da4013dc2c6b 277 Gene3D G3DSA:3.40.50.1980 138 277 2.0E-40 T 17-10-2018 FORC55_3503 f0df974d5724b7c10f91da4013dc2c6b 277 SUPERFAMILY SSF53807 23 277 6.28E-46 T 17-10-2018 FORC55_3503 f0df974d5724b7c10f91da4013dc2c6b 277 Pfam PF01497 Periplasmic binding protein 25 252 1.6E-37 T 17-10-2018 IPR002491 ABC transporter periplasmic binding domain FORC55_3503 f0df974d5724b7c10f91da4013dc2c6b 277 Gene3D G3DSA:3.40.50.1980 19 137 4.0E-35 T 17-10-2018 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SMART SM00846 3 150 1.3E-97 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.3E-46 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.3E-46 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.3E-46 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.3E-46 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.3E-46 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SUPERFAMILY SSF55347 149 312 9.67E-81 T 17-10-2018 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.2E-138 T 17-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Gene3D G3DSA:3.40.50.720 4 326 8.8E-158 T 17-10-2018 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PIRSF PIRSF000149 1 331 6.0E-137 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Gene3D G3DSA:3.30.360.10 149 314 8.8E-158 T 17-10-2018 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.7E-71 T 17-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 17-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.2E-40 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0842 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SUPERFAMILY SSF51735 3 166 5.46E-69 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 5.2E-20 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.2E-20 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 5.2E-20 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 5.2E-20 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 5.2E-20 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PIRSF PIRSF000350 1 467 1.9E-61 T 17-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 SUPERFAMILY SSF55424 349 467 1.44E-25 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 Gene3D G3DSA:1.10.287.990 37 107 3.5E-96 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 3.4E-17 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.0E-40 T 17-10-2018 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 Gene3D G3DSA:3.50.50.60 147 269 3.5E-96 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 Gene3D G3DSA:3.30.390.30 347 470 7.9E-43 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 Gene3D G3DSA:3.50.50.60 7 330 3.5E-96 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 327 6.3E-43 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_0246 92dae14b0726b4436624ba9adeec971e 484 SUPERFAMILY SSF51905 1 367 1.56E-44 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2044 cf1a03913174fba7696ba0ef9531ef99 237 Gene3D G3DSA:2.40.50.1020 132 236 5.3E-12 T 17-10-2018 FORC55_2044 cf1a03913174fba7696ba0ef9531ef99 237 SUPERFAMILY SSF52172 1 123 8.11E-32 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2044 cf1a03913174fba7696ba0ef9531ef99 237 Gene3D G3DSA:3.40.50.2300 1 125 2.5E-32 T 17-10-2018 FORC55_2044 cf1a03913174fba7696ba0ef9531ef99 237 Pfam PF00072 Response regulator receiver domain 5 112 8.7E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2044 cf1a03913174fba7696ba0ef9531ef99 237 Pfam PF04397 LytTr DNA-binding domain 142 234 1.4E-25 T 17-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 FORC55_2044 cf1a03913174fba7696ba0ef9531ef99 237 SMART SM00850 141 235 1.1E-29 T 17-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 FORC55_2044 cf1a03913174fba7696ba0ef9531ef99 237 SMART SM00448 2 112 9.6E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1456 cd61b14fc08b4e6ac4bfbaeb045b6355 625 Gene3D G3DSA:3.40.50.12780 35 494 5.0E-103 T 17-10-2018 FORC55_1456 cd61b14fc08b4e6ac4bfbaeb045b6355 625 Gene3D G3DSA:3.30.300.30 497 623 7.9E-25 T 17-10-2018 FORC55_1456 cd61b14fc08b4e6ac4bfbaeb045b6355 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 2.1E-16 T 17-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 FORC55_1456 cd61b14fc08b4e6ac4bfbaeb045b6355 625 SUPERFAMILY SSF56801 3 602 2.62E-156 T 17-10-2018 FORC55_1456 cd61b14fc08b4e6ac4bfbaeb045b6355 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_1456 cd61b14fc08b4e6ac4bfbaeb045b6355 625 Pfam PF00501 AMP-binding enzyme 65 501 9.6E-83 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_1456 cd61b14fc08b4e6ac4bfbaeb045b6355 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 5.7E-26 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain FORC55_1397 776d7e4676b0a83ea267e08b7f156c68 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 543 4.9E-39 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1397 776d7e4676b0a83ea267e08b7f156c68 578 Pfam PF00672 HAMP domain 250 297 3.1E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1397 776d7e4676b0a83ea267e08b7f156c68 578 SMART SM00283 315 576 4.6E-54 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1397 776d7e4676b0a83ea267e08b7f156c68 578 SUPERFAMILY SSF58104 268 577 6.02E-73 T 17-10-2018 FORC55_1397 776d7e4676b0a83ea267e08b7f156c68 578 Gene3D G3DSA:1.10.287.950 247 578 1.5E-67 T 17-10-2018 FORC55_1397 776d7e4676b0a83ea267e08b7f156c68 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.6E-5 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1397 776d7e4676b0a83ea267e08b7f156c68 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 329 358 1.6E-5 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1397 776d7e4676b0a83ea267e08b7f156c68 578 SMART SM00304 246 300 1.7E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0507 8b15c94772ac295634b92f96e3b7913a 141 PIRSF PIRSF028680 1 141 4.2E-70 T 17-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 FORC55_0507 8b15c94772ac295634b92f96e3b7913a 141 SUPERFAMILY SSF56935 29 134 3.75E-5 T 17-10-2018 FORC55_1816 1bd977062aec2ffc2080cbd810b909d5 505 Pfam PF00795 Carbon-nitrogen hydrolase 222 473 1.9E-41 T 17-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 FORC55_1816 1bd977062aec2ffc2080cbd810b909d5 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.443 T 17-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 FORC55_1816 1bd977062aec2ffc2080cbd810b909d5 505 SUPERFAMILY SSF56317 215 485 2.09E-40 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily FORC55_1816 1bd977062aec2ffc2080cbd810b909d5 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 2.7E-98 T 17-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 FORC55_1816 1bd977062aec2ffc2080cbd810b909d5 505 Gene3D G3DSA:3.60.110.10 211 480 8.0E-15 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Gene3D G3DSA:3.30.450.20 270 358 1.4E-8 T 17-10-2018 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Gene3D G3DSA:3.40.50.2300 709 855 2.6E-41 T 17-10-2018 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.3E-14 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SUPERFAMILY SSF55874 516 686 1.44E-46 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Gene3D G3DSA:3.30.450.20 859 955 1.4E-6 T 17-10-2018 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SMART SM00388 459 527 2.1E-17 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SUPERFAMILY SSF55785 861 933 5.9E-7 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SMART SM00448 722 835 9.9E-46 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.8E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.8E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.8E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.8E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Gene3D G3DSA:1.10.8.500 376 430 7.5E-17 T 17-10-2018 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SMART SM00091 873 938 0.0036 T 17-10-2018 IPR000014 PAS domain FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Pfam PF00672 HAMP domain 379 427 2.2E-12 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SMART SM00387 573 684 2.4E-38 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SMART SM00304 377 430 4.8E-12 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Pfam PF00072 Response regulator receiver domain 725 835 2.8E-32 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Pfam PF13188 PAS domain 879 914 7.7E-4 T 17-10-2018 IPR000014 PAS domain FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SUPERFAMILY SSF52172 717 846 1.57E-41 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Gene3D G3DSA:3.30.565.10 528 689 5.4E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Gene3D G3DSA:1.10.287.130 445 527 1.0E-19 T 17-10-2018 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.2E-27 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SUPERFAMILY SSF47384 446 527 3.14E-18 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_2200 39f184ea29dda17ba5a8ba064245ae8a 1129 SUPERFAMILY SSF158472 378 428 7.98E-11 T 17-10-2018 FORC55_3496 60f18e5ee2f75f140f7e66a9aaccf73a 578 SMART SM00304 248 301 4.8E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3496 60f18e5ee2f75f140f7e66a9aaccf73a 578 Gene3D G3DSA:1.10.287.950 247 578 8.8E-65 T 17-10-2018 FORC55_3496 60f18e5ee2f75f140f7e66a9aaccf73a 578 SUPERFAMILY SSF58104 269 577 4.01E-67 T 17-10-2018 FORC55_3496 60f18e5ee2f75f140f7e66a9aaccf73a 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 544 7.1E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3496 60f18e5ee2f75f140f7e66a9aaccf73a 578 SMART SM00283 316 577 7.6E-58 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 17-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 Pfam PF01546 Peptidase family M20/M25/M40 139 402 1.8E-14 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 SUPERFAMILY SSF53187 1 403 2.6E-80 T 17-10-2018 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 17-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 Gene3D G3DSA:3.30.70.360 209 319 1.8E-173 T 17-10-2018 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.432 T 17-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 SUPERFAMILY SSF55031 209 319 2.27E-36 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain FORC55_2859 6c843fcce413a221c84997cbfe599612 410 Pfam PF07687 Peptidase dimerisation domain 206 308 1.3E-12 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain FORC55_2859 6c843fcce413a221c84997cbfe599612 410 Gene3D G3DSA:3.40.630.10 4 400 1.8E-173 T 17-10-2018 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 PIRSF PIRSF037215 1 408 6.5E-179 T 17-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 FORC55_2859 6c843fcce413a221c84997cbfe599612 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 404 2.6E-153 T 17-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 FORC55_1478 b7607130060c58c085572a6392dd8d06 158 SUPERFAMILY SSF52172 1 133 5.41E-22 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1478 b7607130060c58c085572a6392dd8d06 158 SMART SM00448 4 125 2.7E-12 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1478 b7607130060c58c085572a6392dd8d06 158 Pfam PF00072 Response regulator receiver domain 6 124 2.0E-14 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1478 b7607130060c58c085572a6392dd8d06 158 Gene3D G3DSA:3.40.50.2300 1 137 7.3E-20 T 17-10-2018 FORC55_0835 1778679efa25bfcfa7471b4b02b35109 405 Gene3D G3DSA:3.30.420.40 208 377 5.0E-115 T 17-10-2018 FORC55_0835 1778679efa25bfcfa7471b4b02b35109 405 Gene3D G3DSA:3.30.420.40 91 387 5.0E-115 T 17-10-2018 FORC55_0835 1778679efa25bfcfa7471b4b02b35109 405 Pfam PF00480 ROK family 88 390 2.8E-68 T 17-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_0835 1778679efa25bfcfa7471b4b02b35109 405 SUPERFAMILY SSF53067 86 393 1.1E-55 T 17-10-2018 FORC55_0835 1778679efa25bfcfa7471b4b02b35109 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 17-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_0835 1778679efa25bfcfa7471b4b02b35109 405 SUPERFAMILY SSF46785 10 77 1.22E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0835 1778679efa25bfcfa7471b4b02b35109 405 Gene3D G3DSA:1.10.10.10 2 80 1.1E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3591 1072d895329ad8c91b99fa82ae4419f7 205 SUPERFAMILY SSF52833 109 187 4.92E-18 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_3591 1072d895329ad8c91b99fa82ae4419f7 205 PRINTS PR00160 Glutaredoxin signature 108 126 2.9E-8 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_3591 1072d895329ad8c91b99fa82ae4419f7 205 PRINTS PR00160 Glutaredoxin signature 171 184 2.9E-8 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_3591 1072d895329ad8c91b99fa82ae4419f7 205 PRINTS PR00160 Glutaredoxin signature 157 170 2.9E-8 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_3591 1072d895329ad8c91b99fa82ae4419f7 205 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 17-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 FORC55_3591 1072d895329ad8c91b99fa82ae4419f7 205 Pfam PF00462 Glutaredoxin 109 174 6.8E-16 T 17-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 FORC55_3591 1072d895329ad8c91b99fa82ae4419f7 205 Gene3D G3DSA:3.40.30.10 109 185 2.4E-19 T 17-10-2018 FORC55_2755 e447b6fd3095a4175fcffc2ee090d18a 553 Pfam PF01740 STAS domain 442 536 2.0E-17 T 17-10-2018 IPR002645 STAS domain FORC55_2755 e447b6fd3095a4175fcffc2ee090d18a 553 Pfam PF00916 Sulfate permease family 20 383 8.0E-87 T 17-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 FORC55_2755 e447b6fd3095a4175fcffc2ee090d18a 553 Gene3D G3DSA:3.30.750.24 423 551 6.9E-35 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_2755 e447b6fd3095a4175fcffc2ee090d18a 553 SUPERFAMILY SSF52091 441 542 1.0E-17 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 562 0.0014 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 9.0E-8 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 SUPERFAMILY SSF52540 3 253 4.11E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 SUPERFAMILY SSF52540 303 553 6.06E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 Pfam PF00005 ABC transporter 24 181 3.9E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 Pfam PF00005 ABC transporter 330 483 9.0E-35 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 Gene3D G3DSA:3.40.50.300 1 293 3.0E-86 T 17-10-2018 FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 Gene3D G3DSA:3.40.50.300 300 570 4.2E-86 T 17-10-2018 FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 SMART SM00382 32 231 4.1E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2626 88097fa1a5e1bd94f985b17449aac9cb 571 SMART SM00382 338 534 2.5E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0397 c542c0ecfd307d89c93920fcfb1a17fa 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.615 T 17-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 FORC55_0397 c542c0ecfd307d89c93920fcfb1a17fa 218 Gene3D G3DSA:3.30.70.260 125 196 3.9E-79 T 17-10-2018 FORC55_0397 c542c0ecfd307d89c93920fcfb1a17fa 218 SUPERFAMILY SSF100950 1 146 1.58E-47 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_0397 c542c0ecfd307d89c93920fcfb1a17fa 218 SUPERFAMILY SSF75445 127 198 1.31E-23 T 17-10-2018 FORC55_0397 c542c0ecfd307d89c93920fcfb1a17fa 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 5.7E-68 T 17-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 FORC55_0397 c542c0ecfd307d89c93920fcfb1a17fa 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 3.7E-58 T 17-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 FORC55_0397 c542c0ecfd307d89c93920fcfb1a17fa 218 Gene3D G3DSA:3.40.50.1360 7 207 3.9E-79 T 17-10-2018 FORC55_1047 9b701f6a9289a8879dff4f4577736a47 240 Gene3D G3DSA:1.10.10.2250 1 78 5.9E-37 T 17-10-2018 FORC55_1047 9b701f6a9289a8879dff4f4577736a47 240 Pfam PF04288 MukE-like family 10 234 5.8E-118 T 17-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 FORC55_1047 9b701f6a9289a8879dff4f4577736a47 240 Gene3D G3DSA:1.10.10.2260 88 195 7.8E-50 T 17-10-2018 FORC55_1047 9b701f6a9289a8879dff4f4577736a47 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 239 48.682 T 17-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 FORC55_2267 7a6f27f8436717385bc9ae8173fc6a03 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 6.2E-30 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 FORC55_2267 7a6f27f8436717385bc9ae8173fc6a03 65 Gene3D G3DSA:3.30.70.1680 1 58 1.0E-29 T 17-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 FORC55_2267 7a6f27f8436717385bc9ae8173fc6a03 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 FORC55_2267 7a6f27f8436717385bc9ae8173fc6a03 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 16.928 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 FORC55_2267 7a6f27f8436717385bc9ae8173fc6a03 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 17-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 FORC55_2267 7a6f27f8436717385bc9ae8173fc6a03 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 FORC55_1349 9f153479c97049174f9fec24e5c5a456 93 Pfam PF02303 Helix-destabilising protein 2 84 1.9E-28 T 17-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 FORC55_1349 9f153479c97049174f9fec24e5c5a456 93 Gene3D G3DSA:2.40.50.140 1 89 7.3E-28 T 17-10-2018 FORC55_1349 9f153479c97049174f9fec24e5c5a456 93 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 85 4.0E-29 T 17-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 FORC55_1349 9f153479c97049174f9fec24e5c5a456 93 SUPERFAMILY SSF50249 1 86 5.65E-25 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1344 9f153479c97049174f9fec24e5c5a456 93 Pfam PF02303 Helix-destabilising protein 2 84 1.9E-28 T 17-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 FORC55_1344 9f153479c97049174f9fec24e5c5a456 93 Gene3D G3DSA:2.40.50.140 1 89 7.3E-28 T 17-10-2018 FORC55_1344 9f153479c97049174f9fec24e5c5a456 93 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 85 4.0E-29 T 17-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 FORC55_1344 9f153479c97049174f9fec24e5c5a456 93 SUPERFAMILY SSF50249 1 86 5.65E-25 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 Gene3D G3DSA:2.10.10.20 20 88 3.3E-13 T 17-10-2018 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 Gene3D G3DSA:2.60.40.10 95 186 1.4E-26 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 SUPERFAMILY SSF51445 314 779 7.2E-76 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 SMART SM00495 37 83 1.1E-16 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 SMART SM00495 1001 1046 0.0013 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 Gene3D G3DSA:3.20.20.80 298 646 1.3E-81 T 17-10-2018 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 Gene3D G3DSA:2.60.40.10 193 281 3.8E-17 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 Gene3D G3DSA:3.10.50.10 675 747 3.2E-12 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 SUPERFAMILY SSF54556 626 746 5.72E-14 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 Pfam PF06483 Chitinase C 804 969 3.6E-73 T 17-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 SUPERFAMILY SSF51055 22 86 5.36E-17 T 17-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 Pfam PF00704 Glycosyl hydrolases family 18 320 776 6.5E-87 T 17-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 SMART SM00636 319 776 8.9E-124 T 17-10-2018 IPR011583 Chitinase II GO:0008061 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 ProSitePatterns PS01095 Chitinases family 18 active site. 468 476 - T 17-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 FORC55_3339 c48b3d7f89b9c7edd669d10d243d58ff 1051 Gene3D G3DSA:3.20.20.80 748 776 3.2E-12 T 17-10-2018 FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 Pfam PF13581 Histidine kinase-like ATPase domain 431 549 3.3E-9 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 Gene3D G3DSA:3.30.565.10 399 559 1.3E-8 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 377 8.4E-37 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 SUPERFAMILY SSF81606 176 375 9.42E-6 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 Gene3D G3DSA:3.60.40.10 159 388 3.3E-37 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 SUPERFAMILY SSF52172 1 158 1.41E-29 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 Pfam PF00072 Response regulator receiver domain 1 112 3.6E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 SMART SM00448 1 112 1.3E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 Gene3D G3DSA:3.40.50.12740 1 158 7.1E-32 T 17-10-2018 FORC55_3661 a08357bb2cfe40f60be3b0af845b0bd7 565 SMART SM00331 162 377 1.8E-11 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 Gene3D G3DSA:2.40.50.100 33 66 5.9E-6 T 17-10-2018 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 Gene3D G3DSA:1.10.287.470 67 89 5.9E-6 T 17-10-2018 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 Gene3D G3DSA:2.40.30.170 232 307 1.0E-11 T 17-10-2018 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 SUPERFAMILY SSF111369 169 249 7.98E-5 T 17-10-2018 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 Pfam PF13437 HlyD family secretion protein 196 275 3.7E-8 T 17-10-2018 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 Gene3D G3DSA:1.10.287.470 169 196 1.0E-11 T 17-10-2018 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 SUPERFAMILY SSF111369 101 158 1.01E-5 T 17-10-2018 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 Gene3D G3DSA:1.10.287.470 98 162 7.7E-11 T 17-10-2018 FORC55_1181 4ab780617375877d9cf7ebffc6627117 315 Gene3D G3DSA:2.40.50.100 197 231 1.0E-11 T 17-10-2018 FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 Pfam PF00557 Metallopeptidase family M24 12 259 1.9E-52 T 17-10-2018 IPR000994 Peptidase M24 FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 Hamap MF_01974 Methionine aminopeptidase [map]. 3 268 41.665 T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 221 2.9E-15 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-15 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 179 191 2.9E-15 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 SUPERFAMILY SSF55920 3 268 9.55E-88 T 17-10-2018 IPR036005 Creatinase/aminopeptidase-like FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 267 5.8E-90 T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 Gene3D G3DSA:3.90.230.10 1 278 4.7E-105 T 17-10-2018 FORC55_0600 76c9fe79454e2da53afab1f8c695cb66 280 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 185 203 - T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 SUPERFAMILY SSF46785 22 99 2.95E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 Pfam PF03466 LysR substrate binding domain 118 308 1.8E-21 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:3.40.190.10 108 307 7.0E-39 T 17-10-2018 FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:3.40.190.10 187 283 7.0E-39 T 17-10-2018 FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 SUPERFAMILY SSF53850 106 309 1.18E-36 T 17-10-2018 FORC55_0392 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 Pfam PF00072 Response regulator receiver domain 5 114 6.9E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 Gene3D G3DSA:3.40.50.2300 1 134 1.1E-33 T 17-10-2018 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 Pfam PF14532 Sigma-54 interaction domain 140 286 4.8E-15 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 SUPERFAMILY SSF52540 138 344 8.04E-32 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 Gene3D G3DSA:3.40.50.300 137 286 1.1E-29 T 17-10-2018 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 Gene3D G3DSA:1.10.10.60 357 414 1.8E-10 T 17-10-2018 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 SMART SM00448 3 114 4.0E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 SUPERFAMILY SSF52172 4 183 8.54E-36 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 Gene3D G3DSA:1.10.8.60 287 356 1.8E-17 T 17-10-2018 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 SUPERFAMILY SSF46689 359 412 7.62E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 Pfam PF02954 Bacterial regulatory protein, Fis family 370 409 1.4E-7 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_3342 4798a37c12c2c7fdee242f2412fe3c25 420 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 328 337 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 Pfam PF01494 FAD binding domain 6 339 9.9E-70 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 SUPERFAMILY SSF54373 180 265 4.71E-23 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 Gene3D G3DSA:3.30.9.50 74 263 7.1E-90 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 SUPERFAMILY SSF51905 6 345 3.03E-54 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 Gene3D G3DSA:3.40.30.120 376 483 1.4E-11 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 5.1E-39 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 5.1E-39 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 5.1E-39 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 325 5.1E-39 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 5.1E-39 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 5.1E-39 T 17-10-2018 FORC55_0886 b5eca0a2bd85c7e13659262cd67587f8 492 Gene3D G3DSA:3.50.50.60 7 337 7.1E-90 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2658 c21f18297efc90a82ad5219a181f1638 144 Pfam PF00258 Flavodoxin 4 136 2.7E-22 T 17-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 FORC55_2658 c21f18297efc90a82ad5219a181f1638 144 SUPERFAMILY SSF52218 2 144 7.75E-40 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_2658 c21f18297efc90a82ad5219a181f1638 144 Gene3D G3DSA:3.40.50.360 1 144 8.5E-45 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 SUPERFAMILY SSF69279 7 190 1.53E-51 T 17-10-2018 FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 Gene3D G3DSA:3.55.50.10 104 195 2.6E-84 T 17-10-2018 FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 Gene3D G3DSA:2.30.110.50 13 336 2.6E-84 T 17-10-2018 FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 SUPERFAMILY SSF69279 196 370 3.06E-45 T 17-10-2018 FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 Gene3D G3DSA:3.30.1920.30 228 291 2.6E-84 T 17-10-2018 FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 526 7.7E-188 T 17-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 Gene3D G3DSA:2.40.50.230 362 461 8.6E-42 T 17-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 SUPERFAMILY SSF69349 447 628 1.49E-51 T 17-10-2018 FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 7.1E-77 T 17-10-2018 FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 508 8.0E-132 T 17-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein FORC55_2705 c8f8d16329108cc42df2568de4cbf524 700 SUPERFAMILY SSF69255 369 456 5.23E-33 T 17-10-2018 FORC55_2270 a31af05e8bf790b9b0dfc20fecc3ea08 152 Gene3D G3DSA:1.10.10.10 100 148 2.3E-17 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2270 a31af05e8bf790b9b0dfc20fecc3ea08 152 Gene3D G3DSA:1.10.10.10 6 52 3.4E-12 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2270 a31af05e8bf790b9b0dfc20fecc3ea08 152 Gene3D G3DSA:1.10.10.10 55 97 1.4E-11 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2270 a31af05e8bf790b9b0dfc20fecc3ea08 152 Pfam PF02631 RecX family 30 147 8.1E-32 T 17-10-2018 IPR003783 Regulatory protein RecX GO:0006282 FORC55_2270 a31af05e8bf790b9b0dfc20fecc3ea08 152 Hamap MF_01114 Regulatory protein RecX [recX]. 2 152 14.4 T 17-10-2018 IPR003783 Regulatory protein RecX GO:0006282 FORC55_3391 9d441adee2118c6f248a2871c805bb56 247 PIRSF PIRSF039085 4 247 6.8E-88 T 17-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 FORC55_3391 9d441adee2118c6f248a2871c805bb56 247 Gene3D G3DSA:3.40.50.300 3 246 5.8E-72 T 17-10-2018 FORC55_3391 9d441adee2118c6f248a2871c805bb56 247 SUPERFAMILY SSF52540 8 241 1.42E-69 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3391 9d441adee2118c6f248a2871c805bb56 247 Pfam PF00005 ABC transporter 23 175 1.0E-35 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3391 9d441adee2118c6f248a2871c805bb56 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3391 9d441adee2118c6f248a2871c805bb56 247 SMART SM00382 32 223 1.2E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1180 9643aa894f5d4c2627ba3a0264e7077f 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1180 9643aa894f5d4c2627ba3a0264e7077f 308 Pfam PF00005 ABC transporter 22 165 6.0E-36 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1180 9643aa894f5d4c2627ba3a0264e7077f 308 Gene3D G3DSA:3.40.50.300 1 236 2.7E-71 T 17-10-2018 FORC55_1180 9643aa894f5d4c2627ba3a0264e7077f 308 SMART SM00382 30 212 6.1E-16 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1180 9643aa894f5d4c2627ba3a0264e7077f 308 SUPERFAMILY SSF52540 4 227 1.78E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1687 24680d628f81207f37c729b9d43b1cfb 315 PIRSF PIRSF015753 4 312 1.4E-137 T 17-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 FORC55_1687 24680d628f81207f37c729b9d43b1cfb 315 SUPERFAMILY SSF52833 31 150 4.38E-16 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_1687 24680d628f81207f37c729b9d43b1cfb 315 SUPERFAMILY SSF47616 166 313 1.95E-40 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily FORC55_1687 24680d628f81207f37c729b9d43b1cfb 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 3.9E-21 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 FORC55_1687 24680d628f81207f37c729b9d43b1cfb 315 Gene3D G3DSA:1.20.1050.10 170 315 2.1E-72 T 17-10-2018 FORC55_1687 24680d628f81207f37c729b9d43b1cfb 315 Gene3D G3DSA:3.40.30.130 1 169 1.8E-65 T 17-10-2018 FORC55_1687 24680d628f81207f37c729b9d43b1cfb 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 3.8E-13 T 17-10-2018 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 SUPERFAMILY SSF51735 3 259 3.89E-61 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 261 1.7E-111 T 17-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 1.9E-66 T 17-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 238 257 1.9E-66 T 17-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 88 105 1.9E-66 T 17-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 108 128 1.9E-66 T 17-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 212 231 1.9E-66 T 17-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 173 196 1.9E-66 T 17-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 3.2E-49 T 17-10-2018 FORC55_1969 08cd7f08c4cb1d4fe7cafc4930e4823a 262 Gene3D G3DSA:3.40.50.720 1 261 2.0E-62 T 17-10-2018 FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 SUPERFAMILY SSF52833 3 107 3.93E-38 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 Gene3D G3DSA:3.40.30.10 1 108 2.2E-35 T 17-10-2018 FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 Pfam PF00085 Thioredoxin 5 106 1.4E-32 T 17-10-2018 IPR013766 Thioredoxin domain GO:0045454 FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 PIRSF PIRSF000077 2 108 1.4E-42 T 17-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 17-10-2018 FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 17-10-2018 FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 17-10-2018 FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 FORC55_2474 614816fbd4420c03f53a5993dc78116f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.4E-37 T 17-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 FORC55_1023 ff9e677d1c015f769d5b334176416023 303 Gene3D G3DSA:3.40.50.1100 33 136 8.5E-22 T 17-10-2018 FORC55_1023 ff9e677d1c015f769d5b334176416023 303 PIRSF PIRSF006278 4 297 1.7E-18 T 17-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase FORC55_1023 ff9e677d1c015f769d5b334176416023 303 Gene3D G3DSA:3.40.50.1100 13 283 8.5E-22 T 17-10-2018 FORC55_1023 ff9e677d1c015f769d5b334176416023 303 SUPERFAMILY SSF53686 7 294 4.8E-56 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 SUPERFAMILY SSF47781 470 557 3.22E-28 T 17-10-2018 IPR010994 RuvA domain 2-like FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Pfam PF09371 Tex-like protein N-terminal domain 9 193 2.3E-71 T 17-10-2018 IPR018974 Tex-like protein, N-terminal FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 SUPERFAMILY SSF158832 4 321 4.32E-122 T 17-10-2018 FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 SMART SM00732 326 424 1.6E-39 T 17-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 3.6E-29 T 17-10-2018 FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 SUPERFAMILY SSF47781 560 632 1.96E-19 T 17-10-2018 IPR010994 RuvA domain 2-like FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 SUPERFAMILY SSF53098 322 469 4.55E-51 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 SUPERFAMILY SSF50249 638 723 2.83E-24 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Gene3D G3DSA:1.10.10.650 1 109 3.0E-41 T 17-10-2018 IPR023319 Tex-like protein, HTH domain superfamily FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Gene3D G3DSA:2.40.50.140 631 725 1.1E-28 T 17-10-2018 FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Gene3D G3DSA:1.10.3500.10 112 498 2.0E-160 T 17-10-2018 IPR023323 Tex-like domain superfamily FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Gene3D G3DSA:3.30.420.140 325 451 2.0E-160 T 17-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 6.8E-56 T 17-10-2018 IPR032639 Tex protein, YqgF-like domain FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 SMART SM00316 649 720 6.0E-25 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Gene3D G3DSA:1.10.150.310 499 630 2.4E-51 T 17-10-2018 FORC55_0169 b1afab0cfc982da80125ec4ee40e516d 773 Pfam PF00575 S1 RNA binding domain 648 720 2.9E-21 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_0212 e893956987020d5596739a364d7bd125 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.7E-43 T 17-10-2018 FORC55_0212 e893956987020d5596739a364d7bd125 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 17-10-2018 FORC55_0212 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:3.40.50.2300 56 306 5.7E-83 T 17-10-2018 FORC55_0212 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:1.10.260.40 1 55 2.9E-26 T 17-10-2018 FORC55_0212 e893956987020d5596739a364d7bd125 335 SUPERFAMILY SSF53822 60 332 2.94E-91 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_0212 e893956987020d5596739a364d7bd125 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.4E-20 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_0212 e893956987020d5596739a364d7bd125 335 SMART SM00354 1 71 4.8E-33 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_0212 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:3.40.50.2300 160 289 5.7E-83 T 17-10-2018 FORC55_0212 e893956987020d5596739a364d7bd125 335 SUPERFAMILY SSF47413 1 59 2.16E-17 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_3327 a852853d62ead651748d79edcf8dad51 351 Gene3D G3DSA:3.40.50.300 7 224 5.5E-69 T 17-10-2018 FORC55_3327 a852853d62ead651748d79edcf8dad51 351 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3327 a852853d62ead651748d79edcf8dad51 351 Pfam PF08402 TOBE domain 276 345 1.2E-5 T 17-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 FORC55_3327 a852853d62ead651748d79edcf8dad51 351 SMART SM00382 31 214 9.9E-19 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3327 a852853d62ead651748d79edcf8dad51 351 Gene3D G3DSA:2.40.50.140 283 324 5.8E-9 T 17-10-2018 FORC55_3327 a852853d62ead651748d79edcf8dad51 351 Gene3D G3DSA:2.40.50.940 225 282 5.8E-9 T 17-10-2018 FORC55_3327 a852853d62ead651748d79edcf8dad51 351 SUPERFAMILY SSF50331 239 347 2.04E-13 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_3327 a852853d62ead651748d79edcf8dad51 351 SUPERFAMILY SSF52540 7 245 1.18E-85 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3327 a852853d62ead651748d79edcf8dad51 351 Pfam PF00005 ABC transporter 24 164 6.8E-35 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0789 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.4E-69 T 17-10-2018 FORC55_0789 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.4E-69 T 17-10-2018 FORC55_0789 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.4E-69 T 17-10-2018 FORC55_0789 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.4E-69 T 17-10-2018 FORC55_0789 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.4E-69 T 17-10-2018 FORC55_0789 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.4E-69 T 17-10-2018 FORC55_0789 5ad2fb964f726c227430821c144b4957 222 PIRSF PIRSF002764 1 222 3.9E-83 T 17-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria FORC55_0789 5ad2fb964f726c227430821c144b4957 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 9 218 5.2E-91 T 17-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria FORC55_0789 5ad2fb964f726c227430821c144b4957 222 Pfam PF03379 CcmB protein 6 219 5.5E-89 T 17-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_1995 7ae96ec4343379526e856cbf2474cf03 404 SUPERFAMILY SSF53383 5 390 4.3E-115 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1995 7ae96ec4343379526e856cbf2474cf03 404 Gene3D G3DSA:3.40.640.10 16 262 6.9E-167 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1995 7ae96ec4343379526e856cbf2474cf03 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.3E-230 T 17-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 FORC55_1995 7ae96ec4343379526e856cbf2474cf03 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.804 T 17-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 FORC55_1995 7ae96ec4343379526e856cbf2474cf03 404 Gene3D G3DSA:3.90.1150.10 5 375 6.9E-167 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1995 7ae96ec4343379526e856cbf2474cf03 404 Pfam PF00266 Aminotransferase class-V 5 368 3.2E-87 T 17-10-2018 IPR000192 Aminotransferase class V domain FORC55_1995 7ae96ec4343379526e856cbf2474cf03 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 17-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site FORC55_1995 7ae96ec4343379526e856cbf2474cf03 404 PIRSF PIRSF005572 2 384 9.7E-137 T 17-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 FORC55_1983 702f82114389a59c6430ba91187b8c07 412 Pfam PF03129 Anticodon binding domain 326 408 7.3E-12 T 17-10-2018 IPR004154 Anticodon-binding FORC55_1983 702f82114389a59c6430ba91187b8c07 412 PIRSF PIRSF001549 1 411 3.2E-122 T 17-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 FORC55_1983 702f82114389a59c6430ba91187b8c07 412 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 1 400 3.2E-157 T 17-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 FORC55_1983 702f82114389a59c6430ba91187b8c07 412 Pfam PF13393 Histidyl-tRNA synthetase 1 302 4.5E-45 T 17-10-2018 FORC55_1983 702f82114389a59c6430ba91187b8c07 412 SUPERFAMILY SSF55681 1 311 2.99E-103 T 17-10-2018 FORC55_1983 702f82114389a59c6430ba91187b8c07 412 SUPERFAMILY SSF52954 317 409 6.54E-26 T 17-10-2018 FORC55_1983 702f82114389a59c6430ba91187b8c07 412 Gene3D G3DSA:3.40.50.800 316 411 7.0E-26 T 17-10-2018 IPR036621 Anticodon-binding domain superfamily FORC55_1983 702f82114389a59c6430ba91187b8c07 412 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 410 31.872 T 17-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 FORC55_1983 702f82114389a59c6430ba91187b8c07 412 Gene3D G3DSA:3.30.930.10 1 312 2.4E-116 T 17-10-2018 FORC55_2226 865d7b869f756747fde5bf825a6fe297 167 SUPERFAMILY SSF55083 1 159 1.31E-54 T 17-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_2226 865d7b869f756747fde5bf825a6fe297 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 4.6E-37 T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_2226 865d7b869f756747fde5bf825a6fe297 167 Gene3D G3DSA:3.30.70.560 1 159 1.2E-57 T 17-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_2226 865d7b869f756747fde5bf825a6fe297 167 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_2226 865d7b869f756747fde5bf825a6fe297 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.7E-45 T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_2674 806038e607d44e754991b14ef23a41ca 430 SUPERFAMILY SSF116734 4 208 7.03E-29 T 17-10-2018 FORC55_2674 806038e607d44e754991b14ef23a41ca 430 Gene3D G3DSA:3.90.220.20 17 425 3.0E-62 T 17-10-2018 FORC55_2674 806038e607d44e754991b14ef23a41ca 430 Gene3D G3DSA:3.90.220.20 227 374 3.0E-62 T 17-10-2018 FORC55_2674 806038e607d44e754991b14ef23a41ca 430 Gene3D G3DSA:1.10.287.1120 155 421 3.0E-62 T 17-10-2018 FORC55_2674 806038e607d44e754991b14ef23a41ca 430 SUPERFAMILY SSF116734 207 428 1.44E-37 T 17-10-2018 FORC55_2674 806038e607d44e754991b14ef23a41ca 430 Pfam PF01420 Type I restriction modification DNA specificity domain 223 392 9.4E-11 T 17-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 FORC55_2674 806038e607d44e754991b14ef23a41ca 430 Pfam PF01420 Type I restriction modification DNA specificity domain 93 181 1.8E-6 T 17-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 FORC55_0955 4df7ada5e2984e3099bdae7d318759e1 747 Pfam PF03772 Competence protein 208 464 2.4E-58 T 17-10-2018 IPR004477 ComEC/Rec2-related protein FORC55_0955 4df7ada5e2984e3099bdae7d318759e1 747 SMART SM00849 501 684 4.8E-12 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_0955 4df7ada5e2984e3099bdae7d318759e1 747 Pfam PF13567 Domain of unknown function (DUF4131) 21 173 1.3E-11 T 17-10-2018 IPR025405 Domain of unknown function DUF4131 FORC55_0955 4df7ada5e2984e3099bdae7d318759e1 747 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 127 713 3.2E-122 T 17-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 FORC55_0955 4df7ada5e2984e3099bdae7d318759e1 747 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 402 3.9E-25 T 17-10-2018 IPR004477 ComEC/Rec2-related protein FORC55_0955 4df7ada5e2984e3099bdae7d318759e1 747 SUPERFAMILY SSF56281 492 728 2.03E-44 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_0955 4df7ada5e2984e3099bdae7d318759e1 747 Pfam PF00753 Metallo-beta-lactamase superfamily 499 678 9.5E-17 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_0955 4df7ada5e2984e3099bdae7d318759e1 747 Gene3D G3DSA:3.60.15.10 492 724 1.6E-45 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_1417 bfa4cd3663b4f10240b8efe519eeef7c 176 SUPERFAMILY SSF53098 3 175 1.18E-28 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1417 bfa4cd3663b4f10240b8efe519eeef7c 176 Pfam PF00929 Exonuclease 7 171 3.2E-11 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_1417 bfa4cd3663b4f10240b8efe519eeef7c 176 Gene3D G3DSA:3.30.420.10 1 176 3.0E-37 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_1417 bfa4cd3663b4f10240b8efe519eeef7c 176 SMART SM00479 5 176 8.1E-4 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 Gene3D G3DSA:3.40.50.20 19 326 8.5E-83 T 17-10-2018 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 Pfam PF07478 D-ala D-ala ligase C-terminus 126 326 3.4E-54 T 17-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 SUPERFAMILY SSF52440 3 115 8.25E-28 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 Gene3D G3DSA:3.30.1490.20 132 199 8.5E-83 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 PIRSF PIRSF039102 1 334 4.8E-79 T 17-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 SUPERFAMILY SSF56059 116 330 4.09E-43 T 17-10-2018 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 17-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 272 300 - T 17-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 Gene3D G3DSA:3.30.470.20 105 320 8.5E-83 T 17-10-2018 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 329 1.9E-108 T 17-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 Pfam PF01820 D-ala D-ala ligase N-terminus 6 106 1.0E-21 T 17-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_3207 4c2787097547ed1706cdc6c3df69bd7b 334 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 330 33.499 T 17-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_1667 d1d4b8ad21431b536a0742591ba3d23b 287 Pfam PF01435 Peptidase family M48 79 287 9.1E-40 T 17-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 FORC55_1667 d1d4b8ad21431b536a0742591ba3d23b 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.568 T 17-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 FORC55_1667 d1d4b8ad21431b536a0742591ba3d23b 287 Gene3D G3DSA:3.30.2010.10 68 161 4.3E-37 T 17-10-2018 FORC55_3253 12fdea2603c1e95bf186222977c084fd 270 Pfam PF11495 Archaeal transcriptional regulator TrmB 108 210 2.0E-10 T 17-10-2018 IPR021586 Transcription regulator TrmB, C-terminal FORC55_3253 12fdea2603c1e95bf186222977c084fd 270 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 8 74 1.8E-14 T 17-10-2018 IPR002831 Transcription regulator TrmB, N-terminal FORC55_3253 12fdea2603c1e95bf186222977c084fd 270 Gene3D G3DSA:1.10.10.10 2 101 8.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3253 12fdea2603c1e95bf186222977c084fd 270 SUPERFAMILY SSF46785 5 91 8.79E-8 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2603 e709f5814d085d8dd397f0e638be997a 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 17-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 FORC55_2603 e709f5814d085d8dd397f0e638be997a 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.479 T 17-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 FORC55_2603 e709f5814d085d8dd397f0e638be997a 300 Gene3D G3DSA:1.10.8.1080 221 299 1.3E-29 T 17-10-2018 FORC55_2603 e709f5814d085d8dd397f0e638be997a 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 2.3E-129 T 17-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 FORC55_2603 e709f5814d085d8dd397f0e638be997a 300 Pfam PF13580 SIS domain 39 166 3.3E-11 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_2603 e709f5814d085d8dd397f0e638be997a 300 SUPERFAMILY SSF53697 8 250 2.89E-68 T 17-10-2018 FORC55_2603 e709f5814d085d8dd397f0e638be997a 300 Gene3D G3DSA:3.40.50.10490 1 220 1.5E-81 T 17-10-2018 FORC55_2301 229988f5fc1151e181862484e20a8591 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 2.1E-260 T 17-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 FORC55_2301 229988f5fc1151e181862484e20a8591 610 Gene3D G3DSA:3.40.50.10490 448 595 3.9E-145 T 17-10-2018 FORC55_2301 229988f5fc1151e181862484e20a8591 610 Pfam PF13522 Glutamine amidotransferase domain 63 174 5.5E-20 T 17-10-2018 FORC55_2301 229988f5fc1151e181862484e20a8591 610 Pfam PF01380 SIS domain 463 592 8.6E-26 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_2301 229988f5fc1151e181862484e20a8591 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_2301 229988f5fc1151e181862484e20a8591 610 SUPERFAMILY SSF53697 245 610 1.39E-111 T 17-10-2018 FORC55_2301 229988f5fc1151e181862484e20a8591 610 Gene3D G3DSA:3.40.50.10490 249 609 3.9E-145 T 17-10-2018 FORC55_2301 229988f5fc1151e181862484e20a8591 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.445 T 17-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 FORC55_2301 229988f5fc1151e181862484e20a8591 610 SUPERFAMILY SSF56235 2 234 4.55E-75 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_2301 229988f5fc1151e181862484e20a8591 610 Gene3D G3DSA:3.60.20.10 2 241 2.1E-79 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_0288 ef0477152603af29d9249d90f937916d 209 Gene3D G3DSA:2.40.50.620 32 96 8.3E-16 T 17-10-2018 FORC55_0288 ef0477152603af29d9249d90f937916d 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 3.6E-95 T 17-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0288 ef0477152603af29d9249d90f937916d 209 SUPERFAMILY SSF50447 1 208 2.38E-84 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_0288 ef0477152603af29d9249d90f937916d 209 Pfam PF00297 Ribosomal protein L3 67 182 1.0E-15 T 17-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0288 ef0477152603af29d9249d90f937916d 209 Gene3D G3DSA:2.40.30.10 130 209 5.7E-20 T 17-10-2018 FORC55_0288 ef0477152603af29d9249d90f937916d 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.541 T 17-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0288 ef0477152603af29d9249d90f937916d 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 17-10-2018 IPR019926 Ribosomal protein L3, conserved site FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 Pfam PF07840 FadR C-terminal domain 72 274 3.7E-68 T 17-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 SUPERFAMILY SSF48008 79 269 4.71E-56 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 139.566 T 17-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 Gene3D G3DSA:1.20.120.530 149 278 1.2E-26 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 Gene3D G3DSA:1.20.120.530 80 148 1.4E-6 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 4.8E-119 T 17-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 SMART SM00345 12 71 1.6E-22 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 SUPERFAMILY SSF46785 12 74 8.1E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_0936 0eb295c878e6bffb4fb1cd21912e321a 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_1156 188a50fc89630d44309cf6712a819132 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 313 2.7E-40 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1156 188a50fc89630d44309cf6712a819132 320 Gene3D G3DSA:1.10.3720.10 64 306 9.4E-23 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1156 188a50fc89630d44309cf6712a819132 320 SUPERFAMILY SSF161098 69 298 1.18E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1056 5a5531c5e131496979581b297a83977d 82 Gene3D G3DSA:1.10.1660.60 10 82 7.0E-24 T 17-10-2018 IPR038146 Bacteriophage 933W-like, putative excisionase superfamily FORC55_1056 5a5531c5e131496979581b297a83977d 82 Pfam PF06806 Putative excisionase (DUF1233) 12 79 5.6E-20 T 17-10-2018 IPR009634 Putative excisionase FORC55_2420 1d0d4483a7b5a4ff309e9099d76493ce 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.1E-38 T 17-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2420 1d0d4483a7b5a4ff309e9099d76493ce 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.143 T 17-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 FORC55_2420 1d0d4483a7b5a4ff309e9099d76493ce 122 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 17-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 FORC55_2420 1d0d4483a7b5a4ff309e9099d76493ce 122 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-28 T 17-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2420 1d0d4483a7b5a4ff309e9099d76493ce 122 Gene3D G3DSA:3.30.70.60 1 92 3.3E-33 T 17-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 FORC55_2420 1d0d4483a7b5a4ff309e9099d76493ce 122 SUPERFAMILY SSF54995 1 103 1.44E-38 T 17-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1017 04d08d064dd8aaa52a6d92f7cb70b91b 192 Gene3D G3DSA:3.40.50.10610 17 191 4.5E-18 T 17-10-2018 FORC55_1017 04d08d064dd8aaa52a6d92f7cb70b91b 192 SUPERFAMILY SSF159594 25 190 2.88E-34 T 17-10-2018 FORC55_1017 04d08d064dd8aaa52a6d92f7cb70b91b 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 27 185 2.7E-41 T 17-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component FORC55_2963 f262b26805c8082639b4aa303b926be1 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 17-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 FORC55_2963 f262b26805c8082639b4aa303b926be1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.4E-5 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_2963 f262b26805c8082639b4aa303b926be1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.4E-5 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_2963 f262b26805c8082639b4aa303b926be1 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.1E-16 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_2963 f262b26805c8082639b4aa303b926be1 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 3.3E-39 T 17-10-2018 IPR014036 DeoR C-terminal sensor domain FORC55_2963 f262b26805c8082639b4aa303b926be1 251 SUPERFAMILY SSF100950 75 233 1.36E-24 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_2963 f262b26805c8082639b4aa303b926be1 251 SUPERFAMILY SSF46785 5 63 3.87E-13 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2963 f262b26805c8082639b4aa303b926be1 251 SMART SM01134 74 232 9.8E-43 T 17-10-2018 FORC55_2963 f262b26805c8082639b4aa303b926be1 251 Gene3D G3DSA:1.10.10.10 1 63 5.1E-6 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2963 f262b26805c8082639b4aa303b926be1 251 SMART SM00420 6 58 3.8E-16 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_1985 2006a784ea1a9a64eb8c4bd900b0f318 360 Pfam PF13464 Domain of unknown function (DUF4115) 286 359 8.9E-25 T 17-10-2018 IPR025194 Domain of unknown function DUF4115 FORC55_1985 2006a784ea1a9a64eb8c4bd900b0f318 360 SMART SM00530 30 91 0.0031 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_1985 2006a784ea1a9a64eb8c4bd900b0f318 360 Pfam PF13413 Helix-turn-helix domain 31 90 1.0E-17 T 17-10-2018 FORC55_1985 2006a784ea1a9a64eb8c4bd900b0f318 360 Gene3D G3DSA:1.10.260.40 17 126 8.8E-23 T 17-10-2018 FORC55_1985 2006a784ea1a9a64eb8c4bd900b0f318 360 SUPERFAMILY SSF47413 26 96 1.13E-7 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2444 89dc370ea894e17df185a61d8d82bee9 353 Gene3D G3DSA:2.40.50.140 35 101 3.4E-23 T 17-10-2018 FORC55_2444 89dc370ea894e17df185a61d8d82bee9 353 Gene3D G3DSA:1.10.40.50 276 350 2.4E-23 T 17-10-2018 FORC55_2444 89dc370ea894e17df185a61d8d82bee9 353 Pfam PF03193 RsgA GTPase 99 276 2.9E-56 T 17-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 FORC55_2444 89dc370ea894e17df185a61d8d82bee9 353 Gene3D G3DSA:3.40.50.300 102 275 4.6E-50 T 17-10-2018 FORC55_2444 89dc370ea894e17df185a61d8d82bee9 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 334 2.8E-85 T 17-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 FORC55_2444 89dc370ea894e17df185a61d8d82bee9 353 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 340 36.288 T 17-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 FORC55_2444 89dc370ea894e17df185a61d8d82bee9 353 SUPERFAMILY SSF52540 113 338 1.69E-56 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2667 9d8046e6a4e6108531996028517dc0ce 341 PIRSF PIRSF015268 3 341 2.0E-145 T 17-10-2018 IPR011204 Virulence protein RhuM-like FORC55_2667 9d8046e6a4e6108531996028517dc0ce 341 Pfam PF13310 Virulence protein RhuM family 69 319 7.6E-110 T 17-10-2018 IPR011204 Virulence protein RhuM-like FORC55_0810 34910325f7fa64db50d6955074b7a168 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 2.3E-67 T 17-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 FORC55_0810 34910325f7fa64db50d6955074b7a168 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.2E-65 T 17-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 SUPERFAMILY SSF69279 197 370 5.95E-40 T 17-10-2018 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 Gene3D G3DSA:3.55.50.10 104 195 3.0E-82 T 17-10-2018 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 Pfam PF01471 Putative peptidoglycan binding domain 731 773 3.4E-8 T 17-10-2018 IPR002477 Peptidoglycan binding-like FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 SUPERFAMILY SSF69255 369 456 2.62E-33 T 17-10-2018 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 SUPERFAMILY SSF47090 724 800 4.32E-12 T 17-10-2018 IPR036365 PGBD-like superfamily FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 SUPERFAMILY SSF53955 810 1049 9.84E-31 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 508 1.6E-131 T 17-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 Gene3D G3DSA:3.30.1920.30 228 291 3.0E-82 T 17-10-2018 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 Gene3D G3DSA:2.40.50.230 362 461 1.3E-41 T 17-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 SUPERFAMILY SSF69279 6 191 9.07E-50 T 17-10-2018 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 526 1.3E-183 T 17-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 1.2E-71 T 17-10-2018 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 Gene3D G3DSA:1.10.101.10 716 805 1.5E-15 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 SUPERFAMILY SSF69349 447 628 8.63E-46 T 17-10-2018 FORC55_2798 75394c13b89154785fb636c9e807a7a9 1050 Gene3D G3DSA:2.30.110.50 14 336 3.0E-82 T 17-10-2018 FORC55_1503 0d136ec456b6a39b8207089f0e6c579f 545 Gene3D G3DSA:2.60.40.10 446 545 4.6E-9 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1503 0d136ec456b6a39b8207089f0e6c579f 545 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 22 545 56.072 T 17-10-2018 IPR023704 Glucan biosynthesis protein G FORC55_1503 0d136ec456b6a39b8207089f0e6c579f 545 SUPERFAMILY SSF81296 448 544 1.68E-16 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_1503 0d136ec456b6a39b8207089f0e6c579f 545 SUPERFAMILY SSF74650 72 443 3.01E-163 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 FORC55_1503 0d136ec456b6a39b8207089f0e6c579f 545 Gene3D G3DSA:2.70.98.10 71 444 6.3E-165 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 FORC55_1503 0d136ec456b6a39b8207089f0e6c579f 545 PIRSF PIRSF006281 26 545 8.0E-211 T 17-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD FORC55_1503 0d136ec456b6a39b8207089f0e6c579f 545 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 72 543 2.6E-193 T 17-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 Gene3D G3DSA:3.40.50.2300 1 129 1.2E-52 T 17-10-2018 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 17-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 SUPERFAMILY SSF53383 130 562 2.46E-106 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 PIRSF PIRSF009393 1 711 9.5E-288 T 17-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 Gene3D G3DSA:3.90.1150.10 425 594 1.5E-70 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 Gene3D G3DSA:3.90.100.10 595 711 2.5E-44 T 17-10-2018 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 17-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.2E-44 T 17-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 SUPERFAMILY SSF55904 567 708 1.57E-42 T 17-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 Gene3D G3DSA:3.40.640.10 130 424 3.1E-91 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2499 2edd08709a385cc17791e421f2e57d29 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.2E-186 T 17-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 FORC55_1387 83ca79c11b31598fc5e2a5873bf9c7e4 256 Pfam PF11153 Protein of unknown function (DUF2931) 15 240 1.6E-48 T 17-10-2018 IPR021326 Protein of unknown function DUF2931 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 Gene3D G3DSA:2.40.50.140 565 651 9.9E-35 T 17-10-2018 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 SMART SM00357 23 79 3.5E-10 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 6.2E-186 T 17-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 17-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.19 T 17-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 Gene3D G3DSA:2.40.50.140 1 82 8.3E-27 T 17-10-2018 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 SUPERFAMILY SSF50249 9 80 4.37E-14 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 Pfam PF00773 RNB domain 193 521 1.4E-82 T 17-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 Pfam PF00575 S1 RNA binding domain 564 646 7.4E-8 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 SUPERFAMILY SSF50249 568 649 4.39E-18 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 SUPERFAMILY SSF50249 186 563 4.17E-106 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 17-10-2018 IPR022966 Ribonuclease II/R, conserved site FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 SMART SM00955 193 523 4.1E-114 T 17-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 Pfam PF08206 Ribonuclease B OB domain 24 80 9.8E-17 T 17-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 SUPERFAMILY SSF50249 83 173 6.21E-25 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3425 4681a80eb33b142b840fd8beb11307fa 678 Gene3D G3DSA:2.40.50.640 83 157 4.8E-30 T 17-10-2018 FORC55_1978 17f7fd5be0776ab3f9814bdea5953516 77 Gene3D G3DSA:2.10.290.10 1 70 9.1E-28 T 17-10-2018 IPR029037 YfgJ-like FORC55_1978 17f7fd5be0776ab3f9814bdea5953516 77 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 1.0E-30 T 17-10-2018 IPR010807 Protein of unknown function DUF1407 FORC55_1978 17f7fd5be0776ab3f9814bdea5953516 77 SUPERFAMILY SSF161187 1 69 1.09E-26 T 17-10-2018 FORC55_1978 17f7fd5be0776ab3f9814bdea5953516 77 Pfam PF07191 zinc-ribbons 4 67 6.2E-27 T 17-10-2018 IPR010807 Protein of unknown function DUF1407 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 385 38.086 T 17-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 SMART SM00865 207 325 8.0E-56 T 17-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 17-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.8E-36 T 17-10-2018 IPR024757 Cell division protein FtsZ, C-terminal FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 6.4E-136 T 17-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 SUPERFAMILY SSF52490 13 208 6.8E-69 T 17-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 17-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 8.1E-39 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 Gene3D G3DSA:3.40.50.1440 5 220 1.4E-79 T 17-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 SUPERFAMILY SSF55307 204 320 8.93E-43 T 17-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 Gene3D G3DSA:3.30.1330.20 221 327 1.5E-34 T 17-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 SMART SM00864 13 205 4.1E-111 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.7E-52 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.7E-52 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.7E-52 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 FORC55_0476 084b83ff12efebbe332190aa4548c0fa 398 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.7E-52 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 FORC55_1579 78881a7e81a5a41bb902f3a04df3c369 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 42.425 T 17-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1579 78881a7e81a5a41bb902f3a04df3c369 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 24 397 1.9E-169 T 17-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1579 78881a7e81a5a41bb902f3a04df3c369 402 Gene3D G3DSA:3.20.20.140 61 359 5.9E-161 T 17-10-2018 FORC55_1579 78881a7e81a5a41bb902f3a04df3c369 402 Gene3D G3DSA:2.30.40.10 8 396 5.9E-161 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 FORC55_1579 78881a7e81a5a41bb902f3a04df3c369 402 SUPERFAMILY SSF51556 60 356 9.18E-82 T 17-10-2018 IPR032466 Metal-dependent hydrolase FORC55_1579 78881a7e81a5a41bb902f3a04df3c369 402 SUPERFAMILY SSF51338 1 399 2.45E-28 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 FORC55_1579 78881a7e81a5a41bb902f3a04df3c369 402 Pfam PF01979 Amidohydrolase family 57 376 2.9E-15 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 7.3E-7 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 7.3E-7 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 7.3E-7 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-7 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.1E-43 T 17-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.5E-83 T 17-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 Gene3D G3DSA:3.30.300.10 398 517 3.3E-51 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 Pfam PF02540 NAD synthase 212 285 1.7E-7 T 17-10-2018 IPR022310 NAD/GMP synthase FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.8E-6 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.8E-6 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.8E-6 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 Gene3D G3DSA:3.40.50.620 202 397 3.5E-75 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 SUPERFAMILY SSF54810 397 517 3.92E-51 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 SUPERFAMILY SSF52402 189 412 5.51E-58 T 17-10-2018 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 SUPERFAMILY SSF52317 9 200 4.13E-57 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.336 T 17-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.1E-155 T 17-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 Gene3D G3DSA:3.40.50.880 6 201 1.1E-54 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1975 02556115be0539e80c1e8e727b95b1a7 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 2.2E-41 T 17-10-2018 IPR017926 Glutamine amidotransferase FORC55_0905 a942bd80d9288882809ad0f06b611243 433 Gene3D G3DSA:1.10.3120.10 116 417 1.6E-105 T 17-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.3E-43 T 17-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 Gene3D G3DSA:3.30.70.1050 1 115 7.9E-42 T 17-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 2.3E-12 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain FORC55_0905 a942bd80d9288882809ad0f06b611243 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 1.5E-39 T 17-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 SUPERFAMILY SSF54534 90 241 2.75E-36 T 17-10-2018 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 SUPERFAMILY SSF102735 1 130 6.54E-42 T 17-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 TIGRFAM TIGR00115 tig: trigger factor 11 412 9.6E-143 T 17-10-2018 IPR005215 Trigger factor GO:0015031 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 SUPERFAMILY SSF109998 248 430 5.62E-49 T 17-10-2018 IPR027304 Trigger factor/SurA domain superfamily FORC55_0905 a942bd80d9288882809ad0f06b611243 433 PIRSF PIRSF003095 1 432 3.8E-127 T 17-10-2018 IPR005215 Trigger factor GO:0015031 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 Hamap MF_00303 Trigger factor [tig]. 1 418 21.699 T 17-10-2018 IPR005215 Trigger factor GO:0015031 FORC55_0905 a942bd80d9288882809ad0f06b611243 433 Gene3D G3DSA:3.10.50.40 150 246 1.6E-105 T 17-10-2018 FORC55_1148 82a61f1a87c22af74cf523659d57b2bd 578 SUPERFAMILY SSF51445 190 526 2.81E-78 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_1148 82a61f1a87c22af74cf523659d57b2bd 578 Gene3D G3DSA:3.20.20.70 187 494 2.9E-92 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1148 82a61f1a87c22af74cf523659d57b2bd 578 Pfam PF02065 Melibiase 167 351 4.2E-17 T 17-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 FORC55_1587 fd3e5e8ad8324f5ddb9e501ef23eb901 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 2.5E-12 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_1587 fd3e5e8ad8324f5ddb9e501ef23eb901 1011 SUPERFAMILY SSF46548 571 685 1.15E-6 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_1587 fd3e5e8ad8324f5ddb9e501ef23eb901 1011 Gene3D G3DSA:3.30.465.40 16 210 5.9E-47 T 17-10-2018 FORC55_1587 fd3e5e8ad8324f5ddb9e501ef23eb901 1011 Pfam PF01565 FAD binding domain 52 192 1.9E-36 T 17-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 FORC55_1587 fd3e5e8ad8324f5ddb9e501ef23eb901 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_1587 fd3e5e8ad8324f5ddb9e501ef23eb901 1011 SUPERFAMILY SSF55103 252 538 9.97E-53 T 17-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 FORC55_1587 fd3e5e8ad8324f5ddb9e501ef23eb901 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 1.5E-64 T 17-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 FORC55_1587 fd3e5e8ad8324f5ddb9e501ef23eb901 1011 SUPERFAMILY SSF56176 20 277 4.91E-52 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 FORC55_0555 6a757f31bd58c91a3d514ea12450ca24 403 Pfam PF00266 Aminotransferase class-V 24 392 6.5E-155 T 17-10-2018 IPR000192 Aminotransferase class V domain FORC55_0555 6a757f31bd58c91a3d514ea12450ca24 403 Gene3D G3DSA:3.90.1150.10 7 396 1.2E-165 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_0555 6a757f31bd58c91a3d514ea12450ca24 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 7.2E-169 T 17-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 FORC55_0555 6a757f31bd58c91a3d514ea12450ca24 403 Gene3D G3DSA:3.40.640.10 35 295 1.2E-165 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_0555 6a757f31bd58c91a3d514ea12450ca24 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 403 1.7E-157 T 17-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 FORC55_0555 6a757f31bd58c91a3d514ea12450ca24 403 SUPERFAMILY SSF53383 3 400 2.02E-126 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_0555 6a757f31bd58c91a3d514ea12450ca24 403 PIRSF PIRSF005572 21 403 1.2E-55 T 17-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 FORC55_0858 475ce354de3ffca8d3eec71b9154fcc7 185 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 171 1.7E-51 T 17-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria FORC55_0858 475ce354de3ffca8d3eec71b9154fcc7 185 SUPERFAMILY SSF144091 3 173 1.7E-27 T 17-10-2018 FORC55_0858 475ce354de3ffca8d3eec71b9154fcc7 185 Gene3D G3DSA:1.20.1540.10 1 184 1.6E-18 T 17-10-2018 IPR035952 Rhomboid-like superfamily FORC55_0858 475ce354de3ffca8d3eec71b9154fcc7 185 Pfam PF01694 Rhomboid family 33 176 1.1E-14 T 17-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 FORC55_1906 ddce08620f4c76b08ceb8dcb7044cd83 147 Gene3D G3DSA:3.30.700.10 20 145 3.3E-20 T 17-10-2018 FORC55_1906 ddce08620f4c76b08ceb8dcb7044cd83 147 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 126 1.0E-12 T 17-10-2018 IPR031982 Type IV minor pilin ComP FORC55_1906 ddce08620f4c76b08ceb8dcb7044cd83 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1906 ddce08620f4c76b08ceb8dcb7044cd83 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 39 4.2E-9 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1906 ddce08620f4c76b08ceb8dcb7044cd83 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 6.8E-10 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1906 ddce08620f4c76b08ceb8dcb7044cd83 147 SUPERFAMILY SSF54523 19 123 3.45E-19 T 17-10-2018 FORC55_0783 0214e551389172331c74069d94a2c567 377 Pfam PF01339 CheB methylesterase 192 369 1.2E-58 T 17-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 FORC55_0783 0214e551389172331c74069d94a2c567 377 Gene3D G3DSA:3.40.50.2300 2 129 1.4E-31 T 17-10-2018 FORC55_0783 0214e551389172331c74069d94a2c567 377 SMART SM00448 3 126 2.9E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0783 0214e551389172331c74069d94a2c567 377 SUPERFAMILY SSF52172 2 109 1.18E-26 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0783 0214e551389172331c74069d94a2c567 377 Gene3D G3DSA:3.40.50.180 184 373 1.6E-64 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal FORC55_0783 0214e551389172331c74069d94a2c567 377 SUPERFAMILY SSF52738 186 371 1.44E-63 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal FORC55_0783 0214e551389172331c74069d94a2c567 377 Pfam PF00072 Response regulator receiver domain 5 109 3.1E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0783 0214e551389172331c74069d94a2c567 377 PIRSF PIRSF000876 1 375 1.4E-127 T 17-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 FORC55_0783 0214e551389172331c74069d94a2c567 377 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 375 39.0 T 17-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 FORC55_0843 cf2d01a63744a6ce3b7fe34e71d3b0ee 134 Gene3D G3DSA:2.170.150.20 2 134 6.2E-58 T 17-10-2018 FORC55_0843 cf2d01a63744a6ce3b7fe34e71d3b0ee 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 131 3.6E-54 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 FORC55_0843 cf2d01a63744a6ce3b7fe34e71d3b0ee 134 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 35.906 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 FORC55_0843 cf2d01a63744a6ce3b7fe34e71d3b0ee 134 Pfam PF01641 SelR domain 15 132 1.0E-51 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 FORC55_0843 cf2d01a63744a6ce3b7fe34e71d3b0ee 134 SUPERFAMILY SSF51316 9 133 3.19E-55 T 17-10-2018 IPR011057 Mss4-like superfamily FORC55_1819 9a8016edbde14d14fdc985fe2221cf0e 204 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 26.169 T 17-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 FORC55_1819 9a8016edbde14d14fdc985fe2221cf0e 204 Pfam PF04390 Lipopolysaccharide-assembly 49 161 5.3E-10 T 17-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 FORC55_1819 9a8016edbde14d14fdc985fe2221cf0e 204 Gene3D G3DSA:3.30.160.150 21 169 4.2E-48 T 17-10-2018 FORC55_1582 584da6235dc663fb9b8ff5ee0f57475f 511 Gene3D G3DSA:1.10.275.10 2 197 8.3E-72 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal FORC55_1582 584da6235dc663fb9b8ff5ee0f57475f 511 Gene3D G3DSA:1.20.200.10 198 509 1.5E-127 T 17-10-2018 FORC55_1582 584da6235dc663fb9b8ff5ee0f57475f 511 Pfam PF00221 Aromatic amino acid lyase 11 471 1.4E-191 T 17-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 FORC55_1582 584da6235dc663fb9b8ff5ee0f57475f 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 17-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 FORC55_1582 584da6235dc663fb9b8ff5ee0f57475f 511 SUPERFAMILY SSF48557 4 502 2.9E-197 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 FORC55_1582 584da6235dc663fb9b8ff5ee0f57475f 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.701 T 17-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1582 584da6235dc663fb9b8ff5ee0f57475f 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 498 1.0E-215 T 17-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1595 68fe7b67a099b7f451a58d2dfba247a2 368 Gene3D G3DSA:3.30.470.20 129 284 5.7E-40 T 17-10-2018 FORC55_1595 68fe7b67a099b7f451a58d2dfba247a2 368 Gene3D G3DSA:3.30.200.20 12 128 1.1E-24 T 17-10-2018 FORC55_1595 68fe7b67a099b7f451a58d2dfba247a2 368 Pfam PF01259 SAICAR synthetase 22 293 2.3E-48 T 17-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_1595 68fe7b67a099b7f451a58d2dfba247a2 368 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 17-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_1595 68fe7b67a099b7f451a58d2dfba247a2 368 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 8.6E-231 T 17-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 FORC55_1595 68fe7b67a099b7f451a58d2dfba247a2 368 SUPERFAMILY SSF56104 14 344 6.54E-67 T 17-10-2018 FORC55_1595 68fe7b67a099b7f451a58d2dfba247a2 368 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.415 T 17-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 PIRSF PIRSF006092 1 158 3.8E-44 T 17-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 9.4E-25 T 17-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 27.049 T 17-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 17-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 1.7E-72 T 17-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 Gene3D G3DSA:1.10.287.180 1 76 3.5E-30 T 17-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 Gene3D G3DSA:3.10.50.30 77 159 5.8E-31 T 17-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 SUPERFAMILY SSF54534 80 156 6.02E-19 T 17-10-2018 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 SUPERFAMILY SSF46557 3 78 3.92E-26 T 17-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 2.9E-22 T 17-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 17-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 FORC55_0170 142027a6b7f5f19a7f944f779ee38902 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 51.523 T 17-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 Pfam PF00675 Insulinase (Peptidase family M16) 49 168 1.3E-27 T 17-10-2018 IPR011765 Peptidase M16, N-terminal FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 62 85 - T 17-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 Gene3D G3DSA:3.30.830.10 8 251 3.4E-65 T 17-10-2018 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 SUPERFAMILY SSF63411 500 716 3.14E-26 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 SUPERFAMILY SSF63411 299 463 5.24E-14 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 SUPERFAMILY SSF63411 27 250 8.03E-48 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 Gene3D G3DSA:3.30.830.10 257 470 8.5E-12 T 17-10-2018 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 Gene3D G3DSA:3.30.830.10 731 918 4.1E-16 T 17-10-2018 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 Pfam PF05193 Peptidase M16 inactive domain 201 376 1.0E-19 T 17-10-2018 IPR007863 Peptidase M16, C-terminal FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 Pfam PF05193 Peptidase M16 inactive domain 672 847 3.3E-14 T 17-10-2018 IPR007863 Peptidase M16, C-terminal FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 Gene3D G3DSA:3.30.830.10 510 719 8.0E-20 T 17-10-2018 FORC55_1130 ff97fb5d12df5989785dedb17eac12be 922 SUPERFAMILY SSF63411 748 908 3.84E-17 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 8.0E-136 T 17-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 640 8.4E-4 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 9.6E-8 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 SUPERFAMILY SSF101904 499 743 8.76E-53 T 17-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 Gene3D G3DSA:3.30.1360.40 240 333 5.2E-179 T 17-10-2018 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 Gene3D G3DSA:2.120.10.90 502 748 2.7E-16 T 17-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 SMART SM00434 13 463 2.4E-234 T 17-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 SUPERFAMILY SSF56719 33 485 2.09E-155 T 17-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 Gene3D G3DSA:1.10.268.10 371 456 5.2E-179 T 17-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 Gene3D G3DSA:3.90.199.10 34 483 5.2E-179 T 17-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 17-10-2018 FORC55_0445 ca3c832c7717d116bc0246945529ec35 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.88 T 17-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_2730 ed0b4308c2eddec90c3cd96f6d182ce1 252 SUPERFAMILY SSF141371 138 246 4.51E-32 T 17-10-2018 FORC55_2730 ed0b4308c2eddec90c3cd96f6d182ce1 252 Gene3D G3DSA:2.40.10.220 137 252 5.0E-45 T 17-10-2018 FORC55_2730 ed0b4308c2eddec90c3cd96f6d182ce1 252 Pfam PF07238 PilZ domain 134 237 4.8E-12 T 17-10-2018 IPR009875 PilZ domain GO:0035438 FORC55_2730 ed0b4308c2eddec90c3cd96f6d182ce1 252 SUPERFAMILY SSF141371 24 137 5.1E-33 T 17-10-2018 FORC55_2730 ed0b4308c2eddec90c3cd96f6d182ce1 252 Gene3D G3DSA:2.30.110.10 23 136 3.9E-49 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 FORC55_2730 ed0b4308c2eddec90c3cd96f6d182ce1 252 Pfam PF12945 Flagellar protein YcgR 40 127 7.1E-15 T 17-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal FORC55_3238 265170f9e4a44f9f8a53483515f47bbd 335 PIRSF PIRSF002825 5 328 2.4E-77 T 17-10-2018 IPR026045 Ferric binding protein FORC55_3238 265170f9e4a44f9f8a53483515f47bbd 335 SUPERFAMILY SSF53850 23 325 5.02E-61 T 17-10-2018 FORC55_3238 265170f9e4a44f9f8a53483515f47bbd 335 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 7 332 1.1E-151 T 17-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative FORC55_3238 265170f9e4a44f9f8a53483515f47bbd 335 Gene3D G3DSA:3.40.190.10 29 296 7.1E-77 T 17-10-2018 FORC55_3238 265170f9e4a44f9f8a53483515f47bbd 335 Pfam PF13343 Bacterial extracellular solute-binding protein 74 297 1.5E-24 T 17-10-2018 FORC55_3238 265170f9e4a44f9f8a53483515f47bbd 335 Gene3D G3DSA:3.40.190.10 132 309 7.1E-77 T 17-10-2018 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 17-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 SUPERFAMILY SSF46557 2 75 2.88E-25 T 17-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.198 T 17-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 SUPERFAMILY SSF54534 81 156 8.37E-24 T 17-10-2018 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 7.0E-25 T 17-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 8.0E-53 T 17-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 Gene3D G3DSA:1.10.287.180 1 74 3.9E-25 T 17-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 Gene3D G3DSA:3.10.50.30 75 157 4.8E-30 T 17-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 PIRSF PIRSF006092 1 157 8.9E-47 T 17-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 8.7E-27 T 17-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 FORC55_2189 63f12290ad8788ffe5c00e343c4f46d8 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 17-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 Pfam PF02743 Cache domain 54 273 4.2E-23 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 Gene3D G3DSA:3.30.450.20 165 287 1.1E-11 T 17-10-2018 FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 Pfam PF00990 Diguanylate cyclase, GGDEF domain 373 522 6.6E-40 T 17-10-2018 IPR000160 GGDEF domain FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 371 526 2.7E-46 T 17-10-2018 IPR000160 GGDEF domain FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 SUPERFAMILY SSF103190 197 272 2.94E-12 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 SUPERFAMILY SSF55073 377 525 1.8E-42 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 SMART SM00267 361 526 3.3E-49 T 17-10-2018 IPR000160 GGDEF domain FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 Gene3D G3DSA:3.30.70.270 366 528 2.1E-49 T 17-10-2018 FORC55_2095 7e87992f045a72e48d1b4d8e9f836c4c 529 SUPERFAMILY SSF103190 89 189 3.3E-7 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 17-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.018 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 17-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 Gene3D G3DSA:1.10.1390.10 508 548 4.6E-20 T 17-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 SUPERFAMILY SSF53697 6 548 6.12E-227 T 17-10-2018 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 Gene3D G3DSA:3.40.50.10490 13 507 1.1E-244 T 17-10-2018 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 Pfam PF00342 Phosphoglucose isomerase 53 542 2.3E-255 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 Gene3D G3DSA:3.40.50.10490 99 292 1.1E-244 T 17-10-2018 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 8.5E-57 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 8.5E-57 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 8.5E-57 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 8.5E-57 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 8.5E-57 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2412 8e06bc39ad384133865637e2a3fb4e21 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 8.5E-57 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2911 b504d95450e4d86b546fe8e14395ac33 600 Gene3D G3DSA:3.40.50.1390 6 188 3.1E-25 T 17-10-2018 FORC55_2911 b504d95450e4d86b546fe8e14395ac33 600 SMART SM00857 10 181 3.0E-18 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 FORC55_2911 b504d95450e4d86b546fe8e14395ac33 600 Pfam PF13408 Recombinase zinc beta ribbon domain 319 372 6.6E-10 T 17-10-2018 IPR025827 Recombinase zinc beta ribbon domain FORC55_2911 b504d95450e4d86b546fe8e14395ac33 600 Pfam PF00239 Resolvase, N terminal domain 10 180 4.1E-14 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 FORC55_2911 b504d95450e4d86b546fe8e14395ac33 600 SUPERFAMILY SSF53041 10 176 2.22E-11 T 17-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 FORC55_2911 b504d95450e4d86b546fe8e14395ac33 600 Pfam PF07508 Recombinase 207 305 6.5E-10 T 17-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 FORC55_0156 4c271132eb496e41581dac28d302ceb0 194 SUPERFAMILY SSF54523 7 83 7.46E-8 T 17-10-2018 FORC55_0156 4c271132eb496e41581dac28d302ceb0 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 3.9E-22 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 FORC55_0156 4c271132eb496e41581dac28d302ceb0 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 3.9E-22 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 FORC55_0156 4c271132eb496e41581dac28d302ceb0 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 3.9E-22 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 FORC55_0156 4c271132eb496e41581dac28d302ceb0 194 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0156 4c271132eb496e41581dac28d302ceb0 194 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.7E-5 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0156 4c271132eb496e41581dac28d302ceb0 194 Pfam PF12019 Type II transport protein GspH 42 181 3.0E-9 T 17-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 FORC55_0156 4c271132eb496e41581dac28d302ceb0 194 Gene3D G3DSA:3.55.40.10 33 194 1.1E-56 T 17-10-2018 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 3.7E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 1.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 1.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 1.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 1.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SUPERFAMILY SSF47384 270 347 2.35E-16 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Gene3D G3DSA:1.20.120.160 662 783 1.1E-29 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SUPERFAMILY SSF55785 140 267 5.23E-24 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SUPERFAMILY SSF55874 336 507 1.57E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SUPERFAMILY SSF52172 526 646 5.27E-25 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Gene3D G3DSA:3.40.50.2300 514 651 4.7E-27 T 17-10-2018 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Gene3D G3DSA:3.30.450.20 142 272 3.6E-24 T 17-10-2018 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Pfam PF00072 Response regulator receiver domain 529 638 9.7E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Pfam PF00989 PAS fold 157 266 8.3E-17 T 17-10-2018 IPR013767 PAS fold GO:0006355 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SMART SM00448 527 638 1.4E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.7E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SMART SM00388 282 347 6.5E-18 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SMART SM00073 680 777 6.6E-9 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SUPERFAMILY SSF47226 668 779 1.57E-27 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Pfam PF01627 Hpt domain 692 762 7.9E-11 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Gene3D G3DSA:1.10.287.970 1 89 3.2E-38 T 17-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SMART SM00091 155 221 3.7E-8 T 17-10-2018 IPR000014 PAS domain FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Gene3D G3DSA:3.30.565.10 349 511 1.6E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 PIRSF PIRSF003182 1 783 0.0 T 17-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 7.7E-18 T 17-10-2018 IPR000014 PAS domain FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 SMART SM00387 394 510 1.3E-34 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0503 77a7f959cbf03898480f82786d2fab23 785 Gene3D G3DSA:1.10.287.130 273 348 1.7E-19 T 17-10-2018 FORC55_0146 6f490eb1d9e4008ce7a6247a7c3fb738 308 Gene3D G3DSA:3.40.630.30 3 145 5.7E-26 T 17-10-2018 FORC55_0146 6f490eb1d9e4008ce7a6247a7c3fb738 308 Gene3D G3DSA:3.10.129.10 147 298 6.5E-43 T 17-10-2018 FORC55_0146 6f490eb1d9e4008ce7a6247a7c3fb738 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.1E-49 T 17-10-2018 IPR012660 Thioesterase, putative FORC55_0146 6f490eb1d9e4008ce7a6247a7c3fb738 308 Pfam PF13673 Acetyltransferase (GNAT) domain 66 144 4.4E-11 T 17-10-2018 IPR000182 GNAT domain FORC55_0146 6f490eb1d9e4008ce7a6247a7c3fb738 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 1.8E-43 T 17-10-2018 IPR012660 Thioesterase, putative FORC55_0146 6f490eb1d9e4008ce7a6247a7c3fb738 308 SUPERFAMILY SSF54637 154 296 1.79E-38 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_0146 6f490eb1d9e4008ce7a6247a7c3fb738 308 SUPERFAMILY SSF55729 2 149 5.67E-28 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0688 7f8a7a0e63c3892a89498161986517f7 78 SUPERFAMILY SSF64307 4 64 3.53E-13 T 17-10-2018 IPR036868 TusA-like domain superfamily FORC55_0688 7f8a7a0e63c3892a89498161986517f7 78 Pfam PF01206 Sulfurtransferase TusA 5 55 7.5E-13 T 17-10-2018 IPR001455 TusA-like domain FORC55_0688 7f8a7a0e63c3892a89498161986517f7 78 Gene3D G3DSA:3.30.110.40 2 72 2.2E-11 T 17-10-2018 IPR036868 TusA-like domain superfamily FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 45 151 1.2E-48 T 17-10-2018 IPR033414 Periplasmic sensor domain FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 Gene3D G3DSA:1.10.287.130 379 478 2.7E-18 T 17-10-2018 FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 SUPERFAMILY SSF55874 485 636 1.31E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 594 3.0E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 3.0E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 3.0E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 3.0E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 Gene3D G3DSA:3.30.450.20 238 351 1.1E-6 T 17-10-2018 FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 637 1.3E-20 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 SUPERFAMILY SSF47384 396 457 2.55E-5 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 Gene3D G3DSA:3.30.565.10 483 641 2.2E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 SUPERFAMILY SSF55785 238 351 2.62E-5 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2887 dee0220dd875d9be3685ee1f49435a3e 648 SMART SM00387 526 638 5.5E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0775 cbc0a997fcbb4c0eb01a12bb07482755 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 79 2.5E-8 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 FORC55_0775 cbc0a997fcbb4c0eb01a12bb07482755 155 SUPERFAMILY SSF53254 1 142 6.64E-22 T 17-10-2018 IPR029033 Histidine phosphatase superfamily FORC55_0775 cbc0a997fcbb4c0eb01a12bb07482755 155 SMART SM00855 2 117 5.9E-7 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 FORC55_0775 cbc0a997fcbb4c0eb01a12bb07482755 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 155 1.6E-37 T 17-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 FORC55_0775 cbc0a997fcbb4c0eb01a12bb07482755 155 Gene3D G3DSA:3.40.50.1240 1 155 7.3E-35 T 17-10-2018 IPR029033 Histidine phosphatase superfamily FORC55_2435 b187c5873115624e176430261af29f29 395 Gene3D G3DSA:3.30.479.30 115 247 8.6E-22 T 17-10-2018 FORC55_2435 b187c5873115624e176430261af29f29 395 TIGRFAM TIGR01933 hflK: HflK protein 87 347 3.5E-125 T 17-10-2018 IPR010201 HflK GO:0016021 FORC55_2435 b187c5873115624e176430261af29f29 395 SMART SM00244 85 245 1.1E-50 T 17-10-2018 IPR001107 Band 7 domain FORC55_2435 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 92 114 5.7E-7 T 17-10-2018 IPR001972 Stomatin family GO:0016020 FORC55_2435 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 139 160 5.7E-7 T 17-10-2018 IPR001972 Stomatin family GO:0016020 FORC55_2435 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 195 218 5.7E-7 T 17-10-2018 IPR001972 Stomatin family GO:0016020 FORC55_2435 b187c5873115624e176430261af29f29 395 Pfam PF01145 SPFH domain / Band 7 family 89 260 8.5E-30 T 17-10-2018 IPR001107 Band 7 domain FORC55_2435 b187c5873115624e176430261af29f29 395 SUPERFAMILY SSF117892 118 250 3.79E-22 T 17-10-2018 IPR036013 Band 7/SPFH domain superfamily FORC55_2435 b187c5873115624e176430261af29f29 395 Pfam PF12221 Bacterial membrane protein N terminal 1 56 1.8E-15 T 17-10-2018 IPR020980 Menbrane protein HflK, N-terminal FORC55_2371 2e87a72960caa7f0c2485e0db4c55059 166 SUPERFAMILY SSF52972 2 165 1.18E-51 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like FORC55_2371 2e87a72960caa7f0c2485e0db4c55059 166 Hamap MF_00528 Septum formation protein Maf [maf]. 1 166 21.604 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 FORC55_2371 2e87a72960caa7f0c2485e0db4c55059 166 Pfam PF02545 Maf-like protein 2 165 6.1E-51 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 FORC55_2371 2e87a72960caa7f0c2485e0db4c55059 166 Gene3D G3DSA:3.90.950.10 1 166 2.1E-58 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like FORC55_2371 2e87a72960caa7f0c2485e0db4c55059 166 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 163 1.2E-45 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 FORC55_2371 2e87a72960caa7f0c2485e0db4c55059 166 PIRSF PIRSF006305 1 166 7.6E-45 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 FORC55_0686 83a8211ef49fdbdbadc4f2f7c97af1a2 116 Gene3D G3DSA:3.40.30.10 1 116 2.1E-50 T 17-10-2018 FORC55_0686 83a8211ef49fdbdbadc4f2f7c97af1a2 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 3.3E-45 T 17-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 FORC55_0686 83a8211ef49fdbdbadc4f2f7c97af1a2 116 Pfam PF03960 ArsC family 6 115 1.7E-21 T 17-10-2018 IPR006660 Arsenate reductase-like FORC55_0686 83a8211ef49fdbdbadc4f2f7c97af1a2 116 SUPERFAMILY SSF52833 2 116 8.68E-36 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0820 36a0db324e3954158761e8c9fdba0cb1 316 SUPERFAMILY SSF53901 3 315 2.03E-71 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0820 36a0db324e3954158761e8c9fdba0cb1 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.028 T 17-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 FORC55_0820 36a0db324e3954158761e8c9fdba0cb1 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 7.1E-34 T 17-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 FORC55_0820 36a0db324e3954158761e8c9fdba0cb1 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 7.9E-145 T 17-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 FORC55_0820 36a0db324e3954158761e8c9fdba0cb1 316 Gene3D G3DSA:3.40.47.10 1 170 9.3E-78 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0820 36a0db324e3954158761e8c9fdba0cb1 316 Gene3D G3DSA:3.40.47.10 171 316 1.4E-46 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0820 36a0db324e3954158761e8c9fdba0cb1 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.4E-31 T 17-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 FORC55_2046 2f2d24276a6530b9ecf186de1adf36d0 370 Gene3D G3DSA:3.30.420.40 12 364 3.7E-132 T 17-10-2018 FORC55_2046 2f2d24276a6530b9ecf186de1adf36d0 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.697 T 17-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 FORC55_2046 2f2d24276a6530b9ecf186de1adf36d0 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 368 3.8E-178 T 17-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 FORC55_2046 2f2d24276a6530b9ecf186de1adf36d0 370 Gene3D G3DSA:3.30.420.40 146 329 3.7E-132 T 17-10-2018 FORC55_2046 2f2d24276a6530b9ecf186de1adf36d0 370 SUPERFAMILY SSF53067 6 343 9.06E-25 T 17-10-2018 FORC55_0694 6bfa533055c1951adb6f220c8fd6e6a5 180 Gene3D G3DSA:3.30.70.260 1 85 2.8E-26 T 17-10-2018 FORC55_0694 6bfa533055c1951adb6f220c8fd6e6a5 180 SUPERFAMILY SSF55021 87 176 1.33E-21 T 17-10-2018 FORC55_0694 6bfa533055c1951adb6f220c8fd6e6a5 180 SUPERFAMILY SSF55021 1 84 4.58E-18 T 17-10-2018 FORC55_0694 6bfa533055c1951adb6f220c8fd6e6a5 180 Gene3D G3DSA:3.30.70.260 87 180 2.0E-46 T 17-10-2018 FORC55_0694 6bfa533055c1951adb6f220c8fd6e6a5 180 PIRSF PIRSF028103 1 178 3.1E-60 T 17-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 FORC55_0694 6bfa533055c1951adb6f220c8fd6e6a5 180 Pfam PF13740 ACT domain 3 78 8.6E-24 T 17-10-2018 FORC55_3551 4891d206190110fd98bcbd9455db64df 301 SUPERFAMILY SSF46785 4 84 4.36E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3551 4891d206190110fd98bcbd9455db64df 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3551 4891d206190110fd98bcbd9455db64df 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3551 4891d206190110fd98bcbd9455db64df 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3551 4891d206190110fd98bcbd9455db64df 301 Gene3D G3DSA:3.40.190.10 102 289 2.3E-35 T 17-10-2018 FORC55_3551 4891d206190110fd98bcbd9455db64df 301 SUPERFAMILY SSF53850 92 296 5.61E-30 T 17-10-2018 FORC55_3551 4891d206190110fd98bcbd9455db64df 301 Gene3D G3DSA:1.10.10.10 5 88 5.1E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3551 4891d206190110fd98bcbd9455db64df 301 Gene3D G3DSA:3.40.190.10 163 262 2.3E-35 T 17-10-2018 FORC55_3551 4891d206190110fd98bcbd9455db64df 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.1E-21 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3551 4891d206190110fd98bcbd9455db64df 301 Pfam PF03466 LysR substrate binding domain 92 293 2.4E-28 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3362 fd739307eeeeca8ee4ff94fbe8e3ddd0 484 SUPERFAMILY SSF52540 1 240 4.5E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3362 fd739307eeeeca8ee4ff94fbe8e3ddd0 484 Gene3D G3DSA:3.40.50.300 1 244 1.8E-56 T 17-10-2018 FORC55_3362 fd739307eeeeca8ee4ff94fbe8e3ddd0 484 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 251 436 7.6E-57 T 17-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 FORC55_3362 fd739307eeeeca8ee4ff94fbe8e3ddd0 484 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 230 1.3E-21 T 17-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain FORC55_3362 fd739307eeeeca8ee4ff94fbe8e3ddd0 484 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 484 202.763 T 17-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 FORC55_3362 fd739307eeeeca8ee4ff94fbe8e3ddd0 484 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 479 5.4E-158 T 17-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 FORC55_3362 fd739307eeeeca8ee4ff94fbe8e3ddd0 484 SUPERFAMILY SSF52317 191 405 1.92E-37 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_3362 fd739307eeeeca8ee4ff94fbe8e3ddd0 484 Gene3D G3DSA:3.40.50.880 252 410 6.3E-18 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_2895 153a1e6080ca16f31a996718331c3870 741 Pfam PF12563 Hemolytic toxin N terminal 5 187 7.1E-92 T 17-10-2018 IPR022220 Hemolytic toxin, N-terminal FORC55_2895 153a1e6080ca16f31a996718331c3870 741 Gene3D G3DSA:3.30.110.130 46 130 1.3E-38 T 17-10-2018 FORC55_2895 153a1e6080ca16f31a996718331c3870 741 Gene3D G3DSA:2.70.240.20 329 606 1.6E-116 T 17-10-2018 FORC55_2895 153a1e6080ca16f31a996718331c3870 741 Gene3D G3DSA:2.70.240.20 131 326 2.7E-89 T 17-10-2018 FORC55_2895 153a1e6080ca16f31a996718331c3870 741 Pfam PF07968 Leukocidin/Hemolysin toxin family 215 477 4.1E-75 T 17-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 FORC55_2895 153a1e6080ca16f31a996718331c3870 741 SUPERFAMILY SSF56959 278 477 1.8E-5 T 17-10-2018 IPR036435 Leukocidin/porin MspA superfamily FORC55_2895 153a1e6080ca16f31a996718331c3870 741 SMART SM00458 484 599 4.6E-17 T 17-10-2018 IPR000772 Ricin B, lectin domain FORC55_2895 153a1e6080ca16f31a996718331c3870 741 Gene3D G3DSA:2.100.10.30 607 741 2.4E-42 T 17-10-2018 IPR036404 Jacalin-like lectin domain superfamily FORC55_2895 153a1e6080ca16f31a996718331c3870 741 Pfam PF16458 Beta-prism lectin 612 739 1.3E-55 T 17-10-2018 IPR032496 Hemolysin, beta-prism lectin FORC55_2895 153a1e6080ca16f31a996718331c3870 741 SUPERFAMILY SSF50370 486 590 8.29E-14 T 17-10-2018 IPR035992 Ricin B-like lectins FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 SUPERFAMILY SSF50249 68 148 3.06E-13 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 SMART SM00357 87 146 0.001 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 Hamap MF_01895 Ribonuclease R [rnr]. 39 737 50.289 T 17-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 SUPERFAMILY SSF50249 222 654 2.36E-134 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 Pfam PF08461 Ribonuclease R winged-helix domain 24 79 1.6E-4 T 17-10-2018 IPR013668 Ribonuclease R winged-helix domain FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 Pfam PF00773 RNB domain 261 589 1.3E-106 T 17-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 75 735 6.3E-197 T 17-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 Pfam PF00575 S1 RNA binding domain 654 735 4.7E-11 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 SMART SM00316 656 737 3.5E-7 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 Gene3D G3DSA:2.40.50.140 72 148 4.0E-14 T 17-10-2018 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 SUPERFAMILY SSF50249 658 734 3.66E-14 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 736 2.7E-228 T 17-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 ProSitePatterns PS01175 Ribonuclease II family signature. 557 581 - T 17-10-2018 IPR022966 Ribonuclease II/R, conserved site FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 SUPERFAMILY SSF50249 142 237 2.57E-10 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 Gene3D G3DSA:2.40.50.140 653 738 6.2E-13 T 17-10-2018 FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 Pfam PF08206 Ribonuclease B OB domain 88 145 6.4E-14 T 17-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain FORC55_3474 4d8dd92ae1151007a20b4ed6599886ef 738 SMART SM00955 261 590 5.9E-169 T 17-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 FORC55_0585 ee9a5413689872a531e22f4b14002cb2 154 SUPERFAMILY SSF53271 5 147 4.26E-30 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like FORC55_0585 ee9a5413689872a531e22f4b14002cb2 154 Pfam PF00156 Phosphoribosyl transferase domain 27 142 1.2E-15 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 FORC55_0585 ee9a5413689872a531e22f4b14002cb2 154 Gene3D G3DSA:3.40.50.2020 1 152 2.3E-43 T 17-10-2018 FORC55_0585 ee9a5413689872a531e22f4b14002cb2 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 40.038 T 17-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 Pfam PF03466 LysR substrate binding domain 89 287 6.2E-46 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 SUPERFAMILY SSF46785 1 86 4.15E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 Gene3D G3DSA:1.10.10.10 1 83 1.6E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.5E-20 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 Gene3D G3DSA:3.40.190.290 90 289 3.2E-50 T 17-10-2018 FORC55_1218 029cbc112eb9f8749fc2074cc57696fd 289 SUPERFAMILY SSF53850 89 288 1.54E-40 T 17-10-2018 FORC55_2934 63aa2fb180051dfe65d09b0d49f1de42 510 Pfam PF00665 Integrase core domain 140 267 3.3E-16 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 FORC55_2934 63aa2fb180051dfe65d09b0d49f1de42 510 SUPERFAMILY SSF53098 167 300 9.36E-6 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_3108 63aa2fb180051dfe65d09b0d49f1de42 510 Pfam PF00665 Integrase core domain 140 267 3.3E-16 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 FORC55_3108 63aa2fb180051dfe65d09b0d49f1de42 510 SUPERFAMILY SSF53098 167 300 9.36E-6 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_3589 375f3156b4ecaab17c08413f9ba2ff5c 331 Gene3D G3DSA:2.40.160.10 22 331 7.6E-60 T 17-10-2018 IPR023614 Porin domain superfamily FORC55_3589 375f3156b4ecaab17c08413f9ba2ff5c 331 SUPERFAMILY SSF56935 22 331 7.02E-54 T 17-10-2018 FORC55_3589 375f3156b4ecaab17c08413f9ba2ff5c 331 Pfam PF13609 Gram-negative porin 7 307 3.1E-31 T 17-10-2018 FORC55_3139 537de567752655a1e8d1e745498ec356 94 Pfam PF04221 RelB antitoxin 5 73 1.0E-5 T 17-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ FORC55_3139 537de567752655a1e8d1e745498ec356 94 Gene3D G3DSA:1.10.1220.10 2 69 5.9E-6 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 FORC55_1318 8e9cc8d73021647f3bdec4001d098669 158 SUPERFAMILY SSF54637 12 151 2.2E-14 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_1318 8e9cc8d73021647f3bdec4001d098669 158 Gene3D G3DSA:3.10.129.10 5 141 2.5E-22 T 17-10-2018 FORC55_1318 8e9cc8d73021647f3bdec4001d098669 158 Pfam PF14539 Domain of unknown function (DUF4442) 17 102 1.0E-7 T 17-10-2018 IPR027961 Protein of unknown function DUF4442 FORC55_0298 506aca06406bb5a23accfbeabd9dcebe 123 SUPERFAMILY SSF50193 2 122 6.67E-52 T 17-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_0298 506aca06406bb5a23accfbeabd9dcebe 123 Gene3D G3DSA:2.40.150.20 1 123 6.3E-57 T 17-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_0298 506aca06406bb5a23accfbeabd9dcebe 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.738 T 17-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 FORC55_0298 506aca06406bb5a23accfbeabd9dcebe 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 8.6E-59 T 17-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 FORC55_0298 506aca06406bb5a23accfbeabd9dcebe 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.3E-55 T 17-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 FORC55_0298 506aca06406bb5a23accfbeabd9dcebe 123 SMART SM01374 1 123 2.8E-86 T 17-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 FORC55_0298 506aca06406bb5a23accfbeabd9dcebe 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 17-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 PIRSF PIRSF002560 1 157 8.1E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 65 85 7.7E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 23 43 7.7E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 128 149 7.7E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 44 64 7.7E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 107 127 7.7E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 3 22 7.7E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 86 106 7.7E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 3.9E-86 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 Gene3D G3DSA:1.20.1260.10 1 158 1.4E-73 T 17-10-2018 IPR012347 Ferritin-like FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 Pfam PF00210 Ferritin-like domain 8 143 1.5E-40 T 17-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 FORC55_2421 7e11fafe22802b9a59fd7624ef0bfeb2 158 SUPERFAMILY SSF47240 1 153 2.9E-56 T 17-10-2018 IPR009078 Ferritin-like superfamily FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88659 92 162 5.23E-16 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 PIRSF PIRSF000770 3 242 4.5E-36 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 61.592 T 17-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 2.9E-82 T 17-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 1.5E-30 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88659 163 240 5.61E-20 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04539 Sigma-70 region 3 100 172 3.9E-14 T 17-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 Gene3D G3DSA:1.20.140.160 90 239 1.0E-43 T 17-10-2018 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88946 6 91 1.83E-22 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04545 Sigma-70, region 4 187 234 3.2E-18 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04542 Sigma-70 region 2 20 91 3.7E-15 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 Gene3D G3DSA:1.10.1740.10 4 88 3.5E-26 T 17-10-2018 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 7.3E-12 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 7.3E-12 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 7.3E-12 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_0779 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 7.3E-12 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 FORC55_1644 21b42f22a495a8b128075511d5685acd 241 Pfam PF00849 RNA pseudouridylate synthase 66 210 1.0E-14 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1644 21b42f22a495a8b128075511d5685acd 241 Gene3D G3DSA:3.30.70.580 54 129 2.8E-27 T 17-10-2018 FORC55_1644 21b42f22a495a8b128075511d5685acd 241 SUPERFAMILY SSF55120 64 240 5.28E-45 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1644 21b42f22a495a8b128075511d5685acd 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 17-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 FORC55_1644 21b42f22a495a8b128075511d5685acd 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 240 7.6E-59 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 FORC55_1644 21b42f22a495a8b128075511d5685acd 241 Gene3D G3DSA:3.30.70.1560 130 229 2.5E-40 T 17-10-2018 FORC55_3134 4eb74b41ac9ba44f25abc6848dfa3eba 113 SUPERFAMILY SSF50044 63 112 7.61E-6 T 17-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 FORC55_3134 4eb74b41ac9ba44f25abc6848dfa3eba 113 Gene3D G3DSA:2.30.30.40 62 113 3.8E-6 T 17-10-2018 FORC55_3134 4eb74b41ac9ba44f25abc6848dfa3eba 113 PIRSF PIRSF034961 1 113 1.6E-32 T 17-10-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 FORC55_3134 4eb74b41ac9ba44f25abc6848dfa3eba 113 SUPERFAMILY SSF50044 3 65 3.87E-9 T 17-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 FORC55_3134 4eb74b41ac9ba44f25abc6848dfa3eba 113 Pfam PF07653 Variant SH3 domain 3 58 1.5E-7 T 17-10-2018 IPR001452 SH3 domain GO:0005515 FORC55_3134 4eb74b41ac9ba44f25abc6848dfa3eba 113 Gene3D G3DSA:2.30.30.40 1 61 2.1E-5 T 17-10-2018 FORC55_3134 4eb74b41ac9ba44f25abc6848dfa3eba 113 SMART SM00326 62 112 0.6 T 17-10-2018 IPR001452 SH3 domain GO:0005515 FORC55_3134 4eb74b41ac9ba44f25abc6848dfa3eba 113 SMART SM00326 1 59 0.21 T 17-10-2018 IPR001452 SH3 domain GO:0005515 FORC55_2994 4eb74b41ac9ba44f25abc6848dfa3eba 113 SUPERFAMILY SSF50044 63 112 7.61E-6 T 17-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 FORC55_2994 4eb74b41ac9ba44f25abc6848dfa3eba 113 Gene3D G3DSA:2.30.30.40 62 113 3.8E-6 T 17-10-2018 FORC55_2994 4eb74b41ac9ba44f25abc6848dfa3eba 113 PIRSF PIRSF034961 1 113 1.6E-32 T 17-10-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 FORC55_2994 4eb74b41ac9ba44f25abc6848dfa3eba 113 SUPERFAMILY SSF50044 3 65 3.87E-9 T 17-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 FORC55_2994 4eb74b41ac9ba44f25abc6848dfa3eba 113 Pfam PF07653 Variant SH3 domain 3 58 1.5E-7 T 17-10-2018 IPR001452 SH3 domain GO:0005515 FORC55_2994 4eb74b41ac9ba44f25abc6848dfa3eba 113 Gene3D G3DSA:2.30.30.40 1 61 2.1E-5 T 17-10-2018 FORC55_2994 4eb74b41ac9ba44f25abc6848dfa3eba 113 SMART SM00326 62 112 0.6 T 17-10-2018 IPR001452 SH3 domain GO:0005515 FORC55_2994 4eb74b41ac9ba44f25abc6848dfa3eba 113 SMART SM00326 1 59 0.21 T 17-10-2018 IPR001452 SH3 domain GO:0005515 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 1.3E-20 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 1.3E-20 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 1.3E-20 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 1.3E-20 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 1.3E-20 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 Gene3D G3DSA:3.50.50.60 10 366 2.4E-77 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 483 2.6E-10 T 17-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 SUPERFAMILY SSF51905 9 226 9.57E-40 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 536 3.5E-263 T 17-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 Gene3D G3DSA:1.10.10.1100 419 489 1.2E-19 T 17-10-2018 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 Pfam PF01266 FAD dependent oxidoreductase 10 359 2.2E-48 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 SUPERFAMILY SSF54373 226 317 7.06E-12 T 17-10-2018 FORC55_3379 d099ec5b7f9a9444dd2712fc3b11bc7e 547 Gene3D G3DSA:3.30.9.10 86 318 2.4E-77 T 17-10-2018 FORC55_1625 6640fdabba2fda34ff691bf56f71868b 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 409 2.5E-45 T 17-10-2018 IPR010352 Protein of unknown function DUF945 FORC55_0975 896d6cd96a6b9a729319970812271113 246 SUPERFAMILY SSF161098 11 227 1.09E-38 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0975 896d6cd96a6b9a729319970812271113 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 8.1E-21 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_0975 896d6cd96a6b9a729319970812271113 246 Gene3D G3DSA:1.10.3720.10 3 243 1.0E-49 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0975 896d6cd96a6b9a729319970812271113 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 6.7E-16 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 SUPERFAMILY SSF118215 9 407 4.18E-121 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 2.2E-49 T 17-10-2018 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 2.2E-49 T 17-10-2018 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 2.2E-49 T 17-10-2018 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 2.2E-49 T 17-10-2018 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 2.2E-49 T 17-10-2018 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 2.2E-49 T 17-10-2018 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 2.2E-49 T 17-10-2018 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 1.2E-130 T 17-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 FORC55_2765 18a03dd60d36f91f7c21bf8d7a145cae 433 Gene3D G3DSA:1.10.3860.10 1 425 9.2E-141 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 FORC55_0016 10b96479c7343f55fb0f58673f6f16a8 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 17-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_0016 10b96479c7343f55fb0f58673f6f16a8 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 17-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_0016 10b96479c7343f55fb0f58673f6f16a8 613 Pfam PF00920 Dehydratase family 34 604 2.2E-219 T 17-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_0016 10b96479c7343f55fb0f58673f6f16a8 613 SUPERFAMILY SSF52016 421 608 6.43E-61 T 17-10-2018 FORC55_0016 10b96479c7343f55fb0f58673f6f16a8 613 Gene3D G3DSA:3.50.30.80 421 573 3.2E-55 T 17-10-2018 FORC55_0016 10b96479c7343f55fb0f58673f6f16a8 613 SUPERFAMILY SSF143975 3 420 7.06E-135 T 17-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_0016 10b96479c7343f55fb0f58673f6f16a8 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 44.986 T 17-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_0016 10b96479c7343f55fb0f58673f6f16a8 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 8.1E-264 T 17-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_1184 8963359e773eba767ae225b03ceb4126 450 Gene3D G3DSA:3.10.580.10 129 256 1.0E-21 T 17-10-2018 FORC55_1184 8963359e773eba767ae225b03ceb4126 450 SUPERFAMILY SSF158791 20 126 8.37E-6 T 17-10-2018 FORC55_1184 8963359e773eba767ae225b03ceb4126 450 Pfam PF01769 Divalent cation transporter 318 439 2.8E-25 T 17-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 FORC55_1184 8963359e773eba767ae225b03ceb4126 450 SUPERFAMILY SSF161093 275 446 1.03E-47 T 17-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 FORC55_1184 8963359e773eba767ae225b03ceb4126 450 SUPERFAMILY SSF54631 133 270 2.44E-19 T 17-10-2018 FORC55_1184 8963359e773eba767ae225b03ceb4126 450 Pfam PF00571 CBS domain 198 248 0.0027 T 17-10-2018 IPR000644 CBS domain FORC55_1184 8963359e773eba767ae225b03ceb4126 450 TIGRFAM TIGR00400 mgtE: magnesium transporter 41 446 7.9E-70 T 17-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 FORC55_1184 8963359e773eba767ae225b03ceb4126 450 Gene3D G3DSA:1.10.357.20 269 446 1.1E-52 T 17-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain FORC55_1184 8963359e773eba767ae225b03ceb4126 450 SMART SM00116 204 251 7.4E-4 T 17-10-2018 IPR000644 CBS domain FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 Pfam PF01479 S4 domain 4 36 8.2E-10 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 Gene3D G3DSA:3.30.70.580 70 228 3.9E-49 T 17-10-2018 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 17-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 SUPERFAMILY SSF55120 68 236 3.06E-42 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 SMART SM00363 3 73 4.6E-9 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 SUPERFAMILY SSF55174 4 96 3.36E-12 T 17-10-2018 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 1.8E-56 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 Gene3D G3DSA:3.10.290.10 1 60 7.0E-20 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 Pfam PF00849 RNA pseudouridylate synthase 68 154 5.0E-17 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1606 25268b637a7ea64bf314205ab246b7ce 321 Gene3D G3DSA:3.30.70.1560 130 220 3.9E-49 T 17-10-2018 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 SMART SM00448 16 127 3.3E-28 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 Gene3D G3DSA:3.40.50.2300 14 145 7.9E-30 T 17-10-2018 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 SUPERFAMILY SSF52172 16 199 1.42E-37 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 SMART SM00382 175 318 5.8E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 SUPERFAMILY SSF46689 427 475 3.58E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 SUPERFAMILY SSF52540 155 384 6.89E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 Gene3D G3DSA:3.40.50.300 146 325 7.0E-63 T 17-10-2018 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 Pfam PF02954 Bacterial regulatory protein, Fis family 435 475 4.9E-9 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 Pfam PF00072 Response regulator receiver domain 18 128 5.4E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 Gene3D G3DSA:1.10.10.60 428 474 8.1E-13 T 17-10-2018 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 Pfam PF00158 Sigma-54 interaction domain 155 321 1.3E-67 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_1302 6274673650a4cb691eb68b5891a49c32 484 Gene3D G3DSA:1.10.8.60 326 399 2.8E-16 T 17-10-2018 FORC55_0122 1d108e46cb2382293727ec4648742fee 224 SMART SM00382 27 215 1.3E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0122 1d108e46cb2382293727ec4648742fee 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0122 1d108e46cb2382293727ec4648742fee 224 Pfam PF00005 ABC transporter 18 165 6.7E-36 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0122 1d108e46cb2382293727ec4648742fee 224 SUPERFAMILY SSF52540 1 220 4.26E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0122 1d108e46cb2382293727ec4648742fee 224 Gene3D G3DSA:3.40.50.300 1 223 3.5E-62 T 17-10-2018 FORC55_0122 1d108e46cb2382293727ec4648742fee 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.1E-90 T 17-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 FORC55_0205 8dda4ca0fcdd7590b80673761211c313 295 SUPERFAMILY SSF51730 21 293 4.32E-95 T 17-10-2018 IPR029041 FAD-linked oxidoreductase-like FORC55_0205 8dda4ca0fcdd7590b80673761211c313 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 289 2.7E-103 T 17-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 FORC55_0205 8dda4ca0fcdd7590b80673761211c313 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 290 1.8E-100 T 17-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 FORC55_0205 8dda4ca0fcdd7590b80673761211c313 295 Gene3D G3DSA:3.20.20.220 1 295 1.4E-109 T 17-10-2018 FORC55_1163 414dc3f7361f282d4d8695765ef4199b 359 Pfam PF13533 Biotin-lipoyl like 60 103 3.1E-12 T 17-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain FORC55_1163 414dc3f7361f282d4d8695765ef4199b 359 Gene3D G3DSA:1.10.287.470 90 149 7.5E-74 T 17-10-2018 FORC55_1163 414dc3f7361f282d4d8695765ef4199b 359 SUPERFAMILY SSF111369 49 262 9.81E-30 T 17-10-2018 FORC55_1163 414dc3f7361f282d4d8695765ef4199b 359 Gene3D G3DSA:2.40.50.100 56 188 7.5E-74 T 17-10-2018 FORC55_1163 414dc3f7361f282d4d8695765ef4199b 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 352 1.8E-69 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_1163 414dc3f7361f282d4d8695765ef4199b 359 Gene3D G3DSA:2.40.420.20 269 350 7.5E-74 T 17-10-2018 FORC55_1163 414dc3f7361f282d4d8695765ef4199b 359 Pfam PF13437 HlyD family secretion protein 154 252 3.1E-9 T 17-10-2018 FORC55_1163 414dc3f7361f282d4d8695765ef4199b 359 Gene3D G3DSA:2.40.30.170 46 268 7.5E-74 T 17-10-2018 FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 Gene3D G3DSA:2.40.50.100 517 594 1.0E-23 T 17-10-2018 FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 17-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 SUPERFAMILY SSF89000 297 457 3.06E-51 T 17-10-2018 FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 Pfam PF02436 Conserved carboxylase domain 292 494 8.9E-59 T 17-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 590 4.7E-269 T 17-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 Gene3D G3DSA:3.20.20.70 1 463 2.0E-174 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 SUPERFAMILY SSF51230 521 594 2.49E-21 T 17-10-2018 IPR011053 Single hybrid motif FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 Pfam PF00682 HMGL-like 6 270 1.1E-59 T 17-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 Pfam PF00364 Biotin-requiring enzyme 529 593 4.8E-18 T 17-10-2018 IPR000089 Biotin/lipoyl attachment FORC55_2265 69a8f31be20bb1fbf861367d2aa40365 595 SUPERFAMILY SSF51569 1 300 1.63E-88 T 17-10-2018 FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 1.5E-26 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 611 33.904 T 17-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 Gene3D G3DSA:2.40.170.20 155 611 2.8E-120 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 Gene3D G3DSA:2.170.130.10 24 153 5.0E-36 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 SUPERFAMILY SSF56935 29 611 4.88E-108 T 17-10-2018 FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 Pfam PF00593 TonB dependent receptor 224 609 3.4E-42 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 594 611 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 611 9.5E-303 T 17-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 FORC55_0129 786f95c250cd3b94f1853139fa8040cd 611 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 17-10-2018 IPR010916 TonB box, conserved site FORC55_3232 2728633a95615b2ecae4f6633cb8abc4 409 Pfam PF07690 Major Facilitator Superfamily 10 387 3.4E-11 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_3232 2728633a95615b2ecae4f6633cb8abc4 409 Gene3D G3DSA:1.20.1250.20 8 398 3.6E-53 T 17-10-2018 FORC55_3232 2728633a95615b2ecae4f6633cb8abc4 409 SUPERFAMILY SSF103473 7 385 5.49E-16 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 SUPERFAMILY SSF50465 333 434 2.06E-28 T 17-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 1.6E-196 T 17-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 Gene3D G3DSA:2.40.30.10 242 327 5.7E-27 T 17-10-2018 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 226 1.2E-44 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.217 T 17-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 Gene3D G3DSA:2.40.30.10 331 433 3.1E-27 T 17-10-2018 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 213 4.2E-14 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 SUPERFAMILY SSF50447 241 324 4.57E-24 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 Gene3D G3DSA:3.40.50.300 5 239 6.5E-73 T 17-10-2018 FORC55_0325 e52087d3891502ef7a2bb017b104999d 476 SUPERFAMILY SSF52540 22 235 2.58E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0007 fb32afe16bb0ef0fe836abc0569675c5 418 Gene3D G3DSA:3.40.640.10 1 416 2.1E-147 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_0007 fb32afe16bb0ef0fe836abc0569675c5 418 SUPERFAMILY SSF53383 13 411 1.53E-61 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_0007 fb32afe16bb0ef0fe836abc0569675c5 418 Pfam PF00155 Aminotransferase class I and II 68 399 3.0E-26 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.6E-17 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF50465 298 393 2.3E-35 T 17-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:2.40.30.10 207 334 2.1E-51 T 17-10-2018 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 6.1E-233 T 17-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-58 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF52540 6 219 1.77E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-13 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:2.40.30.10 338 393 7.3E-30 T 17-10-2018 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:3.40.50.300 1 203 1.6E-70 T 17-10-2018 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF50447 205 301 1.96E-29 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.753 T 17-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_2463 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.2E-33 T 17-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal FORC55_0367 8657c9c8599e3dea4a8c0618a79ff3df 129 SUPERFAMILY SSF55298 2 128 1.32E-43 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 FORC55_0367 8657c9c8599e3dea4a8c0618a79ff3df 129 Gene3D G3DSA:3.30.1330.40 2 129 1.1E-47 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 FORC55_0367 8657c9c8599e3dea4a8c0618a79ff3df 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 17-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 FORC55_0367 8657c9c8599e3dea4a8c0618a79ff3df 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.7E-43 T 17-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 FORC55_0367 8657c9c8599e3dea4a8c0618a79ff3df 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 5.8E-52 T 17-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Gene3D G3DSA:1.10.1050.10 1 102 8.8E-45 T 17-10-2018 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 9.7E-85 T 17-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Gene3D G3DSA:3.10.290.10 103 191 3.9E-36 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.307 T 17-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SMART SM01390 3 95 6.9E-50 T 17-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.5E-32 T 17-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 17-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SMART SM00363 96 160 9.7E-20 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Pfam PF01479 S4 domain 97 143 4.9E-18 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0312 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SUPERFAMILY SSF55174 3 206 3.01E-72 T 17-10-2018 FORC55_3184 3968d38666e9065242e85f3dbef7781b 188 Pfam PF08274 PhnA Zinc-Ribbon 13 52 3.4E-9 T 17-10-2018 IPR013987 PhnA protein, N-terminal FORC55_3184 3968d38666e9065242e85f3dbef7781b 188 SMART SM00782 6 52 4.9E-28 T 17-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial FORC55_3184 3968d38666e9065242e85f3dbef7781b 188 Pfam PF03831 PhnA domain 123 187 4.3E-25 T 17-10-2018 IPR013988 PhnA protein, C-terminal FORC55_3184 3968d38666e9065242e85f3dbef7781b 188 Gene3D G3DSA:2.30.30.40 119 188 4.5E-26 T 17-10-2018 FORC55_3184 3968d38666e9065242e85f3dbef7781b 188 SUPERFAMILY SSF82057 117 187 1.51E-22 T 17-10-2018 FORC55_2482 b5d38bead82d7e8e5ae94df98cf9d817 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 143 8.0E-67 T 17-10-2018 FORC55_2482 b5d38bead82d7e8e5ae94df98cf9d817 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.3E-67 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 FORC55_2482 b5d38bead82d7e8e5ae94df98cf9d817 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 75.257 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 FORC55_2482 b5d38bead82d7e8e5ae94df98cf9d817 150 SUPERFAMILY SSF52304 6 147 1.24E-62 T 17-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 FORC55_2482 b5d38bead82d7e8e5ae94df98cf9d817 150 PIRSF PIRSF001399 3 149 1.1E-60 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 FORC55_2482 b5d38bead82d7e8e5ae94df98cf9d817 150 Pfam PF01220 Dehydroquinase class II 6 142 1.4E-62 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 FORC55_2482 b5d38bead82d7e8e5ae94df98cf9d817 150 Gene3D G3DSA:3.40.50.9100 1 149 8.2E-67 T 17-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 FORC55_2482 b5d38bead82d7e8e5ae94df98cf9d817 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 17-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 FORC55_0525 dab08d554ad5793bdeb2409360d1e313 207 Pfam PF10144 Bacterial virulence factor haemolysin 6 151 3.6E-44 T 17-10-2018 IPR019305 Uncharacterised protein family Smp FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.3E-37 T 17-10-2018 FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 SMART SM00354 1 71 1.6E-34 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.6E-6 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.6E-6 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.6E-21 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 SUPERFAMILY SSF47413 1 60 4.9E-18 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 Gene3D G3DSA:3.40.50.2300 55 305 3.6E-70 T 17-10-2018 FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 Gene3D G3DSA:1.10.260.40 1 54 4.9E-24 T 17-10-2018 FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 SUPERFAMILY SSF53822 61 331 1.7E-74 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_1270 0376cc9b47632dbe2cd758c273cae2d7 335 Gene3D G3DSA:3.40.50.2300 161 290 3.6E-70 T 17-10-2018 FORC55_2415 b0af886a20220205dbce21aa62eae217 468 SMART SM00382 220 426 0.0082 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2415 b0af886a20220205dbce21aa62eae217 468 Gene3D G3DSA:3.40.50.300 181 460 1.2E-106 T 17-10-2018 FORC55_2415 b0af886a20220205dbce21aa62eae217 468 SUPERFAMILY SSF52540 201 452 2.56E-51 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2415 b0af886a20220205dbce21aa62eae217 468 SUPERFAMILY SSF48024 22 133 4.71E-37 T 17-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 FORC55_2415 b0af886a20220205dbce21aa62eae217 468 Gene3D G3DSA:1.10.860.10 17 180 3.1E-53 T 17-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal FORC55_2415 b0af886a20220205dbce21aa62eae217 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 2.8E-113 T 17-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 FORC55_2415 b0af886a20220205dbce21aa62eae217 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 3.0E-175 T 17-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 FORC55_2415 b0af886a20220205dbce21aa62eae217 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.0E-35 T 17-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 FORC55_1784 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:3.30.420.40 207 376 9.2E-95 T 17-10-2018 FORC55_1784 4f9dacd0d19dab6e340511cb67511154 404 Pfam PF00480 ROK family 86 390 1.0E-74 T 17-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_1784 4f9dacd0d19dab6e340511cb67511154 404 SUPERFAMILY SSF46785 11 75 5.65E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1784 4f9dacd0d19dab6e340511cb67511154 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 17-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_1784 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1784 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:3.30.420.40 90 384 9.2E-95 T 17-10-2018 FORC55_1784 4f9dacd0d19dab6e340511cb67511154 404 SUPERFAMILY SSF53067 85 391 3.19E-55 T 17-10-2018 FORC55_1889 d6940b1017aff728894d3e27b4aaf05d 528 Pfam PF03806 AbgT putative transporter family 19 526 1.8E-231 T 17-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 FORC55_0321 2934b68a206eecca36a7950f06e613c4 189 Gene3D G3DSA:2.60.120.10 2 140 3.4E-15 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_0321 2934b68a206eecca36a7950f06e613c4 189 SUPERFAMILY SSF51206 15 137 3.27E-15 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_0841 accff77904295440f92806f598ed8b63 296 PIRSF PIRSF016020 3 296 1.4E-65 T 17-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 FORC55_0841 accff77904295440f92806f598ed8b63 296 Pfam PF01263 Aldose 1-epimerase 27 292 1.2E-54 T 17-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 FORC55_0841 accff77904295440f92806f598ed8b63 296 SUPERFAMILY SSF74650 6 288 6.03E-76 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 FORC55_0841 accff77904295440f92806f598ed8b63 296 Gene3D G3DSA:2.70.98.10 1 295 1.8E-89 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 FORC55_1408 d14e83ea6b95ef03f1e74f0feab8a1c1 305 Gene3D G3DSA:1.10.10.10 1 88 2.1E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1408 d14e83ea6b95ef03f1e74f0feab8a1c1 305 SUPERFAMILY SSF46785 1 108 1.7E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1408 d14e83ea6b95ef03f1e74f0feab8a1c1 305 SUPERFAMILY SSF53850 89 297 1.81E-37 T 17-10-2018 FORC55_1408 d14e83ea6b95ef03f1e74f0feab8a1c1 305 Pfam PF03466 LysR substrate binding domain 89 294 3.7E-39 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_1408 d14e83ea6b95ef03f1e74f0feab8a1c1 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.6E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1408 d14e83ea6b95ef03f1e74f0feab8a1c1 305 Gene3D G3DSA:3.40.190.290 91 294 1.0E-52 T 17-10-2018 FORC55_0179 301b62565f878ada5cedb2e1ea5246f2 404 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 1 383 2.0E-109 T 17-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 FORC55_0179 301b62565f878ada5cedb2e1ea5246f2 404 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 301 321 - T 17-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 FORC55_0179 301b62565f878ada5cedb2e1ea5246f2 404 Pfam PF00860 Permease family 1 353 1.1E-84 T 17-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 SUPERFAMILY SSF52540 1 641 4.49E-163 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.743 T 17-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 Gene3D G3DSA:3.40.50.300 4 266 2.1E-99 T 17-10-2018 FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 Gene3D G3DSA:3.40.50.300 274 634 1.1E-123 T 17-10-2018 FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.1E-77 T 17-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 17-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 Gene3D G3DSA:1.10.10.160 108 181 2.1E-99 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 Gene3D G3DSA:1.10.486.10 377 546 1.1E-123 T 17-10-2018 FORC55_2629 16c44d25802ccf82b5cb3c01c349e372 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 4.1E-74 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Pfam PF01627 Hpt domain 824 910 1.6E-10 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 460 2.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 2.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 2.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 2.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SUPERFAMILY SSF55874 333 506 1.83E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SMART SM00448 654 767 7.2E-35 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SMART SM00388 279 344 2.5E-24 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SUPERFAMILY SSF52172 521 634 1.42E-6 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SMART SM00073 818 912 0.0099 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SUPERFAMILY SSF52172 654 775 1.37E-36 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Gene3D G3DSA:1.20.120.160 801 916 5.4E-29 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SUPERFAMILY SSF47384 264 345 1.47E-22 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 506 1.4E-29 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 21 164 2.7E-52 T 17-10-2018 IPR019247 Histidine kinase BarA, N-terminal FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Gene3D G3DSA:3.40.50.2300 655 784 5.9E-39 T 17-10-2018 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Pfam PF00072 Response regulator receiver domain 656 765 1.2E-28 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SUPERFAMILY SSF158472 189 236 8.37E-7 T 17-10-2018 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Gene3D G3DSA:1.20.1480.50 153 259 6.0E-8 T 17-10-2018 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Pfam PF00512 His Kinase A (phospho-acceptor) domain 280 344 1.5E-20 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SMART SM00304 187 239 6.2E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SUPERFAMILY SSF47226 750 907 1.83E-19 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Gene3D G3DSA:3.30.565.10 346 509 9.8E-51 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 Gene3D G3DSA:1.10.287.130 266 345 9.8E-27 T 17-10-2018 FORC55_0423 17631ce9e50cb339ccec5b0ea38fdd1f 916 SMART SM00387 391 507 1.4E-37 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Gene3D G3DSA:1.10.260.40 1 55 1.1E-21 T 17-10-2018 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Gene3D G3DSA:3.40.50.2300 56 305 9.8E-74 T 17-10-2018 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 17-10-2018 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.2E-18 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Gene3D G3DSA:3.40.50.2300 160 289 9.8E-74 T 17-10-2018 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-7 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-7 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Pfam PF13377 Periplasmic binding protein-like domain 169 329 2.0E-37 T 17-10-2018 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 SUPERFAMILY SSF47413 1 60 2.16E-16 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 SMART SM00354 1 71 2.7E-34 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_0534 d685dd97f7fff4c7ee8299c4fb7e0f40 335 SUPERFAMILY SSF53822 61 331 2.16E-81 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_0625 ef962eddc987637d306278f15d6e5810 243 Pfam PF08241 Methyltransferase domain 70 125 1.4E-8 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 FORC55_0625 ef962eddc987637d306278f15d6e5810 243 SUPERFAMILY SSF53335 71 212 6.04E-20 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0625 ef962eddc987637d306278f15d6e5810 243 Gene3D G3DSA:3.40.50.150 52 199 8.5E-13 T 17-10-2018 FORC55_1529 b35130bfe6687f6c69188b06762b0d09 440 SUPERFAMILY SSF53098 103 419 2.96E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1529 b35130bfe6687f6c69188b06762b0d09 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.1E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_1529 b35130bfe6687f6c69188b06762b0d09 440 Pfam PF01609 Transposase DDE domain 129 350 6.4E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_3624 b35130bfe6687f6c69188b06762b0d09 440 SUPERFAMILY SSF53098 103 419 2.96E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_3624 b35130bfe6687f6c69188b06762b0d09 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.1E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_3624 b35130bfe6687f6c69188b06762b0d09 440 Pfam PF01609 Transposase DDE domain 129 350 6.4E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_2866 b35130bfe6687f6c69188b06762b0d09 440 SUPERFAMILY SSF53098 103 419 2.96E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2866 b35130bfe6687f6c69188b06762b0d09 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.1E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_2866 b35130bfe6687f6c69188b06762b0d09 440 Pfam PF01609 Transposase DDE domain 129 350 6.4E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_2251 b35130bfe6687f6c69188b06762b0d09 440 SUPERFAMILY SSF53098 103 419 2.96E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2251 b35130bfe6687f6c69188b06762b0d09 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.1E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_2251 b35130bfe6687f6c69188b06762b0d09 440 Pfam PF01609 Transposase DDE domain 129 350 6.4E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_2373 583c4940b07c78bbedbffd8747a374ee 296 Gene3D G3DSA:2.40.10.350 180 257 5.3E-35 T 17-10-2018 FORC55_2373 583c4940b07c78bbedbffd8747a374ee 296 Pfam PF04085 rod shape-determining protein MreC 123 269 3.1E-39 T 17-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 FORC55_2373 583c4940b07c78bbedbffd8747a374ee 296 Gene3D G3DSA:2.40.10.340 122 266 5.3E-35 T 17-10-2018 FORC55_2373 583c4940b07c78bbedbffd8747a374ee 296 PIRSF PIRSF038471 2 283 1.4E-78 T 17-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 FORC55_2373 583c4940b07c78bbedbffd8747a374ee 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 273 2.9E-83 T 17-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 FORC55_1138 9313200bda0b4a6df7948b9344370613 181 Pfam PF04279 Intracellular septation protein A 1 174 6.2E-69 T 17-10-2018 IPR006008 Intracellular septation protein A GO:0016021 FORC55_1138 9313200bda0b4a6df7948b9344370613 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 1.7E-64 T 17-10-2018 IPR006008 Intracellular septation protein A GO:0016021 FORC55_1138 9313200bda0b4a6df7948b9344370613 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.531 T 17-10-2018 IPR006008 Intracellular septation protein A GO:0016021 FORC55_0786 963fd4f4906b6e2654e4adaa82215daf 164 SMART SM00260 16 153 2.2E-49 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0786 963fd4f4906b6e2654e4adaa82215daf 164 Pfam PF01584 CheW-like domain 20 156 1.2E-39 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0786 963fd4f4906b6e2654e4adaa82215daf 164 Gene3D G3DSA:2.40.50.180 39 148 5.2E-43 T 17-10-2018 FORC55_0786 963fd4f4906b6e2654e4adaa82215daf 164 SUPERFAMILY SSF50341 14 158 2.35E-41 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_0786 963fd4f4906b6e2654e4adaa82215daf 164 Gene3D G3DSA:2.30.30.40 22 147 5.2E-43 T 17-10-2018 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 4.0E-50 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 4.0E-50 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 4.0E-50 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.0E-50 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.0E-50 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.401 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 9.5E-59 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 SUPERFAMILY SSF52374 8 162 7.78E-45 T 17-10-2018 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 Pfam PF01467 Cytidylyltransferase-like 10 138 9.5E-21 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 Gene3D G3DSA:3.40.50.620 1 164 8.8E-55 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2560 633876b22a0bcfce63db5eb164d69e62 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 68 7.3E-21 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 FORC55_2196 a4e1198f969e50d27ab790fe42e40822 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.554 T 17-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 FORC55_2196 a4e1198f969e50d27ab790fe42e40822 113 SUPERFAMILY SSF89360 7 99 3.92E-30 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 FORC55_2196 a4e1198f969e50d27ab790fe42e40822 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 3.7E-37 T 17-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 FORC55_2196 a4e1198f969e50d27ab790fe42e40822 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 4.8E-19 T 17-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 FORC55_2196 a4e1198f969e50d27ab790fe42e40822 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 17-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 FORC55_2196 a4e1198f969e50d27ab790fe42e40822 113 Gene3D G3DSA:2.60.300.12 8 103 1.8E-32 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 FORC55_2884 a1168fecb45b46bd0046dc20def255ad 276 Pfam PF02540 NAD synthase 21 270 1.2E-61 T 17-10-2018 IPR022310 NAD/GMP synthase FORC55_2884 a1168fecb45b46bd0046dc20def255ad 276 SUPERFAMILY SSF52402 2 276 4.68E-80 T 17-10-2018 FORC55_2884 a1168fecb45b46bd0046dc20def255ad 276 Gene3D G3DSA:3.40.50.620 1 276 3.1E-83 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2884 a1168fecb45b46bd0046dc20def255ad 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 44.97 T 17-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 FORC55_2884 a1168fecb45b46bd0046dc20def255ad 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 19 272 4.0E-63 T 17-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 FORC55_2637 b9a208ddf513420bd77671c793474659 174 Gene3D G3DSA:3.40.50.360 1 117 1.2E-12 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_2637 b9a208ddf513420bd77671c793474659 174 SUPERFAMILY SSF52218 2 173 5.12E-32 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_2637 b9a208ddf513420bd77671c793474659 174 Pfam PF12724 Flavodoxin domain 4 152 3.0E-49 T 17-10-2018 IPR026816 Flavodoxin domain FORC55_2188 63851d7bfeb3e2b93d8f50ec9992bfb1 98 SMART SM01103 3 86 3.0E-40 T 17-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 FORC55_2188 63851d7bfeb3e2b93d8f50ec9992bfb1 98 Gene3D G3DSA:3.30.110.60 1 98 2.1E-36 T 17-10-2018 IPR035920 YhbY-like superfamily FORC55_2188 63851d7bfeb3e2b93d8f50ec9992bfb1 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 17-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 FORC55_2188 63851d7bfeb3e2b93d8f50ec9992bfb1 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 17-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 FORC55_2188 63851d7bfeb3e2b93d8f50ec9992bfb1 98 SUPERFAMILY SSF75471 1 94 3.4E-30 T 17-10-2018 IPR035920 YhbY-like superfamily FORC55_2188 63851d7bfeb3e2b93d8f50ec9992bfb1 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 7.0E-21 T 17-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 Pfam PF05547 Immune inhibitor A peptidase M6 105 747 0.0 T 17-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 SUPERFAMILY SSF49299 756 837 1.57E-21 T 17-10-2018 IPR035986 PKD domain superfamily FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 Pfam PF00801 PKD domain 772 827 2.4E-12 T 17-10-2018 IPR000601 PKD domain FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 Pfam PF00801 PKD domain 843 911 6.9E-10 T 17-10-2018 IPR000601 PKD domain FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 SUPERFAMILY SSF49299 838 916 8.89E-10 T 17-10-2018 IPR035986 PKD domain superfamily FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 121 444 6.4E-86 T 17-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 PIRSF PIRSF007519 1 767 0.0 T 17-10-2018 IPR012300 Peptidase M6, InhA FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 SMART SM00089 841 917 2.6E-13 T 17-10-2018 IPR022409 PKD/Chitinase domain FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 SMART SM00089 760 838 3.9E-24 T 17-10-2018 IPR022409 PKD/Chitinase domain FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 Gene3D G3DSA:2.60.40.10 753 838 3.0E-36 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 Gene3D G3DSA:2.60.40.10 839 918 7.6E-8 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2899 a13283dd3cd0128a1cabe8eccebd8047 918 SUPERFAMILY SSF55486 212 385 1.18E-19 T 17-10-2018 FORC55_0984 f36e8db097b6a39a2c8eb461eaa72c2d 215 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 213 23.739 T 17-10-2018 IPR018635 Uncharacterised protein family UPF0319 FORC55_0984 f36e8db097b6a39a2c8eb461eaa72c2d 215 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 25 210 1.1E-43 T 17-10-2018 IPR018635 Uncharacterised protein family UPF0319 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 SUPERFAMILY SSF53328 82 276 2.35E-59 T 17-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 SUPERFAMILY SSF55021 4 55 7.08E-9 T 17-10-2018 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 Gene3D G3DSA:3.30.70.260 1 76 2.6E-15 T 17-10-2018 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.86 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 4.0E-66 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 4.0E-66 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 4.0E-66 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 4.0E-66 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 4.0E-66 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 4.0E-66 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 Pfam PF01842 ACT domain 5 64 7.2E-8 T 17-10-2018 IPR002912 ACT domain FORC55_0849 b08eb57313acba2479ff74153b57181a 277 PIRSF PIRSF036480 1 277 1.9E-110 T 17-10-2018 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 Pfam PF00551 Formyl transferase 82 259 1.9E-49 T 17-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 Gene3D G3DSA:3.40.50.170 82 277 1.9E-66 T 17-10-2018 FORC55_0849 b08eb57313acba2479ff74153b57181a 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 4.6E-123 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 FORC55_3506 65610f18aa46a497f1266cabd6b861f8 153 SUPERFAMILY SSF46689 1 74 1.9E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3506 65610f18aa46a497f1266cabd6b861f8 153 Gene3D G3DSA:1.10.357.10 1 153 2.7E-61 T 17-10-2018 FORC55_3506 65610f18aa46a497f1266cabd6b861f8 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.1E-4 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1042 fb74a6cd9799d08a951e87a007023e67 220 Hamap MF_01150 Chaperone protein TorD [torD]. 4 212 33.973 T 17-10-2018 IPR023069 Chaperone TorD FORC55_1042 fb74a6cd9799d08a951e87a007023e67 220 Pfam PF02613 Nitrate reductase delta subunit 51 183 7.1E-40 T 17-10-2018 IPR020945 DMSO/Nitrate reductase chaperone FORC55_1042 fb74a6cd9799d08a951e87a007023e67 220 SUPERFAMILY SSF89155 9 215 9.16E-52 T 17-10-2018 IPR036411 TorD-like superfamily FORC55_1042 fb74a6cd9799d08a951e87a007023e67 220 Gene3D G3DSA:1.20.1280.20 129 220 2.7E-26 T 17-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 FORC55_1042 fb74a6cd9799d08a951e87a007023e67 220 Gene3D G3DSA:1.20.120.1820 4 126 1.3E-40 T 17-10-2018 FORC55_1550 18072186bfbcfa5532021c6439a289be 200 SUPERFAMILY SSF53254 1 195 6.64E-33 T 17-10-2018 IPR029033 Histidine phosphatase superfamily FORC55_1550 18072186bfbcfa5532021c6439a289be 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 1.6E-31 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 FORC55_1550 18072186bfbcfa5532021c6439a289be 200 SMART SM00855 3 151 1.6E-8 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 FORC55_1550 18072186bfbcfa5532021c6439a289be 200 Gene3D G3DSA:3.40.50.1240 1 200 4.8E-45 T 17-10-2018 IPR029033 Histidine phosphatase superfamily FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 Pfam PF08402 TOBE domain 286 365 5.1E-12 T 17-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 Pfam PF00005 ABC transporter 29 168 1.0E-35 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 Gene3D G3DSA:3.40.50.300 11 229 5.8E-70 T 17-10-2018 FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 Gene3D G3DSA:2.40.50.140 293 310 3.8E-11 T 17-10-2018 FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 365 3.0E-157 T 17-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 SUPERFAMILY SSF52540 12 251 4.5E-88 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 SUPERFAMILY SSF50331 244 357 3.17E-9 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 SMART SM00382 36 219 5.2E-20 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 Gene3D G3DSA:2.40.50.940 230 292 3.8E-11 T 17-10-2018 FORC55_1378 37f24e95f1203ff96d0d5f7961d6825b 371 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3226 f443ae2b5f5a8fed42aa13a1e58f3938 460 SUPERFAMILY SSF53850 5 448 1.9E-96 T 17-10-2018 FORC55_3226 f443ae2b5f5a8fed42aa13a1e58f3938 460 Gene3D G3DSA:3.40.190.10 2 163 1.9E-27 T 17-10-2018 FORC55_3226 f443ae2b5f5a8fed42aa13a1e58f3938 460 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 11 363 1.2E-66 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_3226 f443ae2b5f5a8fed42aa13a1e58f3938 460 PIRSF PIRSF002741 1 451 6.4E-99 T 17-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 FORC55_3226 f443ae2b5f5a8fed42aa13a1e58f3938 460 Gene3D G3DSA:3.10.105.10 164 418 4.1E-72 T 17-10-2018 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 Pfam PF01202 Shikimate kinase 13 169 3.6E-57 T 17-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 Gene3D G3DSA:3.40.50.300 1 172 1.4E-56 T 17-10-2018 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 98 115 4.0E-29 T 17-10-2018 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 7 22 4.0E-29 T 17-10-2018 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 77 86 4.0E-29 T 17-10-2018 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 31 44 4.0E-29 T 17-10-2018 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 59 67 4.0E-29 T 17-10-2018 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 17-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 SUPERFAMILY SSF52540 4 169 8.2E-33 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0255 6f362c66fdc890e5507664224a9f1b23 174 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.772 T 17-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 FORC55_1177 bf2b6254c3c6461016d4de84096ad008 88 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 4.1E-19 T 17-10-2018 IPR010710 Protein of unknown function DUF1289 FORC55_2345 85be7aba581218e67532f22a42dcc824 271 Gene3D G3DSA:3.40.50.150 1 198 7.9E-66 T 17-10-2018 FORC55_2345 85be7aba581218e67532f22a42dcc824 271 SMART SM00650 25 197 1.7E-89 T 17-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 FORC55_2345 85be7aba581218e67532f22a42dcc824 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 17-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 FORC55_2345 85be7aba581218e67532f22a42dcc824 271 Gene3D G3DSA:1.10.8.100 200 266 9.3E-24 T 17-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 FORC55_2345 85be7aba581218e67532f22a42dcc824 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 2.3E-86 T 17-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 FORC55_2345 85be7aba581218e67532f22a42dcc824 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.374 T 17-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 FORC55_2345 85be7aba581218e67532f22a42dcc824 271 SUPERFAMILY SSF53335 8 264 2.57E-80 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2345 85be7aba581218e67532f22a42dcc824 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 263 3.3E-76 T 17-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm FORC55_2438 3d4981bc19ea8ee941fc4c0cce944920 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 1.4E-116 T 17-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 FORC55_2438 3d4981bc19ea8ee941fc4c0cce944920 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.215 T 17-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 FORC55_2438 3d4981bc19ea8ee941fc4c0cce944920 315 Pfam PF01715 IPP transferase 42 287 1.7E-85 T 17-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 FORC55_2438 3d4981bc19ea8ee941fc4c0cce944920 315 Gene3D G3DSA:3.40.50.300 12 292 1.8E-106 T 17-10-2018 FORC55_2438 3d4981bc19ea8ee941fc4c0cce944920 315 SUPERFAMILY SSF52540 10 153 2.37E-18 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2438 3d4981bc19ea8ee941fc4c0cce944920 315 Gene3D G3DSA:1.10.20.140 115 186 1.8E-106 T 17-10-2018 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 SUPERFAMILY SSF50447 262 399 2.43E-32 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Gene3D G3DSA:3.30.230.10 481 684 1.5E-84 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 SUPERFAMILY SSF54980 401 478 1.8E-20 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 277 4.9E-60 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Pfam PF14492 Elongation Factor G, domain II 401 474 8.5E-29 T 17-10-2018 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 1.6E-26 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 SUPERFAMILY SSF52540 3 278 1.38E-99 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 SUPERFAMILY SSF54980 600 689 1.58E-29 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 SMART SM00838 597 684 3.2E-47 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 103.21 T 17-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 4.1E-17 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 SMART SM00889 477 595 2.6E-60 T 17-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 6.9E-296 T 17-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Gene3D G3DSA:3.30.70.870 430 480 2.0E-20 T 17-10-2018 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Gene3D G3DSA:3.30.70.240 601 671 1.5E-84 T 17-10-2018 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Gene3D G3DSA:2.40.30.10 292 413 3.3E-43 T 17-10-2018 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Gene3D G3DSA:3.40.50.300 1 291 3.5E-102 T 17-10-2018 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Pfam PF03764 Elongation factor G, domain IV 476 594 6.5E-44 T 17-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 SUPERFAMILY SSF54211 476 596 8.34E-40 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0529 30522cb1a0305c1e47341af66bbf50a4 695 Pfam PF00679 Elongation factor G C-terminus 597 683 6.0E-29 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like FORC55_2590 6574e0c5e5c2803cba2acf8ec9a36e6c 110 SUPERFAMILY SSF46785 26 90 5.71E-9 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2590 6574e0c5e5c2803cba2acf8ec9a36e6c 110 Pfam PF09339 IclR helix-turn-helix domain 44 85 8.6E-6 T 17-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 FORC55_2590 6574e0c5e5c2803cba2acf8ec9a36e6c 110 Gene3D G3DSA:1.10.10.10 28 99 8.1E-8 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 SUPERFAMILY SSF50677 205 408 4.5E-53 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 Pfam PF08264 Anticodon-binding domain of tRNA 691 853 2.1E-25 T 17-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 Gene3D G3DSA:1.10.730.20 646 941 2.6E-84 T 17-10-2018 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 Pfam PF06827 Zinc finger found in FPG and IleRS 910 937 1.2E-7 T 17-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 940 21.454 T 17-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 SUPERFAMILY SSF47323 658 940 5.05E-73 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 Gene3D G3DSA:3.90.740.10 195 413 8.7E-240 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 853 6.8E-292 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 Gene3D G3DSA:3.40.50.620 25 635 8.7E-240 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 4.8E-32 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 4.8E-32 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.8E-32 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 4.8E-32 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 4.8E-32 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 SUPERFAMILY SSF52374 4 653 2.01E-136 T 17-10-2018 FORC55_2054 bb01151dac5c3fce55060ed8a2792a41 949 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 6.2E-216 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 SUPERFAMILY SSF51735 137 303 6.9E-49 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 Gene3D G3DSA:3.40.50.720 3 353 4.4E-137 T 17-10-2018 FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 5.7E-84 T 17-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 SUPERFAMILY SSF52283 1 360 2.21E-67 T 17-10-2018 FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 SMART SM01002 149 297 3.2E-88 T 17-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 PIRSF PIRSF000183 1 371 5.9E-157 T 17-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 Gene3D G3DSA:3.40.50.720 130 305 4.4E-137 T 17-10-2018 FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 8.6E-157 T 17-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 SMART SM01003 4 137 8.9E-79 T 17-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal FORC55_0930 8d4d8a2da1abd1a091ee6497b720bda4 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.6E-46 T 17-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal FORC55_0207 89a62eaf6536ee6cb530b966e245e758 388 Gene3D G3DSA:3.40.640.10 3 248 1.3E-80 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_0207 89a62eaf6536ee6cb530b966e245e758 388 Gene3D G3DSA:3.90.1150.10 249 384 2.1E-50 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_0207 89a62eaf6536ee6cb530b966e245e758 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 5.1E-133 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 FORC55_0207 89a62eaf6536ee6cb530b966e245e758 388 PIRSF PIRSF001434 1 384 4.8E-128 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 FORC55_0207 89a62eaf6536ee6cb530b966e245e758 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 FORC55_0207 89a62eaf6536ee6cb530b966e245e758 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 3.0E-210 T 17-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 FORC55_0207 89a62eaf6536ee6cb530b966e245e758 388 SUPERFAMILY SSF53383 9 381 1.1E-112 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1801 5e18f94d3022383a31d9feeb1f134369 139 SUPERFAMILY SSF46955 1 126 9.89E-35 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily FORC55_1801 5e18f94d3022383a31d9feeb1f134369 139 Gene3D G3DSA:1.10.1660.10 1 125 5.3E-31 T 17-10-2018 FORC55_1801 5e18f94d3022383a31d9feeb1f134369 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 2.1E-63 T 17-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 FORC55_1801 5e18f94d3022383a31d9feeb1f134369 139 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_1801 5e18f94d3022383a31d9feeb1f134369 139 SMART SM00422 1 70 1.2E-25 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_1801 5e18f94d3022383a31d9feeb1f134369 139 Pfam PF13411 MerR HTH family regulatory protein 1 67 3.8E-17 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.828 T 17-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Gene3D G3DSA:3.40.1140.10 1 227 3.2E-97 T 17-10-2018 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 PIRSF PIRSF005246 1 1487 0.0 T 17-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 SUPERFAMILY SSF52540 21 1434 3.36E-5 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 SUPERFAMILY SSF52540 23 224 1.41E-22 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Gene3D G3DSA:1.20.58.850 621 831 1.3E-135 T 17-10-2018 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Pfam PF04310 MukB N-terminal 2 227 8.3E-123 T 17-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Gene3D G3DSA:1.20.58.850 583 852 1.3E-135 T 17-10-2018 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Gene3D G3DSA:1.20.1060.30 668 779 1.3E-135 T 17-10-2018 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 5.7E-15 T 17-10-2018 FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Pfam PF16330 MukB hinge domain 646 811 3.2E-73 T 17-10-2018 IPR032520 MukB, hinge domain FORC55_1048 a7790c2eb5f64ffec29d651156d39c49 1491 Gene3D G3DSA:3.40.1140.10 1383 1469 1.1E-38 T 17-10-2018 FORC55_2466 4616a365674276b711d97557c32a82da 357 Gene3D G3DSA:3.90.78.10 232 357 5.8E-51 T 17-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_2466 4616a365674276b711d97557c32a82da 357 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 357 87.364 T 17-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_2466 4616a365674276b711d97557c32a82da 357 Pfam PF01565 FAD binding domain 33 163 4.4E-22 T 17-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 FORC55_2466 4616a365674276b711d97557c32a82da 357 SUPERFAMILY SSF56176 18 208 1.36E-44 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 FORC55_2466 4616a365674276b711d97557c32a82da 357 SUPERFAMILY SSF56194 215 352 6.02E-50 T 17-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_2466 4616a365674276b711d97557c32a82da 357 Gene3D G3DSA:3.30.465.10 83 231 4.0E-57 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 FORC55_2466 4616a365674276b711d97557c32a82da 357 Gene3D G3DSA:3.30.43.10 1 82 2.5E-25 T 17-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 FORC55_2466 4616a365674276b711d97557c32a82da 357 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 342 3.8E-95 T 17-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_2466 4616a365674276b711d97557c32a82da 357 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 219 341 3.5E-34 T 17-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_2733 b7b0970e3f4c635e87e578be80f5a1be 526 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 1.2E-33 T 17-10-2018 IPR000160 GGDEF domain FORC55_2733 b7b0970e3f4c635e87e578be80f5a1be 526 Gene3D G3DSA:1.25.40.10 16 320 3.9E-15 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2733 b7b0970e3f4c635e87e578be80f5a1be 526 Gene3D G3DSA:3.30.70.270 356 526 5.4E-42 T 17-10-2018 FORC55_2733 b7b0970e3f4c635e87e578be80f5a1be 526 SMART SM00267 358 526 2.1E-32 T 17-10-2018 IPR000160 GGDEF domain FORC55_2733 b7b0970e3f4c635e87e578be80f5a1be 526 SUPERFAMILY SSF55073 374 525 4.32E-35 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2733 b7b0970e3f4c635e87e578be80f5a1be 526 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 525 1.4E-32 T 17-10-2018 IPR000160 GGDEF domain FORC55_2733 b7b0970e3f4c635e87e578be80f5a1be 526 SUPERFAMILY SSF48452 38 227 1.11E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0656 010caa95f428d7d7b7d0b9288c82d2a9 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 128 7.8E-29 T 17-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 FORC55_0656 010caa95f428d7d7b7d0b9288c82d2a9 131 PIRSF PIRSF002889 1 131 1.7E-33 T 17-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 FORC55_2300 c9f3336f6fb1943dcbd14441688a5c59 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 324 5.6E-74 T 17-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 FORC55_2300 c9f3336f6fb1943dcbd14441688a5c59 359 Gene3D G3DSA:3.40.190.10 154 325 6.2E-117 T 17-10-2018 FORC55_2300 c9f3336f6fb1943dcbd14441688a5c59 359 Gene3D G3DSA:3.40.190.170 37 346 6.2E-117 T 17-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily FORC55_2300 c9f3336f6fb1943dcbd14441688a5c59 359 PIRSF PIRSF039026 1 358 2.2E-131 T 17-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 Pfam PF13183 4Fe-4S dicluster domain 544 616 3.1E-10 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 Gene3D G3DSA:3.30.70.2740 398 481 1.7E-7 T 17-10-2018 FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 Gene3D G3DSA:3.30.70.3270 527 672 2.7E-7 T 17-10-2018 FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 Gene3D G3DSA:1.10.45.10 483 522 3.8E-5 T 17-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 Pfam PF02754 Cysteine-rich domain 714 801 0.0023 T 17-10-2018 IPR004017 Cysteine-rich domain FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 Pfam PF01565 FAD binding domain 47 183 1.0E-28 T 17-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 SUPERFAMILY SSF46548 499 627 2.96E-21 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 SUPERFAMILY SSF55103 275 525 7.85E-56 T 17-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 SUPERFAMILY SSF56176 11 268 2.21E-56 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 Pfam PF02913 FAD linked oxidases, C-terminal domain 272 520 3.0E-62 T 17-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 FORC55_3568 88877fb3b11b25bfd5ec416c0a5f2d1b 959 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_0915 1bbbbb892429b9096ada1c906e793258 93 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 18.839 T 17-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 FORC55_0915 1bbbbb892429b9096ada1c906e793258 93 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 83 8.4E-15 T 17-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 FORC55_0882 ce07ef90737595d36103ce44d2b7564b 364 SUPERFAMILY SSF48695 11 176 2.1E-46 T 17-10-2018 IPR036280 Multiheme cytochrome superfamily FORC55_0882 ce07ef90737595d36103ce44d2b7564b 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 2.7E-65 T 17-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal FORC55_0882 ce07ef90737595d36103ce44d2b7564b 364 PIRSF PIRSF000014 1 364 4.0E-160 T 17-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 FORC55_0882 ce07ef90737595d36103ce44d2b7564b 364 Gene3D G3DSA:1.10.3820.10 2 180 5.1E-35 T 17-10-2018 IPR038266 NapC/NirT cytochrome c superfamily FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 SMART SM00436 129 224 7.8E-32 T 17-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 SMART SM00437 284 563 7.3E-90 T 17-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 Gene3D G3DSA:2.70.20.10 218 493 1.4E-162 T 17-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 71.225 T 17-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 Pfam PF01751 Toprim domain 4 135 3.5E-16 T 17-10-2018 IPR006171 TOPRIM domain FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 Gene3D G3DSA:1.10.290.10 293 422 1.4E-162 T 17-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 SMART SM00493 2 125 5.7E-27 T 17-10-2018 IPR006171 TOPRIM domain FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.1E-26 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.1E-26 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.1E-26 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.1E-26 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.1E-26 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 Gene3D G3DSA:3.40.50.140 2 157 2.9E-61 T 17-10-2018 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 17-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 Gene3D G3DSA:1.10.460.10 163 607 1.4E-162 T 17-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 627 5.1E-238 T 17-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 Pfam PF01131 DNA topoisomerase 159 598 1.4E-114 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_0802 54f821aa8b3f216f7f5c11f7a5a31950 647 SUPERFAMILY SSF56712 3 611 8.24E-184 T 17-10-2018 IPR023405 DNA topoisomerase, type IA, core domain FORC55_0893 29a397fd356005d191b77a600e825449 223 SUPERFAMILY SSF69593 8 208 1.57E-27 T 17-10-2018 FORC55_0893 29a397fd356005d191b77a600e825449 223 Pfam PF01553 Acyltransferase 27 157 2.3E-19 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_0893 29a397fd356005d191b77a600e825449 223 SMART SM00563 38 160 5.8E-29 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 Pfam PF06029 AlkA N-terminal domain 198 309 6.0E-37 T 17-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 SUPERFAMILY SSF46689 141 190 5.82E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 SMART SM01009 197 309 3.5E-48 T 17-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 SUPERFAMILY SSF48150 299 450 8.72E-25 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 SMART SM00342 103 186 8.4E-24 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 140 182 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 Gene3D G3DSA:1.10.340.30 310 410 3.6E-16 T 17-10-2018 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 SUPERFAMILY SSF46689 92 136 3.99E-5 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 SUPERFAMILY SSF55945 198 291 4.39E-29 T 17-10-2018 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 Pfam PF02805 Metal binding domain of Ada 12 75 4.3E-29 T 17-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 Gene3D G3DSA:3.40.10.10 4 77 3.8E-29 T 17-10-2018 IPR035451 Ada-like domain superfamily FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 Gene3D G3DSA:1.10.10.60 89 197 5.1E-24 T 17-10-2018 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 SUPERFAMILY SSF57884 1 90 8.63E-34 T 17-10-2018 IPR035451 Ada-like domain superfamily FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 Pfam PF12833 Helix-turn-helix domain 109 187 2.3E-22 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3597 43fc9f7cf66cab1ddcc5af71e7c19a8d 452 Gene3D G3DSA:3.30.310.20 198 309 1.2E-28 T 17-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 Gene3D G3DSA:2.30.42.10 223 313 1.4E-18 T 17-10-2018 FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 SUPERFAMILY SSF50156 196 291 4.73E-16 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 Gene3D G3DSA:2.30.42.10 126 221 5.7E-32 T 17-10-2018 FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 Pfam PF02163 Peptidase family M50 10 440 2.1E-86 T 17-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 SMART SM00228 115 186 0.044 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 SMART SM00228 212 281 1.0E-5 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 SUPERFAMILY SSF50156 91 184 6.18E-13 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 227 268 7.9E-7 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_0608 3de86c5e1d786404374c7fd18a21aff9 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 3.5E-139 T 17-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.1E-96 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.1E-17 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.1E-17 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.1E-17 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.1E-17 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 PIRSF PIRSF000398 1 275 1.5E-76 T 17-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 Gene3D G3DSA:3.40.50.150 7 239 1.9E-83 T 17-10-2018 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 Gene3D G3DSA:1.10.1020.10 57 156 1.9E-83 T 17-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 SUPERFAMILY SSF53335 5 268 1.29E-74 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.7E-70 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 FORC55_0258 a1ca903f4e36631d531ac1a1d279ed53 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_2675 533e7a305045a3a15904ff5cc35bba18 665 Gene3D G3DSA:3.40.50.150 155 469 2.6E-83 T 17-10-2018 FORC55_2675 533e7a305045a3a15904ff5cc35bba18 665 SUPERFAMILY SSF53335 11 495 1.39E-109 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2675 533e7a305045a3a15904ff5cc35bba18 665 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 2.1E-9 T 17-10-2018 FORC55_2675 533e7a305045a3a15904ff5cc35bba18 665 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 193 2.1E-9 T 17-10-2018 FORC55_2675 533e7a305045a3a15904ff5cc35bba18 665 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 2.1E-9 T 17-10-2018 FORC55_2675 533e7a305045a3a15904ff5cc35bba18 665 Pfam PF12161 HsdM N-terminal domain 12 142 1.9E-17 T 17-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain FORC55_2675 533e7a305045a3a15904ff5cc35bba18 665 Gene3D G3DSA:1.20.1260.30 2 71 2.1E-5 T 17-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily FORC55_2675 533e7a305045a3a15904ff5cc35bba18 665 Pfam PF02384 N-6 DNA Methylase 155 455 2.2E-57 T 17-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 FORC55_0511 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Pfam PF01228 Glycine radical 15 106 1.5E-23 T 17-10-2018 IPR001150 Glycine radical domain GO:0003824 FORC55_0511 3b8510fb3067bbe1d2b75a59f03b8bc6 125 SUPERFAMILY SSF51998 64 124 2.43E-23 T 17-10-2018 FORC55_0511 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.679 T 17-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA FORC55_0511 3b8510fb3067bbe1d2b75a59f03b8bc6 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 6.4E-68 T 17-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA FORC55_0511 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Gene3D G3DSA:3.20.70.20 15 125 4.6E-25 T 17-10-2018 FORC55_0511 3b8510fb3067bbe1d2b75a59f03b8bc6 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 17-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site FORC55_0511 3b8510fb3067bbe1d2b75a59f03b8bc6 125 PIRSF PIRSF000378 2 125 1.2E-53 T 17-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SUPERFAMILY SSF51206 8 137 6.42E-35 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SUPERFAMILY SSF46785 139 207 2.69E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SMART SM00100 2 122 1.5E-26 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 17-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Gene3D G3DSA:1.10.10.10 139 207 1.6E-35 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 17-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 17-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Gene3D G3DSA:2.60.120.10 10 138 2.3E-43 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 2.7E-23 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_0270 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SMART SM00419 160 208 4.2E-17 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.2E-251 T 17-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.4E-38 T 17-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 SUPERFAMILY SSF51971 145 399 2.41E-69 T 17-10-2018 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 Gene3D G3DSA:3.50.50.60 247 398 7.6E-44 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 2.1E-23 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 Gene3D G3DSA:1.10.1060.10 12 146 1.7E-35 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.4E-36 T 17-10-2018 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.4E-36 T 17-10-2018 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.4E-36 T 17-10-2018 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.4E-36 T 17-10-2018 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.4E-36 T 17-10-2018 FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 Gene3D G3DSA:3.50.50.60 147 236 1.3E-9 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0497 4b98e56ffbdcfca3a06fe618858cc381 470 SUPERFAMILY SSF46548 6 157 8.89E-42 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_0872 2ae6bfccea2680505d2f3b123cd5a981 291 Gene3D G3DSA:3.10.450.240 168 291 1.8E-5 T 17-10-2018 FORC55_0872 2ae6bfccea2680505d2f3b123cd5a981 291 Pfam PF07466 Protein of unknown function (DUF1517) 28 128 1.4E-5 T 17-10-2018 IPR010903 Protein of unknown function DUF1517 FORC55_0872 2ae6bfccea2680505d2f3b123cd5a981 291 Pfam PF04280 Tim44-like domain 170 290 3.2E-13 T 17-10-2018 IPR007379 Tim44-like domain FORC55_0872 2ae6bfccea2680505d2f3b123cd5a981 291 SMART SM00978 160 291 8.2E-32 T 17-10-2018 IPR007379 Tim44-like domain FORC55_0872 2ae6bfccea2680505d2f3b123cd5a981 291 SUPERFAMILY SSF54427 172 290 5.26E-15 T 17-10-2018 IPR032710 NTF2-like domain superfamily FORC55_3360 855a3646f98622473733616583664014 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 226 1.5E-22 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3360 855a3646f98622473733616583664014 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 222 1.9E-73 T 17-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 FORC55_3360 855a3646f98622473733616583664014 231 Gene3D G3DSA:1.10.3720.10 3 226 9.2E-60 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3360 855a3646f98622473733616583664014 231 SUPERFAMILY SSF161098 6 219 3.01E-50 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2015 244988e7376d58d7e8da3bdbe5cd1fca 548 Gene3D G3DSA:1.10.3720.10 277 541 2.5E-30 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2015 244988e7376d58d7e8da3bdbe5cd1fca 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 535 1.8E-15 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2015 244988e7376d58d7e8da3bdbe5cd1fca 548 SUPERFAMILY SSF161098 259 529 1.83E-34 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2015 244988e7376d58d7e8da3bdbe5cd1fca 548 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 279 539 8.5E-76 T 17-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 366 401 1.9E-7 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 129 143 0.014 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 77 101 9.3E-5 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 43 56 0.12 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 227 262 1.6E-8 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 517 540 0.059 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Pfam PF03572 Peptidase family S41 900 1054 3.3E-20 T 17-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Pfam PF14684 Tricorn protease C1 domain 708 773 1.4E-25 T 17-10-2018 IPR028204 Tricorn protease C1 domain FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 SUPERFAMILY SSF52096 705 1081 5.8E-61 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 SMART SM00245 861 1056 2.2E-4 T 17-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 PIRSF PIRSF036421 29 1084 7.5E-199 T 17-10-2018 IPR012393 Tricorn protease GO:0008236 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Gene3D G3DSA:2.30.42.10 783 877 2.3E-7 T 17-10-2018 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 SUPERFAMILY SSF69304 339 547 5.36E-22 T 17-10-2018 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Gene3D G3DSA:3.90.226.10 878 1084 5.6E-50 T 17-10-2018 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Gene3D G3DSA:2.120.10.60 30 317 1.5E-59 T 17-10-2018 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Gene3D G3DSA:2.120.10.60 327 406 1.8E-7 T 17-10-2018 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 SUPERFAMILY SSF50156 790 868 3.06E-11 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Gene3D G3DSA:3.30.750.44 705 776 5.8E-15 T 17-10-2018 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 SUPERFAMILY SSF69304 42 310 7.85E-42 T 17-10-2018 FORC55_2732 a3d411bc6b33ec6019f32634b1618345 1084 Gene3D G3DSA:2.120.10.30 407 574 1.5E-12 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like FORC55_1330 1b5baf5465f2487adc0fd8a0a55f55bc 1613 SUPERFAMILY SSF51735 945 1282 1.51E-28 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1330 1b5baf5465f2487adc0fd8a0a55f55bc 1613 PIRSF PIRSF036761 1 1610 0.0 T 17-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 FORC55_1330 1b5baf5465f2487adc0fd8a0a55f55bc 1613 SUPERFAMILY SSF53223 754 940 1.15E-25 T 17-10-2018 FORC55_1330 1b5baf5465f2487adc0fd8a0a55f55bc 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 17-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 SMART SM00487 28 234 3.7E-55 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 SMART SM00490 270 351 1.9E-32 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 SUPERFAMILY SSF52540 85 363 9.0E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 Gene3D G3DSA:3.40.50.300 229 393 1.7E-46 T 17-10-2018 FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 Gene3D G3DSA:3.40.50.300 2 222 8.0E-72 T 17-10-2018 FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.429 T 17-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 Pfam PF00271 Helicase conserved C-terminal domain 245 351 1.0E-30 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2475 80fd39a509c68d41d5d10c03cfe8d8a7 438 Pfam PF00270 DEAD/DEAH box helicase 33 207 6.9E-46 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_3679 13af459ed37db38889a1218e71bd36e7 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.9E-20 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_3679 13af459ed37db38889a1218e71bd36e7 218 SMART SM00862 145 216 8.5E-22 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_3679 13af459ed37db38889a1218e71bd36e7 218 Pfam PF00072 Response regulator receiver domain 4 112 8.3E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3679 13af459ed37db38889a1218e71bd36e7 218 SUPERFAMILY SSF52172 1 130 1.99E-35 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3679 13af459ed37db38889a1218e71bd36e7 218 SMART SM00448 1 112 1.9E-35 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3679 13af459ed37db38889a1218e71bd36e7 218 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-35 T 17-10-2018 FORC55_3679 13af459ed37db38889a1218e71bd36e7 218 Gene3D G3DSA:1.10.10.10 123 218 6.5E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3679 13af459ed37db38889a1218e71bd36e7 218 SUPERFAMILY SSF46894 118 216 1.96E-24 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_0486 ac70ba677240f6b045e6e3593943075e 306 Pfam PF03783 Curli production assembly/transport component CsgG 36 218 2.9E-35 T 17-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 9 332 5.7E-126 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 17-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 SUPERFAMILY SSF51905 1 322 3.89E-59 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.6E-41 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.6E-41 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.6E-41 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 2.6E-41 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.6E-41 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 7.1E-66 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 150 271 5.7E-126 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 8.5E-151 T 17-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.30.390.30 346 467 1.3E-44 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PIRSF PIRSF000350 1 469 6.1E-83 T 17-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.2E-68 T 17-10-2018 FORC55_0463 7b47a9c75e9481af3b101d71c84ffe29 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 SUPERFAMILY SSF53850 92 306 2.71E-43 T 17-10-2018 FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 Pfam PF03466 LysR substrate binding domain 97 307 3.8E-27 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 6.1E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 SUPERFAMILY SSF46785 7 87 5.83E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 Gene3D G3DSA:3.40.190.10 94 304 1.0E-54 T 17-10-2018 FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 Gene3D G3DSA:3.40.190.10 182 280 1.0E-54 T 17-10-2018 FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 Gene3D G3DSA:1.10.10.10 2 89 1.7E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.0E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.0E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0053 bb63ba0e1db2f0379439b3cb5e2d5829 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.0E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2281 f35282693cfbb515be9f0ad90133d68a 208 Gene3D G3DSA:3.40.50.150 1 206 1.3E-76 T 17-10-2018 FORC55_2281 f35282693cfbb515be9f0ad90133d68a 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.365 T 17-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 FORC55_2281 f35282693cfbb515be9f0ad90133d68a 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 4.1E-80 T 17-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 FORC55_2281 f35282693cfbb515be9f0ad90133d68a 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 17-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 FORC55_2281 f35282693cfbb515be9f0ad90133d68a 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 1.3E-70 T 17-10-2018 FORC55_2281 f35282693cfbb515be9f0ad90133d68a 208 SUPERFAMILY SSF53335 14 204 1.67E-45 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2231 a9b7a323c01b6125a0de718b09318412 548 SUPERFAMILY SSF52091 439 541 2.35E-11 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_2231 a9b7a323c01b6125a0de718b09318412 548 Gene3D G3DSA:3.30.750.24 427 548 1.3E-15 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_2231 a9b7a323c01b6125a0de718b09318412 548 Pfam PF00916 Sulfate permease family 11 376 2.1E-83 T 17-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 FORC55_2231 a9b7a323c01b6125a0de718b09318412 548 Pfam PF01740 STAS domain 440 533 2.0E-11 T 17-10-2018 IPR002645 STAS domain FORC55_3168 8c763dc793c51063e154be3edaf62e60 329 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 180 1.3E-43 T 17-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain FORC55_3168 8c763dc793c51063e154be3edaf62e60 329 Gene3D G3DSA:3.40.50.300 2 196 2.1E-45 T 17-10-2018 FORC55_3168 8c763dc793c51063e154be3edaf62e60 329 SUPERFAMILY SSF52540 4 166 7.24E-25 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3131 fba4c983a07fbc920d5ac7f73a0a73c4 59 Pfam PF04875 Protein of unknown function, DUF645 1 59 1.1E-36 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_2905 59ca1700d699a0a70f36ff6f882a6177 254 SUPERFAMILY SSF52540 2 226 3.59E-57 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2905 59ca1700d699a0a70f36ff6f882a6177 254 Pfam PF00005 ABC transporter 18 164 1.2E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2905 59ca1700d699a0a70f36ff6f882a6177 254 Gene3D G3DSA:3.40.50.300 1 251 6.9E-64 T 17-10-2018 FORC55_2905 59ca1700d699a0a70f36ff6f882a6177 254 SMART SM00382 26 213 4.5E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2905 59ca1700d699a0a70f36ff6f882a6177 254 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0017 5500aa59c9da57370ffcfacc48c8b4e7 312 Gene3D G3DSA:3.20.10.10 138 289 1.2E-104 T 17-10-2018 FORC55_0017 5500aa59c9da57370ffcfacc48c8b4e7 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 4.2E-145 T 17-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 FORC55_0017 5500aa59c9da57370ffcfacc48c8b4e7 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 17-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 FORC55_0017 5500aa59c9da57370ffcfacc48c8b4e7 312 SUPERFAMILY SSF56752 7 307 1.16E-103 T 17-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 FORC55_0017 5500aa59c9da57370ffcfacc48c8b4e7 312 Gene3D G3DSA:3.30.470.10 10 127 1.2E-104 T 17-10-2018 FORC55_0017 5500aa59c9da57370ffcfacc48c8b4e7 312 Pfam PF01063 Amino-transferase class IV 36 268 7.0E-47 T 17-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 FORC55_2521 5617de7f6e9355f13f1ab30ae8f353c2 316 SUPERFAMILY SSF51735 1 312 8.92E-63 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2521 5617de7f6e9355f13f1ab30ae8f353c2 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 1.8E-29 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 FORC55_2521 5617de7f6e9355f13f1ab30ae8f353c2 316 Gene3D G3DSA:3.40.50.720 1 310 1.8E-59 T 17-10-2018 FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 Gene3D G3DSA:1.10.10.10 1 90 2.3E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 SUPERFAMILY SSF46785 4 112 8.94E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 Gene3D G3DSA:3.40.190.290 91 293 6.3E-58 T 17-10-2018 FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 Pfam PF03466 LysR substrate binding domain 88 293 3.8E-43 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 SUPERFAMILY SSF53850 89 293 3.44E-43 T 17-10-2018 FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.9E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.9E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.9E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3280 cb70edd51f79d7b1584acaf3cfaf33d3 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.2E-20 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3274 6f01242978de9af8c7b78fc6ee98ca87 346 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 183 335 2.7E-28 T 17-10-2018 IPR017516 AbrB duplication FORC55_3274 6f01242978de9af8c7b78fc6ee98ca87 346 PIRSF PIRSF038991 2 166 2.1E-15 T 17-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 FORC55_3274 6f01242978de9af8c7b78fc6ee98ca87 346 PIRSF PIRSF038991 83 346 9.9E-30 T 17-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 FORC55_3274 6f01242978de9af8c7b78fc6ee98ca87 346 Pfam PF05145 Transition state regulatory protein AbrB 84 338 3.2E-46 T 17-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 Gene3D G3DSA:3.30.1360.120 1 120 6.5E-40 T 17-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 SUPERFAMILY SSF52540 70 371 1.19E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.203 T 17-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 SUPERFAMILY SSF116878 120 453 2.62E-53 T 17-10-2018 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 Pfam PF01926 50S ribosome-binding GTPase 217 308 2.4E-24 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 6.8E-23 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 Gene3D G3DSA:3.40.50.300 216 381 1.8E-104 T 17-10-2018 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 1.5E-102 T 17-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.2E-35 T 17-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 Pfam PF12631 MnmE helical domain 122 450 9.1E-63 T 17-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 FORC55_2683 2944fd1621a6072b4aed3a08b88884d6 453 Gene3D G3DSA:1.20.120.430 121 453 1.8E-104 T 17-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 SUPERFAMILY SSF51905 5 385 3.37E-62 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 Gene3D G3DSA:3.30.9.50 80 270 7.1E-123 T 17-10-2018 FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 6.6E-138 T 17-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 17-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 Gene3D G3DSA:3.50.50.60 6 339 7.1E-123 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 Pfam PF01494 FAD binding domain 5 348 4.4E-29 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 9.5E-20 T 17-10-2018 FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 9.5E-20 T 17-10-2018 FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 9.5E-20 T 17-10-2018 FORC55_0402 adeee9b51e7a196777b5acca2d9be919 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.5E-20 T 17-10-2018 FORC55_2998 d0429c7130e27818873254ae0547a7db 53 Pfam PF04875 Protein of unknown function, DUF645 1 53 9.5E-35 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_3001 d0429c7130e27818873254ae0547a7db 53 Pfam PF04875 Protein of unknown function, DUF645 1 53 9.5E-35 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_3095 d0429c7130e27818873254ae0547a7db 53 Pfam PF04875 Protein of unknown function, DUF645 1 53 9.5E-35 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_3049 d0429c7130e27818873254ae0547a7db 53 Pfam PF04875 Protein of unknown function, DUF645 1 53 9.5E-35 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_3039 d0429c7130e27818873254ae0547a7db 53 Pfam PF04875 Protein of unknown function, DUF645 1 53 9.5E-35 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_1987 626995cb91765d4f622203d4718db88e 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.175 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 17-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1987 626995cb91765d4f622203d4718db88e 142 SMART SM00562 3 140 6.3E-93 T 17-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 SUPERFAMILY SSF54919 1 140 6.42E-62 T 17-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 Gene3D G3DSA:3.30.70.141 1 141 3.6E-59 T 17-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.4E-38 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.4E-38 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.4E-38 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.4E-38 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.4E-38 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_1987 626995cb91765d4f622203d4718db88e 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.7E-58 T 17-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 FORC55_0300 bef206baad4ac70a20f61a523a57ab30 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 17-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0300 bef206baad4ac70a20f61a523a57ab30 179 Gene3D G3DSA:3.30.1440.10 1 179 2.8E-80 T 17-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0300 bef206baad4ac70a20f61a523a57ab30 179 PIRSF PIRSF002161 1 179 3.4E-66 T 17-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0300 bef206baad4ac70a20f61a523a57ab30 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.152 T 17-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0300 bef206baad4ac70a20f61a523a57ab30 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.7E-41 T 17-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0300 bef206baad4ac70a20f61a523a57ab30 179 SUPERFAMILY SSF55282 4 179 8.95E-79 T 17-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0300 bef206baad4ac70a20f61a523a57ab30 179 Pfam PF00281 Ribosomal protein L5 24 80 1.2E-28 T 17-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_3216 233327f2d64e0ed4ca8117e5c7aa3f06 160 Pfam PF13275 S4 domain 22 83 1.9E-22 T 17-10-2018 FORC55_3216 233327f2d64e0ed4ca8117e5c7aa3f06 160 Gene3D G3DSA:3.10.290.10 12 85 3.5E-21 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_3216 233327f2d64e0ed4ca8117e5c7aa3f06 160 SUPERFAMILY SSF55174 9 83 4.84E-19 T 17-10-2018 FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 PIRSF PIRSF000077 38 142 5.7E-32 T 17-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 8.5E-35 T 17-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 Gene3D G3DSA:3.40.30.10 41 144 8.7E-33 T 17-10-2018 FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 Gene3D G3DSA:2.20.28.140 1 37 6.8E-16 T 17-10-2018 FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 SUPERFAMILY SSF52833 29 142 2.23E-37 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 Pfam PF00085 Thioredoxin 43 140 4.7E-28 T 17-10-2018 IPR013766 Thioredoxin domain GO:0045454 FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 PRINTS PR00421 Thioredoxin family signature 58 66 1.6E-7 T 17-10-2018 FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 PRINTS PR00421 Thioredoxin family signature 106 117 1.6E-7 T 17-10-2018 FORC55_3383 8718774e9b87fa96652aeeb332788bab 144 PRINTS PR00421 Thioredoxin family signature 66 75 1.6E-7 T 17-10-2018 FORC55_1247 0f7cf1dbad77c183f39c97c3afc73b34 261 Gene3D G3DSA:3.30.1330.80 31 247 7.0E-79 T 17-10-2018 FORC55_1247 0f7cf1dbad77c183f39c97c3afc73b34 261 PIRSF PIRSF001332 13 261 6.9E-97 T 17-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 FORC55_1247 0f7cf1dbad77c183f39c97c3afc73b34 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 30 260 3.2E-105 T 17-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 FORC55_1247 0f7cf1dbad77c183f39c97c3afc73b34 261 Gene3D G3DSA:3.30.1330.80 106 228 7.0E-79 T 17-10-2018 FORC55_1247 0f7cf1dbad77c183f39c97c3afc73b34 261 SUPERFAMILY SSF117856 30 260 9.94E-84 T 17-10-2018 FORC55_1247 0f7cf1dbad77c183f39c97c3afc73b34 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 248 1.9E-82 T 17-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 5.2E-192 T 17-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 SUPERFAMILY SSF52540 183 380 1.13E-38 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 SUPERFAMILY SSF52540 461 634 2.23E-27 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 SMART SM00490 493 590 4.1E-11 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 Pfam PF00271 Helicase conserved C-terminal domain 515 589 1.4E-7 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 SMART SM00487 195 396 3.3E-18 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 Gene3D G3DSA:1.10.8.630 4 114 5.4E-35 T 17-10-2018 FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 24.924 T 17-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 Gene3D G3DSA:3.40.50.300 187 380 4.3E-77 T 17-10-2018 FORC55_0211 ee58f60963f53ec2166403f17a49e0a4 734 Pfam PF00270 DEAD/DEAH box helicase 205 364 2.5E-14 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_3453 3f64de073199e88603a7d72662944c35 190 SMART SM01266 4 56 2.0E-10 T 17-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 FORC55_3453 3f64de073199e88603a7d72662944c35 190 Gene3D G3DSA:2.160.10.10 1 190 3.9E-69 T 17-10-2018 FORC55_3453 3f64de073199e88603a7d72662944c35 190 Pfam PF12464 Maltose acetyltransferase 6 55 6.8E-8 T 17-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 FORC55_3453 3f64de073199e88603a7d72662944c35 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 161 2.6E-8 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_3453 3f64de073199e88603a7d72662944c35 190 SUPERFAMILY SSF51161 3 183 8.46E-45 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_3453 3f64de073199e88603a7d72662944c35 190 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 FORC55_2742 8c748063c872591483c1ed33e57eeff5 448 SMART SM00487 20 223 8.8E-51 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2742 8c748063c872591483c1ed33e57eeff5 448 Pfam PF00271 Helicase conserved C-terminal domain 237 341 5.9E-29 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2742 8c748063c872591483c1ed33e57eeff5 448 SMART SM00490 260 341 3.7E-31 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2742 8c748063c872591483c1ed33e57eeff5 448 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_2742 8c748063c872591483c1ed33e57eeff5 448 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.9E-47 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_2742 8c748063c872591483c1ed33e57eeff5 448 Gene3D G3DSA:3.40.50.300 214 423 9.2E-51 T 17-10-2018 FORC55_2742 8c748063c872591483c1ed33e57eeff5 448 SUPERFAMILY SSF52540 73 359 2.49E-70 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2742 8c748063c872591483c1ed33e57eeff5 448 Gene3D G3DSA:3.40.50.300 1 212 4.9E-73 T 17-10-2018 FORC55_1556 9d0bc6e2763081f7a3c6ec7c21bcd22f 474 Pfam PF08411 Exonuclease C-terminal 210 470 1.5E-104 T 17-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 FORC55_1556 9d0bc6e2763081f7a3c6ec7c21bcd22f 474 PIRSF PIRSF000977 1 474 3.7E-199 T 17-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 FORC55_1556 9d0bc6e2763081f7a3c6ec7c21bcd22f 474 Gene3D G3DSA:1.20.1280.70 358 419 1.6E-25 T 17-10-2018 FORC55_1556 9d0bc6e2763081f7a3c6ec7c21bcd22f 474 SUPERFAMILY SSF53098 7 472 1.24E-134 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1556 9d0bc6e2763081f7a3c6ec7c21bcd22f 474 Gene3D G3DSA:2.30.30.450 212 352 1.2E-55 T 17-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily FORC55_1556 9d0bc6e2763081f7a3c6ec7c21bcd22f 474 Gene3D G3DSA:3.30.420.10 1 199 1.4E-71 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_1556 9d0bc6e2763081f7a3c6ec7c21bcd22f 474 Pfam PF00929 Exonuclease 11 191 4.1E-23 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.3E-47 T 17-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.3E-47 T 17-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.3E-47 T 17-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.3E-47 T 17-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.3E-47 T 17-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.3E-47 T 17-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.3E-47 T 17-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 SUPERFAMILY SSF56327 173 436 1.97E-90 T 17-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 Gene3D G3DSA:3.40.50.720 2 170 5.2E-66 T 17-10-2018 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 SUPERFAMILY SSF51735 6 170 9.11E-54 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 Gene3D G3DSA:3.90.110.10 171 439 1.1E-98 T 17-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 3.0E-49 T 17-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 FORC55_1507 af78ba6df166a7380efcadf07bd29ec6 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 3.6E-61 T 17-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 FORC55_1055 ad190ef93cacb192d97c6dcbfbfd40f5 412 Pfam PF00589 Phage integrase family 186 378 1.9E-20 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 FORC55_1055 ad190ef93cacb192d97c6dcbfbfd40f5 412 Gene3D G3DSA:1.10.150.130 74 178 9.8E-12 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal FORC55_1055 ad190ef93cacb192d97c6dcbfbfd40f5 412 Pfam PF12167 Arm DNA-binding domain 5 68 1.8E-22 T 17-10-2018 IPR022000 Min27-like integrase, DNA-binding domain FORC55_1055 ad190ef93cacb192d97c6dcbfbfd40f5 412 SUPERFAMILY SSF56349 79 384 1.62E-52 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 FORC55_1055 ad190ef93cacb192d97c6dcbfbfd40f5 412 Gene3D G3DSA:1.10.443.10 179 395 2.2E-37 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 FORC55_2163 9ad24c8c485e5e807adf10cc384b66ac 106 Pfam PF01381 Helix-turn-helix 12 63 4.5E-14 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2163 9ad24c8c485e5e807adf10cc384b66ac 106 SMART SM00530 11 66 4.5E-12 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2163 9ad24c8c485e5e807adf10cc384b66ac 106 Gene3D G3DSA:1.10.260.40 2 73 2.8E-16 T 17-10-2018 FORC55_2163 9ad24c8c485e5e807adf10cc384b66ac 106 SUPERFAMILY SSF47413 4 63 3.38E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2385 3914c8cd38fcc5f37dddafa52b8f14b3 371 Gene3D G3DSA:1.25.40.10 165 277 7.4E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2385 3914c8cd38fcc5f37dddafa52b8f14b3 371 SMART SM00028 180 213 26.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2385 3914c8cd38fcc5f37dddafa52b8f14b3 371 SMART SM00028 280 313 10.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2385 3914c8cd38fcc5f37dddafa52b8f14b3 371 SMART SM00028 214 247 170.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2385 3914c8cd38fcc5f37dddafa52b8f14b3 371 Gene3D G3DSA:1.25.40.10 278 371 7.1E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2385 3914c8cd38fcc5f37dddafa52b8f14b3 371 SUPERFAMILY SSF48452 180 342 1.56E-13 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0851 a05b122979731dcb28625d150ab7bc65 670 Gene3D G3DSA:3.40.50.300 469 660 8.2E-37 T 17-10-2018 FORC55_0851 a05b122979731dcb28625d150ab7bc65 670 Gene3D G3DSA:3.40.50.300 43 311 1.1E-49 T 17-10-2018 FORC55_0851 a05b122979731dcb28625d150ab7bc65 670 SUPERFAMILY SSF52540 39 626 3.38E-24 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0851 a05b122979731dcb28625d150ab7bc65 670 Pfam PF13307 Helicase C-terminal domain 486 643 3.3E-34 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 FORC55_0851 a05b122979731dcb28625d150ab7bc65 670 SMART SM00487 41 326 0.0029 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_0851 a05b122979731dcb28625d150ab7bc65 670 SMART SM00491 501 630 1.1E-45 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 FORC55_0851 a05b122979731dcb28625d150ab7bc65 670 SUPERFAMILY SSF52540 213 622 7.06E-9 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0037 f2c8dd5a29c50f6b373554430cf40aeb 188 SUPERFAMILY SSF57783 109 146 2.38E-5 T 17-10-2018 FORC55_0037 f2c8dd5a29c50f6b373554430cf40aeb 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 22 57 9.5E-15 T 17-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 FORC55_0037 f2c8dd5a29c50f6b373554430cf40aeb 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 113 151 1.2E-14 T 17-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 FORC55_0037 f2c8dd5a29c50f6b373554430cf40aeb 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 102 4.9E-16 T 17-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 FORC55_0037 f2c8dd5a29c50f6b373554430cf40aeb 188 SUPERFAMILY SSF57783 16 64 1.87E-14 T 17-10-2018 FORC55_0037 f2c8dd5a29c50f6b373554430cf40aeb 188 SUPERFAMILY SSF57783 66 101 4.59E-13 T 17-10-2018 FORC55_0037 f2c8dd5a29c50f6b373554430cf40aeb 188 Gene3D G3DSA:3.30.65.10 11 61 7.4E-8 T 17-10-2018 FORC55_0037 f2c8dd5a29c50f6b373554430cf40aeb 188 Gene3D G3DSA:3.30.65.10 62 108 1.2E-8 T 17-10-2018 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 2.7E-49 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 2.7E-49 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 2.7E-49 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 2.7E-49 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 2.7E-49 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 2.7E-49 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 2.7E-49 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 Gene3D G3DSA:2.40.30.170 354 441 2.1E-15 T 17-10-2018 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 17-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 Gene3D G3DSA:2.40.50.100 317 353 2.1E-15 T 17-10-2018 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 SUPERFAMILY SSF111369 63 124 1.44E-5 T 17-10-2018 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 Gene3D G3DSA:1.10.287.470 192 316 2.1E-15 T 17-10-2018 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 Pfam PF13533 Biotin-lipoyl like 75 108 2.6E-5 T 17-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 Gene3D G3DSA:1.10.287.470 105 126 1.7E-7 T 17-10-2018 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 7.4E-136 T 17-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 SUPERFAMILY SSF56954 108 261 1.03E-6 T 17-10-2018 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 Gene3D G3DSA:2.40.50.100 69 104 1.7E-7 T 17-10-2018 FORC55_3656 aed968a9f565e4b07b32d9463955c035 463 Pfam PF13437 HlyD family secretion protein 316 430 3.6E-17 T 17-10-2018 FORC55_3349 e2263b9b7fc38334eb3ec4967d2cb578 151 PIRSF PIRSF006614 8 151 7.4E-65 T 17-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 FORC55_3349 e2263b9b7fc38334eb3ec4967d2cb578 151 SUPERFAMILY SSF52335 2 150 3.43E-57 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily FORC55_3349 e2263b9b7fc38334eb3ec4967d2cb578 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 5.3E-65 T 17-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 FORC55_3349 e2263b9b7fc38334eb3ec4967d2cb578 151 Pfam PF02142 MGS-like domain 26 118 4.7E-18 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain FORC55_3349 e2263b9b7fc38334eb3ec4967d2cb578 151 Gene3D G3DSA:3.40.50.1380 1 151 1.0E-66 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily FORC55_3349 e2263b9b7fc38334eb3ec4967d2cb578 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.81 T 17-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 FORC55_3349 e2263b9b7fc38334eb3ec4967d2cb578 151 SMART SM00851 25 118 2.2E-22 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain FORC55_3349 e2263b9b7fc38334eb3ec4967d2cb578 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 17-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 FORC55_2749 b3ca33ef42c86f391ad1c3e67d2b196b 306 Gene3D G3DSA:1.10.3720.10 79 305 2.5E-32 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2749 b3ca33ef42c86f391ad1c3e67d2b196b 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 301 5.8E-23 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2749 b3ca33ef42c86f391ad1c3e67d2b196b 306 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 29 303 2.1E-92 T 17-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 FORC55_2749 b3ca33ef42c86f391ad1c3e67d2b196b 306 SUPERFAMILY SSF161098 31 300 4.06E-35 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1589 2bf11e3c77273ba79a1996b5d6d06585 227 Gene3D G3DSA:3.40.1550.10 7 173 2.3E-19 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_1589 2bf11e3c77273ba79a1996b5d6d06585 227 Pfam PF11813 Protein of unknown function (DUF3334) 3 227 6.8E-115 T 17-10-2018 IPR024513 Protein of unknown function DUF3334 FORC55_1589 2bf11e3c77273ba79a1996b5d6d06585 227 SUPERFAMILY SSF103039 10 173 2.88E-24 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 PIRSF PIRSF037314 1 450 1.5E-189 T 17-10-2018 IPR017171 Signal transduction histidine kinase, MctS FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 SMART SM01049 42 133 9.4E-34 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 Gene3D G3DSA:3.30.565.10 313 447 1.1E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 Gene3D G3DSA:3.30.450.20 29 203 9.6E-49 T 17-10-2018 FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 5.4E-9 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 Pfam PF17200 Single Cache domain 2 45 192 8.3E-44 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 SUPERFAMILY SSF55874 322 443 9.82E-20 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 SMART SM00387 353 447 2.5E-7 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1516 4f358f062e32d77980fdd78914f96a23 451 Pfam PF07730 Histidine kinase 250 315 6.7E-14 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 484 1.4E-156 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 PIRSF PIRSF000774 1 487 2.0E-153 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 PRINTS PR00045 Sigma-54 factor signature 198 215 4.3E-30 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 PRINTS PR00045 Sigma-54 factor signature 386 398 4.3E-30 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 PRINTS PR00045 Sigma-54 factor signature 402 413 4.3E-30 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 PRINTS PR00045 Sigma-54 factor signature 460 478 4.3E-30 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 Pfam PF04963 Sigma-54 factor, core binding domain 126 315 1.4E-59 T 17-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 3.8E-17 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 Pfam PF04552 Sigma-54, DNA binding domain 327 485 1.5E-73 T 17-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 Gene3D G3DSA:1.10.10.60 427 484 8.6E-24 T 17-10-2018 FORC55_0352 354c4f7b448943722a48634e8c9f0342 487 Gene3D G3DSA:1.10.10.1330 128 246 5.3E-23 T 17-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 SUPERFAMILY SSF90123 12 331 1.44E-54 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 Gene3D G3DSA:1.20.1560.10 2 334 3.0E-50 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 SUPERFAMILY SSF52540 358 580 5.43E-62 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 Pfam PF00005 ABC transporter 369 512 1.3E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 2.2E-178 T 17-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 Pfam PF00664 ABC transporter transmembrane region 25 292 3.7E-39 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 SMART SM00382 375 558 3.2E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1604 0e401a9ba844ed269a1490aff08ace87 595 Gene3D G3DSA:3.40.50.300 343 593 9.4E-66 T 17-10-2018 FORC55_3292 5b8fc3a0878a427ce9d8efc3c8b6f0e9 534 Gene3D G3DSA:3.40.630.30 281 407 3.3E-5 T 17-10-2018 FORC55_3292 5b8fc3a0878a427ce9d8efc3c8b6f0e9 534 Pfam PF13444 Acetyltransferase (GNAT) domain 281 382 1.8E-20 T 17-10-2018 FORC55_3292 5b8fc3a0878a427ce9d8efc3c8b6f0e9 534 SUPERFAMILY SSF69593 17 206 3.66E-12 T 17-10-2018 FORC55_3292 5b8fc3a0878a427ce9d8efc3c8b6f0e9 534 Pfam PF01553 Acyltransferase 20 148 8.5E-6 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_3292 5b8fc3a0878a427ce9d8efc3c8b6f0e9 534 SMART SM00563 28 151 8.0E-16 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_3292 5b8fc3a0878a427ce9d8efc3c8b6f0e9 534 SUPERFAMILY SSF55729 264 410 2.91E-19 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 PRINTS PR00064 Ribosomal protein L35 signature 27 44 3.8E-18 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 PRINTS PR00064 Ribosomal protein L35 signature 44 58 3.8E-18 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 PRINTS PR00064 Ribosomal protein L35 signature 59 77 3.8E-18 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 Pfam PF01632 Ribosomal protein L35 26 85 1.2E-19 T 17-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 25 87 17.6 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 SUPERFAMILY SSF143034 26 87 3.53E-19 T 17-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 ProSitePatterns PS00936 Ribosomal protein L35 signature. 29 54 - T 17-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 Gene3D G3DSA:2.40.50.530 25 88 7.0E-17 T 17-10-2018 FORC55_2991 d8690a9b3fbd4ff07421cbef3f303af3 88 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 26 87 2.0E-25 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 17-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 Gene3D G3DSA:3.30.750.70 70 135 9.7E-7 T 17-10-2018 FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 Gene3D G3DSA:1.10.10.10 1 69 1.9E-8 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 SMART SM01134 72 234 1.1E-68 T 17-10-2018 FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 SMART SM00420 6 58 1.7E-27 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.2E-13 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.2E-13 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 SUPERFAMILY SSF46785 5 70 1.24E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.4E-24 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 SUPERFAMILY SSF100950 74 234 4.28E-28 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_3528 03b1b44ce46ff756b232b99cb3b915f8 253 Pfam PF00455 DeoR C terminal sensor domain 75 233 1.6E-53 T 17-10-2018 IPR014036 DeoR C-terminal sensor domain FORC55_0051 1c7dc2e42e17eff6a8b24756523a9d21 370 SMART SM00876 256 359 5.3E-34 T 17-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 FORC55_0051 1c7dc2e42e17eff6a8b24756523a9d21 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 2.8E-172 T 17-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 FORC55_0051 1c7dc2e42e17eff6a8b24756523a9d21 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 1.8E-24 T 17-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 FORC55_0051 1c7dc2e42e17eff6a8b24756523a9d21 370 SUPERFAMILY SSF102114 37 333 1.2E-52 T 17-10-2018 FORC55_0051 1c7dc2e42e17eff6a8b24756523a9d21 370 Gene3D G3DSA:3.20.20.70 14 367 2.0E-106 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0051 1c7dc2e42e17eff6a8b24756523a9d21 370 Pfam PF04055 Radical SAM superfamily 81 221 3.4E-10 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_2771 60e48b56e5f12c0d88b5686352b3c530 414 Gene3D G3DSA:3.40.390.10 24 247 3.4E-7 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 FORC55_2771 60e48b56e5f12c0d88b5686352b3c530 414 SUPERFAMILY SSF55486 22 249 7.59E-17 T 17-10-2018 FORC55_2771 60e48b56e5f12c0d88b5686352b3c530 414 Pfam PF01483 Proprotein convertase P-domain 332 412 3.2E-19 T 17-10-2018 IPR002884 P domain GO:0004252|GO:0006508 FORC55_2771 60e48b56e5f12c0d88b5686352b3c530 414 SUPERFAMILY SSF49785 308 412 1.23E-15 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_2771 60e48b56e5f12c0d88b5686352b3c530 414 Gene3D G3DSA:2.60.120.260 326 413 1.3E-8 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_2771 60e48b56e5f12c0d88b5686352b3c530 414 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 45 192 3.4E-30 T 17-10-2018 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 SUPERFAMILY SSF88723 7 170 5.89E-57 T 17-10-2018 IPR029060 PIN-like domain superfamily FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Pfam PF01612 3'-5' exonuclease 335 521 2.4E-39 T 17-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 SUPERFAMILY SSF47807 171 290 9.12E-32 T 17-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Gene3D G3DSA:1.10.150.20 174 253 4.6E-96 T 17-10-2018 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Gene3D G3DSA:3.30.420.10 332 547 1.0E-68 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Pfam PF00476 DNA polymerase family A 557 931 2.9E-156 T 17-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 TIGRFAM TIGR00593 pola: DNA polymerase I 9 934 5.3E-286 T 17-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 SMART SM00474 335 522 6.6E-40 T 17-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 SMART SM00475 7 267 6.2E-127 T 17-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 748 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 818 829 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 784 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 807 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 683 698 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 728 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 881 894 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 850 866 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 682 2.4E-78 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 SUPERFAMILY SSF56672 527 934 7.56E-160 T 17-10-2018 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 SUPERFAMILY SSF53098 338 523 8.28E-54 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 ProSitePatterns PS00447 DNA polymerase family A signature. 759 778 - T 17-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 SMART SM00482 691 898 4.4E-117 T 17-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.2E-54 T 17-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.8E-30 T 17-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 SMART SM00279 173 208 7.2E-14 T 17-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Gene3D G3DSA:1.20.1060.10 548 663 6.7E-42 T 17-10-2018 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Gene3D G3DSA:1.10.150.20 714 857 1.3E-113 T 17-10-2018 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Gene3D G3DSA:3.30.70.370 669 930 1.3E-113 T 17-10-2018 FORC55_0089 9aba61eaf8d40d911e65210b50b949ea 934 Gene3D G3DSA:3.40.50.1010 9 284 4.6E-96 T 17-10-2018 FORC55_0653 d6efd275cd5e325e39ea31cde08de274 201 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 67 199 1.9E-38 T 17-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal FORC55_0653 d6efd275cd5e325e39ea31cde08de274 201 SMART SM00858 79 141 2.4E-8 T 17-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 FORC55_0653 d6efd275cd5e325e39ea31cde08de274 201 Pfam PF13144 Chaperone for flagella basal body P-ring formation 2 199 1.7E-51 T 17-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal FORC55_0653 d6efd275cd5e325e39ea31cde08de274 201 Gene3D G3DSA:2.30.30.760 141 201 1.0E-11 T 17-10-2018 FORC55_1310 d51c4caf2376807e723df6731022ee45 65 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 33 2.7E-6 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal FORC55_1310 d51c4caf2376807e723df6731022ee45 65 PIRSF PIRSF036704 1 65 7.6E-34 T 17-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing FORC55_1310 d51c4caf2376807e723df6731022ee45 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 3.5E-25 T 17-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing FORC55_1310 d51c4caf2376807e723df6731022ee45 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 30 8.6E-6 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal FORC55_0409 fff80ce34d6739197dfe92395a0f518c 206 Gene3D G3DSA:1.10.10.880 2 67 7.6E-23 T 17-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 FORC55_0409 fff80ce34d6739197dfe92395a0f518c 206 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 137 189 3.7E-20 T 17-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal FORC55_0409 fff80ce34d6739197dfe92395a0f518c 206 PIRSF PIRSF016938 1 201 4.0E-34 T 17-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 FORC55_0409 fff80ce34d6739197dfe92395a0f518c 206 SUPERFAMILY SSF89069 4 67 9.81E-21 T 17-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 FORC55_0409 fff80ce34d6739197dfe92395a0f518c 206 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 98 4.8E-33 T 17-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 FORC55_2541 21485c7c8cdf908941339529fb11fa7c 381 SUPERFAMILY SSF160355 63 338 2.62E-65 T 17-10-2018 FORC55_2541 21485c7c8cdf908941339529fb11fa7c 381 Pfam PF13807 G-rich domain on putative tyrosine kinase 332 368 2.2E-7 T 17-10-2018 IPR032807 Tyrosine kinase, G-rich domain FORC55_2541 21485c7c8cdf908941339529fb11fa7c 381 Gene3D G3DSA:1.10.287.210 221 319 7.8E-19 T 17-10-2018 FORC55_2541 21485c7c8cdf908941339529fb11fa7c 381 Pfam PF02706 Chain length determinant protein 24 106 1.9E-17 T 17-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 FORC55_2541 21485c7c8cdf908941339529fb11fa7c 381 Gene3D G3DSA:3.30.1890.10 52 220 4.0E-30 T 17-10-2018 FORC55_0164 55c7047e91f0b4740786f46d195dc0cb 182 Gene3D G3DSA:3.90.79.10 7 182 3.4E-48 T 17-10-2018 FORC55_0164 55c7047e91f0b4740786f46d195dc0cb 182 PRINTS PR00502 NUDIX hydrolase family signature 89 104 4.7E-5 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 FORC55_0164 55c7047e91f0b4740786f46d195dc0cb 182 PRINTS PR00502 NUDIX hydrolase family signature 75 89 4.7E-5 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 FORC55_0164 55c7047e91f0b4740786f46d195dc0cb 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 FORC55_0164 55c7047e91f0b4740786f46d195dc0cb 182 Pfam PF00293 NUDIX domain 47 155 1.0E-15 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_0164 55c7047e91f0b4740786f46d195dc0cb 182 SUPERFAMILY SSF55811 4 177 2.3E-40 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_0982 434900c50159db3a9ba67e362697301d 691 Pfam PF06733 DEAD_2 196 262 2.6E-5 T 17-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 FORC55_0982 434900c50159db3a9ba67e362697301d 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.633 T 17-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 FORC55_0982 434900c50159db3a9ba67e362697301d 691 Gene3D G3DSA:3.40.50.300 27 305 6.1E-38 T 17-10-2018 FORC55_0982 434900c50159db3a9ba67e362697301d 691 SUPERFAMILY SSF52540 203 665 9.71E-7 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0982 434900c50159db3a9ba67e362697301d 691 Pfam PF13307 Helicase C-terminal domain 526 684 5.6E-37 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 FORC55_0982 434900c50159db3a9ba67e362697301d 691 Gene3D G3DSA:3.40.50.300 501 690 3.5E-33 T 17-10-2018 FORC55_0982 434900c50159db3a9ba67e362697301d 691 SMART SM00491 535 671 4.3E-29 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 FORC55_0982 434900c50159db3a9ba67e362697301d 691 SUPERFAMILY SSF52540 16 666 8.46E-15 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2547 e39f73b593b2cbd53ed9b71eb46bd790 349 Gene3D G3DSA:3.40.50.2000 24 177 4.9E-16 T 17-10-2018 FORC55_2547 e39f73b593b2cbd53ed9b71eb46bd790 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 105 327 9.2E-17 T 17-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 FORC55_2547 e39f73b593b2cbd53ed9b71eb46bd790 349 Gene3D G3DSA:3.40.50.2000 185 340 7.6E-17 T 17-10-2018 FORC55_2547 e39f73b593b2cbd53ed9b71eb46bd790 349 SUPERFAMILY SSF53756 30 335 1.15E-43 T 17-10-2018 FORC55_1696 11d47848017bd02973559dbd8cc28cad 533 Pfam PF00072 Response regulator receiver domain 7 117 6.0E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1696 11d47848017bd02973559dbd8cc28cad 533 SUPERFAMILY SSF141868 287 532 1.83E-61 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_1696 11d47848017bd02973559dbd8cc28cad 533 Pfam PF00563 EAL domain 287 519 3.1E-60 T 17-10-2018 IPR001633 EAL domain FORC55_1696 11d47848017bd02973559dbd8cc28cad 533 Gene3D G3DSA:3.40.50.2300 1 134 2.3E-29 T 17-10-2018 FORC55_1696 11d47848017bd02973559dbd8cc28cad 533 SUPERFAMILY SSF52172 4 136 7.26E-29 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1696 11d47848017bd02973559dbd8cc28cad 533 SMART SM00052 272 525 1.5E-48 T 17-10-2018 IPR001633 EAL domain FORC55_1696 11d47848017bd02973559dbd8cc28cad 533 SMART SM00448 5 117 1.8E-16 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1696 11d47848017bd02973559dbd8cc28cad 533 Gene3D G3DSA:3.20.20.450 284 533 2.6E-63 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0302 ae1a8c36dede30f90c9f333e24a65300 130 Gene3D G3DSA:3.30.1370.30 2 72 1.4E-26 T 17-10-2018 FORC55_0302 ae1a8c36dede30f90c9f333e24a65300 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.287 T 17-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0302 ae1a8c36dede30f90c9f333e24a65300 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 17-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0302 ae1a8c36dede30f90c9f333e24a65300 130 Gene3D G3DSA:3.30.1490.10 73 130 3.9E-25 T 17-10-2018 FORC55_0302 ae1a8c36dede30f90c9f333e24a65300 130 SUPERFAMILY SSF56047 2 129 2.35E-44 T 17-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0302 ae1a8c36dede30f90c9f333e24a65300 130 Pfam PF00410 Ribosomal protein S8 5 129 1.7E-47 T 17-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_3520 c8c753cfaa295e74210880889e5e12a2 447 SUPERFAMILY SSF109604 3 216 6.49E-15 T 17-10-2018 FORC55_3520 c8c753cfaa295e74210880889e5e12a2 447 Pfam PF13487 HD domain 116 173 6.2E-10 T 17-10-2018 FORC55_3520 c8c753cfaa295e74210880889e5e12a2 447 Pfam PF13487 HD domain 320 382 9.1E-17 T 17-10-2018 FORC55_3520 c8c753cfaa295e74210880889e5e12a2 447 SMART SM00471 265 400 3.9E-12 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_3520 c8c753cfaa295e74210880889e5e12a2 447 SUPERFAMILY SSF109604 256 430 7.95E-36 T 17-10-2018 FORC55_3520 c8c753cfaa295e74210880889e5e12a2 447 Gene3D G3DSA:1.10.3210.10 249 437 2.8E-58 T 17-10-2018 FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 SUPERFAMILY SSF56519 57 253 4.05E-57 T 17-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 Gene3D G3DSA:3.30.1390.30 86 161 3.2E-54 T 17-10-2018 FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 Gene3D G3DSA:3.40.710.10 250 633 1.5E-93 T 17-10-2018 FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 53.107 T 17-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 1.2E-238 T 17-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 1.6E-75 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 Gene3D G3DSA:3.90.1310.10 65 249 3.2E-54 T 17-10-2018 FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 SUPERFAMILY SSF56601 255 619 2.33E-94 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_1823 01e8920874dc574795fa4d49ac9ac677 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 6.2E-50 T 17-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 396 9.3E-164 T 17-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 PIRSF PIRSF006205 1 402 1.6E-153 T 17-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 46.666 T 17-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 Gene3D G3DSA:3.40.50.720 1 150 8.9E-54 T 17-10-2018 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 SUPERFAMILY SSF55347 126 274 2.13E-62 T 17-10-2018 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 3.3E-38 T 17-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 SUPERFAMILY SSF69055 302 399 1.11E-28 T 17-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 Gene3D G3DSA:1.10.1740.10 312 402 1.3E-26 T 17-10-2018 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 SUPERFAMILY SSF51735 2 150 3.01E-48 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.4E-47 T 17-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 FORC55_0607 4a2a6a726a900a38ac5ae8f27fabfe7b 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.3E-36 T 17-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 FORC55_3473 dfc247ef4db9889d110e3d4a89d8ac22 316 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 268 1.4E-76 T 17-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 FORC55_3473 dfc247ef4db9889d110e3d4a89d8ac22 316 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.2E-13 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_3473 dfc247ef4db9889d110e3d4a89d8ac22 316 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.2E-13 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_3473 dfc247ef4db9889d110e3d4a89d8ac22 316 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 73 84 1.2E-13 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_3473 dfc247ef4db9889d110e3d4a89d8ac22 316 Gene3D G3DSA:3.40.710.10 19 314 1.4E-68 T 17-10-2018 FORC55_3473 dfc247ef4db9889d110e3d4a89d8ac22 316 SUPERFAMILY SSF56601 10 284 1.23E-60 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 SMART SM00278 566 585 13.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 SMART SM00278 534 553 0.25 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 SUPERFAMILY SSF46600 168 221 1.31E-12 T 17-10-2018 IPR036876 UVR domain superfamily FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 Gene3D G3DSA:3.30.420.340 358 530 3.2E-46 T 17-10-2018 IPR038476 UvrC homology region 2 superfamily FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 SUPERFAMILY SSF47781 499 587 6.67E-20 T 17-10-2018 IPR010994 RuvA domain 2-like FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 365 520 9.9E-45 T 17-10-2018 IPR001162 UvrC family homology region FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 Pfam PF02151 UvrB/uvrC motif 185 216 2.7E-9 T 17-10-2018 IPR001943 UVR domain GO:0005515 FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 Pfam PF14520 Helix-hairpin-helix domain 536 587 4.5E-10 T 17-10-2018 FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 567 5.5E-207 T 17-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 585 26.656 T 17-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 SMART SM00465 1 76 1.1E-14 T 17-10-2018 IPR000305 GIY-YIG endonuclease FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 Pfam PF01541 GIY-YIG catalytic domain 2 71 2.0E-9 T 17-10-2018 IPR000305 GIY-YIG endonuclease FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 Gene3D G3DSA:3.40.1440.10 1 80 1.1E-25 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 SUPERFAMILY SSF82771 1 78 1.44E-19 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 FORC55_1570 b1a0a10543c62ab7166ade1679f5f6bb 588 Gene3D G3DSA:1.10.150.20 533 588 1.8E-25 T 17-10-2018 FORC55_0199 0484ccd80d9461fcbd36c2bce6cd543e 228 SMART SM00862 148 224 1.4E-18 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_0199 0484ccd80d9461fcbd36c2bce6cd543e 228 Pfam PF00072 Response regulator receiver domain 4 112 1.6E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0199 0484ccd80d9461fcbd36c2bce6cd543e 228 SUPERFAMILY SSF46894 125 225 8.79E-24 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_0199 0484ccd80d9461fcbd36c2bce6cd543e 228 SUPERFAMILY SSF52172 1 119 3.56E-38 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0199 0484ccd80d9461fcbd36c2bce6cd543e 228 Gene3D G3DSA:3.40.50.2300 1 125 1.1E-36 T 17-10-2018 FORC55_0199 0484ccd80d9461fcbd36c2bce6cd543e 228 SMART SM00448 2 111 4.5E-43 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0199 0484ccd80d9461fcbd36c2bce6cd543e 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.4E-19 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_0199 0484ccd80d9461fcbd36c2bce6cd543e 228 Gene3D G3DSA:1.10.10.10 126 228 2.7E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 Gene3D G3DSA:2.60.120.10 6 142 1.1E-22 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 SMART SM00100 17 134 2.8E-7 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 SMART SM00116 233 280 3.1E-6 T 17-10-2018 IPR000644 CBS domain FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 SMART SM00116 159 216 1.5 T 17-10-2018 IPR000644 CBS domain FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 4.3E-47 T 17-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 117 2.4E-12 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 SUPERFAMILY SSF51206 7 134 4.58E-26 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 SUPERFAMILY SSF54631 146 278 1.77E-27 T 17-10-2018 FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 Gene3D G3DSA:3.10.580.10 143 283 1.5E-32 T 17-10-2018 FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 Pfam PF00571 CBS domain 152 215 1.1E-8 T 17-10-2018 IPR000644 CBS domain FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 Pfam PF00571 CBS domain 226 278 2.7E-10 T 17-10-2018 IPR000644 CBS domain FORC55_1500 f98f9c7472335ab87682c228d8738cd3 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 622 9.7E-46 T 17-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 17-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 7.5E-174 T 17-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 SUPERFAMILY SSF53067 3 195 7.12E-67 T 17-10-2018 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.7E-45 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.7E-45 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.7E-45 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.7E-45 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.7E-45 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.7E-45 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 192.734 T 17-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 17-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 SUPERFAMILY SSF53067 155 395 3.79E-87 T 17-10-2018 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 Pfam PF00871 Acetokinase family 5 390 1.6E-168 T 17-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 Gene3D G3DSA:3.30.420.40 2 194 7.6E-76 T 17-10-2018 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 Gene3D G3DSA:3.30.420.40 195 397 1.7E-82 T 17-10-2018 FORC55_1685 be136432e06237a16fe140f2ebeb3a1e 398 PIRSF PIRSF000722 1 398 4.2E-150 T 17-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 SUPERFAMILY SSF51735 137 313 1.63E-35 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 7.9E-74 T 17-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 PIRSF PIRSF000203 1 511 6.6E-271 T 17-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 Gene3D G3DSA:3.40.50.720 137 318 2.7E-159 T 17-10-2018 FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 4.3E-49 T 17-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 Gene3D G3DSA:3.40.50.720 3 365 2.7E-159 T 17-10-2018 FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 SMART SM01002 146 311 7.6E-81 T 17-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 SMART SM01003 4 137 3.9E-74 T 17-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 17-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 428 511 1.5E-36 T 17-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 SUPERFAMILY SSF52283 1 168 5.7E-55 T 17-10-2018 FORC55_3197 140ce334da1d9f685f4c81c9a2e4c489 512 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 512 3.1E-275 T 17-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 FORC55_1927 8c86cd63fb55966fa703b27935f265a4 262 Pfam PF13503 Domain of unknown function (DUF4123) 7 117 4.1E-24 T 17-10-2018 IPR025391 Domain of unknown function DUF4123 FORC55_0632 cd045872431b01eeaadacc5c38bfb746 212 Pfam PF00551 Formyl transferase 3 182 2.8E-64 T 17-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0632 cd045872431b01eeaadacc5c38bfb746 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 1.0E-77 T 17-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 FORC55_0632 cd045872431b01eeaadacc5c38bfb746 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.319 T 17-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 FORC55_0632 cd045872431b01eeaadacc5c38bfb746 212 SUPERFAMILY SSF53328 4 198 4.97E-65 T 17-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0632 cd045872431b01eeaadacc5c38bfb746 212 Gene3D G3DSA:3.40.50.170 3 212 3.6E-85 T 17-10-2018 FORC55_0632 cd045872431b01eeaadacc5c38bfb746 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 17-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 43.7 T 17-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 Pfam PF00570 HRDC domain 213 279 1.5E-7 T 17-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 Gene3D G3DSA:1.10.150.80 195 292 1.9E-16 T 17-10-2018 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 SUPERFAMILY SSF47819 193 300 4.19E-21 T 17-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 SUPERFAMILY SSF47819 296 371 7.85E-21 T 17-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 Pfam PF01612 3'-5' exonuclease 3 170 1.3E-34 T 17-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 SUPERFAMILY SSF53098 2 209 1.26E-64 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 Gene3D G3DSA:1.10.150.80 294 373 4.6E-26 T 17-10-2018 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 372 2.4E-162 T 17-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 SMART SM00474 3 171 1.1E-38 T 17-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 FORC55_0857 7b3d537a7b93f8c71c1eaccc8843fdb6 373 Gene3D G3DSA:3.30.420.10 1 194 2.2E-63 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_2263 7d242838d2573c5a1f62958877fef5bf 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 2.8E-20 T 17-10-2018 FORC55_2263 7d242838d2573c5a1f62958877fef5bf 316 SUPERFAMILY SSF50129 4 154 2.13E-35 T 17-10-2018 IPR011032 GroES-like superfamily FORC55_2263 7d242838d2573c5a1f62958877fef5bf 316 SMART SM00829 12 312 3.5E-14 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 FORC55_2263 7d242838d2573c5a1f62958877fef5bf 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 92 3.1E-6 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 FORC55_2263 7d242838d2573c5a1f62958877fef5bf 316 Gene3D G3DSA:3.90.180.10 10 310 2.3E-95 T 17-10-2018 FORC55_2263 7d242838d2573c5a1f62958877fef5bf 316 Gene3D G3DSA:3.40.50.720 133 263 2.3E-95 T 17-10-2018 FORC55_2263 7d242838d2573c5a1f62958877fef5bf 316 SUPERFAMILY SSF51735 122 245 1.36E-29 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2206 7e200939bb882397070fea1384fc2f1f 574 SUPERFAMILY SSF81296 2 91 4.27E-17 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_2206 7e200939bb882397070fea1384fc2f1f 574 Pfam PF00759 Glycosyl hydrolase family 9 100 503 2.5E-22 T 17-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 FORC55_2206 7e200939bb882397070fea1384fc2f1f 574 SUPERFAMILY SSF48208 78 564 1.16E-93 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 FORC55_2206 7e200939bb882397070fea1384fc2f1f 574 Gene3D G3DSA:2.60.40.10 1 93 1.6E-23 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2206 7e200939bb882397070fea1384fc2f1f 574 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 1.3E-11 T 17-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 FORC55_2206 7e200939bb882397070fea1384fc2f1f 574 Gene3D G3DSA:1.50.10.10 94 574 1.8E-226 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 FORC55_0566 52adbef953125e9ed441ec9ca63e3d2b 106 SUPERFAMILY SSF82657 1 89 4.05E-32 T 17-10-2018 IPR036065 BolA-like superfamily FORC55_0566 52adbef953125e9ed441ec9ca63e3d2b 106 PIRSF PIRSF003113 1 99 2.6E-39 T 17-10-2018 IPR002634 BolA protein FORC55_0566 52adbef953125e9ed441ec9ca63e3d2b 106 Pfam PF01722 BolA-like protein 10 83 3.5E-31 T 17-10-2018 IPR002634 BolA protein FORC55_0566 52adbef953125e9ed441ec9ca63e3d2b 106 Gene3D G3DSA:3.30.300.90 1 89 3.0E-35 T 17-10-2018 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 5.2E-200 T 17-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 Gene3D G3DSA:1.10.730.10 389 526 1.6E-34 T 17-10-2018 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 Pfam PF01588 Putative tRNA binding domain 588 680 6.3E-25 T 17-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 Gene3D G3DSA:2.40.50.140 573 683 5.9E-35 T 17-10-2018 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 SUPERFAMILY SSF47323 389 546 3.36E-45 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 Gene3D G3DSA:3.40.50.620 9 384 1.9E-160 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 Pfam PF09334 tRNA synthetases class I (M) 9 396 4.2E-164 T 17-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 682 1.4E-47 T 17-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.6E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.6E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.6E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.6E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.6E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.6E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 SUPERFAMILY SSF52374 4 387 1.02E-100 T 17-10-2018 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 Gene3D G3DSA:2.20.28.20 142 176 1.9E-160 T 17-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 SUPERFAMILY SSF50249 578 682 1.05E-32 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.386 T 17-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_1746 0a294711b64b9942aa2286f099b6673e 683 SUPERFAMILY SSF57770 142 176 5.89E-13 T 17-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 Gene3D G3DSA:3.40.50.970 365 544 2.0E-126 T 17-10-2018 FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 SUPERFAMILY SSF52467 190 363 1.08E-62 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 17-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 SUPERFAMILY SSF52518 372 566 2.95E-66 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 4.8E-59 T 17-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 Gene3D G3DSA:3.40.50.970 1 179 2.1E-74 T 17-10-2018 FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 1.4E-48 T 17-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 330 1.4E-45 T 17-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 Gene3D G3DSA:3.40.50.1220 201 364 2.0E-126 T 17-10-2018 FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 SUPERFAMILY SSF52518 1 178 2.57E-65 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0394 d069770861d8f8941639df6eecd0ab7c 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 3.3E-270 T 17-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 FORC55_1828 395b1ef428608d0e16e21cdc81593de3 195 Pfam PF03099 Biotin/lipoate A/B protein ligase family 37 137 1.8E-8 T 17-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 FORC55_1828 395b1ef428608d0e16e21cdc81593de3 195 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 5 180 4.8E-71 T 17-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 FORC55_1828 395b1ef428608d0e16e21cdc81593de3 195 Hamap MF_00013 Octanoyltransferase [lipB]. 1 183 33.391 T 17-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 FORC55_1828 395b1ef428608d0e16e21cdc81593de3 195 SUPERFAMILY SSF55681 1 182 2.57E-64 T 17-10-2018 FORC55_1828 395b1ef428608d0e16e21cdc81593de3 195 Gene3D G3DSA:3.30.930.10 1 181 2.1E-59 T 17-10-2018 FORC55_1828 395b1ef428608d0e16e21cdc81593de3 195 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 49 64 - T 17-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 FORC55_1828 395b1ef428608d0e16e21cdc81593de3 195 PIRSF PIRSF016262 1 194 8.4E-58 T 17-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 FORC55_1828 395b1ef428608d0e16e21cdc81593de3 195 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 53 106 4.0E-25 T 17-10-2018 FORC55_0530 5a5ea2ef62943e9bfc8f27ed1b5ec68b 561 Pfam PF00501 AMP-binding enzyme 23 440 5.7E-87 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_0530 5a5ea2ef62943e9bfc8f27ed1b5ec68b 561 Gene3D G3DSA:3.40.50.12780 16 433 5.7E-84 T 17-10-2018 FORC55_0530 5a5ea2ef62943e9bfc8f27ed1b5ec68b 561 SUPERFAMILY SSF56801 15 547 9.42E-109 T 17-10-2018 FORC55_0530 5a5ea2ef62943e9bfc8f27ed1b5ec68b 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.614 T 17-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 SUPERFAMILY SSF64158 78 308 2.88E-82 T 17-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 Gene3D G3DSA:3.40.720.10 6 507 1.1E-213 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 Gene3D G3DSA:3.40.1450.10 78 310 1.1E-213 T 17-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 1.5E-80 T 17-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 PIRSF PIRSF001492 1 510 2.4E-204 T 17-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 SUPERFAMILY SSF53649 5 509 9.95E-79 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 4.0E-229 T 17-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 FORC55_2448 45ef735f25c21678def727a55b54fa3f 510 Pfam PF01676 Metalloenzyme superfamily 5 495 4.4E-83 T 17-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 FORC55_0183 0a9337da9081babd441d3c1666c82d38 207 SUPERFAMILY SSF52540 3 189 1.13E-70 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0183 0a9337da9081babd441d3c1666c82d38 207 SMART SM00072 3 187 5.1E-73 T 17-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit FORC55_0183 0a9337da9081babd441d3c1666c82d38 207 Gene3D G3DSA:3.40.50.300 8 183 1.8E-73 T 17-10-2018 FORC55_0183 0a9337da9081babd441d3c1666c82d38 207 Gene3D G3DSA:3.30.63.10 37 96 1.8E-73 T 17-10-2018 FORC55_0183 0a9337da9081babd441d3c1666c82d38 207 Pfam PF00625 Guanylate kinase 5 185 1.1E-59 T 17-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit FORC55_0183 0a9337da9081babd441d3c1666c82d38 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.5E-75 T 17-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 FORC55_0183 0a9337da9081babd441d3c1666c82d38 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 17-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 FORC55_0183 0a9337da9081babd441d3c1666c82d38 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.662 T 17-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 FORC55_1226 ce38db6e57ddb7abe36c1b09f3dd2a9e 382 Pfam PF12698 ABC-2 family transporter protein 20 368 2.0E-41 T 17-10-2018 FORC55_1226 ce38db6e57ddb7abe36c1b09f3dd2a9e 382 Gene3D G3DSA:3.40.1710.10 40 120 2.0E-5 T 17-10-2018 FORC55_2006 48b2d7d8303e8f7b7f35fc245e0ad78d 149 Gene3D G3DSA:3.10.580.10 1 149 3.6E-58 T 17-10-2018 FORC55_2006 48b2d7d8303e8f7b7f35fc245e0ad78d 149 Pfam PF00571 CBS domain 79 127 2.8E-8 T 17-10-2018 IPR000644 CBS domain FORC55_2006 48b2d7d8303e8f7b7f35fc245e0ad78d 149 Pfam PF00571 CBS domain 4 58 1.2E-12 T 17-10-2018 IPR000644 CBS domain FORC55_2006 48b2d7d8303e8f7b7f35fc245e0ad78d 149 SMART SM00116 11 59 1.1E-6 T 17-10-2018 IPR000644 CBS domain FORC55_2006 48b2d7d8303e8f7b7f35fc245e0ad78d 149 SMART SM00116 84 131 5.0E-6 T 17-10-2018 IPR000644 CBS domain FORC55_2006 48b2d7d8303e8f7b7f35fc245e0ad78d 149 SUPERFAMILY SSF54631 1 132 9.73E-32 T 17-10-2018 FORC55_0314 ce33e3797318e45280fde094b380d2c4 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.737 T 17-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0314 ce33e3797318e45280fde094b380d2c4 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.4E-49 T 17-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0314 ce33e3797318e45280fde094b380d2c4 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 17-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0314 ce33e3797318e45280fde094b380d2c4 128 Gene3D G3DSA:3.90.1030.10 1 117 3.0E-48 T 17-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0314 ce33e3797318e45280fde094b380d2c4 128 SUPERFAMILY SSF64263 1 119 3.4E-51 T 17-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0314 ce33e3797318e45280fde094b380d2c4 128 Pfam PF01196 Ribosomal protein L17 20 116 7.6E-35 T 17-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2185 8a92914b423ad442f41894ef6635901d 278 Gene3D G3DSA:3.20.20.20 3 277 8.0E-114 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2185 8a92914b423ad442f41894ef6635901d 278 Pfam PF00809 Pterin binding enzyme 19 259 7.2E-91 T 17-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2185 8a92914b423ad442f41894ef6635901d 278 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 18 33 - T 17-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2185 8a92914b423ad442f41894ef6635901d 278 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 273 1.9E-106 T 17-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 FORC55_2185 8a92914b423ad442f41894ef6635901d 278 SUPERFAMILY SSF51717 10 276 1.44E-106 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_2185 8a92914b423ad442f41894ef6635901d 278 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 17-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 SMART SM00421 144 201 3.6E-22 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 4.6E-21 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 SUPERFAMILY SSF46894 130 203 2.93E-20 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 Pfam PF00072 Response regulator receiver domain 5 116 6.9E-30 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.1E-13 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.1E-13 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.1E-13 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 Gene3D G3DSA:3.40.50.12740 3 205 1.2E-65 T 17-10-2018 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 SMART SM00448 3 116 4.3E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3314 c462ecaf4cf490ba07cc09300a2ac4c9 207 SUPERFAMILY SSF52172 2 134 1.15E-35 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 PRINTS PR01398 Isochorismatase signature 61 78 3.4E-50 T 17-10-2018 IPR016291 Isochorismatase GO:0008908 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 PRINTS PR01398 Isochorismatase signature 107 129 3.4E-50 T 17-10-2018 IPR016291 Isochorismatase GO:0008908 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 PRINTS PR01398 Isochorismatase signature 2 14 3.4E-50 T 17-10-2018 IPR016291 Isochorismatase GO:0008908 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 PRINTS PR01398 Isochorismatase signature 181 198 3.4E-50 T 17-10-2018 IPR016291 Isochorismatase GO:0008908 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 PRINTS PR01398 Isochorismatase signature 78 97 3.4E-50 T 17-10-2018 IPR016291 Isochorismatase GO:0008908 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 PRINTS PR01398 Isochorismatase signature 163 181 3.4E-50 T 17-10-2018 IPR016291 Isochorismatase GO:0008908 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 Gene3D G3DSA:1.10.1200.10 210 288 4.0E-19 T 17-10-2018 IPR036736 ACP-like superfamily FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 Pfam PF00550 Phosphopantetheine attachment site 224 279 1.3E-7 T 17-10-2018 IPR009081 Phosphopantetheine binding ACP domain FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 SUPERFAMILY SSF52499 2 206 3.79E-58 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 PIRSF PIRSF001111 1 291 2.1E-125 T 17-10-2018 IPR016291 Isochorismatase GO:0008908 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 Gene3D G3DSA:3.40.50.850 1 206 6.5E-86 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 SUPERFAMILY SSF47336 219 288 6.94E-10 T 17-10-2018 IPR036736 ACP-like superfamily FORC55_1972 96ee8dabaa4c92ea4ac5876285dfdc7f 293 Pfam PF00857 Isochorismatase family 30 200 2.1E-35 T 17-10-2018 IPR000868 Isochorismatase-like GO:0003824 FORC55_2712 4395b7542b9dbbffe415218f8a026569 462 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 411 427 - T 17-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 FORC55_2712 4395b7542b9dbbffe415218f8a026569 462 Pfam PF00939 Sodium:sulfate symporter transmembrane region 22 462 1.8E-54 T 17-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 FORC55_2712 4395b7542b9dbbffe415218f8a026569 462 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 461 5.3E-113 T 17-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 Pfam PF00672 HAMP domain 207 249 1.2E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 Pfam PF17200 Single Cache domain 2 42 182 7.8E-28 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 501 2.3E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 SMART SM01049 36 126 3.9E-25 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 SMART SM00304 260 312 31.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 SMART SM00304 207 259 9.2E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 SUPERFAMILY SSF58104 227 536 2.75E-69 T 17-10-2018 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 Gene3D G3DSA:1.10.287.950 207 536 4.8E-72 T 17-10-2018 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 Gene3D G3DSA:3.30.450.20 38 183 2.3E-33 T 17-10-2018 FORC55_1544 745a6b110be098c9e464022bc62971a8 536 SMART SM00283 274 535 1.4E-64 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0116 b5e66884eb353eb317a1bb3bad483af7 122 Pfam PF13643 Domain of unknown function (DUF4145) 12 76 5.1E-5 T 17-10-2018 IPR025285 Domain of unknown function DUF4145 FORC55_1512 784c93b7983ab69de8eb5dca5aea1564 233 SUPERFAMILY SSF51055 189 232 2.75E-14 T 17-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1512 784c93b7983ab69de8eb5dca5aea1564 233 Gene3D G3DSA:2.10.10.90 139 233 6.7E-39 T 17-10-2018 FORC55_1512 784c93b7983ab69de8eb5dca5aea1564 233 Gene3D G3DSA:3.20.20.370 1 138 5.1E-48 T 17-10-2018 FORC55_1512 784c93b7983ab69de8eb5dca5aea1564 233 SUPERFAMILY SSF88713 19 142 9.21E-8 T 17-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 FORC55_1512 784c93b7983ab69de8eb5dca5aea1564 233 SMART SM00495 138 184 2.5E-4 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1512 784c93b7983ab69de8eb5dca5aea1564 233 SMART SM00495 187 233 4.8 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1512 784c93b7983ab69de8eb5dca5aea1564 233 SUPERFAMILY SSF51055 140 183 1.7E-14 T 17-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_3086 ced3a0fa0a294099e18d588a661c4c9a 165 Gene3D G3DSA:3.40.630.30 2 162 4.4E-40 T 17-10-2018 FORC55_3086 ced3a0fa0a294099e18d588a661c4c9a 165 SUPERFAMILY SSF55729 3 160 6.97E-36 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3086 ced3a0fa0a294099e18d588a661c4c9a 165 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 3.2E-18 T 17-10-2018 IPR000182 GNAT domain FORC55_3140 ced3a0fa0a294099e18d588a661c4c9a 165 Gene3D G3DSA:3.40.630.30 2 162 4.4E-40 T 17-10-2018 FORC55_3140 ced3a0fa0a294099e18d588a661c4c9a 165 SUPERFAMILY SSF55729 3 160 6.97E-36 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3140 ced3a0fa0a294099e18d588a661c4c9a 165 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 3.2E-18 T 17-10-2018 IPR000182 GNAT domain FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 Gene3D G3DSA:3.40.50.620 194 514 6.0E-111 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 Pfam PF00733 Asparagine synthase 211 366 4.3E-56 T 17-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 1.0E-40 T 17-10-2018 IPR017932 Glutamine amidotransferase type 2 domain FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 SUPERFAMILY SSF56235 1 196 1.97E-57 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 Gene3D G3DSA:3.60.20.10 2 193 6.3E-71 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 PIRSF PIRSF001589 1 377 2.5E-108 T 17-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 PIRSF PIRSF001589 362 511 4.9E-27 T 17-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 2.1E-116 T 17-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 FORC55_1786 7e6f0b0c916eb4d729dbde1e12afa43b 554 SUPERFAMILY SSF52402 210 479 5.03E-73 T 17-10-2018 FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 Gene3D G3DSA:2.40.50.100 292 358 5.5E-13 T 17-10-2018 FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 SUPERFAMILY SSF52540 7 237 3.79E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 357 4.1E-160 T 17-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 SMART SM00382 25 208 1.5E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 Pfam PF00005 ABC transporter 18 158 2.7E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 Pfam PF03459 TOBE domain 293 358 3.6E-18 T 17-10-2018 IPR005116 Transport-associated OB, type 1 FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 Gene3D G3DSA:3.40.50.300 4 242 5.3E-57 T 17-10-2018 FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 SUPERFAMILY SSF50331 236 357 1.46E-18 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_3359 ae5d67e31bf509b4ec43f0090dc14e26 366 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3004 e32436a37bb0f8e6de707576479c011b 99 PIRSF PIRSF029218 1 97 1.4E-31 T 17-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 FORC55_3004 e32436a37bb0f8e6de707576479c011b 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 1.7E-20 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_3004 e32436a37bb0f8e6de707576479c011b 99 Gene3D G3DSA:3.30.2310.20 1 96 3.4E-27 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily FORC55_0066 7b0bd1ae9093f6b7fbaa4cb15381dad5 304 SUPERFAMILY SSF103481 43 144 4.05E-13 T 17-10-2018 FORC55_0066 7b0bd1ae9093f6b7fbaa4cb15381dad5 304 Pfam PF00892 EamA-like transporter family 9 141 5.7E-18 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_0066 7b0bd1ae9093f6b7fbaa4cb15381dad5 304 Pfam PF00892 EamA-like transporter family 155 285 9.9E-18 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_0066 7b0bd1ae9093f6b7fbaa4cb15381dad5 304 SUPERFAMILY SSF103481 189 292 1.7E-11 T 17-10-2018 FORC55_0764 1f9f75a274bcc49327784ed551e442a1 265 Gene3D G3DSA:1.10.3470.10 34 264 2.1E-5 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_0764 1f9f75a274bcc49327784ed551e442a1 265 PRINTS PR00173 Glutamate-aspartate symporter signature 32 57 8.6E-5 T 17-10-2018 FORC55_0764 1f9f75a274bcc49327784ed551e442a1 265 PRINTS PR00173 Glutamate-aspartate symporter signature 219 238 8.6E-5 T 17-10-2018 FORC55_0764 1f9f75a274bcc49327784ed551e442a1 265 PRINTS PR00173 Glutamate-aspartate symporter signature 1 19 8.6E-5 T 17-10-2018 FORC55_0764 1f9f75a274bcc49327784ed551e442a1 265 SUPERFAMILY SSF81345 6 262 3.79E-39 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_0764 1f9f75a274bcc49327784ed551e442a1 265 Pfam PF00950 ABC 3 transport family 6 260 1.3E-72 T 17-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 Pfam PF00158 Sigma-54 interaction domain 137 304 4.2E-73 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 SUPERFAMILY SSF46689 349 486 4.3E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 SMART SM00382 157 301 4.6E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 4.6E-30 T 17-10-2018 IPR010518 Flagellar regulatory FleQ FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 Gene3D G3DSA:3.40.50.2300 1 123 4.9E-10 T 17-10-2018 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 4.5E-14 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 SUPERFAMILY SSF52172 6 182 5.42E-6 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 Gene3D G3DSA:3.40.50.300 125 308 1.8E-67 T 17-10-2018 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.8E-10 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.8E-10 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 Gene3D G3DSA:1.10.8.60 309 385 1.2E-24 T 17-10-2018 FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 SUPERFAMILY SSF52540 137 378 3.52E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0714 5f9b8b4188ae3c218c3491f7dfe48186 488 Gene3D G3DSA:1.10.10.60 420 488 1.4E-12 T 17-10-2018 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 SUPERFAMILY SSF109604 354 493 3.45E-12 T 17-10-2018 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 692 1.0E-291 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.2E-35 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 398 417 1.2E-35 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.2E-35 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.2E-35 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 322 338 1.2E-35 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 Pfam PF05746 DALR anticodon binding domain 585 682 8.0E-10 T 17-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 554 2.4E-202 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_0008 797a5d99bf50881f048824c4054ec806 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 691 25.753 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 Gene3D G3DSA:3.30.565.10 419 555 2.1E-27 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 Pfam PF00672 HAMP domain 162 207 1.4E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 SMART SM00387 458 551 2.3E-11 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 SMART SM00304 160 212 1.6E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 PIRSF PIRSF003167 276 558 2.7E-104 T 17-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 PIRSF PIRSF003167 1 288 1.7E-77 T 17-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 Pfam PF07730 Histidine kinase 349 417 2.3E-18 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 Gene3D G3DSA:1.10.287.130 158 258 2.2E-6 T 17-10-2018 FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 SUPERFAMILY SSF158472 162 209 9.02E-8 T 17-10-2018 FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 549 1.0E-13 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 18 114 2.5E-24 T 17-10-2018 IPR029095 NarX-like, N-terminal FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 SUPERFAMILY SSF55874 427 546 7.2E-19 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3315 45a7b1e3951c6ba99d45b99861962b59 558 Gene3D G3DSA:1.20.120.960 24 132 6.6E-12 T 17-10-2018 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 Gene3D G3DSA:3.40.309.10 814 1006 9.8E-151 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 SUPERFAMILY SSF51730 190 532 3.06E-114 T 17-10-2018 IPR029041 FAD-linked oxidoreductase-like FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 839 850 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 PIRSF PIRSF000197 3 1039 0.0 T 17-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 6.6E-44 T 17-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 Gene3D G3DSA:3.40.605.10 549 1037 9.8E-151 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 SUPERFAMILY SSF81935 17 189 1.15E-61 T 17-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 Pfam PF00171 Aldehyde dehydrogenase family 581 1037 4.5E-119 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 525 1038 2.4E-279 T 17-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 SUPERFAMILY SSF53720 557 1038 3.01E-129 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 Pfam PF01619 Proline dehydrogenase 197 490 3.8E-93 T 17-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 FORC55_3650 bf2b2c01dd0b9c53e9a1c164d5529b1f 1039 Gene3D G3DSA:3.20.20.220 153 525 1.1E-131 T 17-10-2018 FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 Gene3D G3DSA:1.10.3680.10 38 190 4.4E-24 T 17-10-2018 IPR029024 TerB-like FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 PRINTS PR00625 DnaJ domain signature 238 253 3.8E-12 T 17-10-2018 IPR001623 DnaJ domain FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 PRINTS PR00625 DnaJ domain signature 262 282 3.8E-12 T 17-10-2018 IPR001623 DnaJ domain FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 PRINTS PR00625 DnaJ domain signature 220 238 3.8E-12 T 17-10-2018 IPR001623 DnaJ domain FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 Gene3D G3DSA:1.10.287.110 195 282 2.0E-18 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.756 T 17-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 Pfam PF05099 Tellurite resistance protein TerB 45 177 5.8E-17 T 17-10-2018 IPR007791 Co-chaperone DjlA, N-terminal FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 Pfam PF00226 DnaJ domain 218 280 3.7E-14 T 17-10-2018 IPR001623 DnaJ domain FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 SUPERFAMILY SSF46565 138 280 2.41E-34 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 SUPERFAMILY SSF158682 48 181 6.28E-22 T 17-10-2018 IPR029024 TerB-like FORC55_2341 2493aa2a97a85dbeb33d8f7673273bab 284 SMART SM00271 217 282 2.5E-21 T 17-10-2018 IPR001623 DnaJ domain FORC55_2481 246a071ba620beea5bdda93f8b954281 649 Pfam PF00501 AMP-binding enzyme 84 522 5.4E-95 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_2481 246a071ba620beea5bdda93f8b954281 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 5.0E-25 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain FORC55_2481 246a071ba620beea5bdda93f8b954281 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.0E-21 T 17-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 FORC55_2481 246a071ba620beea5bdda93f8b954281 649 SUPERFAMILY SSF56801 8 644 1.44E-184 T 17-10-2018 FORC55_2481 246a071ba620beea5bdda93f8b954281 649 Gene3D G3DSA:3.30.300.30 518 649 1.6E-30 T 17-10-2018 FORC55_2481 246a071ba620beea5bdda93f8b954281 649 Gene3D G3DSA:3.40.50.12780 50 515 5.2E-106 T 17-10-2018 FORC55_2481 246a071ba620beea5bdda93f8b954281 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 17-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 FORC55_2481 246a071ba620beea5bdda93f8b954281 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_2481 246a071ba620beea5bdda93f8b954281 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.733 T 17-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 FORC55_3394 fb191ac53715d4731484be19bb120eac 552 Gene3D G3DSA:3.40.50.300 8 228 3.4E-59 T 17-10-2018 FORC55_3394 fb191ac53715d4731484be19bb120eac 552 SUPERFAMILY SSF52540 18 291 2.09E-20 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3394 fb191ac53715d4731484be19bb120eac 552 SMART SM00382 46 189 1.9E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3394 fb191ac53715d4731484be19bb120eac 552 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 6.6E-23 T 17-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 FORC55_3394 fb191ac53715d4731484be19bb120eac 552 Pfam PF12592 Protein of unknown function (DUF3763) 482 534 1.4E-18 T 17-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 FORC55_3394 fb191ac53715d4731484be19bb120eac 552 Gene3D G3DSA:1.10.8.300 229 299 2.8E-27 T 17-10-2018 FORC55_0082 06fc9a6b98880fd9df4797d2ad555617 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 3.6E-19 T 17-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.0E-8 T 17-10-2018 IPR003004 GspF/PilC family FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.0E-8 T 17-10-2018 IPR003004 GspF/PilC family FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-8 T 17-10-2018 IPR003004 GspF/PilC family FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-8 T 17-10-2018 IPR003004 GspF/PilC family FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 Gene3D G3DSA:1.20.81.30 63 177 8.3E-30 T 17-10-2018 FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 9.3E-26 T 17-10-2018 IPR018076 Type II secretion system F domain FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.1E-29 T 17-10-2018 IPR018076 Type II secretion system F domain FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 Gene3D G3DSA:1.20.81.30 258 371 5.8E-28 T 17-10-2018 FORC55_2383 1164adae4f4d2894af0a4e5a54b47324 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 17-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 FORC55_2043 556f9893effef4a9c33ce7c8c39ced2e 558 Gene3D G3DSA:1.10.1760.20 39 203 4.8E-5 T 17-10-2018 FORC55_2043 556f9893effef4a9c33ce7c8c39ced2e 558 Gene3D G3DSA:3.30.450.40 227 352 5.6E-6 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_2043 556f9893effef4a9c33ce7c8c39ced2e 558 SUPERFAMILY SSF55781 227 351 3.64E-8 T 17-10-2018 FORC55_2043 556f9893effef4a9c33ce7c8c39ced2e 558 SUPERFAMILY SSF55874 420 553 2.66E-9 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2043 556f9893effef4a9c33ce7c8c39ced2e 558 Pfam PF07694 5TMR of 5TMR-LYT 25 193 2.8E-58 T 17-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 FORC55_2043 556f9893effef4a9c33ce7c8c39ced2e 558 Pfam PF13492 GAF domain 242 351 3.2E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_2043 556f9893effef4a9c33ce7c8c39ced2e 558 Gene3D G3DSA:3.30.565.10 417 555 4.5E-12 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2043 556f9893effef4a9c33ce7c8c39ced2e 558 Pfam PF06580 Histidine kinase 366 444 1.2E-27 T 17-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 FORC55_0512 664b0ffb838e04a7beb392557367c171 286 SUPERFAMILY SSF51658 5 280 9.82E-99 T 17-10-2018 IPR036237 Xylose isomerase-like superfamily FORC55_0512 664b0ffb838e04a7beb392557367c171 286 Pfam PF01261 Xylose isomerase-like TIM barrel 23 241 8.0E-41 T 17-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain FORC55_0512 664b0ffb838e04a7beb392557367c171 286 Gene3D G3DSA:3.20.20.150 3 285 3.9E-110 T 17-10-2018 FORC55_0512 664b0ffb838e04a7beb392557367c171 286 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 71 79 - T 17-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 FORC55_0512 664b0ffb838e04a7beb392557367c171 286 Hamap MF_00152 Probable endonuclease 4 [nfo]. 4 281 41.991 T 17-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 FORC55_0512 664b0ffb838e04a7beb392557367c171 286 SMART SM00518 5 281 9.2E-119 T 17-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 FORC55_0512 664b0ffb838e04a7beb392557367c171 286 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 217 233 - T 17-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 FORC55_0512 664b0ffb838e04a7beb392557367c171 286 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 279 9.5E-106 T 17-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 FORC55_0512 664b0ffb838e04a7beb392557367c171 286 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 177 184 - T 17-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 FORC55_0879 4b85e049a5ce7f1649f0aa3cddebeb06 323 SUPERFAMILY SSF53955 8 322 4.22E-102 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_0879 4b85e049a5ce7f1649f0aa3cddebeb06 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 4.5E-112 T 17-10-2018 IPR011970 Lytic murein transglycosylase FORC55_0879 4b85e049a5ce7f1649f0aa3cddebeb06 323 Pfam PF13406 Transglycosylase SLT domain 23 319 3.7E-110 T 17-10-2018 IPR031304 Transglycosylase SLT domain 2 FORC55_0879 4b85e049a5ce7f1649f0aa3cddebeb06 323 Gene3D G3DSA:1.10.8.350 33 199 2.9E-93 T 17-10-2018 FORC55_0879 4b85e049a5ce7f1649f0aa3cddebeb06 323 Gene3D G3DSA:1.10.530.10 66 318 2.9E-93 T 17-10-2018 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 SUPERFAMILY SSF47384 358 439 3.73E-13 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 SMART SM00387 484 592 9.4E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 Gene3D G3DSA:3.30.565.10 440 592 1.3E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 Gene3D G3DSA:3.30.450.20 57 173 5.9E-38 T 17-10-2018 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 SUPERFAMILY SSF55874 437 590 1.96E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 PIRSF PIRSF036431 1 595 1.4E-189 T 17-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 Gene3D G3DSA:3.30.450.20 27 56 3.7E-12 T 17-10-2018 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 Gene3D G3DSA:3.30.450.20 174 284 4.1E-43 T 17-10-2018 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 Gene3D G3DSA:1.10.287.130 349 436 1.5E-20 T 17-10-2018 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 438 6.4E-12 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 5.5E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 2.7E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 2.7E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 2.7E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 2.7E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 SUPERFAMILY SSF103190 48 187 1.02E-29 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_0903 07832bbd50c008972e7d78cf1800b993 597 SMART SM00388 373 441 2.1E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3566 92bb9fdb3f3b563527d39b5f634e7ec4 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 4.0E-105 T 17-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 FORC55_3566 92bb9fdb3f3b563527d39b5f634e7ec4 564 Pfam PF02652 L-lactate permease 7 547 1.5E-107 T 17-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 FORC55_2207 8b2670e04af6e544766f2b550bd5cac3 294 SUPERFAMILY SSF53067 1 111 2.79E-26 T 17-10-2018 FORC55_2207 8b2670e04af6e544766f2b550bd5cac3 294 SUPERFAMILY SSF53067 113 282 2.22E-45 T 17-10-2018 FORC55_2207 8b2670e04af6e544766f2b550bd5cac3 294 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 282 4.4E-53 T 17-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 FORC55_2207 8b2670e04af6e544766f2b550bd5cac3 294 Gene3D G3DSA:3.30.420.40 3 113 3.4E-70 T 17-10-2018 FORC55_2207 8b2670e04af6e544766f2b550bd5cac3 294 Gene3D G3DSA:3.30.420.40 114 260 3.4E-70 T 17-10-2018 FORC55_3316 acaf89977b2e515a6abce4385e26bd01 164 SUPERFAMILY SSF54862 33 159 5.44E-21 T 17-10-2018 FORC55_3316 acaf89977b2e515a6abce4385e26bd01 164 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 24 161 23.358 T 17-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 FORC55_3316 acaf89977b2e515a6abce4385e26bd01 164 Gene3D G3DSA:3.30.70.20 31 83 8.6E-10 T 17-10-2018 FORC55_3316 acaf89977b2e515a6abce4385e26bd01 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_3316 acaf89977b2e515a6abce4385e26bd01 164 Pfam PF12838 4Fe-4S dicluster domain 107 154 1.5E-9 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_3316 acaf89977b2e515a6abce4385e26bd01 164 Pfam PF12838 4Fe-4S dicluster domain 36 80 3.2E-8 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_3316 acaf89977b2e515a6abce4385e26bd01 164 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 156 2.2E-44 T 17-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 FORC55_3316 acaf89977b2e515a6abce4385e26bd01 164 Gene3D G3DSA:3.30.70.20 97 159 5.4E-12 T 17-10-2018 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 8.6E-74 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.8E-42 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.8E-42 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.8E-42 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.8E-42 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.8E-42 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 SUPERFAMILY SSF53098 3 156 2.17E-54 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Gene3D G3DSA:3.30.420.10 2 159 4.7E-51 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 48.104 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.8E-61 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 FORC55_0990 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 17-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 Gene3D G3DSA:3.10.150.10 1 122 2.4E-41 T 17-10-2018 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.6E-37 T 17-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.4E-38 T 17-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 SUPERFAMILY SSF55979 245 366 1.09E-36 T 17-10-2018 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 6.6E-34 T 17-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 PIRSF PIRSF000804 1 366 1.4E-117 T 17-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 Gene3D G3DSA:3.10.150.10 124 247 1.0E-34 T 17-10-2018 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 SUPERFAMILY SSF55979 1 118 1.03E-28 T 17-10-2018 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 Gene3D G3DSA:3.10.150.10 248 366 3.3E-39 T 17-10-2018 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 SMART SM00480 17 362 3.4E-140 T 17-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.8E-107 T 17-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 FORC55_0002 ad92399fad510df729c90ffc3c910c13 366 SUPERFAMILY SSF55979 126 244 1.51E-27 T 17-10-2018 FORC55_2817 1ed294472e7272fafe3a952394470cea 452 Gene3D G3DSA:1.20.1250.20 241 451 8.4E-63 T 17-10-2018 FORC55_2817 1ed294472e7272fafe3a952394470cea 452 Pfam PF07690 Major Facilitator Superfamily 34 401 5.9E-50 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_2817 1ed294472e7272fafe3a952394470cea 452 Gene3D G3DSA:1.20.1250.20 18 227 1.7E-58 T 17-10-2018 FORC55_2817 1ed294472e7272fafe3a952394470cea 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 3.9E-153 T 17-10-2018 FORC55_2817 1ed294472e7272fafe3a952394470cea 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 17-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 FORC55_2817 1ed294472e7272fafe3a952394470cea 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 3.1E-239 T 17-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 FORC55_2817 1ed294472e7272fafe3a952394470cea 452 PIRSF PIRSF002808 5 451 1.5E-171 T 17-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 FORC55_2817 1ed294472e7272fafe3a952394470cea 452 SUPERFAMILY SSF103473 16 440 6.93E-87 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 SMART SM00228 267 349 1.4E-16 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 SMART SM00228 374 447 2.3E-7 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 Gene3D G3DSA:2.40.10.120 37 261 1.5E-84 T 17-10-2018 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 7.3E-58 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 7.3E-58 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 7.3E-58 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 7.3E-58 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 7.3E-58 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 7.3E-58 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 3.0E-31 T 17-10-2018 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 SUPERFAMILY SSF50494 12 275 9.71E-65 T 17-10-2018 IPR009003 Peptidase S1, PA clan FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 SUPERFAMILY SSF50156 249 358 1.18E-24 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 Gene3D G3DSA:2.30.42.10 265 361 2.3E-28 T 17-10-2018 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 Pfam PF13180 PDZ domain 269 358 5.9E-18 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 Gene3D G3DSA:2.30.42.10 362 455 4.7E-27 T 17-10-2018 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 SUPERFAMILY SSF50156 382 454 4.21E-14 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 372 443 2.6E-10 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_2249 08a3ff38dbf108afa5bfb842205bbebc 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 8.4E-168 T 17-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 FORC55_0471 0957940ef2bf817cec3efea6d5c5827f 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 17-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0471 0957940ef2bf817cec3efea6d5c5827f 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.9E-130 T 17-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0471 0957940ef2bf817cec3efea6d5c5827f 398 Pfam PF01098 Cell cycle protein 26 381 3.8E-115 T 17-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0471 0957940ef2bf817cec3efea6d5c5827f 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 389 41.381 T 17-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_2176 75a43922776523ba1ff22f734efbf21e 89 Pfam PF00312 Ribosomal protein S15 8 88 7.5E-36 T 17-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2176 75a43922776523ba1ff22f734efbf21e 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 17-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2176 75a43922776523ba1ff22f734efbf21e 89 SMART SM01387 8 88 8.8E-51 T 17-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2176 75a43922776523ba1ff22f734efbf21e 89 SUPERFAMILY SSF47060 3 89 3.24E-34 T 17-10-2018 IPR009068 S15/NS1, RNA-binding FORC55_2176 75a43922776523ba1ff22f734efbf21e 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-40 T 17-10-2018 FORC55_2176 75a43922776523ba1ff22f734efbf21e 89 Gene3D G3DSA:1.10.287.10 2 89 6.5E-35 T 17-10-2018 FORC55_2176 75a43922776523ba1ff22f734efbf21e 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.395 T 17-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2176 75a43922776523ba1ff22f734efbf21e 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.5E-38 T 17-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_3587 682d06185a152d2d8f240a2d9fac4659 152 Gene3D G3DSA:1.10.10.10 12 152 5.3E-37 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3587 682d06185a152d2d8f240a2d9fac4659 152 Pfam PF01047 MarR family 46 103 5.1E-18 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3587 682d06185a152d2d8f240a2d9fac4659 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 2.2E-6 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3587 682d06185a152d2d8f240a2d9fac4659 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 2.2E-6 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3587 682d06185a152d2d8f240a2d9fac4659 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 2.2E-6 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3587 682d06185a152d2d8f240a2d9fac4659 152 SMART SM00347 39 137 8.6E-25 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3587 682d06185a152d2d8f240a2d9fac4659 152 SUPERFAMILY SSF46785 10 152 4.49E-37 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2561 c7caf99aa925825808944928a2192fbe 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.785 T 17-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 17-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 Gene3D G3DSA:3.20.190.10 2 128 1.6E-40 T 17-10-2018 IPR035937 MutM-like, N-terminal FORC55_2561 c7caf99aa925825808944928a2192fbe 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 6.6E-30 T 17-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 SUPERFAMILY SSF57716 217 268 1.79E-16 T 17-10-2018 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 6.0E-97 T 17-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 SUPERFAMILY SSF81624 2 138 3.79E-39 T 17-10-2018 IPR035937 MutM-like, N-terminal FORC55_2561 c7caf99aa925825808944928a2192fbe 269 SMART SM01232 129 221 1.3E-45 T 17-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 SMART SM00898 2 115 1.0E-50 T 17-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 Gene3D G3DSA:1.10.8.50 131 269 2.1E-47 T 17-10-2018 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 3.0E-28 T 17-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 SUPERFAMILY SSF46946 130 222 3.09E-30 T 17-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 FORC55_2561 c7caf99aa925825808944928a2192fbe 269 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 7.6E-7 T 17-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 FORC55_0453 b9b3aedfb20ef7719a7d9432ef480da9 296 SUPERFAMILY SSF54675 13 128 6.28E-32 T 17-10-2018 FORC55_0453 b9b3aedfb20ef7719a7d9432ef480da9 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.4E-58 T 17-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 FORC55_0453 b9b3aedfb20ef7719a7d9432ef480da9 296 Gene3D G3DSA:3.90.1170.20 20 293 7.2E-128 T 17-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 FORC55_0453 b9b3aedfb20ef7719a7d9432ef480da9 296 SUPERFAMILY SSF51690 130 294 1.73E-60 T 17-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 FORC55_0453 b9b3aedfb20ef7719a7d9432ef480da9 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 2.9E-25 T 17-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 FORC55_0453 b9b3aedfb20ef7719a7d9432ef480da9 296 Gene3D G3DSA:3.20.20.70 138 284 7.2E-128 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0453 b9b3aedfb20ef7719a7d9432ef480da9 296 PIRSF PIRSF006250 16 296 2.4E-99 T 17-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 FORC55_0453 b9b3aedfb20ef7719a7d9432ef480da9 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 28 294 3.2E-93 T 17-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 FORC55_3454 256e5547d18bed6483f6a744715759fa 437 Gene3D G3DSA:3.30.465.10 349 428 1.5E-28 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 FORC55_3454 256e5547d18bed6483f6a744715759fa 437 Pfam PF01595 Domain of unknown function DUF21 9 199 7.0E-41 T 17-10-2018 IPR002550 CNNM, transmembrane domain FORC55_3454 256e5547d18bed6483f6a744715759fa 437 SUPERFAMILY SSF54631 201 336 4.2E-18 T 17-10-2018 FORC55_3454 256e5547d18bed6483f6a744715759fa 437 SMART SM01091 348 428 7.3E-25 T 17-10-2018 IPR005170 Transporter-associated domain FORC55_3454 256e5547d18bed6483f6a744715759fa 437 Pfam PF03471 Transporter associated domain 350 427 5.6E-20 T 17-10-2018 IPR005170 Transporter-associated domain FORC55_3454 256e5547d18bed6483f6a744715759fa 437 Gene3D G3DSA:3.10.580.10 195 348 1.2E-26 T 17-10-2018 FORC55_3454 256e5547d18bed6483f6a744715759fa 437 SUPERFAMILY SSF56176 346 430 4.09E-21 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Gene3D G3DSA:3.90.199.10 33 520 1.6E-236 T 17-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 2.2E-7 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.6E-8 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 9.4E-13 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.8E-6 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.3 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 5.7E-11 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 813 5.9E-15 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.3E-158 T 17-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.716 T 17-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Gene3D G3DSA:1.10.268.10 369 492 1.6E-236 T 17-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 SMART SM00434 11 498 0.0 T 17-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Gene3D G3DSA:2.120.10.90 534 865 1.0E-123 T 17-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 863 0.0 T 17-10-2018 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 SUPERFAMILY SSF101904 532 873 1.7E-106 T 17-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 SUPERFAMILY SSF56719 30 520 2.22E-187 T 17-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 FORC55_1535 16d8e62770d67641ebec87f8b965bcc2 894 Gene3D G3DSA:3.30.1360.40 236 332 1.6E-236 T 17-10-2018 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 SUPERFAMILY SSF55666 451 550 2.24E-27 T 17-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 SUPERFAMILY SSF54791 555 623 2.05E-16 T 17-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.5E-21 T 17-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.2E-16 T 17-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Gene3D G3DSA:3.30.230.70 2 229 1.7E-76 T 17-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 SUPERFAMILY SSF54211 5 145 1.21E-48 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Gene3D G3DSA:3.30.230.70 234 550 3.0E-116 T 17-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-18 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 SMART SM00322 553 618 2.9E-11 T 17-10-2018 IPR004087 K Homology domain GO:0003676 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 17-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.2E-25 T 17-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Gene3D G3DSA:3.30.1370.10 551 622 7.1E-19 T 17-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 SUPERFAMILY SSF54211 292 489 2.83E-48 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 SUPERFAMILY SSF55666 146 236 8.69E-29 T 17-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 PIRSF PIRSF005499 2 708 5.6E-299 T 17-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Gene3D G3DSA:2.40.50.140 623 694 2.6E-29 T 17-10-2018 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 SUPERFAMILY SSF50249 608 693 3.43E-21 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.0E-14 T 17-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 SMART SM00316 621 691 1.8E-25 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.25 T 17-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 FORC55_2175 55f1b7688a352c15adaaca678d74b8b2 708 Pfam PF00013 KH domain 558 615 4.3E-9 T 17-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 Pfam PF03222 Tryptophan/tyrosine permease family 3 385 9.8E-111 T 17-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 Gene3D G3DSA:1.20.1740.10 3 398 3.0E-10 T 17-10-2018 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.1E-80 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 17-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site FORC55_3401 2fa4f3ea8fef45a247e7ce7b7f57baaa 400 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 376 4.4E-112 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.4E-16 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-16 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.4E-16 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 Gene3D G3DSA:2.30.170.50 1 83 1.5E-25 T 17-10-2018 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 9.7E-20 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 SUPERFAMILY SSF143800 1 80 3.1E-23 T 17-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 Pfam PF01197 Ribosomal protein L31 1 78 1.4E-27 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_1891 d4c98095f80aa392f75b8b583a44e473 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.723 T 17-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2685 40b8d979197047467d803b8c2f64867f 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.611 T 17-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 FORC55_2685 40b8d979197047467d803b8c2f64867f 107 SUPERFAMILY SSF54211 1 103 3.79E-28 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_2685 40b8d979197047467d803b8c2f64867f 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 102 8.6E-25 T 17-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 FORC55_2685 40b8d979197047467d803b8c2f64867f 107 Pfam PF00825 Ribonuclease P 1 101 7.9E-30 T 17-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 FORC55_2685 40b8d979197047467d803b8c2f64867f 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 94 4.0E-47 T 17-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 FORC55_2685 40b8d979197047467d803b8c2f64867f 107 Gene3D G3DSA:3.30.230.10 1 107 1.7E-36 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_2933 d21c597fa00c2e8f12a1af4afa525a09 246 SUPERFAMILY SSF52540 72 241 5.2E-20 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2933 d21c597fa00c2e8f12a1af4afa525a09 246 PIRSF PIRSF003073 1 246 1.3E-63 T 17-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein FORC55_2933 d21c597fa00c2e8f12a1af4afa525a09 246 Pfam PF01695 IstB-like ATP binding protein 54 229 4.0E-57 T 17-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 FORC55_2933 d21c597fa00c2e8f12a1af4afa525a09 246 Pfam PF08483 IstB-like ATP binding N-terminal 23 50 1.3E-9 T 17-10-2018 IPR013690 IstB-like ATP binding N-terminal FORC55_2933 d21c597fa00c2e8f12a1af4afa525a09 246 SMART SM00382 97 228 0.0012 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2933 d21c597fa00c2e8f12a1af4afa525a09 246 Gene3D G3DSA:3.40.50.300 60 243 8.5E-44 T 17-10-2018 FORC55_3107 d21c597fa00c2e8f12a1af4afa525a09 246 SUPERFAMILY SSF52540 72 241 5.2E-20 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3107 d21c597fa00c2e8f12a1af4afa525a09 246 PIRSF PIRSF003073 1 246 1.3E-63 T 17-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein FORC55_3107 d21c597fa00c2e8f12a1af4afa525a09 246 Pfam PF01695 IstB-like ATP binding protein 54 229 4.0E-57 T 17-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 FORC55_3107 d21c597fa00c2e8f12a1af4afa525a09 246 Pfam PF08483 IstB-like ATP binding N-terminal 23 50 1.3E-9 T 17-10-2018 IPR013690 IstB-like ATP binding N-terminal FORC55_3107 d21c597fa00c2e8f12a1af4afa525a09 246 SMART SM00382 97 228 0.0012 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3107 d21c597fa00c2e8f12a1af4afa525a09 246 Gene3D G3DSA:3.40.50.300 60 243 8.5E-44 T 17-10-2018 FORC55_1961 f9c7982b2fe1840db73424b3fba2db6d 420 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 47.443 T 17-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 FORC55_1961 f9c7982b2fe1840db73424b3fba2db6d 420 Gene3D G3DSA:3.50.50.60 95 404 2.3E-53 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1961 f9c7982b2fe1840db73424b3fba2db6d 420 Pfam PF01266 FAD dependent oxidoreductase 3 397 6.5E-71 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 FORC55_1961 f9c7982b2fe1840db73424b3fba2db6d 420 Gene3D G3DSA:3.30.9.10 134 362 2.3E-53 T 17-10-2018 FORC55_1961 f9c7982b2fe1840db73424b3fba2db6d 420 Gene3D G3DSA:3.50.50.60 1 81 1.4E-9 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1961 f9c7982b2fe1840db73424b3fba2db6d 420 SUPERFAMILY SSF54373 270 360 1.57E-16 T 17-10-2018 FORC55_1961 f9c7982b2fe1840db73424b3fba2db6d 420 SUPERFAMILY SSF51905 1 416 1.2E-52 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0784 d857db19481f8874cf070ff51f91b9cf 258 Pfam PF13614 AAA domain 4 180 2.3E-49 T 17-10-2018 IPR025669 AAA domain FORC55_0784 d857db19481f8874cf070ff51f91b9cf 258 SUPERFAMILY SSF52540 1 252 3.62E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0784 d857db19481f8874cf070ff51f91b9cf 258 PIRSF PIRSF009320 103 241 3.8E-7 T 17-10-2018 FORC55_0784 d857db19481f8874cf070ff51f91b9cf 258 PIRSF PIRSF009320 1 76 1.1E-13 T 17-10-2018 FORC55_0784 d857db19481f8874cf070ff51f91b9cf 258 Gene3D G3DSA:3.40.50.300 1 253 4.7E-67 T 17-10-2018 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 SUPERFAMILY SSF51735 1 268 4.22E-53 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 17-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 Gene3D G3DSA:3.40.50.720 3 264 5.9E-104 T 17-10-2018 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.9E-42 T 17-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 Gene3D G3DSA:3.30.360.10 127 234 5.9E-104 T 17-10-2018 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 PIRSF PIRSF000161 1 268 9.6E-91 T 17-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.4E-43 T 17-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 SUPERFAMILY SSF55347 127 236 1.81E-37 T 17-10-2018 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.903 T 17-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_0481 1439dc5df8f5b777df5e16bbcc525048 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 8.2E-102 T 17-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 SUPERFAMILY SSF47384 321 384 2.47E-13 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 571 2.3E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Gene3D G3DSA:3.30.565.10 384 571 1.8E-59 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 321 383 1.3E-16 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Pfam PF01584 CheW-like domain 579 705 1.6E-24 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Pfam PF01627 Hpt domain 7 103 1.0E-17 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Gene3D G3DSA:1.10.287.560 320 383 1.9E-17 T 17-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 SMART SM01231 320 383 1.9E-19 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Gene3D G3DSA:2.40.50.180 595 658 4.4E-37 T 17-10-2018 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 SUPERFAMILY SSF50341 571 703 7.06E-30 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 SUPERFAMILY SSF47226 4 129 2.49E-29 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 SMART SM00260 564 703 7.9E-39 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 SMART SM00387 428 572 2.0E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 SMART SM00073 5 102 5.9E-25 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Gene3D G3DSA:1.20.120.160 1 146 1.1E-36 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 SUPERFAMILY SSF55874 387 570 7.99E-41 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 5.5E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 569 5.5E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 526 5.5E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 550 5.5E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3670 f17979c43e1d83f593c47a9c3961f053 720 Gene3D G3DSA:2.30.30.40 572 699 4.4E-37 T 17-10-2018 FORC55_2815 98aec525bc09f8aa388d9bf1d0602293 226 Gene3D G3DSA:1.10.10.10 178 224 3.9E-5 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2815 98aec525bc09f8aa388d9bf1d0602293 226 Gene3D G3DSA:2.60.120.10 17 153 4.3E-16 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_2815 98aec525bc09f8aa388d9bf1d0602293 226 SUPERFAMILY SSF51206 30 142 1.96E-20 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_2815 98aec525bc09f8aa388d9bf1d0602293 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 3.3E-14 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_2815 98aec525bc09f8aa388d9bf1d0602293 226 SMART SM00100 14 137 8.5E-5 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_0974 5d677fbc53e72f153dc86af3abd24f16 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 252 1.2E-62 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_0974 5d677fbc53e72f153dc86af3abd24f16 258 Gene3D G3DSA:3.40.190.10 112 210 1.3E-74 T 17-10-2018 FORC55_0974 5d677fbc53e72f153dc86af3abd24f16 258 SMART SM00062 26 254 9.3E-69 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_0974 5d677fbc53e72f153dc86af3abd24f16 258 SMART SM00079 26 253 2.9E-4 T 17-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 FORC55_0974 5d677fbc53e72f153dc86af3abd24f16 258 Gene3D G3DSA:3.40.190.10 30 251 1.3E-74 T 17-10-2018 FORC55_0974 5d677fbc53e72f153dc86af3abd24f16 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 17-10-2018 IPR018313 Solute-binding protein family 3, conserved site FORC55_0974 5d677fbc53e72f153dc86af3abd24f16 258 SUPERFAMILY SSF53850 1 255 3.67E-70 T 17-10-2018 FORC55_0974 5d677fbc53e72f153dc86af3abd24f16 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 251 6.7E-86 T 17-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.8E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 Gene3D G3DSA:3.40.190.10 91 286 7.0E-27 T 17-10-2018 FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 Gene3D G3DSA:1.10.10.10 1 90 4.3E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 Gene3D G3DSA:3.40.190.10 165 265 7.0E-27 T 17-10-2018 FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 SUPERFAMILY SSF46785 2 87 3.3E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 Pfam PF03466 LysR substrate binding domain 86 290 2.3E-34 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2635 bab356f93d8551a3c531f995e4497d4d 298 SUPERFAMILY SSF53850 87 291 6.4E-29 T 17-10-2018 FORC55_2467 115070602bd83c9c4fc9dcab3d2ce047 140 SUPERFAMILY SSF55729 3 112 3.6E-11 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2467 115070602bd83c9c4fc9dcab3d2ce047 140 Gene3D G3DSA:3.40.630.30 12 130 2.6E-10 T 17-10-2018 FORC55_2467 115070602bd83c9c4fc9dcab3d2ce047 140 Pfam PF13508 Acetyltransferase (GNAT) domain 31 106 5.0E-9 T 17-10-2018 IPR000182 GNAT domain FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 SUPERFAMILY SSF81296 139 194 1.68E-6 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 629 726 6.4E-17 T 17-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 SUPERFAMILY SSF51011 624 726 4.86E-27 T 17-10-2018 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 116 723 2.0E-244 T 17-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 Pfam PF00128 Alpha amylase, catalytic domain 276 348 3.3E-6 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 SUPERFAMILY SSF81296 22 103 5.6E-11 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 PIRSF PIRSF000463 10 729 6.0E-277 T 17-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 SMART SM00642 251 618 3.8E-7 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 SUPERFAMILY SSF51445 180 617 3.1E-109 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 Gene3D G3DSA:2.60.40.10 7 221 1.0E-51 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 92 727 41.042 T 17-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 132 208 1.3E-19 T 17-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 Gene3D G3DSA:3.20.20.80 225 623 5.7E-162 T 17-10-2018 FORC55_2703 5e062a2c9d968c428f6e96663863bb4a 729 Gene3D G3DSA:2.60.40.1180 624 728 6.1E-29 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta FORC55_0214 c70c0dba33677f0be2423c21c936079c 185 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.1E-86 T 17-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 FORC55_0214 c70c0dba33677f0be2423c21c936079c 185 Gene3D G3DSA:3.60.20.10 1 173 2.9E-67 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_0214 c70c0dba33677f0be2423c21c936079c 185 Pfam PF00227 Proteasome subunit 2 169 9.9E-23 T 17-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 FORC55_0214 c70c0dba33677f0be2423c21c936079c 185 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.719 T 17-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 FORC55_0214 c70c0dba33677f0be2423c21c936079c 185 PIRSF PIRSF039093 1 175 2.3E-86 T 17-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 FORC55_0214 c70c0dba33677f0be2423c21c936079c 185 SUPERFAMILY SSF56235 2 172 1.14E-56 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 SUPERFAMILY SSF47384 468 545 4.32E-20 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Gene3D G3DSA:3.30.450.20 344 465 2.3E-8 T 17-10-2018 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 645 1.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 659 1.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 684 1.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 703 1.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 9 360 0.0 T 17-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Gene3D G3DSA:3.30.450.220 52 207 2.7E-64 T 17-10-2018 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Pfam PF00512 His Kinase A (phospho-acceptor) domain 480 544 1.2E-19 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 SMART SM00448 730 842 8.0E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 SUPERFAMILY SSF52172 729 849 3.7E-29 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Pfam PF00072 Response regulator receiver domain 732 842 5.6E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 SMART SM00387 591 706 4.1E-35 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Gene3D G3DSA:1.10.287.130 466 544 3.1E-23 T 17-10-2018 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Gene3D G3DSA:2.20.20.100 208 271 4.9E-46 T 17-10-2018 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 704 7.5E-29 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Gene3D G3DSA:3.40.50.2300 722 853 1.8E-29 T 17-10-2018 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Gene3D G3DSA:3.30.565.10 545 710 3.6E-46 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 SMART SM00388 479 544 3.6E-23 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 SUPERFAMILY SSF103190 52 269 9.42E-62 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 Pfam PF09308 LuxQ, periplasmic 41 277 4.1E-97 T 17-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 FORC55_3368 24b80a3b23d18fd1a3fe71b54786fdd9 857 SUPERFAMILY SSF55874 533 708 9.69E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0466 4de9d3534f8e9de063b0d89b2d37e7a2 580 Pfam PF03717 Penicillin-binding Protein dimerisation domain 74 227 4.0E-17 T 17-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 FORC55_0466 4de9d3534f8e9de063b0d89b2d37e7a2 580 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 562 2.9E-77 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 FORC55_0466 4de9d3534f8e9de063b0d89b2d37e7a2 580 Gene3D G3DSA:3.90.1310.30 65 240 1.5E-42 T 17-10-2018 FORC55_0466 4de9d3534f8e9de063b0d89b2d37e7a2 580 SUPERFAMILY SSF56519 69 240 1.44E-41 T 17-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 FORC55_0466 4de9d3534f8e9de063b0d89b2d37e7a2 580 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 25 577 44.102 T 17-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_0466 4de9d3534f8e9de063b0d89b2d37e7a2 580 SUPERFAMILY SSF56601 241 570 1.19E-90 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_0466 4de9d3534f8e9de063b0d89b2d37e7a2 580 Gene3D G3DSA:3.30.450.330 242 566 5.8E-106 T 17-10-2018 FORC55_0466 4de9d3534f8e9de063b0d89b2d37e7a2 580 Gene3D G3DSA:3.40.710.10 302 484 5.8E-106 T 17-10-2018 FORC55_2699 ccc612eff182d5b1e8b2ad7e5b663d24 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 9.2E-28 T 17-10-2018 IPR021230 Protein of unknown function DUF2810 FORC55_2699 ccc612eff182d5b1e8b2ad7e5b663d24 118 Gene3D G3DSA:3.30.1370.150 58 118 4.7E-29 T 17-10-2018 FORC55_3521 289e93b5fa6254a90f4fda053232c994 70 SUPERFAMILY SSF50249 2 69 5.57E-26 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3521 289e93b5fa6254a90f4fda053232c994 70 SMART SM00357 6 70 7.1E-32 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_3521 289e93b5fa6254a90f4fda053232c994 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.7E-29 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_3521 289e93b5fa6254a90f4fda053232c994 70 PIRSF PIRSF002599 1 70 1.0E-24 T 17-10-2018 IPR012156 Cold shock, CspA GO:0003676 FORC55_3521 289e93b5fa6254a90f4fda053232c994 70 PRINTS PR00050 Cold shock protein signature 28 37 3.1E-16 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_3521 289e93b5fa6254a90f4fda053232c994 70 PRINTS PR00050 Cold shock protein signature 43 61 3.1E-16 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_3521 289e93b5fa6254a90f4fda053232c994 70 PRINTS PR00050 Cold shock protein signature 7 22 3.1E-16 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_3521 289e93b5fa6254a90f4fda053232c994 70 Gene3D G3DSA:2.40.50.140 2 69 2.9E-29 T 17-10-2018 FORC55_0557 30aa87651b2a6e0d3c2bbf5b698b4422 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.1E-30 T 17-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain FORC55_0557 30aa87651b2a6e0d3c2bbf5b698b4422 296 SUPERFAMILY SSF51735 1 165 5.77E-51 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0557 30aa87651b2a6e0d3c2bbf5b698b4422 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 2.5E-94 T 17-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 FORC55_0557 30aa87651b2a6e0d3c2bbf5b698b4422 296 SUPERFAMILY SSF48179 168 290 2.65E-38 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_0557 30aa87651b2a6e0d3c2bbf5b698b4422 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 290 2.4E-38 T 17-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain FORC55_0557 30aa87651b2a6e0d3c2bbf5b698b4422 296 Gene3D G3DSA:3.40.50.720 1 166 8.0E-53 T 17-10-2018 FORC55_0557 30aa87651b2a6e0d3c2bbf5b698b4422 296 Gene3D G3DSA:1.10.1040.10 167 296 1.9E-44 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 SUPERFAMILY SSF53623 108 323 3.92E-73 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 SUPERFAMILY SSF51984 23 109 2.88E-28 T 17-10-2018 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 2.8E-21 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 Gene3D G3DSA:3.40.1190.10 111 324 5.1E-86 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 Pfam PF08245 Mur ligase middle domain 127 307 5.8E-30 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 SUPERFAMILY SSF53244 326 474 6.78E-48 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 Gene3D G3DSA:3.90.190.20 325 482 1.4E-48 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 Gene3D G3DSA:3.40.50.720 23 110 7.3E-34 T 17-10-2018 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.2E-191 T 17-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.724 T 17-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_0473 f56072ee7baa424da40b9045325c66a2 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 2.3E-29 T 17-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 Gene3D G3DSA:3.40.50.720 93 258 3.1E-118 T 17-10-2018 FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 17-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 Gene3D G3DSA:3.40.50.720 1 279 3.1E-118 T 17-10-2018 FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 Gene3D G3DSA:3.30.1370.170 294 381 3.6E-39 T 17-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 SUPERFAMILY SSF52283 3 132 1.32E-22 T 17-10-2018 FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 3.0E-36 T 17-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 SUPERFAMILY SSF51735 93 258 8.42E-38 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 287 2.1E-23 T 17-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 9.6E-28 T 17-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 FORC55_0741 29b8a4f12ff3fae1b6cec6aca638ec92 381 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 46.207 T 17-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 1.3E-96 T 17-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 Pfam PF05175 Methyltransferase small domain 134 217 2.6E-18 T 17-10-2018 IPR007848 Methyltransferase small domain GO:0008168 FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 PIRSF PIRSF037167 2 307 1.5E-149 T 17-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 Gene3D G3DSA:1.10.8.10 16 102 5.4E-6 T 17-10-2018 FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 8.7E-138 T 17-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 SUPERFAMILY SSF53335 16 293 2.81E-50 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 Gene3D G3DSA:3.40.50.150 103 281 6.1E-47 T 17-10-2018 FORC55_0733 851e4bb367b40b873bb07f8c0992141e 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.529 T 17-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 17-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.3E-27 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 SUPERFAMILY SSF55594 1 82 3.01E-26 T 17-10-2018 IPR035895 HPr-like superfamily FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.0E-28 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 Gene3D G3DSA:3.30.1340.10 1 85 2.5E-32 T 17-10-2018 IPR035895 HPr-like superfamily FORC55_1808 cceb840ef05a8b4ddaea4cc3d6c6e170 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 17-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site FORC55_3593 7d0b020c82070fff9a7a78f9e69649ae 243 Pfam PF07670 Nucleoside recognition 85 179 4.0E-11 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 17-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Pfam PF00171 Aldehyde dehydrogenase family 5 402 5.1E-25 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:1.20.1090.10 643 864 3.2E-60 T 17-10-2018 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:3.40.309.10 217 400 4.9E-169 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 SUPERFAMILY SSF56796 452 863 6.28E-115 T 17-10-2018 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 17-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:3.40.605.10 401 455 1.7E-7 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 850 3.2E-113 T 17-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:3.40.605.10 15 216 4.9E-169 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 SUPERFAMILY SSF53720 6 454 2.23E-84 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 PIRSF PIRSF000111 1 865 0.0 T 17-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 FORC55_0811 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:3.40.50.1970 456 642 2.9E-58 T 17-10-2018 FORC55_2974 87be7444d1a2ca4ddb7c0a406345af1d 459 Pfam PF02321 Outer membrane efflux protein 258 436 1.1E-16 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_2974 87be7444d1a2ca4ddb7c0a406345af1d 459 Pfam PF02321 Outer membrane efflux protein 42 221 2.1E-8 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_2974 87be7444d1a2ca4ddb7c0a406345af1d 459 Gene3D G3DSA:1.20.1600.10 33 438 6.6E-44 T 17-10-2018 FORC55_2974 87be7444d1a2ca4ddb7c0a406345af1d 459 SUPERFAMILY SSF56954 3 438 2.22E-53 T 17-10-2018 FORC55_3241 c0506e1077506390aa3425b9b841d56f 270 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 270 139.899 T 17-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 FORC55_3241 c0506e1077506390aa3425b9b841d56f 270 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 36 204 2.4E-16 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3241 c0506e1077506390aa3425b9b841d56f 270 SUPERFAMILY SSF56784 5 259 7.35E-55 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_3241 c0506e1077506390aa3425b9b841d56f 270 Gene3D G3DSA:1.10.150.240 23 101 1.6E-98 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 FORC55_3241 c0506e1077506390aa3425b9b841d56f 270 Gene3D G3DSA:3.40.50.1000 7 270 1.6E-98 T 17-10-2018 IPR023214 HAD superfamily FORC55_3241 c0506e1077506390aa3425b9b841d56f 270 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 5 258 1.2E-113 T 17-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 FORC55_3241 c0506e1077506390aa3425b9b841d56f 270 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 204 4.2E-9 T 17-10-2018 FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 SUPERFAMILY SSF56784 1 212 1.01E-52 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 Gene3D G3DSA:3.40.50.1000 5 186 7.6E-52 T 17-10-2018 IPR023214 HAD superfamily FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 182 1.1E-17 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 3.0E-9 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.0E-9 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.0E-9 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.0E-9 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 1.2E-34 T 17-10-2018 FORC55_2777 3ed2e0b25cf19b9803022fff5075f350 216 Gene3D G3DSA:1.10.150.240 17 80 7.6E-52 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 FORC55_2302 2ebad26284d0d5ebb2a53ccbf9631c80 234 Pfam PF00455 DeoR C terminal sensor domain 56 211 3.7E-45 T 17-10-2018 IPR014036 DeoR C-terminal sensor domain FORC55_2302 2ebad26284d0d5ebb2a53ccbf9631c80 234 SMART SM01134 51 212 1.5E-58 T 17-10-2018 FORC55_2302 2ebad26284d0d5ebb2a53ccbf9631c80 234 Pfam PF08220 DeoR-like helix-turn-helix domain 1 39 2.2E-10 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_2302 2ebad26284d0d5ebb2a53ccbf9631c80 234 SMART SM00420 1 39 0.0025 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_2302 2ebad26284d0d5ebb2a53ccbf9631c80 234 SUPERFAMILY SSF100950 57 212 1.84E-31 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_2302 2ebad26284d0d5ebb2a53ccbf9631c80 234 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 5 19 7.4E-5 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_2302 2ebad26284d0d5ebb2a53ccbf9631c80 234 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 19 37 7.4E-5 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_2302 2ebad26284d0d5ebb2a53ccbf9631c80 234 SUPERFAMILY SSF46785 1 44 3.43E-8 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 Gene3D G3DSA:1.10.287.470 135 200 3.9E-10 T 17-10-2018 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 SUPERFAMILY SSF111369 136 196 5.49E-6 T 17-10-2018 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 Gene3D G3DSA:2.40.30.170 259 380 4.8E-32 T 17-10-2018 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 Gene3D G3DSA:1.10.287.470 94 118 1.8E-11 T 17-10-2018 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 Pfam PF13533 Biotin-lipoyl like 62 108 1.1E-10 T 17-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 256 277 2.6E-6 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 71 91 2.6E-6 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 377 2.6E-6 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 SUPERFAMILY SSF111369 55 115 6.67E-10 T 17-10-2018 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 Gene3D G3DSA:2.40.50.100 59 93 1.8E-11 T 17-10-2018 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 SUPERFAMILY SSF111369 191 294 7.06E-12 T 17-10-2018 FORC55_1399 d2fef3ea8d2debf69929c6171e04cc75 395 Pfam PF13437 HlyD family secretion protein 244 324 3.4E-15 T 17-10-2018 FORC55_0615 e4c3d668cdc81579a67a84617456f4e2 206 Gene3D G3DSA:3.30.420.10 11 205 1.3E-76 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_0615 e4c3d668cdc81579a67a84617456f4e2 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.697 T 17-10-2018 IPR022898 Ribonuclease HII GO:0004523 FORC55_0615 e4c3d668cdc81579a67a84617456f4e2 206 Pfam PF01351 Ribonuclease HII 22 196 2.9E-38 T 17-10-2018 IPR024567 Ribonuclease HII/HIII domain FORC55_0615 e4c3d668cdc81579a67a84617456f4e2 206 SUPERFAMILY SSF53098 15 204 2.28E-69 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_3270 0ce66d1ccf45d8cade0e13455bf467c8 292 SUPERFAMILY SSF56935 30 287 3.94E-18 T 17-10-2018 FORC55_3270 0ce66d1ccf45d8cade0e13455bf467c8 292 Gene3D G3DSA:2.40.170.20 195 291 1.0E-13 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_3270 0ce66d1ccf45d8cade0e13455bf467c8 292 Gene3D G3DSA:2.170.130.10 32 162 1.1E-28 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily FORC55_3270 0ce66d1ccf45d8cade0e13455bf467c8 292 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 147 4.8E-8 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Hamap MF_01687 Beta-galactosidase [lacZ]. 22 1039 16.723 T 17-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 SUPERFAMILY SSF51445 352 642 7.41E-103 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Gene3D G3DSA:2.60.40.10 237 351 1.1E-22 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_0533 203958b992cff015d026c5a445dadc48 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 465 480 2.0E-36 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 549 564 2.0E-36 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 393 411 2.0E-36 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 362 376 2.0E-36 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 163 178 2.0E-36 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 SUPERFAMILY SSF74650 751 1037 1.02E-96 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Pfam PF16353 Domain of unknown function(DUF4981) 654 739 3.2E-13 T 17-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Gene3D G3DSA:3.20.20.80 352 642 1.8E-123 T 17-10-2018 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 68 235 1.1E-56 T 17-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Gene3D G3DSA:2.60.120.260 27 235 3.6E-83 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Gene3D G3DSA:2.70.98.10 749 1039 5.1E-97 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 353 646 1.7E-110 T 17-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 SUPERFAMILY SSF49785 29 235 3.26E-65 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Pfam PF02929 Beta galactosidase small chain 768 1036 1.2E-70 T 17-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Pfam PF00703 Glycosyl hydrolases family 2 238 351 7.5E-14 T 17-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 SUPERFAMILY SSF49303 238 351 2.88E-21 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily FORC55_0533 203958b992cff015d026c5a445dadc48 1049 SMART SM01038 764 1037 3.6E-120 T 17-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 403 428 - T 17-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 465 479 - T 17-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 FORC55_0533 203958b992cff015d026c5a445dadc48 1049 SUPERFAMILY SSF49303 639 741 9.35E-22 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily FORC55_0533 203958b992cff015d026c5a445dadc48 1049 Gene3D G3DSA:2.60.40.10 643 742 3.1E-15 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2737 13272ad4797cea9cd2a7df5b161a99f5 317 PIRSF PIRSF037004 1 317 3.8E-140 T 17-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 FORC55_2737 13272ad4797cea9cd2a7df5b161a99f5 317 Pfam PF04463 Protein of unknown function (DUF523) 8 149 6.9E-39 T 17-10-2018 IPR007553 Domain of unknown function DUF523 FORC55_2737 13272ad4797cea9cd2a7df5b161a99f5 317 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 7.0E-45 T 17-10-2018 IPR013560 Domain of unknown function DUF1722 FORC55_3395 0084f96db1491d9a68e2c99975f7563b 171 Pfam PF00293 NUDIX domain 33 146 2.1E-18 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_3395 0084f96db1491d9a68e2c99975f7563b 171 Gene3D G3DSA:3.90.79.10 1 167 3.7E-48 T 17-10-2018 FORC55_3395 0084f96db1491d9a68e2c99975f7563b 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 FORC55_3395 0084f96db1491d9a68e2c99975f7563b 171 SUPERFAMILY SSF55811 2 168 1.22E-44 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_3220 2568940ab9eb2331091c62617a307b33 203 Gene3D G3DSA:3.40.30.10 4 201 4.8E-55 T 17-10-2018 FORC55_3220 2568940ab9eb2331091c62617a307b33 203 SUPERFAMILY SSF52833 1 86 9.84E-21 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_3220 2568940ab9eb2331091c62617a307b33 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 129 194 3.1E-10 T 17-10-2018 FORC55_3220 2568940ab9eb2331091c62617a307b33 203 SUPERFAMILY SSF47616 81 203 1.53E-25 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily FORC55_3220 2568940ab9eb2331091c62617a307b33 203 Gene3D G3DSA:1.20.1050.10 83 199 4.8E-55 T 17-10-2018 FORC55_3220 2568940ab9eb2331091c62617a307b33 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 2.3E-15 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.30.30.30 1 65 5.0E-13 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 4.5E-14 T 17-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 2.5E-103 T 17-10-2018 IPR011897 Translation elongation factor P-like, YeiP FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50249 132 188 4.63E-15 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 1.9E-15 T 17-10-2018 IPR013185 Translation elongation factor, KOW-like FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.40.50.140 67 130 1.3E-15 T 17-10-2018 FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 4.7E-19 T 17-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50104 1 65 2.35E-10 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50249 67 129 3.13E-12 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 SMART SM00841 132 187 4.0E-26 T 17-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.40.50.140 131 188 9.9E-20 T 17-10-2018 FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 SMART SM01185 69 124 1.1E-15 T 17-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 PIRSF PIRSF005901 1 188 1.9E-60 T 17-10-2018 IPR020599 Translation elongation factor P/YeiP FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 41.862 T 17-10-2018 IPR011897 Translation elongation factor P-like, YeiP FORC55_1575 bd83ffb5ea769c6ebad18209b1f97646 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 17-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 SUPERFAMILY SSF52440 1 88 1.44E-16 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 Gene3D G3DSA:3.40.50.20 1 78 2.0E-19 T 17-10-2018 FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 Gene3D G3DSA:3.30.470.20 178 369 6.3E-70 T 17-10-2018 FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 Gene3D G3DSA:3.30.1490.20 92 177 5.5E-22 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 Pfam PF02222 ATP-grasp domain 101 274 9.3E-51 T 17-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 350 8.7E-106 T 17-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.777 T 17-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 SUPERFAMILY SSF51246 299 373 5.73E-19 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 FORC55_0038 b63f5d1aafeb99d0edb0a264464a43b2 377 SUPERFAMILY SSF56059 92 295 1.66E-55 T 17-10-2018 FORC55_3372 6be526b18c4401f5fc06d9f6fad3e6fb 215 SUPERFAMILY SSF46785 2 84 3.9E-31 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3372 6be526b18c4401f5fc06d9f6fad3e6fb 215 Gene3D G3DSA:1.10.10.10 95 175 1.3E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3372 6be526b18c4401f5fc06d9f6fad3e6fb 215 Gene3D G3DSA:1.10.10.10 1 89 2.1E-35 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3372 6be526b18c4401f5fc06d9f6fad3e6fb 215 SUPERFAMILY SSF46785 90 173 2.02E-29 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3372 6be526b18c4401f5fc06d9f6fad3e6fb 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 9.0E-64 T 17-10-2018 IPR007432 Protein of unknown function DUF480 FORC55_3372 6be526b18c4401f5fc06d9f6fad3e6fb 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 215 34.807 T 17-10-2018 IPR007432 Protein of unknown function DUF480 FORC55_2445 a123c78ee977913088217afeb39e3266 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 281 3.9E-62 T 17-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 FORC55_2445 a123c78ee977913088217afeb39e3266 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.74 T 17-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 FORC55_2445 a123c78ee977913088217afeb39e3266 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 4.3E-89 T 17-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 FORC55_0323 3d42f4f6ee618943e02ac3c921f27baf 288 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 39 53 - T 17-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 FORC55_0323 3d42f4f6ee618943e02ac3c921f27baf 288 Gene3D G3DSA:3.40.1010.10 32 149 2.9E-44 T 17-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 FORC55_0323 3d42f4f6ee618943e02ac3c921f27baf 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 36 245 2.8E-47 T 17-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 FORC55_0323 3d42f4f6ee618943e02ac3c921f27baf 288 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 34 267 9.2E-93 T 17-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 FORC55_0323 3d42f4f6ee618943e02ac3c921f27baf 288 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 114 147 - T 17-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 FORC55_0323 3d42f4f6ee618943e02ac3c921f27baf 288 Gene3D G3DSA:3.30.950.10 150 287 6.4E-46 T 17-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 FORC55_0323 3d42f4f6ee618943e02ac3c921f27baf 288 SUPERFAMILY SSF53790 31 277 1.44E-79 T 17-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 Gene3D G3DSA:1.10.520.10 21 432 3.3E-220 T 17-10-2018 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 17-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 SUPERFAMILY SSF48113 19 430 6.78E-155 T 17-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 7.8E-19 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 7.8E-19 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 7.8E-19 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 7.8E-19 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 7.8E-19 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 Gene3D G3DSA:1.10.520.10 433 723 8.5E-154 T 17-10-2018 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 Gene3D G3DSA:1.10.420.10 578 699 8.5E-154 T 17-10-2018 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 Gene3D G3DSA:1.10.420.20 191 399 3.3E-220 T 17-10-2018 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 SUPERFAMILY SSF48113 432 723 5.8E-115 T 17-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 Pfam PF00141 Peroxidase 406 698 6.1E-36 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 Pfam PF00141 Peroxidase 70 397 9.0E-51 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.614 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 724 0.0 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 6.0E-54 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 6.0E-54 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 6.0E-54 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 6.0E-54 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 FORC55_1268 cea801156133e21b4f6e25a515d68244 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 6.0E-54 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 FORC55_0112 b3df2537a64f3f32918ac88c92fe6507 205 PIRSF PIRSF006324 1 205 8.1E-57 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_0112 b3df2537a64f3f32918ac88c92fe6507 205 Pfam PF01810 LysE type translocator 15 202 8.7E-34 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 Hamap MF_00505 Chaperone protein HtpG [htpG]. 20 645 32.426 T 17-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 PIRSF PIRSF002583 3 648 1.2E-217 T 17-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 Gene3D G3DSA:1.20.120.790 513 645 7.8E-41 T 17-10-2018 IPR037196 HSP90, C-terminal domain FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 Pfam PF00183 Hsp90 protein 240 645 1.7E-128 T 17-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 Gene3D G3DSA:3.30.230.80 250 417 1.1E-69 T 17-10-2018 FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 PRINTS PR00775 90kDa heat shock protein signature 208 226 7.0E-64 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 PRINTS PR00775 90kDa heat shock protein signature 23 43 7.0E-64 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 PRINTS PR00775 90kDa heat shock protein signature 93 110 7.0E-64 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 PRINTS PR00775 90kDa heat shock protein signature 111 128 7.0E-64 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 PRINTS PR00775 90kDa heat shock protein signature 138 160 7.0E-64 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 PRINTS PR00775 90kDa heat shock protein signature 190 207 7.0E-64 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 PRINTS PR00775 90kDa heat shock protein signature 44 66 7.0E-64 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 43 52 - T 17-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 SMART SM00387 45 202 9.0E-7 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 Gene3D G3DSA:3.30.565.10 19 232 1.9E-77 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 SUPERFAMILY SSF55874 23 232 4.98E-66 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 Gene3D G3DSA:3.40.50.11260 418 507 4.7E-35 T 17-10-2018 FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 SUPERFAMILY SSF110942 533 644 3.14E-33 T 17-10-2018 IPR037196 HSP90, C-terminal domain FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 SUPERFAMILY SSF54211 251 506 7.36E-99 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_1791 6bbae4ad87a32fe372e4cfeae987b73f 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 45 201 3.9E-13 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF14492 Elongation Factor G, domain II 409 483 8.5E-34 T 17-10-2018 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 4.6E-35 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF50447 271 409 2.83E-34 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF03764 Elongation factor G, domain IV 484 603 8.5E-48 T 17-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:2.40.30.10 299 405 1.1E-45 T 17-10-2018 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 17-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 SMART SM00838 605 693 1.1E-58 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.4E-16 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF00679 Elongation factor G C-terminus 605 692 2.0E-31 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:3.30.230.10 489 693 2.5E-90 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF54211 484 604 1.8E-46 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 SMART SM00889 485 603 1.2E-73 T 17-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:3.30.70.240 609 680 2.5E-90 T 17-10-2018 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF54980 407 485 3.24E-25 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF52540 6 288 4.71E-106 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:3.40.50.300 1 298 7.1E-116 T 17-10-2018 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.2E-66 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF54980 608 695 4.08E-30 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.573 T 17-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:3.30.70.870 410 488 1.0E-32 T 17-10-2018 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2423 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_1871 6af2c488615d0eac7ac97f9535eb8291 452 Gene3D G3DSA:3.40.50.450 121 450 2.3E-129 T 17-10-2018 FORC55_1871 6af2c488615d0eac7ac97f9535eb8291 452 Pfam PF03641 Possible lysine decarboxylase 187 326 1.6E-37 T 17-10-2018 IPR031100 LOG family FORC55_1871 6af2c488615d0eac7ac97f9535eb8291 452 Gene3D G3DSA:3.30.1850.10 1 120 1.4E-58 T 17-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 FORC55_1871 6af2c488615d0eac7ac97f9535eb8291 452 Pfam PF11892 Domain of unknown function (DUF3412) 330 451 1.5E-57 T 17-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 FORC55_1871 6af2c488615d0eac7ac97f9535eb8291 452 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 2.2E-51 T 17-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 FORC55_1871 6af2c488615d0eac7ac97f9535eb8291 452 SUPERFAMILY SSF102405 119 326 1.53E-41 T 17-10-2018 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 SUPERFAMILY SSF46689 359 457 6.57E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 Gene3D G3DSA:1.10.8.60 318 397 4.0E-22 T 17-10-2018 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 SUPERFAMILY SSF52172 12 190 2.7E-41 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 Pfam PF00072 Response regulator receiver domain 13 122 1.2E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 Gene3D G3DSA:3.40.50.2300 2 144 1.3E-33 T 17-10-2018 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 SMART SM00448 11 122 2.2E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 Pfam PF02954 Bacterial regulatory protein, Fis family 418 456 1.1E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 SMART SM00382 166 309 2.0E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 Gene3D G3DSA:1.10.10.60 412 456 7.8E-10 T 17-10-2018 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 SUPERFAMILY SSF52540 146 389 7.92E-69 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 Pfam PF00158 Sigma-54 interaction domain 147 312 7.0E-69 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_1759 ac70fdc6e8318a9e535bb41c8f71d497 469 Gene3D G3DSA:3.40.50.300 145 317 1.3E-63 T 17-10-2018 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 17-10-2018 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 SMART SM00662 23 235 4.9E-104 T 17-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.977 T 17-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 2.6E-24 T 17-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 17-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:2.170.120.12 53 178 1.2E-83 T 17-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 17-10-2018 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF56553 53 179 5.06E-41 T 17-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 4.0E-112 T 17-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 17-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:3.30.1360.10 17 229 1.2E-83 T 17-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF55257 7 234 3.93E-30 T 17-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0313 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 17-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 5.3E-190 T 17-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 Gene3D G3DSA:3.90.226.10 315 539 1.4E-161 T 17-10-2018 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 1.4E-53 T 17-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 Gene3D G3DSA:3.90.226.10 94 314 1.4E-161 T 17-10-2018 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 Gene3D G3DSA:3.40.1750.10 186 497 1.4E-161 T 17-10-2018 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 SUPERFAMILY SSF52096 40 284 2.09E-27 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 Pfam PF01343 Peptidase family S49 138 294 4.8E-31 T 17-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 Pfam PF01343 Peptidase family S49 391 541 7.2E-46 T 17-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 PIRSF PIRSF001217 8 616 9.6E-223 T 17-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 FORC55_0847 cf5f62026278d32c94fcc031d0251a36 616 SUPERFAMILY SSF52096 324 529 4.11E-43 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_0937 f009988667f002e6edee66c68787ef78 383 Gene3D G3DSA:1.10.10.680 169 250 8.0E-79 T 17-10-2018 FORC55_0937 f009988667f002e6edee66c68787ef78 383 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 3.1E-164 T 17-10-2018 IPR015093 Protein of unknown function DUF1887 FORC55_0937 f009988667f002e6edee66c68787ef78 383 SUPERFAMILY SSF52980 1 382 2.86E-121 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_0937 f009988667f002e6edee66c68787ef78 383 Gene3D G3DSA:3.40.50.10770 1 140 1.1E-63 T 17-10-2018 FORC55_0937 f009988667f002e6edee66c68787ef78 383 Gene3D G3DSA:3.40.1350.10 251 376 8.0E-79 T 17-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 FORC55_0039 8b2d92a80d98c9534c6e0f8e0945053c 161 PIRSF PIRSF001338 1 161 2.3E-68 T 17-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 FORC55_0039 8b2d92a80d98c9534c6e0f8e0945053c 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 4.1E-68 T 17-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 FORC55_0039 8b2d92a80d98c9534c6e0f8e0945053c 161 SMART SM01001 1 152 2.8E-104 T 17-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 FORC55_0039 8b2d92a80d98c9534c6e0f8e0945053c 161 Gene3D G3DSA:3.40.50.7700 1 161 5.2E-73 T 17-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 FORC55_0039 8b2d92a80d98c9534c6e0f8e0945053c 161 SUPERFAMILY SSF52255 2 159 4.45E-67 T 17-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 FORC55_0039 8b2d92a80d98c9534c6e0f8e0945053c 161 Pfam PF00731 AIR carboxylase 3 150 1.0E-64 T 17-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 FORC55_0039 8b2d92a80d98c9534c6e0f8e0945053c 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.465 T 17-10-2018 IPR033747 Class I PurE FORC55_2634 3479a5249d365c67e795255f9b299836 494 SUPERFAMILY SSF48179 348 487 1.07E-40 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_2634 3479a5249d365c67e795255f9b299836 494 Gene3D G3DSA:3.40.50.720 1 208 1.7E-86 T 17-10-2018 FORC55_2634 3479a5249d365c67e795255f9b299836 494 Gene3D G3DSA:1.10.1040.10 209 494 6.7E-120 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 FORC55_2634 3479a5249d365c67e795255f9b299836 494 SUPERFAMILY SSF48179 210 341 1.7E-39 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_2634 3479a5249d365c67e795255f9b299836 494 SUPERFAMILY SSF51735 27 208 6.18E-58 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2634 3479a5249d365c67e795255f9b299836 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.0E-123 T 17-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 FORC55_2634 3479a5249d365c67e795255f9b299836 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.1E-59 T 17-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 FORC55_2634 3479a5249d365c67e795255f9b299836 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.598 T 17-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 FORC55_2634 3479a5249d365c67e795255f9b299836 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 5.9E-26 T 17-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 FORC55_2634 3479a5249d365c67e795255f9b299836 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 9.4E-16 T 17-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 Pfam PF01339 CheB methylesterase 158 335 3.6E-53 T 17-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 Gene3D G3DSA:3.40.50.2300 1 133 6.6E-32 T 17-10-2018 FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 SUPERFAMILY SSF52172 1 110 4.55E-29 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 PIRSF PIRSF000876 1 346 2.1E-124 T 17-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 Gene3D G3DSA:3.40.50.180 148 346 1.6E-65 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 Pfam PF00072 Response regulator receiver domain 6 111 9.3E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 SMART SM00448 4 120 1.7E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 37.004 T 17-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 FORC55_3664 c9e9960f205a9c5f3db5647cf5ee2569 346 SUPERFAMILY SSF52738 153 343 3.66E-63 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal FORC55_0050 1bc349533a49e423dba18533d622f342 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 1.6E-111 T 17-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 FORC55_0050 1bc349533a49e423dba18533d622f342 256 SUPERFAMILY SSF110399 1 235 2.88E-85 T 17-10-2018 FORC55_0050 1bc349533a49e423dba18533d622f342 256 Gene3D G3DSA:3.20.20.70 1 253 2.5E-111 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0050 1bc349533a49e423dba18533d622f342 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.272 T 17-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 FORC55_0217 bdcd25202af5310eebc647df2d8b6bc9 171 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 2.6E-82 T 17-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 FORC55_0217 bdcd25202af5310eebc647df2d8b6bc9 171 SUPERFAMILY SSF89562 1 161 2.35E-45 T 17-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily FORC55_0217 bdcd25202af5310eebc647df2d8b6bc9 171 Gene3D G3DSA:3.50.30.40 1 161 2.1E-59 T 17-10-2018 FORC55_0217 bdcd25202af5310eebc647df2d8b6bc9 171 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 6.3E-68 T 17-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 FORC55_0217 bdcd25202af5310eebc647df2d8b6bc9 171 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.0 T 17-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 FORC55_0217 bdcd25202af5310eebc647df2d8b6bc9 171 Pfam PF03737 Aldolase/RraA 6 153 3.9E-37 T 17-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Gene3D G3DSA:3.40.50.2300 379 514 2.1E-40 T 17-10-2018 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SUPERFAMILY SSF55874 49 219 1.13E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SUPERFAMILY SSF47384 2 61 5.89E-17 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SUPERFAMILY SSF52172 378 499 2.13E-37 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 107 219 3.2E-29 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Pfam PF01627 Hpt domain 551 632 4.1E-15 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Gene3D G3DSA:3.40.50.2300 239 358 2.6E-27 T 17-10-2018 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SUPERFAMILY SSF47226 515 643 5.89E-22 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Gene3D G3DSA:1.20.120.160 529 645 2.8E-22 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SUPERFAMILY SSF52172 240 362 1.85E-27 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Pfam PF00512 His Kinase A (phospho-acceptor) domain 2 60 1.0E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SMART SM00387 107 223 1.5E-35 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SMART SM00073 541 638 1.9E-10 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SMART SM00448 241 354 1.9E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SMART SM00448 381 494 1.4E-31 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Pfam PF00072 Response regulator receiver domain 384 494 2.2E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Pfam PF00072 Response regulator receiver domain 243 354 3.4E-19 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 183 201 7.6E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 207 220 7.6E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 148 162 7.6E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 166 176 7.6E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Gene3D G3DSA:3.30.565.10 59 226 1.5E-51 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1444 aacaf06685bdffd3831b693588920da5 720 SMART SM00388 2 60 8.5E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1444 aacaf06685bdffd3831b693588920da5 720 Gene3D G3DSA:1.10.287.130 1 58 1.2E-19 T 17-10-2018 FORC55_1789 293bf49fb987567fc373a6b79c248dea 320 Gene3D G3DSA:3.40.50.1400 8 319 6.7E-96 T 17-10-2018 FORC55_1789 293bf49fb987567fc373a6b79c248dea 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 319 3.0E-107 T 17-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 FORC55_1789 293bf49fb987567fc373a6b79c248dea 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 17-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 FORC55_1789 293bf49fb987567fc373a6b79c248dea 320 SUPERFAMILY SSF53800 4 319 2.13E-102 T 17-10-2018 FORC55_1789 293bf49fb987567fc373a6b79c248dea 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 37.801 T 17-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 FORC55_1789 293bf49fb987567fc373a6b79c248dea 320 Gene3D G3DSA:3.40.50.1400 163 301 6.7E-96 T 17-10-2018 FORC55_1789 293bf49fb987567fc373a6b79c248dea 320 Pfam PF00762 Ferrochelatase 7 319 1.1E-110 T 17-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 FORC55_3461 b3fb5b4b53a807c613078a1e7c1b44f9 429 PIRSF PIRSF006060 11 427 1.6E-54 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 FORC55_3461 b3fb5b4b53a807c613078a1e7c1b44f9 429 Gene3D G3DSA:1.20.1740.10 16 428 2.8E-56 T 17-10-2018 FORC55_3461 b3fb5b4b53a807c613078a1e7c1b44f9 429 Pfam PF13520 Amino acid permease 28 381 3.3E-27 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 FORC55_2227 1fb7d8be6c790d14c2885c628b50f4ab 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 8.8E-108 T 17-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 FORC55_2227 1fb7d8be6c790d14c2885c628b50f4ab 264 PIRSF PIRSF000388 1 264 6.5E-101 T 17-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 FORC55_2227 1fb7d8be6c790d14c2885c628b50f4ab 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 261 7.8E-113 T 17-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 FORC55_2227 1fb7d8be6c790d14c2885c628b50f4ab 264 SUPERFAMILY SSF51621 3 262 8.64E-105 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_2227 1fb7d8be6c790d14c2885c628b50f4ab 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.356 T 17-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 FORC55_2227 1fb7d8be6c790d14c2885c628b50f4ab 264 Gene3D G3DSA:3.20.20.60 1 262 1.6E-105 T 17-10-2018 FORC55_0517 5dec9dcea35c1c3c61da0eea4269be50 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.231 T 17-10-2018 IPR005583 Peroxide stress protein YaaA FORC55_0517 5dec9dcea35c1c3c61da0eea4269be50 257 Pfam PF03883 Peroxide stress protein YaaA 1 242 1.2E-92 T 17-10-2018 IPR005583 Peroxide stress protein YaaA FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 279 294 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 217 230 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 SMART SM00382 213 356 3.5E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 Gene3D G3DSA:1.10.10.60 474 529 7.1E-10 T 17-10-2018 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 Pfam PF02954 Bacterial regulatory protein, Fis family 486 521 2.9E-6 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 SUPERFAMILY SSF52540 193 424 6.25E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 508 528 1.0E-5 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 491 508 1.0E-5 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 Gene3D G3DSA:3.40.50.300 179 364 1.1E-62 T 17-10-2018 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 Gene3D G3DSA:1.10.8.60 365 443 1.2E-15 T 17-10-2018 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 SUPERFAMILY SSF46689 474 527 2.04E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 Pfam PF00158 Sigma-54 interaction domain 193 359 1.1E-68 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_2793 bd81779cb53b8c5826a798556fd4a149 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 406 415 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 SMART SM00382 490 657 7.2E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 SMART SM00382 209 354 3.6E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 17-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:1.10.1780.10 1 143 5.1E-43 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 SUPERFAMILY SSF81923 1 142 3.66E-59 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 SUPERFAMILY SSF52540 171 424 4.96E-65 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 17-10-2018 IPR028299 ClpA/B, conserved site 2 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:3.40.50.300 159 353 4.8E-63 T 17-10-2018 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.4E-12 T 17-10-2018 IPR004176 Clp, N-terminal FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 SMART SM01086 656 745 1.2E-37 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:3.40.50.300 442 655 1.5E-75 T 17-10-2018 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:1.10.8.60 656 754 1.6E-30 T 17-10-2018 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 7.2E-12 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 649 3.9E-47 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:1.10.8.60 354 441 8.3E-35 T 17-10-2018 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 17-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 SUPERFAMILY SSF52540 440 744 1.89E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.6E-36 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.6E-36 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.6E-36 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.6E-36 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_1639 861c467684d4ee71e9e73f357a9d3f38 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 4.8E-25 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_2312 9b647a14af2015fbdb111eda3095402e 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site FORC55_2312 9b647a14af2015fbdb111eda3095402e 652 Gene3D G3DSA:2.170.130.10 32 161 3.7E-41 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily FORC55_2312 9b647a14af2015fbdb111eda3095402e 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 17-10-2018 IPR010916 TonB box, conserved site FORC55_2312 9b647a14af2015fbdb111eda3095402e 652 SUPERFAMILY SSF56935 33 652 8.83E-128 T 17-10-2018 FORC55_2312 9b647a14af2015fbdb111eda3095402e 652 Gene3D G3DSA:2.40.170.20 167 652 1.8E-139 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_2312 9b647a14af2015fbdb111eda3095402e 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 156 1.1E-28 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_2312 9b647a14af2015fbdb111eda3095402e 652 Pfam PF00593 TonB dependent receptor 200 650 1.8E-59 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel FORC55_1339 92c191ceb6edcd6aadfe412981b26f9b 149 Gene3D G3DSA:1.10.1220.10 98 149 6.3E-21 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 FORC55_1339 92c191ceb6edcd6aadfe412981b26f9b 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.3E-26 T 17-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain FORC55_1339 92c191ceb6edcd6aadfe412981b26f9b 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.849 T 17-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 FORC55_1339 92c191ceb6edcd6aadfe412981b26f9b 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 2.0E-72 T 17-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 FORC55_1339 92c191ceb6edcd6aadfe412981b26f9b 149 Pfam PF06303 MatP N-terminal domain 2 85 2.9E-42 T 17-10-2018 IPR035087 MatP, N-terminal FORC55_1339 92c191ceb6edcd6aadfe412981b26f9b 149 Gene3D G3DSA:1.20.1270.380 1 89 7.1E-49 T 17-10-2018 IPR038339 MatP, N-terminal domain superfamily FORC55_2522 4b174f3759e169375b3a8dfbd7dcd218 401 SUPERFAMILY SSF53756 20 395 8.97E-29 T 17-10-2018 FORC55_2522 4b174f3759e169375b3a8dfbd7dcd218 401 Gene3D G3DSA:3.40.50.2000 1 199 3.2E-5 T 17-10-2018 FORC55_2522 4b174f3759e169375b3a8dfbd7dcd218 401 Gene3D G3DSA:3.40.50.2000 200 388 3.9E-16 T 17-10-2018 FORC55_2522 4b174f3759e169375b3a8dfbd7dcd218 401 Pfam PF00534 Glycosyl transferases group 1 211 377 1.5E-7 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 FORC55_0474 59dec04a10edbecf6d2bcc9491deef57 260 Pfam PF08478 POTRA domain, FtsQ-type 53 122 1.1E-16 T 17-10-2018 IPR013685 POTRA domain, FtsQ-type FORC55_0474 59dec04a10edbecf6d2bcc9491deef57 260 Gene3D G3DSA:3.10.20.310 54 122 1.1E-25 T 17-10-2018 FORC55_0474 59dec04a10edbecf6d2bcc9491deef57 260 Pfam PF03799 Cell division protein FtsQ 126 238 3.4E-25 T 17-10-2018 IPR005548 Cell division protein FtsQ/DivIB FORC55_0474 59dec04a10edbecf6d2bcc9491deef57 260 Gene3D G3DSA:3.40.50.11690 125 251 5.2E-37 T 17-10-2018 FORC55_0474 59dec04a10edbecf6d2bcc9491deef57 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 23.447 T 17-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 FORC55_0382 97f190e7edc1a1fb05c5ce362d0996f9 407 Pfam PF11871 Domain of unknown function (DUF3391) 1 125 1.5E-29 T 17-10-2018 IPR021812 Protein of unknown function DUF3391 FORC55_0382 97f190e7edc1a1fb05c5ce362d0996f9 407 Gene3D G3DSA:1.10.3210.10 4 309 7.6E-55 T 17-10-2018 FORC55_0382 97f190e7edc1a1fb05c5ce362d0996f9 407 SUPERFAMILY SSF109604 153 319 1.9E-27 T 17-10-2018 FORC55_0382 97f190e7edc1a1fb05c5ce362d0996f9 407 SMART SM00471 154 290 1.9E-9 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_0382 97f190e7edc1a1fb05c5ce362d0996f9 407 Pfam PF01966 HD domain 160 280 1.7E-16 T 17-10-2018 IPR006674 HD domain FORC55_0382 97f190e7edc1a1fb05c5ce362d0996f9 407 TIGRFAM TIGR00277 HDIG: HDIG domain 156 249 2.5E-8 T 17-10-2018 IPR006675 HDIG domain FORC55_0430 dad80ffabbd227941ff8f787ae6f0a31 529 Gene3D G3DSA:1.10.101.10 453 518 6.4E-21 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 FORC55_0430 dad80ffabbd227941ff8f787ae6f0a31 529 SUPERFAMILY SSF52540 5 264 1.58E-33 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0430 dad80ffabbd227941ff8f787ae6f0a31 529 Gene3D G3DSA:3.40.50.300 26 184 1.6E-14 T 17-10-2018 FORC55_0430 dad80ffabbd227941ff8f787ae6f0a31 529 Pfam PF13401 AAA domain 42 171 1.6E-21 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0430 dad80ffabbd227941ff8f787ae6f0a31 529 Gene3D G3DSA:3.90.70.10 335 452 1.8E-36 T 17-10-2018 FORC55_0430 dad80ffabbd227941ff8f787ae6f0a31 529 SMART SM00382 42 195 6.0E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0430 dad80ffabbd227941ff8f787ae6f0a31 529 Pfam PF01471 Putative peptidoglycan binding domain 458 514 1.2E-8 T 17-10-2018 IPR002477 Peptidoglycan binding-like FORC55_0430 dad80ffabbd227941ff8f787ae6f0a31 529 SUPERFAMILY SSF47090 447 521 3.4E-12 T 17-10-2018 IPR036365 PGBD-like superfamily FORC55_3574 008760ce3147199a559f743e93f71b9c 406 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_3574 008760ce3147199a559f743e93f71b9c 406 Pfam PF00271 Helicase conserved C-terminal domain 223 331 6.1E-26 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_3574 008760ce3147199a559f743e93f71b9c 406 SUPERFAMILY SSF52540 68 351 7.13E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3574 008760ce3147199a559f743e93f71b9c 406 Gene3D G3DSA:3.40.50.300 1 202 5.4E-65 T 17-10-2018 FORC55_3574 008760ce3147199a559f743e93f71b9c 406 SMART SM00490 250 331 2.5E-30 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_3574 008760ce3147199a559f743e93f71b9c 406 Pfam PF00270 DEAD/DEAH box helicase 24 186 5.9E-45 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_3574 008760ce3147199a559f743e93f71b9c 406 Gene3D G3DSA:3.40.50.300 205 394 2.0E-45 T 17-10-2018 FORC55_3574 008760ce3147199a559f743e93f71b9c 406 SMART SM00487 19 210 9.9E-48 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2326 f9f5263f44f0e28ac85c613905463a01 345 SMART SM00382 122 247 0.0068 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2326 f9f5263f44f0e28ac85c613905463a01 345 SUPERFAMILY SSF52540 5 335 2.85E-76 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2326 f9f5263f44f0e28ac85c613905463a01 345 Pfam PF00437 Type II/IV secretion system protein 12 270 1.6E-46 T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_2326 f9f5263f44f0e28ac85c613905463a01 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 8.1E-151 T 17-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 FORC55_2326 f9f5263f44f0e28ac85c613905463a01 345 Gene3D G3DSA:3.30.450.90 1 100 2.2E-36 T 17-10-2018 FORC55_2326 f9f5263f44f0e28ac85c613905463a01 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_2326 f9f5263f44f0e28ac85c613905463a01 345 Gene3D G3DSA:3.40.50.300 102 343 3.1E-101 T 17-10-2018 FORC55_2007 3694867c2a4cc218e6da1fc3a3ed1392 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 1.3E-89 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 FORC55_2007 3694867c2a4cc218e6da1fc3a3ed1392 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 2.8E-113 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 FORC55_2007 3694867c2a4cc218e6da1fc3a3ed1392 437 Gene3D G3DSA:3.20.20.60 1 419 4.6E-182 T 17-10-2018 FORC55_2007 3694867c2a4cc218e6da1fc3a3ed1392 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 17-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 FORC55_2007 3694867c2a4cc218e6da1fc3a3ed1392 437 PIRSF PIRSF001362 1 437 1.8E-224 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 FORC55_2007 3694867c2a4cc218e6da1fc3a3ed1392 437 Pfam PF00463 Isocitrate lyase family 14 257 5.7E-62 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 FORC55_2007 3694867c2a4cc218e6da1fc3a3ed1392 437 Pfam PF00463 Isocitrate lyase family 258 436 3.7E-52 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 FORC55_2007 3694867c2a4cc218e6da1fc3a3ed1392 437 SUPERFAMILY SSF51621 6 436 8.07E-154 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_1368 6be288d6d55324cfaca9649dd2b053db 158 Pfam PF05751 FixH 7 147 1.4E-42 T 17-10-2018 IPR008620 Nitrogen fixation protein FixH FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.4E-46 T 17-10-2018 IPR032090 Peptide chain release factor 3, C-terminal FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 Gene3D G3DSA:3.40.50.300 110 275 3.6E-116 T 17-10-2018 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.15 T 17-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 Gene3D G3DSA:3.30.70.3280 390 529 2.3E-52 T 17-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 2.3E-45 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 Gene3D G3DSA:3.40.50.300 72 379 3.6E-116 T 17-10-2018 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 SUPERFAMILY SSF54980 393 468 3.02E-17 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 153 2.5E-19 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 2.2E-304 T 17-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 SUPERFAMILY SSF50447 262 393 3.06E-28 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.2E-9 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 FORC55_2076 6c28bd100c21520ff9fa27091d1066a3 529 SUPERFAMILY SSF52540 9 278 1.34E-85 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0762 c722e82551746932e40fe511b429da19 388 SUPERFAMILY SSF56059 1 238 1.71E-78 T 17-10-2018 FORC55_0762 c722e82551746932e40fe511b429da19 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.142 T 17-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0762 c722e82551746932e40fe511b429da19 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.9E-172 T 17-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0762 c722e82551746932e40fe511b429da19 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 17-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_0762 c722e82551746932e40fe511b429da19 388 Pfam PF00549 CoA-ligase 262 382 2.0E-24 T 17-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_0762 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.30.470.20 1 234 4.4E-92 T 17-10-2018 FORC55_0762 c722e82551746932e40fe511b429da19 388 SUPERFAMILY SSF52210 240 385 2.49E-53 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_0762 c722e82551746932e40fe511b429da19 388 Pfam PF08442 ATP-grasp domain 2 203 5.1E-79 T 17-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0762 c722e82551746932e40fe511b429da19 388 PIRSF PIRSF001554 1 388 2.8E-154 T 17-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0762 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.30.1490.20 21 104 4.4E-92 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_0762 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.40.50.261 240 388 4.5E-57 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 FORC55_2026 0a0ba74a25a41379069f940674196945 107 Gene3D G3DSA:3.30.429.10 1 107 1.1E-46 T 17-10-2018 IPR014347 Tautomerase/MIF superfamily FORC55_2026 0a0ba74a25a41379069f940674196945 107 SUPERFAMILY SSF55331 1 107 9.77E-39 T 17-10-2018 IPR014347 Tautomerase/MIF superfamily FORC55_2026 0a0ba74a25a41379069f940674196945 107 Pfam PF08921 Domain of unknown function (DUF1904) 1 106 1.6E-38 T 17-10-2018 IPR015017 Protein of unknown function DUF1904 FORC55_1524 3558446b4c592ee6515ea72c9042a658 523 Pfam PF01471 Putative peptidoglycan binding domain 225 264 3.1E-8 T 17-10-2018 IPR002477 Peptidoglycan binding-like FORC55_1524 3558446b4c592ee6515ea72c9042a658 523 SUPERFAMILY SSF141523 289 450 4.97E-19 T 17-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like FORC55_1524 3558446b4c592ee6515ea72c9042a658 523 Gene3D G3DSA:2.40.440.10 235 495 8.6E-30 T 17-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like FORC55_1524 3558446b4c592ee6515ea72c9042a658 523 SUPERFAMILY SSF47090 198 272 6.2E-12 T 17-10-2018 IPR036365 PGBD-like superfamily FORC55_1524 3558446b4c592ee6515ea72c9042a658 523 Pfam PF03734 L,D-transpeptidase catalytic domain 292 460 6.0E-30 T 17-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 FORC55_2010 2ccf45fbd88d85f8f117fe8750b6595e 201 SUPERFAMILY SSF52833 1 196 2.74E-66 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_2010 2ccf45fbd88d85f8f117fe8750b6595e 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 9.0E-8 T 17-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 FORC55_2010 2ccf45fbd88d85f8f117fe8750b6595e 201 PIRSF PIRSF000239 1 200 8.7E-59 T 17-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 FORC55_2010 2ccf45fbd88d85f8f117fe8750b6595e 201 Gene3D G3DSA:3.40.30.10 1 198 3.2E-71 T 17-10-2018 FORC55_2010 2ccf45fbd88d85f8f117fe8750b6595e 201 Pfam PF00578 AhpC/TSA family 4 139 1.9E-33 T 17-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 SUPERFAMILY SSF52172 193 319 2.7E-28 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 SMART SM00448 193 318 8.7E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 Pfam PF00072 Response regulator receiver domain 195 316 1.5E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 Gene3D G3DSA:2.30.30.40 36 154 1.6E-29 T 17-10-2018 FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 PIRSF PIRSF002867 1 325 5.5E-102 T 17-10-2018 IPR024181 Chemotaxis response regulator CheV FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 Pfam PF01584 CheW-like domain 37 162 1.8E-29 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 Gene3D G3DSA:3.40.50.2300 188 324 2.7E-29 T 17-10-2018 FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 Gene3D G3DSA:2.40.50.180 44 160 1.6E-29 T 17-10-2018 FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 SUPERFAMILY SSF50341 7 165 4.45E-32 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_1234 60f6d7369df304e8d140ca730a36803c 325 SMART SM00260 14 160 9.6E-25 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0561 955cb9748354c6ea8a09d81f7c2a0cc5 226 Gene3D G3DSA:2.60.120.10 114 204 1.2E-22 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_0561 955cb9748354c6ea8a09d81f7c2a0cc5 226 Gene3D G3DSA:1.10.10.1320 1 112 2.1E-17 T 17-10-2018 FORC55_0561 955cb9748354c6ea8a09d81f7c2a0cc5 226 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 223 8.9E-93 T 17-10-2018 IPR012807 Anti-sigma factor ChrR, putative FORC55_0561 955cb9748354c6ea8a09d81f7c2a0cc5 226 Pfam PF12973 ChrR Cupin-like domain 121 200 1.0E-12 T 17-10-2018 IPR025979 ChrR-like cupin domain FORC55_0561 955cb9748354c6ea8a09d81f7c2a0cc5 226 SUPERFAMILY SSF51182 115 210 4.84E-13 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_0561 955cb9748354c6ea8a09d81f7c2a0cc5 226 Pfam PF13490 Putative zinc-finger 9 37 2.9E-5 T 17-10-2018 IPR027383 Putative zinc-finger FORC55_1424 050ecc53bb7051bb0e025234579a7766 443 SUPERFAMILY SSF55073 275 432 1.33E-47 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1424 050ecc53bb7051bb0e025234579a7766 443 Gene3D G3DSA:3.30.70.270 263 439 6.8E-55 T 17-10-2018 FORC55_1424 050ecc53bb7051bb0e025234579a7766 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 426 5.4E-48 T 17-10-2018 IPR000160 GGDEF domain FORC55_1424 050ecc53bb7051bb0e025234579a7766 443 SMART SM00267 259 431 3.9E-56 T 17-10-2018 IPR000160 GGDEF domain FORC55_1424 050ecc53bb7051bb0e025234579a7766 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 430 1.8E-46 T 17-10-2018 IPR000160 GGDEF domain FORC55_1424 050ecc53bb7051bb0e025234579a7766 443 Gene3D G3DSA:1.20.1480.50 147 249 1.1E-5 T 17-10-2018 FORC55_1424 050ecc53bb7051bb0e025234579a7766 443 SUPERFAMILY SSF158472 197 240 8.24E-5 T 17-10-2018 FORC55_0182 5cbb5b6af6a47053be104a96c498c6f8 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.7E-17 T 17-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 FORC55_0182 5cbb5b6af6a47053be104a96c498c6f8 90 SMART SM01409 8 61 2.4E-16 T 17-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 FORC55_0182 5cbb5b6af6a47053be104a96c498c6f8 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 17-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_0182 5cbb5b6af6a47053be104a96c498c6f8 90 SUPERFAMILY SSF63562 1 78 6.67E-26 T 17-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 FORC55_0182 5cbb5b6af6a47053be104a96c498c6f8 90 Gene3D G3DSA:3.90.940.10 1 90 9.3E-30 T 17-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 FORC55_0182 5cbb5b6af6a47053be104a96c498c6f8 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.0E-29 T 17-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_1807 766de60543cb6d28768947ca8df67847 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 5.2E-66 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme FORC55_1807 766de60543cb6d28768947ca8df67847 322 SUPERFAMILY SSF53686 4 309 4.32E-95 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme FORC55_1807 766de60543cb6d28768947ca8df67847 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 17-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 FORC55_1807 766de60543cb6d28768947ca8df67847 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.5E-134 T 17-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 FORC55_1807 766de60543cb6d28768947ca8df67847 322 Gene3D G3DSA:3.40.50.1100 12 306 4.6E-124 T 17-10-2018 FORC55_1807 766de60543cb6d28768947ca8df67847 322 Gene3D G3DSA:3.40.50.1100 43 145 4.6E-124 T 17-10-2018 FORC55_1807 766de60543cb6d28768947ca8df67847 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.2E-141 T 17-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 FORC55_3247 eb5d91c84ea6d3d3cbebc3227ec0d140 344 SUPERFAMILY SSF56925 181 344 8.37E-7 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel FORC55_3247 eb5d91c84ea6d3d3cbebc3227ec0d140 344 Pfam PF16941 Putative cyclodextrin porin 1 344 1.2E-191 T 17-10-2018 IPR031609 Cyclodextrin porin CymA GO:0098657 FORC55_0399 079a6ce82e23d808168b97682d9881d5 102 SUPERFAMILY SSF102829 6 95 1.96E-24 T 17-10-2018 IPR036192 Cell division protein ZapA-like superfamily FORC55_0399 079a6ce82e23d808168b97682d9881d5 102 Gene3D G3DSA:1.10.20.30 1 47 5.4E-20 T 17-10-2018 FORC55_0399 079a6ce82e23d808168b97682d9881d5 102 Pfam PF05164 Cell division protein ZapA 6 89 3.3E-20 T 17-10-2018 IPR007838 Cell division protein ZapA-like FORC55_3294 3a5e8e322122ae05c008950b08fde682 248 Pfam PF05742 Transport and Golgi organisation 2 12 119 1.5E-5 T 17-10-2018 IPR008551 Transport and Golgi organisation protein 2 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 Gene3D G3DSA:1.25.40.10 282 454 7.1E-18 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SUPERFAMILY SSF55073 483 632 3.45E-20 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 Gene3D G3DSA:3.30.70.270 474 636 2.8E-22 T 17-10-2018 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 632 2.8E-18 T 17-10-2018 IPR000160 GGDEF domain FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SMART SM00028 329 362 0.048 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SMART SM00028 209 242 65.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SMART SM00028 172 205 11.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SMART SM00028 249 282 12.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SMART SM00028 369 402 380.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SMART SM00028 289 322 17.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 Pfam PF13181 Tetratricopeptide repeat 331 360 0.034 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 Pfam PF13181 Tetratricopeptide repeat 369 394 0.16 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SMART SM00267 466 636 5.8E-10 T 17-10-2018 IPR000160 GGDEF domain FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SUPERFAMILY SSF48452 288 398 3.16E-12 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 Pfam PF13424 Tetratricopeptide repeat 211 277 3.5E-9 T 17-10-2018 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 Gene3D G3DSA:1.25.40.10 94 281 7.8E-22 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 SUPERFAMILY SSF48452 175 318 5.82E-20 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1427 304e4f2de0cbd45997f0aee679bba048 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 630 1.3E-16 T 17-10-2018 IPR000160 GGDEF domain FORC55_2201 29c7b15f26dc8c273ca386c3c05d6e21 556 PIRSF PIRSF002741 7 532 2.9E-66 T 17-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 FORC55_2201 29c7b15f26dc8c273ca386c3c05d6e21 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 445 7.9E-76 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_2201 29c7b15f26dc8c273ca386c3c05d6e21 556 SUPERFAMILY SSF53850 40 539 1.81E-105 T 17-10-2018 FORC55_2201 29c7b15f26dc8c273ca386c3c05d6e21 556 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 17-10-2018 IPR023765 Solute-binding protein family 5, conserved site FORC55_2201 29c7b15f26dc8c273ca386c3c05d6e21 556 Gene3D G3DSA:3.40.190.10 43 539 1.2E-202 T 17-10-2018 FORC55_2201 29c7b15f26dc8c273ca386c3c05d6e21 556 Gene3D G3DSA:3.10.105.10 268 515 1.2E-202 T 17-10-2018 FORC55_2201 29c7b15f26dc8c273ca386c3c05d6e21 556 Gene3D G3DSA:3.90.76.10 62 168 1.2E-202 T 17-10-2018 FORC55_1522 b25f44a2753f3a177cf9f589a6b7dde5 218 SMART SM00849 14 195 2.8E-39 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_1522 b25f44a2753f3a177cf9f589a6b7dde5 218 Pfam PF00753 Metallo-beta-lactamase superfamily 12 195 3.6E-30 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_1522 b25f44a2753f3a177cf9f589a6b7dde5 218 Gene3D G3DSA:3.60.15.10 3 213 2.7E-77 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_1522 b25f44a2753f3a177cf9f589a6b7dde5 218 SUPERFAMILY SSF56281 4 211 9.88E-56 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 Pfam PF01134 Glucose inhibited division protein A 8 399 2.6E-170 T 17-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 SUPERFAMILY SSF51905 6 261 3.01E-50 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 Gene3D G3DSA:3.50.50.60 1 232 6.8E-91 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 Gene3D G3DSA:3.50.50.60 296 458 2.2E-55 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 Pfam PF13932 GidA associated domain 403 616 1.4E-75 T 17-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 SMART SM01228 546 617 5.8E-42 T 17-10-2018 FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 Gene3D G3DSA:1.10.10.1800 459 550 4.0E-30 T 17-10-2018 FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.479 T 17-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 Gene3D G3DSA:1.10.150.570 569 622 1.4E-22 T 17-10-2018 FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.3E-292 T 17-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 17-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 FORC55_2657 aa940e836a74a4d97ff47cd8022c70ae 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 17-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 FORC55_3489 088c737718c1999234225db044d36d1f 500 PIRSF PIRSF000110 3 489 3.7E-178 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 Gene3D G3DSA:3.30.360.10 180 488 2.3E-124 T 17-10-2018 FORC55_3489 088c737718c1999234225db044d36d1f 500 SUPERFAMILY SSF55347 181 489 6.87E-114 T 17-10-2018 FORC55_3489 088c737718c1999234225db044d36d1f 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 17-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 Gene3D G3DSA:3.40.50.720 4 179 3.9E-58 T 17-10-2018 FORC55_3489 088c737718c1999234225db044d36d1f 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 85.778 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 SUPERFAMILY SSF51735 4 194 9.32E-61 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3489 088c737718c1999234225db044d36d1f 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 8.2E-199 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 2.1E-63 T 17-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 2.0E-114 T 17-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 2.3E-49 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 2.3E-49 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 2.3E-49 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 2.3E-49 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_3489 088c737718c1999234225db044d36d1f 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 2.3E-49 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 Gene3D G3DSA:3.40.50.80 112 254 6.8E-32 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 274 342 5.9E-14 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 Gene3D G3DSA:3.10.20.30 263 351 1.7E-21 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 SUPERFAMILY SSF52343 114 247 4.85E-33 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 Pfam PF00175 Oxidoreductase NAD-binding domain 120 228 3.3E-13 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 Gene3D G3DSA:2.40.30.10 6 108 7.0E-27 T 17-10-2018 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 SUPERFAMILY SSF63380 11 108 2.89E-25 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 119 138 4.5E-5 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 40 52 4.5E-5 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 222 4.5E-5 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 SUPERFAMILY SSF54292 237 349 7.87E-26 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 FORC55_2365 8e7a2ce934b4b32c105b147b9f0d98b4 351 Pfam PF00970 Oxidoreductase FAD-binding domain 16 107 1.7E-15 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 SMART SM00490 519 603 1.7E-17 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Gene3D G3DSA:3.40.50.300 432 635 2.8E-46 T 17-10-2018 FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.051 T 17-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 2.0E-15 T 17-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 SUPERFAMILY SSF52540 118 378 4.72E-36 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 SMART SM00487 150 342 7.6E-14 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 SUPERFAMILY SSF52540 273 647 7.15E-43 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Gene3D G3DSA:3.30.360.80 714 786 1.4E-30 T 17-10-2018 FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Gene3D G3DSA:2.30.30.140 1 53 9.9E-24 T 17-10-2018 FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Gene3D G3DSA:2.30.30.930 55 114 9.8E-26 T 17-10-2018 FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 3.0E-145 T 17-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Pfam PF00271 Helicase conserved C-terminal domain 495 603 1.3E-15 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0373 07d0ea70925b4ad480a80fd0148e1f33 969 Gene3D G3DSA:3.40.50.10810 150 431 8.4E-103 T 17-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily FORC55_1736 75f5b6253f7fe037bc8c2810ac2c69ef 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 5.1E-21 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 FORC55_1736 75f5b6253f7fe037bc8c2810ac2c69ef 187 Pfam PF04542 Sigma-70 region 2 29 95 1.8E-16 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_1736 75f5b6253f7fe037bc8c2810ac2c69ef 187 SUPERFAMILY SSF88659 117 176 1.87E-12 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_1736 75f5b6253f7fe037bc8c2810ac2c69ef 187 Gene3D G3DSA:1.10.10.10 114 176 3.4E-15 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1736 75f5b6253f7fe037bc8c2810ac2c69ef 187 Pfam PF08281 Sigma-70, region 4 119 171 4.4E-11 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_1736 75f5b6253f7fe037bc8c2810ac2c69ef 187 Gene3D G3DSA:1.10.1740.10 10 91 8.4E-18 T 17-10-2018 FORC55_1736 75f5b6253f7fe037bc8c2810ac2c69ef 187 SUPERFAMILY SSF88946 23 107 6.54E-20 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_1736 75f5b6253f7fe037bc8c2810ac2c69ef 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 17-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 Gene3D G3DSA:3.40.710.10 239 473 6.1E-53 T 17-10-2018 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 Gene3D G3DSA:3.50.80.20 94 179 9.6E-11 T 17-10-2018 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 Gene3D G3DSA:3.40.710.10 20 93 9.2E-7 T 17-10-2018 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 281 303 1.9E-27 T 17-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 1.9E-27 T 17-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 340 354 1.9E-27 T 17-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 1.9E-27 T 17-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 419 432 1.9E-27 T 17-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 29 442 4.2E-97 T 17-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 58 441 6.6E-97 T 17-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2191 601855d59bc297e6e3a6f41c4a8f52cd 481 SUPERFAMILY SSF56601 29 444 2.74E-85 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_2113 f8545f63c264276c2a41ce53e72e41ab 139 PIRSF PIRSF002070 1 138 2.2E-20 T 17-10-2018 FORC55_2113 f8545f63c264276c2a41ce53e72e41ab 139 Gene3D G3DSA:2.40.50.140 1 125 5.5E-31 T 17-10-2018 FORC55_2113 f8545f63c264276c2a41ce53e72e41ab 139 Pfam PF00436 Single-strand binding protein family 3 107 3.4E-20 T 17-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 FORC55_2113 f8545f63c264276c2a41ce53e72e41ab 139 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 124 6.3E-25 T 17-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 FORC55_2113 f8545f63c264276c2a41ce53e72e41ab 139 SUPERFAMILY SSF50249 1 128 1.75E-30 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3538 ccf8e239fed86d42b5318bbbe7523217 106 Pfam PF01906 Putative heavy-metal-binding 1 105 7.9E-42 T 17-10-2018 IPR002765 Uncharacterised protein family UPF0145 FORC55_3538 ccf8e239fed86d42b5318bbbe7523217 106 Gene3D G3DSA:3.30.110.70 2 106 1.3E-44 T 17-10-2018 FORC55_3538 ccf8e239fed86d42b5318bbbe7523217 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 25.265 T 17-10-2018 IPR002765 Uncharacterised protein family UPF0145 FORC55_3538 ccf8e239fed86d42b5318bbbe7523217 106 SUPERFAMILY SSF117782 1 106 5.36E-39 T 17-10-2018 IPR035439 UPF0145 domain superfamily FORC55_0870 6e6b2cbb269826671f23b3dfc24ddc27 623 Pfam PF07690 Major Facilitator Superfamily 18 315 2.7E-13 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_0870 6e6b2cbb269826671f23b3dfc24ddc27 623 Gene3D G3DSA:1.20.1250.20 9 421 1.8E-25 T 17-10-2018 FORC55_0870 6e6b2cbb269826671f23b3dfc24ddc27 623 SUPERFAMILY SSF103473 14 423 3.53E-26 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_0870 6e6b2cbb269826671f23b3dfc24ddc27 623 Pfam PF01553 Acyltransferase 440 566 4.5E-25 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_0870 6e6b2cbb269826671f23b3dfc24ddc27 623 SUPERFAMILY SSF69593 406 568 5.75E-28 T 17-10-2018 FORC55_0870 6e6b2cbb269826671f23b3dfc24ddc27 623 SMART SM00563 455 569 1.6E-36 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 SMART SM00345 6 65 9.6E-17 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 Gene3D G3DSA:1.10.10.10 2 69 4.1E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 2.8E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 2.8E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 SMART SM00866 86 225 4.1E-32 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 230 3.0E-111 T 17-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 SUPERFAMILY SSF64288 53 229 2.51E-40 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 Gene3D G3DSA:3.40.1410.10 70 228 2.7E-34 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 SUPERFAMILY SSF46785 3 69 9.58E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.2E-18 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_3235 efd1c527e18fe71ed4941b65bd958d73 234 Pfam PF07702 UTRA domain 86 224 4.3E-35 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 FORC55_2125 9f2cbfac66418f74111355ff76b51014 302 Gene3D G3DSA:3.30.70.270 135 301 1.5E-55 T 17-10-2018 FORC55_2125 9f2cbfac66418f74111355ff76b51014 302 SMART SM00267 128 299 4.2E-52 T 17-10-2018 IPR000160 GGDEF domain FORC55_2125 9f2cbfac66418f74111355ff76b51014 302 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 295 1.1E-44 T 17-10-2018 IPR000160 GGDEF domain FORC55_2125 9f2cbfac66418f74111355ff76b51014 302 SUPERFAMILY SSF55073 144 300 7.61E-49 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2125 9f2cbfac66418f74111355ff76b51014 302 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 297 2.7E-46 T 17-10-2018 IPR000160 GGDEF domain FORC55_1720 f16aa2a9e1c93f11070e42d2b857468e 355 SUPERFAMILY SSF53686 23 335 1.07E-69 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme FORC55_1720 f16aa2a9e1c93f11070e42d2b857468e 355 Gene3D G3DSA:3.40.50.1100 25 324 5.6E-66 T 17-10-2018 FORC55_1720 f16aa2a9e1c93f11070e42d2b857468e 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 316 4.6E-40 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme FORC55_1720 f16aa2a9e1c93f11070e42d2b857468e 355 Gene3D G3DSA:3.40.50.1100 51 157 5.6E-66 T 17-10-2018 FORC55_0216 c4ede8b519bd8abcad09a9a821cc5fb7 301 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 9 292 3.6E-98 T 17-10-2018 FORC55_0216 c4ede8b519bd8abcad09a9a821cc5fb7 301 PIRSF PIRSF005355 1 299 2.2E-82 T 17-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 FORC55_0216 c4ede8b519bd8abcad09a9a821cc5fb7 301 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 1 294 19.765 T 17-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 FORC55_0216 c4ede8b519bd8abcad09a9a821cc5fb7 301 Pfam PF01040 UbiA prenyltransferase family 16 265 2.3E-36 T 17-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 FORC55_1274 ed466f199f1f57367efb3e63506db636 253 SUPERFAMILY SSF46785 4 77 4.5E-14 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1274 ed466f199f1f57367efb3e63506db636 253 Pfam PF00455 DeoR C terminal sensor domain 76 234 5.9E-45 T 17-10-2018 IPR014036 DeoR C-terminal sensor domain FORC55_1274 ed466f199f1f57367efb3e63506db636 253 Gene3D G3DSA:1.10.10.10 2 57 2.6E-11 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1274 ed466f199f1f57367efb3e63506db636 253 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 6.9E-16 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_1274 ed466f199f1f57367efb3e63506db636 253 SMART SM01134 74 235 1.1E-60 T 17-10-2018 FORC55_1274 ed466f199f1f57367efb3e63506db636 253 SUPERFAMILY SSF100950 75 234 3.68E-24 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_1274 ed466f199f1f57367efb3e63506db636 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 2.1E-7 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_1274 ed466f199f1f57367efb3e63506db636 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 2.1E-7 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_1274 ed466f199f1f57367efb3e63506db636 253 SMART SM00420 7 60 9.1E-14 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 FORC55_1274 ed466f199f1f57367efb3e63506db636 253 Gene3D G3DSA:3.30.750.70 75 138 1.9E-5 T 17-10-2018 FORC55_1504 18c0f59b45e3af2b69e05e731152767b 708 Pfam PF13632 Glycosyl transferase family group 2 218 407 3.9E-13 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 FORC55_1504 18c0f59b45e3af2b69e05e731152767b 708 Gene3D G3DSA:3.90.550.10 109 346 1.7E-17 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_1504 18c0f59b45e3af2b69e05e731152767b 708 SUPERFAMILY SSF53448 119 407 3.71E-24 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_3244 6a95c744326defc10db99160f05dcb03 376 Gene3D G3DSA:2.40.50.940 228 364 1.2E-31 T 17-10-2018 FORC55_3244 6a95c744326defc10db99160f05dcb03 376 Pfam PF00005 ABC transporter 21 162 4.9E-29 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3244 6a95c744326defc10db99160f05dcb03 376 SMART SM00382 29 217 8.3E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3244 6a95c744326defc10db99160f05dcb03 376 Gene3D G3DSA:2.40.50.140 296 355 1.2E-31 T 17-10-2018 FORC55_3244 6a95c744326defc10db99160f05dcb03 376 SUPERFAMILY SSF50331 242 372 7.29E-27 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_3244 6a95c744326defc10db99160f05dcb03 376 Pfam PF08402 TOBE domain 290 363 8.0E-8 T 17-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 FORC55_3244 6a95c744326defc10db99160f05dcb03 376 SUPERFAMILY SSF52540 4 249 1.06E-78 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3244 6a95c744326defc10db99160f05dcb03 376 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3244 6a95c744326defc10db99160f05dcb03 376 Gene3D G3DSA:3.40.50.300 3 227 8.7E-60 T 17-10-2018 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 Pfam PF00012 Hsp70 protein 133 315 5.9E-15 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 SUPERFAMILY SSF53067 223 456 6.48E-20 T 17-10-2018 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 Gene3D G3DSA:3.30.420.40 8 210 1.7E-33 T 17-10-2018 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 Gene3D G3DSA:3.90.640.10 263 342 1.7E-33 T 17-10-2018 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 Pfam PF12531 DNA-K related protein 688 935 1.2E-102 T 17-10-2018 IPR021030 Protein of unknown function DUF3731 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 Gene3D G3DSA:3.30.420.40 211 262 1.7E-33 T 17-10-2018 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 SUPERFAMILY SSF53067 6 210 3.02E-32 T 17-10-2018 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 PRINTS PR00301 70kDa heat shock protein signature 165 185 1.2E-7 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 PRINTS PR00301 70kDa heat shock protein signature 232 242 1.2E-7 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1421 5a7886f9286e20c86eacb46ace197aa2 938 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.2E-7 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_2776 055ea431c7438d252e371b0c8f858a8b 512 SUPERFAMILY SSF141868 262 500 8.76E-68 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2776 055ea431c7438d252e371b0c8f858a8b 512 Gene3D G3DSA:3.20.20.450 256 503 2.7E-66 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2776 055ea431c7438d252e371b0c8f858a8b 512 SMART SM00052 255 493 5.1E-74 T 17-10-2018 IPR001633 EAL domain FORC55_2776 055ea431c7438d252e371b0c8f858a8b 512 Pfam PF00563 EAL domain 264 488 5.7E-56 T 17-10-2018 IPR001633 EAL domain FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 Pfam PF08448 PAS fold 23 132 4.8E-15 T 17-10-2018 IPR013656 PAS fold-4 FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 SUPERFAMILY SSF55073 149 224 3.84E-21 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 140 1.3E-8 T 17-10-2018 IPR000014 PAS domain FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 SUPERFAMILY SSF55785 23 134 5.41E-17 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 224 1.1E-21 T 17-10-2018 IPR000160 GGDEF domain FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 SMART SM00091 17 83 0.0018 T 17-10-2018 IPR000014 PAS domain FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 224 1.7E-23 T 17-10-2018 IPR000160 GGDEF domain FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 SMART SM00267 133 224 0.0011 T 17-10-2018 IPR000160 GGDEF domain FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 Gene3D G3DSA:3.30.450.20 7 139 9.2E-17 T 17-10-2018 FORC55_3526 9b4ecc759e65b855cc946dc70c810bd4 224 Gene3D G3DSA:3.30.70.270 140 224 1.6E-25 T 17-10-2018 FORC55_2784 c039b1176c3bc3bdfd3fc7c991bc5457 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 16 489 4.6E-214 T 17-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath FORC55_2784 c039b1176c3bc3bdfd3fc7c991bc5457 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 488 5.7E-181 T 17-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Gene3D G3DSA:3.30.70.1430 41 799 8.3E-258 T 17-10-2018 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 SUPERFAMILY SSF82693 41 132 1.46E-22 T 17-10-2018 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 SUPERFAMILY SSF82714 184 264 3.79E-11 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Gene3D G3DSA:3.30.70.1440 652 849 8.3E-258 T 17-10-2018 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 SUPERFAMILY SSF82866 790 1026 1.44E-48 T 17-10-2018 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Gene3D G3DSA:1.20.1640.10 12 509 8.3E-258 T 17-10-2018 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 1.2E-171 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Gene3D G3DSA:3.30.70.1320 135 327 8.3E-258 T 17-10-2018 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.0E-27 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 SUPERFAMILY SSF82866 289 491 8.5E-40 T 17-10-2018 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Gene3D G3DSA:3.30.70.1430 565 651 8.3E-258 T 17-10-2018 FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Gene3D G3DSA:3.30.2090.10 703 791 8.3E-258 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Gene3D G3DSA:3.30.2090.10 178 268 8.3E-258 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 SUPERFAMILY SSF82714 707 786 1.7E-5 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2194 f7d2915c9acc27ec7da4fd4e95f10140 1039 Gene3D G3DSA:1.20.1640.10 510 1018 8.3E-258 T 17-10-2018 FORC55_3532 d1c5dca3db34f693a515d7fa61c2b003 515 SUPERFAMILY SSF160964 15 261 5.36E-84 T 17-10-2018 FORC55_3532 d1c5dca3db34f693a515d7fa61c2b003 515 Gene3D G3DSA:1.10.3720.10 271 513 2.3E-68 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3532 d1c5dca3db34f693a515d7fa61c2b003 515 Gene3D G3DSA:1.20.58.370 6 96 2.9E-34 T 17-10-2018 IPR035277 MalF, N-terminal FORC55_3532 d1c5dca3db34f693a515d7fa61c2b003 515 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 503 8.6E-17 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3532 d1c5dca3db34f693a515d7fa61c2b003 515 Gene3D G3DSA:2.40.430.10 119 205 3.9E-59 T 17-10-2018 FORC55_3532 d1c5dca3db34f693a515d7fa61c2b003 515 Gene3D G3DSA:3.10.650.10 99 269 3.9E-59 T 17-10-2018 FORC55_3532 d1c5dca3db34f693a515d7fa61c2b003 515 SUPERFAMILY SSF161098 264 504 3.4E-56 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3532 d1c5dca3db34f693a515d7fa61c2b003 515 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 101 261 2.4E-60 T 17-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 SUPERFAMILY SSF48300 4 57 1.83E-15 T 17-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 1.8E-16 T 17-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.018 T 17-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 SUPERFAMILY SSF54736 50 121 2.62E-24 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 Gene3D G3DSA:1.20.5.710 2 50 4.9E-24 T 17-10-2018 FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 1.9E-46 T 17-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 Gene3D G3DSA:3.30.1390.10 51 121 1.7E-30 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 121 1.0E-12 T 17-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2457 54b9e5a34fd1e6090eda9545e134ce16 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 3.7E-30 T 17-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1506 16611e9cccfe071d132f83b3c993b007 252 Gene3D G3DSA:3.20.20.370 1 244 1.8E-70 T 17-10-2018 FORC55_1506 16611e9cccfe071d132f83b3c993b007 252 Pfam PF04794 YdjC-like protein 2 230 3.8E-53 T 17-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like FORC55_1506 16611e9cccfe071d132f83b3c993b007 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 240 40.03 T 17-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 FORC55_1506 16611e9cccfe071d132f83b3c993b007 252 SUPERFAMILY SSF88713 1 243 1.31E-69 T 17-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 Gene3D G3DSA:1.10.240.10 191 304 5.2E-140 T 17-10-2018 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 Gene3D G3DSA:3.40.50.620 5 333 5.2E-140 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.5E-106 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.227 T 17-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 SUPERFAMILY SSF52374 5 334 2.49E-91 T 17-10-2018 FORC55_0261 12cef2bbd7b92a1522feb24240f6d210 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 2.4E-77 T 17-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1755 1100ebe48f0cfc264afc6cbc8a8fa3ba 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 3.1E-85 T 17-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 FORC55_1755 1100ebe48f0cfc264afc6cbc8a8fa3ba 170 PIRSF PIRSF006443 1 166 1.4E-66 T 17-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 FORC55_1755 1100ebe48f0cfc264afc6cbc8a8fa3ba 170 SMART SM00852 14 158 2.7E-30 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1755 1100ebe48f0cfc264afc6cbc8a8fa3ba 170 Gene3D G3DSA:3.40.980.10 2 170 2.8E-53 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily FORC55_1755 1100ebe48f0cfc264afc6cbc8a8fa3ba 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.2E-35 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1755 1100ebe48f0cfc264afc6cbc8a8fa3ba 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 17-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 FORC55_1755 1100ebe48f0cfc264afc6cbc8a8fa3ba 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 1.5E-37 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_1755 1100ebe48f0cfc264afc6cbc8a8fa3ba 170 SUPERFAMILY SSF53218 7 168 2.09E-47 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily FORC55_1700 017e94737faefe9a1cd90857b655556b 121 Pfam PF00072 Response regulator receiver domain 7 115 6.6E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1700 017e94737faefe9a1cd90857b655556b 121 Gene3D G3DSA:3.40.50.2300 1 119 5.8E-26 T 17-10-2018 FORC55_1700 017e94737faefe9a1cd90857b655556b 121 SMART SM00448 3 115 1.2E-19 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1700 017e94737faefe9a1cd90857b655556b 121 SUPERFAMILY SSF52172 4 118 1.11E-26 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3677 3c584e59da4dbdd5806a949bb0da0b20 547 Pfam PF00884 Sulfatase 239 527 2.5E-48 T 17-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 FORC55_3677 3c584e59da4dbdd5806a949bb0da0b20 547 Gene3D G3DSA:3.40.720.10 214 546 9.3E-82 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 FORC55_3677 3c584e59da4dbdd5806a949bb0da0b20 547 SUPERFAMILY SSF53649 303 528 1.46E-19 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 FORC55_3677 3c584e59da4dbdd5806a949bb0da0b20 547 Pfam PF08019 Domain of unknown function (DUF1705) 57 208 2.2E-47 T 17-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 FORC55_0898 15a8183b346c33f19011d18846e9fd66 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 44.19 T 17-10-2018 IPR003846 Uncharacterised protein family UPF0061 FORC55_0898 15a8183b346c33f19011d18846e9fd66 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 10 458 3.8E-151 T 17-10-2018 IPR003846 Uncharacterised protein family UPF0061 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 SUPERFAMILY SSF55681 467 689 1.84E-54 T 17-10-2018 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 SMART SM00873 212 385 3.7E-99 T 17-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 SUPERFAMILY SSF54991 697 794 2.35E-30 T 17-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 SUPERFAMILY SSF46955 403 475 3.66E-20 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 SUPERFAMILY SSF50249 40 194 5.14E-47 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 SMART SM00896 701 794 1.3E-45 T 17-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 5.3E-29 T 17-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Gene3D G3DSA:3.30.930.10 486 691 2.9E-64 T 17-10-2018 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 3.8E-280 T 17-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 SMART SM00874 403 471 5.6E-30 T 17-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Gene3D G3DSA:3.30.70.380 702 795 1.7E-29 T 17-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Pfam PF03483 B3/4 domain 212 385 4.9E-72 T 17-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Gene3D G3DSA:3.30.56.10 403 475 4.7E-27 T 17-10-2018 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Gene3D G3DSA:3.50.40.10 197 394 5.8E-82 T 17-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 SUPERFAMILY SSF56037 196 394 6.28E-78 T 17-10-2018 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.9E-25 T 17-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.0E-19 T 17-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Gene3D G3DSA:3.30.56.10 7 179 1.7E-69 T 17-10-2018 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.771 T 17-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 FORC55_1565 dd3511b7511bf6cc46e629a1a386b534 795 Gene3D G3DSA:2.40.50.140 39 154 1.7E-69 T 17-10-2018 FORC55_0997 6764a0dfe3509ecfc90ba1bbc1cbae54 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.455 T 17-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 FORC55_0997 6764a0dfe3509ecfc90ba1bbc1cbae54 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 4.7E-42 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel FORC55_0997 6764a0dfe3509ecfc90ba1bbc1cbae54 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 2.0E-91 T 17-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 Gene3D G3DSA:3.40.190.10 100 199 1.2E-84 T 17-10-2018 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 1.0E-79 T 17-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.692 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 Gene3D G3DSA:3.30.160.40 221 306 6.9E-29 T 17-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 295 5.0E-20 T 17-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 SUPERFAMILY SSF53850 4 219 4.75E-86 T 17-10-2018 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 2.5E-47 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 2.5E-47 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 2.5E-47 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 2.5E-47 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 2.5E-47 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 PIRSF PIRSF001438 1 310 4.9E-121 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 17-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 Gene3D G3DSA:3.40.190.10 6 216 1.2E-84 T 17-10-2018 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 SUPERFAMILY SSF54782 220 309 3.14E-28 T 17-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0099 2246cb29b98d264b30d652f17c344cf9 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 8.9E-114 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0023 bd8f41471802bac43e685c56cb0cb1f2 328 Gene3D G3DSA:1.10.510.10 60 258 1.5E-123 T 17-10-2018 FORC55_0023 bd8f41471802bac43e685c56cb0cb1f2 328 SUPERFAMILY SSF56112 6 328 3.35E-90 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily FORC55_0023 bd8f41471802bac43e685c56cb0cb1f2 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 47.158 T 17-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 FORC55_0023 bd8f41471802bac43e685c56cb0cb1f2 328 Gene3D G3DSA:1.20.1270.170 149 307 1.5E-123 T 17-10-2018 FORC55_0023 bd8f41471802bac43e685c56cb0cb1f2 328 Gene3D G3DSA:3.30.200.70 13 108 1.5E-123 T 17-10-2018 FORC55_0023 bd8f41471802bac43e685c56cb0cb1f2 328 Pfam PF01636 Phosphotransferase enzyme family 35 262 5.3E-42 T 17-10-2018 IPR002575 Aminoglycoside phosphotransferase FORC55_3201 270a8eb6ec6fb3f9d5964f9249a00ab3 294 Pfam PF11060 Protein of unknown function (DUF2861) 26 289 4.9E-94 T 17-10-2018 IPR021290 Protein of unknown function DUF2861 FORC55_0788 1948c364c7effc19e63124fd5a0f24cb 207 Gene3D G3DSA:3.40.50.300 1 197 1.8E-42 T 17-10-2018 FORC55_0788 1948c364c7effc19e63124fd5a0f24cb 207 SMART SM00382 26 207 1.3E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0788 1948c364c7effc19e63124fd5a0f24cb 207 SUPERFAMILY SSF52540 2 194 5.78E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0788 1948c364c7effc19e63124fd5a0f24cb 207 Pfam PF00005 ABC transporter 18 158 5.7E-29 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0788 1948c364c7effc19e63124fd5a0f24cb 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 5.0E-79 T 17-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 FORC55_0788 1948c364c7effc19e63124fd5a0f24cb 207 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2525 ee096cc983678fb94a42957c7c89f588 344 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 1.1E-102 T 17-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain FORC55_2525 ee096cc983678fb94a42957c7c89f588 344 Gene3D G3DSA:3.90.25.30 166 322 5.4E-132 T 17-10-2018 FORC55_2525 ee096cc983678fb94a42957c7c89f588 344 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 332 2.9E-24 T 17-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 FORC55_2525 ee096cc983678fb94a42957c7c89f588 344 SUPERFAMILY SSF51735 1 261 5.37E-54 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2525 ee096cc983678fb94a42957c7c89f588 344 Gene3D G3DSA:3.40.50.720 4 309 5.4E-132 T 17-10-2018 FORC55_0861 1738993adb84ca5fa3a8b75c8378ebee 194 SMART SM00471 26 151 2.8E-8 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_0861 1738993adb84ca5fa3a8b75c8378ebee 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 46.896 T 17-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 FORC55_0861 1738993adb84ca5fa3a8b75c8378ebee 194 SUPERFAMILY SSF109604 4 193 5.71E-43 T 17-10-2018 FORC55_0861 1738993adb84ca5fa3a8b75c8378ebee 194 Gene3D G3DSA:1.10.3210.10 1 194 3.7E-83 T 17-10-2018 FORC55_0861 1738993adb84ca5fa3a8b75c8378ebee 194 Pfam PF13023 HD domain 11 165 8.2E-16 T 17-10-2018 IPR006674 HD domain FORC55_0861 1738993adb84ca5fa3a8b75c8378ebee 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 184 2.0E-46 T 17-10-2018 FORC55_2014 28af90130328b6b2d4e1ab4330de3bfa 273 Gene3D G3DSA:3.40.50.300 25 270 7.5E-67 T 17-10-2018 FORC55_2014 28af90130328b6b2d4e1ab4330de3bfa 273 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 27 273 3.5E-122 T 17-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 FORC55_2014 28af90130328b6b2d4e1ab4330de3bfa 273 Pfam PF00005 ABC transporter 42 198 2.2E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2014 28af90130328b6b2d4e1ab4330de3bfa 273 SMART SM00382 51 254 6.5E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2014 28af90130328b6b2d4e1ab4330de3bfa 273 SUPERFAMILY SSF52540 23 259 1.69E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2014 28af90130328b6b2d4e1ab4330de3bfa 273 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2308 97cf583eefe0698e49ca2b6d8566adb1 358 SUPERFAMILY SSF51569 4 356 2.38E-131 T 17-10-2018 FORC55_2308 97cf583eefe0698e49ca2b6d8566adb1 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 5.2E-181 T 17-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 FORC55_2308 97cf583eefe0698e49ca2b6d8566adb1 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 1.6E-111 T 17-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 FORC55_2308 97cf583eefe0698e49ca2b6d8566adb1 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 17-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 FORC55_2308 97cf583eefe0698e49ca2b6d8566adb1 358 PIRSF PIRSF001359 13 358 8.8E-95 T 17-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 FORC55_2308 97cf583eefe0698e49ca2b6d8566adb1 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 17-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 FORC55_2308 97cf583eefe0698e49ca2b6d8566adb1 358 Gene3D G3DSA:3.20.20.70 2 358 7.8E-148 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2308 97cf583eefe0698e49ca2b6d8566adb1 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 5.1E-91 T 17-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 FORC55_2487 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2487 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 FORC55_2487 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 FORC55_2487 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 FORC55_2487 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 FORC55_2487 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 FORC55_2487 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.4E-44 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 FORC55_2487 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2487 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2487 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2487 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 17-10-2018 FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 Gene3D G3DSA:3.30.230.10 2 160 1.9E-51 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 3.0E-94 T 17-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 2.1E-8 T 17-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 PIRSF PIRSF010376 4 280 1.4E-86 T 17-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 Pfam PF08544 GHMP kinases C terminal 205 259 2.5E-6 T 17-10-2018 IPR013750 GHMP kinase, C-terminal domain FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 SUPERFAMILY SSF54211 6 157 4.02E-43 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 SUPERFAMILY SSF55060 162 278 2.25E-36 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 272 31.319 T 17-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 FORC55_0672 06a627ded85c51e14e98c6c036cedf02 290 Gene3D G3DSA:3.30.70.890 162 280 2.2E-28 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily FORC55_3488 67fcb109507ade852e4518fcb36f5df9 417 Gene3D G3DSA:1.10.3210.10 257 389 8.7E-30 T 17-10-2018 FORC55_3488 67fcb109507ade852e4518fcb36f5df9 417 Gene3D G3DSA:1.10.3210.10 17 183 1.2E-21 T 17-10-2018 FORC55_3488 67fcb109507ade852e4518fcb36f5df9 417 SMART SM00471 39 348 0.0016 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_3488 67fcb109507ade852e4518fcb36f5df9 417 Pfam PF13487 HD domain 265 330 3.6E-23 T 17-10-2018 FORC55_3488 67fcb109507ade852e4518fcb36f5df9 417 SUPERFAMILY SSF109604 34 116 1.95E-8 T 17-10-2018 FORC55_3488 67fcb109507ade852e4518fcb36f5df9 417 SUPERFAMILY SSF109604 262 377 4.08E-10 T 17-10-2018 FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 Gene3D G3DSA:3.10.20.30 1 106 7.4E-35 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 9.1E-94 T 17-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 SUPERFAMILY SSF46548 107 226 9.77E-31 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 3.3E-33 T 17-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.3E-11 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 Gene3D G3DSA:1.10.1060.10 107 244 6.8E-50 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_0231 4c013f3be89d511b0d7ad1d2b60da4f2 252 SUPERFAMILY SSF54292 5 106 5.51E-29 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 Gene3D G3DSA:1.20.81.30 257 369 1.1E-25 T 17-10-2018 FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 6.7E-160 T 17-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 17-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.2E-38 T 17-10-2018 IPR003004 GspF/PilC family FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.2E-38 T 17-10-2018 IPR003004 GspF/PilC family FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.2E-38 T 17-10-2018 IPR003004 GspF/PilC family FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.2E-38 T 17-10-2018 IPR003004 GspF/PilC family FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 2.0E-34 T 17-10-2018 IPR018076 Type II secretion system F domain FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 4.6E-25 T 17-10-2018 IPR018076 Type II secretion system F domain FORC55_0154 92c3b04b5aed5e463dd732c1eed092d1 406 Gene3D G3DSA:1.20.81.30 55 173 1.9E-39 T 17-10-2018 FORC55_2093 99f80bbb8c21d58920aa1ef47f8e32af 302 TIGRFAM TIGR02740 TraF-like: TraF-like protein 2 258 2.9E-110 T 17-10-2018 IPR014111 Type IV conjugative transfer system protein TraF-like FORC55_2093 99f80bbb8c21d58920aa1ef47f8e32af 302 SUPERFAMILY SSF52833 144 247 1.36E-12 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_2093 99f80bbb8c21d58920aa1ef47f8e32af 302 Gene3D G3DSA:3.40.30.10 149 247 4.9E-8 T 17-10-2018 FORC55_2093 99f80bbb8c21d58920aa1ef47f8e32af 302 Pfam PF13728 F plasmid transfer operon protein 29 248 5.3E-77 T 17-10-2018 IPR039555 F plasmid transfer operon protein FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 SUPERFAMILY SSF51905 15 392 6.2E-53 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 Pfam PF01494 FAD binding domain 15 348 1.8E-23 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 16 398 2.2E-162 T 17-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 16 397 2.1E-123 T 17-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 306 319 - T 17-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 307 2.3E-10 T 17-10-2018 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 168 183 2.3E-10 T 17-10-2018 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 2.3E-10 T 17-10-2018 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 323 2.3E-10 T 17-10-2018 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 Gene3D G3DSA:3.30.9.50 92 281 1.2E-95 T 17-10-2018 FORC55_0401 25eadd40b67ffcee63b3c247b7b0f026 402 Gene3D G3DSA:3.50.50.60 16 346 1.2E-95 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2696 f5588baecb4d80f38e61db4d6d46ce48 239 Gene3D G3DSA:1.10.10.200 17 78 8.9E-18 T 17-10-2018 IPR017856 Integrase-like, N-terminal FORC55_2696 f5588baecb4d80f38e61db4d6d46ce48 239 Pfam PF01709 Transcriptional regulator 5 236 1.2E-74 T 17-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_2696 f5588baecb4d80f38e61db4d6d46ce48 239 Gene3D G3DSA:3.30.70.980 131 202 9.1E-46 T 17-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_2696 f5588baecb4d80f38e61db4d6d46ce48 239 SUPERFAMILY SSF75625 1 238 2.22E-77 T 17-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_2696 f5588baecb4d80f38e61db4d6d46ce48 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 28.604 T 17-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_2696 f5588baecb4d80f38e61db4d6d46ce48 239 Gene3D G3DSA:3.30.70.980 83 235 9.1E-46 T 17-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_1586 fa848736ae01f167e62434710a6a020f 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 2.0E-20 T 17-10-2018 FORC55_1586 fa848736ae01f167e62434710a6a020f 153 Pfam PF04191 Phospholipid methyltransferase 44 142 1.8E-10 T 17-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 FORC55_1586 fa848736ae01f167e62434710a6a020f 153 Gene3D G3DSA:1.20.120.1630 3 153 6.7E-22 T 17-10-2018 FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 SMART SM00267 399 575 4.6E-72 T 17-10-2018 IPR000160 GGDEF domain FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 SMART SM00091 36 100 48.0 T 17-10-2018 IPR000014 PAS domain FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 SMART SM00091 277 344 0.0025 T 17-10-2018 IPR000014 PAS domain FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 Gene3D G3DSA:3.30.70.270 412 579 7.7E-52 T 17-10-2018 FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 SUPERFAMILY SSF55785 264 390 2.62E-20 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 571 1.8E-49 T 17-10-2018 IPR000160 GGDEF domain FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 Pfam PF08448 PAS fold 283 393 5.6E-17 T 17-10-2018 IPR013656 PAS fold-4 FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 SMART SM00086 209 251 480.0 T 17-10-2018 IPR001610 PAC motif FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 SMART SM00086 350 392 0.0048 T 17-10-2018 IPR001610 PAC motif FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 Pfam PF13188 PAS domain 40 72 0.0042 T 17-10-2018 IPR000014 PAS domain FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 SUPERFAMILY SSF55785 149 249 5.93E-7 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 399 3.8E-15 T 17-10-2018 IPR000014 PAS domain FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 Gene3D G3DSA:3.30.450.20 262 406 3.4E-25 T 17-10-2018 FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 573 1.8E-47 T 17-10-2018 IPR000160 GGDEF domain FORC55_0502 bfb788651798f51e4a75c09f2a05915a 579 SUPERFAMILY SSF55073 415 577 2.12E-46 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 2.5E-27 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 17-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 SUPERFAMILY SSF52540 159 545 5.58E-101 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 SMART SM01086 766 855 1.3E-37 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Gene3D G3DSA:1.10.1780.10 1 148 3.9E-32 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 17-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Gene3D G3DSA:1.10.8.60 766 857 7.4E-27 T 17-10-2018 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 3.7E-57 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 2.8E-13 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 SMART SM00382 198 344 1.4E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 SMART SM00382 597 748 3.7E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 17-10-2018 IPR028299 ClpA/B, conserved site 2 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 SUPERFAMILY SSF52540 546 850 4.27E-84 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 SUPERFAMILY SSF81923 4 156 1.86E-41 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Gene3D G3DSA:3.40.50.300 158 347 3.6E-75 T 17-10-2018 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.4E-13 T 17-10-2018 IPR004176 Clp, N-terminal FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.2E-12 T 17-10-2018 IPR004176 Clp, N-terminal FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Gene3D G3DSA:3.40.50.300 550 764 5.4E-90 T 17-10-2018 FORC55_2028 3f938944f82a70c20dd91e85538a179c 857 Gene3D G3DSA:3.40.50.300 348 544 2.5E-66 T 17-10-2018 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 SUPERFAMILY SSF58104 246 539 1.83E-66 T 17-10-2018 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 1.0E-27 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.0E-27 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.0E-27 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.0E-27 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 Gene3D G3DSA:3.30.450.20 33 186 3.5E-31 T 17-10-2018 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 SMART SM01049 30 124 3.1E-19 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 503 1.6E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 Pfam PF17200 Single Cache domain 2 36 185 8.2E-35 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 SMART SM00283 277 538 1.5E-63 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2340 0dd629c7f60b7d915994725f488b9132 541 Gene3D G3DSA:1.10.287.950 217 540 3.1E-62 T 17-10-2018 FORC55_3682 85c5a74f37951caf503cadf790610a8a 227 SMART SM01236 74 175 5.9E-6 T 17-10-2018 FORC55_3682 85c5a74f37951caf503cadf790610a8a 227 SUPERFAMILY SSF48613 2 218 8.76E-62 T 17-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 FORC55_3682 85c5a74f37951caf503cadf790610a8a 227 Pfam PF14518 Iron-containing redox enzyme 40 208 1.5E-23 T 17-10-2018 FORC55_3682 85c5a74f37951caf503cadf790610a8a 227 Gene3D G3DSA:1.20.910.10 4 227 8.5E-59 T 17-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 FORC55_2258 13f6939378b0a8ec1b5de8f90b198181 426 SUPERFAMILY SSF56176 340 421 4.36E-20 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 FORC55_2258 13f6939378b0a8ec1b5de8f90b198181 426 SMART SM01091 342 420 7.3E-23 T 17-10-2018 IPR005170 Transporter-associated domain FORC55_2258 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF03471 Transporter associated domain 344 419 9.1E-17 T 17-10-2018 IPR005170 Transporter-associated domain FORC55_2258 13f6939378b0a8ec1b5de8f90b198181 426 Gene3D G3DSA:3.10.580.10 201 330 2.7E-39 T 17-10-2018 FORC55_2258 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF00571 CBS domain 278 326 6.4E-4 T 17-10-2018 IPR000644 CBS domain FORC55_2258 13f6939378b0a8ec1b5de8f90b198181 426 SUPERFAMILY SSF54631 192 329 1.06E-23 T 17-10-2018 FORC55_2258 13f6939378b0a8ec1b5de8f90b198181 426 Gene3D G3DSA:3.30.465.10 340 418 7.8E-27 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 FORC55_2258 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF01595 Domain of unknown function DUF21 13 181 1.4E-49 T 17-10-2018 IPR002550 CNNM, transmembrane domain FORC55_1703 d518dcc32a9d02e5463fe8ab390849dd 329 SUPERFAMILY SSF55821 18 215 7.02E-62 T 17-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily FORC55_1703 d518dcc32a9d02e5463fe8ab390849dd 329 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 20 213 1.5E-57 T 17-10-2018 IPR006070 YrdC-like domain GO:0003725 FORC55_1703 d518dcc32a9d02e5463fe8ab390849dd 329 Pfam PF01300 Telomere recombination 28 203 1.2E-56 T 17-10-2018 IPR006070 YrdC-like domain GO:0003725 FORC55_1703 d518dcc32a9d02e5463fe8ab390849dd 329 PIRSF PIRSF004930 7 329 1.2E-105 T 17-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 FORC55_1703 d518dcc32a9d02e5463fe8ab390849dd 329 Gene3D G3DSA:3.40.50.11030 219 329 3.4E-11 T 17-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily FORC55_1703 d518dcc32a9d02e5463fe8ab390849dd 329 Gene3D G3DSA:3.90.870.10 10 218 4.0E-77 T 17-10-2018 FORC55_1703 d518dcc32a9d02e5463fe8ab390849dd 329 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 329 1.7E-17 T 17-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 PRINTS PR00084 Mannitol dehydrogenase signature 152 165 7.9E-18 T 17-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 PRINTS PR00084 Mannitol dehydrogenase signature 116 129 7.9E-18 T 17-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 PRINTS PR00084 Mannitol dehydrogenase signature 172 187 7.9E-18 T 17-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 PRINTS PR00084 Mannitol dehydrogenase signature 5 15 7.9E-18 T 17-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 3 380 42.153 T 17-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 SUPERFAMILY SSF51735 2 204 7.32E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 152 371 9.6E-59 T 17-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 SUPERFAMILY SSF48179 206 383 4.76E-45 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 Gene3D G3DSA:1.10.1040.10 209 384 7.5E-66 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 4 125 4.7E-24 T 17-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 Gene3D G3DSA:3.40.50.720 3 207 3.4E-77 T 17-10-2018 FORC55_3621 7457915871595c19b0372bdf0f9aff98 384 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 152 164 - T 17-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 FORC55_2604 951c18ad80660112f5cf02270370bcaf 282 Gene3D G3DSA:3.40.50.10490 97 276 8.8E-40 T 17-10-2018 FORC55_2604 951c18ad80660112f5cf02270370bcaf 282 SUPERFAMILY SSF53697 99 279 2.88E-37 T 17-10-2018 FORC55_2604 951c18ad80660112f5cf02270370bcaf 282 Pfam PF01380 SIS domain 130 256 2.4E-17 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_2604 951c18ad80660112f5cf02270370bcaf 282 SUPERFAMILY SSF46689 1 78 3.4E-19 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2604 951c18ad80660112f5cf02270370bcaf 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 1.6E-21 T 17-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 FORC55_2604 951c18ad80660112f5cf02270370bcaf 282 Gene3D G3DSA:1.10.10.10 1 80 1.1E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 SMART SM00267 198 368 6.6E-7 T 17-10-2018 IPR000160 GGDEF domain FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 363 5.0E-16 T 17-10-2018 IPR000160 GGDEF domain FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 SUPERFAMILY SSF141868 388 619 4.32E-41 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 Gene3D G3DSA:3.20.20.450 379 625 4.8E-41 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 SUPERFAMILY SSF55073 215 369 6.83E-14 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 Gene3D G3DSA:3.30.70.270 193 369 1.1E-17 T 17-10-2018 FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 21 116 2.1E-30 T 17-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 SMART SM00052 379 631 3.8E-18 T 17-10-2018 IPR001633 EAL domain FORC55_2391 87b386d8c0e17d7c168b5b059a596229 652 Pfam PF00563 EAL domain 411 618 8.6E-45 T 17-10-2018 IPR001633 EAL domain FORC55_3396 634d56a2a5c4073b4b9b505429c031bc 335 SUPERFAMILY SSF53383 1 333 1.46E-118 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3396 634d56a2a5c4073b4b9b505429c031bc 335 Gene3D G3DSA:3.40.640.10 1 243 6.5E-99 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3396 634d56a2a5c4073b4b9b505429c031bc 335 PIRSF PIRSF017617 1 335 2.5E-135 T 17-10-2018 IPR023603 Threonine aldolase FORC55_3396 634d56a2a5c4073b4b9b505429c031bc 335 Gene3D G3DSA:3.90.1150.10 244 335 7.0E-23 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3396 634d56a2a5c4073b4b9b505429c031bc 335 Pfam PF01212 Beta-eliminating lyase 2 283 1.2E-99 T 17-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 FORC55_2232 fa8f3a2c115e3cd32562dcb18d3913e3 222 SMART SM00947 30 192 7.5E-67 T 17-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 FORC55_2232 fa8f3a2c115e3cd32562dcb18d3913e3 222 Pfam PF00484 Carbonic anhydrase 38 188 1.7E-50 T 17-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 FORC55_2232 fa8f3a2c115e3cd32562dcb18d3913e3 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 17-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 FORC55_2232 fa8f3a2c115e3cd32562dcb18d3913e3 222 Gene3D G3DSA:3.40.1050.10 1 222 3.1E-94 T 17-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 FORC55_2232 fa8f3a2c115e3cd32562dcb18d3913e3 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 17-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 FORC55_2232 fa8f3a2c115e3cd32562dcb18d3913e3 222 SUPERFAMILY SSF53056 2 214 3.4E-75 T 17-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 FORC55_1018 d172e88da2494c526ce7d8cea2177e8d 542 Pfam PF02470 MlaD protein 44 134 4.1E-9 T 17-10-2018 IPR003399 Mce/MlaD FORC55_1018 d172e88da2494c526ce7d8cea2177e8d 542 Pfam PF02470 MlaD protein 163 216 4.0E-7 T 17-10-2018 IPR003399 Mce/MlaD FORC55_1018 d172e88da2494c526ce7d8cea2177e8d 542 Pfam PF02470 MlaD protein 287 391 1.8E-16 T 17-10-2018 IPR003399 Mce/MlaD FORC55_2574 862b7a5532eae604c782c9fa0f61c529 418 Gene3D G3DSA:1.10.150.130 93 200 2.9E-34 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal FORC55_2574 862b7a5532eae604c782c9fa0f61c529 418 Gene3D G3DSA:1.10.443.10 201 400 9.6E-17 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 FORC55_2574 862b7a5532eae604c782c9fa0f61c529 418 SUPERFAMILY SSF56349 98 394 3.24E-48 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 FORC55_2574 862b7a5532eae604c782c9fa0f61c529 418 Pfam PF00589 Phage integrase family 223 381 3.6E-12 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 FORC55_2574 862b7a5532eae604c782c9fa0f61c529 418 Pfam PF13356 Arm DNA-binding domain 4 87 5.8E-16 T 17-10-2018 IPR025166 Integrase, DNA-binding domain FORC55_2574 862b7a5532eae604c782c9fa0f61c529 418 Gene3D G3DSA:3.30.160.390 2 88 2.0E-17 T 17-10-2018 IPR038488 Integrase, DNA-binding domain superfamily FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 116 1.7E-10 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00970 Oxidoreductase FAD-binding domain 205 267 1.4E-8 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 PIRSF PIRSF000044 1 408 1.1E-219 T 17-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 62.443 T 17-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 386 2.5E-17 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 1.4E-228 T 17-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF63380 106 273 8.42E-35 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF52343 259 403 6.55E-36 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:3.40.50.80 276 394 9.0E-32 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:2.40.30.10 127 265 2.0E-51 T 17-10-2018 FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:3.10.20.30 35 126 2.9E-33 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_0572 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF54292 38 125 6.56E-21 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 SUPERFAMILY SSF52794 2 101 1.74E-28 T 17-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 86 7.1E-14 T 17-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 126 209 7.3E-16 T 17-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 Gene3D G3DSA:3.40.50.2300 1 103 1.2E-24 T 17-10-2018 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 SUPERFAMILY SSF52794 123 223 2.96E-36 T 17-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 229 568 5.9E-143 T 17-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 Gene3D G3DSA:3.40.50.2300 115 223 9.3E-40 T 17-10-2018 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 125 208 3.0E-37 T 17-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 FORC55_3154 2c643b7eaf50b7d194dc859e3aa8faea 578 Pfam PF02378 Phosphotransferase system, EIIC 249 512 3.1E-18 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_2711 440e62d76435cf4458d0931663326bb0 318 Pfam PF03547 Membrane transport protein 169 307 1.9E-12 T 17-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 FORC55_2690 611affea06a20f908eb01a8c272781e1 323 Gene3D G3DSA:1.10.10.2830 153 271 3.9E-16 T 17-10-2018 FORC55_2690 611affea06a20f908eb01a8c272781e1 323 Pfam PF02195 ParB-like nuclease domain 73 145 2.8E-8 T 17-10-2018 IPR003115 ParB/Sulfiredoxin FORC55_2690 611affea06a20f908eb01a8c272781e1 323 SUPERFAMILY SSF110849 74 150 1.62E-8 T 17-10-2018 IPR036086 ParB/Sulfiredoxin superfamily FORC55_2690 611affea06a20f908eb01a8c272781e1 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 68 232 4.0E-23 T 17-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 FORC55_2690 611affea06a20f908eb01a8c272781e1 323 SMART SM00470 53 149 1.3E-6 T 17-10-2018 IPR003115 ParB/Sulfiredoxin FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 SUPERFAMILY SSF53335 400 706 1.88E-69 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 Gene3D G3DSA:3.30.2130.30 6 255 1.9E-134 T 17-10-2018 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 SUPERFAMILY SSF53335 139 371 2.05E-38 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 17-10-2018 IPR000241 Putative RNA methylase domain FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 707 31.458 T 17-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 Pfam PF02926 THUMP domain 31 153 1.5E-7 T 17-10-2018 IPR004114 THUMP domain GO:0003723 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 Gene3D G3DSA:3.30.750.80 397 488 2.1E-36 T 17-10-2018 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 Gene3D G3DSA:3.40.50.150 489 707 3.2E-75 T 17-10-2018 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 435 663 3.9E-26 T 17-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 SMART SM00981 56 154 7.6E-14 T 17-10-2018 IPR004114 THUMP domain GO:0003723 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 2.1E-60 T 17-10-2018 IPR000241 Putative RNA methylase domain FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 PIRSF PIRSF037618 1 708 1.5E-297 T 17-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 FORC55_1333 35aa5af8ffffa6ab244f3fc923e5e9fd 708 Gene3D G3DSA:3.40.50.150 169 371 1.9E-134 T 17-10-2018 FORC55_2397 76587b44b2fc33b861862dd0ac7ee459 372 Pfam PF00266 Aminotransferase class-V 13 340 3.5E-37 T 17-10-2018 IPR000192 Aminotransferase class V domain FORC55_2397 76587b44b2fc33b861862dd0ac7ee459 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 17-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site FORC55_2397 76587b44b2fc33b861862dd0ac7ee459 372 Gene3D G3DSA:3.40.640.10 22 269 2.8E-143 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2397 76587b44b2fc33b861862dd0ac7ee459 372 Gene3D G3DSA:3.90.1150.10 9 371 2.8E-143 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_2397 76587b44b2fc33b861862dd0ac7ee459 372 SUPERFAMILY SSF53383 9 371 4.95E-103 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2397 76587b44b2fc33b861862dd0ac7ee459 372 PIRSF PIRSF000524 5 372 1.0E-108 T 17-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 FORC55_2812 298374c06ac3b044255c5bb09188e92c 171 Pfam PF04973 Nicotinamide mononucleotide transporter 25 115 2.2E-26 T 17-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 FORC55_2812 298374c06ac3b044255c5bb09188e92c 171 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 111 5.6E-29 T 17-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 FORC55_1706 71a53b5cbbfb28ebdb0dcdfb2ea9535a 180 Pfam PF01161 Phosphatidylethanolamine-binding protein 40 177 6.0E-36 T 17-10-2018 IPR008914 Phosphatidylethanolamine-binding protein FORC55_1706 71a53b5cbbfb28ebdb0dcdfb2ea9535a 180 SUPERFAMILY SSF49777 23 179 9.42E-50 T 17-10-2018 IPR036610 PEBP-like superfamily FORC55_1706 71a53b5cbbfb28ebdb0dcdfb2ea9535a 180 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 177 2.9E-37 T 17-10-2018 IPR005247 YbhB/YbcL FORC55_1706 71a53b5cbbfb28ebdb0dcdfb2ea9535a 180 Gene3D G3DSA:3.90.280.10 15 179 4.5E-52 T 17-10-2018 IPR036610 PEBP-like superfamily FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 SUPERFAMILY SSF55785 7 105 3.21E-12 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 SUPERFAMILY SSF55785 123 230 1.68E-25 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 108 1.9E-7 T 17-10-2018 IPR000014 PAS domain FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 124 234 1.2E-15 T 17-10-2018 IPR000014 PAS domain FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 Gene3D G3DSA:1.10.287.950 230 529 5.6E-83 T 17-10-2018 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 SMART SM00086 66 107 32.0 T 17-10-2018 IPR001610 PAC motif FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 SMART SM00086 187 229 0.025 T 17-10-2018 IPR001610 PAC motif FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 Gene3D G3DSA:3.30.450.20 121 227 1.3E-20 T 17-10-2018 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 SUPERFAMILY SSF58104 247 528 3.14E-72 T 17-10-2018 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 Pfam PF08448 PAS fold 7 108 1.8E-12 T 17-10-2018 IPR013656 PAS fold-4 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 Pfam PF08447 PAS fold 137 222 8.2E-15 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 495 2.9E-52 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 3.7E-54 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 3.7E-54 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 3.7E-54 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 455 484 3.7E-54 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 SMART SM00283 280 527 1.0E-82 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 Gene3D G3DSA:3.30.450.20 8 113 1.4E-14 T 17-10-2018 FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 SMART SM00091 3 61 48.0 T 17-10-2018 IPR000014 PAS domain FORC55_0083 a660d36b8935c6a0645ee58f75d79cb3 589 SMART SM00091 114 182 0.0077 T 17-10-2018 IPR000014 PAS domain FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 199 3.2E-11 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 SUPERFAMILY SSF56784 10 236 2.45E-40 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 Gene3D G3DSA:1.20.120.1600 24 110 1.3E-60 T 17-10-2018 FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 2.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 2.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 4.1E-15 T 17-10-2018 FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 206 1.6E-7 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_0106 c1ab119a9b420294a7ce380702ca157b 239 Gene3D G3DSA:3.40.50.1000 12 232 1.3E-60 T 17-10-2018 IPR023214 HAD superfamily FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 SMART SM00052 461 708 4.0E-73 T 17-10-2018 IPR001633 EAL domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 Pfam PF13426 PAS domain 177 276 1.8E-12 T 17-10-2018 IPR000014 PAS domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 SMART SM00267 277 449 4.3E-42 T 17-10-2018 IPR000160 GGDEF domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 163 283 3.6E-15 T 17-10-2018 IPR000014 PAS domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 Pfam PF00563 EAL domain 469 703 5.5E-61 T 17-10-2018 IPR001633 EAL domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 SUPERFAMILY SSF55785 32 152 1.08E-7 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 Gene3D G3DSA:3.20.20.450 450 711 8.7E-80 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 447 3.0E-30 T 17-10-2018 IPR000160 GGDEF domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 Gene3D G3DSA:3.30.450.20 166 278 1.7E-18 T 17-10-2018 FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 SUPERFAMILY SSF141868 467 711 6.41E-72 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 SUPERFAMILY SSF55073 293 450 6.67E-38 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 445 6.2E-33 T 17-10-2018 IPR000160 GGDEF domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 SUPERFAMILY SSF55785 151 275 5.63E-20 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 SMART SM00091 43 110 5.9 T 17-10-2018 IPR000014 PAS domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 SMART SM00091 166 232 1.4E-4 T 17-10-2018 IPR000014 PAS domain FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 Gene3D G3DSA:3.30.70.270 279 449 8.7E-43 T 17-10-2018 FORC55_0057 e7b09de9d8a3721c1aec83c2a3dbffb6 718 Gene3D G3DSA:3.30.450.20 31 165 1.3E-8 T 17-10-2018 FORC55_2796 88d946860e1d0005a3ad01d3ac3985d8 1166 Pfam PF14331 ImcF-related N-terminal domain 188 445 6.4E-78 T 17-10-2018 IPR025743 ImcF-related, N-terminal domain FORC55_2796 88d946860e1d0005a3ad01d3ac3985d8 1166 Gene3D G3DSA:3.40.50.300 115 307 4.0E-5 T 17-10-2018 FORC55_2796 88d946860e1d0005a3ad01d3ac3985d8 1166 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 10 1162 0.0 T 17-10-2018 IPR017731 Type VI secretion system, IcmF FORC55_2796 88d946860e1d0005a3ad01d3ac3985d8 1166 SUPERFAMILY SSF52540 105 305 1.27E-7 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2796 88d946860e1d0005a3ad01d3ac3985d8 1166 Pfam PF06744 Type VI secretion protein IcmF C-terminal 916 1114 1.3E-59 T 17-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal FORC55_2796 88d946860e1d0005a3ad01d3ac3985d8 1166 Pfam PF06761 Intracellular multiplication and human macrophage-killing 495 809 4.2E-75 T 17-10-2018 IPR009612 ImcF-related FORC55_1852 771b8c5b4d24577e6907ccb26bbb9687 382 SUPERFAMILY SSF53756 20 381 3.1E-49 T 17-10-2018 FORC55_1852 771b8c5b4d24577e6907ccb26bbb9687 382 Gene3D G3DSA:3.40.50.2000 204 368 8.1E-25 T 17-10-2018 FORC55_1852 771b8c5b4d24577e6907ccb26bbb9687 382 Pfam PF13439 Glycosyltransferase Family 4 21 189 9.0E-12 T 17-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 FORC55_1852 771b8c5b4d24577e6907ccb26bbb9687 382 Gene3D G3DSA:3.40.50.2000 3 203 4.3E-14 T 17-10-2018 FORC55_1852 771b8c5b4d24577e6907ccb26bbb9687 382 Pfam PF00534 Glycosyl transferases group 1 200 348 4.1E-24 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 Gene3D G3DSA:3.30.450.40 4 188 1.8E-47 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 SUPERFAMILY SSF52540 284 520 2.52E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 Gene3D G3DSA:1.10.10.60 540 586 6.2E-9 T 17-10-2018 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 Pfam PF01590 GAF domain 83 183 1.8E-9 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 Gene3D G3DSA:3.40.50.300 264 452 4.8E-54 T 17-10-2018 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 1.8E-5 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 1.8E-5 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 Gene3D G3DSA:1.10.8.60 453 527 4.5E-11 T 17-10-2018 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 Pfam PF02954 Bacterial regulatory protein, Fis family 555 581 1.4E-8 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 Pfam PF00158 Sigma-54 interaction domain 284 445 2.3E-59 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 SUPERFAMILY SSF46689 489 584 1.08E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1008 b5a02878061962c944c5242b473b6ed3 586 SMART SM00382 300 444 1.9E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0139 32f9b913cc5838e71219a04fb8934caa 196 Pfam PF13511 Domain of unknown function (DUF4124) 13 60 3.5E-11 T 17-10-2018 IPR025392 Domain of unknown function DUF4124 FORC55_1576 c2b5a5aba5e943063b9bef176f4ca5f8 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 35.776 T 17-10-2018 IPR007376 dsDNA mimic, putative FORC55_1576 c2b5a5aba5e943063b9bef176f4ca5f8 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-38 T 17-10-2018 IPR007376 dsDNA mimic, putative FORC55_1576 c2b5a5aba5e943063b9bef176f4ca5f8 106 SUPERFAMILY SSF102816 3 105 3.01E-47 T 17-10-2018 IPR036763 Putative dsDNA mimic superfamily FORC55_1576 c2b5a5aba5e943063b9bef176f4ca5f8 106 Gene3D G3DSA:3.10.450.140 5 105 4.1E-41 T 17-10-2018 IPR036763 Putative dsDNA mimic superfamily FORC55_1576 c2b5a5aba5e943063b9bef176f4ca5f8 106 Pfam PF04269 Protein of unknown function, DUF440 6 105 1.1E-44 T 17-10-2018 IPR007376 dsDNA mimic, putative FORC55_1576 c2b5a5aba5e943063b9bef176f4ca5f8 106 PIRSF PIRSF004916 1 105 1.7E-53 T 17-10-2018 IPR007376 dsDNA mimic, putative FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 SUPERFAMILY SSF53335 138 424 6.08E-81 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 Gene3D G3DSA:3.30.70.1170 170 227 8.9E-28 T 17-10-2018 FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 17-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 Gene3D G3DSA:3.40.50.150 228 425 3.0E-72 T 17-10-2018 FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 Pfam PF01029 NusB family 1 123 5.5E-23 T 17-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 SUPERFAMILY SSF48013 1 146 3.27E-34 T 17-10-2018 IPR035926 NusB-like superfamily FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 Gene3D G3DSA:1.10.287.730 143 169 1.4E-11 T 17-10-2018 FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 Gene3D G3DSA:1.10.940.10 1 142 3.6E-43 T 17-10-2018 IPR035926 NusB-like superfamily FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 5.6E-31 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 5.6E-31 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 5.6E-31 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 5.6E-31 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 5.6E-31 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 425 1.2E-155 T 17-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 FORC55_0031 f76e65d52c6ee471071ddf163f8d0124 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 422 5.2E-70 T 17-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 FORC55_0723 da1dcb0f29c562b11b756538802a414e 667 Gene3D G3DSA:3.30.750.140 517 630 2.3E-35 T 17-10-2018 IPR038610 FliK-like, C-terminal domain superfamily FORC55_0723 da1dcb0f29c562b11b756538802a414e 667 PRINTS PR01007 Flagellar hook-length control protein signature 313 330 2.2E-9 T 17-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 FORC55_0723 da1dcb0f29c562b11b756538802a414e 667 PRINTS PR01007 Flagellar hook-length control protein signature 553 571 2.2E-9 T 17-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 FORC55_0723 da1dcb0f29c562b11b756538802a414e 667 PRINTS PR01007 Flagellar hook-length control protein signature 586 609 2.2E-9 T 17-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 FORC55_0723 da1dcb0f29c562b11b756538802a414e 667 Pfam PF02120 Flagellar hook-length control protein FliK 538 621 5.0E-27 T 17-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 Gene3D G3DSA:3.30.70.270 205 375 3.3E-22 T 17-10-2018 FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 SUPERFAMILY SSF141868 376 623 6.54E-82 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 355 5.6E-17 T 17-10-2018 IPR000160 GGDEF domain FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 Pfam PF01590 GAF domain 20 150 1.7E-10 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 SUPERFAMILY SSF55073 209 358 2.28E-15 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 Pfam PF00563 EAL domain 379 611 2.5E-71 T 17-10-2018 IPR001633 EAL domain FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 SMART SM00052 371 616 4.8E-102 T 17-10-2018 IPR001633 EAL domain FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 Gene3D G3DSA:3.20.20.450 376 624 3.0E-86 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 SMART SM00267 192 361 3.9E-8 T 17-10-2018 IPR000160 GGDEF domain FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 SUPERFAMILY SSF55781 16 163 1.13E-23 T 17-10-2018 FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 SMART SM00065 14 161 1.2E-12 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_3414 16bfc613c60c04c4889453ffb1028ac8 627 Gene3D G3DSA:3.30.450.40 11 160 1.3E-16 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 2.6E-193 T 17-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 Gene3D G3DSA:3.40.47.10 261 414 1.6E-54 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 3.6E-37 T 17-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 SUPERFAMILY SSF53901 215 413 1.57E-67 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 5.4E-65 T 17-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 17-10-2018 IPR018201 Beta-ketoacyl synthase, active site FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 Gene3D G3DSA:3.40.47.10 1 255 9.8E-94 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 SMART SM00825 Beta-ketoacyl synthase 6 414 1.2E-16 T 17-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 SUPERFAMILY SSF53901 3 252 5.21E-82 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0824 7f9ac255fed4933473aa313a1756b3eb 414 PIRSF PIRSF000447 1 414 6.4E-207 T 17-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 FORC55_2409 bb22bbb2f87729ce5610af678829ee35 152 SUPERFAMILY SSF46785 10 142 1.6E-34 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2409 bb22bbb2f87729ce5610af678829ee35 152 Gene3D G3DSA:3.30.1490.190 88 149 8.7E-17 T 17-10-2018 FORC55_2409 bb22bbb2f87729ce5610af678829ee35 152 Pfam PF01475 Ferric uptake regulator family 18 136 4.5E-19 T 17-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 FORC55_2409 bb22bbb2f87729ce5610af678829ee35 152 Gene3D G3DSA:1.10.10.10 2 87 7.6E-33 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 SUPERFAMILY SSF53335 76 438 1.6E-81 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 68.889 T 17-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 17-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 100 438 1.3E-32 T 17-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 Gene3D G3DSA:3.40.50.150 89 433 8.7E-118 T 17-10-2018 FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 8.1E-130 T 17-10-2018 FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 SUPERFAMILY SSF50249 17 74 5.54E-14 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 Gene3D G3DSA:3.40.1350.30 135 271 8.7E-118 T 17-10-2018 FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 Gene3D G3DSA:2.40.50.140 1 88 2.1E-28 T 17-10-2018 FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 Pfam PF01938 TRAM domain 17 68 2.1E-9 T 17-10-2018 IPR002792 TRAM domain FORC55_0424 98fa41b1c1ba04e648e2837f661b14f0 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 17-10-2018 IPR030390 RNA methyltransferase TrmA, active site FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 Gene3D G3DSA:2.60.40.10 615 732 6.3E-8 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1078 1093 7.6E-6 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1093 1109 7.6E-6 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 Pfam PF12833 Helix-turn-helix domain 1034 1109 3.7E-24 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 Gene3D G3DSA:3.30.565.10 839 959 2.5E-5 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 SMART SM00342 1027 1109 7.8E-29 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 SUPERFAMILY SSF46689 1063 1110 3.58E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 SUPERFAMILY SSF63829 237 559 1.07E-11 T 17-10-2018 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 Gene3D G3DSA:1.10.10.60 1005 1114 7.5E-30 T 17-10-2018 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 Gene3D G3DSA:2.130.10.10 115 362 2.0E-20 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 SUPERFAMILY SSF82171 47 436 4.71E-7 T 17-10-2018 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 Gene3D G3DSA:2.130.10.10 379 614 2.0E-17 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_0767 cc9e6d9ce48ea9b48322ea43bb1b6817 1114 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1064 1105 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF46565 1 110 1.7E-35 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:2.10.230.10 141 211 1.8E-24 T 17-10-2018 FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF57938 136 212 2.22E-22 T 17-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.4E-139 T 17-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF49493 116 262 9.68E-20 T 17-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF00684 DnaJ central domain 149 209 7.4E-15 T 17-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 17-10-2018 IPR018253 DnaJ domain, conserved site FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 7 25 6.6E-32 T 17-10-2018 IPR001623 DnaJ domain FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 25 40 6.6E-32 T 17-10-2018 IPR001623 DnaJ domain FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 42 62 6.6E-32 T 17-10-2018 IPR001623 DnaJ domain FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 62 81 6.6E-32 T 17-10-2018 IPR001623 DnaJ domain FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF01556 DnaJ C terminal domain 123 335 1.4E-45 T 17-10-2018 IPR002939 Chaperone DnaJ, C-terminal FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 SMART SM00271 4 62 8.0E-31 T 17-10-2018 IPR001623 DnaJ domain FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.597 T 17-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:2.60.260.20 257 365 1.5E-28 T 17-10-2018 FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:1.10.287.110 1 116 1.1E-35 T 17-10-2018 IPR036869 Chaperone J-domain superfamily FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF49493 261 346 3.53E-22 T 17-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 FORC55_1907 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF00226 DnaJ domain 5 67 3.9E-27 T 17-10-2018 IPR001623 DnaJ domain FORC55_2920 d3609e0f5afd1790c1efd8a3cfa60513 135 Gene3D G3DSA:2.10.109.10 14 126 3.1E-30 T 17-10-2018 FORC55_2920 d3609e0f5afd1790c1efd8a3cfa60513 135 SUPERFAMILY SSF51306 21 124 8.37E-22 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily FORC55_2920 d3609e0f5afd1790c1efd8a3cfa60513 135 Pfam PF00717 Peptidase S24-like 47 89 9.4E-6 T 17-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C FORC55_3562 74158d66fcf956e4f136608ebf2c7aea 243 SUPERFAMILY SSF53850 19 240 9.86E-45 T 17-10-2018 FORC55_3562 74158d66fcf956e4f136608ebf2c7aea 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 241 4.7E-35 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3562 74158d66fcf956e4f136608ebf2c7aea 243 Gene3D G3DSA:3.40.190.10 29 240 1.8E-41 T 17-10-2018 FORC55_3562 74158d66fcf956e4f136608ebf2c7aea 243 SMART SM00062 22 243 1.3E-12 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3562 74158d66fcf956e4f136608ebf2c7aea 243 Gene3D G3DSA:3.40.190.10 104 199 1.8E-41 T 17-10-2018 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 SUPERFAMILY SSF51316 236 376 1.05E-59 T 17-10-2018 IPR011057 Mss4-like superfamily FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 237 369 3.8E-61 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 39 198 36.239 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 SUPERFAMILY SSF55068 20 204 3.4E-72 T 17-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 41 191 4.0E-52 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 Pfam PF01625 Peptide methionine sulfoxide reductase 41 192 3.7E-58 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 238 361 35.033 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 Pfam PF01641 SelR domain 242 360 2.2E-46 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 Gene3D G3DSA:3.30.1060.10 20 198 2.3E-64 T 17-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_3259 1580e6b43327d8e88937dbc04593b848 377 Gene3D G3DSA:2.170.150.20 231 377 9.9E-58 T 17-10-2018 FORC55_2236 293beb36fbba5a6e010f9eb19131ae6b 601 Pfam PF04348 LppC putative lipoprotein 39 599 8.6E-226 T 17-10-2018 IPR007443 Penicillin-binding protein activator LpoA FORC55_2236 293beb36fbba5a6e010f9eb19131ae6b 601 Gene3D G3DSA:3.40.50.2300 367 595 8.4E-64 T 17-10-2018 FORC55_2236 293beb36fbba5a6e010f9eb19131ae6b 601 SUPERFAMILY SSF53822 260 598 3.2E-69 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_2236 293beb36fbba5a6e010f9eb19131ae6b 601 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 601 29.968 T 17-10-2018 IPR007443 Penicillin-binding protein activator LpoA FORC55_2236 293beb36fbba5a6e010f9eb19131ae6b 601 Gene3D G3DSA:1.25.40.650 149 255 2.1E-17 T 17-10-2018 FORC55_2236 293beb36fbba5a6e010f9eb19131ae6b 601 Gene3D G3DSA:3.40.50.2300 261 594 8.4E-64 T 17-10-2018 FORC55_2236 293beb36fbba5a6e010f9eb19131ae6b 601 Gene3D G3DSA:1.25.40.10 22 144 2.0E-11 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0472 206540f8ee1f78d5a69dcb051ec7f27a 353 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 3.8E-47 T 17-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0472 206540f8ee1f78d5a69dcb051ec7f27a 353 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.909 T 17-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0472 206540f8ee1f78d5a69dcb051ec7f27a 353 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 338 9.5E-34 T 17-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 FORC55_0472 206540f8ee1f78d5a69dcb051ec7f27a 353 Gene3D G3DSA:3.40.50.2000 8 160 6.2E-119 T 17-10-2018 FORC55_0472 206540f8ee1f78d5a69dcb051ec7f27a 353 SUPERFAMILY SSF53756 5 351 7.33E-125 T 17-10-2018 FORC55_0472 206540f8ee1f78d5a69dcb051ec7f27a 353 Gene3D G3DSA:3.40.50.2000 161 318 6.2E-119 T 17-10-2018 FORC55_0472 206540f8ee1f78d5a69dcb051ec7f27a 353 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.3E-119 T 17-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 SUPERFAMILY SSF103190 87 173 1.18E-10 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 Gene3D G3DSA:3.30.450.20 47 270 1.2E-56 T 17-10-2018 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 Pfam PF02743 Cache domain 38 258 3.4E-27 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 Gene3D G3DSA:1.10.287.950 296 627 3.0E-72 T 17-10-2018 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 592 2.2E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 SMART SM00304 353 403 7.9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 SMART SM00304 296 350 9.0E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 SUPERFAMILY SSF58104 318 627 7.06E-78 T 17-10-2018 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 Gene3D G3DSA:3.30.450.20 60 168 1.2E-56 T 17-10-2018 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 Pfam PF00672 HAMP domain 300 346 1.2E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 SMART SM00283 365 626 6.5E-66 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 1.5E-21 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 1.5E-21 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1502 3ed70695c4cfa35ba620c0c3610554d7 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 1.5E-21 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0284 ba05c369aa5999d46d811f69cb7afb33 609 PIRSF PIRSF004950 1 609 1.1E-236 T 17-10-2018 IPR012159 Inner membrane protein YejM FORC55_0284 ba05c369aa5999d46d811f69cb7afb33 609 SUPERFAMILY SSF53649 245 575 1.27E-60 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 FORC55_0284 ba05c369aa5999d46d811f69cb7afb33 609 Pfam PF11893 Domain of unknown function (DUF3413) 4 241 5.9E-66 T 17-10-2018 IPR024588 Inner membrane protein YejM, N-terminal FORC55_0284 ba05c369aa5999d46d811f69cb7afb33 609 Gene3D G3DSA:3.40.720.10 241 535 4.8E-57 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 FORC55_0284 ba05c369aa5999d46d811f69cb7afb33 609 Pfam PF00884 Sulfatase 249 524 2.1E-33 T 17-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 SUPERFAMILY SSF51246 317 389 1.88E-18 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 2.9E-198 T 17-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 Gene3D G3DSA:3.40.50.20 1 120 1.7E-53 T 17-10-2018 FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 SUPERFAMILY SSF56059 111 313 1.4E-58 T 17-10-2018 FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 Gene3D G3DSA:3.30.1490.20 121 194 6.1E-34 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 SUPERFAMILY SSF52440 2 110 1.31E-35 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 Gene3D G3DSA:3.30.470.20 195 389 1.5E-60 T 17-10-2018 FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 Pfam PF02222 ATP-grasp domain 121 293 1.0E-57 T 17-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type FORC55_1561 27310b1116ef65d521bf35884ddbfeee 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 52.135 T 17-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 FORC55_2783 fa5c5e181f880090e8a6ca5424ec68b8 168 PIRSF PIRSF028301 1 168 6.4E-62 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 FORC55_2783 fa5c5e181f880090e8a6ca5424ec68b8 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 7.9E-57 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 FORC55_2783 fa5c5e181f880090e8a6ca5424ec68b8 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 158 2.1E-58 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 Gene3D G3DSA:1.20.1580.10 691 829 8.2E-141 T 17-10-2018 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 Pfam PF00005 ABC transporter 622 859 4.6E-10 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 Gene3D G3DSA:1.10.8.280 286 402 5.2E-248 T 17-10-2018 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 Gene3D G3DSA:1.20.1580.10 90 491 5.2E-248 T 17-10-2018 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 SUPERFAMILY SSF52540 621 909 2.35E-53 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 SUPERFAMILY SSF52540 4 568 9.69E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 17-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 Gene3D G3DSA:3.40.50.300 6 593 5.2E-248 T 17-10-2018 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 Gene3D G3DSA:3.30.190.20 130 243 5.2E-248 T 17-10-2018 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 Gene3D G3DSA:3.40.50.300 615 935 8.2E-141 T 17-10-2018 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2395 c8cb951a43646a2e0349fcd011391267 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 23.036 T 17-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 FORC55_0634 da42c3a5c1b7c8441e85442a4dcbeea6 214 Pfam PF14681 Uracil phosphoribosyltransferase 13 213 2.4E-65 T 17-10-2018 FORC55_0634 da42c3a5c1b7c8441e85442a4dcbeea6 214 Gene3D G3DSA:3.40.50.2020 7 214 1.6E-73 T 17-10-2018 FORC55_0634 da42c3a5c1b7c8441e85442a4dcbeea6 214 SUPERFAMILY SSF53271 10 212 3.54E-66 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like FORC55_0634 da42c3a5c1b7c8441e85442a4dcbeea6 214 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 8 214 44.598 T 17-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 FORC55_0634 da42c3a5c1b7c8441e85442a4dcbeea6 214 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 9 214 5.5E-92 T 17-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 FORC55_3072 d8f8a5c2ac724095fba4b6a82b58b500 90 SUPERFAMILY SSF47598 6 81 1.41E-18 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 FORC55_3072 d8f8a5c2ac724095fba4b6a82b58b500 90 Gene3D G3DSA:1.10.1220.10 1 49 4.6E-31 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 FORC55_3072 d8f8a5c2ac724095fba4b6a82b58b500 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 3.5E-21 T 17-10-2018 IPR014795 Vibrio phage ICP1, Orf50 FORC55_3072 d8f8a5c2ac724095fba4b6a82b58b500 90 Gene3D G3DSA:1.20.890.30 50 90 1.9E-27 T 17-10-2018 FORC55_3121 d8f8a5c2ac724095fba4b6a82b58b500 90 SUPERFAMILY SSF47598 6 81 1.41E-18 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 FORC55_3121 d8f8a5c2ac724095fba4b6a82b58b500 90 Gene3D G3DSA:1.10.1220.10 1 49 4.6E-31 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 FORC55_3121 d8f8a5c2ac724095fba4b6a82b58b500 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 3.5E-21 T 17-10-2018 IPR014795 Vibrio phage ICP1, Orf50 FORC55_3121 d8f8a5c2ac724095fba4b6a82b58b500 90 Gene3D G3DSA:1.20.890.30 50 90 1.9E-27 T 17-10-2018 FORC55_3198 f9d85254b4da5c3dae010301e2282233 458 PIRSF PIRSF000204 1 458 5.3E-236 T 17-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 FORC55_3198 f9d85254b4da5c3dae010301e2282233 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 5.4E-202 T 17-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 FORC55_3198 f9d85254b4da5c3dae010301e2282233 458 Gene3D G3DSA:3.40.50.1220 282 458 3.3E-89 T 17-10-2018 FORC55_3198 f9d85254b4da5c3dae010301e2282233 458 SUPERFAMILY SSF52467 285 458 2.17E-80 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 SUPERFAMILY SSF46911 3 74 3.66E-30 T 17-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 2.5E-38 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 1.0E-23 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 4.4E-19 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 4.4E-19 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 4.4E-19 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 4.4E-19 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 Gene3D G3DSA:4.10.640.10 20 75 1.1E-29 T 17-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 Pfam PF01084 Ribosomal protein S18 19 68 3.0E-26 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.803 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2418 84dbd0c869bdbe4e29abb3925b6d384f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 17-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0544 3561e47f61a2ba866b97a8d85555ab2a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.2E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0544 3561e47f61a2ba866b97a8d85555ab2a 304 SUPERFAMILY SSF53850 92 297 2.72E-40 T 17-10-2018 FORC55_0544 3561e47f61a2ba866b97a8d85555ab2a 304 Gene3D G3DSA:1.10.10.10 4 93 2.0E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0544 3561e47f61a2ba866b97a8d85555ab2a 304 SUPERFAMILY SSF46785 3 82 4.15E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0544 3561e47f61a2ba866b97a8d85555ab2a 304 Gene3D G3DSA:3.40.190.290 94 298 2.8E-37 T 17-10-2018 FORC55_0544 3561e47f61a2ba866b97a8d85555ab2a 304 Pfam PF03466 LysR substrate binding domain 90 294 5.7E-47 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2216 8054791cecb117593947b1e6bed609fa 126 PIRSF PIRSF006287 1 123 3.9E-49 T 17-10-2018 IPR008249 Uncharacterised protein family UPF0231 FORC55_2216 8054791cecb117593947b1e6bed609fa 126 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 1.0E-62 T 17-10-2018 IPR008249 Uncharacterised protein family UPF0231 FORC55_2216 8054791cecb117593947b1e6bed609fa 126 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 31.261 T 17-10-2018 IPR008249 Uncharacterised protein family UPF0231 FORC55_2216 8054791cecb117593947b1e6bed609fa 126 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 6.8E-42 T 17-10-2018 IPR008249 Uncharacterised protein family UPF0231 FORC55_1994 bdc0803d80de41cd33254c1bfd1d638c 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-69 T 17-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 FORC55_1994 bdc0803d80de41cd33254c1bfd1d638c 127 Gene3D G3DSA:3.90.1010.10 1 127 3.0E-59 T 17-10-2018 FORC55_1994 bdc0803d80de41cd33254c1bfd1d638c 127 SUPERFAMILY SSF82649 1 125 2.49E-48 T 17-10-2018 FORC55_1994 bdc0803d80de41cd33254c1bfd1d638c 127 Pfam PF01592 NifU-like N terminal domain 2 126 3.2E-57 T 17-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 FORC55_3246 d76320797b4049af0486f93b8d69a871 336 Gene3D G3DSA:2.160.10.10 95 296 8.4E-54 T 17-10-2018 FORC55_3246 d76320797b4049af0486f93b8d69a871 336 SUPERFAMILY SSF51161 101 302 7.08E-56 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_3246 d76320797b4049af0486f93b8d69a871 336 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 313 7.9E-73 T 17-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 FORC55_3246 d76320797b4049af0486f93b8d69a871 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 147 2.1E-9 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_3246 d76320797b4049af0486f93b8d69a871 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 209 236 1.5E-6 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_1843 74e1f60a6c61da5d09c066916ce235e2 408 SMART SM00710 321 342 400.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat FORC55_1843 74e1f60a6c61da5d09c066916ce235e2 408 SMART SM00710 116 147 3700.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat FORC55_1843 74e1f60a6c61da5d09c066916ce235e2 408 SMART SM00710 289 310 380.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat FORC55_1843 74e1f60a6c61da5d09c066916ce235e2 408 SMART SM00710 234 256 5200.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat FORC55_1843 74e1f60a6c61da5d09c066916ce235e2 408 SMART SM00710 257 279 1800.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat FORC55_1843 74e1f60a6c61da5d09c066916ce235e2 408 SUPERFAMILY SSF51126 15 390 1.32E-40 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor FORC55_1843 74e1f60a6c61da5d09c066916ce235e2 408 Gene3D G3DSA:2.160.20.10 36 407 1.3E-33 T 17-10-2018 IPR012334 Pectin lyase fold FORC55_1843 74e1f60a6c61da5d09c066916ce235e2 408 Pfam PF12708 Pectate lyase superfamily protein 37 248 2.5E-6 T 17-10-2018 IPR024535 Pectate lyase superfamily protein FORC55_0194 5cba374b911f0bf0328c32f98a06d970 312 SUPERFAMILY SSF55785 22 125 9.71E-6 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0194 5cba374b911f0bf0328c32f98a06d970 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 310 1.1E-34 T 17-10-2018 IPR000160 GGDEF domain FORC55_0194 5cba374b911f0bf0328c32f98a06d970 312 Gene3D G3DSA:3.30.70.270 149 311 1.6E-44 T 17-10-2018 FORC55_0194 5cba374b911f0bf0328c32f98a06d970 312 SMART SM00267 144 311 4.9E-38 T 17-10-2018 IPR000160 GGDEF domain FORC55_0194 5cba374b911f0bf0328c32f98a06d970 312 Gene3D G3DSA:3.30.450.20 42 146 2.3E-6 T 17-10-2018 FORC55_0194 5cba374b911f0bf0328c32f98a06d970 312 SUPERFAMILY SSF55073 160 309 1.18E-39 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0194 5cba374b911f0bf0328c32f98a06d970 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 307 2.3E-32 T 17-10-2018 IPR000160 GGDEF domain FORC55_1677 360f99b4df3c193359a610a285e8b343 206 Pfam PF02810 SEC-C motif 188 206 2.0E-9 T 17-10-2018 IPR004027 SEC-C motif FORC55_1677 360f99b4df3c193359a610a285e8b343 206 Gene3D G3DSA:3.10.450.50 126 206 7.5E-9 T 17-10-2018 FORC55_1677 360f99b4df3c193359a610a285e8b343 206 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 153 3.7E-8 T 17-10-2018 IPR011978 Uncharacterised protein family UPF0149 FORC55_1677 360f99b4df3c193359a610a285e8b343 206 SUPERFAMILY SSF103642 186 205 6.87E-7 T 17-10-2018 FORC55_3603 9292f226794ba3a8dca11683c234d9d8 266 SUPERFAMILY SSF100950 1 262 4.19E-104 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_3603 9292f226794ba3a8dca11683c234d9d8 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 17-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 FORC55_3603 9292f226794ba3a8dca11683c234d9d8 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.2E-140 T 17-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 FORC55_3603 9292f226794ba3a8dca11683c234d9d8 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.267 T 17-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 FORC55_3603 9292f226794ba3a8dca11683c234d9d8 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 223 1.0E-20 T 17-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 FORC55_3603 9292f226794ba3a8dca11683c234d9d8 266 Gene3D G3DSA:3.40.50.1360 1 266 1.8E-121 T 17-10-2018 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 Pfam PF01479 S4 domain 18 65 2.8E-7 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 312 7.2E-106 T 17-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 SUPERFAMILY SSF55120 77 309 7.4E-79 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 Gene3D G3DSA:3.30.2350.10 84 316 2.7E-73 T 17-10-2018 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 SMART SM00363 18 83 3.3E-7 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.5E-32 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 Gene3D G3DSA:3.10.290.10 2 76 6.7E-23 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_2030 dc1d6a04d8fa715589bb40d779f5cce9 324 SUPERFAMILY SSF55174 17 69 2.19E-10 T 17-10-2018 FORC55_2408 35fb2eca95afbcf46aa3a195eb637221 316 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 308 3.8E-156 T 17-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 FORC55_2408 35fb2eca95afbcf46aa3a195eb637221 316 PIRSF PIRSF006621 1 314 4.2E-71 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_2408 35fb2eca95afbcf46aa3a195eb637221 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 76 94 - T 17-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_2408 35fb2eca95afbcf46aa3a195eb637221 316 SUPERFAMILY SSF51395 1 308 1.3E-74 T 17-10-2018 FORC55_2408 35fb2eca95afbcf46aa3a195eb637221 316 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 50.161 T 17-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 FORC55_2408 35fb2eca95afbcf46aa3a195eb637221 316 Pfam PF01207 Dihydrouridine synthase (Dus) 1 305 6.6E-92 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_2408 35fb2eca95afbcf46aa3a195eb637221 316 Gene3D G3DSA:3.20.20.70 1 234 6.8E-71 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2408 35fb2eca95afbcf46aa3a195eb637221 316 Gene3D G3DSA:1.20.120.1460 237 313 7.4E-23 T 17-10-2018 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 SMART SM00836 461 577 6.2E-40 T 17-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 SUPERFAMILY SSF52374 111 454 1.92E-97 T 17-10-2018 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 27.98 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 Gene3D G3DSA:3.30.1360.70 1 106 4.7E-32 T 17-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 Pfam PF00750 tRNA synthetases class I (R) 100 447 6.1E-160 T 17-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 5.3E-196 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 SUPERFAMILY SSF55190 2 96 4.45E-21 T 17-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 Pfam PF05746 DALR anticodon binding domain 461 577 1.3E-35 T 17-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 Gene3D G3DSA:1.10.730.10 455 577 2.6E-34 T 17-10-2018 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 Gene3D G3DSA:3.40.50.620 108 454 4.5E-110 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 SMART SM01016 5 87 7.0E-28 T 17-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.6E-19 T 17-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 FORC55_0772 e705cee43ae54361e4241103d479eb2e 577 SUPERFAMILY SSF47323 455 577 1.57E-35 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1395 8d4ceaa2665fa6bd89b87525aaece617 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.8E-64 T 17-10-2018 IPR008514 Type VI secretion system effector, Hcp FORC55_1395 8d4ceaa2665fa6bd89b87525aaece617 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 6.6E-34 T 17-10-2018 IPR008514 Type VI secretion system effector, Hcp FORC55_1395 8d4ceaa2665fa6bd89b87525aaece617 172 SUPERFAMILY SSF141452 3 168 4.97E-40 T 17-10-2018 IPR036624 Hcp1-like superfamily FORC55_1395 8d4ceaa2665fa6bd89b87525aaece617 172 Gene3D G3DSA:2.30.110.20 2 172 3.0E-68 T 17-10-2018 IPR036624 Hcp1-like superfamily FORC55_1338 852f0d878b1833781b20682d723c9915 549 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 503 2.8E-10 T 17-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 FORC55_1338 852f0d878b1833781b20682d723c9915 549 SUPERFAMILY SSF54211 314 506 1.25E-34 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_1338 852f0d878b1833781b20682d723c9915 549 Gene3D G3DSA:3.30.230.10 291 533 1.0E-92 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_1338 852f0d878b1833781b20682d723c9915 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 2.0E-11 T 17-10-2018 FORC55_1338 852f0d878b1833781b20682d723c9915 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 2.0E-11 T 17-10-2018 FORC55_1338 852f0d878b1833781b20682d723c9915 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 2.0E-11 T 17-10-2018 FORC55_1338 852f0d878b1833781b20682d723c9915 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 2.0E-11 T 17-10-2018 FORC55_1338 852f0d878b1833781b20682d723c9915 549 Pfam PF13654 AAA domain 79 287 8.3E-20 T 17-10-2018 FORC55_1338 852f0d878b1833781b20682d723c9915 549 Gene3D G3DSA:3.40.50.300 67 191 2.1E-7 T 17-10-2018 FORC55_0362 e5d90fa416781f110b2e18f1d4797944 212 Pfam PF05494 MlaC protein 34 199 5.0E-48 T 17-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC FORC55_0362 e5d90fa416781f110b2e18f1d4797944 212 Gene3D G3DSA:3.10.450.710 25 204 2.5E-40 T 17-10-2018 FORC55_0362 e5d90fa416781f110b2e18f1d4797944 212 PIRSF PIRSF004649 1 211 7.1E-57 T 17-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC FORC55_2593 1ef66af3a83704957dc99d29b99552ed 80 Gene3D G3DSA:1.10.238.160 22 73 3.8E-6 T 17-10-2018 FORC55_2593 1ef66af3a83704957dc99d29b99552ed 80 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 19 68 1.4E-25 T 17-10-2018 IPR010260 DNA-binding transcriptional activator AlpA FORC55_1824 67fd1bdb1417045bc6b0ee4ea8725eab 371 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 367 28.403 T 17-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_1824 67fd1bdb1417045bc6b0ee4ea8725eab 371 Pfam PF01098 Cell cycle protein 21 365 7.4E-115 T 17-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_1824 67fd1bdb1417045bc6b0ee4ea8725eab 371 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 17-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_1824 67fd1bdb1417045bc6b0ee4ea8725eab 371 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 18 365 4.8E-138 T 17-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 SUPERFAMILY SSF48592 7 521 4.25E-77 T 17-10-2018 IPR027413 GroEL-like equatorial domain superfamily FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 SUPERFAMILY SSF54849 137 202 1.9E-23 T 17-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 4.2E-249 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 Gene3D G3DSA:1.10.560.10 8 521 7.5E-236 T 17-10-2018 IPR027413 GroEL-like equatorial domain superfamily FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 SUPERFAMILY SSF52029 185 376 5.76E-79 T 17-10-2018 IPR027409 GroEL-like apical domain superfamily FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.105 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 17-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 Gene3D G3DSA:3.30.260.10 136 410 7.5E-236 T 17-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 PRINTS PR00298 60kDa chaperonin signature 350 375 2.1E-71 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 PRINTS PR00298 60kDa chaperonin signature 268 291 2.1E-71 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 PRINTS PR00298 60kDa chaperonin signature 83 110 2.1E-71 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 PRINTS PR00298 60kDa chaperonin signature 398 419 2.1E-71 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 PRINTS PR00298 60kDa chaperonin signature 27 53 2.1E-71 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 7.3E-101 T 17-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 FORC55_3438 16cefc1d09daaa27556bc0ba982149fa 530 Gene3D G3DSA:3.50.7.10 192 372 7.5E-236 T 17-10-2018 IPR027409 GroEL-like apical domain superfamily FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 17-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 SMART SM01350 179 469 6.4E-214 T 17-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 Gene3D G3DSA:3.40.50.720 1 180 6.6E-56 T 17-10-2018 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 2.0E-233 T 17-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 SUPERFAMILY SSF51735 4 174 1.38E-55 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 2.5E-126 T 17-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 Gene3D G3DSA:1.20.5.320 435 482 2.7E-25 T 17-10-2018 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 Gene3D G3DSA:1.10.1040.10 181 434 1.9E-102 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 2.4E-51 T 17-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 SUPERFAMILY SSF48179 177 472 1.08E-126 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 PIRSF PIRSF000109 1 477 1.6E-241 T 17-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.6E-84 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.6E-84 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.6E-84 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.6E-84 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.6E-84 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_3491 db0a276d07f1790bfc43f6f13c2a5bf8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.6E-84 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 FORC55_2203 ecc9401f7a4f02d6a3573fb54925950a 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 39 5.9E-7 T 17-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain FORC55_2203 ecc9401f7a4f02d6a3573fb54925950a 341 SUPERFAMILY SSF161098 96 279 1.96E-18 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2203 ecc9401f7a4f02d6a3573fb54925950a 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 300 2.0E-18 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2203 ecc9401f7a4f02d6a3573fb54925950a 341 Gene3D G3DSA:1.10.3720.10 94 303 9.2E-15 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0604 09c8838ce1c53e243b9ae92fd11515e5 185 Pfam PF01765 Ribosome recycling factor 20 183 1.4E-63 T 17-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 FORC55_0604 09c8838ce1c53e243b9ae92fd11515e5 185 Gene3D G3DSA:3.30.1360.40 35 100 7.5E-30 T 17-10-2018 FORC55_0604 09c8838ce1c53e243b9ae92fd11515e5 185 SUPERFAMILY SSF55194 2 184 2.22E-72 T 17-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 FORC55_0604 09c8838ce1c53e243b9ae92fd11515e5 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.9E-76 T 17-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 FORC55_0604 09c8838ce1c53e243b9ae92fd11515e5 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.755 T 17-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 FORC55_0604 09c8838ce1c53e243b9ae92fd11515e5 185 Gene3D G3DSA:1.10.132.20 101 185 1.6E-29 T 17-10-2018 FORC55_0604 09c8838ce1c53e243b9ae92fd11515e5 185 Gene3D G3DSA:1.10.132.20 1 34 6.9E-8 T 17-10-2018 FORC55_1829 bcd0c59fb478e7bc49d3aa694719feb5 321 Gene3D G3DSA:3.20.20.70 84 293 1.4E-24 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1829 bcd0c59fb478e7bc49d3aa694719feb5 321 PIRSF PIRSF005963 2 320 6.3E-130 T 17-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 FORC55_1829 bcd0c59fb478e7bc49d3aa694719feb5 321 Pfam PF04055 Radical SAM superfamily 91 252 2.2E-18 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_1829 bcd0c59fb478e7bc49d3aa694719feb5 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.467 T 17-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 FORC55_1829 bcd0c59fb478e7bc49d3aa694719feb5 321 SMART SM00729 84 293 1.0E-18 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_1829 bcd0c59fb478e7bc49d3aa694719feb5 321 SUPERFAMILY SSF102114 52 316 5.62E-69 T 17-10-2018 FORC55_1829 bcd0c59fb478e7bc49d3aa694719feb5 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 1.8E-8 T 17-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 FORC55_1829 bcd0c59fb478e7bc49d3aa694719feb5 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 1.1E-149 T 17-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 FORC55_1159 9dccde427c8e2605ffa96a5ebbccf20a 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.3E-95 T 17-10-2018 IPR014319 Phage shock protein, PspA FORC55_1159 9dccde427c8e2605ffa96a5ebbccf20a 222 Pfam PF04012 PspA/IM30 family 2 218 9.8E-65 T 17-10-2018 IPR007157 PspA/IM30 FORC55_3531 5ff710cfac126ffd00b7e29b1142a2cc 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 7.2E-19 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3531 5ff710cfac126ffd00b7e29b1142a2cc 296 Gene3D G3DSA:1.10.3720.10 1 283 1.5E-74 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3531 5ff710cfac126ffd00b7e29b1142a2cc 296 SUPERFAMILY SSF161098 10 296 4.32E-69 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2290 30a75b7e21c470b6a088386773a5c925 208 SMART SM01207 10 185 4.7E-86 T 17-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 FORC55_2290 30a75b7e21c470b6a088386773a5c925 208 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.211 T 17-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 FORC55_2290 30a75b7e21c470b6a088386773a5c925 208 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 1.1E-74 T 17-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 FORC55_2290 30a75b7e21c470b6a088386773a5c925 208 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 2.1E-51 T 17-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 FORC55_0071 7441804f7c346f028a2ebc27ffae4fee 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 24.502 T 17-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 FORC55_0071 7441804f7c346f028a2ebc27ffae4fee 82 Pfam PF02416 mttA/Hcf106 family 4 54 6.4E-15 T 17-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 FORC55_0071 7441804f7c346f028a2ebc27ffae4fee 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.9E-22 T 17-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 SUPERFAMILY SSF52540 2 352 2.66E-124 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 SUPERFAMILY SSF52540 367 810 3.51E-102 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 Gene3D G3DSA:1.10.10.160 79 187 2.0E-127 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 Gene3D G3DSA:3.40.50.300 340 811 8.7E-190 T 17-10-2018 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 Gene3D G3DSA:1.10.486.10 458 670 8.7E-190 T 17-10-2018 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 Gene3D G3DSA:1.10.10.990 872 948 3.6E-17 T 17-10-2018 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 SUPERFAMILY SSF52980 826 1135 1.66E-74 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 PIRSF PIRSF000980 1 1148 0.0 T 17-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 809 3.1E-297 T 17-10-2018 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 Gene3D G3DSA:3.40.50.10930 4 322 2.0E-127 T 17-10-2018 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1109 0.0 T 17-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 FORC55_0546 507ca9737086dade42a7c6fc1b1be4ee 1148 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1146 20.74 T 17-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 FORC55_2692 a5aefa324cdca508fe4d9be4c5d27142 658 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 1.3E-146 T 17-10-2018 IPR021781 Protein of unknown function DUF3346 FORC55_0271 67897b72736613d23a247967d6cbc228 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-26 T 17-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 FORC55_0271 67897b72736613d23a247967d6cbc228 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-26 T 17-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 FORC55_0271 67897b72736613d23a247967d6cbc228 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-26 T 17-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 FORC55_0271 67897b72736613d23a247967d6cbc228 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-26 T 17-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 FORC55_0271 67897b72736613d23a247967d6cbc228 289 Gene3D G3DSA:3.40.50.300 1 289 1.6E-112 T 17-10-2018 FORC55_0271 67897b72736613d23a247967d6cbc228 289 SUPERFAMILY SSF52540 4 286 4.11E-49 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0271 67897b72736613d23a247967d6cbc228 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.0E-69 T 17-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 258 2.7E-84 T 17-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 Gene3D G3DSA:4.10.1250.10 236 284 5.7E-20 T 17-10-2018 FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 Gene3D G3DSA:3.30.1360.120 10 234 7.9E-82 T 17-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 Gene3D G3DSA:3.30.70.1400 59 142 7.9E-82 T 17-10-2018 FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 SUPERFAMILY SSF103025 8 284 7.38E-89 T 17-10-2018 FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 271 365 2.4E-22 T 17-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 SUPERFAMILY SSF101790 282 374 7.85E-26 T 17-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 Gene3D G3DSA:2.40.30.110 287 364 5.5E-28 T 17-10-2018 FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 PIRSF PIRSF006487 1 375 3.1E-79 T 17-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 FORC55_2988 6f92fb5833cdeaf01e2dd33981cbcc8e 376 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 9 369 3.7E-108 T 17-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 FORC55_2928 6bf28b44debf49cfeeca0e0c5ef8cefd 938 Pfam PF13604 AAA domain 225 446 6.8E-26 T 17-10-2018 FORC55_2928 6bf28b44debf49cfeeca0e0c5ef8cefd 938 Pfam PF13538 UvrD-like helicase C-terminal domain 647 696 2.8E-16 T 17-10-2018 IPR027785 UvrD-like helicase C-terminal domain FORC55_2928 6bf28b44debf49cfeeca0e0c5ef8cefd 938 Gene3D G3DSA:3.40.50.300 190 447 4.3E-36 T 17-10-2018 FORC55_2928 6bf28b44debf49cfeeca0e0c5ef8cefd 938 Pfam PF13643 Domain of unknown function (DUF4145) 22 109 1.2E-9 T 17-10-2018 IPR025285 Domain of unknown function DUF4145 FORC55_2928 6bf28b44debf49cfeeca0e0c5ef8cefd 938 Gene3D G3DSA:3.40.50.300 621 703 3.7E-15 T 17-10-2018 FORC55_2928 6bf28b44debf49cfeeca0e0c5ef8cefd 938 SUPERFAMILY SSF52540 221 401 8.48E-21 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2928 6bf28b44debf49cfeeca0e0c5ef8cefd 938 SUPERFAMILY SSF52540 382 703 1.66E-33 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2957 5694e29e395adbeadf91fe0ef9b49980 294 Gene3D G3DSA:3.20.20.150 3 287 3.9E-65 T 17-10-2018 FORC55_2957 5694e29e395adbeadf91fe0ef9b49980 294 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 7 285 5.4E-100 T 17-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 FORC55_2957 5694e29e395adbeadf91fe0ef9b49980 294 Pfam PF01261 Xylose isomerase-like TIM barrel 30 238 8.6E-35 T 17-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain FORC55_2957 5694e29e395adbeadf91fe0ef9b49980 294 SUPERFAMILY SSF51658 7 282 9.69E-49 T 17-10-2018 IPR036237 Xylose isomerase-like superfamily FORC55_2985 5d3f5e13840c9cf8cc123a6652763c11 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.6E-50 T 17-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 FORC55_2985 5d3f5e13840c9cf8cc123a6652763c11 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 46 75 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 FORC55_2985 5d3f5e13840c9cf8cc123a6652763c11 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 42.347 T 17-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 FORC55_2985 5d3f5e13840c9cf8cc123a6652763c11 126 SUPERFAMILY SSF51230 3 125 1.65E-44 T 17-10-2018 IPR011053 Single hybrid motif FORC55_2985 5d3f5e13840c9cf8cc123a6652763c11 126 Gene3D G3DSA:2.40.50.100 1 126 2.5E-49 T 17-10-2018 FORC55_2985 5d3f5e13840c9cf8cc123a6652763c11 126 Pfam PF01597 Glycine cleavage H-protein 5 125 9.3E-49 T 17-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 SUPERFAMILY SSF54719 87 201 1.7E-44 T 17-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 SUPERFAMILY SSF46609 1 86 1.3E-29 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 2.1E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 2.1E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.1E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.1E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 2.1E-21 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 8.0E-26 T 17-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 Gene3D G3DSA:2.40.500.20 84 200 8.8E-49 T 17-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 PIRSF PIRSF000349 1 205 1.2E-80 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 17-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 8.9E-41 T 17-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0197 8d4a7f4e782da9fc01da0ba806fd8e8a 205 Gene3D G3DSA:1.10.287.990 20 83 1.5E-23 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 FORC55_0579 63ec0dfe53fd6a877d72a575a0e6ee41 440 SUPERFAMILY SSF53098 103 419 2.96E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_0579 63ec0dfe53fd6a877d72a575a0e6ee41 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.1E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_0579 63ec0dfe53fd6a877d72a575a0e6ee41 440 Pfam PF01609 Transposase DDE domain 129 350 6.4E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_1999 63ec0dfe53fd6a877d72a575a0e6ee41 440 SUPERFAMILY SSF53098 103 419 2.96E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1999 63ec0dfe53fd6a877d72a575a0e6ee41 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.1E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_1999 63ec0dfe53fd6a877d72a575a0e6ee41 440 Pfam PF01609 Transposase DDE domain 129 350 6.4E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_2908 63ec0dfe53fd6a877d72a575a0e6ee41 440 SUPERFAMILY SSF53098 103 419 2.96E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2908 63ec0dfe53fd6a877d72a575a0e6ee41 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.1E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_2908 63ec0dfe53fd6a877d72a575a0e6ee41 440 Pfam PF01609 Transposase DDE domain 129 350 6.4E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_0980 30e42b3982ca18f4f4fb499371a00869 183 Pfam PF07445 Primosomal replication protein priC 7 180 2.2E-50 T 17-10-2018 IPR010890 Primosomal replication PriB/PriC FORC55_0980 30e42b3982ca18f4f4fb499371a00869 183 Gene3D G3DSA:1.20.1270.340 2 100 3.8E-16 T 17-10-2018 IPR038338 PriB/PriC superfamily FORC55_2978 a7871f452b9e178b5590744a95874804 643 Gene3D G3DSA:1.10.287.950 310 643 4.0E-68 T 17-10-2018 FORC55_2978 a7871f452b9e178b5590744a95874804 643 SMART SM00283 380 641 3.1E-62 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2978 a7871f452b9e178b5590744a95874804 643 Pfam PF02743 Cache domain 50 272 5.5E-20 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_2978 a7871f452b9e178b5590744a95874804 643 SUPERFAMILY SSF103190 129 193 1.28E-8 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_2978 a7871f452b9e178b5590744a95874804 643 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 607 1.1E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2978 a7871f452b9e178b5590744a95874804 643 SUPERFAMILY SSF58104 333 642 8.63E-72 T 17-10-2018 FORC55_2978 a7871f452b9e178b5590744a95874804 643 Gene3D G3DSA:3.30.450.20 71 182 5.9E-26 T 17-10-2018 FORC55_2978 a7871f452b9e178b5590744a95874804 643 Pfam PF00672 HAMP domain 315 361 2.4E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2978 a7871f452b9e178b5590744a95874804 643 Gene3D G3DSA:3.30.450.20 65 284 5.9E-26 T 17-10-2018 FORC55_2978 a7871f452b9e178b5590744a95874804 643 SMART SM00304 311 365 3.1E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2077 1e834523f85900d75cfabd88878f70f0 215 SUPERFAMILY SSF47413 4 64 8.16E-12 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2077 1e834523f85900d75cfabd88878f70f0 215 Gene3D G3DSA:2.10.109.10 81 210 1.2E-49 T 17-10-2018 FORC55_2077 1e834523f85900d75cfabd88878f70f0 215 Pfam PF01381 Helix-turn-helix 16 61 2.1E-7 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2077 1e834523f85900d75cfabd88878f70f0 215 SMART SM00530 7 61 1.6E-8 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2077 1e834523f85900d75cfabd88878f70f0 215 Pfam PF00717 Peptidase S24-like 126 200 1.4E-15 T 17-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C FORC55_2077 1e834523f85900d75cfabd88878f70f0 215 Gene3D G3DSA:1.10.260.40 1 68 8.6E-24 T 17-10-2018 FORC55_2077 1e834523f85900d75cfabd88878f70f0 215 SUPERFAMILY SSF51306 84 212 2.27E-28 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily FORC55_1886 de9c9216adaef8140c7f71a00ed10b43 177 Pfam PF13302 Acetyltransferase (GNAT) domain 7 139 6.1E-18 T 17-10-2018 IPR000182 GNAT domain FORC55_1886 de9c9216adaef8140c7f71a00ed10b43 177 SUPERFAMILY SSF55729 2 141 2.9E-22 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_1886 de9c9216adaef8140c7f71a00ed10b43 177 Gene3D G3DSA:3.40.630.30 1 149 4.0E-22 T 17-10-2018 FORC55_1266 bae9ca1aeb7ea39008b271ad6eb26864 419 SUPERFAMILY SSF56954 4 408 1.18E-70 T 17-10-2018 FORC55_1266 bae9ca1aeb7ea39008b271ad6eb26864 419 Pfam PF02321 Outer membrane efflux protein 226 404 2.4E-26 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_1266 bae9ca1aeb7ea39008b271ad6eb26864 419 Pfam PF02321 Outer membrane efflux protein 26 202 6.8E-24 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_1266 bae9ca1aeb7ea39008b271ad6eb26864 419 Gene3D G3DSA:1.20.1600.10 24 419 5.1E-68 T 17-10-2018 FORC55_3436 f8face4a20c1df7e76372bfe79e9ccdc 448 Pfam PF01769 Divalent cation transporter 319 440 8.3E-23 T 17-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 FORC55_3436 f8face4a20c1df7e76372bfe79e9ccdc 448 SMART SM00924 34 137 6.1E-14 T 17-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain FORC55_3436 f8face4a20c1df7e76372bfe79e9ccdc 448 SUPERFAMILY SSF54631 137 272 1.39E-13 T 17-10-2018 FORC55_3436 f8face4a20c1df7e76372bfe79e9ccdc 448 SUPERFAMILY SSF158791 33 129 3.79E-13 T 17-10-2018 FORC55_3436 f8face4a20c1df7e76372bfe79e9ccdc 448 Pfam PF03448 MgtE intracellular N domain 36 135 5.4E-14 T 17-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain FORC55_3436 f8face4a20c1df7e76372bfe79e9ccdc 448 SUPERFAMILY SSF161093 276 446 6.67E-47 T 17-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 FORC55_3436 f8face4a20c1df7e76372bfe79e9ccdc 448 Gene3D G3DSA:1.10.357.20 274 447 6.3E-47 T 17-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain FORC55_3436 f8face4a20c1df7e76372bfe79e9ccdc 448 Gene3D G3DSA:3.10.580.10 133 258 4.3E-36 T 17-10-2018 FORC55_2370 b51e27cc13cbe6689c0d8c48a7a60f47 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.1E-103 T 17-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 FORC55_2370 b51e27cc13cbe6689c0d8c48a7a60f47 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.3E-172 T 17-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 FORC55_2370 b51e27cc13cbe6689c0d8c48a7a60f47 489 Gene3D G3DSA:3.40.1260.20 402 489 1.4E-7 T 17-10-2018 FORC55_2370 b51e27cc13cbe6689c0d8c48a7a60f47 489 SMART SM00316 37 122 5.6E-10 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_2370 b51e27cc13cbe6689c0d8c48a7a60f47 489 Gene3D G3DSA:2.40.50.140 31 127 7.0E-32 T 17-10-2018 FORC55_2370 b51e27cc13cbe6689c0d8c48a7a60f47 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 17-10-2018 IPR003029 S1 domain GO:0003676 FORC55_2370 b51e27cc13cbe6689c0d8c48a7a60f47 489 SUPERFAMILY SSF50249 39 128 1.44E-19 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0220 895aebceabdc74ab48724ac083cefbb9 116 Gene3D G3DSA:3.30.429.10 1 116 2.2E-33 T 17-10-2018 IPR014347 Tautomerase/MIF superfamily FORC55_0220 895aebceabdc74ab48724ac083cefbb9 116 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 5.1E-6 T 17-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 FORC55_0220 895aebceabdc74ab48724ac083cefbb9 116 SUPERFAMILY SSF55331 2 115 1.83E-35 T 17-10-2018 IPR014347 Tautomerase/MIF superfamily FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 Gene3D G3DSA:3.30.470.20 191 329 1.1E-60 T 17-10-2018 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 6.1E-30 T 17-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 Gene3D G3DSA:3.30.1490.20 121 190 1.8E-28 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.8E-82 T 17-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 Gene3D G3DSA:3.40.50.20 2 95 8.3E-39 T 17-10-2018 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 SUPERFAMILY SSF51246 329 424 1.1E-33 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.932 T 17-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 SMART SM01210 330 423 2.1E-56 T 17-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 SUPERFAMILY SSF52440 1 103 1.25E-37 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 Gene3D G3DSA:3.90.600.10 330 429 6.1E-35 T 17-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 SUPERFAMILY SSF56059 104 323 5.83E-68 T 17-10-2018 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.1E-186 T 17-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 17-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.4E-35 T 17-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_2506 1b74774c35a77715df11d3dd4021c99c 429 SMART SM01209 103 296 8.3E-140 T 17-10-2018 FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 Pfam PF01645 Conserved region in glutamate synthase 817 1187 3.0E-152 T 17-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 Gene3D G3DSA:2.160.20.60 1239 1510 1.2E-108 T 17-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 SUPERFAMILY SSF51395 461 1220 6.96E-271 T 17-10-2018 FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 Pfam PF01493 GXGXG motif 1267 1451 5.7E-81 T 17-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 Pfam PF00310 Glutamine amidotransferases class-II 21 443 5.6E-186 T 17-10-2018 IPR017932 Glutamine amidotransferase type 2 domain FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 SUPERFAMILY SSF69336 1235 1498 1.7E-93 T 17-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 Pfam PF04898 Glutamate synthase central domain 472 756 3.6E-116 T 17-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 SUPERFAMILY SSF56235 21 447 6.64E-152 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_0500 dd4ab589c141bb3c9e07241858d03ed1 1514 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0003 2ba68ca7fa27bbbee133491a95e70831 363 Gene3D G3DSA:3.40.50.300 7 336 7.7E-82 T 17-10-2018 FORC55_0003 2ba68ca7fa27bbbee133491a95e70831 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 7.2E-117 T 17-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 FORC55_0003 2ba68ca7fa27bbbee133491a95e70831 363 ProSitePatterns PS00617 RecF protein signature 1. 122 142 - T 17-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 FORC55_0003 2ba68ca7fa27bbbee133491a95e70831 363 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 17-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 FORC55_0003 2ba68ca7fa27bbbee133491a95e70831 363 SUPERFAMILY SSF52540 1 343 1.33E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0003 2ba68ca7fa27bbbee133491a95e70831 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 96.359 T 17-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 FORC55_0003 2ba68ca7fa27bbbee133491a95e70831 363 Gene3D G3DSA:1.20.1050.90 125 302 7.7E-82 T 17-10-2018 FORC55_0003 2ba68ca7fa27bbbee133491a95e70831 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 359 4.3E-36 T 17-10-2018 IPR003395 RecF/RecN/SMC, N-terminal FORC55_2221 2d13c827882d6a22f74dd8cbdfdf1c2d 395 SUPERFAMILY SSF53474 13 192 8.44E-11 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2221 2d13c827882d6a22f74dd8cbdfdf1c2d 395 Pfam PF12697 Alpha/beta hydrolase family 23 248 1.4E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_1955 8ab25667a92891db8348a6d3ff2a9e85 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 3.2E-178 T 17-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 FORC55_1955 8ab25667a92891db8348a6d3ff2a9e85 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 430 2.0E-157 T 17-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 FORC55_1955 8ab25667a92891db8348a6d3ff2a9e85 433 PIRSF PIRSF015658 1 432 8.1E-173 T 17-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 FORC55_0072 10cb7641c86ef5eadd4210d52d83113f 133 Pfam PF02416 mttA/Hcf106 family 4 36 6.9E-6 T 17-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 FORC55_0072 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.5E-26 T 17-10-2018 FORC55_0072 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.5E-26 T 17-10-2018 FORC55_0072 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.5E-26 T 17-10-2018 FORC55_0072 10cb7641c86ef5eadd4210d52d83113f 133 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 124 18.531 T 17-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 FORC55_0072 10cb7641c86ef5eadd4210d52d83113f 133 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 9.5E-35 T 17-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 SMART SM00897 27 216 5.9E-25 T 17-10-2018 IPR013702 FIST domain, N-terminal FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 SMART SM01204 217 343 1.2E-10 T 17-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 SUPERFAMILY SSF141868 599 826 4.32E-55 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 Pfam PF10442 FIST C domain 220 340 9.7E-7 T 17-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 Pfam PF00563 EAL domain 599 825 7.1E-57 T 17-10-2018 IPR001633 EAL domain FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 Gene3D G3DSA:3.20.20.450 592 829 4.5E-58 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 SMART SM00052 592 829 7.0E-43 T 17-10-2018 IPR001633 EAL domain FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 Pfam PF08495 FIST N domain 30 215 5.4E-20 T 17-10-2018 IPR013702 FIST domain, N-terminal FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 SUPERFAMILY SSF55073 423 573 1.8E-9 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 Pfam PF00990 Diguanylate cyclase, GGDEF domain 419 480 1.8E-8 T 17-10-2018 IPR000160 GGDEF domain FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 SMART SM00267 406 579 0.0019 T 17-10-2018 IPR000160 GGDEF domain FORC55_0107 696e2c1327663ad042217ef72df1a8d1 829 Gene3D G3DSA:3.30.70.270 416 591 4.9E-13 T 17-10-2018 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 Gene3D G3DSA:3.60.21.10 30 365 1.5E-130 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 511 4.0E-34 T 17-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 Gene3D G3DSA:3.90.780.10 366 552 3.0E-59 T 17-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 17-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 420 443 2.2E-54 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 211 228 2.2E-54 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 287 307 2.2E-54 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 487 506 2.2E-54 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 242 265 2.2E-54 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 36 54 2.2E-54 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 17-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 SUPERFAMILY SSF56300 31 363 5.58E-101 T 17-10-2018 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 4.5E-21 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_0680 b6fd63c827979ddb9695df8932d33c37 553 SUPERFAMILY SSF55816 366 542 3.4E-52 T 17-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.6E-17 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.599 T 17-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 SUPERFAMILY SSF50465 298 393 2.3E-35 T 17-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 Gene3D G3DSA:2.40.30.10 207 334 2.1E-51 T 17-10-2018 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 SUPERFAMILY SSF52540 6 219 1.77E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-58 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-13 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 Gene3D G3DSA:2.40.30.10 338 393 7.3E-30 T 17-10-2018 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 SUPERFAMILY SSF50447 205 301 1.96E-29 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.7E-232 T 17-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 Gene3D G3DSA:3.40.50.300 1 203 1.6E-70 T 17-10-2018 FORC55_2422 1da12d5f371a972a92853dda68dfeb41 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.2E-33 T 17-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal FORC55_2271 151a67955455c6e88c27927be88d74e2 354 Hamap MF_00268 Protein RecA [recA]. 5 329 50.81 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 SMART SM00382 57 228 1.4E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2271 151a67955455c6e88c27927be88d74e2 354 Gene3D G3DSA:3.40.50.300 26 267 2.4E-83 T 17-10-2018 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 Pfam PF00154 recA bacterial DNA recombination protein 7 267 5.4E-143 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.0E-171 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 297 314 4.7E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 127 156 4.7E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 210 238 4.7E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 93 122 4.7E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 243 272 4.7E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 165 194 4.7E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 FORC55_2271 151a67955455c6e88c27927be88d74e2 354 SUPERFAMILY SSF52540 4 266 4.92E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2271 151a67955455c6e88c27927be88d74e2 354 SUPERFAMILY SSF54752 269 325 1.05E-21 T 17-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal FORC55_2271 151a67955455c6e88c27927be88d74e2 354 Gene3D G3DSA:3.30.250.10 268 326 4.1E-27 T 17-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal FORC55_2271 151a67955455c6e88c27927be88d74e2 354 ProSitePatterns PS00321 recA signature. 213 221 - T 17-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 FORC55_2319 eec5dfa5c061f4beba8c1a7c1a667d28 243 Gene3D G3DSA:3.40.1280.10 74 243 4.5E-66 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_2319 eec5dfa5c061f4beba8c1a7c1a667d28 243 Pfam PF04452 RNA methyltransferase 19 236 4.8E-73 T 17-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 FORC55_2319 eec5dfa5c061f4beba8c1a7c1a667d28 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.2E-84 T 17-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 FORC55_2319 eec5dfa5c061f4beba8c1a7c1a667d28 243 SUPERFAMILY SSF88697 2 70 5.72E-17 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_2319 eec5dfa5c061f4beba8c1a7c1a667d28 243 PIRSF PIRSF015601 2 242 7.1E-55 T 17-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 FORC55_2319 eec5dfa5c061f4beba8c1a7c1a667d28 243 SUPERFAMILY SSF75217 75 242 6.11E-52 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_2319 eec5dfa5c061f4beba8c1a7c1a667d28 243 Gene3D G3DSA:2.40.240.20 1 71 8.9E-22 T 17-10-2018 FORC55_0044 9c4deb074d4a26487a089642f1010620 183 Gene3D G3DSA:2.160.10.10 1 183 2.1E-53 T 17-10-2018 FORC55_0044 9c4deb074d4a26487a089642f1010620 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 1.0E-4 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0044 9c4deb074d4a26487a089642f1010620 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 6.3E-7 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0044 9c4deb074d4a26487a089642f1010620 183 SUPERFAMILY SSF51161 4 175 2.91E-43 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_1934 f3a8dd91dd386dd02b0071de13ed26a8 304 Pfam PF02156 Glycosyl hydrolase family 26 163 275 1.1E-5 T 17-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 FORC55_0828 91653ef2a721e748284a031802b9f74c 324 SUPERFAMILY SSF48019 210 322 7.31E-27 T 17-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 FORC55_0828 91653ef2a721e748284a031802b9f74c 324 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 15 199 1.5E-62 T 17-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0828 91653ef2a721e748284a031802b9f74c 324 Gene3D G3DSA:3.40.50.300 5 169 3.9E-49 T 17-10-2018 FORC55_0828 91653ef2a721e748284a031802b9f74c 324 SUPERFAMILY SSF52540 8 194 2.57E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0828 91653ef2a721e748284a031802b9f74c 324 Pfam PF13177 DNA polymerase III, delta subunit 18 168 1.3E-44 T 17-10-2018 FORC55_0828 91653ef2a721e748284a031802b9f74c 324 Gene3D G3DSA:1.20.272.10 211 322 7.1E-7 T 17-10-2018 FORC55_0828 91653ef2a721e748284a031802b9f74c 324 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 211 317 1.7E-22 T 17-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2432 946142f5f11a7f049d1723ae66a36ac1 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.274 T 17-10-2018 IPR007236 SlyX FORC55_2432 946142f5f11a7f049d1723ae66a36ac1 75 Pfam PF04102 SlyX 9 75 5.8E-24 T 17-10-2018 IPR007236 SlyX FORC55_1255 ebf9e2fe8612df70e4ec93979cf7c8a3 105 Pfam PF04266 ASCH domain 8 93 1.4E-13 T 17-10-2018 IPR007374 ASCH domain FORC55_1255 ebf9e2fe8612df70e4ec93979cf7c8a3 105 SUPERFAMILY SSF88697 4 103 2.31E-31 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_1255 ebf9e2fe8612df70e4ec93979cf7c8a3 105 SMART SM01022 7 105 2.6E-24 T 17-10-2018 IPR007374 ASCH domain FORC55_1255 ebf9e2fe8612df70e4ec93979cf7c8a3 105 Gene3D G3DSA:2.30.130.30 2 104 5.0E-43 T 17-10-2018 FORC55_1255 ebf9e2fe8612df70e4ec93979cf7c8a3 105 PIRSF PIRSF029143 2 105 4.7E-43 T 17-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 FORC55_1255 ebf9e2fe8612df70e4ec93979cf7c8a3 105 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 3 104 30.251 T 17-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 SMART SM00387 528 641 2.8E-27 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 SUPERFAMILY SSF52172 3 136 2.03E-6 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 SUPERFAMILY SSF51206 201 310 1.1E-20 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 Gene3D G3DSA:3.30.565.10 490 641 2.5E-36 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.8E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.8E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.8E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 SUPERFAMILY SSF55874 481 641 3.14E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 381 1.4E-6 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 SUPERFAMILY SSF47384 335 378 1.35E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 Gene3D G3DSA:2.60.120.10 176 317 8.2E-21 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 3.4E-17 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 639 3.3E-21 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1626 2e2b9485867fc409c627e86213ee269d 651 Gene3D G3DSA:3.40.50.2300 2 139 3.6E-7 T 17-10-2018 FORC55_0924 507ae801655166c4f1a4b73c36f86725 1227 Gene3D G3DSA:3.40.390.10 438 680 2.6E-8 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 FORC55_0924 507ae801655166c4f1a4b73c36f86725 1227 Pfam PF16313 Met-zincin 610 699 5.0E-8 T 17-10-2018 IPR032534 Domain of unknown function DUF4953 FORC55_0924 507ae801655166c4f1a4b73c36f86725 1227 SUPERFAMILY SSF55486 308 679 7.58E-17 T 17-10-2018 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 Gene3D G3DSA:3.90.20.20 37 143 3.8E-32 T 17-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 SUPERFAMILY SSF51064 145 200 8.5E-20 T 17-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 SUPERFAMILY SSF58014 46 144 3.27E-28 T 17-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 PRINTS PR00773 GrpE protein signature 97 112 6.5E-29 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 PRINTS PR00773 GrpE protein signature 69 85 6.5E-29 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 PRINTS PR00773 GrpE protein signature 152 167 6.5E-29 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 PRINTS PR00773 GrpE protein signature 179 198 6.5E-29 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 Pfam PF01025 GrpE 40 200 3.2E-54 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 Hamap MF_01151 Protein GrpE [grpE]. 2 200 22.132 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 FORC55_1909 cd90fdf8fdae11d47fceb6f001dff59d 200 Gene3D G3DSA:2.30.22.10 144 200 3.0E-26 T 17-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 FORC55_1583 1cf9b15112ff6e116b63aea18c8e5f69 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 216 2.5E-97 T 17-10-2018 IPR021974 Protein of unknown function DUF3581 FORC55_0439 9be4da3afb31fee4bb360c56f9503707 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 431 3.8E-109 T 17-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 FORC55_0439 9be4da3afb31fee4bb360c56f9503707 436 Gene3D G3DSA:1.20.1600.10 23 435 1.9E-119 T 17-10-2018 FORC55_0439 9be4da3afb31fee4bb360c56f9503707 436 Pfam PF02321 Outer membrane efflux protein 25 207 7.5E-28 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_0439 9be4da3afb31fee4bb360c56f9503707 436 Pfam PF02321 Outer membrane efflux protein 231 417 1.5E-34 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_0439 9be4da3afb31fee4bb360c56f9503707 436 SUPERFAMILY SSF56954 1 423 2.62E-91 T 17-10-2018 FORC55_1435 73009f8751047fb7d55f9165165a057d 365 SUPERFAMILY SSF161098 155 346 7.59E-41 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1435 73009f8751047fb7d55f9165165a057d 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 349 1.3E-22 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1435 73009f8751047fb7d55f9165165a057d 365 Gene3D G3DSA:1.10.3720.10 149 363 8.8E-48 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1435 73009f8751047fb7d55f9165165a057d 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 8.1E-22 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 Pfam PF00005 ABC transporter 19 185 1.2E-23 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 Gene3D G3DSA:3.40.50.300 281 550 6.7E-69 T 17-10-2018 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 SUPERFAMILY SSF52540 310 523 5.09E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 Pfam PF16326 ABC transporter C-terminal domain 564 632 1.0E-21 T 17-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 Gene3D G3DSA:1.10.287.380 554 637 1.7E-28 T 17-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 Pfam PF00005 ABC transporter 336 469 2.2E-26 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 Pfam PF12848 ABC transporter 224 298 1.9E-10 T 17-10-2018 IPR032781 ABC-transporter extension domain FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 SUPERFAMILY SSF52540 3 241 5.94E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 Gene3D G3DSA:3.40.50.300 8 279 1.5E-65 T 17-10-2018 FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 SMART SM00382 28 230 6.0E-16 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1335 0e281af06f41c6561a756f4656d7a9c3 639 SMART SM00382 344 514 1.0E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3249 369b617c2b4ba7a142ad1d3222f6f102 427 Gene3D G3DSA:1.10.3720.10 171 425 7.7E-65 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3249 369b617c2b4ba7a142ad1d3222f6f102 427 Gene3D G3DSA:1.20.58.370 68 159 1.1E-6 T 17-10-2018 IPR035277 MalF, N-terminal FORC55_3249 369b617c2b4ba7a142ad1d3222f6f102 427 SUPERFAMILY SSF160964 79 179 3.14E-14 T 17-10-2018 FORC55_3249 369b617c2b4ba7a142ad1d3222f6f102 427 SUPERFAMILY SSF161098 175 411 2.49E-56 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3249 369b617c2b4ba7a142ad1d3222f6f102 427 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 211 413 1.7E-26 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2548 f674335c68e9307ff3b48304bad0d8f9 260 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 71 154 1.8E-17 T 17-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif FORC55_2548 f674335c68e9307ff3b48304bad0d8f9 260 Gene3D G3DSA:3.90.550.20 77 230 6.5E-16 T 17-10-2018 FORC55_2548 f674335c68e9307ff3b48304bad0d8f9 260 SUPERFAMILY SSF53448 14 258 8.62E-36 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82866 782 1008 1.96E-47 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:1.20.1640.10 501 1001 4.0E-288 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.2090.10 178 268 4.0E-288 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.70.1430 555 647 4.0E-288 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.70.1440 648 843 4.0E-288 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82714 701 783 7.85E-18 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 5.0E-74 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.2090.10 698 786 4.0E-288 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 2.9E-275 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82693 553 650 7.85E-20 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.70.1320 134 325 4.0E-288 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82866 290 489 2.22E-47 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82693 136 323 3.79E-21 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82714 182 263 1.83E-16 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.70.1430 40 794 4.0E-288 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82693 41 130 3.66E-23 T 17-10-2018 FORC55_2632 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:1.20.1640.10 10 500 4.0E-288 T 17-10-2018 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 2.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 2.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 2.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 Gene3D G3DSA:1.10.10.10 808 898 3.4E-18 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 SUPERFAMILY SSF46894 831 895 9.52E-17 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.561 T 17-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 SUPERFAMILY SSF52540 17 228 1.28E-9 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 Gene3D G3DSA:3.40.50.300 9 167 3.5E-6 T 17-10-2018 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 SMART SM00421 836 893 1.6E-18 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 2.7E-19 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 Gene3D G3DSA:1.25.40.10 441 807 8.8E-81 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2700 dfdc94404718c77e884d9966b54db03f 902 SUPERFAMILY SSF48452 443 805 1.74E-159 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2568 ce9b69062c17b38967f0b878895203fb 196 SUPERFAMILY SSF48498 81 191 6.52E-10 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily FORC55_2568 ce9b69062c17b38967f0b878895203fb 196 Gene3D G3DSA:1.10.357.10 3 196 1.9E-80 T 17-10-2018 FORC55_2568 ce9b69062c17b38967f0b878895203fb 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.963 T 17-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 FORC55_2568 ce9b69062c17b38967f0b878895203fb 196 SUPERFAMILY SSF46689 5 78 2.24E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2568 ce9b69062c17b38967f0b878895203fb 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 2.4E-10 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 5.4E-17 T 17-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 Pfam PF02938 GAD domain 307 406 1.7E-31 T 17-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 7.6E-106 T 17-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 SUPERFAMILY SSF55681 108 582 1.05E-102 T 17-10-2018 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 Gene3D G3DSA:3.30.1360.30 271 420 1.5E-197 T 17-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 Gene3D G3DSA:3.30.930.10 118 578 1.5E-197 T 17-10-2018 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 SUPERFAMILY SSF55261 288 419 7.19E-47 T 17-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.392 T 17-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 582 3.8E-265 T 17-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1617 e088ce49e970912f6d6d590c61620940 591 SUPERFAMILY SSF50249 1 105 1.68E-33 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1617 e088ce49e970912f6d6d590c61620940 591 Gene3D G3DSA:2.40.50.140 1 106 8.4E-35 T 17-10-2018 FORC55_1283 203b4be9e0940b4f2f6848bd7ebfe0ac 206 SUPERFAMILY SSF74653 118 196 1.44E-24 T 17-10-2018 FORC55_1283 203b4be9e0940b4f2f6848bd7ebfe0ac 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.7E-12 T 17-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 FORC55_1283 203b4be9e0940b4f2f6848bd7ebfe0ac 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.7E-12 T 17-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 FORC55_1283 203b4be9e0940b4f2f6848bd7ebfe0ac 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.7E-12 T 17-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 FORC55_1283 203b4be9e0940b4f2f6848bd7ebfe0ac 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 205 4.4E-19 T 17-10-2018 IPR006260 TonB/TolA, C-terminal FORC55_1283 203b4be9e0940b4f2f6848bd7ebfe0ac 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 2.3E-19 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 FORC55_1283 203b4be9e0940b4f2f6848bd7ebfe0ac 206 Gene3D G3DSA:3.30.1150.10 103 206 4.1E-29 T 17-10-2018 FORC55_3403 4ad8e68d5572632a48785dca51bb8169 473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 232 261 2.6E-24 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3403 4ad8e68d5572632a48785dca51bb8169 473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 338 367 2.6E-24 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3403 4ad8e68d5572632a48785dca51bb8169 473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 309 336 2.6E-24 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3403 4ad8e68d5572632a48785dca51bb8169 473 SMART SM00283 211 472 5.1E-55 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3403 4ad8e68d5572632a48785dca51bb8169 473 Gene3D G3DSA:1.10.287.950 147 473 5.2E-64 T 17-10-2018 FORC55_3403 4ad8e68d5572632a48785dca51bb8169 473 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 437 4.0E-39 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3403 4ad8e68d5572632a48785dca51bb8169 473 SUPERFAMILY SSF58104 163 472 1.96E-66 T 17-10-2018 FORC55_1910 9e29c3c159774851d0b44c9eaac70a4b 294 Gene3D G3DSA:3.40.50.10330 23 289 2.5E-92 T 17-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 FORC55_1910 9e29c3c159774851d0b44c9eaac70a4b 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.341 T 17-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 FORC55_1910 9e29c3c159774851d0b44c9eaac70a4b 294 SUPERFAMILY SSF111331 8 290 1.44E-91 T 17-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily FORC55_1910 9e29c3c159774851d0b44c9eaac70a4b 294 Pfam PF01513 ATP-NAD kinase 8 273 1.1E-70 T 17-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 FORC55_1910 9e29c3c159774851d0b44c9eaac70a4b 294 Gene3D G3DSA:2.60.200.30 129 266 2.5E-92 T 17-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 SUPERFAMILY SSF51905 2 313 2.04E-52 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.4E-38 T 17-10-2018 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.4E-38 T 17-10-2018 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-38 T 17-10-2018 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.4E-38 T 17-10-2018 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.4E-38 T 17-10-2018 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 Gene3D G3DSA:3.50.50.60 10 312 2.7E-128 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.2E-124 T 17-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.9E-76 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 Gene3D G3DSA:3.50.50.60 118 244 2.7E-128 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 17-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 FORC55_1603 3eae478b2d7f2e1c74eb1049c40c7d76 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 3.4E-49 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_3437 609b7d75936b352099138afd497164c9 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 17-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 FORC55_3437 609b7d75936b352099138afd497164c9 96 Gene3D G3DSA:2.30.33.40 1 96 2.3E-32 T 17-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 FORC55_3437 609b7d75936b352099138afd497164c9 96 SMART SM00883 2 95 1.5E-39 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_3437 609b7d75936b352099138afd497164c9 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.741 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_3437 609b7d75936b352099138afd497164c9 96 PRINTS PR00297 10kDa chaperonin signature 82 95 4.7E-25 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_3437 609b7d75936b352099138afd497164c9 96 PRINTS PR00297 10kDa chaperonin signature 3 18 4.7E-25 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_3437 609b7d75936b352099138afd497164c9 96 PRINTS PR00297 10kDa chaperonin signature 25 46 4.7E-25 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_3437 609b7d75936b352099138afd497164c9 96 PRINTS PR00297 10kDa chaperonin signature 60 72 4.7E-25 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_3437 609b7d75936b352099138afd497164c9 96 SUPERFAMILY SSF50129 1 96 7.77E-28 T 17-10-2018 IPR011032 GroES-like superfamily FORC55_3437 609b7d75936b352099138afd497164c9 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.3E-29 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 FORC55_0999 35ddb5e42e316e6a611be5104b3556cb 356 Pfam PF06519 TolA C-terminal 254 353 3.3E-34 T 17-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 FORC55_0999 35ddb5e42e316e6a611be5104b3556cb 356 Gene3D G3DSA:3.30.1150.10 254 356 1.7E-27 T 17-10-2018 FORC55_0999 35ddb5e42e316e6a611be5104b3556cb 356 SUPERFAMILY SSF74653 263 356 1.79E-14 T 17-10-2018 FORC55_0999 35ddb5e42e316e6a611be5104b3556cb 356 TIGRFAM TIGR02794 tolA_full: protein TolA 13 355 3.4E-91 T 17-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 SUPERFAMILY SSF48452 160 358 8.81E-15 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 Gene3D G3DSA:1.25.40.10 283 450 9.8E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 Gene3D G3DSA:1.25.40.10 35 282 4.9E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 Pfam PF13424 Tetratricopeptide repeat 249 312 1.9E-7 T 17-10-2018 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 SMART SM00028 83 116 110.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 SMART SM00028 249 282 19.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 SMART SM00028 289 322 0.034 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 SMART SM00028 329 362 410.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1869 694a0bc06603a21d85aec5c5ca7a8e2b 753 SMART SM00028 409 442 210.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.235 T 17-10-2018 IPR016496 GTPase HflX GO:0005525 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 7.7E-21 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 3.0E-31 T 17-10-2018 IPR025121 GTPase HflX, N-terminal FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 17-10-2018 IPR032305 GTP-binding protein, middle domain FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 Gene3D G3DSA:3.40.50.11060 18 138 2.3E-37 T 17-10-2018 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 Gene3D G3DSA:3.40.50.300 197 371 4.4E-43 T 17-10-2018 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 SUPERFAMILY SSF54980 365 428 8.63E-17 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 4.0E-156 T 17-10-2018 IPR016496 GTPase HflX GO:0005525 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 SUPERFAMILY SSF52540 197 370 1.03E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 PIRSF PIRSF006809 3 422 6.9E-150 T 17-10-2018 IPR016496 GTPase HflX GO:0005525 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_2436 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0334 757a6696452c60afdd5f089f7e5b9a30 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 4.7E-66 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_0334 757a6696452c60afdd5f089f7e5b9a30 212 SUPERFAMILY SSF55068 3 207 2.88E-81 T 17-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_0334 757a6696452c60afdd5f089f7e5b9a30 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 5.3E-67 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_0334 757a6696452c60afdd5f089f7e5b9a30 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 37.917 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_0334 757a6696452c60afdd5f089f7e5b9a30 212 Gene3D G3DSA:3.30.1060.10 3 211 3.2E-89 T 17-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 SUPERFAMILY SSF55785 23 114 1.1E-23 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 Gene3D G3DSA:1.10.287.950 194 514 1.2E-61 T 17-10-2018 FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 SUPERFAMILY SSF58104 219 514 1.7E-66 T 17-10-2018 FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 Pfam PF08447 PAS fold 32 114 3.2E-19 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 110 5.6E-11 T 17-10-2018 IPR000014 PAS domain FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 296 480 1.3E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 408 2.4E-7 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 266 295 2.4E-7 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 Gene3D G3DSA:3.30.450.20 2 116 8.6E-22 T 17-10-2018 FORC55_3572 e1b8dfefb71d1194c9caec6df3eb0e8f 515 SMART SM00283 252 513 1.1E-65 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0455 8eec02f54b3a0a76aafbe0a3de483eec 172 SUPERFAMILY SSF52218 1 168 2.67E-48 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0455 8eec02f54b3a0a76aafbe0a3de483eec 172 PIRSF PIRSF038996 1 171 2.7E-56 T 17-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 FORC55_0455 8eec02f54b3a0a76aafbe0a3de483eec 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 7.5E-67 T 17-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 FORC55_0455 8eec02f54b3a0a76aafbe0a3de483eec 172 Gene3D G3DSA:3.40.50.360 1 172 1.9E-48 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0455 8eec02f54b3a0a76aafbe0a3de483eec 172 Pfam PF00258 Flavodoxin 5 160 1.2E-25 T 17-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 FORC55_0455 8eec02f54b3a0a76aafbe0a3de483eec 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 17-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 FORC55_3582 72b3821c4a0680319e94776e26864cfb 209 Pfam PF01810 LysE type translocator 16 205 2.2E-28 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_3582 72b3821c4a0680319e94776e26864cfb 209 PIRSF PIRSF006324 1 208 3.0E-53 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_1964 da7f675fae9f60698a4000280487105f 279 Pfam PF00005 ABC transporter 37 184 5.1E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1964 da7f675fae9f60698a4000280487105f 279 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1964 da7f675fae9f60698a4000280487105f 279 SMART SM00382 45 233 9.2E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1964 da7f675fae9f60698a4000280487105f 279 SUPERFAMILY SSF52540 17 246 6.37E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1964 da7f675fae9f60698a4000280487105f 279 Gene3D G3DSA:3.40.50.300 20 273 2.8E-63 T 17-10-2018 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Gene3D G3DSA:1.10.132.30 641 790 1.9E-65 T 17-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Gene3D G3DSA:2.40.50.100 1022 1126 3.6E-30 T 17-10-2018 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.8E-19 T 17-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Gene3D G3DSA:1.10.1790.20 1135 1313 1.4E-63 T 17-10-2018 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.2E-76 T 17-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Gene3D G3DSA:2.40.50.100 1151 1214 1.4E-63 T 17-10-2018 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.0E-27 T 17-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Gene3D G3DSA:2.40.50.100 948 1021 2.7E-25 T 17-10-2018 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 17-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 17-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 SUPERFAMILY SSF64484 16 1362 0.0 T 17-10-2018 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 17-10-2018 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 17-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.981 T 17-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 SMART SM00663 235 514 1.1E-184 T 17-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Gene3D G3DSA:1.10.274.100 490 640 1.1E-40 T 17-10-2018 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.3E-88 T 17-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2455 b7b3cd830834f2fa2cb291cf2afe727a 1401 Gene3D G3DSA:1.10.150.390 1315 1377 1.1E-28 T 17-10-2018 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Gene3D G3DSA:3.40.120.10 175 363 6.9E-61 T 17-10-2018 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 6.4E-18 T 17-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 5.3E-207 T 17-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 SUPERFAMILY SSF53738 4 182 5.1E-48 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.3E-44 T 17-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 SUPERFAMILY SSF53738 157 257 7.06E-29 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Gene3D G3DSA:3.30.310.50 371 446 2.6E-25 T 17-10-2018 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Gene3D G3DSA:3.40.120.10 4 155 4.5E-48 T 17-10-2018 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.9E-13 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.9E-13 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.9E-13 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 17-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 1.7E-30 T 17-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 SUPERFAMILY SSF53738 259 366 6.28E-29 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Gene3D G3DSA:3.40.120.10 258 340 6.9E-61 T 17-10-2018 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 SUPERFAMILY SSF55957 358 445 2.09E-22 T 17-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.98 T 17-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2184 e83ed74c86c126ef753be59b44d37405 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 1.9E-12 T 17-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_0595 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.1 T 17-10-2018 IPR011605 NusB antitermination factor GO:0006353 FORC55_0595 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Gene3D G3DSA:1.10.940.10 3 156 1.6E-47 T 17-10-2018 IPR035926 NusB-like superfamily FORC55_0595 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 SUPERFAMILY SSF48013 7 153 8.37E-39 T 17-10-2018 IPR035926 NusB-like superfamily FORC55_0595 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 3.6E-42 T 17-10-2018 IPR011605 NusB antitermination factor GO:0006353 FORC55_0595 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Pfam PF01029 NusB family 11 149 1.1E-35 T 17-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 17-10-2018 FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 SUPERFAMILY SSF47413 12 70 2.06E-16 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 Pfam PF13377 Periplasmic binding protein-like domain 179 339 8.4E-26 T 17-10-2018 FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 SMART SM00354 12 82 1.3E-26 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 Gene3D G3DSA:3.40.50.2300 74 318 1.6E-74 T 17-10-2018 FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 Gene3D G3DSA:3.40.50.2300 168 301 1.6E-74 T 17-10-2018 FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 5.2E-18 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 SUPERFAMILY SSF53822 70 324 4.71E-45 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_2830 251faac0da8fbfee5e8791d32cceee98 342 Gene3D G3DSA:1.10.260.40 4 70 2.1E-22 T 17-10-2018 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 62.865 T 17-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 Pfam PF07687 Peptidase dimerisation domain 174 285 2.1E-25 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 17-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 Gene3D G3DSA:3.30.70.360 177 292 5.2E-78 T 17-10-2018 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 SUPERFAMILY SSF53187 4 377 9.71E-54 T 17-10-2018 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 7.1E-124 T 17-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 17-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 7.7E-32 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 Gene3D G3DSA:3.40.630.10 25 360 5.2E-78 T 17-10-2018 FORC55_0240 9e7fc620732a19bf56aa4cf15bb60deb 378 SUPERFAMILY SSF55031 177 290 2.69E-23 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain FORC55_2959 85314b5e6f58355ecf05779bf7b66edd 273 Gene3D G3DSA:3.30.1240.10 82 195 3.8E-59 T 17-10-2018 FORC55_2959 85314b5e6f58355ecf05779bf7b66edd 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 267 1.5E-61 T 17-10-2018 FORC55_2959 85314b5e6f58355ecf05779bf7b66edd 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 239 1.5E-17 T 17-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 FORC55_2959 85314b5e6f58355ecf05779bf7b66edd 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 17-10-2018 FORC55_2959 85314b5e6f58355ecf05779bf7b66edd 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 17-10-2018 FORC55_2959 85314b5e6f58355ecf05779bf7b66edd 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 1.5E-53 T 17-10-2018 IPR000150 Cof family GO:0016787 FORC55_2959 85314b5e6f58355ecf05779bf7b66edd 273 Gene3D G3DSA:3.40.50.1000 3 267 3.8E-59 T 17-10-2018 IPR023214 HAD superfamily FORC55_2959 85314b5e6f58355ecf05779bf7b66edd 273 SUPERFAMILY SSF56784 1 271 5.31E-63 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_3430 0eb37b3c994bb01ddb971db5672f4c2f 485 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 46 199 1.1E-31 T 17-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal FORC55_3430 0eb37b3c994bb01ddb971db5672f4c2f 485 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 485 55.895 T 17-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 FORC55_3430 0eb37b3c994bb01ddb971db5672f4c2f 485 Gene3D G3DSA:2.70.50.50 24 202 6.3E-81 T 17-10-2018 FORC55_3430 0eb37b3c994bb01ddb971db5672f4c2f 485 Gene3D G3DSA:3.30.70.2150 209 316 6.5E-43 T 17-10-2018 FORC55_3430 0eb37b3c994bb01ddb971db5672f4c2f 485 SUPERFAMILY SSF81296 34 203 2.24E-54 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_3430 0eb37b3c994bb01ddb971db5672f4c2f 485 Gene3D G3DSA:2.60.40.2550 317 414 2.1E-47 T 17-10-2018 FORC55_1619 3938d22f1aa9b31864ca4b9155f142c5 242 SUPERFAMILY SSF53335 20 242 1.39E-40 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1619 3938d22f1aa9b31864ca4b9155f142c5 242 Pfam PF13649 Methyltransferase domain 60 158 4.7E-13 T 17-10-2018 FORC55_1619 3938d22f1aa9b31864ca4b9155f142c5 242 Gene3D G3DSA:3.40.50.150 18 242 1.4E-63 T 17-10-2018 FORC55_1619 3938d22f1aa9b31864ca4b9155f142c5 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.95 T 17-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 FORC55_1619 3938d22f1aa9b31864ca4b9155f142c5 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.1E-118 T 17-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 FORC55_1619 3938d22f1aa9b31864ca4b9155f142c5 242 PIRSF PIRSF006325 1 242 3.4E-128 T 17-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 FORC55_1305 fb631a253e0e96fcea5f3d5994b9cd66 277 PIRSF PIRSF015626 1 271 9.9E-105 T 17-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 FORC55_1305 fb631a253e0e96fcea5f3d5994b9cd66 277 Gene3D G3DSA:3.10.20.10 36 119 7.8E-10 T 17-10-2018 FORC55_1305 fb631a253e0e96fcea5f3d5994b9cd66 277 SUPERFAMILY SSF53927 15 267 1.59E-72 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 FORC55_1305 fb631a253e0e96fcea5f3d5994b9cd66 277 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 26.156 T 17-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 FORC55_1305 fb631a253e0e96fcea5f3d5994b9cd66 277 Pfam PF02634 FdhD/NarQ family 35 266 2.0E-74 T 17-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 FORC55_1305 fb631a253e0e96fcea5f3d5994b9cd66 277 Gene3D G3DSA:3.40.140.10 122 274 7.3E-43 T 17-10-2018 FORC55_1948 7668710ca0a4d2ca21fccdc8d59df0e4 509 Gene3D G3DSA:3.40.1080.10 3 237 2.5E-99 T 17-10-2018 FORC55_1948 7668710ca0a4d2ca21fccdc8d59df0e4 509 SUPERFAMILY SSF100950 4 237 9.22E-77 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_1948 7668710ca0a4d2ca21fccdc8d59df0e4 509 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 42 506 5.6E-267 T 17-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 FORC55_1948 7668710ca0a4d2ca21fccdc8d59df0e4 509 PIRSF PIRSF009451 1 508 6.6E-268 T 17-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 FORC55_1948 7668710ca0a4d2ca21fccdc8d59df0e4 509 Gene3D G3DSA:3.40.1080.10 239 508 1.5E-124 T 17-10-2018 FORC55_1948 7668710ca0a4d2ca21fccdc8d59df0e4 509 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 37 507 2.8E-236 T 17-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 FORC55_1948 7668710ca0a4d2ca21fccdc8d59df0e4 509 SUPERFAMILY SSF100950 240 506 1.81E-62 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_0977 88bb662bdaea80dd0a17b10d712533d2 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 17-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 FORC55_0977 88bb662bdaea80dd0a17b10d712533d2 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 4.4E-100 T 17-10-2018 FORC55_0977 88bb662bdaea80dd0a17b10d712533d2 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 17-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 FORC55_0977 88bb662bdaea80dd0a17b10d712533d2 268 SUPERFAMILY SSF56219 1 268 9.42E-87 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily FORC55_0977 88bb662bdaea80dd0a17b10d712533d2 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.5E-20 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase FORC55_0977 88bb662bdaea80dd0a17b10d712533d2 268 Gene3D G3DSA:3.60.10.10 1 268 2.5E-81 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily FORC55_0977 88bb662bdaea80dd0a17b10d712533d2 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 268 1.0E-86 T 17-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 780 801 - T 17-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 SUPERFAMILY SSF53383 512 959 6.05E-112 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 Pfam PF00202 Aminotransferase class-III 50 464 1.7E-91 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 Gene3D G3DSA:3.90.1150.10 562 949 4.5E-135 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 Gene3D G3DSA:3.40.640.10 87 355 3.3E-129 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 Gene3D G3DSA:3.90.1150.10 39 462 3.3E-129 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 1.4E-155 T 17-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 Gene3D G3DSA:3.40.640.10 576 844 4.5E-135 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 Gene3D G3DSA:1.20.1650.10 463 561 4.4E-44 T 17-10-2018 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 893 6.6E-66 T 17-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 FORC55_1210 6ffcdc3e4d152254d7027bf7f948dcea 961 SUPERFAMILY SSF53383 42 464 1.38E-113 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2307 f1c1f61dd02d86102c81ff39d70188e7 287 Pfam PF00924 Mechanosensitive ion channel 77 274 4.9E-59 T 17-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 FORC55_2307 f1c1f61dd02d86102c81ff39d70188e7 287 Gene3D G3DSA:3.30.70.100 185 279 7.6E-31 T 17-10-2018 FORC55_2307 f1c1f61dd02d86102c81ff39d70188e7 287 Gene3D G3DSA:2.30.30.60 135 184 3.0E-21 T 17-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily FORC55_2307 f1c1f61dd02d86102c81ff39d70188e7 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 17-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 FORC55_2307 f1c1f61dd02d86102c81ff39d70188e7 287 SUPERFAMILY SSF82689 187 284 4.97E-35 T 17-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 FORC55_2307 f1c1f61dd02d86102c81ff39d70188e7 287 Pfam PF05552 Conserved TM helix 21 69 8.7E-11 T 17-10-2018 IPR008910 Conserved TM helix FORC55_2307 f1c1f61dd02d86102c81ff39d70188e7 287 SUPERFAMILY SSF50182 120 185 1.93E-16 T 17-10-2018 IPR010920 LSM domain superfamily FORC55_2307 f1c1f61dd02d86102c81ff39d70188e7 287 SUPERFAMILY SSF82861 33 118 4.05E-17 T 17-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 FORC55_2087 65957e6853d713fa568459d7cb5eb4f4 374 SUPERFAMILY SSF46689 29 141 1.27E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2087 65957e6853d713fa568459d7cb5eb4f4 374 Pfam PF13565 Homeodomain-like domain 60 138 4.8E-12 T 17-10-2018 FORC55_2087 65957e6853d713fa568459d7cb5eb4f4 374 Pfam PF13358 DDE superfamily endonuclease 182 332 1.6E-26 T 17-10-2018 IPR038717 Tc1-like transposase, DDE domain FORC55_2291 e6304a770c20c37676e689a31b760a92 267 Pfam PF00561 alpha/beta hydrolase fold 21 250 1.1E-17 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_2291 e6304a770c20c37676e689a31b760a92 267 PRINTS PR00412 Epoxide hydrolase signature 42 57 1.8E-7 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_2291 e6304a770c20c37676e689a31b760a92 267 PRINTS PR00412 Epoxide hydrolase signature 101 114 1.8E-7 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_2291 e6304a770c20c37676e689a31b760a92 267 PRINTS PR00412 Epoxide hydrolase signature 240 262 1.8E-7 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_2291 e6304a770c20c37676e689a31b760a92 267 Gene3D G3DSA:3.40.50.1820 2 266 7.4E-51 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2291 e6304a770c20c37676e689a31b760a92 267 SUPERFAMILY SSF53474 3 264 4.02E-56 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2291 e6304a770c20c37676e689a31b760a92 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 4.5E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_2291 e6304a770c20c37676e689a31b760a92 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 4.5E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_2291 e6304a770c20c37676e689a31b760a92 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 4.5E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_2291 e6304a770c20c37676e689a31b760a92 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 4.5E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_2419 77412db2b33d2d38cccb07138569f4bd 64 SUPERFAMILY SSF50249 2 63 5.48E-13 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2419 77412db2b33d2d38cccb07138569f4bd 64 PIRSF PIRSF003135 1 64 3.1E-25 T 17-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 FORC55_2419 77412db2b33d2d38cccb07138569f4bd 64 Gene3D G3DSA:2.40.50.140 1 64 4.3E-15 T 17-10-2018 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 Gene3D G3DSA:1.10.274.10 190 314 1.7E-57 T 17-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 SUPERFAMILY SSF52009 293 413 1.02E-26 T 17-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 424 706 2.6E-93 T 17-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 SUPERFAMILY SSF47831 202 311 9.29E-27 T 17-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 SMART SM00065 17 163 2.7E-21 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 SUPERFAMILY SSF51621 419 714 1.2E-96 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 17-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 728 5.0E-134 T 17-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 2.2E-23 T 17-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 3.5E-16 T 17-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 Gene3D G3DSA:3.50.30.10 173 399 1.7E-57 T 17-10-2018 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 17-10-2018 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 17-10-2018 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 17-10-2018 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 17-10-2018 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 Gene3D G3DSA:3.30.450.40 1 162 4.9E-42 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 Gene3D G3DSA:3.20.20.60 400 739 1.6E-103 T 17-10-2018 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 17-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 SUPERFAMILY SSF55781 2 158 6.32E-32 T 17-10-2018 FORC55_2064 e7a0da35c72ece6248912edaa0f0520f 748 Pfam PF01590 GAF domain 20 151 1.3E-13 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 Pfam PF08345 Flagellar M-ring protein C-terminal 282 452 3.5E-41 T 17-10-2018 IPR013556 Flagellar M-ring C-terminal FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PIRSF PIRSF004862 30 580 9.3E-160 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 Gene3D G3DSA:3.30.300.30 152 247 2.0E-9 T 17-10-2018 FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 150 168 1.9E-24 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 182 196 1.9E-24 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 375 399 1.9E-24 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 225 243 1.9E-24 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 295 313 1.9E-24 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 Pfam PF01514 Secretory protein of YscJ/FliF family 63 249 1.5E-55 T 17-10-2018 IPR006182 Secretory protein YscJ/FliF FORC55_0718 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 2.1E-77 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 FORC55_3463 750caec0068909f909d972116de5e90c 307 SUPERFAMILY SSF51430 9 298 1.57E-69 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily FORC55_3463 750caec0068909f909d972116de5e90c 307 Pfam PF00248 Aldo/keto reductase family 21 296 1.2E-57 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain FORC55_3463 750caec0068909f909d972116de5e90c 307 Gene3D G3DSA:3.20.20.100 3 307 7.4E-99 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily FORC55_3463 750caec0068909f909d972116de5e90c 307 PRINTS PR00069 Aldo-keto reductase signature 119 137 2.3E-5 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 FORC55_3463 750caec0068909f909d972116de5e90c 307 PRINTS PR00069 Aldo-keto reductase signature 150 167 2.3E-5 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 FORC55_2642 80f6b8727687cfd35ab4d7ed393fc873 301 Gene3D G3DSA:3.40.190.290 93 289 1.7E-15 T 17-10-2018 FORC55_2642 80f6b8727687cfd35ab4d7ed393fc873 301 SUPERFAMILY SSF46785 5 86 1.09E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2642 80f6b8727687cfd35ab4d7ed393fc873 301 Gene3D G3DSA:1.10.10.10 1 89 2.1E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2642 80f6b8727687cfd35ab4d7ed393fc873 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.0E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2642 80f6b8727687cfd35ab4d7ed393fc873 301 SUPERFAMILY SSF53850 89 288 1.32E-22 T 17-10-2018 FORC55_2642 80f6b8727687cfd35ab4d7ed393fc873 301 Pfam PF03466 LysR substrate binding domain 89 288 4.1E-20 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2238 45d450c8b3b2ce185d2486f88d86e7b7 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 33.769 T 17-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 FORC55_2238 45d450c8b3b2ce185d2486f88d86e7b7 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 17-10-2018 FORC55_2238 45d450c8b3b2ce185d2486f88d86e7b7 196 Pfam PF13580 SIS domain 9 144 1.4E-34 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_2238 45d450c8b3b2ce185d2486f88d86e7b7 196 Gene3D G3DSA:3.40.50.10490 1 195 3.7E-71 T 17-10-2018 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 Gene3D G3DSA:3.40.50.300 1 214 2.7E-78 T 17-10-2018 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 SUPERFAMILY SSF52540 1 213 4.57E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 17-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.4E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.4E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.4E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.4E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.4E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.9E-75 T 17-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.2E-14 T 17-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.28 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 FORC55_1790 7e28267650f4546bb85eda4cc3951b74 214 Pfam PF00406 Adenylate kinase 5 185 5.7E-60 T 17-10-2018 FORC55_1986 903594363bcc3f681d4e034f81dd7b00 373 SUPERFAMILY SSF102114 105 332 2.09E-13 T 17-10-2018 FORC55_1986 903594363bcc3f681d4e034f81dd7b00 373 Gene3D G3DSA:3.20.20.70 68 338 1.2E-111 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1986 903594363bcc3f681d4e034f81dd7b00 373 PIRSF PIRSF006004 3 366 3.0E-144 T 17-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 FORC55_1986 903594363bcc3f681d4e034f81dd7b00 373 Pfam PF04055 Radical SAM superfamily 109 285 2.7E-15 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_1986 903594363bcc3f681d4e034f81dd7b00 373 Gene3D G3DSA:1.10.150.530 1 67 1.4E-25 T 17-10-2018 FORC55_1986 903594363bcc3f681d4e034f81dd7b00 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 3.4E-160 T 17-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 FORC55_1986 903594363bcc3f681d4e034f81dd7b00 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.685 T 17-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 FORC55_1692 b992a7f0d334e14bd356a41d4a2bd64f 543 SUPERFAMILY SSF53850 40 529 1.57E-155 T 17-10-2018 FORC55_1692 b992a7f0d334e14bd356a41d4a2bd64f 543 Gene3D G3DSA:3.40.190.10 42 524 6.9E-199 T 17-10-2018 FORC55_1692 b992a7f0d334e14bd356a41d4a2bd64f 543 Gene3D G3DSA:3.90.76.10 72 195 6.9E-199 T 17-10-2018 FORC55_1692 b992a7f0d334e14bd356a41d4a2bd64f 543 PIRSF PIRSF002741 1 543 5.7E-125 T 17-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 FORC55_1692 b992a7f0d334e14bd356a41d4a2bd64f 543 Gene3D G3DSA:3.10.105.10 297 512 6.9E-199 T 17-10-2018 FORC55_1692 b992a7f0d334e14bd356a41d4a2bd64f 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 463 5.3E-100 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_1692 b992a7f0d334e14bd356a41d4a2bd64f 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 17-10-2018 IPR023765 Solute-binding protein family 5, conserved site FORC55_0759 e619e882d64e47e91ba33b805aa0b62a 236 SUPERFAMILY SSF46548 105 232 6.45E-40 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_0759 e619e882d64e47e91ba33b805aa0b62a 236 Gene3D G3DSA:1.10.1060.10 105 236 2.4E-56 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_0759 e619e882d64e47e91ba33b805aa0b62a 236 Gene3D G3DSA:3.10.20.30 1 104 2.5E-32 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_0759 e619e882d64e47e91ba33b805aa0b62a 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_0759 e619e882d64e47e91ba33b805aa0b62a 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.4E-10 T 17-10-2018 FORC55_0759 e619e882d64e47e91ba33b805aa0b62a 236 SUPERFAMILY SSF54292 1 104 1.28E-28 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 FORC55_0759 e619e882d64e47e91ba33b805aa0b62a 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 3.1E-29 T 17-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0759 e619e882d64e47e91ba33b805aa0b62a 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 17-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_2847 4e61d29d954f869b01a4bd9272ff2940 238 PIRSF PIRSF029033 1 238 3.9E-121 T 17-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein FORC55_2847 4e61d29d954f869b01a4bd9272ff2940 238 Gene3D G3DSA:3.30.110.170 43 210 1.6E-11 T 17-10-2018 FORC55_2847 4e61d29d954f869b01a4bd9272ff2940 238 Pfam PF04402 Protein of unknown function (DUF541) 41 211 8.3E-16 T 17-10-2018 IPR007497 Protein of unknown function DUF541 FORC55_2847 4e61d29d954f869b01a4bd9272ff2940 238 Gene3D G3DSA:3.30.70.2970 53 168 1.6E-11 T 17-10-2018 FORC55_1334 48635a88db421b9975f1fa2b4aeaaa74 66 Gene3D G3DSA:3.40.30.10 1 66 1.7E-11 T 17-10-2018 FORC55_1334 48635a88db421b9975f1fa2b4aeaaa74 66 SUPERFAMILY SSF52833 2 60 3.73E-5 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_1334 48635a88db421b9975f1fa2b4aeaaa74 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 58 2.7E-10 T 17-10-2018 IPR008554 Glutaredoxin-like FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 Gene3D G3DSA:1.25.40.10 17 103 2.4E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 SUPERFAMILY SSF81901 39 273 1.8E-20 T 17-10-2018 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.459 T 17-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 Gene3D G3DSA:1.25.40.10 178 351 1.4E-17 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 Gene3D G3DSA:1.25.40.10 104 177 2.1E-5 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 180 213 0.43 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 141 174 120.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 69 102 81.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 249 282 220.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 214 247 0.25 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0916 f25189b384560aba6ba7f04fbbcbd812 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.021 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0223 c0351f1a9e7b1f034531f06eaaea0710 205 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.9E-7 T 17-10-2018 FORC55_0223 c0351f1a9e7b1f034531f06eaaea0710 205 Gene3D G3DSA:1.10.10.10 2 86 6.0E-10 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0223 c0351f1a9e7b1f034531f06eaaea0710 205 SUPERFAMILY SSF46785 4 183 9.42E-38 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0263 ed4cc6201e1761555b36c17a25b22fa2 869 SUPERFAMILY SSF74853 39 132 1.7E-6 T 17-10-2018 IPR036415 Lamin tail domain superfamily FORC55_0263 ed4cc6201e1761555b36c17a25b22fa2 869 Pfam PF00932 Lamin Tail Domain 26 134 3.7E-15 T 17-10-2018 IPR001322 Lamin tail domain FORC55_0263 ed4cc6201e1761555b36c17a25b22fa2 869 SUPERFAMILY SSF56219 473 845 4.75E-29 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily FORC55_1400 ae97664d4d5d7c367d618759343c9a7c 484 SUPERFAMILY SSF56954 17 480 8.37E-89 T 17-10-2018 FORC55_1400 ae97664d4d5d7c367d618759343c9a7c 484 Gene3D G3DSA:1.20.1600.10 68 478 3.5E-140 T 17-10-2018 FORC55_1400 ae97664d4d5d7c367d618759343c9a7c 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 478 5.9E-170 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 FORC55_1400 ae97664d4d5d7c367d618759343c9a7c 484 Pfam PF02321 Outer membrane efflux protein 77 267 3.0E-16 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_1400 ae97664d4d5d7c367d618759343c9a7c 484 Pfam PF02321 Outer membrane efflux protein 300 475 2.3E-23 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_1400 ae97664d4d5d7c367d618759343c9a7c 484 Gene3D G3DSA:2.20.200.10 113 363 3.5E-140 T 17-10-2018 FORC55_0104 504909ce0fe11d45495fac95e456a56e 232 Gene3D G3DSA:3.30.450.40 42 218 1.1E-37 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_0104 504909ce0fe11d45495fac95e456a56e 232 Pfam PF04340 Protein of unknown function, DUF484 5 221 3.9E-86 T 17-10-2018 IPR007435 Protein of unknown function DUF484 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 SUPERFAMILY SSF51905 15 382 3.4E-28 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 Gene3D G3DSA:3.50.50.60 15 376 2.9E-137 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 391 503 2.6E-12 T 17-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 19 36 - T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 Gene3D G3DSA:1.10.8.870 398 470 9.5E-23 T 17-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 Gene3D G3DSA:3.30.9.10 92 330 2.9E-137 T 17-10-2018 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 37 5.2E-28 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 5.2E-28 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 43 55 5.2E-28 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 5.2E-28 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 14 26 5.2E-28 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 88 100 5.2E-28 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 FORC55_3303 edf9da48a57380255e6eeeb039ceba36 512 Pfam PF01266 FAD dependent oxidoreductase 15 333 7.2E-45 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 SUPERFAMILY SSF53448 1 249 2.71E-63 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 Gene3D G3DSA:3.90.550.10 1 224 2.4E-67 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 1.5E-209 T 17-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 2.7E-9 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 295 4.6E-6 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 347 5.1E-5 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 Gene3D G3DSA:2.160.10.10 225 453 2.9E-73 T 17-10-2018 FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 Pfam PF12804 MobA-like NTP transferase domain 6 127 4.4E-22 T 17-10-2018 IPR025877 MobA-like NTP transferase FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 SUPERFAMILY SSF51161 252 434 2.02E-52 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_2644 c15ad18fbae2a838e55b90fb2e39b455 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.833 T 17-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 FORC55_1608 46c6f605c1ad2c766f87d087f2074c05 290 Gene3D G3DSA:1.10.150.650 98 169 5.6E-81 T 17-10-2018 FORC55_1608 46c6f605c1ad2c766f87d087f2074c05 290 SMART SM00481 3 70 1.0E-15 T 17-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal FORC55_1608 46c6f605c1ad2c766f87d087f2074c05 290 SUPERFAMILY SSF89550 1 275 2.35E-52 T 17-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 FORC55_1608 46c6f605c1ad2c766f87d087f2074c05 290 Pfam PF02811 PHP domain 4 181 3.9E-7 T 17-10-2018 IPR004013 PHP domain GO:0003824 FORC55_1608 46c6f605c1ad2c766f87d087f2074c05 290 Gene3D G3DSA:3.20.20.140 3 250 5.6E-81 T 17-10-2018 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 SUPERFAMILY SSF52518 577 794 2.44E-53 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 Gene3D G3DSA:3.40.50.11610 724 930 4.8E-173 T 17-10-2018 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 4.1E-66 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 17-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.0E-13 T 17-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 Gene3D G3DSA:3.40.50.12470 557 803 4.8E-173 T 17-10-2018 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 SUPERFAMILY SSF52518 122 532 1.1E-87 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 SMART SM00861 594 787 3.0E-63 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 Gene3D G3DSA:3.40.50.970 168 534 4.0E-146 T 17-10-2018 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 Gene3D G3DSA:1.10.287.1150 85 167 2.0E-30 T 17-10-2018 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 PIRSF PIRSF000157 1 935 0.0 T 17-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 Pfam PF00676 Dehydrogenase E1 component 223 517 2.0E-49 T 17-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 FORC55_0760 e7f0c7d44442dcf6ddea429409e03dd4 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.0E-53 T 17-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 Gene3D G3DSA:3.40.50.620 15 231 1.5E-68 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 Pfam PF11734 TilS substrate C-terminal domain 364 430 1.9E-21 T 17-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 305 22.958 T 17-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 SUPERFAMILY SSF56037 321 433 4.71E-27 T 17-10-2018 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 201 6.6E-53 T 17-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 Pfam PF09179 TilS substrate binding domain 246 313 1.1E-18 T 17-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 SUPERFAMILY SSF82829 232 317 7.98E-24 T 17-10-2018 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 SMART SM00977 362 431 8.8E-23 T 17-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 Pfam PF01171 PP-loop family 20 198 1.3E-61 T 17-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 408 1.0E-15 T 17-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 Gene3D G3DSA:1.20.59.20 232 316 4.6E-28 T 17-10-2018 FORC55_0618 d22802c5c3104241f2285a8c49d28c35 440 SUPERFAMILY SSF52402 15 230 6.05E-62 T 17-10-2018 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.5E-21 T 17-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 Gene3D G3DSA:3.40.50.300 90 285 6.3E-123 T 17-10-2018 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 SMART SM00962 100 296 2.0E-116 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 9.7E-180 T 17-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.1E-75 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 Pfam PF02978 Signal peptide binding domain 329 427 4.4E-34 T 17-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 SUPERFAMILY SSF47446 329 430 1.8E-38 T 17-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 Gene3D G3DSA:1.20.120.140 4 305 6.3E-123 T 17-10-2018 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 SMART SM00382 99 301 1.7E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 SMART SM00963 1 86 3.9E-36 T 17-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 Gene3D G3DSA:1.10.260.30 328 451 6.6E-46 T 17-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.187 T 17-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 FORC55_2256 7329ac3b9f1c2f687deb409813c601be 461 SUPERFAMILY SSF52540 42 353 1.22E-57 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 SUPERFAMILY SSF55785 30 131 1.1E-23 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 Gene3D G3DSA:1.10.287.950 249 432 1.2E-44 T 17-10-2018 FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 SMART SM00283 239 430 9.1E-21 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 Gene3D G3DSA:3.30.450.20 125 248 2.8E-21 T 17-10-2018 FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 Gene3D G3DSA:3.30.450.20 5 124 5.2E-21 T 17-10-2018 FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 429 1.5E-37 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 Pfam PF13426 PAS domain 153 253 3.7E-11 T 17-10-2018 IPR000014 PAS domain FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 SUPERFAMILY SSF58104 231 430 9.68E-53 T 17-10-2018 FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 SMART SM00086 92 134 0.12 T 17-10-2018 IPR001610 PAC motif FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 SMART SM00086 212 254 0.032 T 17-10-2018 IPR001610 PAC motif FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 SUPERFAMILY SSF55785 153 252 1.93E-21 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 SMART SM00091 139 207 0.16 T 17-10-2018 IPR000014 PAS domain FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 SMART SM00091 17 87 0.55 T 17-10-2018 IPR000014 PAS domain FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 137 4.2E-17 T 17-10-2018 IPR000014 PAS domain FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 254 1.4E-14 T 17-10-2018 IPR000014 PAS domain FORC55_1403 474a967d1768b75bcd3fafa05286765e 432 Pfam PF08447 PAS fold 42 127 5.1E-12 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 FORC55_2057 6c6a4b650beaa41462799be7d4f7eaf7 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 3.4E-31 T 17-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2057 6c6a4b650beaa41462799be7d4f7eaf7 86 Pfam PF01649 Ribosomal protein S20 2 84 8.3E-28 T 17-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2057 6c6a4b650beaa41462799be7d4f7eaf7 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 4.0E-36 T 17-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2057 6c6a4b650beaa41462799be7d4f7eaf7 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.341 T 17-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2057 6c6a4b650beaa41462799be7d4f7eaf7 86 SUPERFAMILY SSF46992 3 86 2.49E-32 T 17-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2057 6c6a4b650beaa41462799be7d4f7eaf7 86 Gene3D G3DSA:1.20.58.110 1 86 1.3E-29 T 17-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0310 9e39e2df7f54c6cba7a37a876bbb32f9 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.0E-32 T 17-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0310 9e39e2df7f54c6cba7a37a876bbb32f9 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 17-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0310 9e39e2df7f54c6cba7a37a876bbb32f9 118 Gene3D G3DSA:1.10.8.50 1 71 4.6E-27 T 17-10-2018 FORC55_0310 9e39e2df7f54c6cba7a37a876bbb32f9 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.977 T 17-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0310 9e39e2df7f54c6cba7a37a876bbb32f9 118 SUPERFAMILY SSF46946 2 114 3.68E-45 T 17-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 FORC55_0310 9e39e2df7f54c6cba7a37a876bbb32f9 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.4E-53 T 17-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0310 9e39e2df7f54c6cba7a37a876bbb32f9 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 17-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0310 9e39e2df7f54c6cba7a37a876bbb32f9 118 PIRSF PIRSF002134 1 118 2.4E-41 T 17-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 SMART SM00632 477 554 1.1E-8 T 17-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 Pfam PF00128 Alpha amylase, catalytic domain 82 427 7.2E-61 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 Gene3D G3DSA:2.60.40.1180 468 552 4.4E-19 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 Gene3D G3DSA:3.20.20.80 38 467 5.5E-109 T 17-10-2018 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 SUPERFAMILY SSF51445 42 468 2.63E-84 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 SUPERFAMILY SSF49452 561 650 1.77E-23 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 SMART SM01065 561 655 4.8E-24 T 17-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 Pfam PF00686 Starch binding domain 563 653 5.2E-24 T 17-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 SUPERFAMILY SSF51011 474 552 3.6E-18 T 17-10-2018 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 SMART SM00642 49 465 4.1E-80 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_3243 a667ea621c32200add522b6d74f3cd5f 656 Gene3D G3DSA:2.60.40.10 560 655 4.4E-26 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2987 7b1104fd6552543ea845acc165796954 207 Gene3D G3DSA:2.60.120.10 93 205 5.2E-25 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_2987 7b1104fd6552543ea845acc165796954 207 SUPERFAMILY SSF47413 27 90 4.83E-15 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2987 7b1104fd6552543ea845acc165796954 207 Pfam PF01381 Helix-turn-helix 32 84 1.2E-12 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2987 7b1104fd6552543ea845acc165796954 207 Pfam PF07883 Cupin domain 145 204 6.4E-10 T 17-10-2018 IPR013096 Cupin 2, conserved barrel FORC55_2987 7b1104fd6552543ea845acc165796954 207 Gene3D G3DSA:1.10.260.40 26 92 1.4E-15 T 17-10-2018 FORC55_2987 7b1104fd6552543ea845acc165796954 207 SUPERFAMILY SSF51182 97 204 1.73E-25 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_2987 7b1104fd6552543ea845acc165796954 207 SMART SM00530 31 86 6.8E-13 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_0701 380749357f050f050fc0dbc11a799e22 115 SUPERFAMILY SSF52833 2 114 1.7E-36 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0701 380749357f050f050fc0dbc11a799e22 115 Gene3D G3DSA:3.40.30.10 2 115 1.4E-43 T 17-10-2018 FORC55_0701 380749357f050f050fc0dbc11a799e22 115 Pfam PF03960 ArsC family 6 112 4.2E-19 T 17-10-2018 IPR006660 Arsenate reductase-like FORC55_0701 380749357f050f050fc0dbc11a799e22 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 3.0E-32 T 17-10-2018 IPR006504 Transcriptional regulator Spx/MgsR FORC55_0012 0fc56a6dd7ec15496576925f9cc146ff 82 SUPERFAMILY SSF64307 8 79 2.22E-24 T 17-10-2018 IPR036868 TusA-like domain superfamily FORC55_0012 0fc56a6dd7ec15496576925f9cc146ff 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.458 T 17-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 FORC55_0012 0fc56a6dd7ec15496576925f9cc146ff 82 Gene3D G3DSA:3.30.110.40 4 80 3.1E-28 T 17-10-2018 IPR036868 TusA-like domain superfamily FORC55_0012 0fc56a6dd7ec15496576925f9cc146ff 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 17-10-2018 IPR001455 TusA-like domain FORC55_0012 0fc56a6dd7ec15496576925f9cc146ff 82 Pfam PF01206 Sulfurtransferase TusA 10 79 2.8E-22 T 17-10-2018 IPR001455 TusA-like domain FORC55_3299 da5258631e87072b2d1824e2fc5f0293 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_3299 da5258631e87072b2d1824e2fc5f0293 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 2.5E-22 T 17-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 FORC55_3299 da5258631e87072b2d1824e2fc5f0293 479 Gene3D G3DSA:3.30.1360.60 1 78 7.2E-25 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_3299 da5258631e87072b2d1824e2fc5f0293 479 SUPERFAMILY SSF55604 6 82 8.63E-21 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_3299 da5258631e87072b2d1824e2fc5f0293 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.5E-13 T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_3299 da5258631e87072b2d1824e2fc5f0293 479 Pfam PF02378 Phosphotransferase system, EIIC 110 409 1.2E-49 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_3299 da5258631e87072b2d1824e2fc5f0293 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 2.9E-93 T 17-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 FORC55_3299 da5258631e87072b2d1824e2fc5f0293 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 464 1.1E-193 T 17-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 SUPERFAMILY SSF48179 191 343 5.02E-56 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 3.8E-46 T 17-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 Gene3D G3DSA:1.10.1040.10 201 344 4.5E-54 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 SUPERFAMILY SSF51735 15 190 2.19E-49 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 Gene3D G3DSA:3.40.50.720 3 199 1.2E-51 T 17-10-2018 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.8E-52 T 17-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.304 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 PIRSF PIRSF000114 10 344 3.7E-97 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 8.4E-43 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 8.4E-43 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 8.4E-43 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 8.4E-43 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 8.4E-43 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_0236 a848c11f9d5f6eba6e614643b0e1660d 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 8.4E-43 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_1517 e1d291b9f11ff2815fd5b9fc0784e6d7 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 4.3E-98 T 17-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit FORC55_1517 e1d291b9f11ff2815fd5b9fc0784e6d7 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 1.2E-105 T 17-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 FORC55_1517 e1d291b9f11ff2815fd5b9fc0784e6d7 427 PIRSF PIRSF006066 1 426 1.5E-72 T 17-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 FORC55_2272 8399215d0c6a8e754ebfa88f5afd5f19 168 SUPERFAMILY SSF142433 3 159 1.12E-53 T 17-10-2018 IPR036653 CinA-like, C-terminal FORC55_2272 8399215d0c6a8e754ebfa88f5afd5f19 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 157 5.9E-48 T 17-10-2018 IPR008136 CinA, C-terminal FORC55_2272 8399215d0c6a8e754ebfa88f5afd5f19 168 Gene3D G3DSA:3.90.950.20 1 160 3.7E-56 T 17-10-2018 IPR036653 CinA-like, C-terminal FORC55_2272 8399215d0c6a8e754ebfa88f5afd5f19 168 Pfam PF02464 Competence-damaged protein 5 158 4.2E-55 T 17-10-2018 IPR008136 CinA, C-terminal FORC55_1043 70872339ba6c5e8eaf05c3ae8d65eea1 234 SUPERFAMILY SSF46894 131 232 4.54E-26 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_1043 70872339ba6c5e8eaf05c3ae8d65eea1 234 SUPERFAMILY SSF52172 2 128 2.56E-36 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1043 70872339ba6c5e8eaf05c3ae8d65eea1 234 SMART SM00862 155 231 1.2E-18 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_1043 70872339ba6c5e8eaf05c3ae8d65eea1 234 Gene3D G3DSA:1.10.10.10 121 234 7.2E-31 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1043 70872339ba6c5e8eaf05c3ae8d65eea1 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.5E-20 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_1043 70872339ba6c5e8eaf05c3ae8d65eea1 234 SMART SM00448 3 113 8.6E-37 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1043 70872339ba6c5e8eaf05c3ae8d65eea1 234 Gene3D G3DSA:3.40.50.2300 1 120 1.3E-32 T 17-10-2018 FORC55_1043 70872339ba6c5e8eaf05c3ae8d65eea1 234 Pfam PF00072 Response regulator receiver domain 5 113 1.0E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3229 0610f771bb387ca2edbfaa8fbbc6c9e6 310 PIRSF PIRSF028235 1 310 1.1E-212 T 17-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 FORC55_3229 0610f771bb387ca2edbfaa8fbbc6c9e6 310 SUPERFAMILY SSF64182 5 307 1.83E-12 T 17-10-2018 IPR038763 DHH phosphoesterase superfamily FORC55_0341 f8ca3c90c7c9cb58fe14338d3a79290a 209 Pfam PF02441 Flavoprotein 6 181 2.9E-24 T 17-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 FORC55_0341 f8ca3c90c7c9cb58fe14338d3a79290a 209 Gene3D G3DSA:3.40.50.1950 1 203 1.5E-76 T 17-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 FORC55_0341 f8ca3c90c7c9cb58fe14338d3a79290a 209 SUPERFAMILY SSF52507 5 201 2.75E-57 T 17-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 FORC55_0341 f8ca3c90c7c9cb58fe14338d3a79290a 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 200 3.2E-57 T 17-10-2018 IPR004507 Flavin prenyltransferase UbiX-like FORC55_0341 f8ca3c90c7c9cb58fe14338d3a79290a 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 35.209 T 17-10-2018 IPR004507 Flavin prenyltransferase UbiX-like FORC55_0172 b7ef2ad65a48b820fa2b9278894c5728 359 Pfam PF13407 Periplasmic binding protein domain 64 313 1.2E-29 T 17-10-2018 IPR025997 Periplasmic binding protein FORC55_0172 b7ef2ad65a48b820fa2b9278894c5728 359 SUPERFAMILY SSF53822 61 337 1.52E-42 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_0172 b7ef2ad65a48b820fa2b9278894c5728 359 Gene3D G3DSA:3.40.50.2300 166 336 1.0E-43 T 17-10-2018 FORC55_0172 b7ef2ad65a48b820fa2b9278894c5728 359 Gene3D G3DSA:3.40.50.2300 69 328 1.0E-43 T 17-10-2018 FORC55_1554 2a7920f1424a80ded1f6783c2bd25939 148 Pfam PF01641 SelR domain 28 144 9.7E-47 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 FORC55_1554 2a7920f1424a80ded1f6783c2bd25939 148 Gene3D G3DSA:2.170.150.20 5 147 4.6E-53 T 17-10-2018 FORC55_1554 2a7920f1424a80ded1f6783c2bd25939 148 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 144 1.4E-49 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 FORC55_1554 2a7920f1424a80ded1f6783c2bd25939 148 SUPERFAMILY SSF51316 23 144 1.83E-51 T 17-10-2018 IPR011057 Mss4-like superfamily FORC55_3429 7e53edc8aaf9ae35f9b7de30a896de8a 516 Gene3D G3DSA:1.10.579.10 329 449 3.8E-54 T 17-10-2018 FORC55_3429 7e53edc8aaf9ae35f9b7de30a896de8a 516 SUPERFAMILY SSF48173 230 501 4.45E-65 T 17-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 FORC55_3429 7e53edc8aaf9ae35f9b7de30a896de8a 516 Gene3D G3DSA:3.40.50.620 8 231 6.0E-97 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_3429 7e53edc8aaf9ae35f9b7de30a896de8a 516 Gene3D G3DSA:1.25.40.80 132 325 6.0E-97 T 17-10-2018 FORC55_3429 7e53edc8aaf9ae35f9b7de30a896de8a 516 Gene3D G3DSA:1.10.10.1710 450 515 2.2E-26 T 17-10-2018 FORC55_3429 7e53edc8aaf9ae35f9b7de30a896de8a 516 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 3.3E-65 T 17-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein FORC55_1357 d26ac51ebdf378e0297f1cd25978f192 546 Gene3D G3DSA:1.20.1560.10 130 442 1.9E-68 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1357 d26ac51ebdf378e0297f1cd25978f192 546 SUPERFAMILY SSF90123 131 442 2.35E-62 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1357 d26ac51ebdf378e0297f1cd25978f192 546 Pfam PF00664 ABC transporter transmembrane region 146 412 6.1E-45 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 FORC55_1357 d26ac51ebdf378e0297f1cd25978f192 546 Gene3D G3DSA:3.40.50.300 443 502 3.3E-9 T 17-10-2018 FORC55_1357 d26ac51ebdf378e0297f1cd25978f192 546 Gene3D G3DSA:3.90.70.10 9 129 7.0E-10 T 17-10-2018 FORC55_1357 d26ac51ebdf378e0297f1cd25978f192 546 SUPERFAMILY SSF52540 450 496 9.8E-9 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1357 d26ac51ebdf378e0297f1cd25978f192 546 Pfam PF03412 Peptidase C39 family 24 124 4.7E-6 T 17-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 FORC55_3601 db1772d24b7dbe46e250833e9017f275 663 Pfam PF08014 Domain of unknown function (DUF1704) 324 657 6.2E-110 T 17-10-2018 IPR012548 Protein of unknown function DUF1704 FORC55_3601 db1772d24b7dbe46e250833e9017f275 663 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 297 656 9.3E-147 T 17-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA FORC55_3601 db1772d24b7dbe46e250833e9017f275 663 SMART SM01154 323 662 1.3E-157 T 17-10-2018 IPR012548 Protein of unknown function DUF1704 FORC55_3601 db1772d24b7dbe46e250833e9017f275 663 Pfam PF05013 N-formylglutamate amidohydrolase 42 225 4.5E-13 T 17-10-2018 IPR007709 N-formylglutamate amidohydrolase FORC55_3601 db1772d24b7dbe46e250833e9017f275 663 SUPERFAMILY SSF53187 35 225 3.77E-8 T 17-10-2018 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 2.1E-85 T 17-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 122 337 4.0E-125 T 17-10-2018 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 SMART SM00764 147 333 8.8E-136 T 17-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 Gene3D G3DSA:3.40.630.30 10 137 7.3E-11 T 17-10-2018 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 Pfam PF13673 Acetyltransferase (GNAT) domain 30 115 1.3E-6 T 17-10-2018 IPR000182 GNAT domain FORC55_1951 1e997c944dab6c84981643aa6d102734 351 PIRSF PIRSF005751 1 350 4.3E-145 T 17-10-2018 IPR005216 Citrate lyase ligase GO:0008771 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 SUPERFAMILY SSF52374 145 336 4.44E-25 T 17-10-2018 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 337 5.3E-137 T 17-10-2018 IPR005216 Citrate lyase ligase GO:0008771 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 202 8.2E-12 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 FORC55_1951 1e997c944dab6c84981643aa6d102734 351 SUPERFAMILY SSF55729 32 117 4.79E-13 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2347 c293abf8350eb68bb25cf7d44860531a 269 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 50.333 T 17-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 FORC55_2347 c293abf8350eb68bb25cf7d44860531a 269 PIRSF PIRSF000903 1 269 2.9E-122 T 17-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 FORC55_2347 c293abf8350eb68bb25cf7d44860531a 269 Pfam PF00149 Calcineurin-like phosphoesterase 5 156 5.3E-13 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_2347 c293abf8350eb68bb25cf7d44860531a 269 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 266 6.0E-115 T 17-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 FORC55_2347 c293abf8350eb68bb25cf7d44860531a 269 SUPERFAMILY SSF56300 4 252 1.04E-57 T 17-10-2018 FORC55_2347 c293abf8350eb68bb25cf7d44860531a 269 Gene3D G3DSA:3.60.21.10 2 267 1.1E-78 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_2384 6fb991ce1f72d4fa3c4d45dcd8f68425 575 SUPERFAMILY SSF160246 5 146 4.45E-38 T 17-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily FORC55_2384 6fb991ce1f72d4fa3c4d45dcd8f68425 575 Gene3D G3DSA:3.40.50.300 290 566 2.0E-100 T 17-10-2018 FORC55_2384 6fb991ce1f72d4fa3c4d45dcd8f68425 575 Gene3D G3DSA:3.30.450.90 148 287 2.0E-43 T 17-10-2018 FORC55_2384 6fb991ce1f72d4fa3c4d45dcd8f68425 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 149 7.5E-22 T 17-10-2018 IPR007831 General secretory system II, protein E, N-terminal FORC55_2384 6fb991ce1f72d4fa3c4d45dcd8f68425 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_2384 6fb991ce1f72d4fa3c4d45dcd8f68425 575 SUPERFAMILY SSF52540 178 559 2.77E-95 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2384 6fb991ce1f72d4fa3c4d45dcd8f68425 575 Pfam PF00437 Type II/IV secretion system protein 192 454 6.6E-78 T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_2384 6fb991ce1f72d4fa3c4d45dcd8f68425 575 SMART SM00382 315 436 0.0014 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1467 cdf6da143622e954334a7cf1f872d3b2 212 Gene3D G3DSA:2.40.160.20 22 212 8.5E-10 T 17-10-2018 FORC55_1467 cdf6da143622e954334a7cf1f872d3b2 212 SUPERFAMILY SSF56925 59 211 8.89E-9 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel FORC55_1467 cdf6da143622e954334a7cf1f872d3b2 212 Pfam PF13505 Outer membrane protein beta-barrel domain 8 211 7.5E-9 T 17-10-2018 IPR027385 Outer membrane protein beta-barrel FORC55_1020 b87342dd70eff8192fa9942da8678c5d 209 Gene3D G3DSA:1.10.357.10 59 197 6.5E-25 T 17-10-2018 FORC55_1020 b87342dd70eff8192fa9942da8678c5d 209 SUPERFAMILY SSF46689 5 64 5.34E-16 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1020 b87342dd70eff8192fa9942da8678c5d 209 SUPERFAMILY SSF48498 75 166 3.0E-9 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily FORC55_1020 b87342dd70eff8192fa9942da8678c5d 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.1E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1020 b87342dd70eff8192fa9942da8678c5d 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.1E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1020 b87342dd70eff8192fa9942da8678c5d 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.0E-16 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1020 b87342dd70eff8192fa9942da8678c5d 209 Gene3D G3DSA:1.10.10.60 1 56 2.5E-20 T 17-10-2018 FORC55_1020 b87342dd70eff8192fa9942da8678c5d 209 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 141 195 1.4E-4 T 17-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type FORC55_0612 fdf4faabef998dc5242e0d296db0d521 143 Gene3D G3DSA:3.10.129.10 1 143 7.5E-60 T 17-10-2018 FORC55_0612 fdf4faabef998dc5242e0d296db0d521 143 SUPERFAMILY SSF54637 1 139 5.57E-49 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_0612 fdf4faabef998dc5242e0d296db0d521 143 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 139 9.4E-59 T 17-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_0612 fdf4faabef998dc5242e0d296db0d521 143 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 142 36.67 T 17-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_0612 fdf4faabef998dc5242e0d296db0d521 143 Pfam PF07977 FabA-like domain 10 134 2.7E-41 T 17-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_1523 af9c9918f1de5dc0e773272688c7b425 182 Gene3D G3DSA:3.30.1380.10 61 182 1.0E-12 T 17-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 FORC55_1523 af9c9918f1de5dc0e773272688c7b425 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.6E-4 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal FORC55_1523 af9c9918f1de5dc0e773272688c7b425 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 30 179 2.5E-73 T 17-10-2018 IPR010275 Protein of unknown function DUF882 FORC55_1523 af9c9918f1de5dc0e773272688c7b425 182 SUPERFAMILY SSF55166 52 179 1.88E-33 T 17-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 224.892 T 17-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 Pfam PF00583 Acetyltransferase (GNAT) family 334 411 2.2E-4 T 17-10-2018 IPR000182 GNAT domain FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 Pfam PF00696 Amino acid kinase family 25 268 5.3E-26 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 SUPERFAMILY SSF53633 4 294 5.31E-67 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 Gene3D G3DSA:3.40.1160.10 7 296 1.6E-85 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 PIRSF PIRSF000423 1 445 1.4E-205 T 17-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 SUPERFAMILY SSF55729 300 424 2.74E-18 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 445 2.0E-229 T 17-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 FORC55_0550 3b699c0eccbdd261b2c46255c4cdf588 445 Gene3D G3DSA:3.40.630.30 297 445 6.3E-38 T 17-10-2018 FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 Gene3D G3DSA:1.20.1530.20 1 327 2.3E-68 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 Pfam PF00999 Sodium/hydrogen exchanger family 2 314 1.4E-53 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 PRINTS PR00335 TrkA potassium uptake protein signature 343 357 2.8E-7 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 PRINTS PR00335 TrkA potassium uptake protein signature 389 399 2.8E-7 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 PRINTS PR00335 TrkA potassium uptake protein signature 400 410 2.8E-7 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 PRINTS PR00335 TrkA potassium uptake protein signature 360 374 2.8E-7 T 17-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 Pfam PF02254 TrkA-N domain 344 454 1.1E-24 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 Gene3D G3DSA:3.40.50.720 340 502 5.5E-39 T 17-10-2018 FORC55_0278 af30bfbc5c8bb6ce34581d22219000bd 542 SUPERFAMILY SSF51735 343 471 5.65E-33 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0118 487901cd7106bfb879b59e3590bfd727 209 Pfam PF07947 YhhN family 28 206 6.2E-33 T 17-10-2018 IPR012506 YhhN-like GO:0016021 FORC55_1757 ee5333ec71e30a96ea3d7d6f6db056db 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 287 1.7E-75 T 17-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 FORC55_1757 ee5333ec71e30a96ea3d7d6f6db056db 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 31.176 T 17-10-2018 IPR010119 Gluconeogenesis factor FORC55_1757 ee5333ec71e30a96ea3d7d6f6db056db 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 292 2.5E-107 T 17-10-2018 IPR010119 Gluconeogenesis factor FORC55_1757 ee5333ec71e30a96ea3d7d6f6db056db 296 SUPERFAMILY SSF142338 6 291 1.96E-85 T 17-10-2018 FORC55_1757 ee5333ec71e30a96ea3d7d6f6db056db 296 Gene3D G3DSA:3.40.50.12300 4 296 5.0E-79 T 17-10-2018 IPR038136 Gluconeogenesis factor superfamily FORC55_2542 31cf9c983c37186d7071164f04d831c1 314 SUPERFAMILY SSF51735 1 308 1.86E-58 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2542 31cf9c983c37186d7071164f04d831c1 314 Gene3D G3DSA:3.40.50.720 3 307 6.1E-114 T 17-10-2018 FORC55_2542 31cf9c983c37186d7071164f04d831c1 314 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 313 1.6E-125 T 17-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 FORC55_2542 31cf9c983c37186d7071164f04d831c1 314 Gene3D G3DSA:3.90.25.10 173 295 6.1E-114 T 17-10-2018 FORC55_2542 31cf9c983c37186d7071164f04d831c1 314 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 314 47.4 T 17-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 FORC55_2542 31cf9c983c37186d7071164f04d831c1 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 5.0E-46 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 SUPERFAMILY SSF52540 189 500 5.61E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 SUPERFAMILY SSF54211 2 169 9.1E-32 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.0E-5 T 17-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.0E-5 T 17-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.0E-5 T 17-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 Gene3D G3DSA:3.30.230.10 1 166 2.3E-6 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 Gene3D G3DSA:3.40.50.300 176 499 4.0E-54 T 17-10-2018 FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 3.1E-215 T 17-10-2018 IPR004482 Mg chelatase-related protein FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 5.6E-91 T 17-10-2018 IPR000523 Magnesium chelatase ChlI domain FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.5E-47 T 17-10-2018 FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.9E-30 T 17-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain FORC55_0020 dad0e75ba851e0848f3652e2c45e2576 507 SMART SM00382 210 390 2.0E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2791 4763dfd12c8b2d99ae416e851bc08264 257 Pfam PF09850 Type VI secretion system protein DotU 39 240 1.0E-62 T 17-10-2018 IPR017732 Type IV / VI secretion system, DotU FORC55_2791 4763dfd12c8b2d99ae416e851bc08264 257 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 37 246 1.4E-70 T 17-10-2018 IPR017732 Type IV / VI secretion system, DotU FORC55_2791 4763dfd12c8b2d99ae416e851bc08264 257 Gene3D G3DSA:1.25.40.590 34 193 4.8E-62 T 17-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily FORC55_2625 1d406ba8612e78adf1f10da63ba890a2 518 Gene3D G3DSA:3.90.76.10 57 165 1.6E-122 T 17-10-2018 FORC55_2625 1d406ba8612e78adf1f10da63ba890a2 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 17-10-2018 IPR023765 Solute-binding protein family 5, conserved site FORC55_2625 1d406ba8612e78adf1f10da63ba890a2 518 SUPERFAMILY SSF53850 26 516 3.34E-126 T 17-10-2018 FORC55_2625 1d406ba8612e78adf1f10da63ba890a2 518 Gene3D G3DSA:3.10.105.10 279 494 1.6E-122 T 17-10-2018 FORC55_2625 1d406ba8612e78adf1f10da63ba890a2 518 PIRSF PIRSF002741 21 501 2.1E-95 T 17-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 FORC55_2625 1d406ba8612e78adf1f10da63ba890a2 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 426 3.7E-90 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_2625 1d406ba8612e78adf1f10da63ba890a2 518 Gene3D G3DSA:3.40.190.10 32 278 1.6E-122 T 17-10-2018 FORC55_3525 9367b57f2c4b6a2880959445b909aa7d 299 SUPERFAMILY SSF103481 41 136 1.7E-10 T 17-10-2018 FORC55_3525 9367b57f2c4b6a2880959445b909aa7d 299 SUPERFAMILY SSF103481 188 283 1.7E-12 T 17-10-2018 FORC55_3525 9367b57f2c4b6a2880959445b909aa7d 299 Pfam PF00892 EamA-like transporter family 151 280 1.3E-16 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3525 9367b57f2c4b6a2880959445b909aa7d 299 Pfam PF00892 EamA-like transporter family 3 135 2.4E-19 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_0096 bd6d768c2e3e9965fbe79da6b7b40e22 398 Pfam PF07219 HemY protein N-terminus 26 132 4.1E-27 T 17-10-2018 IPR010817 HemY, N-terminal FORC55_0096 bd6d768c2e3e9965fbe79da6b7b40e22 398 SUPERFAMILY SSF48452 314 389 2.31E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0096 bd6d768c2e3e9965fbe79da6b7b40e22 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 2.0E-132 T 17-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 FORC55_0096 bd6d768c2e3e9965fbe79da6b7b40e22 398 Gene3D G3DSA:1.25.40.10 307 397 3.7E-11 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0096 bd6d768c2e3e9965fbe79da6b7b40e22 398 SUPERFAMILY SSF48452 85 207 1.85E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0096 bd6d768c2e3e9965fbe79da6b7b40e22 398 Gene3D G3DSA:1.25.40.10 74 253 1.8E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 17-10-2018 IPR036838 Ribosomal protein S10 domain superfamily FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.5E-35 T 17-10-2018 IPR027486 Ribosomal protein S10 domain FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 17-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 17-10-2018 IPR027486 Ribosomal protein S10 domain FORC55_0287 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-37 T 17-10-2018 IPR036838 Ribosomal protein S10 domain superfamily FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 SUPERFAMILY SSF53383 457 947 1.62E-97 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 2.4E-175 T 17-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 Pfam PF02347 Glycine cleavage system P-protein 458 736 1.4E-8 T 17-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 Gene3D G3DSA:3.40.640.10 95 353 7.6E-104 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 Gene3D G3DSA:3.40.640.10 522 747 3.0E-57 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 17-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.435 T 17-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 SUPERFAMILY SSF53383 17 438 6.22E-100 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2984 b1641be4793991b2df5f874083b9d0cd 954 Gene3D G3DSA:3.90.1150.10 760 896 5.2E-41 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_2947 f21fa5eb9936cd4fde6320f2be64b258 413 Gene3D G3DSA:1.10.3210.10 193 381 1.2E-18 T 17-10-2018 FORC55_2947 f21fa5eb9936cd4fde6320f2be64b258 413 SUPERFAMILY SSF109604 185 403 8.16E-35 T 17-10-2018 FORC55_2947 f21fa5eb9936cd4fde6320f2be64b258 413 Gene3D G3DSA:3.20.20.450 52 192 3.2E-7 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2947 f21fa5eb9936cd4fde6320f2be64b258 413 SUPERFAMILY SSF141868 6 194 8.5E-15 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2947 f21fa5eb9936cd4fde6320f2be64b258 413 Pfam PF08668 HDOD domain 210 321 5.1E-12 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD FORC55_2947 f21fa5eb9936cd4fde6320f2be64b258 413 Pfam PF00563 EAL domain 74 193 8.1E-5 T 17-10-2018 IPR001633 EAL domain FORC55_2947 f21fa5eb9936cd4fde6320f2be64b258 413 PIRSF PIRSF003180 1 408 9.7E-129 T 17-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 Pfam PF13481 AAA domain 81 222 2.8E-13 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 SUPERFAMILY SSF54211 255 453 3.79E-42 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 Pfam PF13541 Subunit ChlI of Mg-chelatase 345 430 3.3E-9 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 SMART SM00382 91 244 1.7E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 Hamap MF_01498 DNA repair protein RadA [radA]. 20 455 42.707 T 17-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 Gene3D G3DSA:3.40.50.300 66 278 3.3E-39 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 PRINTS PR01874 DNA repair protein radA signature 213 241 1.2E-93 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 PRINTS PR01874 DNA repair protein radA signature 9 33 1.2E-93 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 PRINTS PR01874 DNA repair protein radA signature 124 141 1.2E-93 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 PRINTS PR01874 DNA repair protein radA signature 248 274 1.2E-93 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 PRINTS PR01874 DNA repair protein radA signature 322 345 1.2E-93 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 PRINTS PR01874 DNA repair protein radA signature 174 198 1.2E-93 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 PRINTS PR01874 DNA repair protein radA signature 83 111 1.2E-93 T 17-10-2018 FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 SUPERFAMILY SSF52540 68 289 1.12E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 Gene3D G3DSA:3.30.230.10 316 456 5.9E-21 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0528 2a87d31248b3ba90444f67b6d39e3750 457 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 451 3.1E-223 T 17-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 Gene3D G3DSA:3.40.190.10 337 435 3.7E-27 T 17-10-2018 FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 Gene3D G3DSA:3.40.190.10 116 181 1.6E-7 T 17-10-2018 FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 SMART SM00267 502 663 1.1E-24 T 17-10-2018 IPR000160 GGDEF domain FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 Gene3D G3DSA:3.40.190.10 25 110 4.0E-10 T 17-10-2018 FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 SUPERFAMILY SSF55073 518 656 6.98E-30 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 512 657 1.8E-28 T 17-10-2018 IPR000160 GGDEF domain FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 227 6.4E-17 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 SUPERFAMILY SSF53850 251 465 1.92E-26 T 17-10-2018 FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 Gene3D G3DSA:3.30.70.270 508 669 1.3E-34 T 17-10-2018 FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 SUPERFAMILY SSF53850 45 227 2.17E-24 T 17-10-2018 FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 Pfam PF00990 Diguanylate cyclase, GGDEF domain 513 656 9.4E-30 T 17-10-2018 IPR000160 GGDEF domain FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 SMART SM00062 30 231 1.7E-11 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 SMART SM00062 250 497 1.2E-4 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 Gene3D G3DSA:3.40.190.10 248 467 3.7E-27 T 17-10-2018 FORC55_1714 b9c094a006e0acb284b77b383f64407c 673 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 255 445 6.5E-24 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_0227 b671b348e6dc86df96b3f8d68e17e1a3 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 5 328 3.9E-127 T 17-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase FORC55_0227 b671b348e6dc86df96b3f8d68e17e1a3 340 Pfam PF04055 Radical SAM superfamily 118 280 2.2E-11 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_0227 b671b348e6dc86df96b3f8d68e17e1a3 340 PIRSF PIRSF004911 5 340 9.4E-114 T 17-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase FORC55_0227 b671b348e6dc86df96b3f8d68e17e1a3 340 SUPERFAMILY SSF102114 102 324 2.62E-25 T 17-10-2018 FORC55_0227 b671b348e6dc86df96b3f8d68e17e1a3 340 Gene3D G3DSA:3.20.20.70 51 334 7.1E-91 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0227 b671b348e6dc86df96b3f8d68e17e1a3 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.2E-156 T 17-10-2018 IPR022462 Lysine-2,3-aminomutase-like FORC55_0227 b671b348e6dc86df96b3f8d68e17e1a3 340 Pfam PF13353 4Fe-4S single cluster domain 110 183 2.3E-7 T 17-10-2018 FORC55_2478 8c79486c993b41cb1c39ca26c0569499 396 Gene3D G3DSA:1.20.1250.20 5 190 1.0E-16 T 17-10-2018 FORC55_2478 8c79486c993b41cb1c39ca26c0569499 396 SUPERFAMILY SSF103473 9 373 1.7E-36 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_2478 8c79486c993b41cb1c39ca26c0569499 396 Pfam PF12832 MFS_1 like family 13 361 1.2E-42 T 17-10-2018 IPR024989 Major facilitator superfamily associated domain FORC55_2478 8c79486c993b41cb1c39ca26c0569499 396 Gene3D G3DSA:1.20.1250.20 196 381 1.4E-31 T 17-10-2018 FORC55_2478 8c79486c993b41cb1c39ca26c0569499 396 PIRSF PIRSF004925 3 389 3.2E-101 T 17-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 323 337 - T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 SMART SM00382 256 379 3.6E-5 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 SUPERFAMILY SSF52540 110 500 2.96E-108 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 Gene3D G3DSA:3.30.300.160 1 93 4.7E-50 T 17-10-2018 FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 500 3.9E-237 T 17-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 Gene3D G3DSA:3.30.450.90 94 228 5.1E-56 T 17-10-2018 FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 Pfam PF00437 Type II/IV secretion system protein 130 395 8.0E-91 T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 SUPERFAMILY SSF160246 15 81 7.32E-16 T 17-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily FORC55_0153 b292befdd346ea7af468f11696d24bc3 503 Gene3D G3DSA:3.40.50.300 229 503 1.8E-131 T 17-10-2018 FORC55_2070 83bc89272095924124e133e731861ef3 446 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 441 5.6E-5 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2070 83bc89272095924124e133e731861ef3 446 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 404 421 5.6E-5 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2070 83bc89272095924124e133e731861ef3 446 SUPERFAMILY SSF52172 26 190 6.76E-7 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2070 83bc89272095924124e133e731861ef3 446 Pfam PF00158 Sigma-54 interaction domain 146 307 2.5E-41 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_2070 83bc89272095924124e133e731861ef3 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_2070 83bc89272095924124e133e731861ef3 446 SMART SM00382 166 305 3.3E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2070 83bc89272095924124e133e731861ef3 446 Pfam PF02954 Bacterial regulatory protein, Fis family 398 437 8.9E-8 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_2070 83bc89272095924124e133e731861ef3 446 Gene3D G3DSA:1.10.10.60 389 442 1.5E-12 T 17-10-2018 FORC55_2070 83bc89272095924124e133e731861ef3 446 Gene3D G3DSA:1.10.8.60 314 384 3.6E-23 T 17-10-2018 FORC55_2070 83bc89272095924124e133e731861ef3 446 Gene3D G3DSA:3.40.50.300 140 312 7.2E-44 T 17-10-2018 FORC55_2070 83bc89272095924124e133e731861ef3 446 SUPERFAMILY SSF52540 146 377 4.56E-52 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2070 83bc89272095924124e133e731861ef3 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_2070 83bc89272095924124e133e731861ef3 446 SUPERFAMILY SSF46689 352 440 1.89E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1007 345cef351ae4d4a6795791aa89c188a6 506 SUPERFAMILY SSF53720 13 497 4.84E-163 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_1007 345cef351ae4d4a6795791aa89c188a6 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 FORC55_1007 345cef351ae4d4a6795791aa89c188a6 506 Gene3D G3DSA:3.40.605.10 11 269 5.4E-91 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_1007 345cef351ae4d4a6795791aa89c188a6 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 5.2E-166 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 FORC55_1007 345cef351ae4d4a6795791aa89c188a6 506 Gene3D G3DSA:3.40.309.10 270 501 3.3E-73 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 FORC55_1007 345cef351ae4d4a6795791aa89c188a6 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 FORC55_1513 c449266496112b61f753a0dfa940dee7 534 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 17-10-2018 IPR018093 BCCT transporter, conserved site FORC55_1513 c449266496112b61f753a0dfa940dee7 534 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 3.8E-176 T 17-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 FORC55_1513 c449266496112b61f753a0dfa940dee7 534 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 521 1.2E-138 T 17-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 FORC55_2354 1caef9a170ebaf10cc695a11c724e6ae 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 17-10-2018 IPR033749 Polyprenyl synthetase, conserved site FORC55_2354 1caef9a170ebaf10cc695a11c724e6ae 323 Gene3D G3DSA:1.10.600.10 1 323 8.1E-121 T 17-10-2018 IPR008949 Isoprenoid synthase domain superfamily FORC55_2354 1caef9a170ebaf10cc695a11c724e6ae 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 17-10-2018 IPR033749 Polyprenyl synthetase, conserved site FORC55_2354 1caef9a170ebaf10cc695a11c724e6ae 323 Pfam PF00348 Polyprenyl synthetase 32 273 1.2E-75 T 17-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 FORC55_2354 1caef9a170ebaf10cc695a11c724e6ae 323 SUPERFAMILY SSF48576 4 322 2.24E-101 T 17-10-2018 IPR008949 Isoprenoid synthase domain superfamily FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 Gene3D G3DSA:3.40.50.300 461 703 4.3E-75 T 17-10-2018 FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 Pfam PF00664 ABC transporter transmembrane region 158 417 9.0E-24 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 SUPERFAMILY SSF90123 137 452 1.44E-51 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 2.1E-292 T 17-10-2018 IPR017750 ATPase, type I secretion system FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 Pfam PF00005 ABC transporter 487 635 3.9E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 Gene3D G3DSA:1.20.1560.10 142 454 1.8E-58 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 SUPERFAMILY SSF52540 459 693 3.63E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 Gene3D G3DSA:3.90.70.10 1 126 1.8E-34 T 17-10-2018 FORC55_3659 33356f3794c365e66928a7da61e7ad69 704 SMART SM00382 495 681 1.6E-16 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.456 T 17-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 Gene3D G3DSA:3.40.50.720 155 288 2.0E-117 T 17-10-2018 FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 1.6E-27 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 Gene3D G3DSA:3.90.180.10 22 330 2.0E-117 T 17-10-2018 FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 SUPERFAMILY SSF51735 143 307 3.13E-37 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 1.2E-30 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 7.7E-180 T 17-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 SUPERFAMILY SSF50129 3 175 1.67E-52 T 17-10-2018 IPR011032 GroES-like superfamily FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 17-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 FORC55_3478 0a9d27c941dd30dfcbddb492640ad785 343 SMART SM00829 14 340 2.9E-5 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 FORC55_0633 948cc64028c21a87145368f593543258 346 Gene3D G3DSA:3.30.1330.10 7 171 2.9E-70 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily FORC55_0633 948cc64028c21a87145368f593543258 346 SUPERFAMILY SSF55326 8 171 2.84E-54 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily FORC55_0633 948cc64028c21a87145368f593543258 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 1.1E-149 T 17-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_0633 948cc64028c21a87145368f593543258 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.397 T 17-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_0633 948cc64028c21a87145368f593543258 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 343 5.8E-40 T 17-10-2018 IPR010918 PurM-like, C-terminal domain FORC55_0633 948cc64028c21a87145368f593543258 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 165 5.2E-16 T 17-10-2018 IPR016188 PurM-like, N-terminal domain FORC55_0633 948cc64028c21a87145368f593543258 346 SUPERFAMILY SSF56042 172 342 9.57E-62 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily FORC55_0633 948cc64028c21a87145368f593543258 346 Gene3D G3DSA:3.90.650.10 172 346 1.1E-74 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily FORC55_0426 fb39b9bf1f18914a3ebdce076848c6b8 271 Gene3D G3DSA:1.10.287.1080 132 265 2.8E-46 T 17-10-2018 FORC55_0426 fb39b9bf1f18914a3ebdce076848c6b8 271 SUPERFAMILY SSF101386 3 104 4.51E-24 T 17-10-2018 FORC55_0426 fb39b9bf1f18914a3ebdce076848c6b8 271 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 9.0E-27 T 17-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core FORC55_0426 fb39b9bf1f18914a3ebdce076848c6b8 271 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 170 229 3.1E-7 T 17-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core FORC55_0426 fb39b9bf1f18914a3ebdce076848c6b8 271 SUPERFAMILY SSF101386 138 240 7.56E-25 T 17-10-2018 FORC55_0426 fb39b9bf1f18914a3ebdce076848c6b8 271 Gene3D G3DSA:1.10.287.1080 2 126 1.9E-45 T 17-10-2018 FORC55_0426 fb39b9bf1f18914a3ebdce076848c6b8 271 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 3.8E-104 T 17-10-2018 IPR011551 NTP pyrophosphohydrolase MazG FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 Gene3D G3DSA:2.60.40.1250 34 168 8.3E-40 T 17-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 Pfam PF11412 Disulphide bond corrector protein DsbC 40 152 6.2E-30 T 17-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 Pfam PF13899 Thioredoxin-like 488 552 5.7E-14 T 17-10-2018 FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 Gene3D G3DSA:3.40.30.10 472 598 3.3E-34 T 17-10-2018 FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 SUPERFAMILY SSF52833 485 596 2.34E-22 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 207 407 4.1E-17 T 17-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 ProSitePatterns PS00194 Thioredoxin family active site. 507 525 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 SUPERFAMILY SSF74863 39 152 6.54E-40 T 17-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily FORC55_0189 a00ed7d1fd4329a5f8ec309a888ac1ab 600 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 599 39.662 T 17-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 531 1.4E-283 T 17-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 524 3.9E-14 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 Gene3D G3DSA:2.30.38.10 358 433 3.2E-23 T 17-10-2018 FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 Gene3D G3DSA:3.30.300.310 435 538 2.7E-31 T 17-10-2018 FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 Gene3D G3DSA:3.40.50.980 22 174 3.3E-39 T 17-10-2018 FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 Gene3D G3DSA:3.40.50.980 185 357 3.2E-56 T 17-10-2018 FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 Pfam PF00501 AMP-binding enzyme 31 439 2.5E-76 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_1971 a0ac93ec334f22bfcf22b82b3ef01532 543 SUPERFAMILY SSF56801 6 534 6.8E-133 T 17-10-2018 FORC55_0807 4ea3e79fa5c729f39544f485d18e764e 401 Gene3D G3DSA:1.20.120.160 280 391 4.9E-18 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_0807 4ea3e79fa5c729f39544f485d18e764e 401 SUPERFAMILY SSF47226 284 380 2.09E-17 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_0807 4ea3e79fa5c729f39544f485d18e764e 401 SMART SM00073 292 387 3.0E-5 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_0807 4ea3e79fa5c729f39544f485d18e764e 401 Pfam PF01627 Hpt domain 301 376 3.6E-10 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_1466 d8149a23dfc5d7c7a89d9cd96101e71d 265 Gene3D G3DSA:2.30.260.10 174 265 1.6E-20 T 17-10-2018 FORC55_1466 d8149a23dfc5d7c7a89d9cd96101e71d 265 SUPERFAMILY SSF54001 37 264 2.84E-73 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily FORC55_1466 d8149a23dfc5d7c7a89d9cd96101e71d 265 Pfam PF07313 Protein of unknown function (DUF1460) 60 257 4.2E-75 T 17-10-2018 IPR010846 Protein of unknown function DUF1460 FORC55_1466 d8149a23dfc5d7c7a89d9cd96101e71d 265 Gene3D G3DSA:1.10.3670.10 50 173 2.0E-22 T 17-10-2018 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 SUPERFAMILY SSF56542 7 407 6.54E-78 T 17-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 342 363 5.8E-37 T 17-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 79 100 5.8E-37 T 17-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 199 217 5.8E-37 T 17-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 240 265 5.8E-37 T 17-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 110 130 5.8E-37 T 17-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 290 316 5.8E-37 T 17-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 354 361 - T 17-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 SUPERFAMILY SSF55035 144 259 1.26E-36 T 17-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 57 417 6.9E-112 T 17-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 Gene3D G3DSA:3.90.770.10 90 403 5.4E-111 T 17-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_3358 acf88f9d00c6ec649a3186acb73ebcc5 417 Gene3D G3DSA:3.30.70.420 144 259 5.4E-111 T 17-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 FORC55_0306 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 17-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0306 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 17-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0306 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 17-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily FORC55_0306 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 17-10-2018 IPR018038 Ribosomal protein L30, conserved site FORC55_0306 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.2E-28 T 17-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0306 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 17-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily FORC55_0306 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 17-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain FORC55_1856 78c93fc5516c890647565e722a700bb4 116 Gene3D G3DSA:3.40.50.2300 1 108 4.1E-19 T 17-10-2018 FORC55_1856 78c93fc5516c890647565e722a700bb4 116 SUPERFAMILY SSF52788 2 100 3.14E-18 T 17-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily FORC55_1856 78c93fc5516c890647565e722a700bb4 116 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 2 98 1.6E-10 T 17-10-2018 IPR023485 Phosphotyrosine protein phosphatase I FORC55_1820 e6b9ff8af36b3fe188d1ce18d216d2ed 342 Gene3D G3DSA:3.40.50.300 1 139 1.7E-50 T 17-10-2018 FORC55_1820 e6b9ff8af36b3fe188d1ce18d216d2ed 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 9.5E-107 T 17-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 FORC55_1820 e6b9ff8af36b3fe188d1ce18d216d2ed 342 SUPERFAMILY SSF52540 1 208 1.59E-49 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1820 e6b9ff8af36b3fe188d1ce18d216d2ed 342 Gene3D G3DSA:1.20.272.10 213 338 3.0E-37 T 17-10-2018 FORC55_1820 e6b9ff8af36b3fe188d1ce18d216d2ed 342 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 333 1.0E-34 T 17-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_1820 e6b9ff8af36b3fe188d1ce18d216d2ed 342 SUPERFAMILY SSF48019 211 333 4.25E-29 T 17-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 FORC55_1820 e6b9ff8af36b3fe188d1ce18d216d2ed 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 7.0E-51 T 17-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 FORC55_1820 e6b9ff8af36b3fe188d1ce18d216d2ed 342 Gene3D G3DSA:1.10.8.60 143 212 2.5E-19 T 17-10-2018 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-38 T 17-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 17-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 Gene3D G3DSA:2.40.50.140 1 84 2.9E-39 T 17-10-2018 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 Pfam PF00366 Ribosomal protein S17 10 77 1.0E-34 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.251 T 17-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 SUPERFAMILY SSF50249 6 83 2.66E-34 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0297 3bfa8cb8c2974760d807f060a4011116 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 4.0E-39 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2492 e767c34eb3de45234dfbe72b833f0682 598 Pfam PF00920 Dehydratase family 67 594 5.8E-149 T 17-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_2492 e767c34eb3de45234dfbe72b833f0682 598 Gene3D G3DSA:3.50.30.80 418 564 6.0E-48 T 17-10-2018 FORC55_2492 e767c34eb3de45234dfbe72b833f0682 598 SUPERFAMILY SSF52016 418 596 1.33E-52 T 17-10-2018 FORC55_2492 e767c34eb3de45234dfbe72b833f0682 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 17-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_2492 e767c34eb3de45234dfbe72b833f0682 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 17-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_2492 e767c34eb3de45234dfbe72b833f0682 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 1.0E-248 T 17-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 FORC55_2492 e767c34eb3de45234dfbe72b833f0682 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.849 T 17-10-2018 FORC55_2492 e767c34eb3de45234dfbe72b833f0682 598 SUPERFAMILY SSF143975 2 416 7.32E-131 T 17-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 FORC55_0127 590e40e249430512ed0b93643ed437bc 123 Pfam PF07226 Protein of unknown function (DUF1422) 9 119 9.0E-49 T 17-10-2018 IPR009867 Protein of unknown function DUF1422 FORC55_0127 590e40e249430512ed0b93643ed437bc 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 7 116 2.0E-57 T 17-10-2018 IPR009867 Protein of unknown function DUF1422 FORC55_1214 b1f1ea987ccc4383095ee2f8372ed96d 435 Gene3D G3DSA:1.20.1600.10 22 427 7.9E-83 T 17-10-2018 FORC55_1214 b1f1ea987ccc4383095ee2f8372ed96d 435 Pfam PF02321 Outer membrane efflux protein 24 211 1.1E-28 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_1214 b1f1ea987ccc4383095ee2f8372ed96d 435 Pfam PF02321 Outer membrane efflux protein 231 415 3.5E-29 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_1214 b1f1ea987ccc4383095ee2f8372ed96d 435 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 430 1.1E-139 T 17-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 FORC55_1214 b1f1ea987ccc4383095ee2f8372ed96d 435 SUPERFAMILY SSF56954 23 430 1.96E-88 T 17-10-2018 FORC55_2948 ab59ed7dc1793dc40ec5c954cc881c77 304 Pfam PF13592 Winged helix-turn helix 52 109 1.9E-19 T 17-10-2018 IPR025959 Winged helix-turn helix domain FORC55_2948 ab59ed7dc1793dc40ec5c954cc881c77 304 SUPERFAMILY SSF53098 174 263 3.19E-7 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2948 ab59ed7dc1793dc40ec5c954cc881c77 304 Pfam PF13358 DDE superfamily endonuclease 123 266 1.1E-34 T 17-10-2018 IPR038717 Tc1-like transposase, DDE domain FORC55_2948 ab59ed7dc1793dc40ec5c954cc881c77 304 Gene3D G3DSA:3.30.420.470 94 297 2.4E-11 T 17-10-2018 FORC55_2948 ab59ed7dc1793dc40ec5c954cc881c77 304 SUPERFAMILY SSF46689 1 85 2.87E-14 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3352 05b747bf2469218fccbea847d4e77c7f 699 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 13 178 1.0E-49 T 17-10-2018 IPR022161 DNA helicase IV, N-terminal domain FORC55_3352 05b747bf2469218fccbea847d4e77c7f 699 Pfam PF00580 UvrD/REP helicase N-terminal domain 212 508 3.7E-43 T 17-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 FORC55_3352 05b747bf2469218fccbea847d4e77c7f 699 Gene3D G3DSA:3.40.50.300 517 692 1.2E-28 T 17-10-2018 FORC55_3352 05b747bf2469218fccbea847d4e77c7f 699 Pfam PF13361 UvrD-like helicase C-terminal domain 607 678 6.9E-17 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 FORC55_3352 05b747bf2469218fccbea847d4e77c7f 699 Gene3D G3DSA:3.40.50.300 212 509 4.2E-52 T 17-10-2018 FORC55_3352 05b747bf2469218fccbea847d4e77c7f 699 Gene3D G3DSA:1.10.10.160 313 428 4.2E-52 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily FORC55_3352 05b747bf2469218fccbea847d4e77c7f 699 SUPERFAMILY SSF52540 210 691 3.4E-87 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0959 9dbfd257c5cccf2a17c4483fdc96acb8 257 Pfam PF02348 Cytidylyltransferase 5 221 3.4E-65 T 17-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 FORC55_0959 9dbfd257c5cccf2a17c4483fdc96acb8 257 SUPERFAMILY SSF53448 3 246 1.46E-65 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_0959 9dbfd257c5cccf2a17c4483fdc96acb8 257 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.854 T 17-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 FORC55_0959 9dbfd257c5cccf2a17c4483fdc96acb8 257 Gene3D G3DSA:3.90.550.10 1 252 5.9E-99 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_0959 9dbfd257c5cccf2a17c4483fdc96acb8 257 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.0E-116 T 17-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 FORC55_1276 284cd8b4d999dfcd217621667a24bccf 280 SUPERFAMILY SSF161098 7 277 1.01E-52 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1276 284cd8b4d999dfcd217621667a24bccf 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 275 2.1E-13 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1276 284cd8b4d999dfcd217621667a24bccf 280 Gene3D G3DSA:1.10.3720.10 3 273 3.8E-49 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.655 T 17-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 2.5E-8 T 17-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 17-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 9.4E-19 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 SUPERFAMILY SSF48150 4 207 3.3E-71 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 PIRSF PIRSF001435 1 210 8.3E-50 T 17-10-2018 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 SMART SM00525 186 206 1.8E-5 T 17-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 Gene3D G3DSA:1.10.1670.10 11 203 1.3E-78 T 17-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 Gene3D G3DSA:1.10.340.30 21 132 1.3E-78 T 17-10-2018 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 3.1E-89 T 17-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 SMART SM00478 38 185 2.0E-53 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 17-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 FORC55_1767 87014d7bdc36171f640b02b7c711d26e 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 17-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 FORC55_2717 5a4213dcd36282d94f96ef303c179d7e 278 Pfam PF00491 Arginase family 71 248 1.3E-6 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 FORC55_2717 5a4213dcd36282d94f96ef303c179d7e 278 SUPERFAMILY SSF52768 44 269 2.7E-24 T 17-10-2018 IPR023696 Ureohydrolase domain superfamily FORC55_2717 5a4213dcd36282d94f96ef303c179d7e 278 Gene3D G3DSA:3.40.800.10 39 267 1.9E-9 T 17-10-2018 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 30 3.4E-4 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 Gene3D G3DSA:2.40.40.20 649 813 9.2E-48 T 17-10-2018 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 17-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 SUPERFAMILY SSF50692 669 816 4.52E-43 T 17-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 7.1E-79 T 17-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 Gene3D G3DSA:3.90.55.10 81 615 2.1E-240 T 17-10-2018 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 SUPERFAMILY SSF53706 42 660 3.8E-167 T 17-10-2018 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 17-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 9.3E-24 T 17-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 820 0.0 T 17-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 Gene3D G3DSA:3.40.50.740 87 569 2.1E-240 T 17-10-2018 FORC55_1147 fd2f2ee05917d41999b62d26234c8863 820 Gene3D G3DSA:3.40.228.10 179 641 2.1E-240 T 17-10-2018 FORC55_1847 c7fb4fee6abdfd810e54619724657748 358 Gene3D G3DSA:3.40.50.2000 47 348 3.0E-58 T 17-10-2018 FORC55_1847 c7fb4fee6abdfd810e54619724657748 358 Pfam PF00534 Glycosyl transferases group 1 181 333 2.2E-36 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 FORC55_1847 c7fb4fee6abdfd810e54619724657748 358 Gene3D G3DSA:3.40.50.2000 167 339 3.0E-58 T 17-10-2018 FORC55_1847 c7fb4fee6abdfd810e54619724657748 358 SUPERFAMILY SSF53756 48 357 1.1E-65 T 17-10-2018 FORC55_3328 5be57985a8b43424d036467f068f095c 591 SUPERFAMILY SSF53474 226 527 1.2E-34 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_3328 5be57985a8b43424d036467f068f095c 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 2.3E-262 T 17-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 FORC55_3328 5be57985a8b43424d036467f068f095c 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 2.6E-73 T 17-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 FORC55_3328 5be57985a8b43424d036467f068f095c 591 Gene3D G3DSA:3.40.50.1820 226 409 1.3E-7 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_1388 f6f91a6857ef6e90ef08ce7a4c80bc8c 244 Pfam PF11153 Protein of unknown function (DUF2931) 4 229 5.7E-51 T 17-10-2018 IPR021326 Protein of unknown function DUF2931 FORC55_1460 3e6ead27a3bef770558adea7193c3dfc 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 17-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 FORC55_1460 3e6ead27a3bef770558adea7193c3dfc 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 259 5.4E-47 T 17-10-2018 FORC55_1460 3e6ead27a3bef770558adea7193c3dfc 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 4.9E-129 T 17-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 FORC55_1460 3e6ead27a3bef770558adea7193c3dfc 298 SUPERFAMILY SSF51621 5 294 4.35E-98 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_1460 3e6ead27a3bef770558adea7193c3dfc 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 50.628 T 17-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 FORC55_1460 3e6ead27a3bef770558adea7193c3dfc 298 Gene3D G3DSA:3.20.20.60 2 298 3.6E-100 T 17-10-2018 FORC55_1976 2db5fb166155f9320af73189feb36879 487 Gene3D G3DSA:3.20.20.70 1 486 5.1E-209 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1976 2db5fb166155f9320af73189feb36879 487 SMART SM00116 96 144 9.8E-10 T 17-10-2018 IPR000644 CBS domain FORC55_1976 2db5fb166155f9320af73189feb36879 487 SMART SM00116 158 206 3.9E-6 T 17-10-2018 IPR000644 CBS domain FORC55_1976 2db5fb166155f9320af73189feb36879 487 SUPERFAMILY SSF54631 95 203 1.04E-24 T 17-10-2018 FORC55_1976 2db5fb166155f9320af73189feb36879 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 82.75 T 17-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 FORC55_1976 2db5fb166155f9320af73189feb36879 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.5E-161 T 17-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 FORC55_1976 2db5fb166155f9320af73189feb36879 487 SMART SM01240 7 473 0.0 T 17-10-2018 FORC55_1976 2db5fb166155f9320af73189feb36879 487 SUPERFAMILY SSF51412 1 477 7.2E-123 T 17-10-2018 FORC55_1976 2db5fb166155f9320af73189feb36879 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.1E-194 T 17-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 FORC55_1976 2db5fb166155f9320af73189feb36879 487 Pfam PF00571 CBS domain 149 201 2.5E-4 T 17-10-2018 IPR000644 CBS domain FORC55_1976 2db5fb166155f9320af73189feb36879 487 Pfam PF00571 CBS domain 95 140 3.1E-9 T 17-10-2018 IPR000644 CBS domain FORC55_1976 2db5fb166155f9320af73189feb36879 487 PIRSF PIRSF000130 1 487 4.4E-199 T 17-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 FORC55_1976 2db5fb166155f9320af73189feb36879 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 17-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 SMART SM00729 43 255 2.3E-37 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 PIRSF PIRSF001619 1 318 3.7E-137 T 17-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 SUPERFAMILY SSF102114 5 310 1.7E-92 T 17-10-2018 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 2.6E-125 T 17-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 Pfam PF04055 Radical SAM superfamily 50 200 1.9E-15 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 4.4E-20 T 17-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.761 T 17-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 Gene3D G3DSA:3.20.20.70 4 315 4.7E-133 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1672 8bd699096fc37bf614f5fbe01b77183d 350 SMART SM00876 220 312 2.3E-46 T 17-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 SMART SM00283 376 637 4.6E-90 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 SUPERFAMILY SSF58104 329 638 1.7E-79 T 17-10-2018 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 Gene3D G3DSA:3.30.450.20 155 284 1.9E-15 T 17-10-2018 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 604 1.4E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 7.5E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 501 7.5E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 7.5E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 SMART SM00304 307 361 3.4E-10 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 Gene3D G3DSA:1.10.287.950 306 638 9.5E-76 T 17-10-2018 FORC55_2854 4e07f425a315f2b1ec1fcde3d091429b 638 Pfam PF00672 HAMP domain 312 357 3.2E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2165 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 144 4.3E-39 T 17-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 FORC55_2165 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 SUPERFAMILY SSF55729 1 146 1.89E-32 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2165 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 Gene3D G3DSA:3.40.630.30 5 148 9.7E-40 T 17-10-2018 FORC55_2165 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 Pfam PF00583 Acetyltransferase (GNAT) family 25 121 7.2E-15 T 17-10-2018 IPR000182 GNAT domain FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 Pfam PF01580 FtsK/SpoIIIE family 575 788 8.6E-71 T 17-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 Gene3D G3DSA:1.10.10.10 886 953 1.7E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 Gene3D G3DSA:3.30.980.40 467 571 6.4E-33 T 17-10-2018 FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 Gene3D G3DSA:3.40.50.300 572 874 2.1E-119 T 17-10-2018 FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 Pfam PF09397 Ftsk gamma domain 894 954 1.3E-25 T 17-10-2018 IPR018541 FtsK gamma domain FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 SMART SM00843 892 957 5.3E-39 T 17-10-2018 IPR018541 FtsK gamma domain FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 SUPERFAMILY SSF52540 549 861 1.81E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 SUPERFAMILY SSF46785 892 955 8.16E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0933 199d203589718df6e25ce4cec4e3da18 960 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 2.2E-42 T 17-10-2018 IPR025199 DNA translocase FtsK, 4TM region FORC55_1957 76e74a0c5aefd3acba3fbcbd70067b57 227 SUPERFAMILY SSF52172 5 144 3.13E-30 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1957 76e74a0c5aefd3acba3fbcbd70067b57 227 PIRSF PIRSF006171 3 227 5.8E-80 T 17-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 FORC55_1957 76e74a0c5aefd3acba3fbcbd70067b57 227 Pfam PF00072 Response regulator receiver domain 7 117 3.8E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1957 76e74a0c5aefd3acba3fbcbd70067b57 227 Pfam PF12431 Transcriptional regulator 134 162 9.0E-11 T 17-10-2018 IPR028141 Transcriptional regulator FORC55_1957 76e74a0c5aefd3acba3fbcbd70067b57 227 Gene3D G3DSA:3.40.50.2300 2 143 1.3E-25 T 17-10-2018 FORC55_1957 76e74a0c5aefd3acba3fbcbd70067b57 227 SMART SM00448 5 118 9.5E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 297 1.8E-149 T 17-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 Pfam PF03462 PCRF domain 1 153 1.7E-48 T 17-10-2018 IPR005139 Peptide chain release factor GO:0006415 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 SMART SM00937 19 129 4.8E-57 T 17-10-2018 IPR005139 Peptide chain release factor GO:0006415 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 179 195 - T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 SUPERFAMILY SSF75620 1 298 1.96E-125 T 17-10-2018 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 Gene3D G3DSA:3.30.70.1660 64 292 4.5E-96 T 17-10-2018 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 299 32.294 T 17-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 Gene3D G3DSA:3.30.160.20 160 255 4.5E-96 T 17-10-2018 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 Gene3D G3DSA:1.20.58.410 1 50 4.2E-11 T 17-10-2018 FORC55_2072 10fa683f53d364a1ec0d2fb92b47a115 299 Pfam PF00472 RF-1 domain 163 271 1.7E-40 T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 17-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 17-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 Pfam PF00344 SecY translocase 76 418 2.2E-117 T 17-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 4.9E-95 T 17-10-2018 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 3.0E-134 T 17-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 PIRSF PIRSF004557 11 442 6.4E-121 T 17-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.157 T 17-10-2018 IPR026593 Protein translocase subunit SecY FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 Gene3D G3DSA:1.10.3370.10 10 430 8.9E-160 T 17-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_0308 2128a2a97ef72257fa3e2b7225d0f9f6 444 SUPERFAMILY SSF103491 15 425 3.4E-130 T 17-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_1316 18739b42cb21cb0d19d7de832d9fa03d 160 SUPERFAMILY SSF89963 2 86 1.05E-29 T 17-10-2018 IPR036183 YajQ-like superfamily FORC55_1316 18739b42cb21cb0d19d7de832d9fa03d 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 5.3E-63 T 17-10-2018 IPR007551 Protein of unknown function DUF520 FORC55_1316 18739b42cb21cb0d19d7de832d9fa03d 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 28.689 T 17-10-2018 IPR007551 Protein of unknown function DUF520 FORC55_1316 18739b42cb21cb0d19d7de832d9fa03d 160 Gene3D G3DSA:3.30.70.990 9 94 2.2E-26 T 17-10-2018 IPR035570 UPF0234, N-terminal FORC55_1316 18739b42cb21cb0d19d7de832d9fa03d 160 Gene3D G3DSA:3.30.70.860 95 160 5.3E-30 T 17-10-2018 IPR035571 UPF0234-like, C-terminal FORC55_1316 18739b42cb21cb0d19d7de832d9fa03d 160 SUPERFAMILY SSF89963 88 159 1.36E-28 T 17-10-2018 IPR036183 YajQ-like superfamily FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 SUPERFAMILY SSF52440 2 122 3.74E-47 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.2E-48 T 17-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.522 T 17-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 3.5E-79 T 17-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 Gene3D G3DSA:3.40.50.20 1 129 2.9E-52 T 17-10-2018 FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 6.4E-140 T 17-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 Gene3D G3DSA:3.30.470.20 197 300 1.1E-39 T 17-10-2018 FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 SUPERFAMILY SSF56059 123 313 1.08E-59 T 17-10-2018 FORC55_2320 6ad16a7b5039e7840291757fbde54e91 318 Gene3D G3DSA:3.30.1490.20 138 196 8.9E-30 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_1643 f412e9ee099ab245c45fe3eeb19870c3 741 SUPERFAMILY SSF53659 5 740 0.0 T 17-10-2018 FORC55_1643 f412e9ee099ab245c45fe3eeb19870c3 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 17-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 FORC55_1643 f412e9ee099ab245c45fe3eeb19870c3 741 Gene3D G3DSA:3.40.718.10 414 650 1.0E-9 T 17-10-2018 FORC55_1643 f412e9ee099ab245c45fe3eeb19870c3 741 PIRSF PIRSF009407 1 741 0.0 T 17-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 FORC55_1643 f412e9ee099ab245c45fe3eeb19870c3 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 17-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 FORC55_1822 2abc4c90c5f542acbd5f438d2bf53f23 156 SUPERFAMILY SSF75217 2 154 2.46E-50 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_1822 2abc4c90c5f542acbd5f438d2bf53f23 156 PIRSF PIRSF004505 1 155 2.4E-43 T 17-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 FORC55_1822 2abc4c90c5f542acbd5f438d2bf53f23 156 Gene3D G3DSA:3.40.1280.10 1 156 5.4E-53 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_1822 2abc4c90c5f542acbd5f438d2bf53f23 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 8.0E-78 T 17-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 FORC55_1822 2abc4c90c5f542acbd5f438d2bf53f23 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.3E-48 T 17-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 FORC55_1822 2abc4c90c5f542acbd5f438d2bf53f23 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.807 T 17-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 FORC55_1653 70d06f92f884fd72610d66c11a093cc0 533 Pfam PF03553 Na+/H+ antiporter family 165 497 9.9E-107 T 17-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 FORC55_0256 eeb9fae753c1a051e44f5c2c866850b9 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 73.189 T 17-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 FORC55_0256 eeb9fae753c1a051e44f5c2c866850b9 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 3.9E-121 T 17-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 FORC55_0256 eeb9fae753c1a051e44f5c2c866850b9 361 SUPERFAMILY SSF56796 4 356 2.22E-119 T 17-10-2018 FORC55_0256 eeb9fae753c1a051e44f5c2c866850b9 361 PIRSF PIRSF001455 17 359 7.7E-108 T 17-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 FORC55_0256 eeb9fae753c1a051e44f5c2c866850b9 361 Gene3D G3DSA:3.40.50.1970 1 171 3.3E-67 T 17-10-2018 FORC55_0256 eeb9fae753c1a051e44f5c2c866850b9 361 Pfam PF01761 3-dehydroquinate synthase 67 324 7.6E-114 T 17-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 FORC55_0256 eeb9fae753c1a051e44f5c2c866850b9 361 Gene3D G3DSA:1.20.1090.10 172 361 2.2E-74 T 17-10-2018 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 9.0E-47 T 17-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 6.3E-57 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.289 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 5.6E-40 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 5.6E-40 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 5.6E-40 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 5.6E-40 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 SUPERFAMILY SSF54686 3 133 8.24E-53 T 17-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 17-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0295 261f20348a0cd4556c45cbbf13393d93 136 Gene3D G3DSA:3.90.1170.10 1 136 3.6E-54 T 17-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_0457 603ac26cc06af11b18c4098b4694209b 250 Pfam PF13098 Thioredoxin-like domain 118 246 1.4E-25 T 17-10-2018 IPR012336 Thioredoxin-like fold FORC55_0457 603ac26cc06af11b18c4098b4694209b 250 ProSitePatterns PS00194 Thioredoxin family active site. 125 143 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 FORC55_0457 603ac26cc06af11b18c4098b4694209b 250 SUPERFAMILY SSF54423 32 87 8.24E-14 T 17-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 FORC55_0457 603ac26cc06af11b18c4098b4694209b 250 Gene3D G3DSA:3.10.450.70 25 89 1.5E-19 T 17-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 FORC55_0457 603ac26cc06af11b18c4098b4694209b 250 Gene3D G3DSA:3.40.30.10 92 249 1.2E-46 T 17-10-2018 FORC55_0457 603ac26cc06af11b18c4098b4694209b 250 Pfam PF10411 Disulfide bond isomerase protein N-terminus 35 86 8.5E-15 T 17-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal FORC55_0457 603ac26cc06af11b18c4098b4694209b 250 SUPERFAMILY SSF52833 107 247 2.52E-38 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0048 53a8e779a4830c75d1d1594b6a83c712 258 Gene3D G3DSA:3.40.50.720 2 250 1.4E-82 T 17-10-2018 FORC55_0048 53a8e779a4830c75d1d1594b6a83c712 258 SUPERFAMILY SSF69572 2 244 1.83E-74 T 17-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 FORC55_0048 53a8e779a4830c75d1d1594b6a83c712 258 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 9 209 2.4E-84 T 17-10-2018 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 FORC55_0048 53a8e779a4830c75d1d1594b6a83c712 258 Pfam PF00899 ThiF family 10 241 1.5E-57 T 17-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:2.40.30.20 1 93 1.6E-29 T 17-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.6E-13 T 17-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.2E-44 T 17-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF52540 96 381 3.54E-96 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:1.20.150.20 383 513 2.5E-47 T 17-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF47917 383 511 3.4E-45 T 17-10-2018 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.766 T 17-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:3.40.50.300 94 382 1.4E-131 T 17-10-2018 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF50615 10 94 5.69E-26 T 17-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 17-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 6.9E-73 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_2648 a27a017758a0ec43686328536a8e8faa 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 4.4E-252 T 17-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2480 2a5bc4af1cf3d69b880cd15c6118befa 209 Pfam PF00929 Exonuclease 31 193 5.5E-20 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_2480 2a5bc4af1cf3d69b880cd15c6118befa 209 SUPERFAMILY SSF53098 25 199 1.78E-35 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2480 2a5bc4af1cf3d69b880cd15c6118befa 209 SMART SM00479 29 202 8.1E-22 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_2480 2a5bc4af1cf3d69b880cd15c6118befa 209 Gene3D G3DSA:3.30.420.10 22 201 4.1E-34 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_2031 504d75020b507ebfe1f20218d7b98783 241 Pfam PF13525 Outer membrane lipoprotein 26 235 1.2E-81 T 17-10-2018 IPR039565 Outer membrane lipoprotein BamD-like FORC55_2031 504d75020b507ebfe1f20218d7b98783 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 239 1.2E-79 T 17-10-2018 IPR017689 Outer membrane protein assembly factor BamD FORC55_2031 504d75020b507ebfe1f20218d7b98783 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 38.356 T 17-10-2018 IPR017689 Outer membrane protein assembly factor BamD FORC55_2031 504d75020b507ebfe1f20218d7b98783 241 SUPERFAMILY SSF48452 24 119 4.14E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2031 504d75020b507ebfe1f20218d7b98783 241 Gene3D G3DSA:1.25.40.10 28 240 1.0E-54 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1601 0a6f3828a34fdbea00e84a3e1364ada0 417 Gene3D G3DSA:3.40.640.10 33 289 4.8E-131 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1601 0a6f3828a34fdbea00e84a3e1364ada0 417 Pfam PF00266 Aminotransferase class-V 25 401 4.0E-67 T 17-10-2018 IPR000192 Aminotransferase class V domain FORC55_1601 0a6f3828a34fdbea00e84a3e1364ada0 417 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 405 1.5E-188 T 17-10-2018 IPR011340 Cysteine desulfurase-related FORC55_1601 0a6f3828a34fdbea00e84a3e1364ada0 417 Gene3D G3DSA:3.90.1150.10 24 404 4.8E-131 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1601 0a6f3828a34fdbea00e84a3e1364ada0 417 SUPERFAMILY SSF53383 5 409 3.36E-92 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1949 857c52cd82b94ddca36c62248b37a8f6 291 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 285 4.3E-141 T 17-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 FORC55_1949 857c52cd82b94ddca36c62248b37a8f6 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 225 7.7E-87 T 17-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 FORC55_1949 857c52cd82b94ddca36c62248b37a8f6 291 SUPERFAMILY SSF51621 2 235 3.38E-61 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_1949 857c52cd82b94ddca36c62248b37a8f6 291 Gene3D G3DSA:3.20.20.60 1 289 1.3E-89 T 17-10-2018 FORC55_1949 857c52cd82b94ddca36c62248b37a8f6 291 PIRSF PIRSF015582 1 291 2.5E-76 T 17-10-2018 IPR011206 Citrate lyase beta subunit-like FORC55_3578 db90277e89f371af88364d062f70f714 619 SUPERFAMILY SSF52540 350 601 2.05E-89 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3578 db90277e89f371af88364d062f70f714 619 Gene3D G3DSA:1.20.1560.10 10 334 3.4E-28 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_3578 db90277e89f371af88364d062f70f714 619 SMART SM00382 386 577 4.7E-19 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3578 db90277e89f371af88364d062f70f714 619 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3578 db90277e89f371af88364d062f70f714 619 SUPERFAMILY SSF90123 25 342 6.67E-53 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_3578 db90277e89f371af88364d062f70f714 619 Pfam PF00005 ABC transporter 378 531 2.0E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3578 db90277e89f371af88364d062f70f714 619 Gene3D G3DSA:3.40.50.300 351 604 1.8E-91 T 17-10-2018 FORC55_3578 db90277e89f371af88364d062f70f714 619 Pfam PF00664 ABC transporter transmembrane region 40 309 2.3E-19 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 FORC55_0578 a8317c9fc8a19260023ffd20bd047376 451 SUPERFAMILY SSF161070 7 450 1.96E-118 T 17-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 FORC55_0578 a8317c9fc8a19260023ffd20bd047376 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 3.2E-10 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0578 a8317c9fc8a19260023ffd20bd047376 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 3.2E-10 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0578 a8317c9fc8a19260023ffd20bd047376 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 3.2E-10 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0578 a8317c9fc8a19260023ffd20bd047376 451 Pfam PF00209 Sodium:neurotransmitter symporter family 7 132 4.2E-22 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0578 a8317c9fc8a19260023ffd20bd047376 451 Pfam PF00209 Sodium:neurotransmitter symporter family 151 449 5.0E-26 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 PIRSF PIRSF000149 1 331 1.4E-116 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 2.0E-118 T 17-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 17-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 SUPERFAMILY SSF51735 1 179 3.9E-53 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 100 9.6E-32 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 SMART SM00846 3 152 4.2E-71 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 SUPERFAMILY SSF55347 152 314 4.46E-64 T 17-10-2018 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.4E-28 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.4E-28 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.4E-28 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.4E-28 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.4E-28 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 Gene3D G3DSA:3.30.360.10 151 315 2.0E-127 T 17-10-2018 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.6E-59 T 17-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_1712 e029dac70feccf3bf01af67b846e06ff 333 Gene3D G3DSA:3.40.50.720 4 327 2.0E-127 T 17-10-2018 FORC55_0865 d8c4aceebb6083dfa68a91811c754117 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 8 259 34.477 T 17-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 FORC55_0865 d8c4aceebb6083dfa68a91811c754117 263 SUPERFAMILY SSF53474 11 260 9.32E-46 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0865 d8c4aceebb6083dfa68a91811c754117 263 Pfam PF12697 Alpha/beta hydrolase family 18 252 9.3E-20 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_0865 d8c4aceebb6083dfa68a91811c754117 263 Gene3D G3DSA:3.40.50.1820 1 263 1.4E-76 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0865 d8c4aceebb6083dfa68a91811c754117 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 259 4.6E-85 T 17-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 FORC55_2158 817998125d1432988af666b1c561af61 637 Gene3D G3DSA:1.10.3210.40 1 183 2.7E-16 T 17-10-2018 FORC55_2158 817998125d1432988af666b1c561af61 637 SMART SM00471 12 180 0.0033 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_2158 817998125d1432988af666b1c561af61 637 Pfam PF07514 Putative helicase 1 274 1.1E-105 T 17-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative FORC55_2158 817998125d1432988af666b1c561af61 637 SUPERFAMILY SSF109604 17 173 4.13E-7 T 17-10-2018 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Pfam PF13361 UvrD-like helicase C-terminal domain 708 813 5.1E-12 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Pfam PF12705 PD-(D/E)XK nuclease superfamily 966 1174 2.3E-6 T 17-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Gene3D G3DSA:3.40.50.300 446 849 8.8E-155 T 17-10-2018 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 SUPERFAMILY SSF52540 16 825 2.94E-106 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 437 1.4E-56 T 17-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Gene3D G3DSA:1.10.3170.10 160 350 6.9E-149 T 17-10-2018 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 SUPERFAMILY SSF52980 904 1190 2.09E-83 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Gene3D G3DSA:3.40.50.300 12 437 6.9E-149 T 17-10-2018 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 10 1190 22.905 T 17-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 12 1189 0.0 T 17-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Gene3D G3DSA:3.90.320.10 895 1196 9.0E-101 T 17-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal FORC55_0547 62448a0cce4acbd1598bca8f63a7bd9a 1208 Gene3D G3DSA:1.10.486.10 584 732 8.8E-155 T 17-10-2018 FORC55_0878 41e479b0e7e185972fd7a2c2783f9241 92 Pfam PF05166 YcgL domain 3 74 3.0E-32 T 17-10-2018 IPR027354 YcgL domain FORC55_0878 41e479b0e7e185972fd7a2c2783f9241 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 6.0E-34 T 17-10-2018 IPR027354 YcgL domain FORC55_0878 41e479b0e7e185972fd7a2c2783f9241 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.75 T 17-10-2018 IPR027354 YcgL domain FORC55_0878 41e479b0e7e185972fd7a2c2783f9241 92 SUPERFAMILY SSF160191 1 90 1.44E-37 T 17-10-2018 IPR038068 YcgL-like superfamily FORC55_0878 41e479b0e7e185972fd7a2c2783f9241 92 Gene3D G3DSA:3.10.510.20 1 73 8.9E-31 T 17-10-2018 IPR038068 YcgL-like superfamily FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 SUPERFAMILY SSF100920 383 539 1.12E-59 T 17-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 Gene3D G3DSA:3.30.420.40 179 365 1.9E-169 T 17-10-2018 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 SUPERFAMILY SSF53067 1 182 2.36E-66 T 17-10-2018 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 7.2E-288 T 17-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 Pfam PF00012 Hsp70 protein 4 601 3.9E-265 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 Gene3D G3DSA:3.30.420.40 5 378 1.9E-169 T 17-10-2018 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 SUPERFAMILY SSF53067 186 381 7.13E-67 T 17-10-2018 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 Gene3D G3DSA:2.60.34.10 382 522 1.7E-64 T 17-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 Gene3D G3DSA:1.20.1270.10 523 602 9.6E-26 T 17-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 630 36.446 T 17-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 Gene3D G3DSA:3.90.640.10 228 315 1.9E-169 T 17-10-2018 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 SUPERFAMILY SSF100934 534 608 3.18E-5 T 17-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 468 484 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 53 61 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 333 349 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 387 406 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 137 157 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 197 207 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1908 70b902bfc6beb5cbdbbfaed714547ede 635 PRINTS PR00301 70kDa heat shock protein signature 364 384 7.1E-79 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 Gene3D G3DSA:3.40.50.1000 443 709 1.7E-81 T 17-10-2018 IPR023214 HAD superfamily FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 SUPERFAMILY SSF56784 460 757 1.24E-48 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 SUPERFAMILY SSF55008 71 138 1.11E-13 T 17-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 737 5.8E-78 T 17-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 SUPERFAMILY SSF81665 215 739 2.75E-20 T 17-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 SUPERFAMILY SSF81653 265 361 1.23E-20 T 17-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 Gene3D G3DSA:3.30.70.100 73 141 1.2E-14 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 Pfam PF00403 Heavy-metal-associated domain 79 135 2.0E-9 T 17-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 458 670 2.9E-39 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 Gene3D G3DSA:3.40.1110.10 473 591 1.7E-81 T 17-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 Gene3D G3DSA:2.70.150.20 262 366 7.0E-30 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 ProSitePatterns PS01229 Hypothetical cof family signature 2. 657 679 - T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 464 470 - T 17-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 Pfam PF00122 E1-E2 ATPase 263 442 3.2E-47 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 6.2E-172 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 79 108 - T 17-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 1.1E-27 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 476 1.1E-27 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 1.1E-27 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 1.1E-27 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 1.1E-27 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 1.1E-27 T 17-10-2018 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00941 Cadmium-transporting ATPase signature 88 109 2.1E-5 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00941 Cadmium-transporting ATPase signature 346 360 2.1E-5 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_1749 3c954d92f3a39f128b3ff8f959bba68d 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 2.1E-5 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_2788 4bf5e94bd5401ee19b5ac34f03062ac9 495 Gene3D G3DSA:2.60.200.20 4 116 3.9E-8 T 17-10-2018 FORC55_2788 4bf5e94bd5401ee19b5ac34f03062ac9 495 Pfam PF00498 FHA domain 35 102 1.1E-5 T 17-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 FORC55_2788 4bf5e94bd5401ee19b5ac34f03062ac9 495 SUPERFAMILY SSF49879 25 111 3.16E-9 T 17-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 FORC55_2788 4bf5e94bd5401ee19b5ac34f03062ac9 495 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 9 489 5.5E-79 T 17-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 SUPERFAMILY SSF47384 440 509 8.44E-11 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 664 7.6E-21 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 1.5E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 SUPERFAMILY SSF55874 502 664 7.33E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 Pfam PF17202 Single cache domain 3 201 314 1.7E-24 T 17-10-2018 IPR033463 Single cache domain 3 FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 Gene3D G3DSA:3.30.565.10 517 673 2.2E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 4.5E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 4.5E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 4.5E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 4.5E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 SUPERFAMILY SSF103190 156 306 8.16E-15 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 Gene3D G3DSA:1.10.287.130 437 510 1.9E-20 T 17-10-2018 FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 SMART SM00387 555 666 1.3E-29 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1303 6d0c9327e55d60e64db98dba504db86a 677 SMART SM00388 445 512 5.7E-8 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3596 2367a7b5ba0b8ba00643e429d7482846 157 Gene3D G3DSA:3.30.160.70 1 70 8.5E-20 T 17-10-2018 FORC55_3596 2367a7b5ba0b8ba00643e429d7482846 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 1.1E-38 T 17-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 FORC55_3596 2367a7b5ba0b8ba00643e429d7482846 157 Gene3D G3DSA:1.10.10.10 74 157 4.3E-38 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3596 2367a7b5ba0b8ba00643e429d7482846 157 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 44.254 T 17-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 FORC55_3596 2367a7b5ba0b8ba00643e429d7482846 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 17-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 FORC55_3596 2367a7b5ba0b8ba00643e429d7482846 157 SUPERFAMILY SSF46767 74 155 9.03E-34 T 17-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 FORC55_3596 2367a7b5ba0b8ba00643e429d7482846 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 5.9E-34 T 17-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 FORC55_3596 2367a7b5ba0b8ba00643e429d7482846 157 SUPERFAMILY SSF53155 4 79 2.55E-20 T 17-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 FORC55_2152 fb02a6850ca02b221b27a5ae05190c49 208 Pfam PF05309 TraE protein 2 177 1.8E-30 T 17-10-2018 IPR007973 Pilus assembly TraE GO:0000746 FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 SUPERFAMILY SSF117916 98 187 1.79E-22 T 17-10-2018 IPR034904 Fe-S cluster assembly domain superfamily FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 6.0E-95 T 17-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 SUPERFAMILY SSF89360 4 100 3.92E-22 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 Pfam PF01106 NifU-like domain 114 179 4.7E-19 T 17-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.497 T 17-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 101 2.5E-12 T 17-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 Gene3D G3DSA:3.30.300.130 104 192 3.1E-19 T 17-10-2018 IPR034904 Fe-S cluster assembly domain superfamily FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 2.0E-28 T 17-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 FORC55_0165 de273ddcae90c9c6fe657d0bc46e1f70 195 Gene3D G3DSA:2.60.300.12 4 101 5.2E-14 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 FORC55_3404 a66697468f9216656eaefb6546193d08 338 Gene3D G3DSA:3.90.25.10 193 328 4.9E-140 T 17-10-2018 FORC55_3404 a66697468f9216656eaefb6546193d08 338 SUPERFAMILY SSF51735 1 335 2.52E-96 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3404 a66697468f9216656eaefb6546193d08 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 6.2E-63 T 17-10-2018 IPR016040 NAD(P)-binding domain FORC55_3404 a66697468f9216656eaefb6546193d08 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 2.0E-5 T 17-10-2018 FORC55_3404 a66697468f9216656eaefb6546193d08 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.0E-5 T 17-10-2018 FORC55_3404 a66697468f9216656eaefb6546193d08 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.0E-5 T 17-10-2018 FORC55_3404 a66697468f9216656eaefb6546193d08 338 Gene3D G3DSA:3.40.50.720 3 273 4.9E-140 T 17-10-2018 FORC55_3404 a66697468f9216656eaefb6546193d08 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.7E-141 T 17-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 PIRSF PIRSF000124 3 413 1.9E-82 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 PIRSF PIRSF500136 1 413 2.8E-147 T 17-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 SUPERFAMILY SSF51735 4 199 2.52E-46 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 Gene3D G3DSA:3.40.50.720 1 204 3.1E-66 T 17-10-2018 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 SUPERFAMILY SSF48179 206 299 5.78E-29 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 412 3.0E-21 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 SMART SM00984 316 413 2.5E-21 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 Gene3D G3DSA:3.40.50.720 205 413 8.9E-60 T 17-10-2018 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 6.7E-27 T 17-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 SUPERFAMILY SSF52413 306 412 1.83E-23 T 17-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 189 5.1E-59 T 17-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 FORC55_1854 019ba30ecc819f9c29d178cf28cd88ca 413 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 410 7.7E-124 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 146 2.2E-58 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 SUPERFAMILY SSF54611 4 142 5.67E-51 T 17-10-2018 IPR035958 SecB-like superfamily FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 124 142 4.2E-39 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 74 94 4.2E-39 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 14 31 4.2E-39 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 98 120 4.2E-39 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 Gene3D G3DSA:3.10.420.10 2 153 5.2E-58 T 17-10-2018 IPR035958 SecB-like superfamily FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 146 32.261 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 FORC55_0235 c11fe6565d8c0a65a4569a348644d5d7 154 Pfam PF02556 Preprotein translocase subunit SecB 6 145 4.6E-55 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 FORC55_1327 43158670a5635e36de363d001fdeebe0 665 Pfam PF08180 B melanoma antigen family 9 36 1.3E-9 T 17-10-2018 IPR012530 B melanoma antigen-like FORC55_1327 43158670a5635e36de363d001fdeebe0 665 Gene3D G3DSA:2.30.42.10 237 321 2.9E-11 T 17-10-2018 FORC55_1327 43158670a5635e36de363d001fdeebe0 665 Gene3D G3DSA:3.90.226.10 325 545 8.6E-58 T 17-10-2018 FORC55_1327 43158670a5635e36de363d001fdeebe0 665 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 548 1.5E-111 T 17-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 FORC55_1327 43158670a5635e36de363d001fdeebe0 665 SUPERFAMILY SSF52096 167 532 8.12E-72 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_1327 43158670a5635e36de363d001fdeebe0 665 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 2.7E-13 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_1327 43158670a5635e36de363d001fdeebe0 665 SMART SM00245 327 528 1.8E-67 T 17-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 FORC55_1327 43158670a5635e36de363d001fdeebe0 665 SUPERFAMILY SSF50156 218 338 3.71E-15 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 FORC55_1327 43158670a5635e36de363d001fdeebe0 665 SMART SM00228 247 324 5.8E-9 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_1327 43158670a5635e36de363d001fdeebe0 665 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 663 3.5E-41 T 17-10-2018 IPR020992 Tail specific protease, C-terminal FORC55_1327 43158670a5635e36de363d001fdeebe0 665 Pfam PF03572 Peptidase family S41 357 526 2.0E-51 T 17-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 FORC55_2458 c71d8d323568f3585c8f87f14d127938 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.936 T 17-10-2018 IPR022973 Ribosomal protein L10 FORC55_2458 c71d8d323568f3585c8f87f14d127938 162 Pfam PF00466 Ribosomal protein L10 5 101 1.8E-26 T 17-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 FORC55_2458 c71d8d323568f3585c8f87f14d127938 162 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 17-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2458 c71d8d323568f3585c8f87f14d127938 162 SUPERFAMILY SSF160369 4 158 4.71E-44 T 17-10-2018 FORC55_2458 c71d8d323568f3585c8f87f14d127938 162 Gene3D G3DSA:3.30.70.1730 1 124 6.2E-34 T 17-10-2018 FORC55_3480 fa83fcac58d494dbf9d0f06219c9a375 422 PIRSF PIRSF001434 1 422 1.0E-127 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 FORC55_3480 fa83fcac58d494dbf9d0f06219c9a375 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 3.0E-138 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 FORC55_3480 fa83fcac58d494dbf9d0f06219c9a375 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 9.4E-197 T 17-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 FORC55_3480 fa83fcac58d494dbf9d0f06219c9a375 422 SUPERFAMILY SSF53383 1 421 1.32E-129 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3480 fa83fcac58d494dbf9d0f06219c9a375 422 Gene3D G3DSA:3.90.1150.10 289 422 7.9E-53 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3480 fa83fcac58d494dbf9d0f06219c9a375 422 Gene3D G3DSA:3.40.640.10 1 285 8.2E-99 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_0949 49373133d872bab6626e36769b487922 1155 Gene3D G3DSA:3.30.2060.10 130 215 2.8E-120 T 17-10-2018 FORC55_0949 49373133d872bab6626e36769b487922 1155 Gene3D G3DSA:3.90.1150.50 1006 1153 1.0E-44 T 17-10-2018 IPR037235 TRCF-like, C-terminal domain FORC55_0949 49373133d872bab6626e36769b487922 1155 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 37 1114 28.107 T 17-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 FORC55_0949 49373133d872bab6626e36769b487922 1155 Gene3D G3DSA:3.40.50.11140 355 453 2.8E-36 T 17-10-2018 FORC55_0949 49373133d872bab6626e36769b487922 1155 SUPERFAMILY SSF52540 525 785 9.58E-65 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0949 49373133d872bab6626e36769b487922 1155 Pfam PF03461 TRCF domain 1012 1102 1.6E-27 T 17-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 FORC55_0949 49373133d872bab6626e36769b487922 1155 SMART SM00490 828 912 5.8E-19 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0949 49373133d872bab6626e36769b487922 1155 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1084 0.0 T 17-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 FORC55_0949 49373133d872bab6626e36769b487922 1155 Pfam PF00271 Helicase conserved C-terminal domain 809 911 3.1E-16 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0949 49373133d872bab6626e36769b487922 1155 SMART SM00487 602 792 1.1E-33 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_0949 49373133d872bab6626e36769b487922 1155 SUPERFAMILY SSF143517 1000 1149 3.92E-42 T 17-10-2018 IPR037235 TRCF-like, C-terminal domain FORC55_0949 49373133d872bab6626e36769b487922 1155 SUPERFAMILY SSF141259 472 550 1.12E-24 T 17-10-2018 IPR036101 CarD-like/TRCF domain superfamily FORC55_0949 49373133d872bab6626e36769b487922 1155 Gene3D G3DSA:3.40.50.300 544 783 1.6E-236 T 17-10-2018 FORC55_0949 49373133d872bab6626e36769b487922 1155 Gene3D G3DSA:2.30.30.840 485 543 1.6E-236 T 17-10-2018 FORC55_0949 49373133d872bab6626e36769b487922 1155 Gene3D G3DSA:3.40.50.300 480 992 1.6E-236 T 17-10-2018 FORC55_0949 49373133d872bab6626e36769b487922 1155 SUPERFAMILY SSF52540 351 467 1.29E-28 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0949 49373133d872bab6626e36769b487922 1155 Pfam PF00270 DEAD/DEAH box helicase 607 767 9.5E-21 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_0949 49373133d872bab6626e36769b487922 1155 Gene3D G3DSA:3.40.50.11180 26 333 2.8E-120 T 17-10-2018 FORC55_0949 49373133d872bab6626e36769b487922 1155 SUPERFAMILY SSF52540 784 992 1.68E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0949 49373133d872bab6626e36769b487922 1155 SMART SM00982 1010 1110 2.3E-46 T 17-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 FORC55_0949 49373133d872bab6626e36769b487922 1155 SMART SM01058 481 578 9.2E-50 T 17-10-2018 IPR003711 CarD-like/TRCF domain FORC55_0949 49373133d872bab6626e36769b487922 1155 Pfam PF02559 CarD-like/TRCF domain 482 577 1.8E-25 T 17-10-2018 IPR003711 CarD-like/TRCF domain FORC55_0949 49373133d872bab6626e36769b487922 1155 SUPERFAMILY SSF52540 15 344 1.04E-97 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0344 33ea931e1eeefc2e8e3d6d97531b718d 238 Pfam PF00005 ABC transporter 19 157 1.1E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0344 33ea931e1eeefc2e8e3d6d97531b718d 238 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 1.1E-118 T 17-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 FORC55_0344 33ea931e1eeefc2e8e3d6d97531b718d 238 SUPERFAMILY SSF52540 1 230 3.84E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0344 33ea931e1eeefc2e8e3d6d97531b718d 238 SMART SM00382 24 207 2.5E-18 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0344 33ea931e1eeefc2e8e3d6d97531b718d 238 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0344 33ea931e1eeefc2e8e3d6d97531b718d 238 Gene3D G3DSA:3.40.50.300 2 238 5.9E-63 T 17-10-2018 FORC55_0225 6de61bd367e7637163184267efeedf49 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.8E-253 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_0225 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF54849 137 203 3.2E-24 T 17-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily FORC55_0225 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:1.10.560.10 8 521 3.1E-239 T 17-10-2018 IPR027413 GroEL-like equatorial domain superfamily FORC55_0225 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF48592 7 521 9.92E-77 T 17-10-2018 IPR027413 GroEL-like equatorial domain superfamily FORC55_0225 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:3.30.260.10 138 410 3.1E-239 T 17-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily FORC55_0225 6de61bd367e7637163184267efeedf49 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.524 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_0225 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_0225 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_0225 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_0225 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_0225 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_0225 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF52029 185 376 2.27E-83 T 17-10-2018 IPR027409 GroEL-like apical domain superfamily FORC55_0225 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:3.50.7.10 173 379 3.1E-239 T 17-10-2018 IPR027409 GroEL-like apical domain superfamily FORC55_0225 6de61bd367e7637163184267efeedf49 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 17-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 FORC55_0225 6de61bd367e7637163184267efeedf49 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.5E-95 T 17-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 FORC55_0513 4748c86e8582b7bfbd421692e5f3cbb6 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.257 T 17-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_0513 4748c86e8582b7bfbd421692e5f3cbb6 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 17-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_0513 4748c86e8582b7bfbd421692e5f3cbb6 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 4.2E-88 T 17-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_0513 4748c86e8582b7bfbd421692e5f3cbb6 226 SMART SM00987 49 210 8.7E-41 T 17-10-2018 FORC55_0513 4748c86e8582b7bfbd421692e5f3cbb6 226 Gene3D G3DSA:3.40.470.10 1 226 7.0E-107 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_0513 4748c86e8582b7bfbd421692e5f3cbb6 226 SUPERFAMILY SSF52141 6 221 2.83E-96 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_0513 4748c86e8582b7bfbd421692e5f3cbb6 226 SMART SM00986 49 210 8.7E-41 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_0513 4748c86e8582b7bfbd421692e5f3cbb6 226 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.1E-25 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_1867 4e22acba6b301df2111fce7bd1a6a9db 182 Gene3D G3DSA:3.40.1580.20 1 181 1.8E-69 T 17-10-2018 IPR038228 Syd superfamily FORC55_1867 4e22acba6b301df2111fce7bd1a6a9db 182 Pfam PF07348 Syd protein (SUKH-2) 7 179 6.8E-70 T 17-10-2018 IPR009948 Syd GO:0009898 FORC55_1867 4e22acba6b301df2111fce7bd1a6a9db 182 Hamap MF_01104 Protein Syd [syd]. 3 181 37.782 T 17-10-2018 IPR009948 Syd GO:0009898 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 SUPERFAMILY SSF55874 299 461 3.01E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 1.4E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 1.4E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.4E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 SMART SM00304 193 246 2.9E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 Gene3D G3DSA:3.30.565.10 314 462 1.7E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 SMART SM00387 353 463 9.0E-29 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 Gene3D G3DSA:3.30.450.210 33 160 1.2E-54 T 17-10-2018 IPR038515 CpxA, periplasmic domain superfamily FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 38 171 3.0E-60 T 17-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 Gene3D G3DSA:1.10.287.130 197 311 6.7E-33 T 17-10-2018 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 Pfam PF00672 HAMP domain 194 241 3.9E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 307 5.0E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 462 2.4E-18 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 SUPERFAMILY SSF47384 232 308 5.69E-14 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0198 3a59efb2783ff7a96a8766d4b44a3b4d 464 SMART SM00388 247 309 1.1E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 8.9E-117 T 17-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 Gene3D G3DSA:1.10.3860.10 4 417 1.2E-116 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 SUPERFAMILY SSF118215 15 403 5.36E-109 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.2E-44 T 17-10-2018 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.2E-44 T 17-10-2018 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.2E-44 T 17-10-2018 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.2E-44 T 17-10-2018 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.2E-44 T 17-10-2018 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.2E-44 T 17-10-2018 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.2E-44 T 17-10-2018 FORC55_1615 ea09b803fddce1d7448101f6a600e287 418 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.2E-44 T 17-10-2018 FORC55_0339 933c860632897cd358d28701a1222441 336 Gene3D G3DSA:3.40.190.80 200 336 2.3E-61 T 17-10-2018 FORC55_0339 933c860632897cd358d28701a1222441 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.47 T 17-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.2E-77 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.2E-77 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.2E-77 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.2E-77 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.2E-77 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.2E-77 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 Gene3D G3DSA:3.30.540.10 4 198 7.8E-77 T 17-10-2018 FORC55_0339 933c860632897cd358d28701a1222441 336 PIRSF PIRSF500210 1 335 1.4E-128 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 17-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.2E-77 T 17-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_0339 933c860632897cd358d28701a1222441 336 SUPERFAMILY SSF56655 2 331 4.51E-114 T 17-10-2018 FORC55_0339 933c860632897cd358d28701a1222441 336 PIRSF PIRSF000904 1 335 3.2E-125 T 17-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 17-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 Gene3D G3DSA:3.40.190.10 135 385 4.3E-133 T 17-10-2018 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 319 1.5E-43 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 Gene3D G3DSA:3.40.190.10 45 354 4.3E-133 T 17-10-2018 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 SUPERFAMILY SSF53850 25 392 1.76E-89 T 17-10-2018 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 PRINTS PR00181 Maltose binding protein signature 67 85 1.5E-79 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 PRINTS PR00181 Maltose binding protein signature 127 146 1.5E-79 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 PRINTS PR00181 Maltose binding protein signature 230 249 1.5E-79 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 PRINTS PR00181 Maltose binding protein signature 168 187 1.5E-79 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 PRINTS PR00181 Maltose binding protein signature 296 317 1.5E-79 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 PRINTS PR00181 Maltose binding protein signature 354 373 1.5E-79 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 PRINTS PR00181 Maltose binding protein signature 148 167 1.5E-79 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3533 b0fb78a82c3c8b3fc5c91a32684f6560 393 PRINTS PR00181 Maltose binding protein signature 33 51 1.5E-79 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3361 f032bd2b1473f05623d023bd246220ed 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 246 3.0E-59 T 17-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 FORC55_3361 f032bd2b1473f05623d023bd246220ed 252 Pfam PF13531 Bacterial extracellular solute-binding protein 24 248 1.6E-43 T 17-10-2018 FORC55_3361 f032bd2b1473f05623d023bd246220ed 252 SUPERFAMILY SSF53850 22 248 1.04E-59 T 17-10-2018 FORC55_3361 f032bd2b1473f05623d023bd246220ed 252 Gene3D G3DSA:3.40.190.10 102 213 1.3E-84 T 17-10-2018 FORC55_3361 f032bd2b1473f05623d023bd246220ed 252 Gene3D G3DSA:3.40.190.10 26 247 1.3E-84 T 17-10-2018 FORC55_3361 f032bd2b1473f05623d023bd246220ed 252 PIRSF PIRSF004846 1 251 1.7E-65 T 17-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 FORC55_2379 055545edcc12e61ebdd4618fb15688ef 170 SUPERFAMILY SSF54523 16 88 1.8E-12 T 17-10-2018 FORC55_2379 055545edcc12e61ebdd4618fb15688ef 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 35 5.2E-7 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2379 055545edcc12e61ebdd4618fb15688ef 170 Gene3D G3DSA:3.30.700.10 16 164 4.0E-9 T 17-10-2018 FORC55_2379 055545edcc12e61ebdd4618fb15688ef 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 7.6E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1204 ab19fe4e7619851688ea98a690c9d6b6 478 SUPERFAMILY SSF51735 1 295 6.2E-41 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1204 ab19fe4e7619851688ea98a690c9d6b6 478 Pfam PF13460 NAD(P)H-binding 8 151 1.0E-11 T 17-10-2018 IPR016040 NAD(P)-binding domain FORC55_1204 ab19fe4e7619851688ea98a690c9d6b6 478 Pfam PF11066 Protein of unknown function (DUF2867) 335 467 7.1E-14 T 17-10-2018 IPR021295 Protein of unknown function DUF2867 FORC55_1204 ab19fe4e7619851688ea98a690c9d6b6 478 Gene3D G3DSA:3.40.50.720 2 261 6.4E-32 T 17-10-2018 FORC55_3174 6684550f853a4de9bce6f6fbc306f5cd 189 SUPERFAMILY SSF101874 23 188 3.14E-49 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily FORC55_3174 6684550f853a4de9bce6f6fbc306f5cd 189 SMART SM00867 24 187 9.7E-67 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like FORC55_3174 6684550f853a4de9bce6f6fbc306f5cd 189 Pfam PF04264 YceI-like domain 25 184 3.5E-37 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like FORC55_3174 6684550f853a4de9bce6f6fbc306f5cd 189 Gene3D G3DSA:2.40.128.110 23 189 1.2E-50 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily FORC55_3174 6684550f853a4de9bce6f6fbc306f5cd 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 43.42 T 17-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI FORC55_2496 3a41397569e58ff8b14e0878682071af 680 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 663 680 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site FORC55_2496 3a41397569e58ff8b14e0878682071af 680 Pfam PF00593 TonB dependent receptor 251 679 3.2E-56 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel FORC55_2496 3a41397569e58ff8b14e0878682071af 680 Gene3D G3DSA:2.170.130.10 34 156 5.7E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily FORC55_2496 3a41397569e58ff8b14e0878682071af 680 Gene3D G3DSA:2.40.170.20 160 680 4.1E-110 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_2496 3a41397569e58ff8b14e0878682071af 680 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 680 9.9E-108 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 FORC55_2496 3a41397569e58ff8b14e0878682071af 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 146 4.8E-22 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_2496 3a41397569e58ff8b14e0878682071af 680 SUPERFAMILY SSF56935 18 680 2.65E-125 T 17-10-2018 FORC55_0408 d87ec20adb1220e987f7b83a8c6dd7a9 190 Gene3D G3DSA:1.10.1740.10 1 121 1.2E-45 T 17-10-2018 FORC55_0408 d87ec20adb1220e987f7b83a8c6dd7a9 190 Pfam PF08281 Sigma-70, region 4 134 181 4.0E-17 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_0408 d87ec20adb1220e987f7b83a8c6dd7a9 190 SUPERFAMILY SSF88659 124 185 2.99E-17 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_0408 d87ec20adb1220e987f7b83a8c6dd7a9 190 Pfam PF04542 Sigma-70 region 2 25 92 9.1E-19 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_0408 d87ec20adb1220e987f7b83a8c6dd7a9 190 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 3.7E-101 T 17-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 FORC55_0408 d87ec20adb1220e987f7b83a8c6dd7a9 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 9.0E-33 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 FORC55_0408 d87ec20adb1220e987f7b83a8c6dd7a9 190 Gene3D G3DSA:1.10.10.10 122 190 5.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0408 d87ec20adb1220e987f7b83a8c6dd7a9 190 SUPERFAMILY SSF88946 2 108 2.2E-33 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_0589 219ce8b8dda18cd9bd463637fc792b6e 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 7.3E-167 T 17-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 FORC55_0589 219ce8b8dda18cd9bd463637fc792b6e 416 PIRSF PIRSF000151 1 416 2.4E-165 T 17-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 FORC55_0589 219ce8b8dda18cd9bd463637fc792b6e 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 17-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 FORC55_0589 219ce8b8dda18cd9bd463637fc792b6e 416 SUPERFAMILY SSF53720 4 408 6.94E-112 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_0589 219ce8b8dda18cd9bd463637fc792b6e 416 Pfam PF00171 Aldehyde dehydrogenase family 8 278 6.5E-15 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 FORC55_0589 219ce8b8dda18cd9bd463637fc792b6e 416 Gene3D G3DSA:3.40.605.10 15 408 1.8E-152 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_0589 219ce8b8dda18cd9bd463637fc792b6e 416 Gene3D G3DSA:3.40.309.10 223 373 1.8E-152 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 FORC55_0589 219ce8b8dda18cd9bd463637fc792b6e 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.028 T 17-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 432 5.4E-14 T 17-10-2018 IPR000014 PAS domain FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 SMART SM00388 466 534 0.0088 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 SMART SM00387 574 684 1.3E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 SMART SM00091 310 377 1.6E-5 T 17-10-2018 IPR000014 PAS domain FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 Gene3D G3DSA:1.10.287.130 443 529 3.2E-13 T 17-10-2018 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 PIRSF PIRSF036431 1 684 5.8E-218 T 17-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 682 3.3E-21 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 Gene3D G3DSA:3.30.565.10 536 684 3.7E-36 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 SUPERFAMILY SSF55874 539 680 1.24E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 Pfam PF00512 His Kinase A (phospho-acceptor) domain 466 528 2.3E-6 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 SUPERFAMILY SSF47384 454 529 3.73E-7 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 SUPERFAMILY SSF55785 300 424 4.0E-15 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 8.4E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 8.4E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 8.4E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 8.4E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 Gene3D G3DSA:3.30.450.20 313 442 4.9E-16 T 17-10-2018 FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 Pfam PF13426 PAS domain 321 425 3.0E-8 T 17-10-2018 IPR000014 PAS domain FORC55_2820 5abb7631c45526a51081762f035f2cbf 684 Gene3D G3DSA:3.30.450.20 55 170 1.9E-12 T 17-10-2018 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 Pfam PF00675 Insulinase (Peptidase family M16) 22 158 1.3E-36 T 17-10-2018 IPR011765 Peptidase M16, N-terminal FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 17-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 Gene3D G3DSA:3.30.830.10 239 466 5.2E-72 T 17-10-2018 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 SUPERFAMILY SSF63411 4 226 2.38E-60 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 Gene3D G3DSA:3.30.830.10 468 850 1.4E-110 T 17-10-2018 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 Gene3D G3DSA:3.30.830.10 1 226 2.1E-85 T 17-10-2018 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 Pfam PF05193 Peptidase M16 inactive domain 646 822 1.6E-11 T 17-10-2018 IPR007863 Peptidase M16, C-terminal FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 Pfam PF05193 Peptidase M16 inactive domain 182 357 1.1E-25 T 17-10-2018 IPR007863 Peptidase M16, C-terminal FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 SUPERFAMILY SSF63411 701 912 6.98E-45 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 Pfam PF16187 Middle or third domain of peptidase_M16 365 642 2.9E-84 T 17-10-2018 IPR032632 Peptidase M16, middle/third domain FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 Gene3D G3DSA:3.30.830.10 616 875 1.4E-110 T 17-10-2018 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 SUPERFAMILY SSF63411 234 457 8.33E-76 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_0774 93f585e0fa1b107a083a6c231d7355d0 923 SUPERFAMILY SSF63411 468 691 3.17E-60 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 SUPERFAMILY SSF51161 295 395 3.68E-17 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 17-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 Pfam PF00483 Nucleotidyl transferase 6 273 7.7E-70 T 17-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 17-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 378 1.1E-154 T 17-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 Gene3D G3DSA:3.90.550.10 1 281 1.0E-92 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 17-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 51.64 T 17-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 SUPERFAMILY SSF53448 3 358 2.58E-79 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_3338 481fcf47e5c1ff5b1a40ab0faa6a8925 407 Gene3D G3DSA:2.160.10.10 282 404 1.2E-32 T 17-10-2018 FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 SUPERFAMILY SSF53383 1 391 5.3E-110 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 Pfam PF00155 Aminotransferase class I and II 26 392 6.9E-80 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 17-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 Gene3D G3DSA:3.40.640.10 60 300 8.4E-156 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.4E-39 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.4E-39 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.4E-39 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.4E-39 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 FORC55_1499 6dc6ee5a88dff3b191f3501615c26b73 396 Gene3D G3DSA:3.90.1150.10 5 392 8.4E-156 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1702 4711bebb04ee434f68b6c24209970c60 121 SUPERFAMILY SSF47226 11 109 1.02E-17 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_1702 4711bebb04ee434f68b6c24209970c60 121 Pfam PF01627 Hpt domain 24 101 2.8E-10 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_1702 4711bebb04ee434f68b6c24209970c60 121 Gene3D G3DSA:1.20.120.160 2 118 3.6E-17 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_2656 04001058ac24138a1c1b2e95a655127a 210 Gene3D G3DSA:3.40.50.150 5 209 2.4E-66 T 17-10-2018 FORC55_2656 04001058ac24138a1c1b2e95a655127a 210 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 7.3E-62 T 17-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 FORC55_2656 04001058ac24138a1c1b2e95a655127a 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.141 T 17-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 FORC55_2656 04001058ac24138a1c1b2e95a655127a 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.1E-57 T 17-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 FORC55_2656 04001058ac24138a1c1b2e95a655127a 210 SUPERFAMILY SSF53335 11 208 3.41E-39 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2656 04001058ac24138a1c1b2e95a655127a 210 PIRSF PIRSF003078 4 209 1.6E-59 T 17-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 FORC55_0941 d5f54c098403cdf464c8079444fadadd 129 Gene3D G3DSA:2.60.40.3230 18 128 8.3E-33 T 17-10-2018 IPR038483 YcfL-like superfamily FORC55_0941 d5f54c098403cdf464c8079444fadadd 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 2.0E-32 T 17-10-2018 IPR010824 Protein of unknown function DUF1425 FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 SUPERFAMILY SSF141868 522 768 4.45E-68 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 506 2.8E-33 T 17-10-2018 IPR000160 GGDEF domain FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 Gene3D G3DSA:3.20.20.450 521 782 2.8E-74 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 503 8.0E-39 T 17-10-2018 IPR000160 GGDEF domain FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 Gene3D G3DSA:1.20.1480.50 242 336 3.1E-7 T 17-10-2018 FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 SMART SM00267 328 507 1.5E-46 T 17-10-2018 IPR000160 GGDEF domain FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 Pfam PF00563 EAL domain 523 755 5.0E-63 T 17-10-2018 IPR001633 EAL domain FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 SUPERFAMILY SSF55073 344 508 1.1E-38 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 SMART SM00052 517 760 7.8E-73 T 17-10-2018 IPR001633 EAL domain FORC55_2035 330dfbe7ff6e99c495fc956e04112fe0 791 Gene3D G3DSA:3.30.70.270 337 520 6.9E-47 T 17-10-2018 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 SUPERFAMILY SSF47413 2 59 1.58E-17 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 SMART SM00354 1 71 8.4E-29 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.1E-18 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 Gene3D G3DSA:3.40.50.2300 160 289 4.7E-68 T 17-10-2018 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 SUPERFAMILY SSF53822 61 315 3.85E-66 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 Gene3D G3DSA:1.10.260.40 1 54 1.8E-22 T 17-10-2018 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 Gene3D G3DSA:3.40.50.2300 55 306 4.7E-68 T 17-10-2018 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.6E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.6E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1505 8e713c04d7a054123ac56fac0501ae80 340 Pfam PF13377 Periplasmic binding protein-like domain 168 320 3.8E-31 T 17-10-2018 FORC55_3440 897d9ddfdd0646a6b59fb1ba999c8551 473 Gene3D G3DSA:3.30.70.260 318 460 1.7E-6 T 17-10-2018 FORC55_3440 897d9ddfdd0646a6b59fb1ba999c8551 473 SUPERFAMILY SSF53633 4 306 1.21E-52 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_3440 897d9ddfdd0646a6b59fb1ba999c8551 473 Gene3D G3DSA:3.40.1160.10 3 307 6.0E-56 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_3440 897d9ddfdd0646a6b59fb1ba999c8551 473 SUPERFAMILY SSF55021 398 461 1.65E-7 T 17-10-2018 FORC55_3440 897d9ddfdd0646a6b59fb1ba999c8551 473 Gene3D G3DSA:3.30.70.260 325 394 1.7E-6 T 17-10-2018 FORC55_3440 897d9ddfdd0646a6b59fb1ba999c8551 473 Pfam PF00696 Amino acid kinase family 4 293 5.1E-24 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 Gene3D G3DSA:2.40.40.20 652 809 7.7E-46 T 17-10-2018 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 SUPERFAMILY SSF53706 47 665 5.23E-162 T 17-10-2018 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 28 2.8E-6 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 Gene3D G3DSA:3.40.50.740 86 566 2.0E-219 T 17-10-2018 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 17-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 1.5E-100 T 17-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 Gene3D G3DSA:3.40.228.10 178 643 2.0E-219 T 17-10-2018 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 Gene3D G3DSA:3.90.55.10 81 617 2.0E-219 T 17-10-2018 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 17-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 SUPERFAMILY SSF50692 670 813 1.29E-40 T 17-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily FORC55_0883 7f1143244b44d5800a4900a9e74411ab 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 2.3E-25 T 17-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 FORC55_1480 d867fbce111612c7b31bb79cbe03be5d 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 463 5.4E-48 T 17-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 FORC55_1480 d867fbce111612c7b31bb79cbe03be5d 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 463 2.4E-76 T 17-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 FORC55_1480 d867fbce111612c7b31bb79cbe03be5d 471 PIRSF PIRSF002457 1 471 1.6E-107 T 17-10-2018 IPR030676 Citrate carrier CitT-related FORC55_0521 27f7f089ac2f5d64c13542de029e6644 259 PIRSF PIRSF001357 5 254 4.7E-77 T 17-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 FORC55_0521 27f7f089ac2f5d64c13542de029e6644 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 231 9.8E-82 T 17-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 FORC55_0521 27f7f089ac2f5d64c13542de029e6644 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 52.885 T 17-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 FORC55_0521 27f7f089ac2f5d64c13542de029e6644 259 SMART SM01133 10 245 1.5E-80 T 17-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 FORC55_0521 27f7f089ac2f5d64c13542de029e6644 259 SUPERFAMILY SSF51569 6 246 5.44E-82 T 17-10-2018 FORC55_0521 27f7f089ac2f5d64c13542de029e6644 259 Gene3D G3DSA:3.20.20.70 1 258 2.3E-102 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0521 27f7f089ac2f5d64c13542de029e6644 259 Pfam PF01791 DeoC/LacD family aldolase 11 240 8.7E-48 T 17-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 FORC55_2567 3f6aa1a37502c9764a39318ff5c92ff0 399 SUPERFAMILY SSF52507 1 181 1.05E-60 T 17-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 FORC55_2567 3f6aa1a37502c9764a39318ff5c92ff0 399 Pfam PF02441 Flavoprotein 7 178 1.9E-43 T 17-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 FORC55_2567 3f6aa1a37502c9764a39318ff5c92ff0 399 Gene3D G3DSA:3.40.50.10300 185 399 9.5E-85 T 17-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 FORC55_2567 3f6aa1a37502c9764a39318ff5c92ff0 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 4.7E-152 T 17-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 FORC55_2567 3f6aa1a37502c9764a39318ff5c92ff0 399 SUPERFAMILY SSF102645 184 398 1.57E-81 T 17-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 FORC55_2567 3f6aa1a37502c9764a39318ff5c92ff0 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 1.1E-75 T 17-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 FORC55_2567 3f6aa1a37502c9764a39318ff5c92ff0 399 Gene3D G3DSA:3.40.50.1950 1 184 3.0E-54 T 17-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 FORC55_2795 2b38daa0e6fffd5f39e19f66848df8f1 469 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 216 465 2.2E-83 T 17-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 FORC55_2795 2b38daa0e6fffd5f39e19f66848df8f1 469 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 125 3.9E-25 T 17-10-2018 IPR010657 ImpA, N-terminal FORC55_2795 2b38daa0e6fffd5f39e19f66848df8f1 469 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 466 2.2E-155 T 17-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 FORC55_2381 d56ea436ef5b2cd62c0cfa2ba4e5d334 196 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 40 5.8E-7 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2381 d56ea436ef5b2cd62c0cfa2ba4e5d334 196 Gene3D G3DSA:3.30.700.10 20 196 2.6E-10 T 17-10-2018 FORC55_2381 d56ea436ef5b2cd62c0cfa2ba4e5d334 196 SUPERFAMILY SSF54523 20 108 7.22E-13 T 17-10-2018 FORC55_2381 d56ea436ef5b2cd62c0cfa2ba4e5d334 196 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2381 d56ea436ef5b2cd62c0cfa2ba4e5d334 196 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 40 1.9E-7 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2721 db43ad413a590960f50cc91188d24dee 223 Pfam PF08668 HDOD domain 1 151 1.6E-39 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD FORC55_2721 db43ad413a590960f50cc91188d24dee 223 SUPERFAMILY SSF109604 1 176 3.42E-41 T 17-10-2018 FORC55_2721 db43ad413a590960f50cc91188d24dee 223 Gene3D G3DSA:1.10.3210.10 1 221 4.7E-52 T 17-10-2018 FORC55_0996 805be558dee0154c88ec090120006c66 135 SUPERFAMILY SSF54637 3 126 6.99E-42 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_0996 805be558dee0154c88ec090120006c66 135 Gene3D G3DSA:3.10.129.10 1 132 3.6E-43 T 17-10-2018 FORC55_0996 805be558dee0154c88ec090120006c66 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 126 1.4E-52 T 17-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 FORC55_0996 805be558dee0154c88ec090120006c66 135 PIRSF PIRSF003230 1 133 2.3E-47 T 17-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 FORC55_0996 805be558dee0154c88ec090120006c66 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 123 8.8E-39 T 17-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 FORC55_0996 805be558dee0154c88ec090120006c66 135 Pfam PF03061 Thioesterase superfamily 18 101 4.2E-21 T 17-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.4E-164 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 SUPERFAMILY SSF53067 154 340 9.52E-51 T 17-10-2018 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 SUPERFAMILY SSF53067 9 152 1.11E-37 T 17-10-2018 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.30.420.40 14 331 1.6E-131 T 17-10-2018 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.90.640.10 190 263 1.6E-131 T 17-10-2018 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.30.420.40 158 321 1.6E-131 T 17-10-2018 FORC55_2374 f06864a691a763c6d420bc53bb6f11bb 347 Pfam PF06723 MreB/Mbl protein 11 338 1.3E-148 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 FORC55_3588 18222840871ffb5551cc31c447296dc0 140 Gene3D G3DSA:3.30.300.20 44 140 3.8E-34 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta FORC55_3588 18222840871ffb5551cc31c447296dc0 140 SUPERFAMILY SSF82784 1 135 9.42E-42 T 17-10-2018 IPR036102 OsmC/Ohr superfamily FORC55_3588 18222840871ffb5551cc31c447296dc0 140 Gene3D G3DSA:2.20.25.10 1 43 3.8E-24 T 17-10-2018 FORC55_3588 18222840871ffb5551cc31c447296dc0 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 3.9E-53 T 17-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 FORC55_3588 18222840871ffb5551cc31c447296dc0 140 Pfam PF02566 OsmC-like protein 38 133 1.6E-18 T 17-10-2018 IPR003718 OsmC/Ohr family FORC55_2751 a9f2c6085d338451ed8d024ebedb5fc7 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2751 a9f2c6085d338451ed8d024ebedb5fc7 251 SMART SM00382 30 222 8.7E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2751 a9f2c6085d338451ed8d024ebedb5fc7 251 Gene3D G3DSA:3.40.50.300 6 248 1.7E-63 T 17-10-2018 FORC55_2751 a9f2c6085d338451ed8d024ebedb5fc7 251 Pfam PF00005 ABC transporter 21 176 1.6E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2751 a9f2c6085d338451ed8d024ebedb5fc7 251 SUPERFAMILY SSF52540 5 238 1.08E-57 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2751 a9f2c6085d338451ed8d024ebedb5fc7 251 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 6 251 3.2E-126 T 17-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 FORC55_0317 1a4aba6479801f454fc181a4b30b87f4 188 Gene3D G3DSA:3.10.450.350 93 186 1.3E-13 T 17-10-2018 FORC55_0317 1a4aba6479801f454fc181a4b30b87f4 188 Pfam PF04225 Opacity-associated protein A LysM-like domain 104 188 9.0E-39 T 17-10-2018 IPR007340 Opacity-associated protein A FORC55_0317 1a4aba6479801f454fc181a4b30b87f4 188 Pfam PF08525 Opacity-associated protein A N-terminal motif 36 62 1.1E-7 T 17-10-2018 IPR013731 Opacity-associated protein A, N-terminal FORC55_1673 b60cdfcf3d068c258b3dd5cca10b8cf2 426 Gene3D G3DSA:3.90.1150.10 9 412 1.7E-171 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1673 b60cdfcf3d068c258b3dd5cca10b8cf2 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_1673 b60cdfcf3d068c258b3dd5cca10b8cf2 426 Gene3D G3DSA:3.40.640.10 58 327 1.7E-171 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1673 b60cdfcf3d068c258b3dd5cca10b8cf2 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.635 T 17-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 FORC55_1673 b60cdfcf3d068c258b3dd5cca10b8cf2 426 Pfam PF00202 Aminotransferase class-III 24 418 7.5E-132 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_1673 b60cdfcf3d068c258b3dd5cca10b8cf2 426 PIRSF PIRSF000521 21 421 5.1E-38 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_1673 b60cdfcf3d068c258b3dd5cca10b8cf2 426 SUPERFAMILY SSF53383 4 420 5.9E-135 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1673 b60cdfcf3d068c258b3dd5cca10b8cf2 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 4.8E-180 T 17-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 FORC55_2178 e830100a7e033beca3e41167194477d4 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.738 T 17-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 FORC55_2178 e830100a7e033beca3e41167194477d4 132 Pfam PF02033 Ribosome-binding factor A 7 110 2.3E-30 T 17-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 FORC55_2178 e830100a7e033beca3e41167194477d4 132 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 17-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 FORC55_2178 e830100a7e033beca3e41167194477d4 132 SUPERFAMILY SSF89919 2 105 1.57E-31 T 17-10-2018 IPR023799 Ribosome-binding factor A domain superfamily FORC55_2178 e830100a7e033beca3e41167194477d4 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 8.0E-47 T 17-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 FORC55_2178 e830100a7e033beca3e41167194477d4 132 Gene3D G3DSA:3.30.300.20 1 106 1.1E-34 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta FORC55_2178 e830100a7e033beca3e41167194477d4 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 115 2.7E-34 T 17-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 FORC55_2873 0d519b784174501713cdf6666c514ca7 280 PRINTS PR00169 Potassium channel signature 119 142 1.4E-7 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 FORC55_2873 0d519b784174501713cdf6666c514ca7 280 PRINTS PR00169 Potassium channel signature 149 171 1.4E-7 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 FORC55_2873 0d519b784174501713cdf6666c514ca7 280 PRINTS PR00169 Potassium channel signature 178 204 1.4E-7 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 FORC55_2873 0d519b784174501713cdf6666c514ca7 280 Gene3D G3DSA:1.10.287.70 14 206 3.7E-38 T 17-10-2018 FORC55_2873 0d519b784174501713cdf6666c514ca7 280 Pfam PF07885 Ion channel 128 205 1.8E-17 T 17-10-2018 IPR013099 Potassium channel domain FORC55_2873 0d519b784174501713cdf6666c514ca7 280 SUPERFAMILY SSF81324 21 206 8.57E-37 T 17-10-2018 FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 17-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 Gene3D G3DSA:1.20.120.910 17 147 2.1E-35 T 17-10-2018 FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 17-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 17-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 1.1E-50 T 17-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 SUPERFAMILY SSF109635 7 106 5.1E-36 T 17-10-2018 IPR037187 DksA, N-terminal domain superfamily FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 107 140 2.4E-10 T 17-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 SUPERFAMILY SSF57716 108 146 4.42E-10 T 17-10-2018 FORC55_2223 d6038e852347d4934fccd25ae3755b57 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.808 T 17-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 FORC55_3252 ada06e38ab3d504a02c2f3b7a7162fd6 282 Gene3D G3DSA:3.30.420.40 128 251 6.7E-18 T 17-10-2018 FORC55_3252 ada06e38ab3d504a02c2f3b7a7162fd6 282 SUPERFAMILY SSF53067 131 251 1.73E-18 T 17-10-2018 FORC55_3252 ada06e38ab3d504a02c2f3b7a7162fd6 282 Pfam PF00480 ROK family 142 247 2.0E-17 T 17-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_0049 8d33bf3057652e93bb0040832db6a56e 66 Gene3D G3DSA:3.10.20.30 1 66 1.5E-18 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_0049 8d33bf3057652e93bb0040832db6a56e 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.0E-16 T 17-10-2018 IPR010035 ThiS, thiamine-biosynthesis FORC55_0049 8d33bf3057652e93bb0040832db6a56e 66 Pfam PF02597 ThiS family 15 66 4.1E-12 T 17-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 FORC55_0049 8d33bf3057652e93bb0040832db6a56e 66 SUPERFAMILY SSF54285 1 66 2.76E-15 T 17-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 Gene3D G3DSA:1.20.1080.10 3 260 1.7E-95 T 17-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.1E-50 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.1E-50 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.1E-50 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.1E-50 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 5.1E-50 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.1E-50 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 Pfam PF00230 Major intrinsic protein 5 252 5.3E-62 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 17-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 5.4E-67 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 FORC55_3378 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 SUPERFAMILY SSF81338 9 256 8.37E-73 T 17-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 FORC55_1431 dcda7ad50a0cc8380a7c846616e3038f 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 17-10-2018 FORC55_1431 dcda7ad50a0cc8380a7c846616e3038f 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 1.3E-26 T 17-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 FORC55_1431 dcda7ad50a0cc8380a7c846616e3038f 273 SUPERFAMILY SSF56784 1 265 6.59E-76 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_1431 dcda7ad50a0cc8380a7c846616e3038f 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 17-10-2018 FORC55_1431 dcda7ad50a0cc8380a7c846616e3038f 273 Gene3D G3DSA:3.30.1240.10 86 191 3.6E-83 T 17-10-2018 FORC55_1431 dcda7ad50a0cc8380a7c846616e3038f 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 1.1E-66 T 17-10-2018 IPR000150 Cof family GO:0016787 FORC55_1431 dcda7ad50a0cc8380a7c846616e3038f 273 Gene3D G3DSA:3.40.50.1000 3 263 3.6E-83 T 17-10-2018 IPR023214 HAD superfamily FORC55_1431 dcda7ad50a0cc8380a7c846616e3038f 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 3.1E-67 T 17-10-2018 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.6E-62 T 17-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.0E-14 T 17-10-2018 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 Pfam PF01330 RuvA N terminal domain 2 62 8.2E-20 T 17-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 SUPERFAMILY SSF46929 159 203 2.49E-12 T 17-10-2018 IPR036267 RuvA, C-terminal domain superfamily FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 SMART SM00278 73 92 160.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 SMART SM00278 108 127 0.046 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 Gene3D G3DSA:1.10.8.10 157 204 6.5E-22 T 17-10-2018 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 Gene3D G3DSA:2.40.50.140 1 65 3.5E-26 T 17-10-2018 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 Gene3D G3DSA:1.10.150.20 67 143 9.7E-26 T 17-10-2018 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.492 T 17-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 SUPERFAMILY SSF47781 66 136 1.67E-20 T 17-10-2018 IPR010994 RuvA domain 2-like FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 SUPERFAMILY SSF50249 2 63 4.68E-18 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0991 bdc100f4433951e5dac122d8c9f92402 204 Pfam PF07499 RuvA, C-terminal domain 160 203 4.4E-17 T 17-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 SUPERFAMILY SSF50341 16 162 8.76E-34 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 SUPERFAMILY SSF52172 180 310 5.69E-22 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 Pfam PF01584 CheW-like domain 21 160 3.0E-35 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 SMART SM00448 184 305 1.7E-9 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 Pfam PF00072 Response regulator receiver domain 186 303 3.2E-14 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:3.40.50.2300 164 311 1.9E-21 T 17-10-2018 FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 SMART SM00260 17 158 6.3E-28 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:2.30.30.40 24 152 1.1E-27 T 17-10-2018 FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 PIRSF PIRSF002867 1 312 1.4E-105 T 17-10-2018 IPR024181 Chemotaxis response regulator CheV FORC55_0836 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:2.40.50.180 39 158 1.1E-27 T 17-10-2018 FORC55_0917 e320db263ce7035a616edc7291762ece 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 226 1.1E-53 T 17-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0917 e320db263ce7035a616edc7291762ece 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 8.5E-58 T 17-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0917 e320db263ce7035a616edc7291762ece 232 SMART SM00934 5 226 4.3E-103 T 17-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0917 e320db263ce7035a616edc7291762ece 232 Gene3D G3DSA:3.20.20.70 1 230 1.7E-88 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0917 e320db263ce7035a616edc7291762ece 232 SUPERFAMILY SSF51366 2 228 9.11E-77 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_0917 e320db263ce7035a616edc7291762ece 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 17-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0917 e320db263ce7035a616edc7291762ece 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.109 T 17-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_1452 7097e50f4c6da9886a7cb6ecaa870017 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 3.4E-14 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain FORC55_1452 7097e50f4c6da9886a7cb6ecaa870017 357 Gene3D G3DSA:3.10.180.10 158 355 4.8E-69 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_1452 7097e50f4c6da9886a7cb6ecaa870017 357 Gene3D G3DSA:3.10.180.10 3 155 9.8E-48 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_1452 7097e50f4c6da9886a7cb6ecaa870017 357 SUPERFAMILY SSF54593 5 341 3.33E-77 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_1452 7097e50f4c6da9886a7cb6ecaa870017 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.5E-134 T 17-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 FORC55_1452 7097e50f4c6da9886a7cb6ecaa870017 357 PIRSF PIRSF009283 1 355 5.2E-125 T 17-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 FORC55_1452 7097e50f4c6da9886a7cb6ecaa870017 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 2.1E-56 T 17-10-2018 FORC55_1228 5918d09d8dd7a7e1071302eaa1192aed 324 Gene3D G3DSA:1.10.287.470 76 205 7.9E-32 T 17-10-2018 FORC55_1228 5918d09d8dd7a7e1071302eaa1192aed 324 SUPERFAMILY SSF111369 114 270 5.49E-5 T 17-10-2018 FORC55_1228 5918d09d8dd7a7e1071302eaa1192aed 324 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 276 3.4E-11 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_1228 5918d09d8dd7a7e1071302eaa1192aed 324 Gene3D G3DSA:2.40.30.170 33 321 7.9E-32 T 17-10-2018 FORC55_1228 5918d09d8dd7a7e1071302eaa1192aed 324 Gene3D G3DSA:2.40.50.100 42 240 7.9E-32 T 17-10-2018 FORC55_1228 5918d09d8dd7a7e1071302eaa1192aed 324 SUPERFAMILY SSF111369 40 102 6.02E-6 T 17-10-2018 FORC55_1716 715972071ec6516a5936b96f539374de 100 Gene3D G3DSA:1.10.10.10 1 100 7.4E-38 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1716 715972071ec6516a5936b96f539374de 100 SUPERFAMILY SSF46767 2 84 4.32E-25 T 17-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 FORC55_1716 715972071ec6516a5936b96f539374de 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.5E-23 T 17-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 FORC55_2447 c529e39621c8b64ccd8846f77cb5654f 295 SUPERFAMILY SSF103481 214 294 2.22E-9 T 17-10-2018 FORC55_2447 c529e39621c8b64ccd8846f77cb5654f 295 SUPERFAMILY SSF103481 36 140 1.16E-11 T 17-10-2018 FORC55_2447 c529e39621c8b64ccd8846f77cb5654f 295 Pfam PF00892 EamA-like transporter family 157 294 2.6E-15 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_2447 c529e39621c8b64ccd8846f77cb5654f 295 Pfam PF00892 EamA-like transporter family 4 135 2.1E-15 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_2503 91678917580df5b7e2c78cdb8af87483 132 SUPERFAMILY SSF46955 2 121 5.49E-35 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily FORC55_2503 91678917580df5b7e2c78cdb8af87483 132 Gene3D G3DSA:1.10.1660.10 1 130 4.1E-37 T 17-10-2018 FORC55_2503 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.2E-11 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2503 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.2E-11 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2503 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.2E-11 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2503 91678917580df5b7e2c78cdb8af87483 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 4.9E-18 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_2503 91678917580df5b7e2c78cdb8af87483 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.0E-63 T 17-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 FORC55_2503 91678917580df5b7e2c78cdb8af87483 132 SMART SM00422 2 71 4.7E-31 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 SUPERFAMILY SSF52964 29 181 1.31E-40 T 17-10-2018 FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 Gene3D G3DSA:2.120.10.30 185 450 1.0E-99 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 Gene3D G3DSA:3.40.50.10070 23 183 2.7E-49 T 17-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 5.4E-8 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 Pfam PF07676 WD40-like Beta Propeller Repeat 301 336 5.4E-14 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 8.5E-9 T 17-10-2018 IPR011659 WD40-like Beta Propeller FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 2 446 51.505 T 17-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 2.1E-173 T 17-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 Pfam PF04052 TolB amino-terminal domain 24 126 3.4E-34 T 17-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 FORC55_1000 f21498b2bc83484ba9f76b4f9bd2ee45 450 SUPERFAMILY SSF69304 176 448 6.8E-59 T 17-10-2018 FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 SUPERFAMILY SSF55031 179 289 3.79E-22 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 Gene3D G3DSA:3.40.630.10 16 362 2.0E-114 T 17-10-2018 FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 SUPERFAMILY SSF53187 7 365 2.07E-59 T 17-10-2018 FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 Pfam PF07687 Peptidase dimerisation domain 185 273 9.4E-13 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 Gene3D G3DSA:3.30.70.360 176 287 2.0E-114 T 17-10-2018 FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 PIRSF PIRSF001123 6 105 0.15 T 17-10-2018 IPR008007 Peptidase M42 FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 PIRSF PIRSF001123 231 368 0.0056 T 17-10-2018 IPR008007 Peptidase M42 FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 PIRSF PIRSF001123 98 181 3.5E-5 T 17-10-2018 IPR008007 Peptidase M42 FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 Pfam PF01546 Peptidase family M20/M25/M40 72 365 1.7E-20 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 FORC55_1453 e0b14178f02ef3d78ee3280b2161465f 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 367 1.1E-187 T 17-10-2018 IPR010162 Peptidase M20B, peptidase T-like FORC55_2235 ed0b5cff2f1dfa896b2c47315cf2775c 288 Gene3D G3DSA:3.40.1010.10 2 120 2.3E-46 T 17-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 FORC55_2235 ed0b5cff2f1dfa896b2c47315cf2775c 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 6.4E-102 T 17-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 FORC55_2235 ed0b5cff2f1dfa896b2c47315cf2775c 288 SUPERFAMILY SSF53790 12 232 1.1E-85 T 17-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 FORC55_2235 ed0b5cff2f1dfa896b2c47315cf2775c 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 17-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 FORC55_2235 ed0b5cff2f1dfa896b2c47315cf2775c 288 PIRSF PIRSF005917 1 288 5.1E-109 T 17-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 FORC55_2235 ed0b5cff2f1dfa896b2c47315cf2775c 288 Gene3D G3DSA:3.30.950.10 121 241 3.4E-44 T 17-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 FORC55_2235 ed0b5cff2f1dfa896b2c47315cf2775c 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.346 T 17-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 FORC55_2235 ed0b5cff2f1dfa896b2c47315cf2775c 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 8.7E-28 T 17-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 FORC55_2401 e78332087e711d27020dfc29e2f085be 252 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 24 245 4.6E-92 T 17-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 FORC55_2401 e78332087e711d27020dfc29e2f085be 252 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 12 246 40.349 T 17-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 FORC55_2401 e78332087e711d27020dfc29e2f085be 252 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 36 246 3.5E-87 T 17-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 FORC55_2401 e78332087e711d27020dfc29e2f085be 252 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 51 222 3.8E-51 T 17-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 FORC55_2401 e78332087e711d27020dfc29e2f085be 252 Gene3D G3DSA:3.40.50.620 7 219 1.0E-65 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2401 e78332087e711d27020dfc29e2f085be 252 SUPERFAMILY SSF52402 24 211 2.26E-57 T 17-10-2018 FORC55_2401 e78332087e711d27020dfc29e2f085be 252 PIRSF PIRSF000857 5 251 3.4E-58 T 17-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 FORC55_2036 840eb94a9936cbb67cfdc70714890df2 174 Gene3D G3DSA:3.90.950.10 1 174 1.4E-77 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like FORC55_2036 840eb94a9936cbb67cfdc70714890df2 174 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 31.616 T 17-10-2018 IPR002786 Non-canonical purine NTP phosphatase FORC55_2036 840eb94a9936cbb67cfdc70714890df2 174 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 171 1.1E-47 T 17-10-2018 IPR002786 Non-canonical purine NTP phosphatase FORC55_2036 840eb94a9936cbb67cfdc70714890df2 174 SUPERFAMILY SSF52972 1 171 4.8E-63 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like FORC55_2036 840eb94a9936cbb67cfdc70714890df2 174 Pfam PF01931 Protein of unknown function DUF84 7 166 4.4E-59 T 17-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 PIRSF PIRSF000456 4 262 1.2E-108 T 17-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 SUPERFAMILY SSF51161 1 262 5.0E-83 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 Gene3D G3DSA:2.160.10.10 1 196 6.7E-54 T 17-10-2018 FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.521 T 17-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.1E-31 T 17-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 3.7E-110 T 17-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 32 1.3E-6 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.6E-8 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0613 85d179254256a99ab1f8ec237b76504d 262 Gene3D G3DSA:1.20.1180.10 197 262 1.2E-27 T 17-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 FORC55_1224 8bb24b2ebae952b13e9a79e9f3671594 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-141 T 17-10-2018 FORC55_1224 8bb24b2ebae952b13e9a79e9f3671594 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.369 T 17-10-2018 IPR033752 MetA family FORC55_1224 8bb24b2ebae952b13e9a79e9f3671594 313 SUPERFAMILY SSF52317 17 297 8.18E-104 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1224 8bb24b2ebae952b13e9a79e9f3671594 313 Gene3D G3DSA:3.40.50.880 1 301 2.8E-126 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1224 8bb24b2ebae952b13e9a79e9f3671594 313 PIRSF PIRSF000450 1 309 1.9E-150 T 17-10-2018 IPR033752 MetA family FORC55_1224 8bb24b2ebae952b13e9a79e9f3671594 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.6E-171 T 17-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 FORC55_1224 8bb24b2ebae952b13e9a79e9f3671594 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.1E-136 T 17-10-2018 IPR033752 MetA family FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 488 536 7.7E-27 T 17-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 SMART SM00091 104 170 2.9E-5 T 17-10-2018 IPR000014 PAS domain FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 Gene3D G3DSA:3.40.50.300 220 399 1.5E-58 T 17-10-2018 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 Gene3D G3DSA:3.30.70.260 25 104 3.6E-25 T 17-10-2018 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 Pfam PF00989 PAS fold 108 154 5.8E-5 T 17-10-2018 IPR013767 PAS fold GO:0006355 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 Gene3D G3DSA:1.10.8.60 400 477 1.6E-16 T 17-10-2018 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 SUPERFAMILY SSF55785 107 185 2.79E-8 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 Pfam PF00158 Sigma-54 interaction domain 230 394 9.0E-58 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 SUPERFAMILY SSF46689 481 535 2.93E-8 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 Gene3D G3DSA:1.10.10.60 482 536 1.4E-24 T 17-10-2018 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 SUPERFAMILY SSF52540 229 467 1.39E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 314 329 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 253 266 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 Gene3D G3DSA:3.30.450.20 106 210 1.0E-21 T 17-10-2018 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 SMART SM00382 249 392 4.3E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 SUPERFAMILY SSF55021 24 92 5.6E-7 T 17-10-2018 FORC55_1486 6ca71d06b293636d2f2a5e3b72744115 537 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 441 450 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 Gene3D G3DSA:3.40.47.10 5 434 6.1E-109 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 2.5E-35 T 17-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.889 T 17-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 1.7E-61 T 17-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 2.9E-262 T 17-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 PIRSF PIRSF000429 8 435 4.0E-116 T 17-10-2018 IPR002155 Thiolase GO:0016747 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 SUPERFAMILY SSF53901 296 434 1.6E-31 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 17-10-2018 IPR020613 Thiolase, conserved site GO:0016747 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 SUPERFAMILY SSF53901 14 294 7.09E-59 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_1735 e04c7e494027452bdb94f6b8fbbcd035 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 1.1E-125 T 17-10-2018 IPR002155 Thiolase GO:0016747 FORC55_0272 8e6aaeaf32711ebdfd955dd5aab16fa2 69 Gene3D G3DSA:1.10.10.610 1 67 2.0E-29 T 17-10-2018 IPR036685 YehU-like superfamily FORC55_0272 8e6aaeaf32711ebdfd955dd5aab16fa2 69 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 65 4.4E-34 T 17-10-2018 IPR010648 Uncharacterised protein family UPF0270 FORC55_0272 8e6aaeaf32711ebdfd955dd5aab16fa2 69 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 55 6.0E-25 T 17-10-2018 IPR010648 Uncharacterised protein family UPF0270 FORC55_0272 8e6aaeaf32711ebdfd955dd5aab16fa2 69 PIRSF PIRSF006169 1 68 9.2E-35 T 17-10-2018 IPR010648 Uncharacterised protein family UPF0270 FORC55_0272 8e6aaeaf32711ebdfd955dd5aab16fa2 69 SUPERFAMILY SSF118001 1 65 3.14E-28 T 17-10-2018 IPR036685 YehU-like superfamily FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 PIRSF PIRSF004491 1 313 5.8E-108 T 17-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 SUPERFAMILY SSF52374 16 179 1.48E-33 T 17-10-2018 FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 Pfam PF01687 Riboflavin kinase 184 306 4.8E-38 T 17-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 Gene3D G3DSA:3.40.50.620 1 185 4.5E-62 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.0E-105 T 17-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 Gene3D G3DSA:2.40.30.30 186 320 7.0E-39 T 17-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 SUPERFAMILY SSF82114 175 310 3.27E-44 T 17-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 Pfam PF06574 FAD synthetase 11 167 8.1E-60 T 17-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 FORC55_2055 bf079b3c1f983dc0161863c8ec58f426 322 SMART SM00904 183 307 1.2E-65 T 17-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 FORC55_1849 2e7d9c044e812905a61253be914429f9 143 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 91 119 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 FORC55_1849 2e7d9c044e812905a61253be914429f9 143 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 83 115 9.9E-8 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_1849 2e7d9c044e812905a61253be914429f9 143 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 53 74 2.1E-4 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_1849 2e7d9c044e812905a61253be914429f9 143 PIRSF PIRSF000441 1 142 1.9E-40 T 17-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 FORC55_1849 2e7d9c044e812905a61253be914429f9 143 SUPERFAMILY SSF51161 2 137 1.25E-32 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_1849 2e7d9c044e812905a61253be914429f9 143 Gene3D G3DSA:2.160.10.10 33 141 9.2E-31 T 17-10-2018 FORC55_1605 85b8cd4ece2c27a3ba99488bbd0c7edf 573 Pfam PF00005 ABC transporter 357 502 2.2E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1605 85b8cd4ece2c27a3ba99488bbd0c7edf 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 8.7E-137 T 17-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 FORC55_1605 85b8cd4ece2c27a3ba99488bbd0c7edf 573 Gene3D G3DSA:3.40.50.300 326 573 1.3E-75 T 17-10-2018 FORC55_1605 85b8cd4ece2c27a3ba99488bbd0c7edf 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1605 85b8cd4ece2c27a3ba99488bbd0c7edf 573 SMART SM00382 365 555 5.0E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1605 85b8cd4ece2c27a3ba99488bbd0c7edf 573 Gene3D G3DSA:1.20.1560.10 1 320 3.9E-25 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1605 85b8cd4ece2c27a3ba99488bbd0c7edf 573 SUPERFAMILY SSF90123 7 322 8.63E-37 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1605 85b8cd4ece2c27a3ba99488bbd0c7edf 573 SUPERFAMILY SSF52540 333 571 7.76E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 SUPERFAMILY SSF46689 178 226 3.0E-8 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 Pfam PF12833 Helix-turn-helix domain 198 275 4.3E-21 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 Gene3D G3DSA:1.10.10.60 235 276 9.7E-13 T 17-10-2018 FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 270 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 Gene3D G3DSA:1.10.10.60 180 234 2.6E-15 T 17-10-2018 FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 Pfam PF02311 AraC-like ligand binding domain 21 152 7.4E-29 T 17-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 SUPERFAMILY SSF51215 34 157 1.44E-17 T 17-10-2018 IPR037923 Transcription regulator HTH-like FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 SUPERFAMILY SSF46689 229 275 6.72E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3583 00b122e55d93a10aaf85fdc59fc661b7 276 SMART SM00342 192 274 1.0E-29 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_1717 e5f953cec0ac237dd85af075e94813ea 143 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 132 3.7E-41 T 17-10-2018 IPR039366 YscW/ExsB FORC55_2486 2d960e77f2d783dadf8244e4fe6b755a 287 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 285 4.8E-117 T 17-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 FORC55_2486 2d960e77f2d783dadf8244e4fe6b755a 287 PIRSF PIRSF006621 1 286 7.3E-88 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_2486 2d960e77f2d783dadf8244e4fe6b755a 287 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 59 77 - T 17-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_2486 2d960e77f2d783dadf8244e4fe6b755a 287 SUPERFAMILY SSF51395 2 284 1.06E-76 T 17-10-2018 FORC55_2486 2d960e77f2d783dadf8244e4fe6b755a 287 Gene3D G3DSA:1.10.1200.80 217 287 3.0E-8 T 17-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 FORC55_2486 2d960e77f2d783dadf8244e4fe6b755a 287 Gene3D G3DSA:3.20.20.70 1 205 2.5E-65 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2486 2d960e77f2d783dadf8244e4fe6b755a 287 Pfam PF01207 Dihydrouridine synthase (Dus) 1 279 4.8E-100 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 Gene3D G3DSA:3.40.50.20 1 85 1.5E-34 T 17-10-2018 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 Gene3D G3DSA:3.30.470.20 86 433 5.5E-157 T 17-10-2018 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 5.3E-244 T 17-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 Gene3D G3DSA:3.30.1490.20 131 203 5.5E-157 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.5E-44 T 17-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.5E-38 T 17-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 SUPERFAMILY SSF52440 1 113 3.81E-46 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 SUPERFAMILY SSF51246 331 444 6.28E-43 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 6.3E-86 T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 SUPERFAMILY SSF56059 83 346 1.41E-69 T 17-10-2018 FORC55_2484 ea0c6d989d19966c0b8ed7e0cd740da0 447 SMART SM00878 336 441 6.8E-66 T 17-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 FORC55_1174 b57b7e9eaa57b00896abc423b5ed45ee 566 Gene3D G3DSA:1.10.3720.10 297 547 1.2E-21 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1174 b57b7e9eaa57b00896abc423b5ed45ee 566 Gene3D G3DSA:1.10.3720.10 3 281 1.7E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1174 b57b7e9eaa57b00896abc423b5ed45ee 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 367 535 1.1E-9 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1174 b57b7e9eaa57b00896abc423b5ed45ee 566 SUPERFAMILY SSF161098 301 538 3.4E-26 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1174 b57b7e9eaa57b00896abc423b5ed45ee 566 SUPERFAMILY SSF161098 5 271 2.75E-22 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2204 e7441acd99bad2dbb48e0c43a249bb15 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2204 e7441acd99bad2dbb48e0c43a249bb15 327 Pfam PF00005 ABC transporter 26 181 2.2E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2204 e7441acd99bad2dbb48e0c43a249bb15 327 Gene3D G3DSA:3.40.50.300 3 326 8.0E-91 T 17-10-2018 FORC55_2204 e7441acd99bad2dbb48e0c43a249bb15 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.4E-17 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_2204 e7441acd99bad2dbb48e0c43a249bb15 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.8E-22 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_2204 e7441acd99bad2dbb48e0c43a249bb15 327 SUPERFAMILY SSF52540 5 252 2.08E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2204 e7441acd99bad2dbb48e0c43a249bb15 327 SMART SM00382 34 231 1.3E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2051 8d5b71c845167a8c77d244bcc10f514b 316 Gene3D G3DSA:3.40.50.11270 12 96 2.1E-107 T 17-10-2018 FORC55_2051 8d5b71c845167a8c77d244bcc10f514b 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 1.2E-96 T 17-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 FORC55_2051 8d5b71c845167a8c77d244bcc10f514b 316 Pfam PF02401 LytB protein 3 284 7.3E-92 T 17-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 FORC55_2051 8d5b71c845167a8c77d244bcc10f514b 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.967 T 17-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 FORC55_2051 8d5b71c845167a8c77d244bcc10f514b 316 Gene3D G3DSA:3.40.1010.20 6 283 2.1E-107 T 17-10-2018 FORC55_2051 8d5b71c845167a8c77d244bcc10f514b 316 Gene3D G3DSA:3.40.1010.20 97 198 2.1E-107 T 17-10-2018 FORC55_0167 13b62274b12dda5e773d622ca58c8385 253 Gene3D G3DSA:3.40.50.1820 1 252 7.2E-67 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0167 13b62274b12dda5e773d622ca58c8385 253 SUPERFAMILY SSF53474 3 250 2.63E-49 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0167 13b62274b12dda5e773d622ca58c8385 253 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 9 251 2.7E-120 T 17-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 FORC55_0167 13b62274b12dda5e773d622ca58c8385 253 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 252 45.323 T 17-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 FORC55_0167 13b62274b12dda5e773d622ca58c8385 253 Pfam PF00561 alpha/beta hydrolase fold 14 239 2.1E-21 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_1890 ec9fb289d9b0a27314ca320fd14c4d87 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.38 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1890 ec9fb289d9b0a27314ca320fd14c4d87 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.8E-8 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1890 ec9fb289d9b0a27314ca320fd14c4d87 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1890 ec9fb289d9b0a27314ca320fd14c4d87 41 SUPERFAMILY SSF57840 1 40 1.44E-13 T 17-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1890 ec9fb289d9b0a27314ca320fd14c4d87 41 Pfam PF00444 Ribosomal protein L36 1 40 6.8E-17 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1136 93a8599b9901c19d9de98b1c0020898f 98 SUPERFAMILY SSF54909 1 98 4.56E-32 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel FORC55_1136 93a8599b9901c19d9de98b1c0020898f 98 Gene3D G3DSA:3.30.70.1060 1 98 1.3E-38 T 17-10-2018 FORC55_1136 93a8599b9901c19d9de98b1c0020898f 98 Pfam PF03795 YCII-related domain 1 95 4.6E-31 T 17-10-2018 IPR005545 YCII-related FORC55_1879 e80975dbb6ca9cacd98b6f5fb95fffe4 294 SUPERFAMILY SSF48576 3 288 6.24E-86 T 17-10-2018 IPR008949 Isoprenoid synthase domain superfamily FORC55_1879 e80975dbb6ca9cacd98b6f5fb95fffe4 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 17-10-2018 IPR033749 Polyprenyl synthetase, conserved site FORC55_1879 e80975dbb6ca9cacd98b6f5fb95fffe4 294 Gene3D G3DSA:1.10.600.10 1 294 1.2E-119 T 17-10-2018 IPR008949 Isoprenoid synthase domain superfamily FORC55_1879 e80975dbb6ca9cacd98b6f5fb95fffe4 294 Pfam PF00348 Polyprenyl synthetase 31 268 8.9E-57 T 17-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 FORC55_1879 e80975dbb6ca9cacd98b6f5fb95fffe4 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 17-10-2018 IPR033749 Polyprenyl synthetase, conserved site FORC55_1682 0610c476c2b51cb47d490281a366f2ae 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 7.0E-123 T 17-10-2018 IPR007487 ABC transporter, substrate-binding protein FORC55_1682 0610c476c2b51cb47d490281a366f2ae 321 Gene3D G3DSA:3.40.50.2300 46 292 1.1E-107 T 17-10-2018 FORC55_1682 0610c476c2b51cb47d490281a366f2ae 321 Gene3D G3DSA:3.40.50.2300 143 315 1.1E-107 T 17-10-2018 FORC55_1682 0610c476c2b51cb47d490281a366f2ae 321 SUPERFAMILY SSF53822 43 275 5.55E-19 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_0454 7bbd5158abbec4d46631bcbeb658931f 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 167 5.7E-28 T 17-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 FORC55_0454 7bbd5158abbec4d46631bcbeb658931f 181 Gene3D G3DSA:3.40.80.10 2 181 7.7E-56 T 17-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 FORC55_0454 7bbd5158abbec4d46631bcbeb658931f 181 SMART SM00644 16 167 2.9E-60 T 17-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 FORC55_0454 7bbd5158abbec4d46631bcbeb658931f 181 SUPERFAMILY SSF55846 2 179 1.31E-65 T 17-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 FORC55_0952 6698129b30e24232e9d3a32c199d8bbd 228 SMART SM00382 33 221 2.5E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0952 6698129b30e24232e9d3a32c199d8bbd 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.0E-109 T 17-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 FORC55_0952 6698129b30e24232e9d3a32c199d8bbd 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0952 6698129b30e24232e9d3a32c199d8bbd 228 Gene3D G3DSA:3.40.50.300 1 227 2.3E-65 T 17-10-2018 FORC55_0952 6698129b30e24232e9d3a32c199d8bbd 228 SUPERFAMILY SSF52540 4 225 3.25E-69 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0952 6698129b30e24232e9d3a32c199d8bbd 228 Pfam PF00005 ABC transporter 24 172 5.9E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1284 d4c4c43f7c3d7fabe6abfa8bb74c1a98 392 Gene3D G3DSA:1.25.40.10 270 368 8.8E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1284 d4c4c43f7c3d7fabe6abfa8bb74c1a98 392 Gene3D G3DSA:1.25.40.10 31 267 2.3E-13 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1284 d4c4c43f7c3d7fabe6abfa8bb74c1a98 392 SUPERFAMILY SSF48452 32 232 1.19E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1284 d4c4c43f7c3d7fabe6abfa8bb74c1a98 392 SUPERFAMILY SSF48452 263 389 7.79E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2280 93f18d321e4b1780d7377aea4defd2e7 311 SUPERFAMILY SSF54106 46 91 9.02E-10 T 17-10-2018 FORC55_2280 93f18d321e4b1780d7377aea4defd2e7 311 SMART SM00257 47 91 1.0E-10 T 17-10-2018 IPR018392 LysM domain FORC55_2280 93f18d321e4b1780d7377aea4defd2e7 311 Pfam PF01551 Peptidase family M23 212 306 1.3E-30 T 17-10-2018 IPR016047 Peptidase M23 FORC55_2280 93f18d321e4b1780d7377aea4defd2e7 311 Gene3D G3DSA:2.70.70.10 175 310 1.0E-36 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_2280 93f18d321e4b1780d7377aea4defd2e7 311 SUPERFAMILY SSF51261 182 310 3.5E-48 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_2280 93f18d321e4b1780d7377aea4defd2e7 311 Pfam PF01476 LysM domain 48 90 1.5E-11 T 17-10-2018 IPR018392 LysM domain FORC55_2280 93f18d321e4b1780d7377aea4defd2e7 311 Gene3D G3DSA:3.10.350.10 37 98 1.0E-10 T 17-10-2018 IPR036779 LysM domain superfamily FORC55_1243 1f5f0e84f0d70e4dac699f5c51898379 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 244 387 1.5E-35 T 17-10-2018 IPR000160 GGDEF domain FORC55_1243 1f5f0e84f0d70e4dac699f5c51898379 406 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 390 9.1E-37 T 17-10-2018 IPR000160 GGDEF domain FORC55_1243 1f5f0e84f0d70e4dac699f5c51898379 406 SUPERFAMILY SSF55073 248 390 4.79E-38 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1243 1f5f0e84f0d70e4dac699f5c51898379 406 Gene3D G3DSA:3.30.70.270 238 397 1.4E-42 T 17-10-2018 FORC55_1243 1f5f0e84f0d70e4dac699f5c51898379 406 SMART SM00267 234 391 6.5E-39 T 17-10-2018 IPR000160 GGDEF domain FORC55_0627 50928c322e2d6b954ffefae3857533d2 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 6.0E-107 T 17-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0627 50928c322e2d6b954ffefae3857533d2 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 230 1.5E-82 T 17-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_0627 50928c322e2d6b954ffefae3857533d2 247 Gene3D G3DSA:3.30.420.10 4 196 7.5E-60 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_0627 50928c322e2d6b954ffefae3857533d2 247 Pfam PF00929 Exonuclease 13 180 4.7E-40 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_0627 50928c322e2d6b954ffefae3857533d2 247 SUPERFAMILY SSF53098 10 190 1.8E-55 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_0627 50928c322e2d6b954ffefae3857533d2 247 SMART SM00479 11 189 4.3E-52 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_2145 b00f5aea875d9e08d8a59ac56ed62da7 230 Pfam PF13098 Thioredoxin-like domain 106 214 9.0E-15 T 17-10-2018 IPR012336 Thioredoxin-like fold FORC55_2145 b00f5aea875d9e08d8a59ac56ed62da7 230 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 72 2.1E-8 T 17-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal FORC55_2145 b00f5aea875d9e08d8a59ac56ed62da7 230 SUPERFAMILY SSF52833 63 219 1.87E-20 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_2145 b00f5aea875d9e08d8a59ac56ed62da7 230 SUPERFAMILY SSF54423 30 74 1.96E-8 T 17-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 FORC55_2145 b00f5aea875d9e08d8a59ac56ed62da7 230 Gene3D G3DSA:3.10.450.70 29 76 2.4E-7 T 17-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 FORC55_2145 b00f5aea875d9e08d8a59ac56ed62da7 230 Gene3D G3DSA:3.40.30.10 101 229 3.2E-33 T 17-10-2018 FORC55_3514 8ccc553428d3aaf03de8dcb6e2117f4f 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 85 101 1.6E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 FORC55_3514 8ccc553428d3aaf03de8dcb6e2117f4f 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 70 85 1.6E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 FORC55_3514 8ccc553428d3aaf03de8dcb6e2117f4f 107 Pfam PF12833 Helix-turn-helix domain 24 103 1.7E-19 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3514 8ccc553428d3aaf03de8dcb6e2117f4f 107 SMART SM00342 18 101 6.1E-14 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3514 8ccc553428d3aaf03de8dcb6e2117f4f 107 SUPERFAMILY SSF46689 54 105 5.38E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3514 8ccc553428d3aaf03de8dcb6e2117f4f 107 Gene3D G3DSA:1.10.10.60 4 107 1.0E-25 T 17-10-2018 FORC55_3486 789ed0d1574ac2edf083da6b8d62c7d5 248 SUPERFAMILY SSF89550 5 243 4.58E-59 T 17-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 FORC55_3486 789ed0d1574ac2edf083da6b8d62c7d5 248 Gene3D G3DSA:3.20.20.140 3 247 5.1E-61 T 17-10-2018 FORC55_3486 789ed0d1574ac2edf083da6b8d62c7d5 248 SMART SM00481 5 79 2.4E-8 T 17-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal FORC55_3486 789ed0d1574ac2edf083da6b8d62c7d5 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.405 T 17-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 FORC55_1709 74196d1ef75da323a5afdd9874dc76f8 600 SUPERFAMILY SSF51445 361 600 3.9E-58 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_1709 74196d1ef75da323a5afdd9874dc76f8 600 Pfam PF00704 Glycosyl hydrolases family 18 369 599 4.1E-52 T 17-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 FORC55_1709 74196d1ef75da323a5afdd9874dc76f8 600 SMART SM00636 368 600 2.3E-25 T 17-10-2018 IPR011583 Chitinase II GO:0008061 FORC55_1709 74196d1ef75da323a5afdd9874dc76f8 600 ProSitePatterns PS01095 Chitinases family 18 active site. 504 512 - T 17-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 FORC55_1709 74196d1ef75da323a5afdd9874dc76f8 600 Gene3D G3DSA:3.20.20.80 361 600 1.9E-68 T 17-10-2018 FORC55_1709 74196d1ef75da323a5afdd9874dc76f8 600 Gene3D G3DSA:2.60.40.10 252 343 2.6E-23 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1709 74196d1ef75da323a5afdd9874dc76f8 600 Gene3D G3DSA:2.60.40.10 150 240 6.8E-17 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_3427 7fba4735b5fe736d99dceb6c2764ecc7 278 Gene3D G3DSA:3.40.190.10 101 235 1.6E-86 T 17-10-2018 FORC55_3427 7fba4735b5fe736d99dceb6c2764ecc7 278 Gene3D G3DSA:3.40.190.10 30 272 1.6E-86 T 17-10-2018 FORC55_3427 7fba4735b5fe736d99dceb6c2764ecc7 278 Pfam PF12727 PBP superfamily domain 44 258 3.5E-39 T 17-10-2018 IPR024370 PBP domain FORC55_3427 7fba4735b5fe736d99dceb6c2764ecc7 278 SUPERFAMILY SSF53850 27 272 7.56E-64 T 17-10-2018 FORC55_3427 7fba4735b5fe736d99dceb6c2764ecc7 278 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 17 272 3.6E-66 T 17-10-2018 IPR011862 Phosphate binding protein GO:0042301 FORC55_0180 7ee370be8e32610cdaee186946156228 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 3.0E-236 T 17-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 FORC55_0180 7ee370be8e32610cdaee186946156228 692 Pfam PF00270 DEAD/DEAH box helicase 271 432 1.4E-18 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_0180 7ee370be8e32610cdaee186946156228 692 SUPERFAMILY SSF52540 215 452 9.41E-57 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0180 7ee370be8e32610cdaee186946156228 692 SMART SM00490 504 588 3.6E-23 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0180 7ee370be8e32610cdaee186946156228 692 SMART SM00487 264 458 1.7E-30 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_0180 7ee370be8e32610cdaee186946156228 692 Gene3D G3DSA:2.40.50.140 46 137 1.5E-12 T 17-10-2018 FORC55_0180 7ee370be8e32610cdaee186946156228 692 SUPERFAMILY SSF50249 8 173 3.08E-40 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0180 7ee370be8e32610cdaee186946156228 692 Pfam PF00271 Helicase conserved C-terminal domain 479 587 7.1E-18 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0180 7ee370be8e32610cdaee186946156228 692 Gene3D G3DSA:3.40.50.300 456 629 1.0E-53 T 17-10-2018 FORC55_0180 7ee370be8e32610cdaee186946156228 692 Gene3D G3DSA:1.10.150.20 1 40 1.7E-5 T 17-10-2018 FORC55_0180 7ee370be8e32610cdaee186946156228 692 Gene3D G3DSA:3.40.50.300 209 449 1.0E-82 T 17-10-2018 FORC55_0180 7ee370be8e32610cdaee186946156228 692 Pfam PF17191 RecG wedge domain 14 170 1.9E-20 T 17-10-2018 IPR033454 RecG, wedge domain FORC55_0180 7ee370be8e32610cdaee186946156228 692 SUPERFAMILY SSF52540 451 653 1.93E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 2.7E-47 T 17-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 Pfam PF00571 CBS domain 153 211 2.7E-8 T 17-10-2018 IPR000644 CBS domain FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 Pfam PF00571 CBS domain 225 277 4.2E-11 T 17-10-2018 IPR000644 CBS domain FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 SUPERFAMILY SSF51206 8 133 1.57E-27 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 SMART SM00116 159 215 0.0036 T 17-10-2018 IPR000644 CBS domain FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 SMART SM00116 232 279 1.6E-4 T 17-10-2018 IPR000644 CBS domain FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 Gene3D G3DSA:3.10.580.10 145 281 2.1E-33 T 17-10-2018 FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 Gene3D G3DSA:2.60.120.10 1 144 3.6E-23 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.4E-12 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 1.6E-43 T 17-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 SUPERFAMILY SSF54631 145 278 5.56E-29 T 17-10-2018 FORC55_2123 e4133be33a1da406e0b2e3c7eaff4841 626 SMART SM00100 17 134 3.1E-10 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain FORC55_1718 10b176588f34e2855f18ee616bc61c26 286 Pfam PF13622 Thioesterase-like superfamily 33 282 2.3E-61 T 17-10-2018 FORC55_1718 10b176588f34e2855f18ee616bc61c26 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.1E-94 T 17-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 FORC55_1718 10b176588f34e2855f18ee616bc61c26 286 Gene3D G3DSA:3.10.129.90 2 285 5.7E-108 T 17-10-2018 FORC55_1718 10b176588f34e2855f18ee616bc61c26 286 SUPERFAMILY SSF54637 116 283 1.96E-59 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_1718 10b176588f34e2855f18ee616bc61c26 286 SUPERFAMILY SSF54637 5 114 8.43E-40 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 SUPERFAMILY SSF53067 19 196 1.79E-49 T 17-10-2018 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 Gene3D G3DSA:2.60.34.10 378 518 6.2E-50 T 17-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 Pfam PF00012 Hsp70 protein 22 600 9.7E-193 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.76 T 17-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 SUPERFAMILY SSF100920 384 536 4.45E-52 T 17-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 3.2E-266 T 17-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 SUPERFAMILY SSF53067 200 376 4.25E-50 T 17-10-2018 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 Gene3D G3DSA:1.20.1270.10 519 615 2.8E-28 T 17-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 Gene3D G3DSA:3.90.640.10 238 310 3.6E-111 T 17-10-2018 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 Gene3D G3DSA:3.30.420.40 23 373 3.6E-111 T 17-10-2018 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 Gene3D G3DSA:3.30.420.40 194 360 3.6E-111 T 17-10-2018 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 SUPERFAMILY SSF100934 503 615 1.06E-35 T 17-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 328 344 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 465 481 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 384 403 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 PRINTS PR00301 70kDa heat shock protein signature 359 379 1.1E-56 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1991 567996e5a0843e4e6b8c3a2594f0238c 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 FORC55_1002 c1fee696c9e9f20d1db92c07b26c0651 254 Pfam PF13432 Tetratricopeptide repeat 148 200 1.1E-7 T 17-10-2018 FORC55_1002 c1fee696c9e9f20d1db92c07b26c0651 254 Pfam PF13174 Tetratricopeptide repeat 211 243 2.0E-6 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1002 c1fee696c9e9f20d1db92c07b26c0651 254 Gene3D G3DSA:1.25.40.10 136 254 3.0E-23 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1002 c1fee696c9e9f20d1db92c07b26c0651 254 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 254 16.802 T 17-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 FORC55_1002 c1fee696c9e9f20d1db92c07b26c0651 254 SUPERFAMILY SSF48452 138 250 8.22E-13 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1002 c1fee696c9e9f20d1db92c07b26c0651 254 Gene3D G3DSA:1.20.5.110 37 115 1.2E-21 T 17-10-2018 FORC55_1002 c1fee696c9e9f20d1db92c07b26c0651 254 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 137 253 2.6E-35 T 17-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal FORC55_1002 c1fee696c9e9f20d1db92c07b26c0651 254 Pfam PF16331 TolA binding protein trimerisation 42 113 3.3E-23 T 17-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 FORC55_2193 48a3227e0c457bf92e64f3b511b1498f 433 Gene3D G3DSA:2.70.70.10 269 398 8.3E-79 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_2193 48a3227e0c457bf92e64f3b511b1498f 433 SUPERFAMILY SSF51261 147 393 4.66E-70 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_2193 48a3227e0c457bf92e64f3b511b1498f 433 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 9.3E-8 T 17-10-2018 IPR013731 Opacity-associated protein A, N-terminal FORC55_2193 48a3227e0c457bf92e64f3b511b1498f 433 Pfam PF01551 Peptidase family M23 298 392 4.7E-30 T 17-10-2018 IPR016047 Peptidase M23 FORC55_2193 48a3227e0c457bf92e64f3b511b1498f 433 Gene3D G3DSA:3.10.450.350 70 163 1.2E-10 T 17-10-2018 FORC55_2193 48a3227e0c457bf92e64f3b511b1498f 433 Gene3D G3DSA:3.10.450.350 176 411 8.3E-79 T 17-10-2018 FORC55_2334 ca63de8821a79e7b65b3edcd4a339ea6 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 2.1E-131 T 17-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 FORC55_2334 ca63de8821a79e7b65b3edcd4a339ea6 306 Pfam PF04960 Glutaminase 22 306 6.9E-113 T 17-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 FORC55_2334 ca63de8821a79e7b65b3edcd4a339ea6 306 SUPERFAMILY SSF56601 4 306 8.62E-115 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_2334 ca63de8821a79e7b65b3edcd4a339ea6 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.405 T 17-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 FORC55_2334 ca63de8821a79e7b65b3edcd4a339ea6 306 Gene3D G3DSA:3.40.710.10 1 306 7.9E-112 T 17-10-2018 FORC55_3668 0209d57420a84de1b4f661d7b58d6f33 153 Gene3D G3DSA:2.30.30.40 8 133 7.8E-35 T 17-10-2018 FORC55_3668 0209d57420a84de1b4f661d7b58d6f33 153 SUPERFAMILY SSF50341 5 140 7.06E-33 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 FORC55_3668 0209d57420a84de1b4f661d7b58d6f33 153 Gene3D G3DSA:2.40.50.180 24 134 7.8E-35 T 17-10-2018 FORC55_3668 0209d57420a84de1b4f661d7b58d6f33 153 SMART SM00260 1 139 6.1E-32 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_3668 0209d57420a84de1b4f661d7b58d6f33 153 Pfam PF01584 CheW-like domain 5 140 1.3E-31 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 FORC55_0679 d94724ffd202119ebc735a6748857bcf 283 SUPERFAMILY SSF51569 3 279 8.61E-105 T 17-10-2018 FORC55_0679 d94724ffd202119ebc735a6748857bcf 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.299 T 17-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 FORC55_0679 d94724ffd202119ebc735a6748857bcf 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.8E-116 T 17-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 FORC55_0679 d94724ffd202119ebc735a6748857bcf 283 Gene3D G3DSA:3.20.20.70 1 283 4.0E-102 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0679 d94724ffd202119ebc735a6748857bcf 283 Pfam PF00793 DAHP synthetase I family 10 275 1.0E-69 T 17-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 FORC55_0158 445dd3ce3b13e7356d04805fe37521fe 221 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0158 445dd3ce3b13e7356d04805fe37521fe 221 Pfam PF11612 Type II secretion system (T2SS), protein J 66 203 1.9E-39 T 17-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 FORC55_0158 445dd3ce3b13e7356d04805fe37521fe 221 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 36 2.2E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0158 445dd3ce3b13e7356d04805fe37521fe 221 SUPERFAMILY SSF54523 47 208 5.97E-55 T 17-10-2018 FORC55_0158 445dd3ce3b13e7356d04805fe37521fe 221 Gene3D G3DSA:3.10.610.10 45 158 5.8E-35 T 17-10-2018 FORC55_0158 445dd3ce3b13e7356d04805fe37521fe 221 Gene3D G3DSA:2.10.70.20 161 209 1.2E-19 T 17-10-2018 FORC55_0158 445dd3ce3b13e7356d04805fe37521fe 221 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 1.0E-7 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0158 445dd3ce3b13e7356d04805fe37521fe 221 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 14 206 3.5E-100 T 17-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 SMART SM00322 60 125 1.8E-7 T 17-10-2018 IPR004087 K Homology domain GO:0003676 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 Pfam PF07650 KH domain 38 111 1.4E-18 T 17-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 SUPERFAMILY SSF54814 2 106 1.15E-36 T 17-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.8E-99 T 17-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 Gene3D G3DSA:3.30.300.20 17 107 1.5E-28 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.055 T 17-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 Gene3D G3DSA:3.30.1140.32 108 208 3.3E-45 T 17-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.0E-42 T 17-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 17-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0294 b39826a12b2d2d5e099b65d09d7233e6 233 SUPERFAMILY SSF54821 108 206 8.76E-41 T 17-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 SUPERFAMILY SSF55816 361 603 3.79E-38 T 17-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 2.3E-12 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 Gene3D G3DSA:3.60.21.10 23 360 2.7E-136 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 554 9.7E-20 T 17-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 Gene3D G3DSA:3.90.780.10 410 592 6.5E-51 T 17-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 17-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 17-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 SUPERFAMILY SSF56300 24 360 2.11E-86 T 17-10-2018 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 PRINTS PR01607 Apyrase family signature 249 272 3.2E-30 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 PRINTS PR01607 Apyrase family signature 28 46 3.2E-30 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 PRINTS PR01607 Apyrase family signature 289 309 3.2E-30 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 PRINTS PR01607 Apyrase family signature 434 457 3.2E-30 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 PRINTS PR01607 Apyrase family signature 221 238 3.2E-30 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0322 1e51f225a9dc5c7c9b415375c296ef4e 653 PRINTS PR01607 Apyrase family signature 536 555 3.2E-30 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 SUPERFAMILY SSF46548 336 446 1.07E-21 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 SUPERFAMILY SSF142019 95 302 3.53E-61 T 17-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 Gene3D G3DSA:1.10.1060.10 364 445 7.2E-12 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 775 251.356 T 17-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 4.0E-201 T 17-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 Pfam PF12838 4Fe-4S dicluster domain 377 430 8.7E-8 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_1763 90eb021938ce52b2264008ff045911cd 854 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 8.8E-36 T 17-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain FORC55_1763 90eb021938ce52b2264008ff045911cd 854 Pfam PF10531 SLBB domain 296 345 1.5E-9 T 17-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 Gene3D G3DSA:3.40.50.11540 145 290 7.7E-14 T 17-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 5.5E-49 T 17-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_1763 90eb021938ce52b2264008ff045911cd 854 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_3636 2502319704c64d714eec75ff737611de 462 SMART SM00304 132 185 1.7E-10 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3636 2502319704c64d714eec75ff737611de 462 Gene3D G3DSA:1.10.287.950 132 462 3.7E-71 T 17-10-2018 FORC55_3636 2502319704c64d714eec75ff737611de 462 SMART SM00283 200 461 8.6E-73 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3636 2502319704c64d714eec75ff737611de 462 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 270 428 3.7E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3636 2502319704c64d714eec75ff737611de 462 SUPERFAMILY SSF58104 153 462 9.29E-74 T 17-10-2018 FORC55_3636 2502319704c64d714eec75ff737611de 462 Pfam PF00672 HAMP domain 134 182 5.5E-10 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1260 14894acd15dff0977e552544a26891eb 445 PIRSF PIRSF006446 1 444 2.5E-171 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 FORC55_1260 14894acd15dff0977e552544a26891eb 445 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 429 1.5E-155 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 FORC55_1161 f4aebbb3c4228dfcb4a69b08d3268fbd 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 1.5E-48 T 17-10-2018 IPR014320 Phage shock protein, PspC FORC55_1161 f4aebbb3c4228dfcb4a69b08d3268fbd 129 Pfam PF04024 PspC domain 4 61 5.8E-16 T 17-10-2018 IPR007168 Phage shock protein, PspC, N-terminal FORC55_1648 560b0b95c09642dfa48484960678e94e 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 203 33.919 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 FORC55_1648 560b0b95c09642dfa48484960678e94e 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 202 3.1E-68 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 FORC55_1648 560b0b95c09642dfa48484960678e94e 203 Pfam PF00117 Glutamine amidotransferase class-I 7 201 1.8E-18 T 17-10-2018 IPR017926 Glutamine amidotransferase FORC55_1648 560b0b95c09642dfa48484960678e94e 203 SUPERFAMILY SSF52317 5 202 6.59E-53 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1648 560b0b95c09642dfa48484960678e94e 203 Gene3D G3DSA:3.40.50.880 1 203 2.3E-74 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1648 560b0b95c09642dfa48484960678e94e 203 PIRSF PIRSF000495 3 203 1.3E-64 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 1.5E-5 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 269 288 1.5E-5 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 1.5E-5 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 354 362 1.5E-5 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 Pfam PF00970 Oxidoreductase FAD-binding domain 158 261 8.6E-9 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 Gene3D G3DSA:1.10.490.10 1 144 1.6E-53 T 17-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 Gene3D G3DSA:3.40.50.80 262 394 4.2E-36 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 Pfam PF00042 Globin 8 103 2.3E-13 T 17-10-2018 IPR000971 Globin GO:0020037 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 SUPERFAMILY SSF46458 1 142 4.66E-40 T 17-10-2018 IPR009050 Globin-like superfamily FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 392 52.941 T 17-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 SUPERFAMILY SSF52343 250 384 6.16E-30 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 SUPERFAMILY SSF63380 151 261 1.63E-27 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 Pfam PF00175 Oxidoreductase NAD-binding domain 270 368 4.9E-10 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 2.6E-6 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 354 362 2.6E-6 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 269 288 2.6E-6 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2862 f1fb0d77c70ad93899894baab9d923ed 394 Gene3D G3DSA:2.40.30.10 152 261 1.2E-34 T 17-10-2018 FORC55_0095 4d6798fb8bb8e38937e36065a80dfaf5 462 Gene3D G3DSA:1.10.10.920 369 462 9.3E-35 T 17-10-2018 FORC55_0095 4d6798fb8bb8e38937e36065a80dfaf5 462 SUPERFAMILY SSF102114 11 449 5.36E-144 T 17-10-2018 FORC55_0095 4d6798fb8bb8e38937e36065a80dfaf5 462 SMART SM00729 57 277 1.8E-54 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_0095 4d6798fb8bb8e38937e36065a80dfaf5 462 Pfam PF04055 Radical SAM superfamily 62 232 6.5E-19 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_0095 4d6798fb8bb8e38937e36065a80dfaf5 462 Pfam PF06969 HemN C-terminal domain 368 436 5.7E-11 T 17-10-2018 IPR010723 HemN, C-terminal FORC55_0095 4d6798fb8bb8e38937e36065a80dfaf5 462 PIRSF PIRSF000167 8 459 1.7E-171 T 17-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 FORC55_0095 4d6798fb8bb8e38937e36065a80dfaf5 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 3.9E-208 T 17-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 FORC55_0095 4d6798fb8bb8e38937e36065a80dfaf5 462 Gene3D G3DSA:3.80.30.20 7 368 1.2E-136 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe FORC55_3260 a188631fa93ab1bd1d4d8e0b239344ab 221 Pfam PF01227 GTP cyclohydrolase I 38 202 1.0E-59 T 17-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 FORC55_3260 a188631fa93ab1bd1d4d8e0b239344ab 221 Gene3D G3DSA:3.30.1130.10 85 217 1.0E-45 T 17-10-2018 FORC55_3260 a188631fa93ab1bd1d4d8e0b239344ab 221 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 202 9.3E-75 T 17-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 FORC55_3260 a188631fa93ab1bd1d4d8e0b239344ab 221 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 17-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 FORC55_3260 a188631fa93ab1bd1d4d8e0b239344ab 221 Gene3D G3DSA:1.10.286.10 1 84 8.2E-36 T 17-10-2018 FORC55_3260 a188631fa93ab1bd1d4d8e0b239344ab 221 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 218 32.153 T 17-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 FORC55_3260 a188631fa93ab1bd1d4d8e0b239344ab 221 SUPERFAMILY SSF55620 9 202 3.41E-68 T 17-10-2018 FORC55_3260 a188631fa93ab1bd1d4d8e0b239344ab 221 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 17-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 FORC55_2241 4adf52355a0c5a844cc1eff5419ae576 211 SUPERFAMILY SSF52833 11 110 5.91E-23 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_2241 4adf52355a0c5a844cc1eff5419ae576 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 194 2.5E-6 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal FORC55_2241 4adf52355a0c5a844cc1eff5419ae576 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.9E-17 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 FORC55_2241 4adf52355a0c5a844cc1eff5419ae576 211 SUPERFAMILY SSF47616 82 208 1.56E-23 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily FORC55_2241 4adf52355a0c5a844cc1eff5419ae576 211 Gene3D G3DSA:1.20.1050.10 89 193 1.4E-76 T 17-10-2018 FORC55_2241 4adf52355a0c5a844cc1eff5419ae576 211 Gene3D G3DSA:3.40.30.10 11 202 1.4E-76 T 17-10-2018 FORC55_1331 ca5e0e71be73658bac12afb901ec779f 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 17-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 FORC55_1331 ca5e0e71be73658bac12afb901ec779f 336 SUPERFAMILY SSF51395 1 336 2.13E-106 T 17-10-2018 FORC55_1331 ca5e0e71be73658bac12afb901ec779f 336 Gene3D G3DSA:3.20.20.70 2 336 6.1E-142 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1331 ca5e0e71be73658bac12afb901ec779f 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 17-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 FORC55_1331 ca5e0e71be73658bac12afb901ec779f 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.9E-147 T 17-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 FORC55_1331 ca5e0e71be73658bac12afb901ec779f 336 PIRSF PIRSF000164 10 336 1.2E-102 T 17-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 FORC55_1331 ca5e0e71be73658bac12afb901ec779f 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.3E-89 T 17-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 FORC55_1331 ca5e0e71be73658bac12afb901ec779f 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.074 T 17-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 FORC55_1455 3ff29fa7bb4ddfcd8d2422571b921502 158 Gene3D G3DSA:3.40.630.30 7 137 9.2E-34 T 17-10-2018 FORC55_1455 3ff29fa7bb4ddfcd8d2422571b921502 158 SUPERFAMILY SSF55729 4 148 6.93E-27 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_1455 3ff29fa7bb4ddfcd8d2422571b921502 158 Pfam PF00583 Acetyltransferase (GNAT) family 26 146 2.4E-17 T 17-10-2018 IPR000182 GNAT domain FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 577 58.154 T 17-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 421 6.0E-14 T 17-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 5.6E-13 T 17-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 545 1.4E-4 T 17-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 2.4E-8 T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 2.4E-8 T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 SUPERFAMILY SSF56014 434 566 3.66E-32 T 17-10-2018 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 Gene3D G3DSA:3.30.413.10 432 574 1.0E-33 T 17-10-2018 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 7.8E-280 T 17-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 Gene3D G3DSA:3.30.413.10 146 353 1.7E-82 T 17-10-2018 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 SUPERFAMILY SSF55124 19 150 9.81E-27 T 17-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 Gene3D G3DSA:3.90.480.20 22 414 1.7E-82 T 17-10-2018 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 SUPERFAMILY SSF56014 154 349 5.1E-58 T 17-10-2018 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 SUPERFAMILY SSF55124 351 428 4.25E-21 T 17-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_2402 ac7265d1aa2c3250dbbd2f8339a207a7 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 334 4.0E-45 T 17-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 FORC55_0035 b1a4fe24a10382f5f527337aa995a890 371 SUPERFAMILY SSF102405 81 288 9.29E-45 T 17-10-2018 FORC55_0035 b1a4fe24a10382f5f527337aa995a890 371 Gene3D G3DSA:3.40.50.450 1 291 5.7E-100 T 17-10-2018 FORC55_0035 b1a4fe24a10382f5f527337aa995a890 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 287 8.1E-78 T 17-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 FORC55_0035 b1a4fe24a10382f5f527337aa995a890 371 Gene3D G3DSA:1.10.10.10 302 367 6.2E-5 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0035 b1a4fe24a10382f5f527337aa995a890 371 Pfam PF02481 DNA recombination-mediator protein A 76 278 2.8E-80 T 17-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 FORC55_1731 597e3588d7cd6255285feac03d0e0488 365 Gene3D G3DSA:3.40.50.2300 11 149 7.3E-36 T 17-10-2018 FORC55_1731 597e3588d7cd6255285feac03d0e0488 365 SUPERFAMILY SSF52172 24 138 4.98E-35 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1731 597e3588d7cd6255285feac03d0e0488 365 Pfam PF00072 Response regulator receiver domain 24 134 4.3E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1731 597e3588d7cd6255285feac03d0e0488 365 Gene3D G3DSA:3.60.40.10 162 331 2.2E-8 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 FORC55_1731 597e3588d7cd6255285feac03d0e0488 365 SMART SM00448 22 134 1.2E-32 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0157 650180ecf845b3dae2ec4b5660cfd2a2 117 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0157 650180ecf845b3dae2ec4b5660cfd2a2 117 Gene3D G3DSA:3.30.1300.30 30 117 1.9E-36 T 17-10-2018 FORC55_0157 650180ecf845b3dae2ec4b5660cfd2a2 117 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 24 8.3E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0157 650180ecf845b3dae2ec4b5660cfd2a2 117 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.1E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0157 650180ecf845b3dae2ec4b5660cfd2a2 117 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 103 2.3E-43 T 17-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 FORC55_0157 650180ecf845b3dae2ec4b5660cfd2a2 117 Pfam PF02501 Type II secretion system (T2SS), protein I 40 115 1.0E-22 T 17-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 FORC55_0157 650180ecf845b3dae2ec4b5660cfd2a2 117 SUPERFAMILY SSF54523 37 115 1.33E-23 T 17-10-2018 FORC55_3110 945fc0c5efa9fde9b9dbc18535a4c16b 59 Pfam PF04875 Protein of unknown function, DUF645 1 59 3.7E-31 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_0859 d78e88f8b43450f9934f59e60ecec7ba 200 SMART SM01144 1 190 1.9E-65 T 17-10-2018 IPR005636 DTW FORC55_0859 d78e88f8b43450f9934f59e60ecec7ba 200 Pfam PF03942 DTW domain 3 185 1.0E-49 T 17-10-2018 IPR005636 DTW FORC55_0660 2a2ffc0952b428f84988c9de43399d55 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.0E-22 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain FORC55_0660 2a2ffc0952b428f84988c9de43399d55 249 SUPERFAMILY SSF117143 77 207 2.75E-17 T 17-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like FORC55_0660 2a2ffc0952b428f84988c9de43399d55 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.1E-5 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 FORC55_0660 2a2ffc0952b428f84988c9de43399d55 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 9.2E-54 T 17-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 FORC55_0660 2a2ffc0952b428f84988c9de43399d55 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.7E-34 T 17-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G FORC55_2630 4e09b34a104dd6fd1a83245bd572b2c8 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.9E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2630 4e09b34a104dd6fd1a83245bd572b2c8 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.9E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2630 4e09b34a104dd6fd1a83245bd572b2c8 193 Gene3D G3DSA:1.10.357.10 6 193 6.8E-65 T 17-10-2018 FORC55_2630 4e09b34a104dd6fd1a83245bd572b2c8 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 9.6E-16 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_2630 4e09b34a104dd6fd1a83245bd572b2c8 193 SUPERFAMILY SSF46689 9 84 3.24E-17 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1160 f9004f6f1b049b6d629cf233495a3a5a 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 2.8E-37 T 17-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 FORC55_1160 f9004f6f1b049b6d629cf233495a3a5a 77 Pfam PF06667 Phage shock protein B 3 74 4.5E-33 T 17-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 FORC55_0871 5358e2a1962821b820e52f5d0d681750 196 SUPERFAMILY SSF46689 8 78 2.14E-6 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0871 5358e2a1962821b820e52f5d0d681750 196 Gene3D G3DSA:1.10.357.10 1 192 6.2E-40 T 17-10-2018 FORC55_0871 5358e2a1962821b820e52f5d0d681750 196 SUPERFAMILY SSF48498 84 195 6.23E-18 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily FORC55_0871 5358e2a1962821b820e52f5d0d681750 196 Pfam PF13305 WHG domain 92 172 5.7E-11 T 17-10-2018 IPR025996 WHG domain FORC55_2346 d5f363b8a0bafaaafa6b6a396f66f39d 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.682 T 17-10-2018 IPR023065 Uncharacterised protein family ApaG FORC55_2346 d5f363b8a0bafaaafa6b6a396f66f39d 126 Gene3D G3DSA:2.60.40.1470 1 126 3.5E-48 T 17-10-2018 IPR036767 ApaG domain superfamily FORC55_2346 d5f363b8a0bafaaafa6b6a396f66f39d 126 Pfam PF04379 ApaG domain 18 102 8.7E-33 T 17-10-2018 IPR007474 ApaG domain FORC55_2346 d5f363b8a0bafaaafa6b6a396f66f39d 126 SUPERFAMILY SSF110069 7 126 2.49E-47 T 17-10-2018 IPR036767 ApaG domain superfamily FORC55_1814 81ebc646062f48fd120f0b664273bb34 154 Gene3D G3DSA:3.40.390.30 1 154 1.3E-59 T 17-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 FORC55_1814 81ebc646062f48fd120f0b664273bb34 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 17-10-2018 IPR020549 Endoribonuclease YbeY, conserved site FORC55_1814 81ebc646062f48fd120f0b664273bb34 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 144 4.5E-38 T 17-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 FORC55_1814 81ebc646062f48fd120f0b664273bb34 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.459 T 17-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 FORC55_1814 81ebc646062f48fd120f0b664273bb34 154 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 9.4E-39 T 17-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 FORC55_1814 81ebc646062f48fd120f0b664273bb34 154 SUPERFAMILY SSF55486 3 149 2.44E-49 T 17-10-2018 FORC55_0219 a62196109cc4743d1290e8e142408c84 257 SUPERFAMILY SSF51351 2 251 1.96E-89 T 17-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0219 a62196109cc4743d1290e8e142408c84 257 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 3.2E-79 T 17-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0219 a62196109cc4743d1290e8e142408c84 257 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.472 T 17-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0219 a62196109cc4743d1290e8e142408c84 257 Gene3D G3DSA:3.20.20.70 1 256 4.3E-100 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0219 a62196109cc4743d1290e8e142408c84 257 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 17-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0219 a62196109cc4743d1290e8e142408c84 257 Pfam PF00121 Triosephosphate isomerase 5 247 1.7E-87 T 17-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 Pfam PF07549 SecD/SecF GG Motif 104 130 3.5E-7 T 17-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 Pfam PF13721 SecD export protein N-terminal TM region 1 92 3.3E-28 T 17-10-2018 IPR027398 SecD export protein N-terminal TM domain FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 Gene3D G3DSA:1.20.1640.10 439 591 1.5E-7 T 17-10-2018 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 PRINTS PR00702 Acriflavin resistance protein family signature 569 592 2.5E-5 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 2.5E-5 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 PRINTS PR00702 Acriflavin resistance protein family signature 494 518 2.5E-5 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 592 4.7E-150 T 17-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 Pfam PF02355 Protein export membrane protein 424 585 5.8E-19 T 17-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 Gene3D G3DSA:3.30.70.3400 208 428 2.9E-49 T 17-10-2018 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 SUPERFAMILY SSF82866 401 597 8.5E-45 T 17-10-2018 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 Gene3D G3DSA:3.30.1360.200 269 422 2.9E-49 T 17-10-2018 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 606 46.727 T 17-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 FORC55_2001 0a4e01b7e230f17fe7ea9efe3ac036da 606 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 336 585 1.7E-82 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial FORC55_1332 08a87d255fd136060dd60f4af4918ccd 180 PIRSF PIRSF010252 1 178 1.8E-67 T 17-10-2018 IPR009809 Cell division protein ZapC FORC55_1332 08a87d255fd136060dd60f4af4918ccd 180 Pfam PF07126 Cell-division protein ZapC 1 168 7.9E-62 T 17-10-2018 IPR009809 Cell division protein ZapC FORC55_1332 08a87d255fd136060dd60f4af4918ccd 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 38.204 T 17-10-2018 IPR009809 Cell division protein ZapC FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 Pfam PF08238 Sel1 repeat 196 206 2.2 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 Pfam PF08238 Sel1 repeat 137 169 0.085 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 Pfam PF08238 Sel1 repeat 207 242 6.5E-5 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 Pfam PF08238 Sel1 repeat 82 97 0.3 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 SMART SM00671 207 242 1.7E-4 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 SMART SM00671 135 170 11.0 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 SMART SM00671 171 206 93.0 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 SMART SM00671 67 97 330.0 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 Gene3D G3DSA:1.25.40.10 192 319 9.2E-17 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 SUPERFAMILY SSF81901 79 281 1.31E-25 T 17-10-2018 FORC55_3604 43442d63ac0cb212573ed1b041c92191 385 Gene3D G3DSA:1.25.40.10 28 178 3.5E-12 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_3288 2b45c3736b7592ed73ce39d9a859b24d 105 Pfam PF01022 Bacterial regulatory protein, arsR family 30 75 5.5E-9 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_3288 2b45c3736b7592ed73ce39d9a859b24d 105 Gene3D G3DSA:1.10.10.10 9 105 2.5E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3288 2b45c3736b7592ed73ce39d9a859b24d 105 SUPERFAMILY SSF46785 11 104 1.48E-23 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3288 2b45c3736b7592ed73ce39d9a859b24d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 3.0E-11 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_3288 2b45c3736b7592ed73ce39d9a859b24d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 25 40 3.0E-11 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_3288 2b45c3736b7592ed73ce39d9a859b24d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 3.0E-11 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_3288 2b45c3736b7592ed73ce39d9a859b24d 105 SMART SM00418 23 101 2.1E-18 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Gene3D G3DSA:1.10.730.10 577 819 1.5E-69 T 17-10-2018 FORC55_0376 d786210ded8490d9346488de295cbae5 953 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.0E-35 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 FORC55_0376 d786210ded8490d9346488de295cbae5 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.0E-35 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 FORC55_0376 d786210ded8490d9346488de295cbae5 953 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.0E-35 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 FORC55_0376 d786210ded8490d9346488de295cbae5 953 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.0E-35 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 FORC55_0376 d786210ded8490d9346488de295cbae5 953 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.0E-35 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 FORC55_0376 d786210ded8490d9346488de295cbae5 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Gene3D G3DSA:3.90.740.10 204 241 6.1E-6 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Gene3D G3DSA:3.40.50.620 306 555 2.9E-71 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0376 d786210ded8490d9346488de295cbae5 953 SUPERFAMILY SSF47323 642 900 8.78E-68 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 951 16.058 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Gene3D G3DSA:1.10.287.380 879 951 1.3E-18 T 17-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 FORC55_0376 d786210ded8490d9346488de295cbae5 953 SUPERFAMILY SSF46589 886 950 8.89E-18 T 17-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 5.3E-225 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Gene3D G3DSA:3.90.740.10 242 297 6.4E-6 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 FORC55_0376 d786210ded8490d9346488de295cbae5 953 SUPERFAMILY SSF50677 190 365 4.45E-60 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Pfam PF08264 Anticodon-binding domain of tRNA 675 827 9.4E-40 T 17-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 FORC55_0376 d786210ded8490d9346488de295cbae5 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_0376 d786210ded8490d9346488de295cbae5 953 Gene3D G3DSA:3.40.50.620 2 203 4.2E-65 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0376 d786210ded8490d9346488de295cbae5 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 946 3.7E-18 T 17-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 FORC55_0376 d786210ded8490d9346488de295cbae5 953 SUPERFAMILY SSF52374 1 641 3.82E-137 T 17-10-2018 FORC55_2607 3e1c59f83f25408886e584d339bccd89 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2607 3e1c59f83f25408886e584d339bccd89 261 SUPERFAMILY SSF52540 3 232 5.66E-56 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2607 3e1c59f83f25408886e584d339bccd89 261 Gene3D G3DSA:3.40.50.300 1 254 1.3E-62 T 17-10-2018 FORC55_2607 3e1c59f83f25408886e584d339bccd89 261 Pfam PF00005 ABC transporter 22 166 3.5E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2607 3e1c59f83f25408886e584d339bccd89 261 SMART SM00382 26 214 3.2E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SMART SM00448 4 115 4.7E-32 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SMART SM00382 149 293 2.3E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Gene3D G3DSA:1.10.10.60 414 474 2.1E-9 T 17-10-2018 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Pfam PF00158 Sigma-54 interaction domain 135 295 2.0E-65 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SUPERFAMILY SSF46689 342 468 1.7E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 6.2E-13 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SUPERFAMILY SSF52172 3 173 2.13E-39 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Gene3D G3DSA:3.40.50.2300 1 119 4.2E-33 T 17-10-2018 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Gene3D G3DSA:1.10.8.60 301 379 1.0E-32 T 17-10-2018 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SUPERFAMILY SSF52540 139 370 8.15E-72 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Pfam PF00072 Response regulator receiver domain 6 115 1.0E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0716 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Gene3D G3DSA:3.40.50.300 120 300 5.9E-65 T 17-10-2018 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 5.0E-13 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 5.0E-13 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 5.0E-13 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 SUPERFAMILY SSF81336 93 262 1.15E-49 T 17-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.0E-44 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 Pfam PF00119 ATP synthase A chain 44 262 1.7E-58 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 17-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 Gene3D G3DSA:1.20.120.220 92 268 4.7E-66 T 17-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2652 b38a2472baab8f524975350c6efd4c49 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.353 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6838 6856 - T 17-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Pfam PF13519 von Willebrand factor type A domain 6419 6529 4.7E-10 T 17-10-2018 IPR002035 von Willebrand factor, type A FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 PRINTS PR00313 NodO calcium binding signature 6143 6154 8.6E-7 T 17-10-2018 FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 PRINTS PR00313 NodO calcium binding signature 6833 6841 8.6E-7 T 17-10-2018 FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 PRINTS PR00313 NodO calcium binding signature 6392 6400 8.6E-7 T 17-10-2018 FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 PRINTS PR00313 NodO calcium binding signature 6860 6869 8.6E-7 T 17-10-2018 FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Pfam PF07691 PA14 domain 5881 5954 1.5E-4 T 17-10-2018 IPR011658 PA14 domain FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6847 6865 - T 17-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 SUPERFAMILY SSF51120 6744 6935 3.4E-20 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3588 3670 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4501 4582 1.2E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3671 3753 9.1E-6 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3256 3338 9.0E-6 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3422 3504 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 600 682 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3920 4002 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2425 2507 1.7E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4667 4748 1.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4003 4084 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1098 1180 1.2E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2176 2259 1.6E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3837 3919 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 351 432 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1181 1262 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3173 3255 1.2E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 5331 5412 1.2E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2592 2674 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1347 1429 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4252 4334 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 5247 5330 1.6E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 162 267 3.2E-29 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 932 1014 1.2E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2675 2756 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4335 4417 9.9E-6 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 517 599 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1430 1512 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2260 2342 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 433 516 1.8E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3754 3836 9.9E-6 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 5497 5579 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4418 4500 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3006 3088 1.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2757 2839 1.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2508 2591 1.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3339 3421 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1679 1761 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4169 4251 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2924 3005 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1927 2009 1.4E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4085 4168 1.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 5692 5790 6.6E-10 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 5580 5691 8.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 5164 5246 1.4E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4749 4832 1.4E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 849 931 9.8E-6 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3089 3172 1.6E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 3505 3587 1.2E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4583 4666 1.4E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 766 848 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 268 350 1.2E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2840 2923 1.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4916 4998 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2010 2093 1.7E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1762 1844 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4999 5081 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1596 1678 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1845 1926 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2094 2175 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1015 1097 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 4833 4915 1.6E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 5082 5163 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 2343 2424 1.0E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1263 1346 1.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 5413 5496 1.5E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 683 765 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 Gene3D G3DSA:2.60.40.10 1513 1595 1.1E-5 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 SMART SM00327 6415 6600 7.6E-14 T 17-10-2018 IPR002035 von Willebrand factor, type A FORC55_1215 ca49f345791d0ba320278c5c6d9dd484 6956 SUPERFAMILY SSF53300 6404 6580 6.68E-23 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_0765 de824f33756c8dcc4f22fc99a83ae5cb 262 Pfam PF00005 ABC transporter 20 148 1.8E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0765 de824f33756c8dcc4f22fc99a83ae5cb 262 SUPERFAMILY SSF52540 3 227 4.13E-52 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0765 de824f33756c8dcc4f22fc99a83ae5cb 262 Gene3D G3DSA:3.40.50.300 1 240 8.2E-56 T 17-10-2018 FORC55_0765 de824f33756c8dcc4f22fc99a83ae5cb 262 SMART SM00382 29 198 7.2E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0606 747927490c730701cc174f2f4c0b4bdc 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 17-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 FORC55_0606 747927490c730701cc174f2f4c0b4bdc 280 Pfam PF01148 Cytidylyltransferase family 2 280 2.0E-73 T 17-10-2018 FORC55_2282 a3f0b5de177bcaf52c8c0750c2b29e63 250 SUPERFAMILY SSF64167 1 246 1.57E-85 T 17-10-2018 FORC55_2282 a3f0b5de177bcaf52c8c0750c2b29e63 250 Pfam PF01975 Survival protein SurE 3 181 5.0E-61 T 17-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 FORC55_2282 a3f0b5de177bcaf52c8c0750c2b29e63 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 41.795 T 17-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 FORC55_2282 a3f0b5de177bcaf52c8c0750c2b29e63 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 1.7E-73 T 17-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 FORC55_2282 a3f0b5de177bcaf52c8c0750c2b29e63 250 Gene3D G3DSA:3.40.1210.10 1 250 1.5E-95 T 17-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 FORC55_2720 f7cdad5af43e2ba68935c8980f449360 624 SUPERFAMILY SSF63829 288 591 6.21E-16 T 17-10-2018 FORC55_2720 f7cdad5af43e2ba68935c8980f449360 624 Pfam PF05787 Bacterial protein of unknown function (DUF839) 56 591 1.0E-210 T 17-10-2018 IPR008557 Protein of unknown function DUF839 FORC55_3258 98e0bf3ce0ceb0c3f382bb686ebb01ec 582 Pfam PF01268 Formate--tetrahydrofolate ligase 4 581 2.2E-238 T 17-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 FORC55_3258 98e0bf3ce0ceb0c3f382bb686ebb01ec 582 Gene3D G3DSA:3.30.1510.10 129 264 1.5E-191 T 17-10-2018 FORC55_3258 98e0bf3ce0ceb0c3f382bb686ebb01ec 582 SUPERFAMILY SSF52540 4 580 1.06E-214 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3258 98e0bf3ce0ceb0c3f382bb686ebb01ec 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.079 T 17-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 FORC55_3258 98e0bf3ce0ceb0c3f382bb686ebb01ec 582 Gene3D G3DSA:3.40.50.300 4 454 1.5E-191 T 17-10-2018 FORC55_3258 98e0bf3ce0ceb0c3f382bb686ebb01ec 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 17-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 FORC55_3258 98e0bf3ce0ceb0c3f382bb686ebb01ec 582 Gene3D G3DSA:3.10.410.10 470 558 5.5E-31 T 17-10-2018 FORC55_3258 98e0bf3ce0ceb0c3f382bb686ebb01ec 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 17-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 FORC55_2528 3904026808a11ef978449cc586b63199 377 Gene3D G3DSA:3.40.50.620 5 182 4.5E-17 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2528 3904026808a11ef978449cc586b63199 377 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 4 342 1.6E-83 T 17-10-2018 IPR020022 N-acetyl sugar amidotransferase FORC55_2528 3904026808a11ef978449cc586b63199 377 SUPERFAMILY SSF52402 52 320 1.19E-27 T 17-10-2018 FORC55_1549 47f76d28949d4f294c4c98d72dc76532 342 Gene3D G3DSA:3.40.630.10 1 342 3.5E-122 T 17-10-2018 FORC55_1549 47f76d28949d4f294c4c98d72dc76532 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 1.5E-75 T 17-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 FORC55_1549 47f76d28949d4f294c4c98d72dc76532 342 SUPERFAMILY SSF53187 9 329 3.64E-79 T 17-10-2018 FORC55_1549 47f76d28949d4f294c4c98d72dc76532 342 PIRSF PIRSF017020 4 336 6.5E-120 T 17-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 FORC55_1549 47f76d28949d4f294c4c98d72dc76532 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 133.871 T 17-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 FORC55_2464 d74ea1e2b62ad5cb38fff94f6d7fc3b3 370 Hamap MF_00215 Pantothenate kinase [coaA]. 1 370 213.217 T 17-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 FORC55_2464 d74ea1e2b62ad5cb38fff94f6d7fc3b3 370 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 66 370 3.9E-144 T 17-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 FORC55_2464 d74ea1e2b62ad5cb38fff94f6d7fc3b3 370 SUPERFAMILY SSF52540 65 370 9.4E-75 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2464 d74ea1e2b62ad5cb38fff94f6d7fc3b3 370 Gene3D G3DSA:3.40.50.300 56 370 1.0E-90 T 17-10-2018 FORC55_2464 d74ea1e2b62ad5cb38fff94f6d7fc3b3 370 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 145 302 1.9E-13 T 17-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 FORC55_0620 274a49e2fdbd01648fdf22488c1189e6 174 Gene3D G3DSA:2.40.128.20 1 167 3.5E-73 T 17-10-2018 IPR012674 Calycin FORC55_0620 274a49e2fdbd01648fdf22488c1189e6 174 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 8 157 2.0E-84 T 17-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 FORC55_0620 274a49e2fdbd01648fdf22488c1189e6 174 PIRSF PIRSF011561 1 174 4.9E-92 T 17-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 FORC55_0620 274a49e2fdbd01648fdf22488c1189e6 174 Pfam PF05870 Phenolic acid decarboxylase (PAD) 8 164 3.5E-80 T 17-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 FORC55_0620 274a49e2fdbd01648fdf22488c1189e6 174 SUPERFAMILY SSF50814 2 165 2.98E-68 T 17-10-2018 IPR012674 Calycin FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 2.8E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 2.8E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 2.8E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 2.8E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 Gene3D G3DSA:3.30.565.10 272 434 3.9E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 SUPERFAMILY SSF52172 450 569 4.13E-38 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 Pfam PF00072 Response regulator receiver domain 454 564 5.9E-28 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 SUPERFAMILY SSF55874 262 429 9.69E-49 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 SMART SM00388 209 273 1.2E-19 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 Gene3D G3DSA:3.40.50.2300 435 567 4.9E-40 T 17-10-2018 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 1.8E-17 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 SMART SM00448 452 564 3.2E-37 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 SMART SM00387 320 431 1.4E-38 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 430 1.2E-33 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 Gene3D G3DSA:1.10.287.130 175 271 8.8E-24 T 17-10-2018 FORC55_1361 d6802962a01fdabcc893cdd487e13cf8 570 SUPERFAMILY SSF47384 194 274 6.87E-20 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1756 b0fa5f1ee251f891d528cfcc5a49fbca 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.718 T 17-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1756 b0fa5f1ee251f891d528cfcc5a49fbca 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.0E-38 T 17-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1756 b0fa5f1ee251f891d528cfcc5a49fbca 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 2.1E-102 T 17-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_1756 b0fa5f1ee251f891d528cfcc5a49fbca 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 3.3E-8 T 17-10-2018 FORC55_1756 b0fa5f1ee251f891d528cfcc5a49fbca 329 SUPERFAMILY SSF102114 7 287 8.11E-67 T 17-10-2018 FORC55_1756 b0fa5f1ee251f891d528cfcc5a49fbca 329 Pfam PF04055 Radical SAM superfamily 19 181 5.2E-26 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_1756 b0fa5f1ee251f891d528cfcc5a49fbca 329 Gene3D G3DSA:3.20.20.70 2 329 9.9E-79 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1756 b0fa5f1ee251f891d528cfcc5a49fbca 329 SMART SM00729 14 222 1.2E-4 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_1325 2235d275f58c278125640da9e40e33f5 157 Gene3D G3DSA:3.30.450.40 2 157 3.2E-63 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_1325 2235d275f58c278125640da9e40e33f5 157 Pfam PF13185 GAF domain 44 146 9.6E-10 T 17-10-2018 IPR003018 GAF domain GO:0005515 FORC55_1325 2235d275f58c278125640da9e40e33f5 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 17-10-2018 IPR000614 Free Met sulfoxide reductase conserved site FORC55_1325 2235d275f58c278125640da9e40e33f5 157 SUPERFAMILY SSF55781 4 145 2.45E-39 T 17-10-2018 FORC55_3611 59f9d6fef2fc1b02c649a33bf0642fd7 659 SUPERFAMILY SSF58104 350 659 1.1E-71 T 17-10-2018 FORC55_3611 59f9d6fef2fc1b02c649a33bf0642fd7 659 Gene3D G3DSA:1.10.287.950 329 659 1.5E-68 T 17-10-2018 FORC55_3611 59f9d6fef2fc1b02c649a33bf0642fd7 659 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 131 2.7E-12 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain FORC55_3611 59f9d6fef2fc1b02c649a33bf0642fd7 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 442 625 9.8E-43 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3611 59f9d6fef2fc1b02c649a33bf0642fd7 659 SMART SM00283 397 658 4.1E-75 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3611 59f9d6fef2fc1b02c649a33bf0642fd7 659 SMART SM00304 330 382 0.003 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3248 498570b199bf820af135dc0fd41427f8 409 Gene3D G3DSA:3.40.190.10 144 388 9.6E-86 T 17-10-2018 FORC55_3248 498570b199bf820af135dc0fd41427f8 409 PRINTS PR00181 Maltose binding protein signature 364 383 1.9E-6 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3248 498570b199bf820af135dc0fd41427f8 409 PRINTS PR00181 Maltose binding protein signature 135 154 1.9E-6 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3248 498570b199bf820af135dc0fd41427f8 409 PRINTS PR00181 Maltose binding protein signature 156 175 1.9E-6 T 17-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 FORC55_3248 498570b199bf820af135dc0fd41427f8 409 Pfam PF13416 Bacterial extracellular solute-binding protein 49 346 1.5E-30 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_3248 498570b199bf820af135dc0fd41427f8 409 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 138 155 - T 17-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 FORC55_3248 498570b199bf820af135dc0fd41427f8 409 Gene3D G3DSA:3.40.190.10 48 364 9.6E-86 T 17-10-2018 FORC55_3248 498570b199bf820af135dc0fd41427f8 409 SUPERFAMILY SSF53850 36 402 3.76E-67 T 17-10-2018 FORC55_3638 81ecdf01da064429715b3f10efcba407 301 SUPERFAMILY SSF46785 7 86 7.79E-23 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3638 81ecdf01da064429715b3f10efcba407 301 Pfam PF03466 LysR substrate binding domain 92 294 8.5E-38 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3638 81ecdf01da064429715b3f10efcba407 301 Gene3D G3DSA:1.10.10.10 6 94 1.8E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3638 81ecdf01da064429715b3f10efcba407 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.4E-20 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3638 81ecdf01da064429715b3f10efcba407 301 Gene3D G3DSA:3.40.190.290 96 294 2.9E-58 T 17-10-2018 FORC55_3638 81ecdf01da064429715b3f10efcba407 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3638 81ecdf01da064429715b3f10efcba407 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3638 81ecdf01da064429715b3f10efcba407 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3638 81ecdf01da064429715b3f10efcba407 301 SUPERFAMILY SSF53850 93 298 3.62E-38 T 17-10-2018 FORC55_0196 6828ec7849383c6c80f9f85043ab2ed5 158 Gene3D G3DSA:3.40.1280.10 1 158 8.1E-64 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_0196 6828ec7849383c6c80f9f85043ab2ed5 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 155 32.9 T 17-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 FORC55_0196 6828ec7849383c6c80f9f85043ab2ed5 158 PIRSF PIRSF029256 1 158 1.8E-66 T 17-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 FORC55_0196 6828ec7849383c6c80f9f85043ab2ed5 158 SUPERFAMILY SSF75217 2 156 7.85E-44 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_0196 6828ec7849383c6c80f9f85043ab2ed5 158 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 156 7.6E-58 T 17-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 FORC55_0196 6828ec7849383c6c80f9f85043ab2ed5 158 Pfam PF00588 SpoU rRNA Methylase family 3 145 7.5E-35 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 FORC55_0721 9f45582a7837858b1dd4a8c09fa28690 439 SUPERFAMILY SSF52540 94 362 9.62E-96 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0721 9f45582a7837858b1dd4a8c09fa28690 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 3.3E-174 T 17-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_0721 9f45582a7837858b1dd4a8c09fa28690 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 5.8E-73 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_0721 9f45582a7837858b1dd4a8c09fa28690 439 SMART SM00382 158 342 6.7E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0721 9f45582a7837858b1dd4a8c09fa28690 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 17-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_0721 9f45582a7837858b1dd4a8c09fa28690 439 Gene3D G3DSA:3.40.50.12240 17 439 2.9E-156 T 17-10-2018 FORC55_0721 9f45582a7837858b1dd4a8c09fa28690 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 2.6E-194 T 17-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.006 T 17-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.0E-49 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 Gene3D G3DSA:3.50.50.60 7 333 4.3E-93 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 SUPERFAMILY SSF51905 1 319 9.72E-54 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.6E-27 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.6E-27 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.6E-27 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.6E-27 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.6E-27 T 17-10-2018 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 Gene3D G3DSA:3.50.50.60 158 276 4.3E-93 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 Gene3D G3DSA:3.30.390.30 345 464 1.8E-32 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.5E-29 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 7.0E-58 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_0125 b9098a7ee830ad8d6a5f9ccefa155e20 466 PIRSF PIRSF000350 1 463 4.6E-71 T 17-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 FORC55_0110 8d2466a84642c0d8b7afd3189580854d 275 Gene3D G3DSA:3.30.1240.10 90 197 1.5E-74 T 17-10-2018 FORC55_0110 8d2466a84642c0d8b7afd3189580854d 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 2.0E-59 T 17-10-2018 IPR000150 Cof family GO:0016787 FORC55_0110 8d2466a84642c0d8b7afd3189580854d 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 3.8E-66 T 17-10-2018 FORC55_0110 8d2466a84642c0d8b7afd3189580854d 275 SUPERFAMILY SSF56784 7 274 2.1E-68 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_0110 8d2466a84642c0d8b7afd3189580854d 275 Gene3D G3DSA:3.40.50.1000 13 266 1.5E-74 T 17-10-2018 IPR023214 HAD superfamily FORC55_0110 8d2466a84642c0d8b7afd3189580854d 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 17-10-2018 FORC55_0110 8d2466a84642c0d8b7afd3189580854d 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 17-10-2018 FORC55_0110 8d2466a84642c0d8b7afd3189580854d 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 3.9E-31 T 17-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 FORC55_3297 5b6069533443f8cc08fb6e15e9b56e34 193 Pfam PF09335 SNARE associated Golgi protein 36 152 3.8E-11 T 17-10-2018 IPR032816 SNARE associated Golgi protein FORC55_1471 ca187d4612b536a8b87d1b9c3e3e35bd 160 SUPERFAMILY SSF53146 1 97 4.97E-18 T 17-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily FORC55_1471 ca187d4612b536a8b87d1b9c3e3e35bd 160 Gene3D G3DSA:3.30.420.130 3 107 1.7E-11 T 17-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily FORC55_1471 ca187d4612b536a8b87d1b9c3e3e35bd 160 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 90 1.2E-8 T 17-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis FORC55_1285 e14cdc2f05122e1f73e698cb848e2bfb 282 SUPERFAMILY SSF56091 28 200 3.6E-36 T 17-10-2018 FORC55_1285 e14cdc2f05122e1f73e698cb848e2bfb 282 Pfam PF14743 DNA ligase OB-like domain 215 279 2.8E-28 T 17-10-2018 IPR029319 DNA ligase, OB-like domain FORC55_1285 e14cdc2f05122e1f73e698cb848e2bfb 282 SUPERFAMILY SSF50249 174 279 4.97E-31 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1285 e14cdc2f05122e1f73e698cb848e2bfb 282 Gene3D G3DSA:3.30.1490.70 33 192 1.1E-52 T 17-10-2018 FORC55_1285 e14cdc2f05122e1f73e698cb848e2bfb 282 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 177 200 - T 17-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 FORC55_1285 e14cdc2f05122e1f73e698cb848e2bfb 282 Gene3D G3DSA:3.30.470.30 53 153 1.1E-52 T 17-10-2018 FORC55_1285 e14cdc2f05122e1f73e698cb848e2bfb 282 Gene3D G3DSA:2.40.50.140 213 282 1.2E-8 T 17-10-2018 FORC55_1285 e14cdc2f05122e1f73e698cb848e2bfb 282 Pfam PF01068 ATP dependent DNA ligase domain 50 200 1.3E-6 T 17-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 FORC55_3468 0bffd26a30d8c97e8f7d227951c96890 98 Gene3D G3DSA:1.10.287.950 1 98 8.5E-33 T 17-10-2018 FORC55_3468 0bffd26a30d8c97e8f7d227951c96890 98 SUPERFAMILY SSF58104 1 96 4.84E-34 T 17-10-2018 FORC55_3468 0bffd26a30d8c97e8f7d227951c96890 98 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 20 49 1.2E-9 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3468 0bffd26a30d8c97e8f7d227951c96890 98 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 97 1.2E-9 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3468 0bffd26a30d8c97e8f7d227951c96890 98 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 1 97 6.5E-27 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1773 62197972b892784501bcaaead2ce55f0 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.591 T 17-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 FORC55_1773 62197972b892784501bcaaead2ce55f0 504 Pfam PF13522 Glutamine amidotransferase domain 64 199 3.0E-17 T 17-10-2018 FORC55_1773 62197972b892784501bcaaead2ce55f0 504 Gene3D G3DSA:3.40.50.2020 276 440 2.1E-157 T 17-10-2018 FORC55_1773 62197972b892784501bcaaead2ce55f0 504 Gene3D G3DSA:3.60.20.10 2 411 2.1E-157 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_1773 62197972b892784501bcaaead2ce55f0 504 PIRSF PIRSF000485 1 480 1.4E-168 T 17-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 FORC55_1773 62197972b892784501bcaaead2ce55f0 504 SUPERFAMILY SSF53271 249 482 4.59E-70 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like FORC55_1773 62197972b892784501bcaaead2ce55f0 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.6E-165 T 17-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 FORC55_1773 62197972b892784501bcaaead2ce55f0 504 SUPERFAMILY SSF56235 2 256 5.66E-71 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_1711 88c5debbd424132970389f38e7924713 165 Gene3D G3DSA:3.90.190.10 5 164 6.5E-34 T 17-10-2018 IPR029021 Protein-tyrosine phosphatase-like FORC55_1711 88c5debbd424132970389f38e7924713 165 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 111 121 - T 17-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 FORC55_1711 88c5debbd424132970389f38e7924713 165 SUPERFAMILY SSF52799 15 163 2.45E-35 T 17-10-2018 IPR029021 Protein-tyrosine phosphatase-like FORC55_1711 88c5debbd424132970389f38e7924713 165 Pfam PF00782 Dual specificity phosphatase, catalytic domain 35 149 3.2E-9 T 17-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 FORC55_2276 51e10ca8c698d734ebf8802365c4b456 333 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 17-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 FORC55_2276 51e10ca8c698d734ebf8802365c4b456 333 Pfam PF13531 Bacterial extracellular solute-binding protein 45 284 1.0E-36 T 17-10-2018 FORC55_2276 51e10ca8c698d734ebf8802365c4b456 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 330 8.3E-135 T 17-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 FORC55_2276 51e10ca8c698d734ebf8802365c4b456 333 SUPERFAMILY SSF53850 22 330 1.37E-71 T 17-10-2018 FORC55_2276 51e10ca8c698d734ebf8802365c4b456 333 Gene3D G3DSA:3.40.190.10 117 329 3.2E-116 T 17-10-2018 FORC55_2276 51e10ca8c698d734ebf8802365c4b456 333 Gene3D G3DSA:3.40.190.10 30 299 3.2E-116 T 17-10-2018 FORC55_0338 a89a3cb4f2ce3f706c2b387c8fb81383 176 Gene3D G3DSA:3.90.80.10 1 175 2.9E-67 T 17-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 FORC55_0338 a89a3cb4f2ce3f706c2b387c8fb81383 176 SUPERFAMILY SSF50324 3 174 1.96E-65 T 17-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 FORC55_0338 a89a3cb4f2ce3f706c2b387c8fb81383 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.0E-52 T 17-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 FORC55_0338 a89a3cb4f2ce3f706c2b387c8fb81383 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.05 T 17-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 FORC55_0338 a89a3cb4f2ce3f706c2b387c8fb81383 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 17-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 FORC55_2342 757106789cc910e0ac95f28010ed77a6 783 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 755 19.926 T 17-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 FORC55_2342 757106789cc910e0ac95f28010ed77a6 783 Pfam PF04453 Organic solvent tolerance protein 297 684 6.5E-115 T 17-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 FORC55_2342 757106789cc910e0ac95f28010ed77a6 783 Gene3D G3DSA:2.60.450.10 50 99 7.3E-9 T 17-10-2018 FORC55_2342 757106789cc910e0ac95f28010ed77a6 783 Pfam PF03968 OstA-like protein 57 189 3.5E-19 T 17-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal FORC55_2546 3e70bbd7bc548ad4c36d52c50465928b 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 340 1.2E-146 T 17-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 FORC55_2546 3e70bbd7bc548ad4c36d52c50465928b 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 321 5.1E-68 T 17-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 FORC55_2546 3e70bbd7bc548ad4c36d52c50465928b 345 SUPERFAMILY SSF53756 1 343 1.73E-101 T 17-10-2018 FORC55_2546 3e70bbd7bc548ad4c36d52c50465928b 345 Gene3D G3DSA:3.40.50.2000 1 147 2.4E-55 T 17-10-2018 FORC55_2546 3e70bbd7bc548ad4c36d52c50465928b 345 Gene3D G3DSA:3.40.50.2000 162 344 3.5E-58 T 17-10-2018 FORC55_1966 0fd980a9fae576c4d0ae67add882613f 350 Pfam PF01032 FecCD transport family 34 344 1.1E-86 T 17-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 FORC55_1966 0fd980a9fae576c4d0ae67add882613f 350 SUPERFAMILY SSF81345 22 344 5.1E-73 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_1966 0fd980a9fae576c4d0ae67add882613f 350 Gene3D G3DSA:1.10.3470.10 22 348 6.6E-86 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_3644 09f2b4ecf0af6491371c928410c8bd6c 480 PIRSF PIRSF036492 6 478 5.6E-154 T 17-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 FORC55_3644 09f2b4ecf0af6491371c928410c8bd6c 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 FORC55_3644 09f2b4ecf0af6491371c928410c8bd6c 480 Pfam PF00171 Aldehyde dehydrogenase family 7 450 2.3E-86 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 FORC55_3644 09f2b4ecf0af6491371c928410c8bd6c 480 Gene3D G3DSA:3.40.605.10 34 450 3.9E-146 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_3644 09f2b4ecf0af6491371c928410c8bd6c 480 SUPERFAMILY SSF53720 12 451 5.63E-109 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_3644 09f2b4ecf0af6491371c928410c8bd6c 480 Gene3D G3DSA:3.40.309.10 230 430 3.9E-146 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 Gene3D G3DSA:3.30.465.10 196 288 1.4E-30 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 SUPERFAMILY SSF54631 54 190 5.61E-34 T 17-10-2018 FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF03471 Transporter associated domain 204 279 9.0E-22 T 17-10-2018 IPR005170 Transporter-associated domain FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 Gene3D G3DSA:3.10.580.10 49 195 8.8E-54 T 17-10-2018 FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM01091 203 281 1.3E-29 T 17-10-2018 IPR005170 Transporter-associated domain FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM00116 76 125 0.0037 T 17-10-2018 IPR000644 CBS domain FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM00116 139 187 0.028 T 17-10-2018 IPR000644 CBS domain FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 SUPERFAMILY SSF56176 198 280 7.09E-22 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF00571 CBS domain 67 124 1.9E-8 T 17-10-2018 IPR000644 CBS domain FORC55_1815 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF00571 CBS domain 138 187 1.5E-6 T 17-10-2018 IPR000644 CBS domain FORC55_2856 340c86a7296a4ae08e69903f86d4dce6 217 Gene3D G3DSA:3.40.30.10 1 209 4.1E-64 T 17-10-2018 FORC55_2856 340c86a7296a4ae08e69903f86d4dce6 217 Pfam PF01323 DSBA-like thioredoxin domain 5 206 1.5E-35 T 17-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 FORC55_2856 340c86a7296a4ae08e69903f86d4dce6 217 SUPERFAMILY SSF52833 3 209 1.12E-49 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0876 78b5d2b7b4350023a56d6190fa4c59bb 270 PIRSF PIRSF003092 1 270 4.0E-95 T 17-10-2018 IPR025501 ATP binding protein MinD FORC55_0876 78b5d2b7b4350023a56d6190fa4c59bb 270 Pfam PF13614 AAA domain 3 157 1.1E-19 T 17-10-2018 IPR025669 AAA domain FORC55_0876 78b5d2b7b4350023a56d6190fa4c59bb 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 3.3E-111 T 17-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 FORC55_0876 78b5d2b7b4350023a56d6190fa4c59bb 270 Gene3D G3DSA:3.40.50.300 1 260 2.0E-74 T 17-10-2018 FORC55_0876 78b5d2b7b4350023a56d6190fa4c59bb 270 SUPERFAMILY SSF52540 1 268 1.22E-53 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0378 794ed41679df932734eafffc97e27fa6 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.0E-33 T 17-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.517 T 17-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 17-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 Gene3D G3DSA:3.40.630.10 181 497 9.5E-141 T 17-10-2018 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 SUPERFAMILY SSF52949 1 184 1.24E-50 T 17-10-2018 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 Gene3D G3DSA:3.40.220.10 1 159 3.8E-59 T 17-10-2018 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.5E-54 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.5E-54 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.5E-54 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.5E-54 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.5E-54 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 1.2E-123 T 17-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 FORC55_0378 794ed41679df932734eafffc97e27fa6 503 SUPERFAMILY SSF53187 180 495 3.45E-125 T 17-10-2018 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.2E-42 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 Gene3D G3DSA:3.30.572.10 1 283 6.2E-80 T 17-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 SUPERFAMILY SSF55831 3 283 1.44E-91 T 17-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 17-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.492 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 Pfam PF00303 Thymidylate synthase 3 283 2.5E-73 T 17-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 7.2E-14 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 7.2E-14 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 7.2E-14 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_2061 3b9ec2802f44f80706dedf9a74fb821e 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 7.2E-14 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 SMART SM00344 12 121 1.4E-54 T 17-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 17-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 SUPERFAMILY SSF46785 12 70 3.07E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 Gene3D G3DSA:1.10.10.10 1 63 5.1E-32 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.2E-21 T 17-10-2018 FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 Gene3D G3DSA:3.30.70.920 64 159 1.9E-24 T 17-10-2018 FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.6E-24 T 17-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain FORC55_0931 f2a84abe1e146181795b2e6b09e8b2e9 164 SUPERFAMILY SSF54909 74 158 4.69E-22 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 SUPERFAMILY SSF48452 26 172 7.02E-24 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 235 2.0E-78 T 17-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00028 35 68 0.17 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00028 69 102 0.47 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00028 103 136 9.6 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00028 139 172 0.0012 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00386 83 115 66.0 T 17-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00386 153 185 15.0 T 17-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00386 49 81 350.0 T 17-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 Pfam PF13424 Tetratricopeptide repeat 104 169 7.9E-10 T 17-10-2018 FORC55_1223 0d2e74ae0fc85db6b79e61e69e143515 237 Gene3D G3DSA:1.25.40.10 32 237 6.7E-38 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_3130 93d464fe2980eb5a3fbf6784e2d83857 126 SUPERFAMILY SSF46689 2 118 5.55E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3130 93d464fe2980eb5a3fbf6784e2d83857 126 Pfam PF13936 Helix-turn-helix domain 3 45 6.3E-15 T 17-10-2018 IPR025246 Transposase IS30-like HTH domain FORC55_0184 e44663e4ea88918b11bc3035b6298730 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 15 204 3.6E-62 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 FORC55_0184 e44663e4ea88918b11bc3035b6298730 223 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.606 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 FORC55_0184 e44663e4ea88918b11bc3035b6298730 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 8.3E-38 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 Pfam PF00467 KOW motif 131 162 3.0E-7 T 17-10-2018 IPR005824 KOW FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 6.4E-71 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 17-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 17-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.173 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 SMART SM00738 6 115 1.0E-50 T 17-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 17-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 Gene3D G3DSA:3.30.70.940 1 122 3.3E-47 T 17-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 SMART SM00739 127 154 3.2E-5 T 17-10-2018 IPR005824 KOW FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 Gene3D G3DSA:2.30.30.30 123 181 3.4E-26 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 FORC55_2461 f077bb7903556d73621a22a9f7d3134b 182 SUPERFAMILY SSF50104 125 181 7.07E-20 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily FORC55_3169 ccbc00f02398ecb3452eddf78ee54ffe 314 PIRSF PIRSF006230 2 280 5.7E-105 T 17-10-2018 IPR016478 GTPase, MTG1 FORC55_3169 ccbc00f02398ecb3452eddf78ee54ffe 314 Gene3D G3DSA:1.10.1580.10 177 268 2.3E-29 T 17-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily FORC55_3169 ccbc00f02398ecb3452eddf78ee54ffe 314 SUPERFAMILY SSF52540 12 188 4.74E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3169 ccbc00f02398ecb3452eddf78ee54ffe 314 Pfam PF01926 50S ribosome-binding GTPase 120 184 1.3E-14 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_3169 ccbc00f02398ecb3452eddf78ee54ffe 314 Gene3D G3DSA:3.40.50.300 6 174 5.2E-43 T 17-10-2018 FORC55_3169 ccbc00f02398ecb3452eddf78ee54ffe 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 2.8E-108 T 17-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis FORC55_1315 cbf286f251665e9ebee0d12ca4c056d1 246 SUPERFAMILY SSF52467 6 234 6.54E-72 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily FORC55_1315 cbf286f251665e9ebee0d12ca4c056d1 246 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.47 T 17-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 FORC55_1315 cbf286f251665e9ebee0d12ca4c056d1 246 Gene3D G3DSA:3.30.1600.10 22 158 9.8E-80 T 17-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily FORC55_1315 cbf286f251665e9ebee0d12ca4c056d1 246 Gene3D G3DSA:3.40.50.1220 8 225 9.8E-80 T 17-10-2018 FORC55_1315 cbf286f251665e9ebee0d12ca4c056d1 246 Pfam PF02146 Sir2 family 13 186 2.3E-50 T 17-10-2018 IPR003000 Sirtuin family GO:0070403 FORC55_1358 fa55478afb5f3647e684e2ff9793ad09 168 Gene3D G3DSA:3.40.50.300 1 164 2.7E-69 T 17-10-2018 FORC55_1358 fa55478afb5f3647e684e2ff9793ad09 168 ProSitePatterns PS00211 ABC transporters family signature. 60 74 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1358 fa55478afb5f3647e684e2ff9793ad09 168 Pfam PF00005 ABC transporter 2 88 8.3E-14 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1358 fa55478afb5f3647e684e2ff9793ad09 168 SUPERFAMILY SSF52540 1 158 1.18E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 SUPERFAMILY SSF53738 250 379 5.49E-30 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 SUPERFAMILY SSF55957 374 466 2.22E-19 T 17-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 Gene3D G3DSA:3.40.120.10 1 170 6.0E-47 T 17-10-2018 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 Gene3D G3DSA:3.40.120.10 263 370 8.7E-60 T 17-10-2018 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.6E-24 T 17-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 Gene3D G3DSA:3.30.310.50 383 469 7.4E-16 T 17-10-2018 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 135 3.7E-39 T 17-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 Gene3D G3DSA:3.40.120.10 171 365 8.7E-60 T 17-10-2018 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 SUPERFAMILY SSF53738 2 187 3.92E-40 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 465 1.7E-9 T 17-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_2210 90f2b8974ebee4af2e77ed44f18221c0 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 8.4E-26 T 17-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_1650 48018023c6cedd992732fcc01c29d5ec 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 8.8E-122 T 17-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 FORC55_1650 48018023c6cedd992732fcc01c29d5ec 346 SUPERFAMILY SSF53383 11 344 7.21E-75 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1650 48018023c6cedd992732fcc01c29d5ec 346 Pfam PF00155 Aminotransferase class I and II 42 339 2.4E-55 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_1650 48018023c6cedd992732fcc01c29d5ec 346 Gene3D G3DSA:3.90.1150.10 4 336 9.9E-123 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1650 48018023c6cedd992732fcc01c29d5ec 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.393 T 17-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 FORC55_1650 48018023c6cedd992732fcc01c29d5ec 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 17-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 FORC55_1650 48018023c6cedd992732fcc01c29d5ec 346 Gene3D G3DSA:3.40.640.10 49 253 9.9E-123 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3487 a6957d9d78c535ebfb6d2705550a211b 478 Gene3D G3DSA:3.30.450.20 137 218 3.1E-10 T 17-10-2018 FORC55_3487 a6957d9d78c535ebfb6d2705550a211b 478 Pfam PF02743 Cache domain 42 315 2.1E-16 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_3487 a6957d9d78c535ebfb6d2705550a211b 478 SUPERFAMILY SSF103190 172 229 4.63E-5 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily FORC55_3487 a6957d9d78c535ebfb6d2705550a211b 478 Gene3D G3DSA:3.30.450.20 219 341 1.0E-5 T 17-10-2018 FORC55_3295 9c74371ff516ac55691dde5e00248868 180 SUPERFAMILY SSF109854 17 164 1.16E-5 T 17-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes FORC55_3504 7a9a89267bca6d96747405477372ab63 313 Pfam PF01032 FecCD transport family 3 306 6.6E-89 T 17-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 FORC55_3504 7a9a89267bca6d96747405477372ab63 313 Gene3D G3DSA:1.10.3470.10 1 312 3.8E-101 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_3504 7a9a89267bca6d96747405477372ab63 313 SUPERFAMILY SSF81345 18 307 2.35E-81 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 1.7E-43 T 17-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 Gene3D G3DSA:2.170.190.11 53 145 1.3E-142 T 17-10-2018 FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 Gene3D G3DSA:3.40.980.10 179 331 1.3E-142 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 2.8E-25 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 SUPERFAMILY SSF63882 7 180 9.94E-55 T 17-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 6.3E-32 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 8.1E-22 T 17-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 Gene3D G3DSA:3.90.105.10 31 178 1.3E-142 T 17-10-2018 FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 17-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 Gene3D G3DSA:2.40.340.10 332 401 1.3E-142 T 17-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 SMART SM00852 184 321 1.9E-41 T 17-10-2018 IPR001453 MoaB/Mog domain FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 SUPERFAMILY SSF63867 332 410 4.19E-23 T 17-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 FORC55_3261 7679a0f1be0fd09a0816360076c3a3ac 411 SUPERFAMILY SSF53218 181 325 6.67E-42 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 Pfam PF01966 HD domain 451 584 4.5E-14 T 17-10-2018 IPR006674 HD domain FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 SMART SM00471 447 594 1.3E-10 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 SUPERFAMILY SSF55021 689 762 3.02E-7 T 17-10-2018 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 869 0.0 T 17-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 876 335.267 T 17-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 1.3E-34 T 17-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 SUPERFAMILY SSF55021 796 854 1.03E-7 T 17-10-2018 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 SUPERFAMILY SSF81593 182 310 1.02E-9 T 17-10-2018 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 SUPERFAMILY SSF109604 418 553 1.1E-14 T 17-10-2018 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 Gene3D G3DSA:1.10.3210.10 435 584 1.4E-9 T 17-10-2018 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 SUPERFAMILY SSF81301 38 172 1.19E-18 T 17-10-2018 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 Pfam PF01909 Nucleotidyltransferase domain 57 109 1.1E-7 T 17-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 FORC55_0599 dac030fbf5570d3fea9cc0874ac9f8f5 876 PIRSF PIRSF006288 6 875 0.0 T 17-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 FORC55_2964 8099bafb5bd7a44dd891feb8d671a0ae 355 SUPERFAMILY SSF56281 35 291 1.18E-26 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2964 8099bafb5bd7a44dd891feb8d671a0ae 355 Gene3D G3DSA:3.60.15.10 3 355 1.5E-111 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2964 8099bafb5bd7a44dd891feb8d671a0ae 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 5.0E-13 T 17-10-2018 FORC55_0228 d113ca8133d983778801baea670bbed6 188 SMART SM00841 131 186 9.2E-31 T 17-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 FORC55_0228 d113ca8133d983778801baea670bbed6 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.3E-25 T 17-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 FORC55_0228 d113ca8133d983778801baea670bbed6 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 4.8E-25 T 17-10-2018 IPR013185 Translation elongation factor, KOW-like FORC55_0228 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.30.30.30 1 64 3.1E-26 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 FORC55_0228 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.40.50.140 130 188 4.1E-27 T 17-10-2018 FORC55_0228 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50104 2 64 2.31E-20 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily FORC55_0228 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50249 130 187 3.6E-18 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0228 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50249 70 128 1.8E-16 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0228 d113ca8133d983778801baea670bbed6 188 SMART SM01185 69 123 2.6E-24 T 17-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 FORC55_0228 d113ca8133d983778801baea670bbed6 188 PIRSF PIRSF005901 2 188 1.9E-63 T 17-10-2018 IPR020599 Translation elongation factor P/YeiP FORC55_0228 d113ca8133d983778801baea670bbed6 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.8E-21 T 17-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 FORC55_0228 d113ca8133d983778801baea670bbed6 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.0E-76 T 17-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 FORC55_0228 d113ca8133d983778801baea670bbed6 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 17-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site FORC55_0228 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.40.50.140 66 129 2.7E-28 T 17-10-2018 FORC55_0228 d113ca8133d983778801baea670bbed6 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.037 T 17-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 FORC55_1410 449110ad67dcf3fff5bc3011a6e3a14a 468 SUPERFAMILY SSF51556 85 383 6.41E-81 T 17-10-2018 IPR032466 Metal-dependent hydrolase FORC55_1410 449110ad67dcf3fff5bc3011a6e3a14a 468 SUPERFAMILY SSF51338 28 454 3.31E-35 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 FORC55_1410 449110ad67dcf3fff5bc3011a6e3a14a 468 Gene3D G3DSA:3.20.20.140 86 375 3.1E-145 T 17-10-2018 FORC55_1410 449110ad67dcf3fff5bc3011a6e3a14a 468 Gene3D G3DSA:2.30.40.10 36 449 3.1E-145 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 FORC55_1410 449110ad67dcf3fff5bc3011a6e3a14a 468 Pfam PF01979 Amidohydrolase family 82 431 1.2E-67 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 Gene3D G3DSA:3.30.830.10 274 470 7.2E-34 T 17-10-2018 FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 SUPERFAMILY SSF63411 281 464 4.83E-31 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 Pfam PF05193 Peptidase M16 inactive domain 686 856 1.7E-25 T 17-10-2018 IPR007863 Peptidase M16, C-terminal FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 Pfam PF05193 Peptidase M16 inactive domain 219 394 3.0E-29 T 17-10-2018 IPR007863 Peptidase M16, C-terminal FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 SUPERFAMILY SSF63411 520 721 7.17E-42 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 SUPERFAMILY SSF63411 737 942 7.65E-39 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 Pfam PF00675 Insulinase (Peptidase family M16) 63 179 5.9E-18 T 17-10-2018 IPR011765 Peptidase M16, N-terminal FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 Pfam PF00675 Insulinase (Peptidase family M16) 539 653 3.7E-10 T 17-10-2018 IPR011765 Peptidase M16, N-terminal FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 Gene3D G3DSA:3.30.830.10 739 935 7.6E-37 T 17-10-2018 FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 SUPERFAMILY SSF63411 49 258 8.67E-55 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 Gene3D G3DSA:3.30.830.10 526 730 4.6E-41 T 17-10-2018 FORC55_2261 dca0ee4d751306392fc58e74be42b6cd 951 Gene3D G3DSA:3.30.830.10 47 268 7.1E-66 T 17-10-2018 FORC55_3635 b363bfd8999826ffb8abc5a0a628a95d 296 SUPERFAMILY SSF46785 4 84 1.85E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3635 b363bfd8999826ffb8abc5a0a628a95d 296 Gene3D G3DSA:1.10.10.10 3 89 6.1E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3635 b363bfd8999826ffb8abc5a0a628a95d 296 Pfam PF03466 LysR substrate binding domain 88 289 5.4E-42 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3635 b363bfd8999826ffb8abc5a0a628a95d 296 SUPERFAMILY SSF53850 90 292 2.35E-43 T 17-10-2018 FORC55_3635 b363bfd8999826ffb8abc5a0a628a95d 296 Gene3D G3DSA:3.40.190.290 92 289 5.5E-59 T 17-10-2018 FORC55_3635 b363bfd8999826ffb8abc5a0a628a95d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3428 69bbbf7d21e846c1f8ad586f38559341 223 Pfam PF01575 MaoC like domain 79 198 1.9E-20 T 17-10-2018 IPR002539 MaoC-like dehydratase domain FORC55_3428 69bbbf7d21e846c1f8ad586f38559341 223 Gene3D G3DSA:3.10.129.10 73 221 5.0E-35 T 17-10-2018 FORC55_3428 69bbbf7d21e846c1f8ad586f38559341 223 SUPERFAMILY SSF54637 75 216 7.88E-29 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_0731 57d6d51bc42c5ed1639cb4bffeb284cd 330 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 1 307 1.0E-119 T 17-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 FORC55_0731 57d6d51bc42c5ed1639cb4bffeb284cd 330 SUPERFAMILY SSF160544 204 309 2.22E-38 T 17-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal FORC55_0731 57d6d51bc42c5ed1639cb4bffeb284cd 330 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 162 180 4.2E-28 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 FORC55_0731 57d6d51bc42c5ed1639cb4bffeb284cd 330 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 182 199 4.2E-28 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 FORC55_0731 57d6d51bc42c5ed1639cb4bffeb284cd 330 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 241 4.2E-28 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 FORC55_0731 57d6d51bc42c5ed1639cb4bffeb284cd 330 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 256 277 4.2E-28 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 FORC55_0731 57d6d51bc42c5ed1639cb4bffeb284cd 330 Pfam PF01312 FlhB HrpN YscU SpaS Family 2 301 5.9E-101 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 FORC55_0731 57d6d51bc42c5ed1639cb4bffeb284cd 330 Gene3D G3DSA:3.40.1690.10 172 313 8.0E-56 T 17-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 SUPERFAMILY SSF143800 1 68 6.67E-27 T 17-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.084 T 17-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 Pfam PF01197 Ribosomal protein L31 1 66 9.6E-31 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 Gene3D G3DSA:2.30.170.50 1 71 1.4E-31 T 17-10-2018 FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.0E-34 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.8E-22 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.8E-22 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0210 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.8E-22 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_3369 151d6f83ab1c77c3cd7bf7b5539cec88 364 Gene3D G3DSA:3.40.50.2300 180 358 1.1E-141 T 17-10-2018 FORC55_3369 151d6f83ab1c77c3cd7bf7b5539cec88 364 Pfam PF13407 Periplasmic binding protein domain 69 323 4.9E-16 T 17-10-2018 IPR025997 Periplasmic binding protein FORC55_3369 151d6f83ab1c77c3cd7bf7b5539cec88 364 SUPERFAMILY SSF53822 27 363 1.52E-81 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_3369 151d6f83ab1c77c3cd7bf7b5539cec88 364 Gene3D G3DSA:3.40.50.2300 33 362 1.1E-141 T 17-10-2018 FORC55_3393 3e47e0fd3b249e88dd5a7d3d1cc855d0 481 SUPERFAMILY SSF53300 318 474 7.97E-26 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_3393 3e47e0fd3b249e88dd5a7d3d1cc855d0 481 Pfam PF05762 VWA domain containing CoxE-like protein 317 448 2.6E-9 T 17-10-2018 IPR008912 Uncharacterised protein family CoxE-like FORC55_3393 3e47e0fd3b249e88dd5a7d3d1cc855d0 481 Gene3D G3DSA:3.40.50.410 322 465 5.4E-7 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_3393 3e47e0fd3b249e88dd5a7d3d1cc855d0 481 SMART SM00327 320 479 0.001 T 17-10-2018 IPR002035 von Willebrand factor, type A FORC55_1206 ab360307760c33acfafe395daf509565 223 SUPERFAMILY SSF52540 1 218 1.03E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1206 ab360307760c33acfafe395daf509565 223 SMART SM00382 30 218 5.5E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1206 ab360307760c33acfafe395daf509565 223 Gene3D G3DSA:3.40.50.300 1 223 2.2E-58 T 17-10-2018 FORC55_1206 ab360307760c33acfafe395daf509565 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1206 ab360307760c33acfafe395daf509565 223 Pfam PF00005 ABC transporter 21 167 5.6E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 Gene3D G3DSA:2.40.50.100 1 79 2.4E-23 T 17-10-2018 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 402 2.7E-82 T 17-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 Gene3D G3DSA:3.30.559.10 172 404 9.5E-99 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 Gene3D G3DSA:4.10.320.10 102 151 2.9E-22 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 Pfam PF02817 e3 binding domain 113 146 1.0E-12 T 17-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 SUPERFAMILY SSF52777 174 403 4.31E-91 T 17-10-2018 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 Pfam PF00364 Biotin-requiring enzyme 4 76 4.2E-19 T 17-10-2018 IPR000089 Biotin/lipoyl attachment FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 SUPERFAMILY SSF47005 107 149 1.23E-11 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 404 1.2E-184 T 17-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 FORC55_0761 3683b330fdc56bc543b5b8945b78f894 404 SUPERFAMILY SSF51230 1 94 2.36E-25 T 17-10-2018 IPR011053 Single hybrid motif FORC55_1654 041c3cd5e88a9f9cce740527ae715c12 135 Gene3D G3DSA:4.10.430.10 92 135 2.7E-24 T 17-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 FORC55_1654 041c3cd5e88a9f9cce740527ae715c12 135 PIRSF PIRSF002096 1 135 1.2E-55 T 17-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 FORC55_1654 041c3cd5e88a9f9cce740527ae715c12 135 Gene3D G3DSA:1.10.287.1050 1 83 2.2E-29 T 17-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 FORC55_1654 041c3cd5e88a9f9cce740527ae715c12 135 SMART SM00528 88 135 6.9E-25 T 17-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 FORC55_1654 041c3cd5e88a9f9cce740527ae715c12 135 SUPERFAMILY SSF81273 2 58 8.83E-17 T 17-10-2018 FORC55_1654 041c3cd5e88a9f9cce740527ae715c12 135 Pfam PF00816 H-NS histone family 33 129 3.6E-20 T 17-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 FORC55_1654 041c3cd5e88a9f9cce740527ae715c12 135 SUPERFAMILY SSF81273 93 134 6.67E-12 T 17-10-2018 FORC55_1324 346b29bf7af9c9c4d2e6d431487d0756 598 Pfam PF00005 ABC transporter 376 524 6.1E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1324 346b29bf7af9c9c4d2e6d431487d0756 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1324 346b29bf7af9c9c4d2e6d431487d0756 598 SUPERFAMILY SSF52540 354 592 1.25E-81 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1324 346b29bf7af9c9c4d2e6d431487d0756 598 Gene3D G3DSA:1.20.1560.10 11 340 1.3E-55 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1324 346b29bf7af9c9c4d2e6d431487d0756 598 SUPERFAMILY SSF90123 12 345 1.02E-56 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_1324 346b29bf7af9c9c4d2e6d431487d0756 598 SMART SM00382 385 568 6.1E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1324 346b29bf7af9c9c4d2e6d431487d0756 598 Gene3D G3DSA:3.40.50.300 357 598 9.9E-82 T 17-10-2018 FORC55_1324 346b29bf7af9c9c4d2e6d431487d0756 598 Pfam PF00664 ABC transporter transmembrane region 26 312 6.2E-31 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 SUPERFAMILY SSF53092 7 130 4.53E-12 T 17-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 Gene3D G3DSA:3.40.350.10 2 146 7.3E-37 T 17-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 Gene3D G3DSA:3.40.350.10 147 291 1.5E-24 T 17-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 135 5.5E-16 T 17-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 Pfam PF00557 Metallopeptidase family M24 309 525 7.3E-48 T 17-10-2018 IPR000994 Peptidase M24 FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 SUPERFAMILY SSF55920 303 559 1.7E-59 T 17-10-2018 IPR036005 Creatinase/aminopeptidase-like FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 Gene3D G3DSA:3.90.230.10 300 594 8.3E-100 T 17-10-2018 FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 Pfam PF16188 C-terminal region of peptidase_M24 534 594 1.9E-22 T 17-10-2018 IPR032416 Peptidase M24, C-terminal domain FORC55_0052 7560c0425657e185f94e3b98853a8f31 597 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 8.1E-34 T 17-10-2018 FORC55_1075 571badc05b25fdc8fcd5779a3bf29f94 369 Pfam PF09397 Ftsk gamma domain 310 369 2.8E-20 T 17-10-2018 IPR018541 FtsK gamma domain FORC55_1075 571badc05b25fdc8fcd5779a3bf29f94 369 SMART SM00843 307 369 4.0E-16 T 17-10-2018 IPR018541 FtsK gamma domain FORC55_1075 571badc05b25fdc8fcd5779a3bf29f94 369 Pfam PF04381 Putative exonuclease, RdgC 1 298 3.2E-98 T 17-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 FORC55_1075 571badc05b25fdc8fcd5779a3bf29f94 369 SUPERFAMILY SSF46785 308 369 2.31E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1075 571badc05b25fdc8fcd5779a3bf29f94 369 Gene3D G3DSA:1.10.10.10 300 368 1.5E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 Gene3D G3DSA:1.20.120.530 97 236 2.4E-29 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.5E-25 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 SUPERFAMILY SSF48008 97 235 2.88E-21 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 Gene3D G3DSA:1.10.10.10 1 74 4.5E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 SUPERFAMILY SSF46785 5 77 5.73E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 SMART SM00895 99 227 5.4E-20 T 17-10-2018 IPR011711 GntR, C-terminal FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 Pfam PF07729 FCD domain 99 226 4.5E-20 T 17-10-2018 IPR011711 GntR, C-terminal FORC55_0460 039969d462b2b2122f96c7cfa93667e2 256 SMART SM00345 15 74 2.8E-27 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_2059 3afbd957e4938b3cf81e06e66f8f55f8 296 SUPERFAMILY SSF53850 90 288 4.07E-22 T 17-10-2018 FORC55_2059 3afbd957e4938b3cf81e06e66f8f55f8 296 Gene3D G3DSA:1.10.10.10 3 93 4.0E-18 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2059 3afbd957e4938b3cf81e06e66f8f55f8 296 Pfam PF03466 LysR substrate binding domain 97 288 2.5E-10 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2059 3afbd957e4938b3cf81e06e66f8f55f8 296 SUPERFAMILY SSF46785 2 85 2.83E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2059 3afbd957e4938b3cf81e06e66f8f55f8 296 Gene3D G3DSA:3.40.190.10 169 265 1.3E-7 T 17-10-2018 FORC55_2059 3afbd957e4938b3cf81e06e66f8f55f8 296 Gene3D G3DSA:3.40.190.10 100 168 1.3E-7 T 17-10-2018 FORC55_2059 3afbd957e4938b3cf81e06e66f8f55f8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-15 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0054 09e1cc77b0c7df4af8fa92b23a59c243 396 Gene3D G3DSA:1.20.1720.10 10 384 1.3E-88 T 17-10-2018 FORC55_0054 09e1cc77b0c7df4af8fa92b23a59c243 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 374 1.1E-66 T 17-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 FORC55_0054 09e1cc77b0c7df4af8fa92b23a59c243 396 SUPERFAMILY SSF103473 8 382 6.28E-57 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_0054 09e1cc77b0c7df4af8fa92b23a59c243 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 FORC55_0054 09e1cc77b0c7df4af8fa92b23a59c243 396 Pfam PF07690 Major Facilitator Superfamily 14 351 1.3E-43 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_2620 43179371714ce7019f86884965f6957a 451 SUPERFAMILY SSF51905 1 361 3.76E-57 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2620 43179371714ce7019f86884965f6957a 451 PIRSF PIRSF000350 1 445 6.3E-82 T 17-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 FORC55_2620 43179371714ce7019f86884965f6957a 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 17-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.8E-28 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.8E-28 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.8E-28 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.8E-28 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.8E-28 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 Gene3D G3DSA:3.50.50.60 5 315 1.5E-123 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2620 43179371714ce7019f86884965f6957a 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 2.1E-69 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_2620 43179371714ce7019f86884965f6957a 451 Gene3D G3DSA:3.50.50.60 144 261 1.5E-123 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.1E-64 T 17-10-2018 FORC55_2620 43179371714ce7019f86884965f6957a 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 8.0E-33 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 FORC55_2620 43179371714ce7019f86884965f6957a 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.4E-215 T 17-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 FORC55_2620 43179371714ce7019f86884965f6957a 451 SUPERFAMILY SSF55424 337 451 1.19E-34 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_2620 43179371714ce7019f86884965f6957a 451 Gene3D G3DSA:3.30.390.30 339 451 7.6E-47 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 PRINTS PR01021 OMPA domain signature 257 273 5.5E-15 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 PRINTS PR01021 OMPA domain signature 212 234 5.5E-15 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 PRINTS PR01021 OMPA domain signature 242 257 5.5E-15 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 Pfam PF00691 OmpA family 211 306 1.8E-26 T 17-10-2018 IPR006665 OmpA-like domain FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 ProSitePatterns PS01068 OmpA-like domain. 244 288 - T 17-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 SUPERFAMILY SSF103088 184 312 2.35E-40 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 SUPERFAMILY SSF56925 19 172 1.62E-30 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 Pfam PF01389 OmpA-like transmembrane domain 20 172 2.2E-43 T 17-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 Gene3D G3DSA:3.30.1330.60 189 318 4.8E-47 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_0643 b9e29c25a4779a51e3c322e27b31aea3 321 Gene3D G3DSA:2.40.160.20 5 188 1.9E-43 T 17-10-2018 FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 3.3E-4 T 17-10-2018 FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.7E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.7E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.7E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.7E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 SUPERFAMILY SSF51735 1 261 4.98E-53 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 Pfam PF00106 short chain dehydrogenase 7 198 5.9E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3681 40bbfe3ec76d80dc4adeafb5b3668630 265 Gene3D G3DSA:3.40.50.720 1 262 1.4E-52 T 17-10-2018 FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 SUPERFAMILY SSF46785 1 86 1.49E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 SUPERFAMILY SSF53850 89 290 1.85E-35 T 17-10-2018 FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.8E-21 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 Gene3D G3DSA:3.40.190.290 93 291 1.7E-44 T 17-10-2018 FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 Gene3D G3DSA:1.10.10.10 1 92 1.8E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0745 dc9f34e39fe8635529564cf5e2750d02 292 Pfam PF03466 LysR substrate binding domain 87 290 3.2E-42 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_1536 c6824296ceea74f835bb8b23e5192c7b 245 Pfam PF13489 Methyltransferase domain 62 206 4.5E-26 T 17-10-2018 FORC55_1536 c6824296ceea74f835bb8b23e5192c7b 245 Gene3D G3DSA:3.40.50.150 21 244 1.6E-76 T 17-10-2018 FORC55_1536 c6824296ceea74f835bb8b23e5192c7b 245 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 21 245 37.173 T 17-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 FORC55_1536 c6824296ceea74f835bb8b23e5192c7b 245 SUPERFAMILY SSF53335 25 225 4.66E-45 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1536 c6824296ceea74f835bb8b23e5192c7b 245 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 21 239 1.2E-87 T 17-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 Gene3D G3DSA:1.10.287.130 171 281 7.7E-23 T 17-10-2018 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 SMART SM00304 173 225 2.7E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 SMART SM00387 325 435 3.2E-30 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 433 8.1E-21 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 SMART SM00388 226 286 3.4E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 Pfam PF00672 HAMP domain 173 221 4.4E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 SUPERFAMILY SSF47384 220 281 6.47E-12 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 280 9.1E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 1.4E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 1.4E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.4E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 Gene3D G3DSA:3.30.565.10 288 438 1.2E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0178 15b1414e0e93355d4ae5d6f73d1ffd3a 438 SUPERFAMILY SSF55874 289 434 4.19E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0519 c71b0ff35eef7dd24a8a7b51956e5f06 418 Pfam PF07670 Nucleoside recognition 99 195 1.1E-7 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 FORC55_0519 c71b0ff35eef7dd24a8a7b51956e5f06 418 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 415 3.2E-152 T 17-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 FORC55_0519 c71b0ff35eef7dd24a8a7b51956e5f06 418 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.3E-26 T 17-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 FORC55_0519 c71b0ff35eef7dd24a8a7b51956e5f06 418 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 415 7.1E-75 T 17-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 Gene3D G3DSA:1.10.10.10 4 55 1.2E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 3.4E-21 T 17-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 SMART SM00344 3 112 6.3E-45 T 17-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 SUPERFAMILY SSF54909 63 152 3.22E-21 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.4E-12 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.4E-12 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.4E-12 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 17-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 Gene3D G3DSA:3.30.70.920 56 140 1.4E-23 T 17-10-2018 FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 SUPERFAMILY SSF46785 2 61 1.26E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1719 98f07149b923cb185952efc9c027ea6c 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 9.7E-17 T 17-10-2018 FORC55_3507 10adc48d0182f6732ed27316dab29e1f 100 Pfam PF04175 Protein of unknown function (DUF406) 8 96 1.3E-28 T 17-10-2018 IPR005272 Conserved hypothetical protein CHP00743 FORC55_3507 10adc48d0182f6732ed27316dab29e1f 100 Gene3D G3DSA:3.30.70.860 1 100 3.7E-45 T 17-10-2018 IPR035571 UPF0234-like, C-terminal FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 Gene3D G3DSA:3.40.190.10 11 220 3.6E-36 T 17-10-2018 FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 226 4.2E-25 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 Gene3D G3DSA:3.40.190.10 253 464 6.3E-22 T 17-10-2018 FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 Gene3D G3DSA:3.40.190.10 106 196 3.6E-36 T 17-10-2018 FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 Gene3D G3DSA:3.40.190.10 341 428 6.3E-22 T 17-10-2018 FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 SMART SM00062 20 240 7.3E-16 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 259 464 8.2E-10 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 SMART SM00918 266 311 3.2E-4 T 17-10-2018 IPR019594 Ionotropic glutamate receptor, L-glutamate and glycine-binding domain GO:0004970|GO:0016020 FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 SUPERFAMILY SSF53850 25 223 2.38E-30 T 17-10-2018 FORC55_1185 2ebeea052ec9d29dddf5c7490abfd665 519 SUPERFAMILY SSF53850 256 466 3.33E-17 T 17-10-2018 FORC55_3171 55f3c4ec949a1fd8d39d95ebc85eb5e1 265 Gene3D G3DSA:3.20.20.450 14 264 1.1E-39 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_3171 55f3c4ec949a1fd8d39d95ebc85eb5e1 265 SMART SM00052 22 257 1.9E-10 T 17-10-2018 IPR001633 EAL domain FORC55_3171 55f3c4ec949a1fd8d39d95ebc85eb5e1 265 Pfam PF00563 EAL domain 29 252 3.9E-37 T 17-10-2018 IPR001633 EAL domain FORC55_3171 55f3c4ec949a1fd8d39d95ebc85eb5e1 265 SUPERFAMILY SSF141868 30 258 1.57E-41 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 17-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2294 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 17-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0960 e456040cb734d5c1283ee4d74cef96ac 516 Pfam PF04293 SpoVR like protein 24 453 6.0E-176 T 17-10-2018 IPR007390 Sporulation stage V, protein R FORC55_2353 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 17-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2353 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 17-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2353 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 17-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2353 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 17-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2353 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 17-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2045 e5a7f67ec96c0237b82e6d9c0154eaf7 330 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 286 4.7E-81 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 FORC55_2045 e5a7f67ec96c0237b82e6d9c0154eaf7 330 SUPERFAMILY SSF51445 2 289 3.16E-87 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_2045 e5a7f67ec96c0237b82e6d9c0154eaf7 330 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 228 245 - T 17-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 FORC55_2045 e5a7f67ec96c0237b82e6d9c0154eaf7 330 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 326 46.496 T 17-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 FORC55_2045 e5a7f67ec96c0237b82e6d9c0154eaf7 330 Gene3D G3DSA:3.20.20.300 1 330 5.5E-137 T 17-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:2.40.420.20 325 414 3.9E-22 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:1.10.287.470 185 195 1.8E-26 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:2.40.50.100 196 245 1.8E-26 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:2.40.50.320 494 565 6.0E-13 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:2.40.50.320 415 485 8.6E-22 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:1.10.287.470 162 174 6.4E-10 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 SUPERFAMILY SSF111369 131 323 6.41E-16 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:2.40.420.20 101 112 6.4E-10 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:2.40.30.170 113 126 6.4E-10 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 318 1.1E-77 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Pfam PF11604 Copper binding periplasmic protein CusF 418 484 6.2E-24 T 17-10-2018 IPR021647 Copper binding periplasmic protein CusF FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Pfam PF11604 Copper binding periplasmic protein CusF 498 563 1.2E-15 T 17-10-2018 IPR021647 Copper binding periplasmic protein CusF FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:2.40.50.100 127 161 6.4E-10 T 17-10-2018 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 214 391 1.7E-31 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_2973 dbf270311666b3c0a18aee576f110a9c 569 Gene3D G3DSA:2.40.30.170 246 319 1.8E-26 T 17-10-2018 FORC55_0854 14f4b5957b9fd30e3d3c17ff65b74af8 185 PIRSF PIRSF004982 2 185 1.5E-70 T 17-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 FORC55_0854 14f4b5957b9fd30e3d3c17ff65b74af8 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 168 3.3E-44 T 17-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 FORC55_0854 14f4b5957b9fd30e3d3c17ff65b74af8 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 7 159 1.7E-31 T 17-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 FORC55_0092 c91890c929d7e9d2bac673e94198026b 212 Gene3D G3DSA:3.40.50.150 2 110 8.8E-6 T 17-10-2018 FORC55_0092 c91890c929d7e9d2bac673e94198026b 212 Gene3D G3DSA:3.40.50.150 113 204 3.4E-9 T 17-10-2018 FORC55_0092 c91890c929d7e9d2bac673e94198026b 212 Pfam PF13489 Methyltransferase domain 62 197 4.8E-20 T 17-10-2018 FORC55_0092 c91890c929d7e9d2bac673e94198026b 212 SUPERFAMILY SSF53335 46 198 1.3E-20 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_3250 d69ad2809a08094911198363c97dcbf7 277 SUPERFAMILY SSF161098 8 276 6.41E-66 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3250 d69ad2809a08094911198363c97dcbf7 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 262 2.1E-16 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3250 d69ad2809a08094911198363c97dcbf7 277 Gene3D G3DSA:1.10.3720.10 2 264 1.2E-59 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3208 2ceb56076225e87dddd961fb4a047c84 191 Gene3D G3DSA:3.30.70.1070 88 182 1.7E-22 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_3208 2ceb56076225e87dddd961fb4a047c84 191 SUPERFAMILY SSF110997 99 162 1.7E-7 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_3208 2ceb56076225e87dddd961fb4a047c84 191 Pfam PF05036 Sporulation related domain 100 174 3.3E-13 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 FORC55_3179 02274b44df8e811811ec3fcbfa27b545 543 SUPERFAMILY SSF52540 1 326 4.58E-18 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3179 02274b44df8e811811ec3fcbfa27b545 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 1.7E-151 T 17-10-2018 IPR022602 Protein of unknown function DUF2813 FORC55_3179 02274b44df8e811811ec3fcbfa27b545 543 Gene3D G3DSA:3.40.50.300 1 339 1.5E-17 T 17-10-2018 FORC55_2970 df4edc78d5c6cfdb12410c1d2d92a248 196 Gene3D G3DSA:2.60.120.10 13 132 4.0E-20 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_2970 df4edc78d5c6cfdb12410c1d2d92a248 196 SUPERFAMILY SSF51182 9 117 3.67E-15 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_2970 df4edc78d5c6cfdb12410c1d2d92a248 196 Pfam PF07883 Cupin domain 48 104 3.9E-11 T 17-10-2018 IPR013096 Cupin 2, conserved barrel FORC55_0988 63d0d45ba8c2b7f357785691c29fc9e2 164 PIRSF PIRSF001467 1 163 9.6E-28 T 17-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 FORC55_0988 63d0d45ba8c2b7f357785691c29fc9e2 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 17-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 FORC55_0988 63d0d45ba8c2b7f357785691c29fc9e2 164 Gene3D G3DSA:2.40.100.10 1 164 8.0E-64 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily FORC55_0988 63d0d45ba8c2b7f357785691c29fc9e2 164 SUPERFAMILY SSF50891 1 162 4.24E-58 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily FORC55_0988 63d0d45ba8c2b7f357785691c29fc9e2 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 1.9E-47 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 FORC55_0988 63d0d45ba8c2b7f357785691c29fc9e2 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.8E-11 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 FORC55_0988 63d0d45ba8c2b7f357785691c29fc9e2 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.8E-11 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 FORC55_0988 63d0d45ba8c2b7f357785691c29fc9e2 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.8E-11 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 FORC55_3655 fd0f5a94338ebea81e6f3cae764e9915 211 Gene3D G3DSA:2.30.110.10 13 211 2.0E-77 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 FORC55_3655 fd0f5a94338ebea81e6f3cae764e9915 211 SUPERFAMILY SSF50475 14 211 1.87E-65 T 17-10-2018 FORC55_3655 fd0f5a94338ebea81e6f3cae764e9915 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 3.4E-20 T 17-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 FORC55_3655 fd0f5a94338ebea81e6f3cae764e9915 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 6.4E-23 T 17-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 FORC55_3655 fd0f5a94338ebea81e6f3cae764e9915 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 17-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 FORC55_3655 fd0f5a94338ebea81e6f3cae764e9915 211 PIRSF PIRSF000190 1 211 1.2E-79 T 17-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 FORC55_3655 fd0f5a94338ebea81e6f3cae764e9915 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 8.2E-89 T 17-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 FORC55_3655 fd0f5a94338ebea81e6f3cae764e9915 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.454 T 17-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 FORC55_3614 969d26d69a72562f1b1b1cc9e61a46cb 239 SUPERFAMILY SSF52540 3 232 2.66E-78 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3614 969d26d69a72562f1b1b1cc9e61a46cb 239 SMART SM00382 28 210 2.2E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3614 969d26d69a72562f1b1b1cc9e61a46cb 239 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3614 969d26d69a72562f1b1b1cc9e61a46cb 239 Gene3D G3DSA:3.40.50.300 1 239 3.5E-79 T 17-10-2018 FORC55_3614 969d26d69a72562f1b1b1cc9e61a46cb 239 PIRSF PIRSF039085 1 238 2.0E-100 T 17-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 FORC55_3614 969d26d69a72562f1b1b1cc9e61a46cb 239 Pfam PF00005 ABC transporter 19 162 1.9E-36 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 PIRSF PIRSF039144 1 112 2.2E-56 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.1E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 17-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 17-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 Gene3D G3DSA:3.30.70.120 1 112 2.3E-47 T 17-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 SUPERFAMILY SSF54913 1 112 5.4E-46 T 17-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 52 75 7.1E-42 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 23 41 7.1E-42 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 83 103 7.1E-42 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 2 17 7.1E-42 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_2215 f0a5f4d07edca635e279700d6e82da6e 112 SMART SM00938 4 105 1.3E-69 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 FORC55_1920 0b15989c731297ad75828827c1d2fc48 295 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 4 285 8.0E-107 T 17-10-2018 IPR013398 CRISPR-associated protein Csy2 FORC55_1920 0b15989c731297ad75828827c1d2fc48 295 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 4 286 4.1E-72 T 17-10-2018 IPR013398 CRISPR-associated protein Csy2 FORC55_2260 87336dd94bb8de82e2ecb6826759e8bf 524 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 524 224.769 T 17-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 FORC55_2260 87336dd94bb8de82e2ecb6826759e8bf 524 Gene3D G3DSA:3.30.590.20 17 523 4.2E-195 T 17-10-2018 FORC55_2260 87336dd94bb8de82e2ecb6826759e8bf 524 Pfam PF04262 Glutamate-cysteine ligase 13 378 1.6E-168 T 17-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 FORC55_2260 87336dd94bb8de82e2ecb6826759e8bf 524 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 515 2.5E-217 T 17-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 FORC55_2260 87336dd94bb8de82e2ecb6826759e8bf 524 SUPERFAMILY SSF55931 8 513 1.57E-202 T 17-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 FORC55_1273 1ba251f906c7836fdfd6d733e91e1177 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 1.8E-37 T 17-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 FORC55_1273 1ba251f906c7836fdfd6d733e91e1177 236 SUPERFAMILY SSF51695 4 235 5.23E-68 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 FORC55_1273 1ba251f906c7836fdfd6d733e91e1177 236 Gene3D G3DSA:3.20.20.190 1 236 1.0E-68 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 FORC55_1646 a71896c51924e0d2492765af7170cc26 257 Gene3D G3DSA:3.20.20.70 1 257 1.6E-94 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1646 a71896c51924e0d2492765af7170cc26 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 7.0E-115 T 17-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 FORC55_1646 a71896c51924e0d2492765af7170cc26 257 Pfam PF00977 Histidine biosynthesis protein 5 239 6.7E-78 T 17-10-2018 IPR006062 Histidine biosynthesis GO:0000105 FORC55_1646 a71896c51924e0d2492765af7170cc26 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.614 T 17-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 FORC55_1646 a71896c51924e0d2492765af7170cc26 257 SUPERFAMILY SSF51366 1 256 6.59E-74 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 8.2E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 8.2E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 8.2E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.2E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 8.2E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 8.2E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 SUPERFAMILY SSF51735 4 223 2.89E-61 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 8.0E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 8.0E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 8.0E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 Gene3D G3DSA:3.40.50.720 1 239 3.5E-75 T 17-10-2018 FORC55_3637 f5707654f203198fe3943123a60cd5a7 239 Pfam PF00106 short chain dehydrogenase 5 187 5.8E-51 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1539 d9f734152899bd4e7c8911418e46cdab 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 74 4.1E-9 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 FORC55_1539 d9f734152899bd4e7c8911418e46cdab 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 FORC55_1539 d9f734152899bd4e7c8911418e46cdab 92 SUPERFAMILY SSF54292 8 82 2.1E-19 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 FORC55_1539 d9f734152899bd4e7c8911418e46cdab 92 Gene3D G3DSA:3.10.20.30 4 81 5.3E-16 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_1241 5be80685da51477d8ff95c171298605c 388 Pfam PF08544 GHMP kinases C terminal 280 362 2.1E-12 T 17-10-2018 IPR013750 GHMP kinase, C-terminal domain FORC55_1241 5be80685da51477d8ff95c171298605c 388 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 17-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 PRINTS PR00959 Mevalonate kinase family signature 26 50 7.2E-44 T 17-10-2018 FORC55_1241 5be80685da51477d8ff95c171298605c 388 PRINTS PR00959 Mevalonate kinase family signature 120 142 7.2E-44 T 17-10-2018 FORC55_1241 5be80685da51477d8ff95c171298605c 388 PRINTS PR00959 Mevalonate kinase family signature 329 346 7.2E-44 T 17-10-2018 FORC55_1241 5be80685da51477d8ff95c171298605c 388 PRINTS PR00959 Mevalonate kinase family signature 163 182 7.2E-44 T 17-10-2018 FORC55_1241 5be80685da51477d8ff95c171298605c 388 PRINTS PR00473 Galactokinase signature 113 131 3.9E-30 T 17-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 PRINTS PR00473 Galactokinase signature 28 46 3.9E-30 T 17-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 PRINTS PR00473 Galactokinase signature 93 104 3.9E-30 T 17-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 PRINTS PR00473 Galactokinase signature 264 278 3.9E-30 T 17-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 Hamap MF_00246 Galactokinase [galK]. 26 382 44.338 T 17-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 Pfam PF00288 GHMP kinases N terminal domain 115 182 6.0E-12 T 17-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 FORC55_1241 5be80685da51477d8ff95c171298605c 388 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 9.5E-148 T 17-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 17-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 FORC55_1241 5be80685da51477d8ff95c171298605c 388 Pfam PF10509 Galactokinase galactose-binding signature 11 59 3.6E-23 T 17-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 SUPERFAMILY SSF54211 2 203 2.13E-66 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_1241 5be80685da51477d8ff95c171298605c 388 Gene3D G3DSA:3.30.70.890 203 358 3.7E-133 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily FORC55_1241 5be80685da51477d8ff95c171298605c 388 Gene3D G3DSA:3.30.230.10 23 202 3.7E-133 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_1241 5be80685da51477d8ff95c171298605c 388 PIRSF PIRSF000530 1 385 1.1E-126 T 17-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 FORC55_1241 5be80685da51477d8ff95c171298605c 388 SUPERFAMILY SSF55060 206 382 3.52E-52 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily FORC55_1470 a367cb06095dbe00e5cb64d574eb97ca 324 Gene3D G3DSA:3.40.50.2300 132 276 2.5E-113 T 17-10-2018 FORC55_1470 a367cb06095dbe00e5cb64d574eb97ca 324 Gene3D G3DSA:3.40.50.2300 26 299 2.5E-113 T 17-10-2018 FORC55_1470 a367cb06095dbe00e5cb64d574eb97ca 324 Pfam PF13407 Periplasmic binding protein domain 26 296 6.2E-60 T 17-10-2018 IPR025997 Periplasmic binding protein FORC55_1470 a367cb06095dbe00e5cb64d574eb97ca 324 SUPERFAMILY SSF53822 23 323 1.7E-77 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Gene3D G3DSA:2.40.50.100 104 180 6.6E-20 T 17-10-2018 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Gene3D G3DSA:2.40.50.100 1 80 1.1E-20 T 17-10-2018 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Gene3D G3DSA:2.40.50.100 203 280 2.2E-20 T 17-10-2018 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 SUPERFAMILY SSF51230 1 92 5.5E-23 T 17-10-2018 IPR011053 Single hybrid motif FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 189 630 2.4E-206 T 17-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 126 155 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Pfam PF02817 e3 binding domain 323 357 6.5E-15 T 17-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 SUPERFAMILY SSF51230 202 294 1.19E-22 T 17-10-2018 IPR011053 Single hybrid motif FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 SUPERFAMILY SSF51230 103 194 2.22E-22 T 17-10-2018 IPR011053 Single hybrid motif FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 SUPERFAMILY SSF47005 316 361 8.11E-13 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Pfam PF00364 Biotin-requiring enzyme 104 174 8.2E-21 T 17-10-2018 IPR000089 Biotin/lipoyl attachment FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Pfam PF00364 Biotin-requiring enzyme 204 274 1.1E-20 T 17-10-2018 IPR000089 Biotin/lipoyl attachment FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Pfam PF00364 Biotin-requiring enzyme 4 73 5.4E-20 T 17-10-2018 IPR000089 Biotin/lipoyl attachment FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 SUPERFAMILY SSF52777 388 629 6.23E-83 T 17-10-2018 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Gene3D G3DSA:3.30.559.10 383 630 4.7E-98 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Gene3D G3DSA:4.10.320.10 323 367 1.8E-21 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 FORC55_0462 54bdeba3fc3cb05613acab9040bae26e 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 4.7E-81 T 17-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 FORC55_0304 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.0E-42 T 17-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0304 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Gene3D G3DSA:3.30.420.100 1 117 4.4E-43 T 17-10-2018 FORC55_0304 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.505 T 17-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0304 e2fa128cc17694ea2a1ebda4dc76d4e2 117 SUPERFAMILY SSF53137 3 115 7.41E-51 T 17-10-2018 FORC55_0304 e2fa128cc17694ea2a1ebda4dc76d4e2 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.3E-43 T 17-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_3262 899f28560fa2b5ee7317b89fb880bd46 253 Pfam PF00899 ThiF family 13 246 1.2E-65 T 17-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 FORC55_3262 899f28560fa2b5ee7317b89fb880bd46 253 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 249 9.7E-130 T 17-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 FORC55_3262 899f28560fa2b5ee7317b89fb880bd46 253 SUPERFAMILY SSF69572 5 251 6.67E-86 T 17-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 FORC55_3262 899f28560fa2b5ee7317b89fb880bd46 253 Gene3D G3DSA:3.40.50.720 5 253 1.9E-88 T 17-10-2018 FORC55_2355 fb02824312f555523dcea276babc5a1a 468 Pfam PF13520 Amino acid permease 5 411 3.8E-67 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 FORC55_2355 fb02824312f555523dcea276babc5a1a 468 Gene3D G3DSA:1.20.1740.10 1 456 3.6E-62 T 17-10-2018 FORC55_2355 fb02824312f555523dcea276babc5a1a 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 466 1.6E-160 T 17-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 FORC55_2355 fb02824312f555523dcea276babc5a1a 468 PIRSF PIRSF006060 1 468 9.0E-47 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 310 2.2E-25 T 17-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 SUPERFAMILY SSF53738 302 445 4.32E-31 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 491 547 1.2E-9 T 17-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 441 4.4E-17 T 17-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 181 7.9E-42 T 17-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 Gene3D G3DSA:3.40.120.10 31 187 8.3E-47 T 17-10-2018 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 SUPERFAMILY SSF53738 32 214 8.63E-43 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 Gene3D G3DSA:3.30.310.50 443 550 6.0E-7 T 17-10-2018 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 17-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 SUPERFAMILY SSF55957 463 551 1.22E-14 T 17-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 Gene3D G3DSA:3.40.120.10 204 322 9.2E-21 T 17-10-2018 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 3.2E-7 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 3.2E-7 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 3.2E-7 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 Gene3D G3DSA:3.40.120.10 323 442 1.0E-31 T 17-10-2018 FORC55_3618 3dca8c2d8bdc618b1b0bf29b2d56cf75 567 SUPERFAMILY SSF53738 204 312 7.85E-21 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 SUPERFAMILY SSF56042 826 1035 4.49E-56 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 SUPERFAMILY SSF109736 156 220 4.58E-21 T 17-10-2018 FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 966 6.5E-16 T 17-10-2018 IPR010918 PurM-like, C-terminal domain FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 5.5E-28 T 17-10-2018 IPR010918 PurM-like, C-terminal domain FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 SUPERFAMILY SSF55326 221 428 1.99E-64 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 17-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 SUPERFAMILY SSF55326 619 816 2.88E-69 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Gene3D G3DSA:1.10.8.750 153 213 2.0E-27 T 17-10-2018 FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Gene3D G3DSA:3.30.1330.10 616 809 5.6E-26 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Gene3D G3DSA:3.90.650.10 810 982 6.4E-31 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 SUPERFAMILY SSF56042 432 615 5.08E-53 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.379 T 17-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Gene3D G3DSA:3.90.650.10 420 606 2.4E-58 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 SUPERFAMILY SSF82697 1 151 3.19E-52 T 17-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Gene3D G3DSA:3.40.50.880 983 1297 3.9E-138 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1296 1.2E-107 T 17-10-2018 FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 SUPERFAMILY SSF52317 1037 1296 2.99E-99 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 SMART SM01211 1041 1296 1.0E-157 T 17-10-2018 FORC55_1897 7ad7389e57cc4297db1ab8d5249b714b 1297 Gene3D G3DSA:3.30.1330.10 214 419 2.0E-41 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily FORC55_1634 cf16c6965e60079435e4ce92ddb639a6 284 Pfam PF01380 SIS domain 124 252 4.4E-25 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_1634 cf16c6965e60079435e4ce92ddb639a6 284 SUPERFAMILY SSF53697 93 277 5.87E-40 T 17-10-2018 FORC55_1634 cf16c6965e60079435e4ce92ddb639a6 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 17-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 FORC55_1634 cf16c6965e60079435e4ce92ddb639a6 284 Gene3D G3DSA:3.40.50.10490 94 277 8.2E-40 T 17-10-2018 FORC55_1634 cf16c6965e60079435e4ce92ddb639a6 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1634 cf16c6965e60079435e4ce92ddb639a6 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0584 f5ce3634e8660efd89013d822547a013 430 PIRSF PIRSF005353 1 430 6.4E-188 T 17-10-2018 IPR026033 Purine permease PbuG-like FORC55_0584 f5ce3634e8660efd89013d822547a013 430 Pfam PF00860 Permease family 17 391 5.7E-56 T 17-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 FORC55_2264 9ffa67af949cbbf9eeb1eca7f8bd18a6 376 PIRSF PIRSF015658 1 376 7.0E-179 T 17-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 FORC55_2264 9ffa67af949cbbf9eeb1eca7f8bd18a6 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 4.2E-159 T 17-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 FORC55_2264 9ffa67af949cbbf9eeb1eca7f8bd18a6 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 20 370 2.2E-170 T 17-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 FORC55_0795 c7768717b07c5201974234fcdcdf03b3 158 Gene3D G3DSA:1.10.8.640 20 104 1.0E-36 T 17-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily FORC55_0795 c7768717b07c5201974234fcdcdf03b3 158 Pfam PF03918 Cytochrome C biogenesis protein 9 150 7.0E-57 T 17-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family FORC55_0159 8b350f1fd4338e76b4ecb83301a8dcff 336 SUPERFAMILY SSF158544 215 284 1.18E-19 T 17-10-2018 IPR038072 GspK, central domain superfamily FORC55_0159 8b350f1fd4338e76b4ecb83301a8dcff 336 SUPERFAMILY SSF54523 36 325 9.89E-38 T 17-10-2018 FORC55_0159 8b350f1fd4338e76b4ecb83301a8dcff 336 Gene3D G3DSA:1.10.40.60 216 285 8.6E-92 T 17-10-2018 IPR038072 GspK, central domain superfamily FORC55_0159 8b350f1fd4338e76b4ecb83301a8dcff 336 Gene3D G3DSA:3.30.1300.30 42 309 8.6E-92 T 17-10-2018 FORC55_0159 8b350f1fd4338e76b4ecb83301a8dcff 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 2.2E-89 T 17-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 FORC55_0159 8b350f1fd4338e76b4ecb83301a8dcff 336 Gene3D G3DSA:1.10.40.60 99 215 8.6E-92 T 17-10-2018 IPR038072 GspK, central domain superfamily FORC55_0159 8b350f1fd4338e76b4ecb83301a8dcff 336 PIRSF PIRSF002786 1 328 2.6E-63 T 17-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 FORC55_0159 8b350f1fd4338e76b4ecb83301a8dcff 336 SUPERFAMILY SSF158544 101 213 8.11E-29 T 17-10-2018 IPR038072 GspK, central domain superfamily FORC55_0740 82b310bfe92da5a369eb570d2daf5f28 403 Gene3D G3DSA:3.40.47.10 258 401 6.8E-53 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0740 82b310bfe92da5a369eb570d2daf5f28 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.3E-15 T 17-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain FORC55_0740 82b310bfe92da5a369eb570d2daf5f28 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 17-10-2018 IPR018201 Beta-ketoacyl synthase, active site FORC55_0740 82b310bfe92da5a369eb570d2daf5f28 403 SUPERFAMILY SSF53901 1 251 3.74E-67 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0740 82b310bfe92da5a369eb570d2daf5f28 403 Gene3D G3DSA:3.40.47.10 6 257 3.1E-70 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0740 82b310bfe92da5a369eb570d2daf5f28 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 3.3E-46 T 17-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal FORC55_0740 82b310bfe92da5a369eb570d2daf5f28 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 1.7E-28 T 17-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal FORC55_0740 82b310bfe92da5a369eb570d2daf5f28 403 SUPERFAMILY SSF53901 213 401 2.1E-62 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_0444 89ba40ef30593f32df296def6f743224 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 1.9E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0444 89ba40ef30593f32df296def6f743224 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.926 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 SUPERFAMILY SSF56719 388 619 6.02E-80 T 17-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 FORC55_0444 89ba40ef30593f32df296def6f743224 626 SMART SM00387 27 173 3.4E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0444 89ba40ef30593f32df296def6f743224 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 8.0E-28 T 17-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 SUPERFAMILY SSF54211 217 382 3.41E-46 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0444 89ba40ef30593f32df296def6f743224 626 Gene3D G3DSA:3.30.230.10 216 389 1.9E-56 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0444 89ba40ef30593f32df296def6f743224 626 Pfam PF01751 Toprim domain 413 522 2.7E-13 T 17-10-2018 IPR006171 TOPRIM domain FORC55_0444 89ba40ef30593f32df296def6f743224 626 SUPERFAMILY SSF55874 5 215 1.23E-66 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0444 89ba40ef30593f32df296def6f743224 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 Gene3D G3DSA:3.40.50.670 390 621 1.9E-94 T 17-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0444 89ba40ef30593f32df296def6f743224 626 Gene3D G3DSA:3.30.565.10 2 215 6.8E-75 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0444 89ba40ef30593f32df296def6f743224 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 17-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0444 89ba40ef30593f32df296def6f743224 626 SMART SM00433 34 622 7.0E-216 T 17-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.3E-127 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 FORC55_0444 89ba40ef30593f32df296def6f743224 626 Pfam PF00204 DNA gyrase B 218 384 1.4E-42 T 17-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.4E-58 T 17-10-2018 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.4E-58 T 17-10-2018 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.4E-58 T 17-10-2018 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.4E-58 T 17-10-2018 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.4E-58 T 17-10-2018 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.4E-58 T 17-10-2018 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.4E-58 T 17-10-2018 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.4E-58 T 17-10-2018 FORC55_0444 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.4E-58 T 17-10-2018 FORC55_1108 8df25020872c2c60ac087ae52f9817c9 331 TIGRFAM TIGR04387 capsid_maj_N4: major capsid protein, N4-gp56 family 4 328 2.3E-116 T 17-10-2018 FORC55_2468 896300f309d9aad924aa15a2358cc261 446 PIRSF PIRSF000850 1 446 5.6E-240 T 17-10-2018 FORC55_2468 896300f309d9aad924aa15a2358cc261 446 SUPERFAMILY SSF56024 7 185 1.39E-25 T 17-10-2018 FORC55_2468 896300f309d9aad924aa15a2358cc261 446 Gene3D G3DSA:3.30.870.10 18 225 1.7E-166 T 17-10-2018 FORC55_2468 896300f309d9aad924aa15a2358cc261 446 Pfam PF13091 PLD-like domain 251 402 2.6E-26 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 FORC55_2468 896300f309d9aad924aa15a2358cc261 446 SMART SM00155 126 152 0.0015 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 FORC55_2468 896300f309d9aad924aa15a2358cc261 446 SMART SM00155 347 374 0.011 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 FORC55_2468 896300f309d9aad924aa15a2358cc261 446 Gene3D G3DSA:3.30.870.10 12 442 1.7E-166 T 17-10-2018 FORC55_2468 896300f309d9aad924aa15a2358cc261 446 SUPERFAMILY SSF56024 245 407 1.73E-27 T 17-10-2018 FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 SUPERFAMILY SSF52540 302 526 9.59E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 Pfam PF12848 ABC transporter 230 306 3.2E-13 T 17-10-2018 IPR032781 ABC-transporter extension domain FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 Gene3D G3DSA:3.40.50.300 286 555 1.5E-78 T 17-10-2018 FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 3.2E-293 T 17-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 SMART SM00382 31 236 2.3E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 SMART SM00382 348 522 6.1E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 Gene3D G3DSA:3.40.50.300 1 285 7.3E-86 T 17-10-2018 FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 Pfam PF00005 ABC transporter 22 191 6.8E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 Pfam PF00005 ABC transporter 340 473 2.1E-25 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2039 cecf967a3b2de6dd1f8805938000d604 555 SUPERFAMILY SSF52540 9 243 1.65E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 Gene3D G3DSA:3.40.50.300 1 238 4.4E-75 T 17-10-2018 FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 Gene3D G3DSA:2.40.50.140 287 344 4.4E-53 T 17-10-2018 FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 Pfam PF00005 ABC transporter 20 161 1.1E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 Pfam PF08402 TOBE domain 281 353 1.5E-10 T 17-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 Gene3D G3DSA:2.40.50.100 239 361 4.4E-53 T 17-10-2018 FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 SUPERFAMILY SSF50331 236 364 5.35E-32 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 SMART SM00382 28 211 2.3E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3534 0a028769a46bfde074c14bb244fcc908 373 SUPERFAMILY SSF52540 4 244 1.95E-85 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0434 e7e0ee3093da8869bd00bb64d0562966 228 Gene3D G3DSA:1.20.58.220 2 227 1.9E-63 T 17-10-2018 IPR038078 PhoU-like domain superfamily FORC55_0434 e7e0ee3093da8869bd00bb64d0562966 228 SUPERFAMILY SSF109755 33 218 2.27E-15 T 17-10-2018 FORC55_0434 e7e0ee3093da8869bd00bb64d0562966 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 3.6E-68 T 17-10-2018 IPR002727 Protein of unknown function DUF47 FORC55_0434 e7e0ee3093da8869bd00bb64d0562966 228 Pfam PF01865 Protein of unknown function DUF47 9 225 1.8E-65 T 17-10-2018 IPR018445 Putative phosphate transport regulator FORC55_1573 d153f714b055f4147bcc49ea3f2fcaf4 673 Pfam PF02378 Phosphotransferase system, EIIC 5 307 5.9E-19 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_1573 d153f714b055f4147bcc49ea3f2fcaf4 673 Pfam PF00563 EAL domain 421 648 2.1E-61 T 17-10-2018 IPR001633 EAL domain FORC55_1573 d153f714b055f4147bcc49ea3f2fcaf4 673 Gene3D G3DSA:3.20.20.450 419 667 1.3E-67 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_1573 d153f714b055f4147bcc49ea3f2fcaf4 673 SUPERFAMILY SSF141868 423 664 1.09E-62 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_1573 d153f714b055f4147bcc49ea3f2fcaf4 673 SMART SM00052 414 654 1.4E-65 T 17-10-2018 IPR001633 EAL domain FORC55_2437 2aa8931a8d9ed84a652892bae41ba8e1 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 17-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 FORC55_2437 2aa8931a8d9ed84a652892bae41ba8e1 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 17-10-2018 FORC55_2437 2aa8931a8d9ed84a652892bae41ba8e1 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 17-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 FORC55_2437 2aa8931a8d9ed84a652892bae41ba8e1 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 17-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 FORC55_2437 2aa8931a8d9ed84a652892bae41ba8e1 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 17-10-2018 IPR010920 LSM domain superfamily FORC55_2638 28d0587cf50004deb57cffa5ecc9ddb8 465 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 64 448 1.2E-118 T 17-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 FORC55_2638 28d0587cf50004deb57cffa5ecc9ddb8 465 PIRSF PIRSF006247 1 465 8.3E-173 T 17-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 FORC55_2638 28d0587cf50004deb57cffa5ecc9ddb8 465 Pfam PF02386 Cation transport protein 19 457 3.7E-91 T 17-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 FORC55_0962 53e8f35902093b84abf533313202f46b 644 PIRSF PIRSF000549 1 644 2.9E-286 T 17-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 FORC55_0962 53e8f35902093b84abf533313202f46b 644 SUPERFAMILY SSF52540 73 368 6.17E-18 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0962 53e8f35902093b84abf533313202f46b 644 SMART SM00763 19 380 9.7E-217 T 17-10-2018 IPR013153 PrkA AAA domain FORC55_0962 53e8f35902093b84abf533313202f46b 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 6.6E-73 T 17-10-2018 IPR010650 PrkA C-terminal domain FORC55_0962 53e8f35902093b84abf533313202f46b 644 Pfam PF08298 PrkA AAA domain 20 380 2.2E-174 T 17-10-2018 IPR013153 PrkA AAA domain FORC55_2058 b71364191afc645bae935176cc687972 95 Gene3D G3DSA:1.10.10.10 1 95 1.3E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2058 b71364191afc645bae935176cc687972 95 SUPERFAMILY SSF46785 7 92 5.89E-26 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2058 b71364191afc645bae935176cc687972 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.2E-15 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_2058 b71364191afc645bae935176cc687972 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 1.2E-15 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_2058 b71364191afc645bae935176cc687972 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.2E-15 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_2058 b71364191afc645bae935176cc687972 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 1.2E-15 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_2058 b71364191afc645bae935176cc687972 95 SMART SM00418 10 88 7.2E-30 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_2058 b71364191afc645bae935176cc687972 95 Pfam PF01022 Bacterial regulatory protein, arsR family 18 63 5.8E-18 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_2901 7bedfdc33de6f030ebe265e47dbd7f29 252 Pfam PF13230 Glutamine amidotransferases class-II 25 196 6.6E-21 T 17-10-2018 IPR026869 Putative glutamine amidotransferase type 2 FORC55_2901 7bedfdc33de6f030ebe265e47dbd7f29 252 SUPERFAMILY SSF56235 2 242 4.98E-36 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_2901 7bedfdc33de6f030ebe265e47dbd7f29 252 Gene3D G3DSA:3.60.20.10 1 250 5.4E-86 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_1006 4de23699e1fbd79446f266a41d2ce66e 150 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 4.0E-69 T 17-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 FORC55_1006 4de23699e1fbd79446f266a41d2ce66e 150 Pfam PF06610 L-alanine exporter 8 142 2.8E-68 T 17-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 FORC55_1006 4de23699e1fbd79446f266a41d2ce66e 150 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 32.196 T 17-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 FORC55_0732 6fff68179871259c6d9541e8b2f82d55 186 Pfam PF01713 Smr domain 107 181 9.1E-19 T 17-10-2018 IPR002625 Smr domain FORC55_0732 6fff68179871259c6d9541e8b2f82d55 186 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 183 38.65 T 17-10-2018 IPR022990 Uncharacterised protein family UPF0115 FORC55_0732 6fff68179871259c6d9541e8b2f82d55 186 SMART SM00463 104 182 1.6E-16 T 17-10-2018 IPR002625 Smr domain FORC55_0732 6fff68179871259c6d9541e8b2f82d55 186 Gene3D G3DSA:3.30.1370.110 59 185 4.5E-28 T 17-10-2018 FORC55_0732 6fff68179871259c6d9541e8b2f82d55 186 SUPERFAMILY SSF160443 105 181 4.05E-12 T 17-10-2018 IPR036063 Smr domain superfamily FORC55_3363 b90e998b24f3e218aa803ddeadcd279b 718 Gene3D G3DSA:3.40.50.300 317 607 4.7E-9 T 17-10-2018 FORC55_3363 b90e998b24f3e218aa803ddeadcd279b 718 Pfam PF13166 AAA domain 15 703 1.0E-125 T 17-10-2018 IPR026866 Protein CR006, P-loop domain FORC55_3363 b90e998b24f3e218aa803ddeadcd279b 718 Gene3D G3DSA:3.40.50.300 1 45 3.7E-5 T 17-10-2018 FORC55_3363 b90e998b24f3e218aa803ddeadcd279b 718 SUPERFAMILY SSF52540 1 579 3.85E-14 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2952 c62aeffdd7a8a43dd12a99713c4b2055 189 Gene3D G3DSA:3.10.450.50 21 189 1.2E-19 T 17-10-2018 FORC55_2952 c62aeffdd7a8a43dd12a99713c4b2055 189 SUPERFAMILY SSF54427 125 185 4.93E-5 T 17-10-2018 IPR032710 NTF2-like domain superfamily FORC55_2952 c62aeffdd7a8a43dd12a99713c4b2055 189 PIRSF PIRSF028288 1 189 1.5E-100 T 17-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 FORC55_1782 ef8c0203747d33faffcab17a0425d6ff 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 2.5E-217 T 17-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 FORC55_1782 ef8c0203747d33faffcab17a0425d6ff 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 2.7E-62 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_1782 ef8c0203747d33faffcab17a0425d6ff 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 1.6E-22 T 17-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 FORC55_1782 ef8c0203747d33faffcab17a0425d6ff 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 3.6E-13 T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_1782 ef8c0203747d33faffcab17a0425d6ff 523 SUPERFAMILY SSF55604 438 511 4.32E-20 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_1782 ef8c0203747d33faffcab17a0425d6ff 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_1782 ef8c0203747d33faffcab17a0425d6ff 523 Gene3D G3DSA:3.30.1360.60 434 513 6.4E-25 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_2410 ecea5e003ec96f6cc445baed09fd2d15 153 Gene3D G3DSA:3.40.1550.10 1 153 3.5E-45 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_2410 ecea5e003ec96f6cc445baed09fd2d15 153 SUPERFAMILY SSF103039 1 153 1.31E-37 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_2410 ecea5e003ec96f6cc445baed09fd2d15 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 7.5E-22 T 17-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain FORC55_2608 309d0d4b3934ad45e2afccd9f9317c38 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 1.2E-17 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_2608 309d0d4b3934ad45e2afccd9f9317c38 699 SUPERFAMILY SSF56935 37 699 4.97E-127 T 17-10-2018 FORC55_2608 309d0d4b3934ad45e2afccd9f9317c38 699 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 17-10-2018 IPR010916 TonB box, conserved site FORC55_2608 309d0d4b3934ad45e2afccd9f9317c38 699 Gene3D G3DSA:2.40.170.20 170 699 9.1E-129 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_2608 309d0d4b3934ad45e2afccd9f9317c38 699 Gene3D G3DSA:2.170.130.10 35 169 4.1E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily FORC55_2608 309d0d4b3934ad45e2afccd9f9317c38 699 Pfam PF00593 TonB dependent receptor 261 698 3.0E-60 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel FORC55_2608 309d0d4b3934ad45e2afccd9f9317c38 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 698 8.3E-105 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 FORC55_1970 93f5c85cd137a4173f8e7c0c390f4980 395 SUPERFAMILY SSF56322 21 387 1.96E-90 T 17-10-2018 IPR005801 ADC synthase GO:0009058 FORC55_1970 93f5c85cd137a4173f8e7c0c390f4980 395 Pfam PF00425 chorismate binding enzyme 123 377 3.0E-70 T 17-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal FORC55_1970 93f5c85cd137a4173f8e7c0c390f4980 395 Gene3D G3DSA:3.60.120.10 5 392 4.6E-118 T 17-10-2018 IPR005801 ADC synthase GO:0009058 FORC55_1970 93f5c85cd137a4173f8e7c0c390f4980 395 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 102 384 2.4E-83 T 17-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 FORC55_0527 a8a669f12039ca297b5d9f7b326d5411 779 Pfam PF07238 PilZ domain 144 228 4.4E-7 T 17-10-2018 IPR009875 PilZ domain GO:0035438 FORC55_0527 a8a669f12039ca297b5d9f7b326d5411 779 Pfam PF07238 PilZ domain 469 561 2.8E-10 T 17-10-2018 IPR009875 PilZ domain GO:0035438 FORC55_0527 a8a669f12039ca297b5d9f7b326d5411 779 SUPERFAMILY SSF141371 465 552 1.96E-6 T 17-10-2018 FORC55_0527 a8a669f12039ca297b5d9f7b326d5411 779 Gene3D G3DSA:2.40.10.220 465 588 2.0E-5 T 17-10-2018 FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 Pfam PF01189 16S rRNA methyltransferase RsmB/F 116 306 1.1E-48 T 17-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 Gene3D G3DSA:2.30.130.90 309 473 2.4E-70 T 17-10-2018 FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.2E-28 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 2.2E-28 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 2.2E-28 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 2.2E-28 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 2.2E-28 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.8E-29 T 17-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 SUPERFAMILY SSF53335 6 308 1.25E-63 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 Gene3D G3DSA:3.40.50.150 2 308 7.4E-98 T 17-10-2018 FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 473 63.507 T 17-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 17-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 1.1E-10 T 17-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain FORC55_1321 9a185a1ed1d3fd9d6d03845f4f7c3a7c 473 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 1.9E-99 T 17-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 FORC55_2154 660cfdf75ba44e6e5d34d29f0f839b54 368 Gene3D G3DSA:1.10.10.10 298 367 2.5E-5 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2154 660cfdf75ba44e6e5d34d29f0f839b54 368 Pfam PF02661 Fic/DOC family 111 223 9.1E-16 T 17-10-2018 IPR003812 Fido domain FORC55_2154 660cfdf75ba44e6e5d34d29f0f839b54 368 SUPERFAMILY SSF140931 95 293 4.19E-39 T 17-10-2018 IPR036597 Fido-like domain superfamily FORC55_2154 660cfdf75ba44e6e5d34d29f0f839b54 368 Pfam PF13776 Domain of unknown function (DUF4172) 2 82 1.2E-29 T 17-10-2018 IPR025230 Domain of unknown function DUF4172 FORC55_2154 660cfdf75ba44e6e5d34d29f0f839b54 368 Gene3D G3DSA:1.10.3290.10 29 291 5.0E-46 T 17-10-2018 IPR036597 Fido-like domain superfamily FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 Gene3D G3DSA:1.10.8.60 187 260 5.7E-31 T 17-10-2018 FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.836 T 17-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 240 9.3E-118 T 17-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 SUPERFAMILY SSF46785 262 332 1.97E-25 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 3.5E-33 T 17-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 3.0E-39 T 17-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 SUPERFAMILY SSF52540 25 256 6.23E-54 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 Gene3D G3DSA:1.10.10.10 262 334 4.0E-32 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 SMART SM00382 56 183 3.0E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 Gene3D G3DSA:3.40.50.300 25 186 4.8E-41 T 17-10-2018 FORC55_0992 1d454ed8a3172dc3fd15fb9c15307afd 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 9.9E-148 T 17-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 FORC55_0983 a264405f6457fa653af5b0e194ce4aee 320 Pfam PF13609 Gram-negative porin 7 304 1.7E-22 T 17-10-2018 FORC55_0983 a264405f6457fa653af5b0e194ce4aee 320 Gene3D G3DSA:2.40.160.10 20 320 8.9E-35 T 17-10-2018 IPR023614 Porin domain superfamily FORC55_0983 a264405f6457fa653af5b0e194ce4aee 320 SUPERFAMILY SSF56935 20 320 1.16E-36 T 17-10-2018 FORC55_2359 1aef8f77345088dd466479c2a0e482a8 854 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 728 2.4E-211 T 17-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ FORC55_2359 1aef8f77345088dd466479c2a0e482a8 854 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 409 666 9.5E-29 T 17-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit FORC55_2359 1aef8f77345088dd466479c2a0e482a8 854 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 400 2.1E-50 T 17-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit FORC55_2359 1aef8f77345088dd466479c2a0e482a8 854 Pfam PF11874 Domain of unknown function (DUF3394) 673 852 1.8E-68 T 17-10-2018 IPR021814 Protein of unknown function DUF3394 FORC55_0969 49fee2dbb3a90b0236fe588754664eb3 328 Gene3D G3DSA:2.40.128.140 21 326 3.9E-56 T 17-10-2018 IPR037107 Putative outer membrane protein superfamily FORC55_0969 49fee2dbb3a90b0236fe588754664eb3 328 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 325 2.0E-85 T 17-10-2018 IPR018707 Protein of unknown function DUF2219 FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 69 172 4.2E-45 T 17-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 172 31.215 T 17-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 ProSitePatterns PS01068 OmpA-like domain. 104 148 - T 17-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 SUPERFAMILY SSF103088 63 172 1.57E-34 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 Pfam PF00691 OmpA family 71 166 1.0E-21 T 17-10-2018 IPR006665 OmpA-like domain FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 Gene3D G3DSA:3.30.1330.60 42 172 5.5E-42 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 72 94 5.2E-16 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 102 117 5.2E-16 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_1001 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 117 133 5.2E-16 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_0328 356348dd14c200ffa54fcc16ee10948f 173 Gene3D G3DSA:2.40.50.870 32 173 3.8E-46 T 17-10-2018 FORC55_0328 356348dd14c200ffa54fcc16ee10948f 173 Pfam PF11736 Protein of unknown function (DUF3299) 38 168 5.4E-44 T 17-10-2018 IPR021727 Protein of unknown function DUF3299 FORC55_3497 e88893710341fdb634900ef1e2b4b8ec 176 Gene3D G3DSA:2.30.110.10 11 175 4.5E-55 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 FORC55_3497 e88893710341fdb634900ef1e2b4b8ec 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 1.3E-89 T 17-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain FORC55_3497 e88893710341fdb634900ef1e2b4b8ec 176 PIRSF PIRSF004633 1 176 3.8E-79 T 17-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain FORC55_3497 e88893710341fdb634900ef1e2b4b8ec 176 SUPERFAMILY SSF50475 12 162 7.3E-34 T 17-10-2018 FORC55_3497 e88893710341fdb634900ef1e2b4b8ec 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 105 2.5E-17 T 17-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 FORC55_1836 709d1e218650f90d34a655d92b364b55 175 Pfam PF10531 SLBB domain 102 143 1.1E-9 T 17-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_1836 709d1e218650f90d34a655d92b364b55 175 Gene3D G3DSA:3.30.1950.10 30 100 3.7E-14 T 17-10-2018 FORC55_1836 709d1e218650f90d34a655d92b364b55 175 Pfam PF02563 Polysaccharide biosynthesis/export protein 22 96 3.0E-21 T 17-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 Gene3D G3DSA:3.90.960.10 240 389 9.3E-236 T 17-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 2.5E-26 T 17-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 Pfam PF03129 Anticodon binding domain 475 568 1.0E-23 T 17-10-2018 IPR004154 Anticodon-binding FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 Gene3D G3DSA:3.40.50.800 4 554 9.3E-236 T 17-10-2018 IPR036621 Anticodon-binding domain superfamily FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 SUPERFAMILY SSF52954 463 570 2.13E-33 T 17-10-2018 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 Gene3D G3DSA:3.30.930.10 11 465 9.3E-236 T 17-10-2018 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.4E-246 T 17-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 SUPERFAMILY SSF55826 218 390 3.4E-31 T 17-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 4.6E-42 T 17-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.167 T 17-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 PIRSF PIRSF001535 1 571 5.2E-266 T 17-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 SUPERFAMILY SSF55681 10 478 1.91E-99 T 17-10-2018 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 17-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 17-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 17-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 FORC55_1893 62170ef3ee5a2046ac19884596d2688d 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 17-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 FORC55_1726 7e10e438edc97724bd46f78d7f4cca6e 195 TIGRFAM TIGR00615 recR: recombination protein RecR 2 192 2.4E-77 T 17-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 FORC55_1726 7e10e438edc97724bd46f78d7f4cca6e 195 SUPERFAMILY SSF111304 2 194 4.45E-70 T 17-10-2018 IPR023627 Recombination protein RecR FORC55_1726 7e10e438edc97724bd46f78d7f4cca6e 195 Hamap MF_00017 Recombination protein RecR [recR]. 1 194 100.619 T 17-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 FORC55_1726 7e10e438edc97724bd46f78d7f4cca6e 195 Gene3D G3DSA:3.40.1360.10 73 194 1.1E-38 T 17-10-2018 FORC55_1726 7e10e438edc97724bd46f78d7f4cca6e 195 SMART SM00493 76 161 3.6E-18 T 17-10-2018 IPR006171 TOPRIM domain FORC55_1726 7e10e438edc97724bd46f78d7f4cca6e 195 Pfam PF13662 Toprim domain 77 167 2.9E-23 T 17-10-2018 IPR006171 TOPRIM domain FORC55_1726 7e10e438edc97724bd46f78d7f4cca6e 195 Pfam PF02132 RecR protein 36 72 2.6E-15 T 17-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger FORC55_1726 7e10e438edc97724bd46f78d7f4cca6e 195 Gene3D G3DSA:1.10.8.420 1 47 8.0E-18 T 17-10-2018 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 34 864 2.3E-291 T 17-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 Gene3D G3DSA:3.30.499.10 365 570 2.6E-78 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 Gene3D G3DSA:3.30.499.20 5 364 5.0E-131 T 17-10-2018 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 Gene3D G3DSA:1.10.1440.20 571 626 3.0E-9 T 17-10-2018 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 195 208 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 209 224 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 411 422 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 142 155 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 166 174 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 271 284 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 285 298 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 473 486 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 PRINTS PR00415 Aconitase family signature 364 378 1.0E-25 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 867 0.0 T 17-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 Pfam PF00694 Aconitase C-terminal domain 665 796 6.0E-31 T 17-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 Gene3D G3DSA:3.20.19.10 627 866 7.2E-84 T 17-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 SUPERFAMILY SSF52016 607 865 3.34E-67 T 17-10-2018 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 Pfam PF00330 Aconitase family (aconitate hydratase) 74 542 4.0E-148 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_1458 009238c5a3ddaf0474fb9fd5201fbca4 868 SUPERFAMILY SSF53732 27 600 1.44E-186 T 17-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 FORC55_0771 9ea66863ccde580807291d86290ec01d 142 PIRSF PIRSF000714 3 140 1.8E-51 T 17-10-2018 IPR026026 Histidine triad hydrolase, Hint-type FORC55_0771 9ea66863ccde580807291d86290ec01d 142 Gene3D G3DSA:3.30.428.10 2 141 5.0E-42 T 17-10-2018 IPR036265 HIT-like superfamily FORC55_0771 9ea66863ccde580807291d86290ec01d 142 SUPERFAMILY SSF54197 3 136 6.8E-34 T 17-10-2018 IPR036265 HIT-like superfamily FORC55_0771 9ea66863ccde580807291d86290ec01d 142 Pfam PF01230 HIT domain 11 101 2.7E-20 T 17-10-2018 IPR001310 Histidine triad (HIT) protein FORC55_2304 c3442e8b9bbae3d3e40737d52ce9fbe5 231 Gene3D G3DSA:3.30.110.170 30 227 1.4E-47 T 17-10-2018 FORC55_2304 c3442e8b9bbae3d3e40737d52ce9fbe5 231 Pfam PF04402 Protein of unknown function (DUF541) 28 227 8.0E-39 T 17-10-2018 IPR007497 Protein of unknown function DUF541 FORC55_2304 c3442e8b9bbae3d3e40737d52ce9fbe5 231 Gene3D G3DSA:3.30.70.2970 40 147 1.4E-47 T 17-10-2018 FORC55_0868 ddf61de63f097bb60ff4cff67b133f50 476 Gene3D G3DSA:3.30.300.30 371 474 1.5E-14 T 17-10-2018 FORC55_0868 ddf61de63f097bb60ff4cff67b133f50 476 Gene3D G3DSA:3.40.50.12780 9 370 3.8E-65 T 17-10-2018 FORC55_0868 ddf61de63f097bb60ff4cff67b133f50 476 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 32 462 4.7E-165 T 17-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 FORC55_0868 ddf61de63f097bb60ff4cff67b133f50 476 SUPERFAMILY SSF56801 8 468 1.31E-86 T 17-10-2018 FORC55_0868 ddf61de63f097bb60ff4cff67b133f50 476 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_0868 ddf61de63f097bb60ff4cff67b133f50 476 Pfam PF00501 AMP-binding enzyme 16 374 4.6E-52 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_3456 ea8266265189f8c27e15800d759e64b8 161 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 1.2E-25 T 17-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain FORC55_3456 ea8266265189f8c27e15800d759e64b8 161 SUPERFAMILY SSF53927 7 140 5.22E-31 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 FORC55_3456 ea8266265189f8c27e15800d759e64b8 161 Gene3D G3DSA:3.40.140.10 2 156 2.5E-40 T 17-10-2018 FORC55_3456 ea8266265189f8c27e15800d759e64b8 161 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 17-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 FORC55_3456 ea8266265189f8c27e15800d759e64b8 161 PIRSF PIRSF006019 1 147 6.2E-44 T 17-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 FORC55_1953 c8b5d18bf7f3824299570b00766e6716 90 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 83 2.2E-21 T 17-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 FORC55_1953 c8b5d18bf7f3824299570b00766e6716 90 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 90 29.664 T 17-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 FORC55_1953 c8b5d18bf7f3824299570b00766e6716 90 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 88 2.5E-31 T 17-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 FORC55_0510 be3ad8cdb50835b92000bb51c8e28207 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 367 1.7E-24 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme FORC55_0510 be3ad8cdb50835b92000bb51c8e28207 426 TIGRFAM TIGR00260 thrC: threonine synthase 51 390 1.6E-113 T 17-10-2018 IPR004450 Threonine synthase-like FORC55_0510 be3ad8cdb50835b92000bb51c8e28207 426 Gene3D G3DSA:3.40.50.1100 83 392 8.6E-137 T 17-10-2018 FORC55_0510 be3ad8cdb50835b92000bb51c8e28207 426 Pfam PF14821 Threonine synthase N terminus 8 78 1.5E-8 T 17-10-2018 IPR029144 Threonine synthase, N-terminal FORC55_0510 be3ad8cdb50835b92000bb51c8e28207 426 Gene3D G3DSA:3.90.1380.10 1 79 7.7E-31 T 17-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily FORC55_0510 be3ad8cdb50835b92000bb51c8e28207 426 SUPERFAMILY SSF53686 1 424 2.36E-130 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme FORC55_0510 be3ad8cdb50835b92000bb51c8e28207 426 Gene3D G3DSA:3.40.50.1100 101 399 8.6E-137 T 17-10-2018 FORC55_0510 be3ad8cdb50835b92000bb51c8e28207 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 17-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 FORC55_0268 bb1646d40a6ea271cab9a366e6a99c94 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 FORC55_0268 bb1646d40a6ea271cab9a366e6a99c94 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 5.7E-225 T 17-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 FORC55_0268 bb1646d40a6ea271cab9a366e6a99c94 485 Gene3D G3DSA:3.40.605.10 7 448 6.0E-140 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_0268 bb1646d40a6ea271cab9a366e6a99c94 485 Gene3D G3DSA:3.40.309.10 247 436 6.0E-140 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 FORC55_0268 bb1646d40a6ea271cab9a366e6a99c94 485 SUPERFAMILY SSF53720 2 449 5.76E-123 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_0268 bb1646d40a6ea271cab9a366e6a99c94 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 FORC55_0268 bb1646d40a6ea271cab9a366e6a99c94 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.912 T 17-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 FORC55_0268 bb1646d40a6ea271cab9a366e6a99c94 485 Pfam PF00171 Aldehyde dehydrogenase family 9 453 8.5E-119 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 FORC55_1600 4eab64bf21359dad7118038849b19ea3 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 426 5.7E-39 T 17-10-2018 IPR000160 GGDEF domain FORC55_1600 4eab64bf21359dad7118038849b19ea3 443 SUPERFAMILY SSF55073 279 429 4.71E-42 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1600 4eab64bf21359dad7118038849b19ea3 443 Gene3D G3DSA:3.30.70.270 260 431 8.7E-50 T 17-10-2018 FORC55_1600 4eab64bf21359dad7118038849b19ea3 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 429 4.6E-44 T 17-10-2018 IPR000160 GGDEF domain FORC55_1600 4eab64bf21359dad7118038849b19ea3 443 SUPERFAMILY SSF49785 40 211 1.19E-9 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_1600 4eab64bf21359dad7118038849b19ea3 443 SMART SM00267 263 430 6.2E-51 T 17-10-2018 IPR000160 GGDEF domain FORC55_2453 ada35acc0613bf26d64d75ef9790a6b2 258 ProSitePatterns PS00893 Nudix box signature. 160 181 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 FORC55_2453 ada35acc0613bf26d64d75ef9790a6b2 258 Hamap MF_00297 NADH pyrophosphatase [nudC]. 2 258 44.147 T 17-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 FORC55_2453 ada35acc0613bf26d64d75ef9790a6b2 258 Gene3D G3DSA:3.90.79.20 1 126 4.0E-35 T 17-10-2018 FORC55_2453 ada35acc0613bf26d64d75ef9790a6b2 258 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 97 125 2.3E-9 T 17-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 FORC55_2453 ada35acc0613bf26d64d75ef9790a6b2 258 Gene3D G3DSA:3.90.79.10 127 257 5.9E-40 T 17-10-2018 FORC55_2453 ada35acc0613bf26d64d75ef9790a6b2 258 SUPERFAMILY SSF55811 59 244 1.17E-42 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_2453 ada35acc0613bf26d64d75ef9790a6b2 258 Pfam PF00293 NUDIX domain 133 234 1.6E-18 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 Gene3D G3DSA:1.10.287.130 134 271 7.4E-24 T 17-10-2018 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 SUPERFAMILY SSF47384 169 223 1.47E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 272 1.5E-8 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 SMART SM00388 174 276 0.0024 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 SUPERFAMILY SSF55785 3 70 1.85E-5 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 SUPERFAMILY SSF55874 270 424 9.04E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 Pfam PF08448 PAS fold 12 131 6.0E-7 T 17-10-2018 IPR013656 PAS fold-4 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 Gene3D G3DSA:3.30.565.10 279 437 1.5E-50 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 4.3E-24 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.7E-21 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 2.7E-21 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 2.7E-21 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.7E-21 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 Gene3D G3DSA:3.30.450.20 1 133 1.2E-37 T 17-10-2018 FORC55_1698 af93240cbba1d23d5d1081dbd9fa4997 439 SMART SM00387 317 426 4.5E-35 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1098 f40e307493a5eea6fed5a12c3a42f138 184 SUPERFAMILY SSF53955 10 159 3.43E-38 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_1098 f40e307493a5eea6fed5a12c3a42f138 184 Gene3D G3DSA:1.10.530.40 3 159 1.0E-37 T 17-10-2018 FORC55_1098 f40e307493a5eea6fed5a12c3a42f138 184 Pfam PF00959 Phage lysozyme 35 125 2.5E-11 T 17-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 FORC55_3555 052889284b6bf2ca5e811249e435f942 95 Gene3D G3DSA:2.60.120.10 1 93 3.7E-35 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_3555 052889284b6bf2ca5e811249e435f942 95 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 24.63 T 17-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 FORC55_3555 052889284b6bf2ca5e811249e435f942 95 SUPERFAMILY SSF51182 1 93 5.16E-34 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_3555 052889284b6bf2ca5e811249e435f942 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 3.7E-34 T 17-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 FORC55_2849 624476a55c95b27187105a5d16ceb40f 631 SUPERFAMILY SSF53300 88 257 2.63E-17 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_2849 624476a55c95b27187105a5d16ceb40f 631 Gene3D G3DSA:3.40.50.410 82 279 2.8E-31 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_2849 624476a55c95b27187105a5d16ceb40f 631 Gene3D G3DSA:1.25.40.10 370 479 7.0E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2849 624476a55c95b27187105a5d16ceb40f 631 SUPERFAMILY SSF48452 348 445 1.2E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2849 624476a55c95b27187105a5d16ceb40f 631 Pfam PF13519 von Willebrand factor type A domain 88 194 1.3E-15 T 17-10-2018 IPR002035 von Willebrand factor, type A FORC55_2849 624476a55c95b27187105a5d16ceb40f 631 SMART SM00028 397 430 2.7E-5 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2849 624476a55c95b27187105a5d16ceb40f 631 Pfam PF07719 Tetratricopeptide repeat 400 430 4.0E-6 T 17-10-2018 IPR013105 Tetratricopeptide repeat 2 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 9.2E-20 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 2.7E-14 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 2.7E-14 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 2.7E-14 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 SMART SM00421 156 213 5.3E-23 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 Gene3D G3DSA:3.40.50.2300 182 224 2.7E-14 T 17-10-2018 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 Gene3D G3DSA:3.40.50.2300 1 181 4.8E-67 T 17-10-2018 FORC55_3539 7b753cd5a1ea7569c12c0ad67463e62f 224 SUPERFAMILY SSF46894 150 215 3.74E-20 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_0162 05c710ee490c9cb254f91728255506b5 252 ProSitePatterns PS01142 Bacterial type II secretion system protein N signature. 45 67 - T 17-10-2018 IPR000645 Type II secretion system protein N, conserved site GO:0008565|GO:0015627|GO:0015628 FORC55_0162 05c710ee490c9cb254f91728255506b5 252 Pfam PF01203 Type II secretion system (T2SS), protein N 37 246 1.6E-59 T 17-10-2018 IPR022792 Type II secretion system, protein N FORC55_2037 25d77f4bd0fed0c0efd9644aa42c270c 103 SUPERFAMILY SSF48295 2 95 2.82E-30 T 17-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 FORC55_2037 25d77f4bd0fed0c0efd9644aa42c270c 103 PIRSF PIRSF003196 1 99 3.9E-41 T 17-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 FORC55_2037 25d77f4bd0fed0c0efd9644aa42c270c 103 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 24.221 T 17-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 FORC55_2037 25d77f4bd0fed0c0efd9644aa42c270c 103 Gene3D G3DSA:1.10.1270.10 1 98 7.5E-36 T 17-10-2018 IPR038116 TrpR-like superfamily FORC55_2037 25d77f4bd0fed0c0efd9644aa42c270c 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 9 82 3.0E-35 T 17-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 FORC55_2037 25d77f4bd0fed0c0efd9644aa42c270c 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 7 89 9.2E-28 T 17-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 FORC55_2037 25d77f4bd0fed0c0efd9644aa42c270c 103 Pfam PF01371 Trp repressor protein 9 94 1.8E-33 T 17-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 FORC55_0047 7cad8c16957b1ea5696a65afc49bf54f 440 Gene3D G3DSA:3.20.20.70 193 412 1.2E-56 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0047 7cad8c16957b1ea5696a65afc49bf54f 440 SUPERFAMILY SSF51391 206 408 6.41E-61 T 17-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 FORC55_0047 7cad8c16957b1ea5696a65afc49bf54f 440 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 215 403 2.5E-46 T 17-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 FORC55_0047 7cad8c16957b1ea5696a65afc49bf54f 440 Pfam PF02581 Thiamine monophosphate synthase 214 391 4.4E-52 T 17-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 FORC55_0047 7cad8c16957b1ea5696a65afc49bf54f 440 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 188 409 19.879 T 17-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 FORC55_1821 5256217e745d05e30dd1a0ae31739b2a 105 SUPERFAMILY SSF81301 5 105 1.28E-34 T 17-10-2018 FORC55_1821 5256217e745d05e30dd1a0ae31739b2a 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.2E-36 T 17-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS FORC55_1821 5256217e745d05e30dd1a0ae31739b2a 105 Pfam PF02410 Ribosomal silencing factor during starvation 14 104 3.1E-26 T 17-10-2018 FORC55_1821 5256217e745d05e30dd1a0ae31739b2a 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 23.415 T 17-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS FORC55_1821 5256217e745d05e30dd1a0ae31739b2a 105 Gene3D G3DSA:3.30.460.10 2 105 2.1E-34 T 17-10-2018 FORC55_1751 bcfeecfa77357c7a06bb15c9f6232dc6 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 312 1.1E-39 T 17-10-2018 IPR000160 GGDEF domain FORC55_1751 bcfeecfa77357c7a06bb15c9f6232dc6 324 Gene3D G3DSA:3.30.70.270 147 323 2.5E-42 T 17-10-2018 FORC55_1751 bcfeecfa77357c7a06bb15c9f6232dc6 324 SMART SM00267 141 317 9.0E-48 T 17-10-2018 IPR000160 GGDEF domain FORC55_1751 bcfeecfa77357c7a06bb15c9f6232dc6 324 SUPERFAMILY SSF55785 14 91 3.26E-5 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1751 bcfeecfa77357c7a06bb15c9f6232dc6 324 SUPERFAMILY SSF55073 157 318 4.32E-40 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1751 bcfeecfa77357c7a06bb15c9f6232dc6 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 316 1.6E-40 T 17-10-2018 IPR000160 GGDEF domain FORC55_1751 bcfeecfa77357c7a06bb15c9f6232dc6 324 Gene3D G3DSA:3.30.450.20 9 146 6.3E-6 T 17-10-2018 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 Gene3D G3DSA:3.90.780.10 330 544 1.5E-31 T 17-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 492 2.7E-22 T 17-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 PRINTS PR01607 Apyrase family signature 203 220 1.4E-13 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 PRINTS PR01607 Apyrase family signature 257 277 1.4E-13 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 PRINTS PR01607 Apyrase family signature 230 253 1.4E-13 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 PRINTS PR01607 Apyrase family signature 26 44 1.4E-13 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 17-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 2.0E-13 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 SUPERFAMILY SSF55816 338 548 5.62E-25 T 17-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 Gene3D G3DSA:3.60.21.10 21 326 4.8E-76 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_0459 9e571bff7a1d78a0ae6fc4fb25bc7c52 634 SUPERFAMILY SSF56300 19 327 9.5E-77 T 17-10-2018 FORC55_0829 c608fd1754b8932e566528de5c808cf4 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 FORC55_0829 c608fd1754b8932e566528de5c808cf4 255 Pfam PF01026 TatD related DNase 3 253 6.0E-78 T 17-10-2018 IPR001130 TatD family GO:0016788 FORC55_0829 c608fd1754b8932e566528de5c808cf4 255 PIRSF PIRSF005902 1 255 4.5E-82 T 17-10-2018 IPR001130 TatD family GO:0016788 FORC55_0829 c608fd1754b8932e566528de5c808cf4 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 FORC55_0829 c608fd1754b8932e566528de5c808cf4 255 SUPERFAMILY SSF51556 1 253 1.6E-87 T 17-10-2018 IPR032466 Metal-dependent hydrolase FORC55_0829 c608fd1754b8932e566528de5c808cf4 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 5.2E-93 T 17-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 FORC55_0829 c608fd1754b8932e566528de5c808cf4 255 Gene3D G3DSA:3.20.20.140 1 255 1.3E-99 T 17-10-2018 FORC55_1313 5bd502c2b6f731146e326c5c43d3b8c8 355 Pfam PF01292 Prokaryotic cytochrome b561 126 307 1.9E-26 T 17-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 FORC55_1313 5bd502c2b6f731146e326c5c43d3b8c8 355 SUPERFAMILY SSF81342 120 334 2.98E-46 T 17-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 FORC55_1313 5bd502c2b6f731146e326c5c43d3b8c8 355 Gene3D G3DSA:1.20.950.20 119 336 2.7E-64 T 17-10-2018 FORC55_1313 5bd502c2b6f731146e326c5c43d3b8c8 355 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 123 328 2.5E-89 T 17-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 FORC55_1432 5b79b37505678b5feb349f28dcd96165 312 SUPERFAMILY SSF51735 1 113 4.46E-28 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1432 5b79b37505678b5feb349f28dcd96165 312 SUPERFAMILY SSF75615 109 209 4.32E-22 T 17-10-2018 FORC55_1432 5b79b37505678b5feb349f28dcd96165 312 Pfam PF13241 Putative NAD(P)-binding 6 116 1.5E-31 T 17-10-2018 FORC55_1432 5b79b37505678b5feb349f28dcd96165 312 Gene3D G3DSA:1.10.8.210 150 210 1.2E-7 T 17-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 FORC55_1432 5b79b37505678b5feb349f28dcd96165 312 Pfam PF10414 Sirohaem synthase dimerisation region 152 206 7.7E-12 T 17-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 FORC55_1432 5b79b37505678b5feb349f28dcd96165 312 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 194 7.5E-59 T 17-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 FORC55_1432 5b79b37505678b5feb349f28dcd96165 312 Gene3D G3DSA:3.30.160.110 114 148 4.5E-12 T 17-10-2018 FORC55_1432 5b79b37505678b5feb349f28dcd96165 312 Gene3D G3DSA:3.40.50.720 1 113 2.7E-36 T 17-10-2018 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 Pfam PF01235 Sodium:alanine symporter family 50 472 3.4E-148 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 PRINTS PR00175 Sodium/alanine symporter signature 86 108 3.0E-57 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 PRINTS PR00175 Sodium/alanine symporter signature 217 236 3.0E-57 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 PRINTS PR00175 Sodium/alanine symporter signature 365 387 3.0E-57 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 PRINTS PR00175 Sodium/alanine symporter signature 304 322 3.0E-57 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 PRINTS PR00175 Sodium/alanine symporter signature 189 207 3.0E-57 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 PRINTS PR00175 Sodium/alanine symporter signature 428 448 3.0E-57 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1962 6297d0bc4fda9a9eb457b3531f7436c0 516 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 9.0E-135 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0909 e38dd537793165c1f07a62edfd55a182 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 17-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 FORC55_0909 e38dd537793165c1f07a62edfd55a182 90 Gene3D G3DSA:4.10.520.10 1 90 5.5E-36 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_0909 e38dd537793165c1f07a62edfd55a182 90 SMART SM00411 1 90 3.9E-43 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0909 e38dd537793165c1f07a62edfd55a182 90 SUPERFAMILY SSF47729 1 90 9.27E-32 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_0909 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.2E-21 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0909 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.2E-21 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0909 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.2E-21 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0909 e38dd537793165c1f07a62edfd55a182 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.7E-34 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.4E-30 T 17-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.609 T 17-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.2E-125 T 17-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 3.4E-50 T 17-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 SMART SM01400 4 121 1.6E-76 T 17-10-2018 FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 Gene3D G3DSA:3.40.50.2020 148 290 4.6E-135 T 17-10-2018 FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 SUPERFAMILY SSF53271 69 306 4.53E-67 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 17-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 FORC55_0671 921aae6c9423cdb5dfa0cf3f633f732a 314 Gene3D G3DSA:3.40.50.2020 7 302 4.6E-135 T 17-10-2018 FORC55_3452 85e76f4f17b0b46ee011d34b3ef715bc 315 Pfam PF00892 EamA-like transporter family 12 141 1.6E-6 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3452 85e76f4f17b0b46ee011d34b3ef715bc 315 Pfam PF00892 EamA-like transporter family 163 289 1.8E-7 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3452 85e76f4f17b0b46ee011d34b3ef715bc 315 SUPERFAMILY SSF103481 200 293 3.66E-6 T 17-10-2018 FORC55_2490 0b0e9ecd9b6a1da9f2bd2313e0752170 593 SUPERFAMILY SSF56399 408 527 2.59E-8 T 17-10-2018 FORC55_2490 0b0e9ecd9b6a1da9f2bd2313e0752170 593 Gene3D G3DSA:3.90.210.10 411 561 6.6E-9 T 17-10-2018 FORC55_1418 55ebe5cd7bf76f604af1bee48b294922 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 502 1.9E-34 T 17-10-2018 IPR000160 GGDEF domain FORC55_1418 55ebe5cd7bf76f604af1bee48b294922 527 SUPERFAMILY SSF55073 355 505 5.81E-37 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1418 55ebe5cd7bf76f604af1bee48b294922 527 SMART SM01079 71 267 3.6E-36 T 17-10-2018 IPR006189 CHASE domain FORC55_1418 55ebe5cd7bf76f604af1bee48b294922 527 Gene3D G3DSA:3.30.70.270 336 508 3.9E-44 T 17-10-2018 FORC55_1418 55ebe5cd7bf76f604af1bee48b294922 527 SMART SM00267 339 506 1.3E-41 T 17-10-2018 IPR000160 GGDEF domain FORC55_1418 55ebe5cd7bf76f604af1bee48b294922 527 Pfam PF03924 CHASE domain 76 265 1.7E-27 T 17-10-2018 IPR006189 CHASE domain FORC55_1418 55ebe5cd7bf76f604af1bee48b294922 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 506 5.8E-39 T 17-10-2018 IPR000160 GGDEF domain FORC55_1418 55ebe5cd7bf76f604af1bee48b294922 527 Gene3D G3DSA:3.30.450.350 76 291 3.8E-7 T 17-10-2018 FORC55_2664 257d94d008123a9a68eefbaadd80941e 78 SUPERFAMILY SSF47413 9 44 1.19E-7 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2664 257d94d008123a9a68eefbaadd80941e 78 Pfam PF01381 Helix-turn-helix 11 38 4.7E-5 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2664 257d94d008123a9a68eefbaadd80941e 78 Gene3D G3DSA:1.10.260.40 1 75 2.7E-13 T 17-10-2018 FORC55_3145 429cec52b19074a31bf58c411a68c3c0 85 SUPERFAMILY SSF143120 1 74 1.7E-16 T 17-10-2018 IPR036165 YefM-like superfamily FORC55_3145 429cec52b19074a31bf58c411a68c3c0 85 Gene3D G3DSA:3.40.1620.10 1 40 1.5E-5 T 17-10-2018 FORC55_3145 429cec52b19074a31bf58c411a68c3c0 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 5.4E-11 T 17-10-2018 FORC55_3145 429cec52b19074a31bf58c411a68c3c0 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 69 8.7E-15 T 17-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM FORC55_3325 0d56f0dba62bb2e297cd295ef9a6b063 344 SUPERFAMILY SSF53850 26 336 7.41E-68 T 17-10-2018 FORC55_3325 0d56f0dba62bb2e297cd295ef9a6b063 344 Gene3D G3DSA:3.40.190.10 134 321 1.5E-116 T 17-10-2018 FORC55_3325 0d56f0dba62bb2e297cd295ef9a6b063 344 Gene3D G3DSA:3.40.190.10 32 307 1.5E-116 T 17-10-2018 FORC55_3325 0d56f0dba62bb2e297cd295ef9a6b063 344 Pfam PF13343 Bacterial extracellular solute-binding protein 89 319 9.2E-31 T 17-10-2018 FORC55_3325 0d56f0dba62bb2e297cd295ef9a6b063 344 PIRSF PIRSF002825 4 341 2.0E-65 T 17-10-2018 IPR026045 Ferric binding protein FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 Gene3D G3DSA:3.30.1490.300 82 142 4.6E-50 T 17-10-2018 FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 329 7.5E-131 T 17-10-2018 IPR005883 Type IV pilus assembly protein PilM FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 SUPERFAMILY SSF53067 185 326 1.01E-6 T 17-10-2018 FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 PIRSF PIRSF019169 1 330 5.6E-90 T 17-10-2018 IPR005883 Type IV pilus assembly protein PilM FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 Gene3D G3DSA:3.30.420.40 181 294 4.6E-50 T 17-10-2018 FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 Gene3D G3DSA:3.30.420.40 8 327 4.6E-50 T 17-10-2018 FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 SUPERFAMILY SSF53067 5 165 3.89E-7 T 17-10-2018 FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 222 3.5E-36 T 17-10-2018 IPR005883 Type IV pilus assembly protein PilM FORC55_0250 5ed392c1031880b01a89122faba2da9a 338 Pfam PF11104 Type IV pilus assembly protein PilM; 239 328 1.8E-14 T 17-10-2018 IPR005883 Type IV pilus assembly protein PilM FORC55_0747 d4b19d88bc5ffb33872d6786dc8c68a8 229 Pfam PF04172 LrgB-like family 14 224 8.8E-71 T 17-10-2018 IPR007300 CidB/LrgB family FORC55_1374 c6e60d3e20f24f843dcc199fba0e0b12 310 PIRSF PIRSF004976 2 271 7.4E-75 T 17-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 FORC55_1374 c6e60d3e20f24f843dcc199fba0e0b12 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 3 270 57.806 T 17-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 FORC55_1374 c6e60d3e20f24f843dcc199fba0e0b12 310 Pfam PF01171 PP-loop family 43 203 5.5E-15 T 17-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 FORC55_1374 c6e60d3e20f24f843dcc199fba0e0b12 310 SUPERFAMILY SSF52402 18 236 2.37E-56 T 17-10-2018 FORC55_1374 c6e60d3e20f24f843dcc199fba0e0b12 310 Gene3D G3DSA:3.40.50.620 2 263 5.3E-49 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 1.7E-251 T 17-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 SMART SM00437 280 534 5.2E-123 T 17-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 738 55.629 T 17-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Gene3D G3DSA:1.10.290.10 288 412 2.6E-163 T 17-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 SUPERFAMILY SSF57783 750 813 2.55E-19 T 17-10-2018 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Gene3D G3DSA:2.20.25.10 814 871 1.3E-27 T 17-10-2018 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 SUPERFAMILY SSF56712 3 616 3.66E-201 T 17-10-2018 IPR023405 DNA topoisomerase, type IA, core domain FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Gene3D G3DSA:3.40.50.140 1 171 2.9E-67 T 17-10-2018 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 SUPERFAMILY SSF57783 706 749 2.21E-7 T 17-10-2018 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 7.2E-36 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 114 127 7.2E-36 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 7.2E-36 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 398 414 7.2E-36 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 497 511 7.2E-36 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Gene3D G3DSA:1.10.460.10 173 578 2.6E-163 T 17-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Gene3D G3DSA:2.70.20.10 221 480 2.6E-163 T 17-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 629 1.3E-4 T 17-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 751 6.1E-11 T 17-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Gene3D G3DSA:3.30.65.10 751 813 5.6E-32 T 17-10-2018 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Gene3D G3DSA:3.30.65.10 701 750 1.2E-7 T 17-10-2018 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 SUPERFAMILY SSF57783 815 871 5.61E-22 T 17-10-2018 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 331 - T 17-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 SMART SM00493 3 140 4.5E-30 T 17-10-2018 IPR006171 TOPRIM domain FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Pfam PF01131 DNA topoisomerase 165 572 1.6E-130 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 SMART SM00436 141 229 7.2E-49 T 17-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Pfam PF01751 Toprim domain 5 150 8.9E-32 T 17-10-2018 IPR006171 TOPRIM domain FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 870 3.5E-19 T 17-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 FORC55_1034 d0e3766daacb50579f45dbd626a8b829 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 763 799 1.2E-10 T 17-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 Gene3D G3DSA:3.90.870.10 1 205 2.9E-89 T 17-10-2018 FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.377 T 17-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 Pfam PF00925 GTP cyclohydrolase II 207 367 5.2E-42 T 17-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 PIRSF PIRSF001259 3 369 1.9E-132 T 17-10-2018 FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 5.8E-85 T 17-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 SUPERFAMILY SSF55821 3 202 5.26E-87 T 17-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 Gene3D G3DSA:3.40.50.10990 206 368 2.6E-32 T 17-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 1.1E-75 T 17-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0593 2d26e9a2ba9703a82e7df0c95d8a8f77 369 SUPERFAMILY SSF142695 205 367 4.58E-49 T 17-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 FORC55_1758 f6a368c34575bc7dcd7e843503656a51 113 SUPERFAMILY SSF47226 3 111 6.8E-21 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_1758 f6a368c34575bc7dcd7e843503656a51 113 Gene3D G3DSA:1.20.120.160 1 111 6.9E-22 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 FORC55_1758 f6a368c34575bc7dcd7e843503656a51 113 Pfam PF01627 Hpt domain 25 103 1.8E-8 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 FORC55_0360 702254c5fd05dc170755dc3ca3210417 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 10 261 9.0E-99 T 17-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria FORC55_0360 702254c5fd05dc170755dc3ca3210417 263 Pfam PF02405 Permease MlaE 47 259 2.3E-75 T 17-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Gene3D G3DSA:3.40.50.300 416 590 1.7E-48 T 17-10-2018 FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 119 2.4E-8 T 17-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 SUPERFAMILY SSF46600 627 672 9.68E-11 T 17-10-2018 IPR036876 UVR domain superfamily FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 SUPERFAMILY SSF52540 3 416 1.6E-137 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.045 T 17-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.6E-8 T 17-10-2018 IPR001943 UVR domain GO:0005515 FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Gene3D G3DSA:3.40.50.300 268 415 5.3E-50 T 17-10-2018 FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Gene3D G3DSA:3.40.50.300 1 232 4.3E-74 T 17-10-2018 FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 SMART SM00487 9 426 4.0E-26 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 SMART SM00490 461 547 9.9E-19 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Pfam PF00271 Helicase conserved C-terminal domain 442 545 1.8E-16 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 17-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 SUPERFAMILY SSF52540 37 582 1.3E-35 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Pfam PF12344 Ultra-violet resistance protein B 553 594 2.4E-21 T 17-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain FORC55_1760 864bf2f69aaf3400d6ec62a34e7ca143 676 Gene3D G3DSA:4.10.860.10 631 676 5.8E-21 T 17-10-2018 FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 Gene3D G3DSA:3.20.20.70 1 367 6.3E-124 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 327 1.3E-86 T 17-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 394 4.9E-9 T 17-10-2018 FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 514 4.9E-9 T 17-10-2018 FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 SUPERFAMILY SSF51905 371 600 1.55E-38 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 Gene3D G3DSA:3.50.50.60 467 619 4.5E-109 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 SUPERFAMILY SSF51395 2 361 7.33E-110 T 17-10-2018 FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 Gene3D G3DSA:3.40.50.720 373 660 4.5E-109 T 17-10-2018 FORC55_0848 94cd2449e883c157a7a334bd94d30c02 666 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 373 627 1.5E-25 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 FORC55_2701 179eed754ceed7584f6002fb6b734cd2 817 Gene3D G3DSA:3.40.50.2000 5 474 1.7E-192 T 17-10-2018 FORC55_2701 179eed754ceed7584f6002fb6b734cd2 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 17-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 FORC55_2701 179eed754ceed7584f6002fb6b734cd2 817 PIRSF PIRSF000460 1 817 1.5E-214 T 17-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 FORC55_2701 179eed754ceed7584f6002fb6b734cd2 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 17-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 FORC55_2701 179eed754ceed7584f6002fb6b734cd2 817 SUPERFAMILY SSF53756 8 815 0.0 T 17-10-2018 FORC55_2701 179eed754ceed7584f6002fb6b734cd2 817 Gene3D G3DSA:3.40.50.2000 475 797 5.5E-144 T 17-10-2018 FORC55_2701 179eed754ceed7584f6002fb6b734cd2 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 17-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 17-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 SUPERFAMILY SSF55347 131 320 2.35E-78 T 17-10-2018 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 PIRSF PIRSF000148 4 337 3.1E-134 T 17-10-2018 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 Gene3D G3DSA:3.30.360.10 130 316 2.7E-154 T 17-10-2018 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.4E-130 T 17-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.534 T 17-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 Gene3D G3DSA:3.40.50.720 7 331 2.7E-154 T 17-10-2018 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 6.4E-63 T 17-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 1.2E-32 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 SMART SM00859 6 121 2.6E-43 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 FORC55_0742 05d73c7ed2be60cef36bff3dd02d1584 337 SUPERFAMILY SSF51735 5 159 1.97E-52 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0190 c9a042ac80c1a2832702955c81255b5b 744 Gene3D G3DSA:3.20.20.80 62 666 8.2E-205 T 17-10-2018 FORC55_0190 c9a042ac80c1a2832702955c81255b5b 744 SUPERFAMILY SSF81296 5 66 3.29E-10 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_0190 c9a042ac80c1a2832702955c81255b5b 744 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 1 741 0.0 T 17-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 FORC55_0190 c9a042ac80c1a2832702955c81255b5b 744 Pfam PF11852 Domain of unknown function (DUF3372) 572 741 3.8E-46 T 17-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal FORC55_0190 c9a042ac80c1a2832702955c81255b5b 744 SUPERFAMILY SSF51011 636 742 1.94E-24 T 17-10-2018 FORC55_0190 c9a042ac80c1a2832702955c81255b5b 744 Gene3D G3DSA:2.60.40.10 1 61 3.0E-12 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_0190 c9a042ac80c1a2832702955c81255b5b 744 SUPERFAMILY SSF51445 59 634 6.04E-139 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_0190 c9a042ac80c1a2832702955c81255b5b 744 Gene3D G3DSA:2.60.40.1180 668 743 9.0E-22 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta FORC55_3381 8f37b1762fb0d7f0cde2587981f91bdb 413 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_3381 8f37b1762fb0d7f0cde2587981f91bdb 413 SUPERFAMILY SSF46548 15 92 2.3E-16 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_3381 8f37b1762fb0d7f0cde2587981f91bdb 413 Pfam PF02754 Cysteine-rich domain 175 261 1.0E-12 T 17-10-2018 IPR004017 Cysteine-rich domain FORC55_3381 8f37b1762fb0d7f0cde2587981f91bdb 413 Pfam PF02754 Cysteine-rich domain 305 388 1.5E-11 T 17-10-2018 IPR004017 Cysteine-rich domain FORC55_3381 8f37b1762fb0d7f0cde2587981f91bdb 413 Pfam PF13183 4Fe-4S dicluster domain 15 79 1.1E-8 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_3381 8f37b1762fb0d7f0cde2587981f91bdb 413 Gene3D G3DSA:1.10.1060.10 3 96 1.5E-8 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 FORC55_3381 8f37b1762fb0d7f0cde2587981f91bdb 413 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 12 407 1.8E-226 T 17-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 FORC55_0045 5ef4ec9d91f441928528cbe599db3682 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 119 2.0E-23 T 17-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 FORC55_0045 5ef4ec9d91f441928528cbe599db3682 126 TIGRFAM TIGR00494 crcB: protein CrcB 9 120 4.5E-28 T 17-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 FORC55_0045 5ef4ec9d91f441928528cbe599db3682 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 124 18.926 T 17-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 FORC55_1613 48ac50ef50f6ebbe19ddc4f700ee7ada 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 389 1.4E-196 T 17-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 FORC55_1613 48ac50ef50f6ebbe19ddc4f700ee7ada 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 374 1.7E-47 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme FORC55_1613 48ac50ef50f6ebbe19ddc4f700ee7ada 396 Gene3D G3DSA:3.40.50.1100 9 204 3.0E-182 T 17-10-2018 FORC55_1613 48ac50ef50f6ebbe19ddc4f700ee7ada 396 PIRSF PIRSF001413 1 395 4.9E-167 T 17-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 FORC55_1613 48ac50ef50f6ebbe19ddc4f700ee7ada 396 Gene3D G3DSA:3.40.50.1100 53 383 3.0E-182 T 17-10-2018 FORC55_1613 48ac50ef50f6ebbe19ddc4f700ee7ada 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.427 T 17-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 FORC55_1613 48ac50ef50f6ebbe19ddc4f700ee7ada 396 SUPERFAMILY SSF53686 5 388 1.44E-139 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme FORC55_1613 48ac50ef50f6ebbe19ddc4f700ee7ada 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 17-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 FORC55_2983 c10dac441eabd2a0cfcc672d9a15652e 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 236 4.4E-49 T 17-10-2018 IPR001148 Alpha carbonic anhydrase domain FORC55_2983 c10dac441eabd2a0cfcc672d9a15652e 239 SMART SM01057 23 239 1.7E-97 T 17-10-2018 IPR001148 Alpha carbonic anhydrase domain FORC55_2983 c10dac441eabd2a0cfcc672d9a15652e 239 SUPERFAMILY SSF51069 22 236 1.31E-73 T 17-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily FORC55_2983 c10dac441eabd2a0cfcc672d9a15652e 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 17-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 FORC55_2983 c10dac441eabd2a0cfcc672d9a15652e 239 Gene3D G3DSA:3.10.200.10 22 237 4.0E-80 T 17-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily FORC55_0673 330016231a84c2b494622ee740d44cdd 205 Pfam PF03550 Outer membrane lipoprotein LolB 44 201 2.3E-46 T 17-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 FORC55_0673 330016231a84c2b494622ee740d44cdd 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 203 28.111 T 17-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 FORC55_0673 330016231a84c2b494622ee740d44cdd 205 SUPERFAMILY SSF89392 20 202 3.92E-51 T 17-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX FORC55_0673 330016231a84c2b494622ee740d44cdd 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 202 2.8E-41 T 17-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 FORC55_0673 330016231a84c2b494622ee740d44cdd 205 Gene3D G3DSA:2.50.20.10 26 203 1.3E-54 T 17-10-2018 FORC55_1168 aa119333dcea5949fa57cc7641ca72a2 396 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 FORC55_1168 aa119333dcea5949fa57cc7641ca72a2 396 Gene3D G3DSA:3.90.1150.10 256 390 2.7E-39 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1168 aa119333dcea5949fa57cc7641ca72a2 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 387 7.9E-116 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 FORC55_1168 aa119333dcea5949fa57cc7641ca72a2 396 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 5.0E-172 T 17-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 FORC55_1168 aa119333dcea5949fa57cc7641ca72a2 396 Gene3D G3DSA:3.40.640.10 3 255 3.4E-77 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1168 aa119333dcea5949fa57cc7641ca72a2 396 SUPERFAMILY SSF53383 21 388 7.13E-98 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1168 aa119333dcea5949fa57cc7641ca72a2 396 PIRSF PIRSF001434 1 391 7.9E-123 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 FORC55_2761 3215f8c69568ade75041efc6756a0ebf 403 SUPERFAMILY SSF103473 4 388 1.7E-52 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_2761 3215f8c69568ade75041efc6756a0ebf 403 Gene3D G3DSA:1.20.1720.10 14 389 9.6E-81 T 17-10-2018 FORC55_2761 3215f8c69568ade75041efc6756a0ebf 403 Pfam PF07690 Major Facilitator Superfamily 25 203 4.0E-33 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_3648 8d1bb84a95eb0bbb8ee0a779b159851b 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 4.7E-215 T 17-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 FORC55_3648 8d1bb84a95eb0bbb8ee0a779b159851b 496 Gene3D G3DSA:1.20.1730.10 7 495 3.1E-96 T 17-10-2018 IPR038377 Sodium/glucose symporter superfamily FORC55_3648 8d1bb84a95eb0bbb8ee0a779b159851b 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 436 1.8E-93 T 17-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 FORC55_3648 8d1bb84a95eb0bbb8ee0a779b159851b 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 418 438 - T 17-10-2018 IPR018212 Sodium/solute symporter, conserved site FORC55_3648 8d1bb84a95eb0bbb8ee0a779b159851b 496 Pfam PF00474 Sodium:solute symporter family 35 436 4.1E-106 T 17-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 FORC55_0029 9d5217df35605fec9b459e19bf104983 481 Pfam PF02386 Cation transport protein 45 475 1.4E-48 T 17-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 FORC55_0029 9d5217df35605fec9b459e19bf104983 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 2.4E-106 T 17-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 FORC55_0029 9d5217df35605fec9b459e19bf104983 481 PIRSF PIRSF006247 1 481 7.3E-167 T 17-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 FORC55_1566 a9003c7dce9f3a319c6147a04e238124 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 7.4E-107 T 17-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 FORC55_1566 a9003c7dce9f3a319c6147a04e238124 327 SUPERFAMILY SSF55681 92 327 1.75E-82 T 17-10-2018 FORC55_1566 a9003c7dce9f3a319c6147a04e238124 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.0E-25 T 17-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 FORC55_1566 a9003c7dce9f3a319c6147a04e238124 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 8.6E-114 T 17-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 FORC55_1566 a9003c7dce9f3a319c6147a04e238124 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.501 T 17-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 FORC55_1566 a9003c7dce9f3a319c6147a04e238124 327 SUPERFAMILY SSF46589 13 99 1.26E-22 T 17-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 FORC55_1566 a9003c7dce9f3a319c6147a04e238124 327 Gene3D G3DSA:3.30.930.10 7 327 7.8E-127 T 17-10-2018 FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 SMART SM00347 50 151 1.4E-19 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 Gene3D G3DSA:1.10.10.10 3 164 1.4E-33 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 Pfam PF12802 MarR family 56 115 9.8E-13 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 91 5.2E-14 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 141 161 5.2E-14 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 107 5.2E-14 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 127 5.2E-14 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 SUPERFAMILY SSF46785 23 162 4.62E-32 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3630 c62f7a439a3ed754fa4e86c31a6878a6 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 90 124 - T 17-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site FORC55_2961 0b9ca825d8b649bb32944c93cbe3271e 168 Gene3D G3DSA:3.40.930.10 1 165 8.8E-49 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_2961 0b9ca825d8b649bb32944c93cbe3271e 168 SUPERFAMILY SSF55804 5 152 1.31E-33 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_2961 0b9ca825d8b649bb32944c93cbe3271e 168 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 3.9E-36 T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_2961 0b9ca825d8b649bb32944c93cbe3271e 168 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_0200 d5ed07c8033bc033b5100568f2767242 167 PIRSF PIRSF034445 1 155 3.2E-18 T 17-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 FORC55_0200 d5ed07c8033bc033b5100568f2767242 167 Gene3D G3DSA:1.20.120.1490 38 158 1.6E-26 T 17-10-2018 FORC55_0200 d5ed07c8033bc033b5100568f2767242 167 Pfam PF07813 LTXXQ motif family protein 40 145 6.2E-21 T 17-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 FORC55_1474 dfa99ccd7e3b30aff7e43f29efb63ef7 193 Gene3D G3DSA:1.10.10.10 123 193 1.6E-13 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1474 dfa99ccd7e3b30aff7e43f29efb63ef7 193 Pfam PF00072 Response regulator receiver domain 8 116 1.0E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1474 dfa99ccd7e3b30aff7e43f29efb63ef7 193 SMART SM00448 5 115 3.3E-38 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1474 dfa99ccd7e3b30aff7e43f29efb63ef7 193 Gene3D G3DSA:3.40.50.2300 1 122 3.3E-32 T 17-10-2018 FORC55_1474 dfa99ccd7e3b30aff7e43f29efb63ef7 193 SUPERFAMILY SSF46894 131 190 3.68E-11 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_1474 dfa99ccd7e3b30aff7e43f29efb63ef7 193 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 188 1.6E-5 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_1474 dfa99ccd7e3b30aff7e43f29efb63ef7 193 SUPERFAMILY SSF52172 3 128 1.15E-35 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 273 469 29.545 T 17-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 65 83 - T 17-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 273 465 8.5E-54 T 17-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 SUPERFAMILY SSF51366 26 269 2.0E-81 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 Gene3D G3DSA:3.20.20.70 271 463 5.0E-177 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 SUPERFAMILY SSF51366 272 467 4.39E-54 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 Gene3D G3DSA:3.20.20.70 23 270 5.0E-177 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 18 269 35.152 T 17-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 FORC55_1612 7559acfc1a6a99febfecd09ad5c178f6 469 Pfam PF00218 Indole-3-glycerol phosphate synthase 21 266 6.1E-95 T 17-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 FORC55_2773 e8f5b008624356ddc24670f7176eb2c7 435 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 411 1.5E-186 T 17-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 FORC55_2773 e8f5b008624356ddc24670f7176eb2c7 435 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 177 410 1.3E-83 T 17-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 FORC55_2773 e8f5b008624356ddc24670f7176eb2c7 435 SUPERFAMILY SSF54675 7 146 5.69E-35 T 17-10-2018 FORC55_2773 e8f5b008624356ddc24670f7176eb2c7 435 PIRSF PIRSF000484 1 399 8.4E-63 T 17-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 FORC55_2773 e8f5b008624356ddc24670f7176eb2c7 435 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 412 47.728 T 17-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 FORC55_2773 e8f5b008624356ddc24670f7176eb2c7 435 Gene3D G3DSA:3.20.140.10 1 426 5.9E-178 T 17-10-2018 FORC55_2773 e8f5b008624356ddc24670f7176eb2c7 435 SUPERFAMILY SSF51690 128 410 9.81E-86 T 17-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 FORC55_0808 96bae2ff91b5b60207eb3a7d5d5b87e1 481 Pfam PF03553 Na+/H+ antiporter family 161 453 2.1E-67 T 17-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 FORC55_0808 96bae2ff91b5b60207eb3a7d5d5b87e1 481 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 1.3E-163 T 17-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 FORC55_1680 de71e4b9bb5cf1de8507d5d442ce5313 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1680 de71e4b9bb5cf1de8507d5d442ce5313 264 Gene3D G3DSA:3.40.50.300 1 255 1.6E-52 T 17-10-2018 FORC55_1680 de71e4b9bb5cf1de8507d5d442ce5313 264 SUPERFAMILY SSF52540 2 235 7.5E-49 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1680 de71e4b9bb5cf1de8507d5d442ce5313 264 Pfam PF00005 ABC transporter 22 177 9.1E-23 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1680 de71e4b9bb5cf1de8507d5d442ce5313 264 SMART SM00382 31 226 9.1E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0778 2031584ad5383cb7f2bd7a7d2fa55baa 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 21 261 6.3E-21 T 17-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 FORC55_0778 2031584ad5383cb7f2bd7a7d2fa55baa 295 PIRSF PIRSF003092 7 288 6.8E-86 T 17-10-2018 IPR025501 ATP binding protein MinD FORC55_0778 2031584ad5383cb7f2bd7a7d2fa55baa 295 Gene3D G3DSA:3.40.50.300 22 263 2.2E-58 T 17-10-2018 FORC55_0778 2031584ad5383cb7f2bd7a7d2fa55baa 295 SUPERFAMILY SSF52540 22 282 1.17E-53 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1622 59c26a21951e3c6b79c5bec37cb54f45 502 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 183 2.4E-54 T 17-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices FORC55_1622 59c26a21951e3c6b79c5bec37cb54f45 502 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 1.9E-107 T 17-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 Gene3D G3DSA:3.40.1190.10 97 302 3.9E-66 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 SUPERFAMILY SSF51984 8 97 6.28E-18 T 17-10-2018 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 SUPERFAMILY SSF53623 98 300 5.76E-55 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 Gene3D G3DSA:3.40.50.720 6 96 8.2E-21 T 17-10-2018 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 439 33.614 T 17-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 Pfam PF08245 Mur ligase middle domain 113 282 6.2E-32 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 Gene3D G3DSA:3.90.190.20 303 436 6.1E-39 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 437 1.0E-147 T 17-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 374 1.6E-6 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 FORC55_0470 d73798fbc0d9f21bcd5d893fc5569fc9 440 SUPERFAMILY SSF53244 302 439 2.79E-43 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 FORC55_2047 dd49cc0bbef475b045c415d616f2df90 307 Pfam PF13580 SIS domain 52 172 3.0E-12 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_2047 dd49cc0bbef475b045c415d616f2df90 307 SUPERFAMILY SSF53697 12 255 2.2E-74 T 17-10-2018 FORC55_2047 dd49cc0bbef475b045c415d616f2df90 307 Gene3D G3DSA:1.10.8.1080 226 304 2.8E-31 T 17-10-2018 FORC55_2047 dd49cc0bbef475b045c415d616f2df90 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 3.0E-132 T 17-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 FORC55_2047 dd49cc0bbef475b045c415d616f2df90 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.252 T 17-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 FORC55_2047 dd49cc0bbef475b045c415d616f2df90 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 17-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 FORC55_2047 dd49cc0bbef475b045c415d616f2df90 307 Gene3D G3DSA:3.40.50.10490 8 225 9.3E-85 T 17-10-2018 FORC55_1870 e5723e430b0055952991acebe8d6ac12 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 514 1.4E-36 T 17-10-2018 IPR000160 GGDEF domain FORC55_1870 e5723e430b0055952991acebe8d6ac12 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 518 1.0E-36 T 17-10-2018 IPR000160 GGDEF domain FORC55_1870 e5723e430b0055952991acebe8d6ac12 521 Gene3D G3DSA:3.30.70.270 358 521 2.2E-41 T 17-10-2018 FORC55_1870 e5723e430b0055952991acebe8d6ac12 521 SUPERFAMILY SSF55073 366 519 4.08E-37 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1870 e5723e430b0055952991acebe8d6ac12 521 SMART SM00267 351 521 3.4E-38 T 17-10-2018 IPR000160 GGDEF domain FORC55_1157 a5b57a752cd50ab1c7263bdc60cd7411 527 Gene3D G3DSA:3.40.190.10 204 513 1.6E-143 T 17-10-2018 FORC55_1157 a5b57a752cd50ab1c7263bdc60cd7411 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 443 7.1E-81 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_1157 a5b57a752cd50ab1c7263bdc60cd7411 527 PIRSF PIRSF002741 10 526 4.3E-90 T 17-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 FORC55_1157 a5b57a752cd50ab1c7263bdc60cd7411 527 SUPERFAMILY SSF53850 22 522 5.61E-129 T 17-10-2018 FORC55_1157 a5b57a752cd50ab1c7263bdc60cd7411 527 Gene3D G3DSA:3.90.76.10 31 203 1.6E-143 T 17-10-2018 FORC55_1157 a5b57a752cd50ab1c7263bdc60cd7411 527 Gene3D G3DSA:3.10.105.10 283 501 1.6E-143 T 17-10-2018 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 SMART SM00341 542 618 8.2E-23 T 17-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 27 615 5.1E-258 T 17-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 SUPERFAMILY SSF52540 220 466 1.53E-63 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Pfam PF16124 RecQ zinc-binding 355 416 2.0E-17 T 17-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 SMART SM00956 423 526 7.1E-50 T 17-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Gene3D G3DSA:3.40.50.300 221 352 1.1E-42 T 17-10-2018 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 SUPERFAMILY SSF47819 543 617 1.05E-25 T 17-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Pfam PF09382 RQC domain 418 526 7.7E-38 T 17-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Gene3D G3DSA:1.10.10.10 353 535 1.5E-54 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 SMART SM00490 262 343 2.2E-29 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 SUPERFAMILY SSF52540 26 211 7.14E-43 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 28 475 3.0E-191 T 17-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 SMART SM00487 34 230 2.9E-28 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Pfam PF00270 DEAD/DEAH box helicase 42 197 2.8E-19 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Pfam PF00271 Helicase conserved C-terminal domain 238 342 5.2E-20 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Gene3D G3DSA:1.10.150.80 536 618 4.5E-28 T 17-10-2018 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Pfam PF00570 HRDC domain 546 612 8.7E-23 T 17-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 FORC55_2612 a203a8ae4867d17de437c0a9cea7f4e4 620 Gene3D G3DSA:3.40.50.300 15 220 1.7E-83 T 17-10-2018 FORC55_1494 5342fadae3562d42b80e7c550e7666cf 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 8.0E-98 T 17-10-2018 IPR005130 Serine dehydratase-like, alpha subunit FORC55_1494 5342fadae3562d42b80e7c550e7666cf 453 SUPERFAMILY SSF143548 16 157 3.66E-45 T 17-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 FORC55_1494 5342fadae3562d42b80e7c550e7666cf 453 Pfam PF03315 Serine dehydratase beta chain 3 155 1.3E-55 T 17-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 FORC55_1494 5342fadae3562d42b80e7c550e7666cf 453 Gene3D G3DSA:3.30.1330.90 10 159 2.3E-50 T 17-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 FORC55_1494 5342fadae3562d42b80e7c550e7666cf 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.7E-230 T 17-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 Gene3D G3DSA:3.30.930.10 157 510 1.1E-130 T 17-10-2018 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 2.0E-200 T 17-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 8.1E-38 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 8.1E-38 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 8.1E-38 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 8.1E-38 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 8.1E-38 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.168 T 17-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 SUPERFAMILY SSF50249 16 154 8.08E-33 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 144 1.9E-7 T 17-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 SUPERFAMILY SSF55681 161 507 2.21E-118 T 17-10-2018 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 Gene3D G3DSA:2.40.50.140 9 156 1.7E-29 T 17-10-2018 FORC55_2071 c53fcb49c777baf118f9aa2b9a2c40b0 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 4.4E-81 T 17-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1451 77812faacd900556f75e100699aba9fa 378 SUPERFAMILY SSF51182 57 376 5.34E-91 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_1451 77812faacd900556f75e100699aba9fa 378 Pfam PF04209 homogentisate 1,2-dioxygenase 53 375 5.9E-24 T 17-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 FORC55_1451 77812faacd900556f75e100699aba9fa 378 Gene3D G3DSA:2.60.120.10 70 168 2.1E-12 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_3450 57d37db3a90bb904a28a5c567e73716c 292 Pfam PF03466 LysR substrate binding domain 101 283 2.3E-14 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3450 57d37db3a90bb904a28a5c567e73716c 292 Gene3D G3DSA:1.10.10.10 1 88 9.0E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3450 57d37db3a90bb904a28a5c567e73716c 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.0E-15 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3450 57d37db3a90bb904a28a5c567e73716c 292 SUPERFAMILY SSF46785 1 83 5.44E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3450 57d37db3a90bb904a28a5c567e73716c 292 SUPERFAMILY SSF53850 94 289 3.44E-22 T 17-10-2018 FORC55_3450 57d37db3a90bb904a28a5c567e73716c 292 Gene3D G3DSA:3.40.190.290 92 275 4.7E-34 T 17-10-2018 FORC55_0538 c1bcf323201e38723357e65670c35b23 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 1.7E-11 T 17-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 FORC55_0538 c1bcf323201e38723357e65670c35b23 483 Gene3D G3DSA:3.40.50.20 206 291 1.3E-6 T 17-10-2018 FORC55_0538 c1bcf323201e38723357e65670c35b23 483 SUPERFAMILY SSF56059 268 476 3.16E-39 T 17-10-2018 FORC55_0538 c1bcf323201e38723357e65670c35b23 483 Gene3D G3DSA:3.30.1490.20 293 359 1.5E-5 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_0538 c1bcf323201e38723357e65670c35b23 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 6.9E-42 T 17-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain FORC55_0538 c1bcf323201e38723357e65670c35b23 483 Gene3D G3DSA:3.30.470.20 361 475 1.7E-19 T 17-10-2018 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 Gene3D G3DSA:1.10.8.410 327 375 4.5E-21 T 17-10-2018 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 Gene3D G3DSA:1.20.1330.10 44 326 2.2E-78 T 17-10-2018 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 SUPERFAMILY SSF64518 1 375 1.23E-97 T 17-10-2018 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 Gene3D G3DSA:3.30.70.2120 174 274 2.2E-78 T 17-10-2018 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.8E-44 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 PRINTS PR00207 Flagellin signature 37 54 5.4E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 PRINTS PR00207 Flagellin signature 76 95 5.4E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 PRINTS PR00207 Flagellin signature 111 134 5.4E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 Pfam PF07196 Flagellin hook IN motif 193 247 4.5E-12 T 17-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 FORC55_0709 4c29e5238dc1ff16aaa7a077681adcf6 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 2.6E-26 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_1693 e83f9e956463cdd980f6a8834f5e2b86 270 Gene3D G3DSA:3.40.190.10 23 234 2.4E-39 T 17-10-2018 FORC55_1693 e83f9e956463cdd980f6a8834f5e2b86 270 Gene3D G3DSA:3.40.190.10 102 202 2.4E-39 T 17-10-2018 FORC55_1693 e83f9e956463cdd980f6a8834f5e2b86 270 SUPERFAMILY SSF53850 3 267 5.3E-34 T 17-10-2018 FORC55_1693 e83f9e956463cdd980f6a8834f5e2b86 270 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 253 6.5E-56 T 17-10-2018 FORC55_3400 32bedad516c03b90eeba22936071c19e 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.9E-28 T 17-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 FORC55_3400 32bedad516c03b90eeba22936071c19e 193 PIRSF PIRSF011489 1 193 6.6E-85 T 17-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 FORC55_0371 9872ae0aa824ded3f618df3a4fe9872f 458 Pfam PF13638 PIN domain 9 149 1.3E-34 T 17-10-2018 IPR002716 PIN domain FORC55_0371 9872ae0aa824ded3f618df3a4fe9872f 458 Pfam PF02562 PhoH-like protein 248 452 9.5E-54 T 17-10-2018 IPR003714 PhoH-like protein GO:0005524 FORC55_0371 9872ae0aa824ded3f618df3a4fe9872f 458 SUPERFAMILY SSF52540 157 437 2.08E-29 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0371 9872ae0aa824ded3f618df3a4fe9872f 458 SMART SM00670 7 141 4.1E-8 T 17-10-2018 IPR002716 PIN domain FORC55_0371 9872ae0aa824ded3f618df3a4fe9872f 458 Gene3D G3DSA:3.40.50.1010 3 155 4.5E-27 T 17-10-2018 FORC55_0371 9872ae0aa824ded3f618df3a4fe9872f 458 SUPERFAMILY SSF88723 7 157 7.06E-14 T 17-10-2018 IPR029060 PIN-like domain superfamily FORC55_0371 9872ae0aa824ded3f618df3a4fe9872f 458 Gene3D G3DSA:3.40.50.300 246 456 5.8E-65 T 17-10-2018 FORC55_3577 691294fe2b7087b256f43a67d2473ed0 322 Pfam PF02274 Amidinotransferase 24 319 2.8E-74 T 17-10-2018 FORC55_3577 691294fe2b7087b256f43a67d2473ed0 322 Gene3D G3DSA:3.75.10.10 18 314 5.3E-44 T 17-10-2018 FORC55_3577 691294fe2b7087b256f43a67d2473ed0 322 SUPERFAMILY SSF55909 20 316 7.57E-38 T 17-10-2018 FORC55_3577 691294fe2b7087b256f43a67d2473ed0 322 PIRSF PIRSF028188 4 322 4.8E-158 T 17-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 SUPERFAMILY SSF51726 396 757 3.01E-114 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 PIRSF PIRSF000382 1 761 0.0 T 17-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 758 0.0 T 17-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 SUPERFAMILY SSF51726 4 393 6.41E-108 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 36.007 T 17-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 314 3.0E-120 T 17-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 FORC55_1134 7cd02faf71ebe5e73fb477b04b3b69f2 761 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 9.5E-151 T 17-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 FORC55_2605 5e4d38ebecbbffec81c147729ef00c69 653 Gene3D G3DSA:1.10.3470.10 332 651 1.3E-70 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_2605 5e4d38ebecbbffec81c147729ef00c69 653 Gene3D G3DSA:1.10.3470.10 1 328 4.1E-61 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_2605 5e4d38ebecbbffec81c147729ef00c69 653 SUPERFAMILY SSF81345 337 648 4.58E-63 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_2605 5e4d38ebecbbffec81c147729ef00c69 653 Pfam PF01032 FecCD transport family 372 648 9.3E-68 T 17-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 FORC55_2605 5e4d38ebecbbffec81c147729ef00c69 653 Pfam PF01032 FecCD transport family 13 323 1.1E-60 T 17-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 FORC55_2605 5e4d38ebecbbffec81c147729ef00c69 653 SUPERFAMILY SSF81345 5 323 1.7E-54 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_1967 fa4737df661530950593128a94cc793b 319 Pfam PF01497 Periplasmic binding protein 49 287 2.1E-20 T 17-10-2018 IPR002491 ABC transporter periplasmic binding domain FORC55_1967 fa4737df661530950593128a94cc793b 319 SUPERFAMILY SSF53807 27 291 1.14E-37 T 17-10-2018 FORC55_1967 fa4737df661530950593128a94cc793b 319 Gene3D G3DSA:3.40.50.1980 23 138 4.7E-27 T 17-10-2018 FORC55_1967 fa4737df661530950593128a94cc793b 319 Gene3D G3DSA:3.40.50.1980 139 319 4.1E-72 T 17-10-2018 FORC55_3029 d11c85fec6a79c679fffca3cc0e998f1 109 SUPERFAMILY SSF55729 3 108 1.7E-18 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3029 d11c85fec6a79c679fffca3cc0e998f1 109 Gene3D G3DSA:3.40.630.30 2 109 6.5E-20 T 17-10-2018 FORC55_3029 d11c85fec6a79c679fffca3cc0e998f1 109 Pfam PF00583 Acetyltransferase (GNAT) family 33 107 1.2E-8 T 17-10-2018 IPR000182 GNAT domain FORC55_2744 05767739e04fc0b42c0705b62f00e0f1 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 6.5E-25 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_2744 05767739e04fc0b42c0705b62f00e0f1 713 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 713 1.6E-191 T 17-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 FORC55_2744 05767739e04fc0b42c0705b62f00e0f1 713 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 713 1.9E-171 T 17-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 FORC55_2744 05767739e04fc0b42c0705b62f00e0f1 713 Pfam PF00593 TonB dependent receptor 210 711 2.7E-51 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel FORC55_2744 05767739e04fc0b42c0705b62f00e0f1 713 Gene3D G3DSA:2.170.130.10 28 155 1.4E-30 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily FORC55_2744 05767739e04fc0b42c0705b62f00e0f1 713 Gene3D G3DSA:2.40.170.20 166 713 2.8E-79 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_2744 05767739e04fc0b42c0705b62f00e0f1 713 SUPERFAMILY SSF56935 21 713 9.16E-107 T 17-10-2018 FORC55_1078 0d4a4b8b88d571bde64201a8e19b1d29 566 Pfam PF09588 YqaJ-like viral recombinase domain 18 154 2.1E-13 T 17-10-2018 IPR019080 YqaJ viral recombinase FORC55_1078 0d4a4b8b88d571bde64201a8e19b1d29 566 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 12 160 7.7E-24 T 17-10-2018 IPR017482 Putative phage-type endonuclease FORC55_1078 0d4a4b8b88d571bde64201a8e19b1d29 566 SUPERFAMILY SSF52980 9 197 5.9E-24 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_1078 0d4a4b8b88d571bde64201a8e19b1d29 566 Gene3D G3DSA:3.90.320.10 12 213 2.3E-27 T 17-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal FORC55_1813 65a5be14a50ea5f9f2905f4b0bfa196e 367 Pfam PF02562 PhoH-like protein 120 323 1.3E-94 T 17-10-2018 IPR003714 PhoH-like protein GO:0005524 FORC55_1813 65a5be14a50ea5f9f2905f4b0bfa196e 367 Gene3D G3DSA:3.40.50.300 117 323 9.9E-74 T 17-10-2018 FORC55_1813 65a5be14a50ea5f9f2905f4b0bfa196e 367 SUPERFAMILY SSF52540 119 320 4.23E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1813 65a5be14a50ea5f9f2905f4b0bfa196e 367 SUPERFAMILY SSF54791 17 75 5.47E-5 T 17-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 Gene3D G3DSA:3.30.70.1660 115 343 1.0E-96 T 17-10-2018 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 5.7E-172 T 17-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 Pfam PF00472 RF-1 domain 218 323 6.0E-40 T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 Gene3D G3DSA:1.20.58.410 3 104 8.5E-9 T 17-10-2018 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 Gene3D G3DSA:3.30.160.20 212 293 1.0E-96 T 17-10-2018 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 Pfam PF03462 PCRF domain 13 205 5.4E-77 T 17-10-2018 IPR005139 Peptide chain release factor GO:0006415 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 SMART SM00937 67 180 6.5E-69 T 17-10-2018 IPR005139 Peptide chain release factor GO:0006415 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.211 T 17-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 FORC55_0675 add4cd1c327a22f6bc50f696bd06221a 362 SUPERFAMILY SSF75620 12 355 1.24E-137 T 17-10-2018 FORC55_1263 247d005a5ad3102af6733e333c2c88bb 338 Pfam PF02687 FtsX-like permease family 233 331 1.0E-9 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 FORC55_1263 247d005a5ad3102af6733e333c2c88bb 338 Pfam PF12704 MacB-like periplasmic core domain 33 166 1.0E-11 T 17-10-2018 IPR025857 MacB-like periplasmic core domain FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 Gene3D G3DSA:2.130.10.10 22 246 1.4E-28 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 Gene3D G3DSA:2.130.10.10 247 326 2.1E-7 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 192 230 0.25 T 17-10-2018 IPR001680 WD40 repeat GO:0005515 FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 65 106 160.0 T 17-10-2018 IPR001680 WD40 repeat GO:0005515 FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 150 189 4.5E-4 T 17-10-2018 IPR001680 WD40 repeat GO:0005515 FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 277 323 170.0 T 17-10-2018 IPR001680 WD40 repeat GO:0005515 FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 236 274 1.4 T 17-10-2018 IPR001680 WD40 repeat GO:0005515 FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 17-10-2018 IPR019775 WD40 repeat, conserved site FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 Pfam PF00400 WD domain, G-beta repeat 157 189 0.0025 T 17-10-2018 IPR001680 WD40 repeat GO:0005515 FORC55_2431 c443a02c07d5a191eb5161d46d94c685 326 SUPERFAMILY SSF50998 34 317 1.1E-40 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily FORC55_0324 3e37d13ac8145d54048c57a88c0a6665 302 SUPERFAMILY SSF52402 6 209 1.75E-73 T 17-10-2018 FORC55_0324 3e37d13ac8145d54048c57a88c0a6665 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 4.9E-162 T 17-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 FORC55_0324 3e37d13ac8145d54048c57a88c0a6665 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.485 T 17-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 FORC55_0324 3e37d13ac8145d54048c57a88c0a6665 302 Gene3D G3DSA:3.40.50.620 7 212 1.6E-65 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0324 3e37d13ac8145d54048c57a88c0a6665 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.5E-64 T 17-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 FORC55_0324 3e37d13ac8145d54048c57a88c0a6665 302 PIRSF PIRSF002936 1 302 3.0E-156 T 17-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 FORC55_0389 d983de9f1852420f9db5d77dad56baa6 211 SUPERFAMILY SSF46689 7 82 1.03E-12 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0389 d983de9f1852420f9db5d77dad56baa6 211 Pfam PF14514 Transcriptional regulator, TetR, C-terminal 89 208 1.2E-6 T 17-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal FORC55_0389 d983de9f1852420f9db5d77dad56baa6 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 63 1.3E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_0389 d983de9f1852420f9db5d77dad56baa6 211 SUPERFAMILY SSF48498 87 207 1.56E-7 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily FORC55_0389 d983de9f1852420f9db5d77dad56baa6 211 Gene3D G3DSA:1.10.357.10 2 210 8.0E-59 T 17-10-2018 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 SUPERFAMILY SSF55816 369 564 3.01E-40 T 17-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 SUPERFAMILY SSF56300 6 319 4.24E-73 T 17-10-2018 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 Gene3D G3DSA:3.90.780.10 369 574 9.2E-34 T 17-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 Pfam PF00149 Calcineurin-like phosphoesterase 13 251 1.4E-7 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 PRINTS PR01607 Apyrase family signature 513 532 1.1E-14 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 PRINTS PR01607 Apyrase family signature 274 294 1.1E-14 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 PRINTS PR01607 Apyrase family signature 10 28 1.1E-14 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 PRINTS PR01607 Apyrase family signature 215 232 1.1E-14 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 PRINTS PR01607 Apyrase family signature 234 257 1.1E-14 T 17-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 372 538 2.1E-25 T 17-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 FORC55_3181 5ccc81d78320725ba82cec89a457aae2 580 Gene3D G3DSA:3.60.21.10 3 368 9.5E-87 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_0560 ad9ed7db1997f3c869de958c9ce2c382 194 Pfam PF04545 Sigma-70, region 4 139 186 6.7E-14 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 FORC55_0560 ad9ed7db1997f3c869de958c9ce2c382 194 SUPERFAMILY SSF88659 127 187 3.18E-14 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like FORC55_0560 ad9ed7db1997f3c869de958c9ce2c382 194 SUPERFAMILY SSF88946 7 118 1.75E-25 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_0560 ad9ed7db1997f3c869de958c9ce2c382 194 Pfam PF04542 Sigma-70 region 2 33 99 3.9E-16 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 FORC55_0560 ad9ed7db1997f3c869de958c9ce2c382 194 Gene3D G3DSA:1.10.10.10 126 194 4.0E-17 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0560 ad9ed7db1997f3c869de958c9ce2c382 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 187 4.2E-29 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 FORC55_0560 ad9ed7db1997f3c869de958c9ce2c382 194 Gene3D G3DSA:1.10.1740.10 14 96 2.0E-23 T 17-10-2018 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.1E-45 T 17-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.8E-32 T 17-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.8E-32 T 17-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.8E-32 T 17-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.8E-32 T 17-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.8E-32 T 17-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 Gene3D G3DSA:3.40.50.1370 151 319 8.8E-146 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 Gene3D G3DSA:3.40.50.1370 5 329 8.8E-146 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 SUPERFAMILY SSF53671 4 333 3.8E-100 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.287 T 17-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 7.8E-26 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 7.8E-26 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 7.8E-26 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 7.8E-26 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 1.0E-56 T 17-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 FORC55_0370 871bc2b3eb8e1e3a34b5af0924b6e2cf 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.5E-134 T 17-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 FORC55_1973 1fc5ae7bac4be854325c4b747366a1eb 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 17-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 FORC55_1973 1fc5ae7bac4be854325c4b747366a1eb 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 181 1.8E-35 T 17-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 FORC55_2106 407385f7104d43f5d93ff284007b3ac6 551 Pfam PF06213 Cobalamin biosynthesis protein CobT 4 261 2.3E-13 T 17-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 FORC55_2106 407385f7104d43f5d93ff284007b3ac6 551 SMART SM00327 376 549 1.1E-6 T 17-10-2018 IPR002035 von Willebrand factor, type A FORC55_2106 407385f7104d43f5d93ff284007b3ac6 551 Pfam PF00092 von Willebrand factor type A domain 442 520 2.7E-6 T 17-10-2018 IPR002035 von Willebrand factor, type A FORC55_2106 407385f7104d43f5d93ff284007b3ac6 551 SUPERFAMILY SSF53300 377 524 4.01E-16 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_2106 407385f7104d43f5d93ff284007b3ac6 551 Gene3D G3DSA:3.40.50.410 374 548 8.9E-13 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_0781 dc28bcd01387f449b16dc27c3db64845 239 PIRSF PIRSF002884 13 239 1.6E-93 T 17-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 FORC55_0781 dc28bcd01387f449b16dc27c3db64845 239 SUPERFAMILY SSF75708 28 238 5.49E-66 T 17-10-2018 FORC55_0781 dc28bcd01387f449b16dc27c3db64845 239 Pfam PF04344 Chemotaxis phosphatase, CheZ 36 239 1.4E-76 T 17-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 FORC55_0781 dc28bcd01387f449b16dc27c3db64845 239 Gene3D G3DSA:1.10.287.500 55 189 1.4E-46 T 17-10-2018 FORC55_3353 862b9c5e30ea24c0bdc3b212a4c8425b 721 Pfam PF13515 Fusaric acid resistance protein-like 405 524 2.2E-22 T 17-10-2018 FORC55_3353 862b9c5e30ea24c0bdc3b212a4c8425b 721 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.8E-242 T 17-10-2018 IPR010020 Integral membrane protein, YccS/YhfK FORC55_3353 862b9c5e30ea24c0bdc3b212a4c8425b 721 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 1.1E-111 T 17-10-2018 IPR032692 Integral membrane protein YccS, N-terminal FORC55_3353 862b9c5e30ea24c0bdc3b212a4c8425b 721 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 17-10-2018 IPR010019 Integral membrane protein, YccS FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 3.3E-27 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.3E-27 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.3E-27 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.3E-27 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 3.3E-27 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:1.10.10.350 369 473 4.6E-24 T 17-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 5.6E-116 T 17-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.325 T 17-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 SUPERFAMILY SSF52374 3 301 8.04E-109 T 17-10-2018 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 SUPERFAMILY SSF48163 302 464 3.79E-47 T 17-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:3.40.50.620 2 317 8.8E-134 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_0642 4bb3cce6456d929add96fc10f5482e7c 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 1.0E-193 T 17-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 9.0E-38 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 9.0E-38 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 9.0E-38 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 9.0E-38 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 9.0E-38 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 9.0E-38 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 17-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 Pfam PF00318 Ribosomal protein S2 9 224 1.0E-93 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 5.4E-107 T 17-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 SUPERFAMILY SSF52313 6 232 1.7E-95 T 17-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 Gene3D G3DSA:3.40.50.10490 9 219 1.3E-90 T 17-10-2018 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.813 T 17-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 17-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 FORC55_0601 54c71827243dc6982e3b8708aa91faae 242 Gene3D G3DSA:1.10.287.610 103 150 1.3E-90 T 17-10-2018 FORC55_1803 77a91058da7c5063234d91d0393af37f 342 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 57 68 1.7E-5 T 17-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 FORC55_1803 77a91058da7c5063234d91d0393af37f 342 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 334 342 1.7E-5 T 17-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 FORC55_1803 77a91058da7c5063234d91d0393af37f 342 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 168 179 1.7E-5 T 17-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 FORC55_1803 77a91058da7c5063234d91d0393af37f 342 Gene3D G3DSA:2.40.160.10 28 342 2.0E-33 T 17-10-2018 IPR023614 Porin domain superfamily FORC55_1803 77a91058da7c5063234d91d0393af37f 342 Pfam PF00267 Gram-negative porin 31 342 5.7E-7 T 17-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 FORC55_1803 77a91058da7c5063234d91d0393af37f 342 SUPERFAMILY SSF56935 30 342 6.11E-33 T 17-10-2018 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 Gene3D G3DSA:1.10.8.60 450 536 3.7E-11 T 17-10-2018 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 2.1E-7 T 17-10-2018 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 2.1E-7 T 17-10-2018 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 2.1E-7 T 17-10-2018 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 SUPERFAMILY SSF54211 565 756 1.06E-34 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 Pfam PF13654 AAA domain 25 539 1.6E-184 T 17-10-2018 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 Gene3D G3DSA:3.30.230.10 541 768 3.6E-91 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 Gene3D G3DSA:3.40.50.300 6 198 5.9E-28 T 17-10-2018 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 Gene3D G3DSA:3.40.50.300 217 449 4.8E-56 T 17-10-2018 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 4.2E-10 T 17-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 FORC55_3559 c628e3c6967eebcaeeeb0fd10b7e9695 786 SUPERFAMILY SSF52540 30 537 2.49E-13 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1205 dccdf5c12e22b69324cf5143d4d87a53 448 PIRSF PIRSF006603 2 448 4.1E-67 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_1205 dccdf5c12e22b69324cf5143d4d87a53 448 Pfam PF01554 MatE 242 403 2.9E-16 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_1205 dccdf5c12e22b69324cf5143d4d87a53 448 Pfam PF01554 MatE 15 175 1.2E-28 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_1205 dccdf5c12e22b69324cf5143d4d87a53 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 412 6.3E-63 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_0648 81e2630fc7c7b9cff919c7ac98a1da09 377 Gene3D G3DSA:3.30.1660.40 24 113 1.2E-32 T 17-10-2018 IPR038180 FlgT, N-terminal domain superfamily FORC55_0648 81e2630fc7c7b9cff919c7ac98a1da09 377 Gene3D G3DSA:3.40.50.10610 114 290 3.9E-53 T 17-10-2018 FORC55_0648 81e2630fc7c7b9cff919c7ac98a1da09 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 3.6E-24 T 17-10-2018 IPR032370 Flagellar assembly protein T, N-terminal FORC55_0648 81e2630fc7c7b9cff919c7ac98a1da09 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 300 375 7.6E-27 T 17-10-2018 IPR032388 Flagellar assembly protein T, C-terminal FORC55_0648 81e2630fc7c7b9cff919c7ac98a1da09 377 Gene3D G3DSA:2.40.10.410 291 377 8.8E-34 T 17-10-2018 IPR038165 FlgT, C-terminal domain superfamily FORC55_0648 81e2630fc7c7b9cff919c7ac98a1da09 377 Pfam PF16539 Flagellar assembly protein T, middle domain 114 256 6.6E-43 T 17-10-2018 IPR032386 Flagellar assembly protein T, middle domain FORC55_1290 01d5ff5d46527078be88cb0d41bf507d 113 Pfam PF12290 Protein of unknown function (DUF3802) 2 109 6.1E-42 T 17-10-2018 IPR020979 Uncharacterised protein family A0KLC6 FORC55_2566 c545dc47c84dac271cf62478982194de 559 Gene3D G3DSA:1.10.287.950 229 559 5.3E-71 T 17-10-2018 FORC55_2566 c545dc47c84dac271cf62478982194de 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 525 5.0E-41 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2566 c545dc47c84dac271cf62478982194de 559 Pfam PF17200 Single Cache domain 2 49 194 3.9E-39 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_2566 c545dc47c84dac271cf62478982194de 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 325 354 4.3E-5 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2566 c545dc47c84dac271cf62478982194de 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 4.3E-5 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2566 c545dc47c84dac271cf62478982194de 559 Gene3D G3DSA:3.30.450.20 40 185 2.0E-52 T 17-10-2018 FORC55_2566 c545dc47c84dac271cf62478982194de 559 Pfam PF00672 HAMP domain 229 278 2.0E-10 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2566 c545dc47c84dac271cf62478982194de 559 SUPERFAMILY SSF58104 250 559 4.32E-73 T 17-10-2018 FORC55_2566 c545dc47c84dac271cf62478982194de 559 SMART SM00283 290 558 2.5E-62 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2566 c545dc47c84dac271cf62478982194de 559 SMART SM00304 228 282 1.7E-10 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_2566 c545dc47c84dac271cf62478982194de 559 SMART SM01049 46 135 5.5E-34 T 17-10-2018 IPR033480 Single Cache domain 2 FORC55_2524 c1e95755efb8d33bbf3ef54cc4cc18ca 372 SUPERFAMILY SSF51735 1 243 8.51E-42 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2524 c1e95755efb8d33bbf3ef54cc4cc18ca 372 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 191 1.8E-16 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 FORC55_2524 c1e95755efb8d33bbf3ef54cc4cc18ca 372 Gene3D G3DSA:3.40.50.720 1 248 8.8E-80 T 17-10-2018 FORC55_2524 c1e95755efb8d33bbf3ef54cc4cc18ca 372 Gene3D G3DSA:2.60.120.10 250 365 1.2E-28 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_2524 c1e95755efb8d33bbf3ef54cc4cc18ca 372 SUPERFAMILY SSF51182 237 364 1.78E-20 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_0509 46d629742052a57586bc8839d75adcf9 318 Pfam PF08544 GHMP kinases C terminal 223 291 7.6E-8 T 17-10-2018 IPR013750 GHMP kinase, C-terminal domain FORC55_0509 46d629742052a57586bc8839d75adcf9 318 SUPERFAMILY SSF55060 178 294 3.96E-31 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily FORC55_0509 46d629742052a57586bc8839d75adcf9 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 3.5E-108 T 17-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 28.676 T 17-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 SUPERFAMILY SSF54211 3 191 1.29E-32 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0509 46d629742052a57586bc8839d75adcf9 318 Gene3D G3DSA:3.30.230.10 5 173 5.6E-90 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0509 46d629742052a57586bc8839d75adcf9 318 PRINTS PR00958 Homoserine kinase signature 181 198 1.6E-31 T 17-10-2018 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 PRINTS PR00958 Homoserine kinase signature 260 275 1.6E-31 T 17-10-2018 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 PRINTS PR00958 Homoserine kinase signature 143 156 1.6E-31 T 17-10-2018 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 PRINTS PR00958 Homoserine kinase signature 103 118 1.6E-31 T 17-10-2018 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 PRINTS PR00958 Homoserine kinase signature 10 25 1.6E-31 T 17-10-2018 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 8.1E-13 T 17-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 Gene3D G3DSA:3.30.70.890 174 283 5.6E-90 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily FORC55_0509 46d629742052a57586bc8839d75adcf9 318 PIRSF PIRSF000676 1 316 1.1E-79 T 17-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 FORC55_0509 46d629742052a57586bc8839d75adcf9 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 17-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 FORC55_1095 3e6fa71ea6f77ede55e64165ddc171ea 148 Pfam PF08774 VRR-NUC domain 42 127 1.1E-8 T 17-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 FORC55_1095 3e6fa71ea6f77ede55e64165ddc171ea 148 Gene3D G3DSA:3.40.1350.10 24 147 1.6E-29 T 17-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 FORC55_3122 d45240dcc53c724db0b60d73984518bb 165 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 3.4E-18 T 17-10-2018 IPR000182 GNAT domain FORC55_3122 d45240dcc53c724db0b60d73984518bb 165 Gene3D G3DSA:3.40.630.30 2 162 2.8E-40 T 17-10-2018 FORC55_3122 d45240dcc53c724db0b60d73984518bb 165 SUPERFAMILY SSF55729 3 160 7.38E-36 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_1336 abac175258ddf9d9c940fd46446691e7 578 Pfam PF11949 Protein of unknown function (DUF3466) 7 236 1.0E-7 T 17-10-2018 IPR022562 Protein of unknown function DUF3466 FORC55_1336 abac175258ddf9d9c940fd46446691e7 578 Pfam PF11949 Protein of unknown function (DUF3466) 246 578 5.3E-61 T 17-10-2018 IPR022562 Protein of unknown function DUF3466 FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 129 140 3.2E-12 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 118 128 3.2E-12 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 157 169 3.2E-12 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Gene3D G3DSA:2.10.109.10 87 209 5.5E-45 T 17-10-2018 FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 2.8E-81 T 17-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Pfam PF00717 Peptidase S24-like 121 187 8.3E-16 T 17-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Hamap MF_00015 LexA repressor [lexA]. 3 206 32.151 T 17-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Pfam PF01726 LexA DNA binding domain 1 65 1.5E-29 T 17-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 SUPERFAMILY SSF46785 3 69 1.06E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 SUPERFAMILY SSF51306 82 205 1.48E-36 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily FORC55_0078 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Gene3D G3DSA:1.10.10.10 1 69 4.5E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 10 704 5.4E-253 T 17-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 Gene3D G3DSA:1.10.10.1020 6 128 4.2E-24 T 17-10-2018 FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 SUPERFAMILY SSF52540 366 704 8.35E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 Gene3D G3DSA:3.40.50.300 207 441 4.4E-72 T 17-10-2018 FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 SUPERFAMILY SSF52540 16 446 4.25E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 Pfam PF13538 UvrD-like helicase C-terminal domain 633 678 1.7E-13 T 17-10-2018 IPR027785 UvrD-like helicase C-terminal domain FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 Pfam PF13604 AAA domain 238 400 2.0E-30 T 17-10-2018 FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 18 702 49.216 T 17-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 Gene3D G3DSA:3.40.50.300 451 570 6.1E-27 T 17-10-2018 FORC55_0548 1b27ae62c5cddad63618da2a4a9a01e3 706 Gene3D G3DSA:3.40.50.300 571 693 2.6E-26 T 17-10-2018 FORC55_0889 21ce6d2d77a36928d967a890e9b9b6b1 431 PIRSF PIRSF028704 1 384 3.8E-131 T 17-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC FORC55_0889 21ce6d2d77a36928d967a890e9b9b6b1 431 Pfam PF10129 OpgC protein 3 361 2.2E-87 T 17-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC FORC55_1764 8250ec0de6f9f9d7f0d7c5970fc4e494 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.8E-107 T 17-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 FORC55_1764 8250ec0de6f9f9d7f0d7c5970fc4e494 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 3.0E-147 T 17-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 FORC55_1764 8250ec0de6f9f9d7f0d7c5970fc4e494 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.263 T 17-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 FORC55_2618 9be5f565f3ed6e621edbffe5d5b95f76 680 SUPERFAMILY SSF55486 1 677 1.78E-210 T 17-10-2018 FORC55_2618 9be5f565f3ed6e621edbffe5d5b95f76 680 Gene3D G3DSA:1.10.1370.10 140 610 4.0E-272 T 17-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 FORC55_2618 9be5f565f3ed6e621edbffe5d5b95f76 680 Pfam PF01432 Peptidase family M3 222 677 4.0E-165 T 17-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 FORC55_2618 9be5f565f3ed6e621edbffe5d5b95f76 680 Gene3D G3DSA:1.10.1370.40 13 675 4.0E-272 T 17-10-2018 FORC55_2572 c7bdca2cfb00744c322e3c7bb59ab44b 238 Gene3D G3DSA:3.30.230.70 10 236 1.3E-62 T 17-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2572 c7bdca2cfb00744c322e3c7bb59ab44b 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 4.4E-24 T 17-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2572 c7bdca2cfb00744c322e3c7bb59ab44b 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.7E-11 T 17-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2572 c7bdca2cfb00744c322e3c7bb59ab44b 238 SUPERFAMILY SSF54211 1 181 1.47E-45 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_2572 c7bdca2cfb00744c322e3c7bb59ab44b 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.006 T 17-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 FORC55_2572 c7bdca2cfb00744c322e3c7bb59ab44b 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 8.0E-113 T 17-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 FORC55_2572 c7bdca2cfb00744c322e3c7bb59ab44b 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 17-10-2018 IPR018336 Ribonuclease PH, conserved site FORC55_2572 c7bdca2cfb00744c322e3c7bb59ab44b 238 SUPERFAMILY SSF55666 153 234 1.44E-25 T 17-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 SUPERFAMILY SSF50494 43 252 2.21E-61 T 17-10-2018 IPR009003 Peptidase S1, PA clan FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 SMART SM00228 255 337 3.0E-6 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 Pfam PF13365 Trypsin-like peptidase domain 80 214 5.8E-33 T 17-10-2018 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 SUPERFAMILY SSF50156 238 345 4.15E-18 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 Gene3D G3DSA:2.40.10.10 34 140 2.5E-32 T 17-10-2018 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 Pfam PF13180 PDZ domain 255 345 5.9E-14 T 17-10-2018 IPR001478 PDZ domain GO:0005515 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 1.5E-45 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 1.5E-45 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 1.5E-45 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 PRINTS PR00834 HtrA/DegQ protease family signature 295 307 1.5E-45 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 1.5E-45 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 1.5E-45 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 Gene3D G3DSA:2.30.42.10 255 351 2.6E-21 T 17-10-2018 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 Gene3D G3DSA:2.40.10.10 142 254 2.7E-36 T 17-10-2018 FORC55_2250 2c44fc81a192f55e74b17ae5013a6fae 352 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 8.4E-183 T 17-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 FORC55_1149 847a5e26be802c3207540a89ac8e6959 402 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 400 9.6E-157 T 17-10-2018 IPR021552 Putative, 10TM heavy-metal exporter FORC55_3242 edd0cd76b1c56a9aeab7fdf7f10aebed 135 Pfam PF14760 Rnk N-terminus 6 43 9.6E-12 T 17-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain FORC55_3242 edd0cd76b1c56a9aeab7fdf7f10aebed 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 1.1E-15 T 17-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 FORC55_3242 edd0cd76b1c56a9aeab7fdf7f10aebed 135 Gene3D G3DSA:3.10.50.30 45 135 9.9E-27 T 17-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 FORC55_3242 edd0cd76b1c56a9aeab7fdf7f10aebed 135 SUPERFAMILY SSF54534 49 126 4.71E-16 T 17-10-2018 FORC55_3242 edd0cd76b1c56a9aeab7fdf7f10aebed 135 PIRSF PIRSF006092 16 127 5.8E-27 T 17-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 FORC55_0120 7b62fc167ce2e87aa742ce0fff4f9d47 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_0120 7b62fc167ce2e87aa742ce0fff4f9d47 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 3.6E-63 T 17-10-2018 FORC55_0120 7b62fc167ce2e87aa742ce0fff4f9d47 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 15 196 8.1E-58 T 17-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 FORC55_0120 7b62fc167ce2e87aa742ce0fff4f9d47 199 PIRSF PIRSF004553 18 198 9.0E-54 T 17-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 FORC55_0120 7b62fc167ce2e87aa742ce0fff4f9d47 199 Gene3D G3DSA:3.40.50.150 8 199 7.7E-66 T 17-10-2018 FORC55_0120 7b62fc167ce2e87aa742ce0fff4f9d47 199 SUPERFAMILY SSF53335 18 195 7.39E-57 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2904 19296f852f0afcb7ad1a2cac7ed34362 316 Pfam PF01032 FecCD transport family 12 312 7.0E-53 T 17-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 FORC55_2904 19296f852f0afcb7ad1a2cac7ed34362 316 Gene3D G3DSA:1.10.3470.10 4 315 4.1E-57 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_2904 19296f852f0afcb7ad1a2cac7ed34362 316 SUPERFAMILY SSF81345 6 313 1.23E-58 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_2523 f7563e187231fa1689be6b5465cba9b8 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 8 367 5.4E-67 T 17-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 FORC55_2523 f7563e187231fa1689be6b5465cba9b8 380 Gene3D G3DSA:3.40.50.2000 192 332 1.5E-102 T 17-10-2018 FORC55_2523 f7563e187231fa1689be6b5465cba9b8 380 SUPERFAMILY SSF53756 7 378 3.04E-111 T 17-10-2018 FORC55_2523 f7563e187231fa1689be6b5465cba9b8 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 32 365 3.3E-90 T 17-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_2523 f7563e187231fa1689be6b5465cba9b8 380 Gene3D G3DSA:3.40.50.2000 10 191 1.5E-102 T 17-10-2018 FORC55_0597 dabd9794a3703dc10bf72ccf42e8ae25 169 SUPERFAMILY SSF101307 8 160 3.4E-48 T 17-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 FORC55_0597 dabd9794a3703dc10bf72ccf42e8ae25 169 PIRSF PIRSF006162 4 167 7.3E-55 T 17-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 FORC55_0597 dabd9794a3703dc10bf72ccf42e8ae25 169 Pfam PF04608 Phosphatidylglycerophosphatase A 15 160 6.3E-52 T 17-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 FORC55_2349 0619d7bf89f94ccda01bf5f42b6fefa9 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 6.2E-37 T 17-10-2018 IPR024528 Threonine/Serine exporter, ThrE FORC55_3263 ce5f4f7d72e9bfc56edd1a6434afba6f 114 SUPERFAMILY SSF54593 12 112 4.05E-18 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_3263 ce5f4f7d72e9bfc56edd1a6434afba6f 114 Gene3D G3DSA:3.10.180.10 5 114 5.9E-14 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_1292 81bccc23096dd0c582ce02f3c829c59c 673 SMART SM00283 402 671 4.4E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1292 81bccc23096dd0c582ce02f3c829c59c 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 637 4.2E-37 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1292 81bccc23096dd0c582ce02f3c829c59c 673 SUPERFAMILY SSF58104 364 671 9.16E-58 T 17-10-2018 FORC55_1292 81bccc23096dd0c582ce02f3c829c59c 673 Gene3D G3DSA:1.10.287.950 343 673 8.8E-58 T 17-10-2018 FORC55_1911 93830073b6cce9c26ab5bdc616a237ef 554 SUPERFAMILY SSF52540 1 509 3.02E-69 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1911 93830073b6cce9c26ab5bdc616a237ef 554 Pfam PF13476 AAA domain 5 211 2.1E-17 T 17-10-2018 IPR038729 Rad50/SbcC-type AAA domain FORC55_1911 93830073b6cce9c26ab5bdc616a237ef 554 PIRSF PIRSF003128 1 554 1.1E-163 T 17-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 FORC55_1911 93830073b6cce9c26ab5bdc616a237ef 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 1.0E-174 T 17-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 FORC55_1911 93830073b6cce9c26ab5bdc616a237ef 554 Gene3D G3DSA:3.40.50.300 1 273 8.9E-50 T 17-10-2018 FORC55_1911 93830073b6cce9c26ab5bdc616a237ef 554 Gene3D G3DSA:3.40.50.300 274 553 4.9E-50 T 17-10-2018 FORC55_1490 cd0c6281191f4a39280e7971a81d6e5d 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 2.9E-51 T 17-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 FORC55_1490 cd0c6281191f4a39280e7971a81d6e5d 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.1E-98 T 17-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 FORC55_1490 cd0c6281191f4a39280e7971a81d6e5d 505 Gene3D G3DSA:3.20.130.10 307 490 9.5E-63 T 17-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 FORC55_1490 cd0c6281191f4a39280e7971a81d6e5d 505 SUPERFAMILY SSF117457 316 489 2.48E-64 T 17-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 FORC55_1490 cd0c6281191f4a39280e7971a81d6e5d 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.1E-63 T 17-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 FORC55_1490 cd0c6281191f4a39280e7971a81d6e5d 505 Pfam PF05683 Fumarase C-terminus 289 490 1.7E-84 T 17-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 FORC55_1490 cd0c6281191f4a39280e7971a81d6e5d 505 PIRSF PIRSF001394 1 505 3.0E-216 T 17-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 FORC55_3344 da97129aa1659213735439a51de0667e 430 Gene3D G3DSA:3.40.190.10 132 248 5.1E-31 T 17-10-2018 FORC55_3344 da97129aa1659213735439a51de0667e 430 SUPERFAMILY SSF53850 29 287 5.44E-36 T 17-10-2018 FORC55_3344 da97129aa1659213735439a51de0667e 430 Pfam PF13343 Bacterial extracellular solute-binding protein 78 288 6.7E-20 T 17-10-2018 FORC55_3344 da97129aa1659213735439a51de0667e 430 Gene3D G3DSA:3.40.190.10 41 286 5.1E-31 T 17-10-2018 FORC55_2818 29147c6aab40bfbc93ca706f07559d24 115 Pfam PF11777 Protein of unknown function (DUF3316) 2 108 3.6E-21 T 17-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 FORC55_2818 29147c6aab40bfbc93ca706f07559d24 115 PIRSF PIRSF028299 1 114 1.3E-29 T 17-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 FORC55_3385 cdc87269d820ae4affc71977d8ef02af 384 Gene3D G3DSA:1.20.1250.20 199 380 4.1E-13 T 17-10-2018 FORC55_3385 cdc87269d820ae4affc71977d8ef02af 384 SUPERFAMILY SSF103473 15 375 7.19E-38 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_3385 cdc87269d820ae4affc71977d8ef02af 384 Pfam PF07690 Major Facilitator Superfamily 16 341 2.8E-22 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_3385 cdc87269d820ae4affc71977d8ef02af 384 Gene3D G3DSA:1.20.1250.20 10 191 2.0E-16 T 17-10-2018 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 Pfam PF02421 Ferrous iron transport protein B 4 161 2.1E-57 T 17-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 Pfam PF07670 Nucleoside recognition 349 440 1.7E-13 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 Pfam PF07670 Nucleoside recognition 509 691 1.9E-36 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 3.2E-5 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 3.2E-5 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.2E-5 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 688 5.1E-178 T 17-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 Gene3D G3DSA:3.40.50.300 3 180 1.3E-42 T 17-10-2018 FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 SUPERFAMILY SSF52540 4 173 9.25E-38 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0769 14be6bb67279e3e3b5d6afda6545c386 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 1.5E-18 T 17-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 FORC55_0043 5e3cd62e7871dd12a7ddab4b0ad3d53f 91 SUPERFAMILY SSF160272 1 86 1.01E-29 T 17-10-2018 IPR036692 Shew3726-like superfamily FORC55_0043 5e3cd62e7871dd12a7ddab4b0ad3d53f 91 Gene3D G3DSA:3.30.160.140 1 90 1.1E-32 T 17-10-2018 IPR036692 Shew3726-like superfamily FORC55_0043 5e3cd62e7871dd12a7ddab4b0ad3d53f 91 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 4.9E-25 T 17-10-2018 IPR009962 Protein of unknown function DUF1488 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 2.0E-48 T 17-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.1E-31 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 SUPERFAMILY SSF47729 1 91 3.68E-30 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 92 30.277 T 17-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.4E-18 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.4E-18 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.4E-18 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 17-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 SMART SM00411 1 91 9.0E-44 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Gene3D G3DSA:4.10.520.10 40 92 2.1E-29 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_0914 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Gene3D G3DSA:4.10.520.10 2 39 2.2E-11 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_2540 e75082a921e8211c056309c39b36aa5e 168 Pfam PF13808 DDE_Tnp_1-associated 9 95 4.4E-28 T 17-10-2018 IPR032806 H repeat-associated protein, N-terminal FORC55_2540 e75082a921e8211c056309c39b36aa5e 168 Pfam PF01609 Transposase DDE domain 103 164 1.5E-5 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 Pfam PF00122 E1-E2 ATPase 386 566 5.3E-49 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 Gene3D G3DSA:2.70.150.20 373 489 1.5E-36 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 742 6.9E-28 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 601 6.9E-28 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 808 820 6.9E-28 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 449 6.9E-28 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 721 6.9E-28 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 785 804 6.9E-28 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 Pfam PF00403 Heavy-metal-associated domain 168 224 7.0E-13 T 17-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 299 895 1.4E-185 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 ProSitePatterns PS01229 Hypothetical cof family signature 2. 785 807 - T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 Gene3D G3DSA:3.30.70.100 150 236 6.0E-20 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 Gene3D G3DSA:3.30.70.100 63 132 1.6E-5 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 Gene3D G3DSA:3.40.50.1000 568 837 2.4E-97 T 17-10-2018 IPR023214 HAD superfamily FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00941 Cadmium-transporting ATPase signature 451 467 9.6E-5 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00941 Cadmium-transporting ATPase signature 470 484 9.6E-5 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00941 Cadmium-transporting ATPase signature 178 199 9.6E-5 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 PRINTS PR00941 Cadmium-transporting ATPase signature 167 176 9.6E-5 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 SUPERFAMILY SSF55008 64 130 2.88E-7 T 17-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 318 894 5.7E-186 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 357 863 1.8E-94 T 17-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 SUPERFAMILY SSF81665 351 850 1.06E-11 T 17-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 Gene3D G3DSA:3.40.1110.10 598 717 2.4E-97 T 17-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 SUPERFAMILY SSF81653 388 485 2.22E-23 T 17-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 ProSitePatterns PS01047 Heavy-metal-associated domain. 169 198 - T 17-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 583 799 4.0E-46 T 17-10-2018 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 SUPERFAMILY SSF55008 160 232 2.88E-18 T 17-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 589 595 - T 17-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 FORC55_0641 a835172ca11653687dd578de7e75dad5 906 SUPERFAMILY SSF56784 585 891 4.43E-59 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_0084 f8af8bc7203ccc0c83dd40ab762ed451 277 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 272 1.5E-113 T 17-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 FORC55_0084 f8af8bc7203ccc0c83dd40ab762ed451 277 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 86 1.3E-31 T 17-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 FORC55_0084 f8af8bc7203ccc0c83dd40ab762ed451 277 SUPERFAMILY SSF144091 97 273 2.49E-41 T 17-10-2018 FORC55_0084 f8af8bc7203ccc0c83dd40ab762ed451 277 Gene3D G3DSA:1.20.1540.10 91 277 7.2E-54 T 17-10-2018 IPR035952 Rhomboid-like superfamily FORC55_0084 f8af8bc7203ccc0c83dd40ab762ed451 277 Gene3D G3DSA:3.30.70.2350 1 69 8.4E-26 T 17-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily FORC55_0084 f8af8bc7203ccc0c83dd40ab762ed451 277 Pfam PF01694 Rhomboid family 134 273 4.0E-34 T 17-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 FORC55_0114 72305a13bee4e7e05dd31c3161013813 156 Pfam PF00210 Ferritin-like domain 18 155 6.0E-24 T 17-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 FORC55_0114 72305a13bee4e7e05dd31c3161013813 156 Gene3D G3DSA:1.20.1260.10 1 156 7.0E-58 T 17-10-2018 IPR012347 Ferritin-like FORC55_0114 72305a13bee4e7e05dd31c3161013813 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 7.8E-13 T 17-10-2018 IPR002177 DNA-binding protein Dps FORC55_0114 72305a13bee4e7e05dd31c3161013813 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 7.8E-13 T 17-10-2018 IPR002177 DNA-binding protein Dps FORC55_0114 72305a13bee4e7e05dd31c3161013813 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 7.8E-13 T 17-10-2018 IPR002177 DNA-binding protein Dps FORC55_0114 72305a13bee4e7e05dd31c3161013813 156 PIRSF PIRSF005900 1 156 1.4E-43 T 17-10-2018 IPR002177 DNA-binding protein Dps FORC55_0114 72305a13bee4e7e05dd31c3161013813 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 17-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 FORC55_0114 72305a13bee4e7e05dd31c3161013813 156 SUPERFAMILY SSF47240 2 155 9.8E-44 T 17-10-2018 IPR009078 Ferritin-like superfamily FORC55_0174 c7305d919d4077f9ec8beef0a7f7d104 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 316 6.8E-45 T 17-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 FORC55_2853 29a8f23a9d95260480e5d81d04372c71 318 Gene3D G3DSA:1.10.8.300 199 315 9.4E-38 T 17-10-2018 FORC55_2853 29a8f23a9d95260480e5d81d04372c71 318 SUPERFAMILY SSF52540 6 290 1.43E-44 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2853 29a8f23a9d95260480e5d81d04372c71 318 PIRSF PIRSF002849 1 318 4.3E-128 T 17-10-2018 FORC55_2853 29a8f23a9d95260480e5d81d04372c71 318 Gene3D G3DSA:3.40.50.300 17 183 8.2E-47 T 17-10-2018 FORC55_2853 29a8f23a9d95260480e5d81d04372c71 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 4.7E-62 T 17-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 FORC55_3266 fd692f28517758dda2c3ba34d57e1bd5 330 Pfam PF04198 Putative sugar-binding domain 65 319 6.0E-80 T 17-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 FORC55_3266 fd692f28517758dda2c3ba34d57e1bd5 330 Gene3D G3DSA:3.40.50.1360 59 324 1.5E-82 T 17-10-2018 FORC55_3266 fd692f28517758dda2c3ba34d57e1bd5 330 Gene3D G3DSA:1.10.10.60 8 58 1.4E-18 T 17-10-2018 FORC55_3266 fd692f28517758dda2c3ba34d57e1bd5 330 SUPERFAMILY SSF100950 69 319 2.85E-66 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_0677 1c874b0312a3a75fd640efd01b11067a 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 3.7E-38 T 17-10-2018 IPR007360 Invasion gene expression up-regulator, SirB FORC55_0677 1c874b0312a3a75fd640efd01b11067a 127 PIRSF PIRSF005610 1 121 1.2E-18 T 17-10-2018 IPR007360 Invasion gene expression up-regulator, SirB FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 2.1E-5 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 2.1E-5 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 2.1E-5 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 Pfam PF00459 Inositol monophosphatase family 14 253 1.4E-51 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.3E-112 T 17-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 Gene3D G3DSA:3.40.190.80 163 264 4.1E-26 T 17-10-2018 FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 Gene3D G3DSA:3.30.540.10 7 162 2.3E-46 T 17-10-2018 FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 SUPERFAMILY SSF56655 6 273 1.1E-78 T 17-10-2018 FORC55_0163 a12ecf9ffe60afcc8cd582f376d51b5e 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.194 T 17-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 FORC55_1944 218c508df1b9fd153ac3222ab9e27820 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 2.9E-29 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 FORC55_1944 218c508df1b9fd153ac3222ab9e27820 244 Gene3D G3DSA:3.30.1330.30 1 94 1.7E-17 T 17-10-2018 IPR029064 50S ribosomal protein L30e-like FORC55_1944 218c508df1b9fd153ac3222ab9e27820 244 Gene3D G3DSA:3.40.1280.10 96 244 2.1E-40 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_1944 218c508df1b9fd153ac3222ab9e27820 244 SUPERFAMILY SSF55315 5 92 8.0E-13 T 17-10-2018 IPR029064 50S ribosomal protein L30e-like FORC55_1944 218c508df1b9fd153ac3222ab9e27820 244 SUPERFAMILY SSF75217 97 243 7.85E-34 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_3632 25dd6b92bff8333a7dbf9b017ee4e09b 178 SUPERFAMILY SSF52499 2 167 3.53E-44 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 FORC55_3632 25dd6b92bff8333a7dbf9b017ee4e09b 178 Gene3D G3DSA:3.40.50.850 2 178 2.3E-38 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 FORC55_3632 25dd6b92bff8333a7dbf9b017ee4e09b 178 Pfam PF00857 Isochorismatase family 4 165 1.9E-32 T 17-10-2018 IPR000868 Isochorismatase-like GO:0003824 FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 Pfam PF00999 Sodium/hydrogen exchanger family 2 371 1.3E-54 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 Pfam PF03471 Transporter associated domain 482 555 5.1E-6 T 17-10-2018 IPR005170 Transporter-associated domain FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 SUPERFAMILY SSF116726 399 469 7.46E-10 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 SMART SM01091 478 557 2.0E-8 T 17-10-2018 IPR005170 Transporter-associated domain FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 SUPERFAMILY SSF56176 485 555 7.63E-7 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 560 49.801 T 17-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 Gene3D G3DSA:1.20.1530.20 1 377 1.9E-21 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 Pfam PF02080 TrkA-C domain 402 469 1.6E-11 T 17-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 FORC55_0187 f32fc161994c907aeee8083f91920f3f 566 Gene3D G3DSA:3.30.70.1450 397 472 1.2E-11 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 FORC55_3278 a751e3b122187572f30e9dacba21acaf 116 Pfam PF06942 GlpM protein 6 112 3.4E-50 T 17-10-2018 IPR009707 Membrane protein GlpM/YdgC FORC55_3278 a751e3b122187572f30e9dacba21acaf 116 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 22 112 3.0E-37 T 17-10-2018 IPR009707 Membrane protein GlpM/YdgC FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 PRINTS PR00095 Anthranilate synthase component I signature 369 382 2.5E-23 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 PRINTS PR00095 Anthranilate synthase component I signature 355 368 2.5E-23 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 PRINTS PR00095 Anthranilate synthase component I signature 449 463 2.5E-23 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 PRINTS PR00095 Anthranilate synthase component I signature 464 478 2.5E-23 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 Pfam PF00425 chorismate binding enzyme 247 507 6.7E-86 T 17-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 Gene3D G3DSA:3.60.120.10 7 523 7.8E-188 T 17-10-2018 IPR005801 ADC synthase GO:0009058 FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 PIRSF PIRSF001373 3 523 1.4E-256 T 17-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 198 6.6E-16 T 17-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 519 3.6E-228 T 17-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 FORC55_1609 0bbd2551a87ec8fb3dae1c5a2a206d2c 523 SUPERFAMILY SSF56322 14 515 1.57E-164 T 17-10-2018 IPR005801 ADC synthase GO:0009058 FORC55_3200 6ca45fed1f5cd10ec30e222aa54e7b19 218 SUPERFAMILY SSF52172 4 117 5.83E-28 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3200 6ca45fed1f5cd10ec30e222aa54e7b19 218 SUPERFAMILY SSF46894 121 216 5.67E-30 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_3200 6ca45fed1f5cd10ec30e222aa54e7b19 218 Gene3D G3DSA:1.10.10.10 117 218 4.2E-31 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3200 6ca45fed1f5cd10ec30e222aa54e7b19 218 SMART SM00862 145 216 4.7E-27 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_3200 6ca45fed1f5cd10ec30e222aa54e7b19 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 5.6E-24 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_3200 6ca45fed1f5cd10ec30e222aa54e7b19 218 SMART SM00448 3 111 6.8E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3200 6ca45fed1f5cd10ec30e222aa54e7b19 218 Gene3D G3DSA:3.40.50.2300 1 116 5.0E-29 T 17-10-2018 FORC55_3200 6ca45fed1f5cd10ec30e222aa54e7b19 218 Pfam PF00072 Response regulator receiver domain 6 112 3.8E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0061 4643ae7296006de631ec4e2a6a43ac9b 141 PIRSF PIRSF006276 1 141 1.3E-52 T 17-10-2018 IPR006015 Universal stress protein A FORC55_0061 4643ae7296006de631ec4e2a6a43ac9b 141 Gene3D G3DSA:3.40.50.620 2 141 5.2E-47 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0061 4643ae7296006de631ec4e2a6a43ac9b 141 SUPERFAMILY SSF52402 3 139 5.27E-32 T 17-10-2018 FORC55_0061 4643ae7296006de631ec4e2a6a43ac9b 141 Pfam PF00582 Universal stress protein family 3 138 5.2E-21 T 17-10-2018 IPR006016 UspA FORC55_0036 3c4d184dc91a0c66d317ddb461a767b7 158 Hamap MF_00598 Protein Smg [smg]. 2 158 32.768 T 17-10-2018 IPR007456 Smg FORC55_0036 3c4d184dc91a0c66d317ddb461a767b7 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 7.4E-60 T 17-10-2018 IPR007456 Smg FORC55_0855 c2698288f9683ca7db0bf823cc921db9 284 Gene3D G3DSA:3.40.50.1820 9 277 3.3E-46 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0855 c2698288f9683ca7db0bf823cc921db9 284 Pfam PF12697 Alpha/beta hydrolase family 30 275 4.3E-18 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_0855 c2698288f9683ca7db0bf823cc921db9 284 SUPERFAMILY SSF53474 12 282 1.09E-48 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0855 c2698288f9683ca7db0bf823cc921db9 284 PRINTS PR00412 Epoxide hydrolase signature 100 113 6.0E-7 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_0855 c2698288f9683ca7db0bf823cc921db9 284 PRINTS PR00412 Epoxide hydrolase signature 56 71 6.0E-7 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_0855 c2698288f9683ca7db0bf823cc921db9 284 PRINTS PR00412 Epoxide hydrolase signature 34 52 6.0E-7 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_0855 c2698288f9683ca7db0bf823cc921db9 284 PRINTS PR00412 Epoxide hydrolase signature 114 127 6.0E-7 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_0855 c2698288f9683ca7db0bf823cc921db9 284 PRINTS PR00412 Epoxide hydrolase signature 258 280 6.0E-7 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 318 6.8E-15 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 1.8E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 1.8E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 1.8E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 SMART SM00388 254 319 5.1E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 465 1.2E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 SUPERFAMILY SSF55874 309 467 1.23E-28 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 Gene3D G3DSA:1.10.287.130 205 316 3.4E-19 T 17-10-2018 FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 Gene3D G3DSA:3.30.565.10 317 468 2.5E-29 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 Pfam PF08521 Two-component sensor kinase N-terminal 24 177 2.0E-11 T 17-10-2018 IPR013727 Two-component sensor kinase, N-terminal FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 SMART SM00387 362 471 3.9E-24 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3678 ece1a53060b98dd5638163c37f333a1e 471 SUPERFAMILY SSF47384 237 319 1.39E-18 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0410 cdfef5d18121ede5b4afd4557a6671ec 321 PIRSF PIRSF005427 1 316 6.0E-87 T 17-10-2018 IPR005588 MucB/RseB FORC55_0410 cdfef5d18121ede5b4afd4557a6671ec 321 Gene3D G3DSA:3.30.200.100 217 316 2.0E-28 T 17-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily FORC55_0410 cdfef5d18121ede5b4afd4557a6671ec 321 Gene3D G3DSA:2.50.20.10 24 208 7.4E-54 T 17-10-2018 FORC55_0410 cdfef5d18121ede5b4afd4557a6671ec 321 Pfam PF17188 MucB/RseB C-terminal domain 217 311 6.9E-28 T 17-10-2018 IPR033436 MucB/RseB, C-terminal FORC55_0410 cdfef5d18121ede5b4afd4557a6671ec 321 Pfam PF03888 MucB/RseB N-terminal domain 25 195 2.1E-60 T 17-10-2018 IPR033434 MucB/RseB, N-terminal FORC55_0805 bbc4c99a2bab9b81436a6a2dd284afb3 71 Gene3D G3DSA:1.10.3390.10 1 71 1.2E-30 T 17-10-2018 IPR023202 YejL-like superfamily FORC55_0805 bbc4c99a2bab9b81436a6a2dd284afb3 71 PIRSF PIRSF006188 1 71 7.6E-37 T 17-10-2018 IPR009857 Uncharacterised protein family UPF0352 FORC55_0805 bbc4c99a2bab9b81436a6a2dd284afb3 71 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.5E-21 T 17-10-2018 IPR009857 Uncharacterised protein family UPF0352 FORC55_0805 bbc4c99a2bab9b81436a6a2dd284afb3 71 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 7.0E-33 T 17-10-2018 IPR009857 Uncharacterised protein family UPF0352 FORC55_0805 bbc4c99a2bab9b81436a6a2dd284afb3 71 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.131 T 17-10-2018 IPR009857 Uncharacterised protein family UPF0352 FORC55_0805 bbc4c99a2bab9b81436a6a2dd284afb3 71 SUPERFAMILY SSF158651 1 70 1.28E-28 T 17-10-2018 IPR023202 YejL-like superfamily FORC55_2508 e612eeabf4f612660f7d368d7e21b881 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 17-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 FORC55_2508 e612eeabf4f612660f7d368d7e21b881 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.8E-33 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_2508 e612eeabf4f612660f7d368d7e21b881 90 SMART SM00411 1 90 2.4E-43 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_2508 e612eeabf4f612660f7d368d7e21b881 90 SUPERFAMILY SSF47729 1 90 1.37E-32 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_2508 e612eeabf4f612660f7d368d7e21b881 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-36 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_2508 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.0E-20 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_2508 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.0E-20 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_2508 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.0E-20 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 17-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 Gene3D G3DSA:2.170.230.10 154 230 9.6E-75 T 17-10-2018 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 Pfam PF00717 Peptidase S24-like 85 162 4.0E-21 T 17-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C FORC55_0413 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 17-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 Gene3D G3DSA:2.10.109.10 77 271 9.6E-75 T 17-10-2018 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 8.5E-27 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 8.5E-27 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 8.5E-27 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 17-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 Pfam PF10502 Signal peptidase, peptidase S26 228 268 1.6E-6 T 17-10-2018 IPR019533 Peptidase S26 FORC55_0413 459a291734a5a64234f01c63a17854fc 298 SUPERFAMILY SSF51306 77 297 2.51E-70 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily FORC55_0413 459a291734a5a64234f01c63a17854fc 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 4.4E-48 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 FORC55_0192 b4a164a5f8c08797eec340ad4b427e50 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 7.0E-179 T 17-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 FORC55_0192 b4a164a5f8c08797eec340ad4b427e50 435 PIRSF PIRSF004539 1 435 2.0E-178 T 17-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 FORC55_0192 b4a164a5f8c08797eec340ad4b427e50 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 2.2E-143 T 17-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 FORC55_2335 e99c5b40f4ec33464520ff8c200b7b41 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 1.3E-67 T 17-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 FORC55_2335 e99c5b40f4ec33464520ff8c200b7b41 239 Pfam PF02390 Putative methyltransferase 62 232 9.4E-59 T 17-10-2018 FORC55_2335 e99c5b40f4ec33464520ff8c200b7b41 239 SUPERFAMILY SSF53335 15 236 1.88E-35 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2335 e99c5b40f4ec33464520ff8c200b7b41 239 Gene3D G3DSA:3.40.50.150 29 239 1.2E-71 T 17-10-2018 FORC55_2335 e99c5b40f4ec33464520ff8c200b7b41 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.375 T 17-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 FORC55_0058 b24a6dba360f377d8e9d6df3c98446ff 261 Gene3D G3DSA:3.40.50.150 57 260 2.9E-76 T 17-10-2018 FORC55_0058 b24a6dba360f377d8e9d6df3c98446ff 261 SUPERFAMILY SSF53335 4 255 2.62E-76 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0058 b24a6dba360f377d8e9d6df3c98446ff 261 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 6.8E-107 T 17-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 FORC55_0058 b24a6dba360f377d8e9d6df3c98446ff 261 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 39.288 T 17-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 FORC55_0058 b24a6dba360f377d8e9d6df3c98446ff 261 Gene3D G3DSA:3.40.1630.10 2 56 2.6E-17 T 17-10-2018 FORC55_2460 13b836044ce56c1591ba469aae902f14 142 Gene3D G3DSA:1.10.10.250 73 141 6.1E-25 T 17-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily FORC55_2460 13b836044ce56c1591ba469aae902f14 142 Gene3D G3DSA:3.30.1550.10 2 72 4.0E-35 T 17-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily FORC55_2460 13b836044ce56c1591ba469aae902f14 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.7E-30 T 17-10-2018 IPR020784 Ribosomal protein L11, N-terminal FORC55_2460 13b836044ce56c1591ba469aae902f14 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.0E-22 T 17-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 FORC55_2460 13b836044ce56c1591ba469aae902f14 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 17-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2460 13b836044ce56c1591ba469aae902f14 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.5E-64 T 17-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2460 13b836044ce56c1591ba469aae902f14 142 SUPERFAMILY SSF46906 68 141 2.09E-24 T 17-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily FORC55_2460 13b836044ce56c1591ba469aae902f14 142 SMART SM00649 9 141 9.2E-83 T 17-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 FORC55_2460 13b836044ce56c1591ba469aae902f14 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-17 T 17-10-2018 FORC55_2460 13b836044ce56c1591ba469aae902f14 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.643 T 17-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 FORC55_2460 13b836044ce56c1591ba469aae902f14 142 SUPERFAMILY SSF54747 3 73 3.92E-30 T 17-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily FORC55_0451 57782be46018b9c6b431b50351b623cd 562 SUPERFAMILY SSF52540 176 559 2.57E-96 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0451 57782be46018b9c6b431b50351b623cd 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 559 1.1E-240 T 17-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 FORC55_0451 57782be46018b9c6b431b50351b623cd 562 SUPERFAMILY SSF160246 1 140 6.8E-32 T 17-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily FORC55_0451 57782be46018b9c6b431b50351b623cd 562 Gene3D G3DSA:3.30.450.90 151 288 6.6E-46 T 17-10-2018 FORC55_0451 57782be46018b9c6b431b50351b623cd 562 Gene3D G3DSA:3.30.300.160 63 140 2.4E-6 T 17-10-2018 FORC55_0451 57782be46018b9c6b431b50351b623cd 562 Pfam PF00437 Type II/IV secretion system protein 189 455 2.9E-88 T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_0451 57782be46018b9c6b431b50351b623cd 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 141 3.0E-16 T 17-10-2018 IPR007831 General secretory system II, protein E, N-terminal FORC55_0451 57782be46018b9c6b431b50351b623cd 562 Gene3D G3DSA:3.40.50.300 289 561 3.1E-105 T 17-10-2018 FORC55_0451 57782be46018b9c6b431b50351b623cd 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_1422 8df1a5472e610fe6aef4c79a81934e06 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 223 380 4.0E-41 T 17-10-2018 IPR000160 GGDEF domain FORC55_1422 8df1a5472e610fe6aef4c79a81934e06 385 SUPERFAMILY SSF55073 229 379 7.85E-42 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_1422 8df1a5472e610fe6aef4c79a81934e06 385 SMART SM00267 210 380 6.4E-42 T 17-10-2018 IPR000160 GGDEF domain FORC55_1422 8df1a5472e610fe6aef4c79a81934e06 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 376 2.4E-40 T 17-10-2018 IPR000160 GGDEF domain FORC55_1422 8df1a5472e610fe6aef4c79a81934e06 385 Gene3D G3DSA:3.30.70.270 222 384 2.6E-48 T 17-10-2018 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 Pfam PF01479 S4 domain 1 43 7.9E-7 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 17-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 Gene3D G3DSA:3.30.70.580 62 226 5.0E-60 T 17-10-2018 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 Gene3D G3DSA:3.30.70.1560 127 208 5.0E-60 T 17-10-2018 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 Pfam PF00849 RNA pseudouridylate synthase 61 191 1.1E-18 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 SMART SM00363 1 59 1.2E-6 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 222 1.0E-49 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 Gene3D G3DSA:3.10.290.10 1 61 9.4E-16 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 SUPERFAMILY SSF55120 60 226 4.64E-48 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1201 ad8f6a2e14de1e459c224b5cac1bf733 231 SUPERFAMILY SSF55174 1 79 6.48E-12 T 17-10-2018 FORC55_2245 de8d52f4b6d11b1db6381760fadb44c8 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 7.3E-46 T 17-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 FORC55_2245 de8d52f4b6d11b1db6381760fadb44c8 130 Gene3D G3DSA:3.30.230.10 1 130 4.1E-53 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_2245 de8d52f4b6d11b1db6381760fadb44c8 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.585 T 17-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid FORC55_2245 de8d52f4b6d11b1db6381760fadb44c8 130 SUPERFAMILY SSF54211 5 130 2.31E-48 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_2245 de8d52f4b6d11b1db6381760fadb44c8 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 17-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 PIRSF PIRSF500134 1 344 3.2E-119 T 17-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 PIRSF PIRSF500134 338 388 0.43 T 17-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 Gene3D G3DSA:3.40.50.720 1 193 1.7E-57 T 17-10-2018 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.5E-28 T 17-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 SUPERFAMILY SSF48179 191 287 1.22E-31 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 PIRSF PIRSF000124 1 388 3.1E-136 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.6E-100 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 SMART SM00984 300 387 4.5E-13 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 Gene3D G3DSA:3.40.50.720 222 388 2.9E-64 T 17-10-2018 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 Gene3D G3DSA:1.20.5.100 194 220 2.8E-20 T 17-10-2018 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 SUPERFAMILY SSF52413 283 387 9.16E-26 T 17-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 5.0E-31 T 17-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 FORC55_3409 6e524aceddf162eda84e3e419013ce45 388 SUPERFAMILY SSF51735 1 194 4.2E-45 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 5.0E-202 T 17-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.4E-67 T 17-10-2018 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.4E-67 T 17-10-2018 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.4E-67 T 17-10-2018 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.4E-67 T 17-10-2018 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.4E-67 T 17-10-2018 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.4E-67 T 17-10-2018 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 Gene3D G3DSA:1.10.40.30 363 433 2.5E-147 T 17-10-2018 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 Pfam PF00206 Lyase 6 301 6.3E-92 T 17-10-2018 IPR022761 Fumarate lyase, N-terminal FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 17-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 SUPERFAMILY SSF48557 3 455 6.28E-141 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.2E-28 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.2E-28 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.2E-28 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.2E-28 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.228 T 17-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 Gene3D G3DSA:1.20.200.10 108 446 2.5E-147 T 17-10-2018 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 3.5E-25 T 17-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 FORC55_0244 dbc7e8bebc5e61412fe72c8a8e8efba3 458 Gene3D G3DSA:1.10.275.10 1 107 3.8E-36 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal FORC55_3176 7a61ba71952080028d387daa6c182290 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 17-10-2018 IPR024002 Formate/nitrite transporter, conserved site FORC55_3176 7a61ba71952080028d387daa6c182290 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 8.2E-77 T 17-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 FORC55_3176 7a61ba71952080028d387daa6c182290 483 SUPERFAMILY SSF54631 309 464 7.09E-24 T 17-10-2018 FORC55_3176 7a61ba71952080028d387daa6c182290 483 Pfam PF00571 CBS domain 313 364 1.8E-9 T 17-10-2018 IPR000644 CBS domain FORC55_3176 7a61ba71952080028d387daa6c182290 483 Pfam PF00571 CBS domain 382 464 8.1E-4 T 17-10-2018 IPR000644 CBS domain FORC55_3176 7a61ba71952080028d387daa6c182290 483 Pfam PF01226 Formate/nitrite transporter 17 277 4.0E-71 T 17-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 FORC55_3176 7a61ba71952080028d387daa6c182290 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 9.5E-112 T 17-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 FORC55_3176 7a61ba71952080028d387daa6c182290 483 Gene3D G3DSA:1.20.1080.10 4 270 2.6E-88 T 17-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 FORC55_3176 7a61ba71952080028d387daa6c182290 483 SMART SM00116 418 465 23.0 T 17-10-2018 IPR000644 CBS domain FORC55_3176 7a61ba71952080028d387daa6c182290 483 SMART SM00116 320 368 2.5E-4 T 17-10-2018 IPR000644 CBS domain FORC55_3176 7a61ba71952080028d387daa6c182290 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 17-10-2018 IPR024002 Formate/nitrite transporter, conserved site FORC55_3176 7a61ba71952080028d387daa6c182290 483 Gene3D G3DSA:3.10.580.10 306 466 2.0E-25 T 17-10-2018 FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 TIGRFAM TIGR00277 HDIG: HDIG domain 242 289 8.9E-8 T 17-10-2018 IPR006675 HDIG domain FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 Gene3D G3DSA:1.10.3210.10 15 195 3.9E-19 T 17-10-2018 FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 Gene3D G3DSA:1.10.3210.10 224 414 3.4E-54 T 17-10-2018 FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 SMART SM00471 26 155 5.5 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 SMART SM00471 240 375 8.3E-9 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 SUPERFAMILY SSF109604 16 189 5.45E-17 T 17-10-2018 FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 Pfam PF01966 HD domain 33 144 2.9E-5 T 17-10-2018 IPR006674 HD domain FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 Pfam PF01966 HD domain 244 365 1.2E-18 T 17-10-2018 IPR006674 HD domain FORC55_3321 5602877907379605fc0f0c7a78ccdcff 422 SUPERFAMILY SSF109604 236 396 3.38E-31 T 17-10-2018 FORC55_0887 e126ff8994acbd2b843a852269af681c 282 SUPERFAMILY SSF51197 9 263 4.58E-62 T 17-10-2018 FORC55_0887 e126ff8994acbd2b843a852269af681c 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 25 261 1.9E-44 T 17-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 FORC55_0887 e126ff8994acbd2b843a852269af681c 282 Gene3D G3DSA:3.60.130.10 1 277 7.5E-94 T 17-10-2018 FORC55_3065 a0f7ec1655e5d4376380a76d89d08e3d 80 Gene3D G3DSA:3.40.1620.10 1 49 4.9E-7 T 17-10-2018 FORC55_3065 a0f7ec1655e5d4376380a76d89d08e3d 80 SUPERFAMILY SSF143120 1 72 6.15E-15 T 17-10-2018 IPR036165 YefM-like superfamily FORC55_3065 a0f7ec1655e5d4376380a76d89d08e3d 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 53 3.3E-16 T 17-10-2018 FORC55_3065 a0f7ec1655e5d4376380a76d89d08e3d 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.9E-13 T 17-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM FORC55_1636 19945741b7ab4947aad25a1852c7a832 87 SUPERFAMILY SSF52833 3 82 1.54E-21 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_1636 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 66 79 2.6E-11 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_1636 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 52 65 2.6E-11 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_1636 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 3 21 2.6E-11 T 17-10-2018 IPR014025 Glutaredoxin subgroup FORC55_1636 19945741b7ab4947aad25a1852c7a832 87 Gene3D G3DSA:3.40.30.10 1 85 1.2E-25 T 17-10-2018 FORC55_1636 19945741b7ab4947aad25a1852c7a832 87 Pfam PF00462 Glutaredoxin 3 69 1.6E-16 T 17-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 FORC55_1636 19945741b7ab4947aad25a1852c7a832 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.7E-49 T 17-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 FORC55_0355 3863118388a7cd99cf10fe08237c6f8c 187 PIRSF PIRSF028513 3 185 2.9E-29 T 17-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 FORC55_0355 3863118388a7cd99cf10fe08237c6f8c 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 25.4 T 17-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 FORC55_0355 3863118388a7cd99cf10fe08237c6f8c 187 Gene3D G3DSA:2.60.450.10 59 186 4.2E-37 T 17-10-2018 FORC55_0355 3863118388a7cd99cf10fe08237c6f8c 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 7.8E-51 T 17-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related FORC55_0355 3863118388a7cd99cf10fe08237c6f8c 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 4.1E-50 T 17-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 FORC55_2171 8de29c6198fd24c3dd09c942a085a3a3 292 Pfam PF01136 Peptidase family U32 82 237 3.1E-13 T 17-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 7.1E-7 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 7.1E-7 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 7.1E-7 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 Gene3D G3DSA:3.30.450.20 7 128 2.0E-15 T 17-10-2018 FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 Gene3D G3DSA:1.10.10.10 146 215 6.0E-13 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 Pfam PF08448 PAS fold 13 124 1.5E-23 T 17-10-2018 IPR013656 PAS fold-4 FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 124 2.0E-6 T 17-10-2018 IPR000014 PAS domain FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 SMART SM00421 153 210 2.1E-7 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 3.5E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 SUPERFAMILY SSF55785 12 123 2.79E-12 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_3654 ac5dd22ea995169b0aa94450a5dab11e 246 SUPERFAMILY SSF46894 149 215 2.65E-13 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_0816 ecfa78289c46c71f1afea8ebd0f2ff13 193 Pfam PF02545 Maf-like protein 5 187 5.2E-45 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 FORC55_0816 ecfa78289c46c71f1afea8ebd0f2ff13 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 3.1E-51 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 FORC55_0816 ecfa78289c46c71f1afea8ebd0f2ff13 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.988 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 FORC55_0816 ecfa78289c46c71f1afea8ebd0f2ff13 193 SUPERFAMILY SSF52972 1 186 7.85E-56 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like FORC55_0816 ecfa78289c46c71f1afea8ebd0f2ff13 193 PIRSF PIRSF006305 1 193 1.1E-43 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 FORC55_0816 ecfa78289c46c71f1afea8ebd0f2ff13 193 Gene3D G3DSA:3.90.950.10 5 193 1.5E-56 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like FORC55_2619 45af13c97b454d7809f6fdc5ad2ae4b7 279 Gene3D G3DSA:3.40.50.150 1 279 3.5E-117 T 17-10-2018 FORC55_2619 45af13c97b454d7809f6fdc5ad2ae4b7 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_2619 45af13c97b454d7809f6fdc5ad2ae4b7 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.2E-120 T 17-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 FORC55_2619 45af13c97b454d7809f6fdc5ad2ae4b7 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.724 T 17-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 FORC55_2619 45af13c97b454d7809f6fdc5ad2ae4b7 279 SUPERFAMILY SSF53335 9 275 3.01E-97 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1459 215b7900c34c15aabd428c209e58e425 377 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 376 5.1E-165 T 17-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 PIRSF PIRSF001369 4 377 2.3E-114 T 17-10-2018 IPR024176 Citrate synthase, bacterial-type FORC55_1459 215b7900c34c15aabd428c209e58e425 377 PRINTS PR00143 Citrate synthase signature 329 343 8.6E-37 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 PRINTS PR00143 Citrate synthase signature 199 227 8.6E-37 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 PRINTS PR00143 Citrate synthase signature 177 192 8.6E-37 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 PRINTS PR00143 Citrate synthase signature 126 139 8.6E-37 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 PRINTS PR00143 Citrate synthase signature 252 272 8.6E-37 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 PRINTS PR00143 Citrate synthase signature 309 325 8.6E-37 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 SUPERFAMILY SSF48256 10 376 3.53E-123 T 17-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 ProSitePatterns PS00480 Citrate synthase signature. 259 271 - T 17-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 Pfam PF00285 Citrate synthase, C-terminal domain 11 358 2.5E-114 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 FORC55_1459 215b7900c34c15aabd428c209e58e425 377 Gene3D G3DSA:1.10.230.10 225 323 9.0E-117 T 17-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain FORC55_1459 215b7900c34c15aabd428c209e58e425 377 Gene3D G3DSA:1.10.580.10 32 356 9.0E-117 T 17-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 FORC55_2509 ba38f39fb61381c3389602eeabc84b8e 352 Gene3D G3DSA:3.10.580.10 186 315 6.7E-37 T 17-10-2018 FORC55_2509 ba38f39fb61381c3389602eeabc84b8e 352 SUPERFAMILY SSF54631 180 315 5.36E-26 T 17-10-2018 FORC55_2509 ba38f39fb61381c3389602eeabc84b8e 352 Pfam PF01595 Domain of unknown function DUF21 9 177 3.0E-28 T 17-10-2018 IPR002550 CNNM, transmembrane domain FORC55_2509 ba38f39fb61381c3389602eeabc84b8e 352 Pfam PF00571 CBS domain 260 313 2.8E-6 T 17-10-2018 IPR000644 CBS domain FORC55_1732 f1d59532cbff984e7bbcf0ca670c0350 291 SUPERFAMILY SSF53850 88 288 1.49E-38 T 17-10-2018 FORC55_1732 f1d59532cbff984e7bbcf0ca670c0350 291 SUPERFAMILY SSF46785 1 84 6.86E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1732 f1d59532cbff984e7bbcf0ca670c0350 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.8E-13 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1732 f1d59532cbff984e7bbcf0ca670c0350 291 Pfam PF03466 LysR substrate binding domain 88 285 6.4E-41 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_1732 f1d59532cbff984e7bbcf0ca670c0350 291 Gene3D G3DSA:3.40.190.290 90 291 3.8E-78 T 17-10-2018 FORC55_1732 f1d59532cbff984e7bbcf0ca670c0350 291 Gene3D G3DSA:1.10.10.10 1 89 2.3E-31 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3513 cd89f78f3e14a2a4c8f3627150a66143 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 17-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_3513 cd89f78f3e14a2a4c8f3627150a66143 342 PIRSF PIRSF001237 1 342 5.9E-144 T 17-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_3513 cd89f78f3e14a2a4c8f3627150a66143 342 Pfam PF01979 Amidohydrolase family 11 315 9.7E-19 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 FORC55_3513 cd89f78f3e14a2a4c8f3627150a66143 342 SUPERFAMILY SSF51556 1 341 2.0E-147 T 17-10-2018 IPR032466 Metal-dependent hydrolase FORC55_3513 cd89f78f3e14a2a4c8f3627150a66143 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 17-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_3513 cd89f78f3e14a2a4c8f3627150a66143 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 47.182 T 17-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_3513 cd89f78f3e14a2a4c8f3627150a66143 342 Gene3D G3DSA:3.20.20.140 2 342 6.9E-114 T 17-10-2018 FORC55_3513 cd89f78f3e14a2a4c8f3627150a66143 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 7.7E-141 T 17-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0495 8313cc2a92f8ee9f8dabd9622f49e19d 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.823 T 17-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_0495 8313cc2a92f8ee9f8dabd9622f49e19d 231 Pfam PF01048 Phosphorylase superfamily 2 227 5.4E-51 T 17-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 FORC55_0495 8313cc2a92f8ee9f8dabd9622f49e19d 231 SUPERFAMILY SSF53167 1 230 7.07E-75 T 17-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 FORC55_0495 8313cc2a92f8ee9f8dabd9622f49e19d 231 Gene3D G3DSA:3.40.50.1580 1 231 2.1E-73 T 17-10-2018 FORC55_0495 8313cc2a92f8ee9f8dabd9622f49e19d 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 7.9E-100 T 17-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_1376 9ed7fc99543679124c5da9ecb8b4c74b 266 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 124 259 1.3E-17 T 17-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 FORC55_1376 9ed7fc99543679124c5da9ecb8b4c74b 266 Gene3D G3DSA:1.10.530.10 120 262 5.0E-14 T 17-10-2018 FORC55_1028 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 17-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 FORC55_1028 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_1028 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1028 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 17-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 FORC55_1028 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 17-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 FORC55_1028 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 17-10-2018 FORC55_0556 68e69aa37db1cdcf67e9ecf6b44ec0dc 201 Gene3D G3DSA:3.40.50.880 1 201 1.0E-59 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_0556 68e69aa37db1cdcf67e9ecf6b44ec0dc 201 Pfam PF01965 DJ-1/PfpI family 3 168 3.2E-36 T 17-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 FORC55_0556 68e69aa37db1cdcf67e9ecf6b44ec0dc 201 SUPERFAMILY SSF52317 3 188 2.29E-43 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_0556 68e69aa37db1cdcf67e9ecf6b44ec0dc 201 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 181 1.7E-65 T 17-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 SUPERFAMILY SSF55073 189 349 8.63E-27 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 SMART SM00267 173 348 5.2E-22 T 17-10-2018 IPR000160 GGDEF domain FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 Gene3D G3DSA:3.20.20.450 362 612 1.6E-69 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 Gene3D G3DSA:3.30.70.270 180 361 3.7E-34 T 17-10-2018 FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 Pfam PF00563 EAL domain 365 600 4.0E-57 T 17-10-2018 IPR001633 EAL domain FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 SUPERFAMILY SSF141868 370 612 5.36E-67 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 347 3.9E-24 T 17-10-2018 IPR000160 GGDEF domain FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 SMART SM00052 358 605 1.4E-62 T 17-10-2018 IPR001633 EAL domain FORC55_0896 89e897bebe936f386bbc5d7f3ca6673f 627 Pfam PF00990 Diguanylate cyclase, GGDEF domain 184 341 9.3E-27 T 17-10-2018 IPR000160 GGDEF domain FORC55_1436 3591e2e9e73f0d3b20b2c58a4edc91dc 251 PIRSF PIRSF039085 7 250 1.3E-111 T 17-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 FORC55_1436 3591e2e9e73f0d3b20b2c58a4edc91dc 251 Gene3D G3DSA:3.40.50.300 8 251 2.5E-79 T 17-10-2018 FORC55_1436 3591e2e9e73f0d3b20b2c58a4edc91dc 251 Pfam PF00005 ABC transporter 26 174 3.9E-39 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1436 3591e2e9e73f0d3b20b2c58a4edc91dc 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1436 3591e2e9e73f0d3b20b2c58a4edc91dc 251 SUPERFAMILY SSF52540 10 244 3.68E-82 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1436 3591e2e9e73f0d3b20b2c58a4edc91dc 251 SMART SM00382 35 222 2.7E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0603 2c66459a0516f5fd43ce840cebcc3015 243 PIRSF PIRSF005650 4 243 5.2E-89 T 17-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 FORC55_0603 2c66459a0516f5fd43ce840cebcc3015 243 SUPERFAMILY SSF53633 7 240 5.37E-72 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0603 2c66459a0516f5fd43ce840cebcc3015 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.4E-102 T 17-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 FORC55_0603 2c66459a0516f5fd43ce840cebcc3015 243 Pfam PF00696 Amino acid kinase family 11 219 1.2E-26 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_0603 2c66459a0516f5fd43ce840cebcc3015 243 Gene3D G3DSA:3.40.1160.10 3 243 5.7E-76 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0603 2c66459a0516f5fd43ce840cebcc3015 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.284 T 17-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 FORC55_2695 550e51df2107cf712f8baf80e1ea0c57 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 1.5E-33 T 17-10-2018 IPR021700 Protein of unknown function DUF3283 FORC55_2919 e99c2b9ff88c76986342447038a961ab 418 Gene3D G3DSA:2.30.40.20 10 73 8.6E-35 T 17-10-2018 FORC55_2919 e99c2b9ff88c76986342447038a961ab 418 Gene3D G3DSA:1.10.150.20 171 229 1.5E-8 T 17-10-2018 FORC55_2919 e99c2b9ff88c76986342447038a961ab 418 Pfam PF11798 IMS family HHH motif 172 200 1.7E-5 T 17-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 FORC55_2919 e99c2b9ff88c76986342447038a961ab 418 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 352 5.3E-6 T 17-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 FORC55_2919 e99c2b9ff88c76986342447038a961ab 418 Gene3D G3DSA:3.30.70.270 4 156 8.6E-35 T 17-10-2018 FORC55_2919 e99c2b9ff88c76986342447038a961ab 418 SUPERFAMILY SSF56672 1 235 1.16E-63 T 17-10-2018 FORC55_2919 e99c2b9ff88c76986342447038a961ab 418 Pfam PF00817 impB/mucB/samB family 5 151 4.5E-28 T 17-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 FORC55_2919 e99c2b9ff88c76986342447038a961ab 418 Pfam PF13438 Domain of unknown function (DUF4113) 367 416 7.0E-22 T 17-10-2018 IPR025188 Domain of unknown function DUF4113 FORC55_2886 49d58da7df9aab5524f6ccc1c1a5b18e 513 Pfam PF11849 Domain of unknown function (DUF3369) 148 314 8.1E-40 T 17-10-2018 IPR021800 Domain of unknown function DUF3369 FORC55_2886 49d58da7df9aab5524f6ccc1c1a5b18e 513 SUPERFAMILY SSF52172 24 156 3.27E-11 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2886 49d58da7df9aab5524f6ccc1c1a5b18e 513 Gene3D G3DSA:3.40.50.2300 15 165 1.7E-14 T 17-10-2018 FORC55_2886 49d58da7df9aab5524f6ccc1c1a5b18e 513 Pfam PF00072 Response regulator receiver domain 28 137 2.5E-5 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2886 49d58da7df9aab5524f6ccc1c1a5b18e 513 SMART SM00471 334 471 7.0E-6 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_2886 49d58da7df9aab5524f6ccc1c1a5b18e 513 SUPERFAMILY SSF109604 324 502 2.17E-37 T 17-10-2018 FORC55_2886 49d58da7df9aab5524f6ccc1c1a5b18e 513 Gene3D G3DSA:1.10.3210.10 314 513 7.6E-68 T 17-10-2018 FORC55_2886 49d58da7df9aab5524f6ccc1c1a5b18e 513 Pfam PF01966 HD domain 340 461 5.5E-20 T 17-10-2018 IPR006674 HD domain FORC55_1404 9fd21e5678082d49254c003a84d278a1 563 Gene3D G3DSA:1.10.287.950 233 563 5.0E-68 T 17-10-2018 FORC55_1404 9fd21e5678082d49254c003a84d278a1 563 SMART SM00283 300 561 2.7E-60 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1404 9fd21e5678082d49254c003a84d278a1 563 SMART SM00304 233 285 3.9E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1404 9fd21e5678082d49254c003a84d278a1 563 SUPERFAMILY SSF58104 253 560 1.15E-66 T 17-10-2018 FORC55_1404 9fd21e5678082d49254c003a84d278a1 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 376 526 1.9E-40 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_1404 9fd21e5678082d49254c003a84d278a1 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 6.6E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1404 9fd21e5678082d49254c003a84d278a1 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 425 6.6E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1404 9fd21e5678082d49254c003a84d278a1 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 6.6E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3479 e0c5ed4bf42b587e0eff02244e20c2f5 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 1.7E-210 T 17-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 FORC55_3479 e0c5ed4bf42b587e0eff02244e20c2f5 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 17-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 FORC55_3479 e0c5ed4bf42b587e0eff02244e20c2f5 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.661 T 17-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 FORC55_3479 e0c5ed4bf42b587e0eff02244e20c2f5 397 SUPERFAMILY SSF53383 4 395 1.48E-122 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3479 e0c5ed4bf42b587e0eff02244e20c2f5 397 Pfam PF00155 Aminotransferase class I and II 43 386 2.4E-73 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_3479 e0c5ed4bf42b587e0eff02244e20c2f5 397 Gene3D G3DSA:3.40.640.10 58 296 1.3E-135 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3479 e0c5ed4bf42b587e0eff02244e20c2f5 397 Gene3D G3DSA:3.90.1150.10 40 387 1.3E-135 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1787 c0456f668a01979f7010c0569bc1cbc9 165 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 48.268 T 17-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 FORC55_1787 c0456f668a01979f7010c0569bc1cbc9 165 SUPERFAMILY SSF82679 1 100 5.49E-28 T 17-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 FORC55_1787 c0456f668a01979f7010c0569bc1cbc9 165 Gene3D G3DSA:3.30.70.940 1 164 3.9E-50 T 17-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 FORC55_1787 c0456f668a01979f7010c0569bc1cbc9 165 SMART SM00738 1 101 2.5E-29 T 17-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 FORC55_1787 c0456f668a01979f7010c0569bc1cbc9 165 SMART SM00739 112 139 0.0065 T 17-10-2018 IPR005824 KOW FORC55_1787 c0456f668a01979f7010c0569bc1cbc9 165 Pfam PF02357 Transcription termination factor nusG 2 91 3.2E-18 T 17-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 FORC55_1787 c0456f668a01979f7010c0569bc1cbc9 165 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 2.3E-74 T 17-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 FORC55_1533 db9b77c7e4c2cd6f96cf55ec685c6374 299 Gene3D G3DSA:1.10.10.60 241 298 1.5E-15 T 17-10-2018 FORC55_1533 db9b77c7e4c2cd6f96cf55ec685c6374 299 Pfam PF12833 Helix-turn-helix domain 214 293 2.0E-22 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_1533 db9b77c7e4c2cd6f96cf55ec685c6374 299 SMART SM00342 208 291 2.3E-22 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_1533 db9b77c7e4c2cd6f96cf55ec685c6374 299 SUPERFAMILY SSF46689 191 242 2.9E-8 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1533 db9b77c7e4c2cd6f96cf55ec685c6374 299 Gene3D G3DSA:1.10.10.60 189 240 7.0E-13 T 17-10-2018 FORC55_1533 db9b77c7e4c2cd6f96cf55ec685c6374 299 SUPERFAMILY SSF46689 245 295 5.82E-12 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2930 e8a178c0ee6558b33cdfdcbc2b4e8e5e 510 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 8.3E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_2930 e8a178c0ee6558b33cdfdcbc2b4e8e5e 510 Pfam PF03050 Transposase IS66 family 180 464 1.5E-100 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_2930 e8a178c0ee6558b33cdfdcbc2b4e8e5e 510 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 5.2E-13 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_2930 e8a178c0ee6558b33cdfdcbc2b4e8e5e 510 Pfam PF13817 IS66 C-terminal element 470 506 1.2E-8 T 17-10-2018 IPR039552 Transposase IS66, C-terminal FORC55_2609 3914da4adcd9851d634b4a41ae93a097 609 Gene3D G3DSA:3.40.50.300 351 604 4.4E-93 T 17-10-2018 FORC55_2609 3914da4adcd9851d634b4a41ae93a097 609 Pfam PF00005 ABC transporter 378 531 1.2E-36 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2609 3914da4adcd9851d634b4a41ae93a097 609 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2609 3914da4adcd9851d634b4a41ae93a097 609 Pfam PF00664 ABC transporter transmembrane region 41 309 5.0E-16 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 FORC55_2609 3914da4adcd9851d634b4a41ae93a097 609 SUPERFAMILY SSF52540 353 601 4.07E-89 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2609 3914da4adcd9851d634b4a41ae93a097 609 SUPERFAMILY SSF90123 31 344 2.09E-44 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_2609 3914da4adcd9851d634b4a41ae93a097 609 Gene3D G3DSA:1.20.1560.10 6 344 3.9E-23 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 FORC55_2609 3914da4adcd9851d634b4a41ae93a097 609 SMART SM00382 386 577 5.9E-20 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1197 1a66c6056a32f8455e56145f01acfb88 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 1.8E-6 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1197 1a66c6056a32f8455e56145f01acfb88 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 1.8E-6 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_1197 1a66c6056a32f8455e56145f01acfb88 457 SUPERFAMILY SSF47384 222 288 3.92E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_1197 1a66c6056a32f8455e56145f01acfb88 457 Gene3D G3DSA:3.30.565.10 308 452 1.3E-25 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1197 1a66c6056a32f8455e56145f01acfb88 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 446 2.8E-8 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1197 1a66c6056a32f8455e56145f01acfb88 457 SUPERFAMILY SSF55874 311 444 4.98E-23 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_1197 1a66c6056a32f8455e56145f01acfb88 457 Gene3D G3DSA:1.10.287.130 185 290 9.4E-9 T 17-10-2018 FORC55_1197 1a66c6056a32f8455e56145f01acfb88 457 SMART SM00387 341 448 4.9E-14 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0403 608aecf7a382752b00978547bd3d4ec9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.1E-28 T 17-10-2018 IPR009491 Protein of unknown function DUF1107 FORC55_0403 608aecf7a382752b00978547bd3d4ec9 68 Gene3D G3DSA:3.30.1910.10 1 63 2.2E-30 T 17-10-2018 FORC55_0403 608aecf7a382752b00978547bd3d4ec9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 6.0E-31 T 17-10-2018 IPR009491 Protein of unknown function DUF1107 FORC55_2286 1762fd02666a474349f857f1e4eb3d22 94 Gene3D G3DSA:1.20.5.400 22 63 1.0E-8 T 17-10-2018 FORC55_2286 1762fd02666a474349f857f1e4eb3d22 94 Pfam PF04977 Septum formation initiator 11 89 2.3E-27 T 17-10-2018 IPR007060 Septum formation initiator FtsL/DivIC FORC55_2286 1762fd02666a474349f857f1e4eb3d22 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.636 T 17-10-2018 IPR023081 Cell division protein FtsB FORC55_1690 8c0b124cac394be453be3f3badf68fb3 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 73 4.6E-14 T 17-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain FORC55_1690 8c0b124cac394be453be3f3badf68fb3 300 Gene3D G3DSA:1.10.3720.10 93 296 3.5E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1690 8c0b124cac394be453be3f3badf68fb3 300 SUPERFAMILY SSF161098 96 281 3.01E-26 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1690 8c0b124cac394be453be3f3badf68fb3 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 2.3E-26 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2377 64bb081721ecb518fda235aa19fc3ca6 256 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2377 64bb081721ecb518fda235aa19fc3ca6 256 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 23 8.8E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2377 64bb081721ecb518fda235aa19fc3ca6 256 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 6.1E-5 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_3091 60f2643c2aacabc9387c947c2f333653 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 1.4E-14 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_3091 60f2643c2aacabc9387c947c2f333653 96 Gene3D G3DSA:3.30.2310.20 1 95 8.3E-29 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily FORC55_3091 60f2643c2aacabc9387c947c2f333653 96 SUPERFAMILY SSF143011 1 82 3.53E-23 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily FORC55_3091 60f2643c2aacabc9387c947c2f333653 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 3.4E-9 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_1621 26ec8ae18c92bf6d373dd67382b73c1b 245 Pfam PF05618 Putative ATP-dependant zinc protease 107 243 1.5E-51 T 17-10-2018 FORC55_1621 26ec8ae18c92bf6d373dd67382b73c1b 245 SUPERFAMILY SSF50630 107 241 2.66E-42 T 17-10-2018 IPR021109 Aspartic peptidase domain superfamily FORC55_1621 26ec8ae18c92bf6d373dd67382b73c1b 245 Gene3D G3DSA:2.40.70.10 104 234 4.5E-42 T 17-10-2018 IPR021109 Aspartic peptidase domain superfamily FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 SUPERFAMILY SSF46589 1 114 5.75E-26 T 17-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 39.98 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 Gene3D G3DSA:3.30.930.10 107 434 9.5E-113 T 17-10-2018 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.0E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.0E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.0E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.0E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.0E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.3E-172 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 SUPERFAMILY SSF55681 118 431 1.94E-97 T 17-10-2018 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 Gene3D G3DSA:1.10.287.40 1 106 3.7E-20 T 17-10-2018 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 8.9E-29 T 17-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 5.9E-34 T 17-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_1674 8d37a7a013cd5e748a62da476398058a 435 PIRSF PIRSF001529 1 435 3.8E-190 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 FORC55_2173 7a60c95773b85f41803b306839a73ada 146 Gene3D G3DSA:1.10.10.10 5 146 7.4E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2173 7a60c95773b85f41803b306839a73ada 146 SMART SM00347 33 134 2.2E-14 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_2173 7a60c95773b85f41803b306839a73ada 146 Pfam PF01047 MarR family 41 98 6.3E-13 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_2173 7a60c95773b85f41803b306839a73ada 146 SUPERFAMILY SSF46785 20 143 5.92E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2173 7a60c95773b85f41803b306839a73ada 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 2.7E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_2173 7a60c95773b85f41803b306839a73ada 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 2.7E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_2173 7a60c95773b85f41803b306839a73ada 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 2.7E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_2173 7a60c95773b85f41803b306839a73ada 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 2.7E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_1534 4fd4bf9f5151ebb97ba5faaeafe8848d 327 Gene3D G3DSA:3.30.70.100 1 96 2.2E-32 T 17-10-2018 FORC55_1534 4fd4bf9f5151ebb97ba5faaeafe8848d 327 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 44.969 T 17-10-2018 IPR020936 Uncharacterised protein family UPF0176 FORC55_1534 4fd4bf9f5151ebb97ba5faaeafe8848d 327 Gene3D G3DSA:3.40.250.10 97 253 8.9E-51 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_1534 4fd4bf9f5151ebb97ba5faaeafe8848d 327 SUPERFAMILY SSF52821 94 237 1.02E-30 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_1534 4fd4bf9f5151ebb97ba5faaeafe8848d 327 Pfam PF00581 Rhodanese-like domain 118 210 5.2E-8 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_1534 4fd4bf9f5151ebb97ba5faaeafe8848d 327 SMART SM00450 113 214 3.0E-21 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3482 2bc13412f0f804ead6a1ca2c3b500843 127 Gene3D G3DSA:3.10.180.10 7 126 4.1E-32 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_3482 2bc13412f0f804ead6a1ca2c3b500843 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 5.5E-22 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain FORC55_3482 2bc13412f0f804ead6a1ca2c3b500843 127 SUPERFAMILY SSF54593 1 126 8.06E-33 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_3475 80b18e176d1790c29d5e8c286234538b 70 Gene3D G3DSA:2.40.50.140 2 70 8.4E-27 T 17-10-2018 FORC55_3475 80b18e176d1790c29d5e8c286234538b 70 PIRSF PIRSF002599 1 70 1.4E-23 T 17-10-2018 IPR012156 Cold shock, CspA GO:0003676 FORC55_3475 80b18e176d1790c29d5e8c286234538b 70 SUPERFAMILY SSF50249 4 69 8.36E-24 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_3475 80b18e176d1790c29d5e8c286234538b 70 SMART SM00357 6 70 5.1E-28 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_3475 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 43 61 1.4E-15 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_3475 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 28 37 1.4E-15 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_3475 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-15 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_3475 80b18e176d1790c29d5e8c286234538b 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 4.0E-26 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_2936 18c2bce6e716e651b4e479afd753cd96 651 Gene3D G3DSA:3.40.50.300 4 178 7.0E-7 T 17-10-2018 FORC55_2936 18c2bce6e716e651b4e479afd753cd96 651 SUPERFAMILY SSF52540 118 263 4.6E-5 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2936 18c2bce6e716e651b4e479afd753cd96 651 SUPERFAMILY SSF52540 11 161 2.76E-9 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0840 45f8caffa577b74b8ec52e14ddde6339 334 Pfam PF11059 Protein of unknown function (DUF2860) 32 333 2.0E-108 T 17-10-2018 IPR016896 Protein of unknown function DUF2860 FORC55_0840 45f8caffa577b74b8ec52e14ddde6339 334 PIRSF PIRSF028696 1 334 2.1E-134 T 17-10-2018 IPR016896 Protein of unknown function DUF2860 FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 SUPERFAMILY SSF53850 92 299 5.07E-29 T 17-10-2018 FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.6E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.6E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.6E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 Pfam PF03466 LysR substrate binding domain 91 296 1.1E-28 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 Gene3D G3DSA:1.10.10.10 5 98 5.4E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 SUPERFAMILY SSF46785 9 113 1.92E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 Gene3D G3DSA:3.40.190.10 162 270 5.9E-47 T 17-10-2018 FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 Gene3D G3DSA:3.40.190.10 102 293 5.9E-47 T 17-10-2018 FORC55_1960 24ea4fb719c6f8877072e7e1a71a660d 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.1E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1783 3b5b2dafe1f44d1c62631c270f65d408 378 SUPERFAMILY SSF51556 54 347 3.77E-102 T 17-10-2018 IPR032466 Metal-dependent hydrolase FORC55_1783 3b5b2dafe1f44d1c62631c270f65d408 378 SUPERFAMILY SSF51338 1 53 3.6E-18 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 FORC55_1783 3b5b2dafe1f44d1c62631c270f65d408 378 Gene3D G3DSA:3.20.20.140 55 341 3.8E-149 T 17-10-2018 FORC55_1783 3b5b2dafe1f44d1c62631c270f65d408 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 1.4E-157 T 17-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 FORC55_1783 3b5b2dafe1f44d1c62631c270f65d408 378 Gene3D G3DSA:2.30.40.10 6 373 3.8E-149 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 FORC55_1783 3b5b2dafe1f44d1c62631c270f65d408 378 Pfam PF01979 Amidohydrolase family 51 374 8.0E-40 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 FORC55_1783 3b5b2dafe1f44d1c62631c270f65d408 378 PIRSF PIRSF038994 1 378 2.8E-124 T 17-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:1.20.58.1480 119 244 2.3E-44 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 SMART SM00382 347 491 1.1E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 1.1E-17 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:1.10.8.60 490 583 1.2E-32 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 SUPERFAMILY SSF52540 313 586 1.14E-50 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 SUPERFAMILY SSF54211 594 769 7.97E-60 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 17-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.8E-40 T 17-10-2018 IPR003111 Lon, substrate-binding domain FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Hamap MF_01973 Lon protease [lon]. 11 771 72.293 T 17-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:3.30.230.10 584 771 2.4E-86 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 17-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.2E-56 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.2E-56 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.2E-56 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.2E-56 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.2E-56 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 1.0E-99 T 17-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 SMART SM00464 10 201 2.6E-76 T 17-10-2018 IPR003111 Lon, substrate-binding domain FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:3.40.50.300 312 489 3.5E-61 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 SUPERFAMILY SSF88697 10 200 1.19E-48 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:2.30.130.40 1 116 1.6E-35 T 17-10-2018 FORC55_0908 a13265778d972b64f53902c49a1ced3f 786 PIRSF PIRSF001174 1 774 0.0 T 17-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 FORC55_0336 038b0c639673285d4abbbda7f52441f0 1254 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 917 1253 4.3E-62 T 17-10-2018 IPR007452 Translocation and assembly module TamB FORC55_1183 e652c206fb25a5bcf9b6ef41c2509fa2 287 SUPERFAMILY SSF103481 40 141 2.35E-10 T 17-10-2018 FORC55_1183 e652c206fb25a5bcf9b6ef41c2509fa2 287 Pfam PF00892 EamA-like transporter family 149 278 3.0E-19 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_1183 e652c206fb25a5bcf9b6ef41c2509fa2 287 Pfam PF00892 EamA-like transporter family 7 137 8.9E-11 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_1183 e652c206fb25a5bcf9b6ef41c2509fa2 287 SUPERFAMILY SSF103481 181 279 1.96E-11 T 17-10-2018 FORC55_1894 0ef57253e662db2243d128ef42382da5 214 SUPERFAMILY SSF158682 71 212 5.23E-27 T 17-10-2018 IPR029024 TerB-like FORC55_1894 0ef57253e662db2243d128ef42382da5 214 Gene3D G3DSA:1.10.3680.10 95 213 4.2E-11 T 17-10-2018 IPR029024 TerB-like FORC55_1894 0ef57253e662db2243d128ef42382da5 214 Pfam PF04391 Protein of unknown function (DUF533) 37 211 1.4E-63 T 17-10-2018 IPR007486 Inner membrane protein YebE FORC55_1154 86275a8e746731a88dc1e3daa91a4f02 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.9E-15 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_1154 86275a8e746731a88dc1e3daa91a4f02 331 SUPERFAMILY SSF52540 3 268 2.02E-49 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1154 86275a8e746731a88dc1e3daa91a4f02 331 SMART SM00382 32 237 6.7E-4 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1154 86275a8e746731a88dc1e3daa91a4f02 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 323 3.3E-20 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_1154 86275a8e746731a88dc1e3daa91a4f02 331 Pfam PF00005 ABC transporter 24 187 2.9E-26 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1154 86275a8e746731a88dc1e3daa91a4f02 331 Gene3D G3DSA:3.40.50.300 2 329 3.5E-72 T 17-10-2018 FORC55_1200 104b68ad1444e9e6be67908a22d07d9b 594 SUPERFAMILY SSF52540 49 362 1.01E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1200 104b68ad1444e9e6be67908a22d07d9b 594 Pfam PF00271 Helicase conserved C-terminal domain 239 342 3.5E-14 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_1200 104b68ad1444e9e6be67908a22d07d9b 594 SUPERFAMILY SSF57829 425 465 2.01E-6 T 17-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 FORC55_1200 104b68ad1444e9e6be67908a22d07d9b 594 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.9E-23 T 17-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 FORC55_1200 104b68ad1444e9e6be67908a22d07d9b 594 Gene3D G3DSA:3.40.50.300 1 166 1.2E-28 T 17-10-2018 FORC55_1200 104b68ad1444e9e6be67908a22d07d9b 594 SMART SM00487 1 178 2.6E-13 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_1200 104b68ad1444e9e6be67908a22d07d9b 594 Gene3D G3DSA:3.40.50.300 207 367 2.4E-33 T 17-10-2018 FORC55_1200 104b68ad1444e9e6be67908a22d07d9b 594 SMART SM00490 265 344 6.0E-12 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_0681 5f45d1ae03ac422ca041ae8487c51bfa 160 PIRSF PIRSF006181 1 159 4.6E-55 T 17-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC FORC55_0681 5f45d1ae03ac422ca041ae8487c51bfa 160 Pfam PF04073 Aminoacyl-tRNA editing domain 32 147 2.1E-26 T 17-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 FORC55_0681 5f45d1ae03ac422ca041ae8487c51bfa 160 Gene3D G3DSA:3.90.960.10 1 159 6.3E-61 T 17-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 FORC55_0681 5f45d1ae03ac422ca041ae8487c51bfa 160 SUPERFAMILY SSF55826 2 157 6.54E-46 T 17-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 FORC55_0681 5f45d1ae03ac422ca041ae8487c51bfa 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 3.8E-60 T 17-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 Gene3D G3DSA:2.170.8.10 49 351 2.1E-235 T 17-10-2018 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 Gene3D G3DSA:3.90.228.20 236 526 2.1E-235 T 17-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 4.3E-210 T 17-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 541 1.0E-278 T 17-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 Gene3D G3DSA:3.40.449.10 26 235 2.1E-235 T 17-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 SUPERFAMILY SSF53795 230 541 1.19E-127 T 17-10-2018 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.735 T 17-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 SUPERFAMILY SSF68923 11 228 3.14E-87 T 17-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 PIRSF PIRSF006294 4 541 8.6E-226 T 17-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 FORC55_0148 d47a6918e7fa5233e68af8382a43aa98 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 17-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 FORC55_0493 c402b500376b7c24621f4115dab09c30 276 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 4 274 51.489 T 17-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 FORC55_0493 c402b500376b7c24621f4115dab09c30 276 Gene3D G3DSA:3.40.50.1980 25 142 5.0E-36 T 17-10-2018 FORC55_0493 c402b500376b7c24621f4115dab09c30 276 Gene3D G3DSA:3.40.50.1980 145 272 1.6E-31 T 17-10-2018 FORC55_0493 c402b500376b7c24621f4115dab09c30 276 Pfam PF01497 Periplasmic binding protein 28 249 3.1E-30 T 17-10-2018 IPR002491 ABC transporter periplasmic binding domain FORC55_0493 c402b500376b7c24621f4115dab09c30 276 SUPERFAMILY SSF53807 24 270 2.71E-59 T 17-10-2018 FORC55_0748 86d0cdd279a2389871f31c2a8c400d46 175 Gene3D G3DSA:3.40.50.360 3 175 1.8E-57 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0748 86d0cdd279a2389871f31c2a8c400d46 175 PIRSF PIRSF038996 1 172 7.2E-69 T 17-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 FORC55_0748 86d0cdd279a2389871f31c2a8c400d46 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 17-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 FORC55_0748 86d0cdd279a2389871f31c2a8c400d46 175 SUPERFAMILY SSF52218 4 171 3.57E-53 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0748 86d0cdd279a2389871f31c2a8c400d46 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 6.6E-74 T 17-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 FORC55_0748 86d0cdd279a2389871f31c2a8c400d46 175 Pfam PF00258 Flavodoxin 6 160 3.1E-33 T 17-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 FORC55_0060 81196c5455af3abfa12e390182d84956 295 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 3.9E-72 T 17-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 FORC55_0060 81196c5455af3abfa12e390182d84956 295 SUPERFAMILY SSF103481 183 277 1.31E-6 T 17-10-2018 FORC55_0060 81196c5455af3abfa12e390182d84956 295 SUPERFAMILY SSF103481 35 131 3.14E-5 T 17-10-2018 FORC55_0060 81196c5455af3abfa12e390182d84956 295 Pfam PF00892 EamA-like transporter family 139 277 5.9E-8 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 Gene3D G3DSA:2.40.50.140 1 124 3.5E-63 T 17-10-2018 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.5E-70 T 17-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 PIRSF PIRSF002133 1 124 8.5E-54 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.557 T 17-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.1E-60 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.1E-60 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.1E-60 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.1E-60 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.1E-60 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.1E-60 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.2E-42 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2425 e7c5a46bfe4c3264e7058a488094437b 124 SUPERFAMILY SSF50249 3 123 1.03E-51 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2122 9b664b29fa5b85d12412f773c78fa7c1 248 SMART SM00479 57 238 2.9E-25 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_2122 9b664b29fa5b85d12412f773c78fa7c1 248 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 53 240 1.0E-21 T 17-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2122 9b664b29fa5b85d12412f773c78fa7c1 248 SUPERFAMILY SSF53098 57 238 1.83E-38 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2122 9b664b29fa5b85d12412f773c78fa7c1 248 Gene3D G3DSA:3.30.420.10 52 241 5.9E-34 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_2122 9b664b29fa5b85d12412f773c78fa7c1 248 Pfam PF00929 Exonuclease 59 229 3.7E-16 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_2702 260a9b0632077d84170c403a7252369e 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 2.6E-126 T 17-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 FORC55_2702 260a9b0632077d84170c403a7252369e 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 715 6.2E-195 T 17-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 FORC55_2702 260a9b0632077d84170c403a7252369e 726 SUPERFAMILY SSF51445 160 718 4.57E-149 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_2702 260a9b0632077d84170c403a7252369e 726 Gene3D G3DSA:3.20.20.80 173 717 6.3E-120 T 17-10-2018 FORC55_0922 a9f597a2aab43d7c0fd1a78dee6b0ca1 273 Pfam PF00005 ABC transporter 31 180 3.4E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0922 a9f597a2aab43d7c0fd1a78dee6b0ca1 273 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0922 a9f597a2aab43d7c0fd1a78dee6b0ca1 273 Gene3D G3DSA:3.40.50.300 2 273 2.4E-85 T 17-10-2018 FORC55_0922 a9f597a2aab43d7c0fd1a78dee6b0ca1 273 SUPERFAMILY SSF52540 4 253 6.5E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0922 a9f597a2aab43d7c0fd1a78dee6b0ca1 273 SMART SM00382 39 239 2.6E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1968 2159e3036940537d6995176f0664b356 436 Gene3D G3DSA:3.30.559.30 191 436 2.6E-47 T 17-10-2018 FORC55_1968 2159e3036940537d6995176f0664b356 436 SUPERFAMILY SSF52777 4 170 3.11E-30 T 17-10-2018 FORC55_1968 2159e3036940537d6995176f0664b356 436 SUPERFAMILY SSF52777 177 418 2.56E-28 T 17-10-2018 FORC55_1968 2159e3036940537d6995176f0664b356 436 Gene3D G3DSA:3.30.559.10 1 186 4.4E-59 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 FORC55_1968 2159e3036940537d6995176f0664b356 436 Pfam PF00668 Condensation domain 4 410 1.3E-41 T 17-10-2018 IPR001242 Condensation domain FORC55_2513 f6c36e094d06c2afab4f28142cf7f878 190 SMART SM00986 26 182 2.1E-29 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_2513 f6c36e094d06c2afab4f28142cf7f878 190 Gene3D G3DSA:3.40.470.10 1 190 2.5E-72 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_2513 f6c36e094d06c2afab4f28142cf7f878 190 SMART SM00987 26 182 2.1E-29 T 17-10-2018 FORC55_2513 f6c36e094d06c2afab4f28142cf7f878 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 3.5E-26 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_2513 f6c36e094d06c2afab4f28142cf7f878 190 SUPERFAMILY SSF52141 2 189 2.88E-57 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 304 5.5E-105 T 17-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 Gene3D G3DSA:1.10.3210.10 308 500 8.3E-58 T 17-10-2018 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 PIRSF PIRSF001267 1 500 3.5E-204 T 17-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 SUPERFAMILY SSF53067 135 307 1.3E-47 T 17-10-2018 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 SUPERFAMILY SSF53067 11 131 1.41E-36 T 17-10-2018 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 Gene3D G3DSA:3.30.420.40 12 301 2.0E-93 T 17-10-2018 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 SUPERFAMILY SSF109604 311 499 6.91E-48 T 17-10-2018 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 Pfam PF02541 Ppx/GppA phosphatase family 24 306 1.5E-86 T 17-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 FORC55_2018 af5a32a801549ff390cc97b72e2d0e72 500 Gene3D G3DSA:3.30.420.150 115 293 2.0E-93 T 17-10-2018 FORC55_2814 221d50c7aa88483c11239d1b0b30705e 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 8.8E-13 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 FORC55_2814 221d50c7aa88483c11239d1b0b30705e 212 Gene3D G3DSA:1.20.1050.10 80 171 1.0E-24 T 17-10-2018 FORC55_2814 221d50c7aa88483c11239d1b0b30705e 212 SUPERFAMILY SSF52833 1 81 6.87E-13 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_2814 221d50c7aa88483c11239d1b0b30705e 212 Gene3D G3DSA:3.40.30.10 2 79 1.0E-24 T 17-10-2018 FORC55_1705 66ec6b6ec85cc35de8ca5f7206871a5e 262 Pfam PF12833 Helix-turn-helix domain 180 254 1.3E-15 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_1705 66ec6b6ec85cc35de8ca5f7206871a5e 262 Gene3D G3DSA:1.10.10.60 152 259 2.3E-21 T 17-10-2018 FORC55_1705 66ec6b6ec85cc35de8ca5f7206871a5e 262 SMART SM00342 172 253 2.9E-18 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_1705 66ec6b6ec85cc35de8ca5f7206871a5e 262 SUPERFAMILY SSF46689 207 255 8.96E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1705 66ec6b6ec85cc35de8ca5f7206871a5e 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 FORC55_3500 aa908bc45b333021522df50fea074325 244 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 181 8.0E-5 T 17-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 FORC55_3500 aa908bc45b333021522df50fea074325 244 PRINTS PR01374 Gram-negative bacterial tonB protein signature 91 101 8.0E-5 T 17-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 FORC55_3500 aa908bc45b333021522df50fea074325 244 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 165 242 2.9E-25 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 FORC55_3500 aa908bc45b333021522df50fea074325 244 Gene3D G3DSA:3.30.1150.10 148 243 5.1E-24 T 17-10-2018 FORC55_3500 aa908bc45b333021522df50fea074325 244 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 166 242 1.9E-25 T 17-10-2018 IPR006260 TonB/TolA, C-terminal FORC55_3500 aa908bc45b333021522df50fea074325 244 SUPERFAMILY SSF74653 162 240 1.83E-24 T 17-10-2018 FORC55_0598 88d5cc31aa58ae2780ff9a658c6135ba 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 5.3E-55 T 17-10-2018 IPR020911 Uncharacterised protein family UPF0325 FORC55_0598 88d5cc31aa58ae2780ff9a658c6135ba 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 30.616 T 17-10-2018 IPR020911 Uncharacterised protein family UPF0325 FORC55_0598 88d5cc31aa58ae2780ff9a658c6135ba 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 9.0E-68 T 17-10-2018 IPR020911 Uncharacterised protein family UPF0325 FORC55_0171 6a2eb83e61c09487e9c4c0c41bfcac9c 254 SMART SM00421 190 248 7.5E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0171 6a2eb83e61c09487e9c4c0c41bfcac9c 254 Gene3D G3DSA:1.10.10.10 168 252 6.3E-16 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0171 6a2eb83e61c09487e9c4c0c41bfcac9c 254 ProSitePatterns PS00622 LuxR-type HTH domain signature. 207 234 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0171 6a2eb83e61c09487e9c4c0c41bfcac9c 254 Pfam PF00196 Bacterial regulatory proteins, luxR family 192 240 6.0E-13 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0171 6a2eb83e61c09487e9c4c0c41bfcac9c 254 SUPERFAMILY SSF46894 186 240 1.53E-14 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_0171 6a2eb83e61c09487e9c4c0c41bfcac9c 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 223 1.2E-9 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0171 6a2eb83e61c09487e9c4c0c41bfcac9c 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 207 1.2E-9 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_0171 6a2eb83e61c09487e9c4c0c41bfcac9c 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 223 235 1.2E-9 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2678 56ad90489cea66cae927059aad295061 552 Pfam PF06048 Domain of unknown function (DUF927) 15 278 5.1E-59 T 17-10-2018 IPR009270 Domain of unknown function DUF927 FORC55_1876 6533724887dec4df87c021263bd8d182 318 Gene3D G3DSA:3.30.1330.60 153 301 1.8E-49 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1876 6533724887dec4df87c021263bd8d182 318 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 57 9.3E-18 T 17-10-2018 IPR025713 Motility protein B, N-terminal domain FORC55_1876 6533724887dec4df87c021263bd8d182 318 SUPERFAMILY SSF103088 183 299 6.02E-28 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1876 6533724887dec4df87c021263bd8d182 318 Pfam PF00691 OmpA family 195 293 8.3E-16 T 17-10-2018 IPR006665 OmpA-like domain FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 Gene3D G3DSA:3.30.1360.80 1 172 1.9E-73 T 17-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.2E-51 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.2E-51 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.2E-51 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.2E-51 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.2E-51 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 2.0E-61 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 PIRSF PIRSF006160 1 162 3.3E-66 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 SUPERFAMILY SSF63411 4 162 1.47E-65 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.326 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2259 8e7a5d270231c144832eea4aca1b0e85 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 7.0E-84 T 17-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 FORC55_2003 08188fc19015e59859f795999944aa30 379 Gene3D G3DSA:3.20.20.105 1 370 5.1E-175 T 17-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 FORC55_2003 08188fc19015e59859f795999944aa30 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 1.4E-187 T 17-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 FORC55_2003 08188fc19015e59859f795999944aa30 379 SUPERFAMILY SSF51713 3 366 8.89E-165 T 17-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 FORC55_2003 08188fc19015e59859f795999944aa30 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.682 T 17-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 FORC55_2003 08188fc19015e59859f795999944aa30 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.5E-96 T 17-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 FORC55_2003 08188fc19015e59859f795999944aa30 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 1.9E-178 T 17-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 FORC55_1380 326d209be28a829f3ce342de5eee6cdc 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 5.4E-19 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1380 326d209be28a829f3ce342de5eee6cdc 256 Gene3D G3DSA:1.10.3720.10 4 256 2.8E-48 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1380 326d209be28a829f3ce342de5eee6cdc 256 SUPERFAMILY SSF161098 5 254 2.8E-55 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1997 06579f700febeb4b67b81a9d202d18df 244 Gene3D G3DSA:3.40.1280.10 1 165 1.8E-62 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_1997 06579f700febeb4b67b81a9d202d18df 244 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 240 8.5E-83 T 17-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 FORC55_1997 06579f700febeb4b67b81a9d202d18df 244 Pfam PF00588 SpoU rRNA Methylase family 6 155 6.4E-33 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 FORC55_1997 06579f700febeb4b67b81a9d202d18df 244 PIRSF PIRSF004808 1 244 2.7E-72 T 17-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 FORC55_1997 06579f700febeb4b67b81a9d202d18df 244 SUPERFAMILY SSF75217 6 167 1.44E-36 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_1997 06579f700febeb4b67b81a9d202d18df 244 Gene3D G3DSA:1.10.8.590 174 244 1.6E-30 T 17-10-2018 FORC55_0201 869fe37418d4ea37e19941ca86152e3e 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 5.7E-68 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 FORC55_0201 869fe37418d4ea37e19941ca86152e3e 301 SUPERFAMILY SSF161111 8 207 3.92E-50 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily FORC55_0201 869fe37418d4ea37e19941ca86152e3e 301 Gene3D G3DSA:3.30.70.1350 207 290 4.4E-31 T 17-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 FORC55_0201 869fe37418d4ea37e19941ca86152e3e 301 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 1.2E-26 T 17-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain FORC55_0201 869fe37418d4ea37e19941ca86152e3e 301 SUPERFAMILY SSF160240 210 287 6.15E-24 T 17-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 FORC55_0201 869fe37418d4ea37e19941ca86152e3e 301 Gene3D G3DSA:1.20.1510.10 8 206 3.8E-59 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily FORC55_0201 869fe37418d4ea37e19941ca86152e3e 301 Pfam PF01545 Cation efflux family 15 206 2.9E-41 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 FORC55_2008 26f1c4ad8bdd897a8d6148a28e93b93b 545 SUPERFAMILY SSF51645 17 544 5.23E-186 T 17-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 FORC55_2008 26f1c4ad8bdd897a8d6148a28e93b93b 545 ProSitePatterns PS00510 Malate synthase signature. 278 293 - T 17-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 FORC55_2008 26f1c4ad8bdd897a8d6148a28e93b93b 545 PIRSF PIRSF001363 13 545 1.5E-251 T 17-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 FORC55_2008 26f1c4ad8bdd897a8d6148a28e93b93b 545 Gene3D G3DSA:1.20.1220.12 424 545 2.0E-48 T 17-10-2018 FORC55_2008 26f1c4ad8bdd897a8d6148a28e93b93b 545 Gene3D G3DSA:3.20.20.360 13 423 5.3E-188 T 17-10-2018 FORC55_2008 26f1c4ad8bdd897a8d6148a28e93b93b 545 Pfam PF01274 Malate synthase 24 544 1.6E-197 T 17-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 FORC55_2008 26f1c4ad8bdd897a8d6148a28e93b93b 545 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 35 544 4.3E-274 T 17-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 FORC55_3671 cf5532dd2a0b5c195ce40321ce09c8c8 101 Pfam PF00072 Response regulator receiver domain 4 95 2.1E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3671 cf5532dd2a0b5c195ce40321ce09c8c8 101 SUPERFAMILY SSF52172 1 94 3.27E-28 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_3671 cf5532dd2a0b5c195ce40321ce09c8c8 101 SMART SM00448 2 97 2.2E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3671 cf5532dd2a0b5c195ce40321ce09c8c8 101 Gene3D G3DSA:3.40.50.12740 1 97 1.2E-29 T 17-10-2018 FORC55_1802 2190742ab146549367a917a79257c172 252 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 25 207 5.5E-38 T 17-10-2018 IPR018635 Uncharacterised protein family UPF0319 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 SUPERFAMILY SSF48557 5 455 2.98E-137 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 Gene3D G3DSA:1.10.40.30 403 461 8.3E-19 T 17-10-2018 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.1E-31 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_1258 4463e5b51ee92a762f508734896391fd 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.1E-31 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_1258 4463e5b51ee92a762f508734896391fd 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.1E-31 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_1258 4463e5b51ee92a762f508734896391fd 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.1E-31 T 17-10-2018 IPR000362 Fumarate lyase family FORC55_1258 4463e5b51ee92a762f508734896391fd 461 Gene3D G3DSA:1.10.275.10 6 133 9.0E-50 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal FORC55_1258 4463e5b51ee92a762f508734896391fd 461 Gene3D G3DSA:1.20.200.10 134 400 1.6E-98 T 17-10-2018 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 Pfam PF00206 Lyase 13 337 1.8E-93 T 17-10-2018 IPR022761 Fumarate lyase, N-terminal FORC55_1258 4463e5b51ee92a762f508734896391fd 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.241 T 17-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 17-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.3E-6 T 17-10-2018 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.3E-6 T 17-10-2018 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.3E-6 T 17-10-2018 FORC55_1258 4463e5b51ee92a762f508734896391fd 461 Pfam PF10415 Fumarase C C-terminus 403 455 3.5E-18 T 17-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 FORC55_0069 34acabd7f9ee993b60cd89d00a387bd6 207 SUPERFAMILY SSF55718 21 123 1.15E-9 T 17-10-2018 IPR036527 SCP2 sterol-binding domain superfamily FORC55_0069 34acabd7f9ee993b60cd89d00a387bd6 207 Pfam PF02036 SCP-2 sterol transfer family 21 117 6.6E-20 T 17-10-2018 IPR003033 SCP2 sterol-binding domain FORC55_0275 885586d06ea21ae201c25747274dc730 638 SMART SM00382 337 503 4.7E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0275 885586d06ea21ae201c25747274dc730 638 SMART SM00382 26 223 2.2E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0275 885586d06ea21ae201c25747274dc730 638 Pfam PF00005 ABC transporter 328 459 6.8E-25 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0275 885586d06ea21ae201c25747274dc730 638 Pfam PF12848 ABC transporter 217 295 2.1E-28 T 17-10-2018 IPR032781 ABC-transporter extension domain FORC55_0275 885586d06ea21ae201c25747274dc730 638 SUPERFAMILY SSF52540 277 494 5.97E-44 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0275 885586d06ea21ae201c25747274dc730 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0275 885586d06ea21ae201c25747274dc730 638 Gene3D G3DSA:3.40.50.300 7 273 4.6E-59 T 17-10-2018 FORC55_0275 885586d06ea21ae201c25747274dc730 638 Pfam PF09496 Cenp-O kinetochore centromere component 534 627 5.0E-4 T 17-10-2018 IPR018464 Centromere protein O GO:0000776|GO:0034508 Reactome: R-HSA-141444|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-5663220|Reactome: R-HSA-606279|Reactome: R-HSA-68877 FORC55_0275 885586d06ea21ae201c25747274dc730 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0275 885586d06ea21ae201c25747274dc730 638 Pfam PF00005 ABC transporter 17 178 1.1E-19 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0275 885586d06ea21ae201c25747274dc730 638 SUPERFAMILY SSF52540 2 255 7.3E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0275 885586d06ea21ae201c25747274dc730 638 Gene3D G3DSA:3.40.50.300 276 540 6.7E-54 T 17-10-2018 FORC55_0873 fef6053f23e3351a9420d17b949af56b 107 SUPERFAMILY SSF158757 8 85 3.66E-35 T 17-10-2018 IPR036810 SMc04008-like superfamily FORC55_0873 fef6053f23e3351a9420d17b949af56b 107 Gene3D G3DSA:1.10.3340.10 5 107 4.0E-44 T 17-10-2018 IPR036810 SMc04008-like superfamily FORC55_0873 fef6053f23e3351a9420d17b949af56b 107 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 3.5E-35 T 17-10-2018 IPR023163 SMc04008-like domain FORC55_3564 2414a8a059165f28febb9badf61f7d71 206 SUPERFAMILY SSF53850 4 204 1.41E-21 T 17-10-2018 FORC55_3564 2414a8a059165f28febb9badf61f7d71 206 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 201 3.1E-9 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3564 2414a8a059165f28febb9badf61f7d71 206 Gene3D G3DSA:3.40.190.10 66 167 2.8E-12 T 17-10-2018 FORC55_3564 2414a8a059165f28febb9badf61f7d71 206 Gene3D G3DSA:3.40.190.10 4 198 2.8E-12 T 17-10-2018 FORC55_1651 082f37c483573045e44051b75b776af3 431 SUPERFAMILY SSF53720 4 424 6.47E-91 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_1651 082f37c483573045e44051b75b776af3 431 PIRSF PIRSF000099 1 427 1.8E-168 T 17-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 Pfam PF00815 Histidinol dehydrogenase 26 424 3.4E-170 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 17-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 5.9E-101 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 5.9E-101 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 5.9E-101 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 5.9E-101 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 5.9E-101 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 5.9E-101 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 5.9E-101 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 5.9E-101 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 Gene3D G3DSA:3.40.50.1980 231 346 1.4E-125 T 17-10-2018 FORC55_1651 082f37c483573045e44051b75b776af3 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 1.2E-164 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.04 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 FORC55_1651 082f37c483573045e44051b75b776af3 431 Gene3D G3DSA:3.40.50.1980 30 229 1.4E-125 T 17-10-2018 FORC55_3663 64a0f63739627c518906b0807fb6d4a6 385 SMART SM00283 79 361 3.3E-5 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3663 64a0f63739627c518906b0807fb6d4a6 385 Gene3D G3DSA:1.10.287.950 60 370 1.9E-34 T 17-10-2018 FORC55_3663 64a0f63739627c518906b0807fb6d4a6 385 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 166 313 7.0E-25 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3663 64a0f63739627c518906b0807fb6d4a6 385 SUPERFAMILY SSF58104 96 345 2.88E-35 T 17-10-2018 FORC55_3663 64a0f63739627c518906b0807fb6d4a6 385 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 217 246 7.3E-16 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3663 64a0f63739627c518906b0807fb6d4a6 385 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 29 7.3E-16 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3663 64a0f63739627c518906b0807fb6d4a6 385 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 215 7.3E-16 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3481 c411c41b149c7e0e9434063af1739715 312 SUPERFAMILY SSF53850 95 303 7.45E-39 T 17-10-2018 FORC55_3481 c411c41b149c7e0e9434063af1739715 312 Gene3D G3DSA:3.40.190.10 98 298 8.3E-58 T 17-10-2018 FORC55_3481 c411c41b149c7e0e9434063af1739715 312 Pfam PF03466 LysR substrate binding domain 94 301 1.2E-40 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3481 c411c41b149c7e0e9434063af1739715 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 7.0E-20 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3481 c411c41b149c7e0e9434063af1739715 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3481 c411c41b149c7e0e9434063af1739715 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3481 c411c41b149c7e0e9434063af1739715 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3481 c411c41b149c7e0e9434063af1739715 312 Gene3D G3DSA:3.40.190.10 169 270 8.3E-58 T 17-10-2018 FORC55_3481 c411c41b149c7e0e9434063af1739715 312 SUPERFAMILY SSF46785 11 90 4.99E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3481 c411c41b149c7e0e9434063af1739715 312 Gene3D G3DSA:1.10.10.10 9 95 4.7E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0080 5201e325fe7ff337083eb6f932396137 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.893 T 17-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 FORC55_0080 5201e325fe7ff337083eb6f932396137 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.3E-67 T 17-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 FORC55_0080 5201e325fe7ff337083eb6f932396137 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 4.0E-106 T 17-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 FORC55_0080 5201e325fe7ff337083eb6f932396137 284 Gene3D G3DSA:1.20.120.1780 167 284 5.4E-13 T 17-10-2018 FORC55_0080 5201e325fe7ff337083eb6f932396137 284 Gene3D G3DSA:1.10.357.140 19 166 1.4E-42 T 17-10-2018 FORC55_3527 bd10cfc35fb6a102e970f8d037a0adfd 88 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 79 3.5E-13 T 17-10-2018 IPR000160 GGDEF domain FORC55_3527 bd10cfc35fb6a102e970f8d037a0adfd 88 Gene3D G3DSA:3.30.70.270 1 88 1.2E-20 T 17-10-2018 FORC55_3527 bd10cfc35fb6a102e970f8d037a0adfd 88 SUPERFAMILY SSF55073 2 85 2.28E-18 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3527 bd10cfc35fb6a102e970f8d037a0adfd 88 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 4 81 3.8E-14 T 17-10-2018 IPR000160 GGDEF domain FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 Gene3D G3DSA:1.10.1900.20 56 117 7.9E-29 T 17-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 SUPERFAMILY SSF74731 2 116 1.7E-50 T 17-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 Gene3D G3DSA:1.10.720.90 2 55 4.2E-25 T 17-10-2018 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 7.0E-22 T 17-10-2018 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.787 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 Pfam PF00453 Ribosomal protein L20 3 108 4.3E-49 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2992 283a469141a3d2bf42a207d6dd769034 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.5E-52 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1162 7f51dc179145d0bc11ea5c7df3452b6e 343 SUPERFAMILY SSF111369 46 264 5.1E-31 T 17-10-2018 FORC55_1162 7f51dc179145d0bc11ea5c7df3452b6e 343 Gene3D G3DSA:2.40.30.170 43 267 1.3E-74 T 17-10-2018 FORC55_1162 7f51dc179145d0bc11ea5c7df3452b6e 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 250 1.5E-11 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_1162 7f51dc179145d0bc11ea5c7df3452b6e 343 Gene3D G3DSA:2.40.420.20 37 334 1.3E-74 T 17-10-2018 FORC55_1162 7f51dc179145d0bc11ea5c7df3452b6e 343 Gene3D G3DSA:1.10.287.470 91 150 1.3E-74 T 17-10-2018 FORC55_1162 7f51dc179145d0bc11ea5c7df3452b6e 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 337 4.9E-94 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_1162 7f51dc179145d0bc11ea5c7df3452b6e 343 Gene3D G3DSA:2.40.50.100 57 189 1.3E-74 T 17-10-2018 FORC55_0891 e91e4583816a106e1410f85b136eeeda 206 Pfam PF01810 LysE type translocator 15 203 3.5E-25 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_0891 e91e4583816a106e1410f85b136eeeda 206 PIRSF PIRSF006324 1 206 1.6E-42 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_0750 d55b8c66aaea7d3d48cd538900774fdd 257 SUPERFAMILY SSF53474 5 254 1.89E-50 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0750 d55b8c66aaea7d3d48cd538900774fdd 257 PRINTS PR00412 Epoxide hydrolase signature 39 54 8.9E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_0750 d55b8c66aaea7d3d48cd538900774fdd 257 PRINTS PR00412 Epoxide hydrolase signature 82 95 8.9E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_0750 d55b8c66aaea7d3d48cd538900774fdd 257 PRINTS PR00412 Epoxide hydrolase signature 230 252 8.9E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_0750 d55b8c66aaea7d3d48cd538900774fdd 257 Pfam PF00561 alpha/beta hydrolase fold 15 242 2.8E-23 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_0750 d55b8c66aaea7d3d48cd538900774fdd 257 Gene3D G3DSA:3.40.50.1820 5 254 7.3E-67 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_1825 61c40699809415dbe0c4d2ab44b76b88 238 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 6 144 25.491 T 17-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 FORC55_1825 61c40699809415dbe0c4d2ab44b76b88 238 Pfam PF05036 Sporulation related domain 163 231 9.9E-9 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 FORC55_1825 61c40699809415dbe0c4d2ab44b76b88 238 SUPERFAMILY SSF110997 162 231 6.15E-12 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_1825 61c40699809415dbe0c4d2ab44b76b88 238 Gene3D G3DSA:3.30.70.1070 162 232 3.0E-5 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_1825 61c40699809415dbe0c4d2ab44b76b88 238 SUPERFAMILY SSF50685 53 142 1.53E-11 T 17-10-2018 IPR036908 RlpA-like domain superfamily FORC55_1825 61c40699809415dbe0c4d2ab44b76b88 238 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 54 148 1.7E-46 T 17-10-2018 IPR012997 Rare lipoprotein A FORC55_1825 61c40699809415dbe0c4d2ab44b76b88 238 Pfam PF03330 Lytic transglycolase 52 141 8.2E-29 T 17-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain FORC55_1825 61c40699809415dbe0c4d2ab44b76b88 238 Gene3D G3DSA:2.40.40.10 51 145 1.0E-39 T 17-10-2018 IPR036908 RlpA-like domain superfamily FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF52935 323 469 1.18E-34 T 17-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 4.8E-188 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 7.9E-155 T 17-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:2.40.33.10 71 167 1.9E-147 T 17-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:3.40.1380.20 336 467 1.1E-42 T 17-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 9.4E-80 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 9.4E-80 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 9.4E-80 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 9.4E-80 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 9.4E-80 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 9.4E-80 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 9.4E-80 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.6E-28 T 17-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:3.20.20.60 4 332 1.9E-147 T 17-10-2018 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF51621 1 338 3.14E-101 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF50800 70 167 6.28E-30 T 17-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily FORC55_2303 d957f5ff367cc8df43283da2bfe21417 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 17-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_0353 81de4e06175ea386a3234e0166ab6491 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.2E-126 T 17-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 FORC55_0353 81de4e06175ea386a3234e0166ab6491 241 Pfam PF00005 ABC transporter 20 166 7.4E-35 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0353 81de4e06175ea386a3234e0166ab6491 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0353 81de4e06175ea386a3234e0166ab6491 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 3.6E-9 T 17-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal FORC55_0353 81de4e06175ea386a3234e0166ab6491 241 SUPERFAMILY SSF52540 3 237 4.76E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0353 81de4e06175ea386a3234e0166ab6491 241 Gene3D G3DSA:3.40.50.300 2 241 1.2E-70 T 17-10-2018 FORC55_0353 81de4e06175ea386a3234e0166ab6491 241 SMART SM00382 28 202 3.6E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 177 2.0E-18 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 Gene3D G3DSA:3.40.50.12740 1 183 5.8E-50 T 17-10-2018 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 SUPERFAMILY SSF46894 109 184 9.18E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 SMART SM00421 120 177 1.8E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 165 1.9E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 153 1.9E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 123 137 1.9E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 ProSitePatterns PS00622 LuxR-type HTH domain signature. 137 164 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 SUPERFAMILY SSF52172 4 106 1.71E-26 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 Pfam PF00072 Response regulator receiver domain 3 90 3.6E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1571 e0598c9887351c93f1a569f7d9349dd0 188 SMART SM00448 1 89 9.4E-8 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 Gene3D G3DSA:3.40.47.10 126 398 6.2E-146 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 17-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 SUPERFAMILY SSF53901 271 399 3.39E-37 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 17-10-2018 IPR020613 Thiolase, conserved site GO:0016747 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.0E-148 T 17-10-2018 IPR002155 Thiolase GO:0016747 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 Pfam PF02803 Thiolase, C-terminal domain 271 399 2.1E-44 T 17-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 Gene3D G3DSA:3.40.47.10 6 276 6.2E-146 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 PIRSF PIRSF000429 1 401 7.3E-124 T 17-10-2018 IPR002155 Thiolase GO:0016747 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 SUPERFAMILY SSF53901 4 270 2.09E-79 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.0E-94 T 17-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 FORC55_3330 ea05ada83c1ed3398fbc4a3897909ea2 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 17-10-2018 IPR020610 Thiolase, active site GO:0016747 FORC55_1317 522ee527a12253450600f630a4b7536f 353 PIRSF PIRSF001361 1 353 5.2E-157 T 17-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 FORC55_1317 522ee527a12253450600f630a4b7536f 353 Pfam PF00793 DAHP synthetase I family 44 338 8.0E-99 T 17-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 FORC55_1317 522ee527a12253450600f630a4b7536f 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 1.4E-159 T 17-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 FORC55_1317 522ee527a12253450600f630a4b7536f 353 Gene3D G3DSA:3.20.20.70 1 351 6.2E-153 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_1317 522ee527a12253450600f630a4b7536f 353 SUPERFAMILY SSF51569 8 349 1.8E-130 T 17-10-2018 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 Gene3D G3DSA:3.20.20.80 166 192 5.6E-14 T 17-10-2018 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 Pfam PF14600 Cellulose-binding domain 405 444 1.3E-8 T 17-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 SUPERFAMILY SSF54556 38 161 1.51E-9 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 SMART SM00495 402 444 2.4E-5 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 Gene3D G3DSA:3.10.50.10 46 67 4.2E-5 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 SUPERFAMILY SSF51055 392 446 2.75E-13 T 17-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 Pfam PF06483 Chitinase C 200 367 7.8E-62 T 17-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 Gene3D G3DSA:2.10.10.20 394 446 1.2E-12 T 17-10-2018 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 Gene3D G3DSA:3.20.20.80 19 45 4.2E-5 T 17-10-2018 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 SUPERFAMILY SSF51445 6 239 2.48E-13 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 Pfam PF00704 Glycosyl hydrolases family 18 16 191 6.9E-19 T 17-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 FORC55_1708 32bbb0f0af8d319969ab8677593fa244 447 Gene3D G3DSA:3.10.50.10 132 165 5.6E-14 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily FORC55_3613 2b7e8a5b841292b113d1bfb62e8381f3 350 Pfam PF00793 DAHP synthetase I family 40 337 8.5E-108 T 17-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 FORC55_3613 2b7e8a5b841292b113d1bfb62e8381f3 350 Gene3D G3DSA:3.20.20.70 1 349 9.8E-167 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_3613 2b7e8a5b841292b113d1bfb62e8381f3 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 7.4E-171 T 17-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 FORC55_3613 2b7e8a5b841292b113d1bfb62e8381f3 350 PIRSF PIRSF001361 1 350 7.5E-164 T 17-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 FORC55_3613 2b7e8a5b841292b113d1bfb62e8381f3 350 SUPERFAMILY SSF51569 6 347 9.84E-139 T 17-10-2018 FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 Gene3D G3DSA:3.30.420.380 3 238 1.6E-91 T 17-10-2018 FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 SUPERFAMILY SSF53067 2 144 5.83E-41 T 17-10-2018 FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 Gene3D G3DSA:3.30.420.370 142 216 1.6E-91 T 17-10-2018 FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 PIRSF PIRSF015761 4 403 1.8E-38 T 17-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 Pfam PF05134 Type II secretion system (T2SS), protein L 5 240 6.6E-85 T 17-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 Gene3D G3DSA:3.30.1360.100 318 403 8.2E-26 T 17-10-2018 FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 Pfam PF12693 GspL periplasmic domain 246 402 1.1E-51 T 17-10-2018 IPR025691 GspL periplasmic domain FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 402 1.1E-124 T 17-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 FORC55_0160 6ad3b5393b3e65443a7fb8c3ad1ad1c4 403 SUPERFAMILY SSF53067 146 239 5.44E-21 T 17-10-2018 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 SMART SM00859 3 146 2.2E-46 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 310 5.8E-13 T 17-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 SUPERFAMILY SSF55347 154 307 1.31E-48 T 17-10-2018 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 Gene3D G3DSA:3.30.360.10 153 311 1.2E-120 T 17-10-2018 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 Gene3D G3DSA:3.40.50.720 6 328 1.2E-120 T 17-10-2018 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 SUPERFAMILY SSF51735 1 168 5.01E-42 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 332 6.0E-120 T 17-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 17-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 1.5E-32 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 FORC55_0241 cba0c5fab5139b9023f978e90951793a 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 333 37.905 T 17-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 FORC55_2600 294164c483e0504f311a1eeed0c04aec 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 86.311 T 17-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria FORC55_2600 294164c483e0504f311a1eeed0c04aec 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 3.5E-68 T 17-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria FORC55_2600 294164c483e0504f311a1eeed0c04aec 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.6E-34 T 17-10-2018 IPR005134 Uncharacterised protein family UPF0114 FORC55_2874 0f91f558d2c1976195b73f3116b16798 59 Gene3D G3DSA:2.40.160.20 2 59 2.3E-5 T 17-10-2018 FORC55_2969 46c727872c536760b51bb5eafc836730 484 SMART SM00387 380 484 1.4E-4 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_2969 46c727872c536760b51bb5eafc836730 484 SUPERFAMILY SSF55874 361 483 2.1E-15 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2969 46c727872c536760b51bb5eafc836730 484 Gene3D G3DSA:3.30.565.10 344 475 1.4E-13 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_2969 46c727872c536760b51bb5eafc836730 484 SMART SM00388 279 346 6.4E-4 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_2969 46c727872c536760b51bb5eafc836730 484 Gene3D G3DSA:1.10.287.130 287 343 1.4E-13 T 17-10-2018 FORC55_2969 46c727872c536760b51bb5eafc836730 484 Pfam PF11884 Domain of unknown function (DUF3404) 20 281 1.1E-92 T 17-10-2018 IPR021821 Protein of unknown function DUF3404 FORC55_2969 46c727872c536760b51bb5eafc836730 484 SUPERFAMILY SSF47384 278 336 3.34E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_2969 46c727872c536760b51bb5eafc836730 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 482 2.4E-6 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_1771 2b58c434929f86c39aa72fa3ce50b10e 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 118.721 T 17-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 FORC55_1771 2b58c434929f86c39aa72fa3ce50b10e 224 Pfam PF00929 Exonuclease 20 195 4.4E-42 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_1771 2b58c434929f86c39aa72fa3ce50b10e 224 Gene3D G3DSA:3.30.420.10 9 216 1.8E-53 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_1771 2b58c434929f86c39aa72fa3ce50b10e 224 SUPERFAMILY SSF53098 10 208 2.98E-55 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1771 2b58c434929f86c39aa72fa3ce50b10e 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 4.9E-99 T 17-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 FORC55_1771 2b58c434929f86c39aa72fa3ce50b10e 224 SMART SM00479 18 204 3.7E-32 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_0395 bf3b1f1436a6ca9e15a412b23efe64b3 164 Gene3D G3DSA:3.30.70.1150 80 157 3.2E-28 T 17-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal FORC55_0395 bf3b1f1436a6ca9e15a412b23efe64b3 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 5.0E-62 T 17-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 FORC55_0395 bf3b1f1436a6ca9e15a412b23efe64b3 164 SUPERFAMILY SSF55021 79 162 5.15E-27 T 17-10-2018 FORC55_0395 bf3b1f1436a6ca9e15a412b23efe64b3 164 Pfam PF13710 ACT domain 11 73 2.7E-17 T 17-10-2018 FORC55_0395 bf3b1f1436a6ca9e15a412b23efe64b3 164 SUPERFAMILY SSF55021 1 75 3.31E-22 T 17-10-2018 FORC55_0395 bf3b1f1436a6ca9e15a412b23efe64b3 164 Gene3D G3DSA:3.30.70.260 1 79 5.0E-32 T 17-10-2018 FORC55_0395 bf3b1f1436a6ca9e15a412b23efe64b3 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.5E-25 T 17-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 FORC55_0395 bf3b1f1436a6ca9e15a412b23efe64b3 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-37 T 17-10-2018 FORC55_0940 6107d62383df73e1cd33b33f5966ded0 472 SUPERFAMILY SSF48452 58 266 1.99E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 287 2.0E-51 T 17-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 Gene3D G3DSA:3.40.50.1980 181 294 7.2E-39 T 17-10-2018 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 PRINTS PR00691 Adhesin B signature 281 294 2.7E-6 T 17-10-2018 IPR006129 Adhesin B GO:0007155 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 PRINTS PR00691 Adhesin B signature 45 63 2.7E-6 T 17-10-2018 IPR006129 Adhesin B GO:0007155 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 PRINTS PR00691 Adhesin B signature 64 83 2.7E-6 T 17-10-2018 IPR006129 Adhesin B GO:0007155 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 PRINTS PR00691 Adhesin B signature 124 143 2.7E-6 T 17-10-2018 IPR006129 Adhesin B GO:0007155 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 SUPERFAMILY SSF53807 13 292 7.36E-70 T 17-10-2018 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 PRINTS PR00690 Adhesin family signature 51 64 2.3E-6 T 17-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 PRINTS PR00690 Adhesin family signature 180 201 2.3E-6 T 17-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 PRINTS PR00690 Adhesin family signature 64 81 2.3E-6 T 17-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 FORC55_0766 a975327ee3d32ee93c676b0e25137610 294 Gene3D G3DSA:3.40.50.1980 22 180 2.0E-45 T 17-10-2018 FORC55_1454 647942370d8f17b596426dffb8722ed7 482 Gene3D G3DSA:3.90.79.10 23 122 2.9E-13 T 17-10-2018 FORC55_1454 647942370d8f17b596426dffb8722ed7 482 Pfam PF00293 NUDIX domain 36 116 3.8E-11 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_1454 647942370d8f17b596426dffb8722ed7 482 SUPERFAMILY SSF55811 36 174 2.03E-17 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_2903 69a297b1250d936a1e8309367b82afcf 312 Pfam PF01032 FecCD transport family 8 306 8.7E-64 T 17-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 FORC55_2903 69a297b1250d936a1e8309367b82afcf 312 Gene3D G3DSA:1.10.3470.10 1 311 3.1E-63 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_2903 69a297b1250d936a1e8309367b82afcf 312 SUPERFAMILY SSF81345 4 306 7.72E-65 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_1340 ed387efa7b2ce4e53b3e1a93ac224199 107 Pfam PF12321 Protein of unknown function (DUF3634) 4 104 8.9E-42 T 17-10-2018 IPR022090 Protein of unknown function DUF3634 FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 Gene3D G3DSA:3.40.1410.10 89 223 4.7E-33 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 SMART SM00866 90 227 5.2E-34 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 2.9E-8 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 2.9E-8 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 SUPERFAMILY SSF64288 94 230 2.51E-40 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 3 232 4.8E-100 T 17-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 Pfam PF07702 UTRA domain 90 227 2.0E-35 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 SUPERFAMILY SSF46785 3 71 5.71E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 Gene3D G3DSA:1.10.10.10 1 68 7.7E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 2.1E-17 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_1578 e02c1b7385fd14edb5a83c97095e8aa3 236 SMART SM00345 8 67 3.3E-17 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_2327 ba8c3015aa7c9f3085be98d3ae802f83 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.333 T 17-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 FORC55_2327 ba8c3015aa7c9f3085be98d3ae802f83 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 9.5E-87 T 17-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 FORC55_2327 ba8c3015aa7c9f3085be98d3ae802f83 236 Gene3D G3DSA:3.20.20.10 1 235 5.2E-86 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_2327 ba8c3015aa7c9f3085be98d3ae802f83 236 PIRSF PIRSF004848 1 236 1.9E-77 T 17-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 FORC55_2327 ba8c3015aa7c9f3085be98d3ae802f83 236 SUPERFAMILY SSF51419 1 228 1.15E-81 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_2327 ba8c3015aa7c9f3085be98d3ae802f83 236 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 9.0E-34 T 17-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_2327 ba8c3015aa7c9f3085be98d3ae802f83 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 17-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 FORC55_0973 9000822ac969818fef10b4c22108e38d 256 SMART SM00382 31 229 3.1E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0973 9000822ac969818fef10b4c22108e38d 256 SUPERFAMILY SSF52540 7 251 5.7E-76 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0973 9000822ac969818fef10b4c22108e38d 256 Pfam PF00005 ABC transporter 22 181 4.2E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0973 9000822ac969818fef10b4c22108e38d 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0973 9000822ac969818fef10b4c22108e38d 256 PIRSF PIRSF039085 3 256 1.1E-120 T 17-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 FORC55_0973 9000822ac969818fef10b4c22108e38d 256 Gene3D G3DSA:3.40.50.300 3 255 9.1E-78 T 17-10-2018 FORC55_2565 4830c6270538cec1a64898cc8c0a045c 224 Gene3D G3DSA:3.40.140.10 101 224 1.2E-43 T 17-10-2018 FORC55_2565 4830c6270538cec1a64898cc8c0a045c 224 Pfam PF04002 RadC-like JAB domain 104 222 3.3E-45 T 17-10-2018 IPR025657 RadC-like JAB domain FORC55_2565 4830c6270538cec1a64898cc8c0a045c 224 Gene3D G3DSA:1.10.150.20 45 87 3.0E-5 T 17-10-2018 FORC55_2565 4830c6270538cec1a64898cc8c0a045c 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.4E-77 T 17-10-2018 IPR001405 Uncharacterised protein family UPF0758 FORC55_2565 4830c6270538cec1a64898cc8c0a045c 224 SUPERFAMILY SSF102712 133 190 4.05E-5 T 17-10-2018 FORC55_2565 4830c6270538cec1a64898cc8c0a045c 224 SUPERFAMILY SSF47781 17 91 3.16E-11 T 17-10-2018 IPR010994 RuvA domain 2-like FORC55_2565 4830c6270538cec1a64898cc8c0a045c 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 17-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site FORC55_1935 5a96ea7c13b7f5b2ff3cef73b759e7d0 63 Pfam PF05488 PAAR motif 4 43 9.6E-8 T 17-10-2018 IPR008727 PAAR motif FORC55_1935 5a96ea7c13b7f5b2ff3cef73b759e7d0 63 Gene3D G3DSA:2.60.200.60 2 62 5.3E-18 T 17-10-2018 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 1.3E-82 T 17-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 17-10-2018 IPR020610 Thiolase, active site GO:0016747 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 Gene3D G3DSA:3.40.47.10 127 381 2.3E-149 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 SUPERFAMILY SSF53901 1 258 3.4E-78 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 4 387 6.7E-235 T 17-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 SUPERFAMILY SSF53901 263 386 1.2E-43 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 Gene3D G3DSA:3.40.47.10 4 267 2.3E-149 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 PIRSF PIRSF000429 1 387 2.8E-131 T 17-10-2018 IPR002155 Thiolase GO:0016747 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.2E-49 T 17-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 59.966 T 17-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 17-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 17-10-2018 IPR020613 Thiolase, conserved site GO:0016747 FORC55_2641 cecdad310928fb863a8d7a8566b82a88 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 4.4E-142 T 17-10-2018 IPR002155 Thiolase GO:0016747 FORC55_1740 6472e8046a3900261c8e8dbabcd4623d 155 Gene3D G3DSA:3.40.50.2300 1 155 1.7E-63 T 17-10-2018 FORC55_1740 6472e8046a3900261c8e8dbabcd4623d 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 4.4E-22 T 17-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 FORC55_1740 6472e8046a3900261c8e8dbabcd4623d 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 4.4E-22 T 17-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 FORC55_1740 6472e8046a3900261c8e8dbabcd4623d 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 4.4E-22 T 17-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 FORC55_1740 6472e8046a3900261c8e8dbabcd4623d 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 4.4E-22 T 17-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 FORC55_1740 6472e8046a3900261c8e8dbabcd4623d 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 146 2.0E-35 T 17-10-2018 IPR023485 Phosphotyrosine protein phosphatase I FORC55_1740 6472e8046a3900261c8e8dbabcd4623d 155 SMART SM00226 2 148 5.9E-37 T 17-10-2018 IPR023485 Phosphotyrosine protein phosphatase I FORC55_1740 6472e8046a3900261c8e8dbabcd4623d 155 SUPERFAMILY SSF52788 1 148 2.62E-46 T 17-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily FORC55_0899 c3d97d7ba6c4c9e92c1539b72269dd63 332 Gene3D G3DSA:3.40.190.170 27 329 1.1E-89 T 17-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily FORC55_0899 c3d97d7ba6c4c9e92c1539b72269dd63 332 PIRSF PIRSF006470 1 332 1.8E-120 T 17-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 FORC55_0899 c3d97d7ba6c4c9e92c1539b72269dd63 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 1.1E-76 T 17-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 FORC55_0899 c3d97d7ba6c4c9e92c1539b72269dd63 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 7.6E-104 T 17-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 FORC55_2363 638e7260a6e66f3e8b9c56fc1854594f 140 PIRSF PIRSF018193 8 140 6.3E-61 T 17-10-2018 IPR016716 Regulator of ribonuclease activity B FORC55_2363 638e7260a6e66f3e8b9c56fc1854594f 140 Pfam PF06877 Regulator of ribonuclease activity B 18 120 3.1E-34 T 17-10-2018 IPR009671 Regulator of ribonuclease activity B domain FORC55_2363 638e7260a6e66f3e8b9c56fc1854594f 140 SUPERFAMILY SSF89946 7 125 1.1E-39 T 17-10-2018 IPR036701 RraB-like superfamily FORC55_2363 638e7260a6e66f3e8b9c56fc1854594f 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 30.058 T 17-10-2018 IPR016716 Regulator of ribonuclease activity B FORC55_2363 638e7260a6e66f3e8b9c56fc1854594f 140 Gene3D G3DSA:3.30.70.970 1 132 1.1E-60 T 17-10-2018 IPR036701 RraB-like superfamily FORC55_1050 b0a82e9e02bbeac4e6378853abca03ab 303 Gene3D G3DSA:1.10.10.60 194 299 2.5E-22 T 17-10-2018 FORC55_1050 b0a82e9e02bbeac4e6378853abca03ab 303 SMART SM00342 211 294 1.1E-15 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_1050 b0a82e9e02bbeac4e6378853abca03ab 303 Pfam PF12833 Helix-turn-helix domain 217 290 3.4E-15 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_1050 b0a82e9e02bbeac4e6378853abca03ab 303 Pfam PF06719 AraC-type transcriptional regulator N-terminus 31 182 8.8E-48 T 17-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal FORC55_1050 b0a82e9e02bbeac4e6378853abca03ab 303 SUPERFAMILY SSF46689 247 296 1.48E-6 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1050 b0a82e9e02bbeac4e6378853abca03ab 303 SUPERFAMILY SSF46689 194 245 1.58E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_2132 f4baaeba82e3ea190690f023115e54e5 413 Pfam PF10011 Predicted membrane protein (DUF2254) 15 367 1.1E-88 T 17-10-2018 IPR018723 Protein of unknown function DUF2254, membrane FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 367 5.4E-25 T 17-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 SUPERFAMILY SSF51735 173 420 5.04E-79 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 Pfam PF00390 Malic enzyme, N-terminal domain 35 160 1.0E-26 T 17-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 Gene3D G3DSA:3.40.50.10380 8 170 1.5E-65 T 17-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 17-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 Gene3D G3DSA:3.40.50.720 171 425 8.9E-82 T 17-10-2018 FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 SMART SM00919 173 409 8.9E-135 T 17-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 PIRSF PIRSF000106 54 425 4.1E-72 T 17-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 SMART SM01274 28 161 1.3E-71 T 17-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 FORC55_0209 894fbef4c437e1671c42b430128d1e00 425 SUPERFAMILY SSF53223 20 171 4.75E-51 T 17-10-2018 FORC55_3380 a59f60325b5077d04fd9427cc027a7ca 436 Pfam PF00890 FAD binding domain 5 410 6.0E-68 T 17-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_3380 a59f60325b5077d04fd9427cc027a7ca 436 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 2 426 50.514 T 17-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 FORC55_3380 a59f60325b5077d04fd9427cc027a7ca 436 SUPERFAMILY SSF51905 1 424 9.41E-25 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3380 a59f60325b5077d04fd9427cc027a7ca 436 PIRSF PIRSF000141 2 429 2.2E-184 T 17-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 FORC55_3380 a59f60325b5077d04fd9427cc027a7ca 436 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 4 423 4.7E-192 T 17-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 FORC55_3380 a59f60325b5077d04fd9427cc027a7ca 436 Gene3D G3DSA:3.50.50.60 3 77 9.8E-10 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2013 c4c0c05ffbe862e87ea67bda72ef2485 236 SUPERFAMILY SSF109755 10 225 1.15E-70 T 17-10-2018 FORC55_2013 c4c0c05ffbe862e87ea67bda72ef2485 236 Pfam PF01895 PhoU domain 23 109 1.1E-22 T 17-10-2018 IPR026022 PhoU domain FORC55_2013 c4c0c05ffbe862e87ea67bda72ef2485 236 Pfam PF01895 PhoU domain 128 210 1.9E-16 T 17-10-2018 IPR026022 PhoU domain FORC55_2013 c4c0c05ffbe862e87ea67bda72ef2485 236 PIRSF PIRSF003107 4 223 4.7E-70 T 17-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 FORC55_2013 c4c0c05ffbe862e87ea67bda72ef2485 236 Gene3D G3DSA:1.20.58.220 115 232 4.2E-34 T 17-10-2018 IPR038078 PhoU-like domain superfamily FORC55_2013 c4c0c05ffbe862e87ea67bda72ef2485 236 Gene3D G3DSA:1.20.58.220 1 114 1.6E-40 T 17-10-2018 IPR038078 PhoU-like domain superfamily FORC55_2013 c4c0c05ffbe862e87ea67bda72ef2485 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.3E-78 T 17-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 SUPERFAMILY SSF53822 60 332 8.78E-94 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 17-10-2018 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 SUPERFAMILY SSF47413 1 59 1.85E-17 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.2E-44 T 17-10-2018 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 Gene3D G3DSA:3.40.50.2300 161 323 1.2E-91 T 17-10-2018 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.1E-20 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 Gene3D G3DSA:1.10.260.40 3 59 2.0E-24 T 17-10-2018 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 64.568 T 17-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 Gene3D G3DSA:3.40.50.2300 69 322 1.2E-91 T 17-10-2018 FORC55_1041 c99193731e29e7fcc189bd138a9850d4 336 SMART SM00354 1 71 1.9E-37 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_2822 d8925d86d9eff7498fdee1f79b0f6fdb 335 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 325 2.5E-100 T 17-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family FORC55_2822 d8925d86d9eff7498fdee1f79b0f6fdb 335 Gene3D G3DSA:3.40.190.10 119 262 3.8E-88 T 17-10-2018 FORC55_2822 d8925d86d9eff7498fdee1f79b0f6fdb 335 Gene3D G3DSA:3.40.190.10 33 325 3.8E-88 T 17-10-2018 FORC55_2822 d8925d86d9eff7498fdee1f79b0f6fdb 335 SUPERFAMILY SSF53850 31 326 1.86E-66 T 17-10-2018 FORC55_2822 d8925d86d9eff7498fdee1f79b0f6fdb 335 Pfam PF16868 NMT1-like family 33 325 2.8E-107 T 17-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 6.0E-103 T 17-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 17-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 17-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:1.10.286.20 184 223 6.1E-22 T 17-10-2018 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:1.10.8.10 1 55 5.2E-26 T 17-10-2018 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF54713 141 277 8.24E-44 T 17-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF54713 55 137 4.14E-19 T 17-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 Pfam PF00889 Elongation factor TS 70 260 3.6E-60 T 17-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 75.483 T 17-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:3.30.479.20 56 139 1.1E-27 T 17-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 FORC55_0602 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF46934 3 53 1.53E-18 T 17-10-2018 IPR009060 UBA-like superfamily GO:0005515 FORC55_2677 ec2a8218eb84b47564da2fbc4107b8f8 63 SUPERFAMILY SSF46955 10 62 2.56E-10 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily FORC55_2677 ec2a8218eb84b47564da2fbc4107b8f8 63 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 60 1.2E-11 T 17-10-2018 IPR010260 DNA-binding transcriptional activator AlpA FORC55_2677 ec2a8218eb84b47564da2fbc4107b8f8 63 Gene3D G3DSA:1.10.1660.10 6 62 2.8E-6 T 17-10-2018 FORC55_2677 ec2a8218eb84b47564da2fbc4107b8f8 63 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 10 60 1.3E-8 T 17-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 FORC55_1656 ec84944bec557f5f1064e44c6dada3b2 371 Gene3D G3DSA:3.40.50.620 1 219 1.3E-95 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1656 ec84944bec557f5f1064e44c6dada3b2 371 SUPERFAMILY SSF52402 9 251 4.85E-58 T 17-10-2018 FORC55_1656 ec84944bec557f5f1064e44c6dada3b2 371 Gene3D G3DSA:2.30.30.280 220 287 2.7E-27 T 17-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 FORC55_1656 ec84944bec557f5f1064e44c6dada3b2 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 367 2.6E-151 T 17-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 FORC55_1656 ec84944bec557f5f1064e44c6dada3b2 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 368 40.295 T 17-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 FORC55_1656 ec84944bec557f5f1064e44c6dada3b2 371 Pfam PF03054 tRNA methyl transferase 11 367 5.7E-142 T 17-10-2018 FORC55_1656 ec84944bec557f5f1064e44c6dada3b2 371 Gene3D G3DSA:2.40.30.10 289 371 6.2E-33 T 17-10-2018 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 197 210 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 345 356 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 110 118 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 135 150 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 121 134 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 401 414 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 84 97 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 288 302 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 PRINTS PR00415 Aconitase family signature 211 224 2.9E-50 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 17-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 467 60.213 T 17-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 Gene3D G3DSA:3.30.499.20 6 288 1.7E-99 T 17-10-2018 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 466 2.1E-266 T 17-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 4.7E-161 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 Gene3D G3DSA:3.30.499.10 330 467 1.4E-49 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 SUPERFAMILY SSF53732 5 465 3.01E-166 T 17-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 FORC55_0386 332baee6b0f65aca9dd1c2e29f914495 467 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 17-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 FORC55_0290 0a859eca758b7c8692ac0f704b87634a 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.479 T 17-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 FORC55_0290 0a859eca758b7c8692ac0f704b87634a 100 SUPERFAMILY SSF54189 3 92 7.55E-32 T 17-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0290 0a859eca758b7c8692ac0f704b87634a 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 17-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 FORC55_0290 0a859eca758b7c8692ac0f704b87634a 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 17-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0290 0a859eca758b7c8692ac0f704b87634a 100 Gene3D G3DSA:3.30.70.330 1 100 2.5E-38 T 17-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily FORC55_3296 2e846101d2f4b3b08ebb4abe8f18ba2a 378 SUPERFAMILY SSF56059 122 313 9.72E-8 T 17-10-2018 FORC55_0398 1f20a866663cf6658b1d483cd7f87965 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 188 5.8E-55 T 17-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase FORC55_0398 1f20a866663cf6658b1d483cd7f87965 194 SUPERFAMILY SSF100950 4 194 2.51E-57 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_0398 1f20a866663cf6658b1d483cd7f87965 194 Gene3D G3DSA:3.40.50.10420 1 193 2.5E-58 T 17-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily FORC55_0398 1f20a866663cf6658b1d483cd7f87965 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 188 9.8E-45 T 17-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase FORC55_0398 1f20a866663cf6658b1d483cd7f87965 194 PIRSF PIRSF006806 1 191 8.3E-38 T 17-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase FORC55_1933 da9507a51b2b258b5e99fd01275c8b73 99 Pfam PF05488 PAAR motif 4 49 1.2E-7 T 17-10-2018 IPR008727 PAAR motif FORC55_1933 da9507a51b2b258b5e99fd01275c8b73 99 Pfam PF05488 PAAR motif 46 91 2.3E-10 T 17-10-2018 IPR008727 PAAR motif FORC55_1933 da9507a51b2b258b5e99fd01275c8b73 99 Gene3D G3DSA:2.60.200.60 2 99 2.8E-39 T 17-10-2018 FORC55_2170 9dac2ebbba82c8928a0278100bd003c0 337 Pfam PF01136 Peptidase family U32 75 336 2.2E-70 T 17-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 FORC55_2170 9dac2ebbba82c8928a0278100bd003c0 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 17-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 FORC55_3432 c2f708b8d49ad502a92f575f4ccce588 501 Pfam PF04389 Peptidase family M28 181 378 4.0E-39 T 17-10-2018 IPR007484 Peptidase M28 FORC55_3432 c2f708b8d49ad502a92f575f4ccce588 501 Gene3D G3DSA:2.60.120.380 400 499 2.2E-33 T 17-10-2018 FORC55_3432 c2f708b8d49ad502a92f575f4ccce588 501 SUPERFAMILY SSF53187 106 392 4.37E-69 T 17-10-2018 FORC55_3432 c2f708b8d49ad502a92f575f4ccce588 501 Gene3D G3DSA:3.40.630.10 105 398 1.2E-90 T 17-10-2018 FORC55_3432 c2f708b8d49ad502a92f575f4ccce588 501 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 421 485 1.2E-11 T 17-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial FORC55_3432 c2f708b8d49ad502a92f575f4ccce588 501 PIRSF PIRSF036685 1 501 4.3E-285 T 17-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 FORC55_1990 ff80d8cf85935ed58166fea9c84dbf67 112 Gene3D G3DSA:3.10.20.30 1 112 4.5E-36 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_1990 ff80d8cf85935ed58166fea9c84dbf67 112 SUPERFAMILY SSF54292 4 107 1.47E-33 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 FORC55_1990 ff80d8cf85935ed58166fea9c84dbf67 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 3.9E-15 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 FORC55_1990 ff80d8cf85935ed58166fea9c84dbf67 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.7E-10 T 17-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 FORC55_1990 ff80d8cf85935ed58166fea9c84dbf67 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.7E-10 T 17-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 FORC55_1990 ff80d8cf85935ed58166fea9c84dbf67 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.7E-10 T 17-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 FORC55_1990 ff80d8cf85935ed58166fea9c84dbf67 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 17-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 FORC55_1990 ff80d8cf85935ed58166fea9c84dbf67 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 2.2E-61 T 17-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 4.6E-64 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 Gene3D G3DSA:3.60.20.40 407 584 1.9E-57 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 Pfam PF01019 Gamma-glutamyltranspeptidase 64 579 1.2E-163 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 Gene3D G3DSA:1.10.246.130 282 406 7.7E-36 T 17-10-2018 FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 SUPERFAMILY SSF56235 40 583 4.05E-171 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_2614 47318e4d1579e9ad222c28d41548aa0c 584 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 576 2.8E-138 T 17-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 Gene3D G3DSA:3.40.140.10 29 179 1.5E-45 T 17-10-2018 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 17-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 SUPERFAMILY SSF53927 153 283 1.61E-36 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.8E-41 T 17-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 PIRSF PIRSF006334 14 295 2.4E-108 T 17-10-2018 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 5.3E-13 T 17-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 SUPERFAMILY SSF53927 1 147 2.34E-42 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 Gene3D G3DSA:3.40.140.10 180 295 3.7E-29 T 17-10-2018 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 2.3E-114 T 17-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 FORC55_1559 ad69954899c5460889dc4bac78d5e5a9 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.731 T 17-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 FORC55_0722 866ddafbe1f3a6acb31dae211ee5c678 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 1.4E-33 T 17-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 FORC55_0722 866ddafbe1f3a6acb31dae211ee5c678 147 Pfam PF02050 Flagellar FliJ protein 17 140 1.7E-30 T 17-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 FORC55_2350 e433a13e142f557db7534f282aebaf24 253 Pfam PF06738 Putative threonine/serine exporter 10 247 1.5E-67 T 17-10-2018 IPR010619 Putative threonine/serine exporter FORC55_0532 80608c7d9cfce1352e2c7ce9b8de1155 380 Pfam PF02417 Chromate transporter 3 168 4.0E-33 T 17-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 FORC55_0532 80608c7d9cfce1352e2c7ce9b8de1155 380 Pfam PF02417 Chromate transporter 211 373 1.5E-33 T 17-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 FORC55_0532 80608c7d9cfce1352e2c7ce9b8de1155 380 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 374 1.6E-89 T 17-10-2018 IPR014047 Chromate transporter, long chain FORC55_0532 80608c7d9cfce1352e2c7ce9b8de1155 380 PIRSF PIRSF004810 1 380 2.1E-113 T 17-10-2018 IPR014047 Chromate transporter, long chain FORC55_3239 012d9b7ef8191f457f4ca299aecb7075 367 Pfam PF00266 Aminotransferase class-V 37 315 1.5E-30 T 17-10-2018 IPR000192 Aminotransferase class V domain FORC55_3239 012d9b7ef8191f457f4ca299aecb7075 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 1.4E-191 T 17-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 FORC55_3239 012d9b7ef8191f457f4ca299aecb7075 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 212.695 T 17-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 FORC55_3239 012d9b7ef8191f457f4ca299aecb7075 367 SUPERFAMILY SSF53383 3 362 1.01E-89 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3239 012d9b7ef8191f457f4ca299aecb7075 367 Gene3D G3DSA:3.90.1150.10 8 353 1.9E-121 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3239 012d9b7ef8191f457f4ca299aecb7075 367 PIRSF PIRSF000524 1 366 6.2E-59 T 17-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 FORC55_3239 012d9b7ef8191f457f4ca299aecb7075 367 Gene3D G3DSA:3.40.640.10 16 262 1.9E-121 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3239 012d9b7ef8191f457f4ca299aecb7075 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 361 1.3E-163 T 17-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 FORC55_3386 4c87886866deb2e40232a6da9a264258 262 Gene3D G3DSA:3.40.50.1820 6 236 1.3E-30 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_3386 4c87886866deb2e40232a6da9a264258 262 Pfam PF01764 Lipase (class 3) 60 204 1.1E-27 T 17-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 FORC55_3386 4c87886866deb2e40232a6da9a264258 262 SUPERFAMILY SSF53474 9 247 3.52E-35 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.0E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.0E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.0E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 Pfam PF00072 Response regulator receiver domain 7 119 2.7E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 SMART SM00421 148 205 5.0E-22 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 SUPERFAMILY SSF52172 4 134 1.85E-36 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.1E-19 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 Gene3D G3DSA:3.40.50.12740 5 211 1.2E-66 T 17-10-2018 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 SUPERFAMILY SSF46894 140 211 1.33E-21 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1515 8297bfca751dc342aa3565fbaf64c3cd 212 SMART SM00448 5 118 9.5E-32 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Pfam PF00873 AcrB/AcrD/AcrF family 16 1044 1.8E-165 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Gene3D G3DSA:1.20.1640.10 517 1042 6.4E-236 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 SUPERFAMILY SSF82714 732 816 1.19E-10 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Gene3D G3DSA:3.30.2090.10 731 821 6.4E-236 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Gene3D G3DSA:1.20.1640.10 21 516 6.4E-236 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 SUPERFAMILY SSF82714 194 275 3.4E-14 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 370 391 4.3E-26 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 4.3E-26 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 4.3E-26 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 4.3E-26 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 4.3E-26 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 4.3E-26 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Gene3D G3DSA:3.30.70.1430 47 829 6.4E-236 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Gene3D G3DSA:3.30.70.1440 681 892 6.4E-236 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 SUPERFAMILY SSF82693 47 136 1.99E-19 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 SUPERFAMILY SSF82693 568 681 8.89E-12 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 SUPERFAMILY SSF82866 822 1049 1.44E-44 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Gene3D G3DSA:3.30.70.1430 572 680 6.4E-236 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Gene3D G3DSA:3.30.2090.10 189 280 6.4E-236 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 SUPERFAMILY SSF82693 149 336 6.28E-13 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 Gene3D G3DSA:3.30.70.1320 143 338 6.4E-236 T 17-10-2018 FORC55_3284 264b8995021ab1fabe61692b6e90c6ab 1052 SUPERFAMILY SSF82866 303 504 4.45E-37 T 17-10-2018 FORC55_1574 46693573990a876d7711541d7b6e242e 255 Pfam PF01909 Nucleotidyltransferase domain 37 81 1.8E-5 T 17-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 FORC55_1574 46693573990a876d7711541d7b6e242e 255 SUPERFAMILY SSF81301 36 100 8.72E-8 T 17-10-2018 FORC55_1574 46693573990a876d7711541d7b6e242e 255 Gene3D G3DSA:3.30.460.10 6 108 1.5E-6 T 17-10-2018 FORC55_3313 5f990e746e0cf96f7c0df5a01febb36c 456 Gene3D G3DSA:3.30.1330.90 10 157 7.6E-52 T 17-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 FORC55_3313 5f990e746e0cf96f7c0df5a01febb36c 456 Pfam PF03313 Serine dehydratase alpha chain 182 447 5.7E-96 T 17-10-2018 IPR005130 Serine dehydratase-like, alpha subunit FORC55_3313 5f990e746e0cf96f7c0df5a01febb36c 456 Pfam PF03315 Serine dehydratase beta chain 3 153 1.9E-54 T 17-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 FORC55_3313 5f990e746e0cf96f7c0df5a01febb36c 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 6.4E-202 T 17-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 FORC55_3313 5f990e746e0cf96f7c0df5a01febb36c 456 SUPERFAMILY SSF143548 16 155 1.62E-44 T 17-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 FORC55_0316 037a8f801253b03631f8e6f1eb048b46 206 Gene3D G3DSA:3.10.50.40 68 206 1.1E-48 T 17-10-2018 FORC55_0316 037a8f801253b03631f8e6f1eb048b46 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 8.7E-26 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain FORC55_0316 037a8f801253b03631f8e6f1eb048b46 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 5.3E-24 T 17-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 FORC55_0316 037a8f801253b03631f8e6f1eb048b46 206 SUPERFAMILY SSF54534 7 205 8.45E-55 T 17-10-2018 FORC55_0316 037a8f801253b03631f8e6f1eb048b46 206 Gene3D G3DSA:1.10.287.460 4 67 1.6E-19 T 17-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 FORC55_1392 927c637af269421b8da41a8e69a0a81b 389 Gene3D G3DSA:3.40.50.1820 227 377 1.1E-8 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_1392 927c637af269421b8da41a8e69a0a81b 389 SUPERFAMILY SSF53474 179 376 7.55E-10 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_1569 915c4fabb5ee50557bbb254f7b6b5fc0 185 PIRSF PIRSF000847 1 184 1.3E-44 T 17-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 FORC55_1569 915c4fabb5ee50557bbb254f7b6b5fc0 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 1.2E-54 T 17-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 FORC55_1569 915c4fabb5ee50557bbb254f7b6b5fc0 185 Gene3D G3DSA:1.20.120.1760 2 180 3.0E-17 T 17-10-2018 FORC55_1569 915c4fabb5ee50557bbb254f7b6b5fc0 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 FORC55_1569 915c4fabb5ee50557bbb254f7b6b5fc0 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.3E-17 T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 FORC55_2086 8797eba7b099db0fa84c8b554760e44f 481 Gene3D G3DSA:3.30.450.20 1 105 5.0E-13 T 17-10-2018 FORC55_2086 8797eba7b099db0fa84c8b554760e44f 481 SUPERFAMILY SSF55785 2 76 1.41E-15 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2086 8797eba7b099db0fa84c8b554760e44f 481 SUPERFAMILY SSF58104 212 479 1.2E-61 T 17-10-2018 FORC55_2086 8797eba7b099db0fa84c8b554760e44f 481 Pfam PF08447 PAS fold 2 76 8.4E-10 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 FORC55_2086 8797eba7b099db0fa84c8b554760e44f 481 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 263 445 4.3E-37 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2086 8797eba7b099db0fa84c8b554760e44f 481 SMART SM00283 224 479 8.5E-48 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2086 8797eba7b099db0fa84c8b554760e44f 481 Gene3D G3DSA:1.10.287.950 152 480 9.5E-55 T 17-10-2018 FORC55_2011 2129b8e0af9cd5021e60b9593def2e01 254 Pfam PF03932 CutC family 4 205 8.4E-92 T 17-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 FORC55_2011 2129b8e0af9cd5021e60b9593def2e01 254 SUPERFAMILY SSF110395 4 247 1.44E-70 T 17-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 FORC55_2011 2129b8e0af9cd5021e60b9593def2e01 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.428 T 17-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 FORC55_2011 2129b8e0af9cd5021e60b9593def2e01 254 Gene3D G3DSA:3.20.20.380 3 250 1.3E-84 T 17-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 FORC55_0504 6db84f19d701acac9fd18061db263758 238 Gene3D G3DSA:3.40.50.2300 2 121 7.3E-33 T 17-10-2018 FORC55_0504 6db84f19d701acac9fd18061db263758 238 SUPERFAMILY SSF52172 2 129 2.56E-36 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0504 6db84f19d701acac9fd18061db263758 238 SMART SM00448 4 114 3.6E-37 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0504 6db84f19d701acac9fd18061db263758 238 SUPERFAMILY SSF46894 137 233 5.1E-21 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_0504 6db84f19d701acac9fd18061db263758 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_0504 6db84f19d701acac9fd18061db263758 238 SMART SM00862 156 232 2.4E-14 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_0504 6db84f19d701acac9fd18061db263758 238 Pfam PF00072 Response regulator receiver domain 6 113 7.0E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0504 6db84f19d701acac9fd18061db263758 238 Gene3D G3DSA:1.10.10.10 122 236 4.9E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 SMART SM00411 3 92 2.9E-40 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.314 T 17-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 4.3E-51 T 17-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 17-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 SUPERFAMILY SSF47729 3 95 3.09E-32 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.3E-31 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 FORC55_1564 51fb5398a1243aea2a4b85e7335079ec 98 Gene3D G3DSA:4.10.520.10 1 98 9.4E-38 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 FORC55_2187 9d40c4697baee02210de36a4e8182725 209 PIRSF PIRSF005461 1 209 5.8E-80 T 17-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 FORC55_2187 9d40c4697baee02210de36a4e8182725 209 SUPERFAMILY SSF53335 30 209 1.7E-45 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2187 9d40c4697baee02210de36a4e8182725 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.605 T 17-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 FORC55_2187 9d40c4697baee02210de36a4e8182725 209 Gene3D G3DSA:3.40.50.150 30 209 1.2E-58 T 17-10-2018 FORC55_2187 9d40c4697baee02210de36a4e8182725 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 6.2E-56 T 17-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 FORC55_2558 0462dce1c748134370111f6be0285cde 259 Pfam PF00535 Glycosyl transferase family 2 8 127 1.1E-14 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 FORC55_2558 0462dce1c748134370111f6be0285cde 259 SUPERFAMILY SSF53448 3 149 2.88E-24 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2558 0462dce1c748134370111f6be0285cde 259 Gene3D G3DSA:3.90.550.10 2 176 7.8E-21 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_0090 65a1687392f0f130e08e3d18c141dc85 220 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.2E-71 T 17-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 FORC55_0090 65a1687392f0f130e08e3d18c141dc85 220 Gene3D G3DSA:3.40.50.300 3 201 1.0E-56 T 17-10-2018 FORC55_0090 65a1687392f0f130e08e3d18c141dc85 220 Pfam PF01926 50S ribosome-binding GTPase 29 147 3.5E-19 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 FORC55_0090 65a1687392f0f130e08e3d18c141dc85 220 SUPERFAMILY SSF52540 15 199 6.69E-33 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0090 65a1687392f0f130e08e3d18c141dc85 220 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.165 T 17-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 FORC55_0792 2792b41c84ad306aadecf29140dfb5ee 160 SUPERFAMILY SSF82093 30 141 7.85E-39 T 17-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 FORC55_0792 2792b41c84ad306aadecf29140dfb5ee 160 Pfam PF03100 CcmE 4 135 8.4E-45 T 17-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 FORC55_0792 2792b41c84ad306aadecf29140dfb5ee 160 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 32.14 T 17-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 FORC55_0792 2792b41c84ad306aadecf29140dfb5ee 160 Gene3D G3DSA:2.40.50.140 30 141 3.5E-40 T 17-10-2018 FORC55_3210 7175ad5e3005990b7d3c15811b3853a9 295 Gene3D G3DSA:3.40.190.10 139 276 8.4E-10 T 17-10-2018 FORC55_3210 7175ad5e3005990b7d3c15811b3853a9 295 Gene3D G3DSA:1.10.10.10 5 90 1.1E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3210 7175ad5e3005990b7d3c15811b3853a9 295 Pfam PF03466 LysR substrate binding domain 124 291 2.8E-17 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3210 7175ad5e3005990b7d3c15811b3853a9 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.1E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3210 7175ad5e3005990b7d3c15811b3853a9 295 SUPERFAMILY SSF53850 98 292 4.71E-21 T 17-10-2018 FORC55_3210 7175ad5e3005990b7d3c15811b3853a9 295 SUPERFAMILY SSF46785 4 84 2.01E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3210 7175ad5e3005990b7d3c15811b3853a9 295 Gene3D G3DSA:3.40.190.10 169 264 8.4E-10 T 17-10-2018 FORC55_0553 d494e1ced0ece2c0ac35de4e9efcf9a5 271 Pfam PF00899 ThiF family 26 267 3.3E-38 T 17-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 FORC55_0553 d494e1ced0ece2c0ac35de4e9efcf9a5 271 SUPERFAMILY SSF69572 9 268 2.75E-64 T 17-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 FORC55_0553 d494e1ced0ece2c0ac35de4e9efcf9a5 271 Gene3D G3DSA:3.40.50.720 5 271 1.7E-107 T 17-10-2018 FORC55_1036 b950ca159dc70f468050a6080e18a659 484 Gene3D G3DSA:3.40.50.2000 6 479 1.3E-158 T 17-10-2018 FORC55_1036 b950ca159dc70f468050a6080e18a659 484 Pfam PF00534 Glycosyl transferases group 1 298 443 2.5E-14 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 FORC55_1036 b950ca159dc70f468050a6080e18a659 484 Gene3D G3DSA:3.40.50.2000 254 465 1.3E-158 T 17-10-2018 FORC55_1036 b950ca159dc70f468050a6080e18a659 484 SUPERFAMILY SSF53756 5 481 1.1E-117 T 17-10-2018 FORC55_1036 b950ca159dc70f468050a6080e18a659 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 5 479 2.2E-157 T 17-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 FORC55_1036 b950ca159dc70f468050a6080e18a659 484 Hamap MF_00484 Glycogen synthase [glgA]. 4 481 41.237 T 17-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 FORC55_1036 b950ca159dc70f468050a6080e18a659 484 Pfam PF08323 Starch synthase catalytic domain 5 235 4.8E-69 T 17-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 FORC55_0912 85367b0d8640e9971493d5418c65ea56 225 Gene3D G3DSA:3.40.50.300 1 225 2.4E-83 T 17-10-2018 FORC55_0912 85367b0d8640e9971493d5418c65ea56 225 Pfam PF02224 Cytidylate kinase 8 221 7.1E-80 T 17-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 FORC55_0912 85367b0d8640e9971493d5418c65ea56 225 SUPERFAMILY SSF52540 6 223 2.89E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0912 85367b0d8640e9971493d5418c65ea56 225 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.645 T 17-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 FORC55_0912 85367b0d8640e9971493d5418c65ea56 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 3.5E-86 T 17-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 FORC55_3680 c8a869a1a031cb43c3f8ea325adc53e2 210 Gene3D G3DSA:1.25.40.10 13 198 5.3E-14 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_3680 c8a869a1a031cb43c3f8ea325adc53e2 210 Pfam PF14559 Tetratricopeptide repeat 136 183 3.5E-6 T 17-10-2018 FORC55_3680 c8a869a1a031cb43c3f8ea325adc53e2 210 SUPERFAMILY SSF48452 40 179 7.11E-14 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1665 730d2fc74105b41188ce6c99bf2db739 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 FORC55_1665 730d2fc74105b41188ce6c99bf2db739 241 SUPERFAMILY SSF51735 4 238 6.67E-45 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1665 730d2fc74105b41188ce6c99bf2db739 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.6E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1665 730d2fc74105b41188ce6c99bf2db739 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.6E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1665 730d2fc74105b41188ce6c99bf2db739 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.6E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1665 730d2fc74105b41188ce6c99bf2db739 241 Pfam PF00106 short chain dehydrogenase 3 181 1.5E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1665 730d2fc74105b41188ce6c99bf2db739 241 Gene3D G3DSA:3.40.50.720 2 234 1.5E-43 T 17-10-2018 FORC55_2318 2aa8adca7453c0106cbb5809e2a9066c 231 Pfam PF04231 Endonuclease I 34 227 6.3E-42 T 17-10-2018 IPR007346 Endonuclease I GO:0004518 FORC55_2318 2aa8adca7453c0106cbb5809e2a9066c 231 SUPERFAMILY SSF54060 21 229 7.42E-91 T 17-10-2018 FORC55_2993 21d2b569d58a53911ec0d73c4094e0ea 320 Gene3D G3DSA:1.10.150.130 1 94 4.5E-31 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal FORC55_2993 21d2b569d58a53911ec0d73c4094e0ea 320 Pfam PF00589 Phage integrase family 105 307 1.3E-45 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 FORC55_2993 21d2b569d58a53911ec0d73c4094e0ea 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 4.1E-26 T 17-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 FORC55_2993 21d2b569d58a53911ec0d73c4094e0ea 320 SUPERFAMILY SSF56349 11 307 2.24E-47 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 FORC55_2993 21d2b569d58a53911ec0d73c4094e0ea 320 Gene3D G3DSA:1.10.443.10 95 310 1.1E-76 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 FORC55_2993 21d2b569d58a53911ec0d73c4094e0ea 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 3.2E-158 T 17-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 FORC55_0318 c1ec7ce3039848e1608030fa0eda5bb0 297 SUPERFAMILY SSF103481 178 270 4.32E-10 T 17-10-2018 FORC55_0318 c1ec7ce3039848e1608030fa0eda5bb0 297 SUPERFAMILY SSF103481 41 141 3.53E-14 T 17-10-2018 FORC55_0318 c1ec7ce3039848e1608030fa0eda5bb0 297 Pfam PF00892 EamA-like transporter family 143 268 1.0E-9 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_0318 c1ec7ce3039848e1608030fa0eda5bb0 297 Pfam PF00892 EamA-like transporter family 7 137 6.5E-12 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_0860 55e70a12c73f1821f01121cd2aeb0ccc 441 SMART SM00471 58 264 7.1E-8 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_0860 55e70a12c73f1821f01121cd2aeb0ccc 441 Pfam PF01966 HD domain 62 143 5.7E-7 T 17-10-2018 IPR006674 HD domain FORC55_0860 55e70a12c73f1821f01121cd2aeb0ccc 441 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 1.6E-142 T 17-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 FORC55_0860 55e70a12c73f1821f01121cd2aeb0ccc 441 Pfam PF13286 Phosphohydrolase-associated domain 343 433 1.6E-28 T 17-10-2018 IPR026875 Phosphohydrolase-associated domain FORC55_0860 55e70a12c73f1821f01121cd2aeb0ccc 441 SUPERFAMILY SSF109604 23 437 9.42E-80 T 17-10-2018 FORC55_0860 55e70a12c73f1821f01121cd2aeb0ccc 441 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.599 T 17-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 FORC55_0804 32d181f21df4dcd331f7bf471f2111e7 600 Pfam PF00884 Sulfatase 265 513 1.2E-22 T 17-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 FORC55_0804 32d181f21df4dcd331f7bf471f2111e7 600 Gene3D G3DSA:3.40.720.10 250 524 3.8E-38 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 FORC55_0804 32d181f21df4dcd331f7bf471f2111e7 600 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 2.5E-101 T 17-10-2018 IPR024588 Inner membrane protein YejM, N-terminal FORC55_0804 32d181f21df4dcd331f7bf471f2111e7 600 SUPERFAMILY SSF53649 259 580 1.44E-49 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 FORC55_0804 32d181f21df4dcd331f7bf471f2111e7 600 PIRSF PIRSF004950 6 598 6.8E-250 T 17-10-2018 IPR012159 Inner membrane protein YejM FORC55_1171 c53a9a389ecd081b46e66431517804b8 235 SUPERFAMILY SSF55120 2 196 2.4E-46 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1171 c53a9a389ecd081b46e66431517804b8 235 Gene3D G3DSA:3.30.2350.10 1 194 9.4E-48 T 17-10-2018 FORC55_1171 c53a9a389ecd081b46e66431517804b8 235 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1171 c53a9a389ecd081b46e66431517804b8 235 Pfam PF00849 RNA pseudouridylate synthase 10 153 3.8E-25 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1171 c53a9a389ecd081b46e66431517804b8 235 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.1E-121 T 17-10-2018 IPR006508 Pseudouridine synthase, RluA-like FORC55_1440 9382a0cbd3efc767d9a816d935a62799 397 SUPERFAMILY SSF88697 3 72 4.72E-17 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_1440 9382a0cbd3efc767d9a816d935a62799 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 111 376 2.1E-29 T 17-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 FORC55_1440 9382a0cbd3efc767d9a816d935a62799 397 Gene3D G3DSA:3.40.50.150 181 396 5.6E-69 T 17-10-2018 FORC55_1440 9382a0cbd3efc767d9a816d935a62799 397 Gene3D G3DSA:2.30.130.10 2 71 3.8E-27 T 17-10-2018 IPR036974 PUA domain superfamily GO:0003723 FORC55_1440 9382a0cbd3efc767d9a816d935a62799 397 Gene3D G3DSA:3.30.750.80 72 180 7.4E-37 T 17-10-2018 FORC55_1440 9382a0cbd3efc767d9a816d935a62799 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.544 T 17-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 FORC55_1440 9382a0cbd3efc767d9a816d935a62799 397 SMART SM00359 3 87 1.5E-8 T 17-10-2018 IPR002478 PUA domain GO:0003723 FORC55_1440 9382a0cbd3efc767d9a816d935a62799 397 SUPERFAMILY SSF53335 78 393 9.6E-71 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2885 fd12cb9c6d3157fa3d9db264370144f8 175 Gene3D G3DSA:3.40.50.620 1 173 4.6E-45 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2885 fd12cb9c6d3157fa3d9db264370144f8 175 SUPERFAMILY SSF52374 1 173 8.13E-29 T 17-10-2018 FORC55_2885 fd12cb9c6d3157fa3d9db264370144f8 175 Pfam PF01467 Cytidylyltransferase-like 7 143 5.1E-7 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 FORC55_2127 23f022f552b3dd7ee5f8dee7b7082d6e 94 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 6 92 2.7E-40 T 17-10-2018 IPR030907 Ferritin-like protein FORC55_2127 23f022f552b3dd7ee5f8dee7b7082d6e 94 Gene3D G3DSA:1.20.1260.10 11 72 6.4E-5 T 17-10-2018 IPR012347 Ferritin-like FORC55_2127 23f022f552b3dd7ee5f8dee7b7082d6e 94 SUPERFAMILY SSF47240 5 90 1.62E-25 T 17-10-2018 IPR009078 Ferritin-like superfamily FORC55_2124 3c15019b2bd11c788ac69d8b872136e2 545 Pfam PF00990 Diguanylate cyclase, GGDEF domain 126 274 4.3E-16 T 17-10-2018 IPR000160 GGDEF domain FORC55_2124 3c15019b2bd11c788ac69d8b872136e2 545 Gene3D G3DSA:3.30.70.270 127 296 5.4E-21 T 17-10-2018 FORC55_2124 3c15019b2bd11c788ac69d8b872136e2 545 Gene3D G3DSA:3.20.20.450 297 542 1.6E-89 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2124 3c15019b2bd11c788ac69d8b872136e2 545 SUPERFAMILY SSF55073 131 283 2.2E-16 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2124 3c15019b2bd11c788ac69d8b872136e2 545 SMART SM00267 114 283 1.5E-14 T 17-10-2018 IPR000160 GGDEF domain FORC55_2124 3c15019b2bd11c788ac69d8b872136e2 545 Pfam PF00563 EAL domain 300 532 1.3E-70 T 17-10-2018 IPR001633 EAL domain FORC55_2124 3c15019b2bd11c788ac69d8b872136e2 545 SMART SM00052 293 538 8.5E-94 T 17-10-2018 IPR001633 EAL domain FORC55_2124 3c15019b2bd11c788ac69d8b872136e2 545 SUPERFAMILY SSF141868 300 542 2.75E-82 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0645 bfd965bd8ddf8487d1ca9fa6d2ce0ea8 687 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 687 3.2E-111 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 FORC55_0645 bfd965bd8ddf8487d1ca9fa6d2ce0ea8 687 Gene3D G3DSA:2.40.170.20 56 687 1.0E-89 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_0645 bfd965bd8ddf8487d1ca9fa6d2ce0ea8 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 178 5.3E-12 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_0645 bfd965bd8ddf8487d1ca9fa6d2ce0ea8 687 SUPERFAMILY SSF56935 45 687 8.24E-90 T 17-10-2018 FORC55_2809 4af85c7773d1e9d4a1525aebe1741545 292 Pfam PF13407 Periplasmic binding protein domain 27 278 8.0E-60 T 17-10-2018 IPR025997 Periplasmic binding protein FORC55_2809 4af85c7773d1e9d4a1525aebe1741545 292 SUPERFAMILY SSF53822 4 291 8.73E-84 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_2809 4af85c7773d1e9d4a1525aebe1741545 292 Gene3D G3DSA:3.40.50.2300 125 259 7.1E-96 T 17-10-2018 FORC55_2809 4af85c7773d1e9d4a1525aebe1741545 292 Gene3D G3DSA:3.40.50.2300 32 278 7.1E-96 T 17-10-2018 FORC55_2330 51c110b6045e74856e02e411857c9cbf 96 Gene3D G3DSA:3.30.1200.10 1 96 1.9E-33 T 17-10-2018 IPR036591 YggU-like superfamily FORC55_2330 51c110b6045e74856e02e411857c9cbf 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 19.817 T 17-10-2018 IPR003746 Protein of unknown function DUF167 FORC55_2330 51c110b6045e74856e02e411857c9cbf 96 SMART SM01152 7 83 5.8E-37 T 17-10-2018 IPR003746 Protein of unknown function DUF167 FORC55_2330 51c110b6045e74856e02e411857c9cbf 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 2.9E-24 T 17-10-2018 IPR003746 Protein of unknown function DUF167 FORC55_2330 51c110b6045e74856e02e411857c9cbf 96 SUPERFAMILY SSF69786 4 95 9.68E-32 T 17-10-2018 IPR036591 YggU-like superfamily FORC55_2330 51c110b6045e74856e02e411857c9cbf 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 1.1E-25 T 17-10-2018 IPR005228 Conserved hypothetical protein CHP00251 FORC55_3493 eda99b513d4614235010c156719eacb3 199 Gene3D G3DSA:3.40.30.10 1 196 1.7E-41 T 17-10-2018 FORC55_3493 eda99b513d4614235010c156719eacb3 199 SUPERFAMILY SSF52833 1 195 7.96E-24 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_3493 eda99b513d4614235010c156719eacb3 199 Pfam PF01323 DSBA-like thioredoxin domain 1 170 5.1E-10 T 17-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 384 525 5.5E-48 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1536 1678 2.8E-56 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1248 1390 9.8E-52 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1392 1534 4.9E-53 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 672 814 4.8E-52 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1680 1822 1.1E-52 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1104 1246 5.8E-52 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1824 1955 8.9E-45 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 816 958 1.8E-51 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 529 670 3.9E-55 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 960 1102 4.3E-52 T 17-10-2018 IPR019959 T1SS-143 repeat-containing domain FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4044 4137 5.1E-14 T 17-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 Gene3D G3DSA:2.150.10.10 3980 4122 3.3E-14 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 SUPERFAMILY SSF51120 3982 4121 1.27E-15 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal FORC55_3462 dfb7040ebb3b2ba9089ef379cc025913 4140 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4012 4030 - T 17-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site FORC55_1045 257b13267fc85af07a56049b293ab9c5 260 Gene3D G3DSA:3.40.50.150 9 260 3.2E-60 T 17-10-2018 FORC55_1045 257b13267fc85af07a56049b293ab9c5 260 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 41.747 T 17-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 FORC55_1045 257b13267fc85af07a56049b293ab9c5 260 Pfam PF08241 Methyltransferase domain 52 148 2.6E-13 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 FORC55_1045 257b13267fc85af07a56049b293ab9c5 260 SUPERFAMILY SSF53335 5 259 3.25E-33 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0665 6916f1200498ade7877f94ecb6db8910 624 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 8.5E-9 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 FORC55_0665 6916f1200498ade7877f94ecb6db8910 624 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 8.5E-9 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 FORC55_0665 6916f1200498ade7877f94ecb6db8910 624 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 8.5E-9 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 FORC55_0665 6916f1200498ade7877f94ecb6db8910 624 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 8.5E-9 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 FORC55_0665 6916f1200498ade7877f94ecb6db8910 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 348 2.9E-59 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 FORC55_0665 6916f1200498ade7877f94ecb6db8910 624 SUPERFAMILY SSF64518 167 622 4.97E-26 T 17-10-2018 FORC55_0665 6916f1200498ade7877f94ecb6db8910 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 578 622 5.3E-9 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain FORC55_2452 611e8774edb9ff92a5e5a7848a47be38 355 Gene3D G3DSA:3.20.20.210 1 355 1.4E-159 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 FORC55_2452 611e8774edb9ff92a5e5a7848a47be38 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.898 T 17-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 FORC55_2452 611e8774edb9ff92a5e5a7848a47be38 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 8.4E-142 T 17-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 FORC55_2452 611e8774edb9ff92a5e5a7848a47be38 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.3E-142 T 17-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 FORC55_2452 611e8774edb9ff92a5e5a7848a47be38 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 17-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 FORC55_2452 611e8774edb9ff92a5e5a7848a47be38 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 17-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 FORC55_2452 611e8774edb9ff92a5e5a7848a47be38 355 SUPERFAMILY SSF51726 1 353 8.89E-122 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 SMART SM00534 613 800 1.3E-119 T 17-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Gene3D G3DSA:1.10.1420.10 273 565 5.1E-106 T 17-10-2018 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 14 853 25.338 T 17-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 694 710 - T 17-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Gene3D G3DSA:3.40.1170.10 6 128 4.3E-52 T 17-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 PIRSF PIRSF037677 6 826 1.9E-159 T 17-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Pfam PF05192 MutS domain III 276 565 2.6E-42 T 17-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Gene3D G3DSA:3.40.50.300 574 851 5.2E-100 T 17-10-2018 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Pfam PF00488 MutS domain V 616 803 1.7E-86 T 17-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 SMART SM00533 290 597 7.6E-109 T 17-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 SUPERFAMILY SSF48334 274 570 8.63E-93 T 17-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Pfam PF05188 MutS domain II 135 260 4.6E-33 T 17-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Gene3D G3DSA:1.10.1420.10 393 509 5.1E-106 T 17-10-2018 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Gene3D G3DSA:3.30.420.110 134 268 5.7E-36 T 17-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 14 859 0.0 T 17-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Pfam PF05190 MutS family domain IV 434 524 3.6E-29 T 17-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 SUPERFAMILY SSF52540 573 803 7.83E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 Pfam PF01624 MutS domain I 15 126 1.8E-41 T 17-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 SUPERFAMILY SSF53150 121 273 4.71E-41 T 17-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 FORC55_2278 a0c39648fd096423f3eff0e47e77f9d6 861 SUPERFAMILY SSF55271 7 122 6.54E-43 T 17-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 17-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 Pfam PF00347 Ribosomal protein L6 91 164 2.0E-18 T 17-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 Pfam PF00347 Ribosomal protein L6 11 82 6.2E-21 T 17-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 PIRSF PIRSF002162 1 177 2.9E-44 T 17-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 SUPERFAMILY SSF56053 1 82 4.97E-25 T 17-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.195 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 Gene3D G3DSA:3.90.930.12 83 177 3.1E-39 T 17-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 SUPERFAMILY SSF56053 83 177 9.16E-36 T 17-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.5E-74 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 FORC55_0303 d5deb3c8d71af9a10fd51eae8a509563 177 Gene3D G3DSA:3.90.930.12 1 82 3.7E-31 T 17-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 4.6E-48 T 17-10-2018 IPR017926 Glutamine amidotransferase FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 Gene3D G3DSA:3.50.30.20 2 151 1.7E-62 T 17-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 SUPERFAMILY SSF52317 153 377 6.07E-64 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 Gene3D G3DSA:3.40.50.880 152 379 2.5E-76 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 SMART SM01097 3 133 7.0E-94 T 17-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 49.031 T 17-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.8E-40 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.8E-40 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.8E-40 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.8E-40 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.8E-40 T 17-10-2018 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.5E-53 T 17-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 6.6E-150 T 17-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_0483 54cf6a5791f3844b29f22c5301940581 379 SUPERFAMILY SSF52021 4 142 3.66E-58 T 17-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 FORC55_2289 25b96ed2b9f77877a7ce6909b2e03853 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 7.1E-37 T 17-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 FORC55_2289 25b96ed2b9f77877a7ce6909b2e03853 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 6.6E-30 T 17-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 FORC55_2289 25b96ed2b9f77877a7ce6909b2e03853 117 SMART SM00905 4 114 2.0E-49 T 17-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 FORC55_2289 25b96ed2b9f77877a7ce6909b2e03853 117 SUPERFAMILY SSF55620 1 116 2.39E-37 T 17-10-2018 FORC55_2289 25b96ed2b9f77877a7ce6909b2e03853 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.2E-32 T 17-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 FORC55_2289 25b96ed2b9f77877a7ce6909b2e03853 117 Gene3D G3DSA:3.30.1130.10 1 117 2.0E-48 T 17-10-2018 FORC55_3159 48c9bd9adef35965bd93e37fa0c67281 1013 SUPERFAMILY SSF52540 20 991 9.48E-28 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3159 48c9bd9adef35965bd93e37fa0c67281 1013 Gene3D G3DSA:3.40.50.300 1 285 2.0E-43 T 17-10-2018 FORC55_3159 48c9bd9adef35965bd93e37fa0c67281 1013 Pfam PF13558 Putative exonuclease SbcCD, C subunit 913 971 4.5E-11 T 17-10-2018 FORC55_3159 48c9bd9adef35965bd93e37fa0c67281 1013 Pfam PF13476 AAA domain 5 243 3.5E-25 T 17-10-2018 IPR038729 Rad50/SbcC-type AAA domain FORC55_3465 c652e8b6b9342a30ddbeda3cb46be74c 412 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 13 411 6.3E-145 T 17-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC55_3465 c652e8b6b9342a30ddbeda3cb46be74c 412 Gene3D G3DSA:2.40.160.60 22 412 3.4E-120 T 17-10-2018 FORC55_3465 c652e8b6b9342a30ddbeda3cb46be74c 412 SUPERFAMILY SSF56935 22 411 9.16E-93 T 17-10-2018 FORC55_2786 916d9dcc02b5730f4c756adfcfeeead7 589 PIRSF PIRSF028304 1 589 1.5E-188 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like FORC55_2786 916d9dcc02b5730f4c756adfcfeeead7 589 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 589 1.2E-209 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like FORC55_2786 916d9dcc02b5730f4c756adfcfeeead7 589 Pfam PF05947 Type VI secretion system, TssF 5 588 1.9E-199 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like FORC55_0993 bd4f77893a103b603830ca90f8065a5f 528 PIRSF PIRSF006446 1 332 8.3E-119 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 FORC55_0993 bd4f77893a103b603830ca90f8065a5f 528 PIRSF PIRSF006446 347 528 5.1E-33 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 FORC55_0993 bd4f77893a103b603830ca90f8065a5f 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.5E-177 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 FORC55_1963 278505753c0f546fce96bfa9b954f2a6 230 Gene3D G3DSA:3.90.470.20 25 131 7.2E-8 T 17-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 FORC55_1963 278505753c0f546fce96bfa9b954f2a6 230 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 198 1.3E-12 T 17-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 FORC55_1963 278505753c0f546fce96bfa9b954f2a6 230 PRINTS PR01399 Enterobactin synthetase component D signature 48 68 1.2E-9 T 17-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 FORC55_1963 278505753c0f546fce96bfa9b954f2a6 230 PRINTS PR01399 Enterobactin synthetase component D signature 154 170 1.2E-9 T 17-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 FORC55_1963 278505753c0f546fce96bfa9b954f2a6 230 SUPERFAMILY SSF56214 110 194 3.66E-14 T 17-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 FORC55_1469 1961882cc74138703be68856a2f0da79 513 SUPERFAMILY SSF52540 258 498 2.33E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1469 1961882cc74138703be68856a2f0da79 513 Pfam PF00005 ABC transporter 36 185 1.3E-26 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1469 1961882cc74138703be68856a2f0da79 513 Gene3D G3DSA:3.40.50.300 267 508 2.1E-38 T 17-10-2018 FORC55_1469 1961882cc74138703be68856a2f0da79 513 SUPERFAMILY SSF52540 19 240 2.05E-52 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1469 1961882cc74138703be68856a2f0da79 513 ProSitePatterns PS00211 ABC transporters family signature. 414 428 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1469 1961882cc74138703be68856a2f0da79 513 Gene3D G3DSA:3.40.50.300 2 256 7.2E-55 T 17-10-2018 FORC55_1469 1961882cc74138703be68856a2f0da79 513 SMART SM00382 295 490 2.1 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1469 1961882cc74138703be68856a2f0da79 513 SMART SM00382 45 232 3.9E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1469 1961882cc74138703be68856a2f0da79 513 Pfam PF00005 ABC transporter 287 441 5.7E-18 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2274 0fbab60c0b1ec6567d5257fb1538a67e 287 SUPERFAMILY SSF161098 13 265 1.57E-56 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2274 0fbab60c0b1ec6567d5257fb1538a67e 287 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 15 274 1.8E-130 T 17-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 FORC55_2274 0fbab60c0b1ec6567d5257fb1538a67e 287 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 272 2.6E-101 T 17-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 FORC55_2274 0fbab60c0b1ec6567d5257fb1538a67e 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 275 6.0E-15 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2274 0fbab60c0b1ec6567d5257fb1538a67e 287 Gene3D G3DSA:1.10.3720.10 17 275 4.3E-63 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2613 27a3f40e238a07fc6e81715e9325dd96 300 Pfam PF00892 EamA-like transporter family 10 143 4.9E-14 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_2613 27a3f40e238a07fc6e81715e9325dd96 300 SUPERFAMILY SSF103481 187 289 1.15E-8 T 17-10-2018 FORC55_2613 27a3f40e238a07fc6e81715e9325dd96 300 SUPERFAMILY SSF103481 48 144 2.35E-12 T 17-10-2018 FORC55_2613 27a3f40e238a07fc6e81715e9325dd96 300 TIGRFAM TIGR00688 rarD: protein RarD 9 263 9.8E-84 T 17-10-2018 IPR004626 RarD protein GO:0005887 FORC55_3345 4bcfe9801e116c4f5bb7a71e5df09b52 459 Gene3D G3DSA:1.20.1250.20 21 219 2.3E-38 T 17-10-2018 FORC55_3345 4bcfe9801e116c4f5bb7a71e5df09b52 459 PIRSF PIRSF002808 12 452 1.8E-103 T 17-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 FORC55_3345 4bcfe9801e116c4f5bb7a71e5df09b52 459 Pfam PF07690 Major Facilitator Superfamily 36 392 1.7E-43 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_3345 4bcfe9801e116c4f5bb7a71e5df09b52 459 SUPERFAMILY SSF103473 18 440 8.63E-64 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_3345 4bcfe9801e116c4f5bb7a71e5df09b52 459 Gene3D G3DSA:1.20.1250.20 242 443 1.5E-34 T 17-10-2018 FORC55_3264 33dce4b8c8c28733da64888889d439ff 276 SUPERFAMILY SSF52821 2 136 2.36E-35 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_3264 33dce4b8c8c28733da64888889d439ff 276 Gene3D G3DSA:3.40.250.10 1 144 7.4E-42 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_3264 33dce4b8c8c28733da64888889d439ff 276 SUPERFAMILY SSF52821 157 276 3.8E-31 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_3264 33dce4b8c8c28733da64888889d439ff 276 Pfam PF00581 Rhodanese-like domain 7 125 7.9E-14 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3264 33dce4b8c8c28733da64888889d439ff 276 Pfam PF00581 Rhodanese-like domain 156 268 4.8E-8 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3264 33dce4b8c8c28733da64888889d439ff 276 SMART SM00450 6 129 1.2E-18 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3264 33dce4b8c8c28733da64888889d439ff 276 SMART SM00450 153 273 2.3E-12 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_3264 33dce4b8c8c28733da64888889d439ff 276 Gene3D G3DSA:3.40.250.10 156 276 5.5E-36 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_2284 e533c3b1e4190e4c8af0e22da4cfaf79 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.916 T 17-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 FORC55_2284 e533c3b1e4190e4c8af0e22da4cfaf79 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 17-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 FORC55_2284 e533c3b1e4190e4c8af0e22da4cfaf79 158 Pfam PF02542 YgbB family 2 155 1.9E-66 T 17-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 FORC55_2284 e533c3b1e4190e4c8af0e22da4cfaf79 158 Gene3D G3DSA:3.30.1330.50 1 158 9.2E-71 T 17-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 FORC55_2284 e533c3b1e4190e4c8af0e22da4cfaf79 158 SUPERFAMILY SSF69765 1 157 3.14E-66 T 17-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 FORC55_2284 e533c3b1e4190e4c8af0e22da4cfaf79 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 2.6E-69 T 17-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 FORC55_3673 7a9ac5e1b58665f946d083395b833109 510 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 415 2.5E-63 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_3673 7a9ac5e1b58665f946d083395b833109 510 PIRSF PIRSF002741 50 509 3.0E-67 T 17-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 FORC55_3673 7a9ac5e1b58665f946d083395b833109 510 Gene3D G3DSA:3.40.190.10 59 492 6.2E-93 T 17-10-2018 FORC55_3673 7a9ac5e1b58665f946d083395b833109 510 SUPERFAMILY SSF53850 51 502 1.27E-95 T 17-10-2018 FORC55_3673 7a9ac5e1b58665f946d083395b833109 510 Gene3D G3DSA:3.10.105.10 253 480 6.2E-93 T 17-10-2018 FORC55_1553 9cc68b98cbc0231061d90e587bd44ba8 341 Pfam PF02277 Phosphoribosyltransferase 2 339 1.1E-125 T 17-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 FORC55_1553 9cc68b98cbc0231061d90e587bd44ba8 341 Gene3D G3DSA:1.10.1610.10 13 339 1.3E-123 T 17-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 FORC55_1553 9cc68b98cbc0231061d90e587bd44ba8 341 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 341 36.957 T 17-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 FORC55_1553 9cc68b98cbc0231061d90e587bd44ba8 341 Gene3D G3DSA:3.40.50.10210 51 322 1.3E-123 T 17-10-2018 FORC55_1553 9cc68b98cbc0231061d90e587bd44ba8 341 SUPERFAMILY SSF52733 2 340 1.14E-111 T 17-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 FORC55_1553 9cc68b98cbc0231061d90e587bd44ba8 341 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 339 1.1E-135 T 17-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 FORC55_2623 36ae3187adfb1ae60b40f1bf915cee74 312 SUPERFAMILY SSF161098 93 295 6.28E-25 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2623 36ae3187adfb1ae60b40f1bf915cee74 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 4.7E-10 T 17-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain FORC55_2623 36ae3187adfb1ae60b40f1bf915cee74 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 7.8E-30 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2623 36ae3187adfb1ae60b40f1bf915cee74 312 Gene3D G3DSA:1.10.3720.10 86 306 1.9E-24 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 Pfam PF03023 MviN-like protein 30 478 1.1E-144 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 PIRSF PIRSF002869 1 518 1.6E-151 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 PRINTS PR01806 Virulence factor MviN signature 366 385 4.1E-77 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 PRINTS PR01806 Virulence factor MviN signature 54 70 4.1E-77 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 PRINTS PR01806 Virulence factor MviN signature 166 187 4.1E-77 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 PRINTS PR01806 Virulence factor MviN signature 35 54 4.1E-77 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 PRINTS PR01806 Virulence factor MviN signature 142 166 4.1E-77 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 PRINTS PR01806 Virulence factor MviN signature 268 294 4.1E-77 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 PRINTS PR01806 Virulence factor MviN signature 418 435 4.1E-77 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 6.7E-138 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_2056 a2fed2eb8963b5560c18c1f4c08c0f6f 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.784 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ FORC55_0685 f08bdbe7be3d8cd843103c5f10876e6d 186 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 17-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 FORC55_0685 f08bdbe7be3d8cd843103c5f10876e6d 186 SUPERFAMILY SSF52218 1 185 4.19E-58 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0685 f08bdbe7be3d8cd843103c5f10876e6d 186 Gene3D G3DSA:3.40.50.360 1 186 3.2E-63 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0685 f08bdbe7be3d8cd843103c5f10876e6d 186 Pfam PF03358 NADPH-dependent FMN reductase 12 131 7.2E-11 T 17-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 FORC55_0830 8f353eae480666e77d9b5168ec48325d 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 3.4E-198 T 17-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 FORC55_0830 8f353eae480666e77d9b5168ec48325d 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 458 3.6E-20 T 17-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 FORC55_0830 8f353eae480666e77d9b5168ec48325d 476 SUPERFAMILY SSF55604 399 472 8.24E-21 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_0830 8f353eae480666e77d9b5168ec48325d 476 Pfam PF00367 phosphotransferase system, EIIB 403 434 5.2E-12 T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_0830 8f353eae480666e77d9b5168ec48325d 476 Gene3D G3DSA:3.30.1360.60 395 475 1.9E-29 T 17-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 FORC55_0830 8f353eae480666e77d9b5168ec48325d 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.7E-75 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_0830 8f353eae480666e77d9b5168ec48325d 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 17-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 FORC55_0477 08c1a36bce787b0d2bd4054abcc661c8 305 Gene3D G3DSA:3.30.230.20 1 128 9.0E-52 T 17-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 FORC55_0477 08c1a36bce787b0d2bd4054abcc661c8 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.404 T 17-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 FORC55_0477 08c1a36bce787b0d2bd4054abcc661c8 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.1E-107 T 17-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 FORC55_0477 08c1a36bce787b0d2bd4054abcc661c8 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 1.2E-141 T 17-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 FORC55_0477 08c1a36bce787b0d2bd4054abcc661c8 305 SUPERFAMILY SSF54211 3 126 2.28E-42 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0477 08c1a36bce787b0d2bd4054abcc661c8 305 SUPERFAMILY SSF54211 134 278 3.53E-52 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_0477 08c1a36bce787b0d2bd4054abcc661c8 305 Gene3D G3DSA:3.30.1700.10 129 305 1.0E-69 T 17-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 FORC55_2386 4e79b08c123d86dde4974bef2e45b66a 281 Pfam PF13401 AAA domain 42 167 4.8E-23 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2386 4e79b08c123d86dde4974bef2e45b66a 281 Gene3D G3DSA:3.40.50.300 30 183 4.0E-11 T 17-10-2018 FORC55_2386 4e79b08c123d86dde4974bef2e45b66a 281 SUPERFAMILY SSF52540 6 260 1.78E-24 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 Pfam PF00654 Voltage gated chloride channel 87 435 3.3E-95 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 SUPERFAMILY SSF81340 25 451 4.97E-115 T 17-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 PRINTS PR00762 Chloride channel signature 403 422 1.9E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 PRINTS PR00762 Chloride channel signature 181 200 1.9E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 PRINTS PR00762 Chloride channel signature 350 370 1.9E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 PRINTS PR00762 Chloride channel signature 100 117 1.9E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 PRINTS PR00762 Chloride channel signature 385 401 1.9E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 49.462 T 17-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 FORC55_3167 c5cc621baa944a4a645325af37db56e7 468 Gene3D G3DSA:1.10.3080.10 15 459 9.4E-144 T 17-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 FORC55_2734 c2be5f5f1f9260e9178aec9a11fd1a64 507 SUPERFAMILY SSF48452 136 326 7.82E-15 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2734 c2be5f5f1f9260e9178aec9a11fd1a64 507 SMART SM00028 139 172 22.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2734 c2be5f5f1f9260e9178aec9a11fd1a64 507 SMART SM00028 219 252 0.36 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_2734 c2be5f5f1f9260e9178aec9a11fd1a64 507 Gene3D G3DSA:1.25.40.10 30 181 1.7E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2734 c2be5f5f1f9260e9178aec9a11fd1a64 507 Gene3D G3DSA:1.25.40.10 182 329 1.3E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2146 d78c6917124ed9d805199355da29c26c 88 Gene3D G3DSA:1.20.5.780 1 85 9.6E-9 T 17-10-2018 FORC55_2146 d78c6917124ed9d805199355da29c26c 88 Pfam PF08681 Protein of unknown function (DUF1778) 8 83 3.5E-13 T 17-10-2018 IPR014795 Vibrio phage ICP1, Orf50 FORC55_2146 d78c6917124ed9d805199355da29c26c 88 SUPERFAMILY SSF47598 4 81 1.09E-12 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 5.5E-72 T 17-10-2018 FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 0.0021 T 17-10-2018 FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.5E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.5E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.5E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 Gene3D G3DSA:3.40.50.720 1 248 2.8E-83 T 17-10-2018 FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-44 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-44 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.3E-44 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.3E-44 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-44 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-44 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 FORC55_1245 f089b5970b17ecfb88a47b59c7cd668f 252 SUPERFAMILY SSF51735 6 244 2.27E-82 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1563 976ca85b56f77c36d8da65587a9a6331 259 Pfam PF04607 Region found in RelA / SpoT proteins 107 206 1.4E-4 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 FORC55_1563 976ca85b56f77c36d8da65587a9a6331 259 Gene3D G3DSA:3.30.460.10 72 196 3.0E-6 T 17-10-2018 FORC55_1563 976ca85b56f77c36d8da65587a9a6331 259 SUPERFAMILY SSF81301 68 224 2.62E-16 T 17-10-2018 FORC55_1805 041560aa8b95809de7969a77d9a6ac90 291 SUPERFAMILY SSF64383 153 285 3.27E-49 T 17-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 FORC55_1805 041560aa8b95809de7969a77d9a6ac90 291 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 154 280 1.2E-46 T 17-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 FORC55_1805 041560aa8b95809de7969a77d9a6ac90 291 Gene3D G3DSA:3.30.1400.10 149 289 8.6E-50 T 17-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 FORC55_1805 041560aa8b95809de7969a77d9a6ac90 291 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 281 6.9E-121 T 17-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 FORC55_1805 041560aa8b95809de7969a77d9a6ac90 291 SMART SM00771 151 281 7.1E-76 T 17-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 FORC55_1805 041560aa8b95809de7969a77d9a6ac90 291 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 283 22.834 T 17-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 FORC55_1805 041560aa8b95809de7969a77d9a6ac90 291 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 154 285 3.0E-74 T 17-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 FORC55_2121 c5a702d5171f050c0e08c2b7ae978c00 544 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 1.7E-132 T 17-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 FORC55_2121 c5a702d5171f050c0e08c2b7ae978c00 544 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 539 1.3E-167 T 17-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 FORC55_1977 7216b1df7eb20dd6db84912f07d5e048 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 356 2.1E-138 T 17-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 FORC55_1977 7216b1df7eb20dd6db84912f07d5e048 446 Pfam PF13742 OB-fold nucleic acid binding domain 11 104 2.2E-29 T 17-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 FORC55_1977 7216b1df7eb20dd6db84912f07d5e048 446 Pfam PF02601 Exonuclease VII, large subunit 127 440 2.3E-103 T 17-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 FORC55_1977 7216b1df7eb20dd6db84912f07d5e048 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 444 31.922 T 17-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 FORC55_1262 84269b2d280ec9650fe7821148bd2ceb 233 SMART SM00382 38 232 8.8E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1262 84269b2d280ec9650fe7821148bd2ceb 233 Gene3D G3DSA:3.40.50.300 7 233 1.5E-73 T 17-10-2018 FORC55_1262 84269b2d280ec9650fe7821148bd2ceb 233 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1262 84269b2d280ec9650fe7821148bd2ceb 233 SUPERFAMILY SSF52540 9 231 6.23E-75 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1262 84269b2d280ec9650fe7821148bd2ceb 233 Pfam PF00005 ABC transporter 29 177 2.3E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 624 1.1E-301 T 17-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 Pfam PF02780 Transketolase, C-terminal domain 506 616 1.0E-27 T 17-10-2018 IPR033248 Transketolase, C-terminal domain FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.7E-118 T 17-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 SUPERFAMILY SSF52518 8 381 4.84E-78 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 SUPERFAMILY SSF52922 492 624 5.76E-30 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 625 45.926 T 17-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 SUPERFAMILY SSF52518 317 503 1.74E-57 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 SMART SM00861 319 483 4.8E-64 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 Gene3D G3DSA:3.40.50.920 495 626 1.6E-42 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 6.1E-38 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 17-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 FORC55_1880 c3d5631b5f50877c203dc60d069d8daf 626 Gene3D G3DSA:3.40.50.970 317 489 9.9E-66 T 17-10-2018 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 Gene3D G3DSA:3.40.710.10 32 282 5.7E-91 T 17-10-2018 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 7.0E-26 T 17-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 SMART SM00936 282 372 2.1E-36 T 17-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 SUPERFAMILY SSF56601 12 282 4.14E-87 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 Gene3D G3DSA:2.60.410.10 283 372 1.4E-29 T 17-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 SUPERFAMILY SSF69189 282 374 1.88E-26 T 17-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.8E-17 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.8E-17 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.8E-17 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_1826 72855f9d762ed2c4feffa42fc234fd57 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 262 5.3E-93 T 17-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 FORC55_0022 84185bee22b2367c54b530ed09b1d42b 200 Pfam PF01323 DSBA-like thioredoxin domain 41 187 9.0E-30 T 17-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 FORC55_0022 84185bee22b2367c54b530ed09b1d42b 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 FORC55_0022 84185bee22b2367c54b530ed09b1d42b 200 Gene3D G3DSA:3.40.30.10 17 200 1.8E-56 T 17-10-2018 FORC55_0022 84185bee22b2367c54b530ed09b1d42b 200 PIRSF PIRSF001488 1 200 2.7E-75 T 17-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL FORC55_0022 84185bee22b2367c54b530ed09b1d42b 200 SUPERFAMILY SSF52833 20 197 4.11E-45 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_1362 c018989517b5791ca886dd18f69aeb60 372 Pfam PF08495 FIST N domain 10 202 9.4E-27 T 17-10-2018 IPR013702 FIST domain, N-terminal FORC55_1362 c018989517b5791ca886dd18f69aeb60 372 SMART SM01204 204 352 1.0E-29 T 17-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 FORC55_1362 c018989517b5791ca886dd18f69aeb60 372 Pfam PF10442 FIST C domain 207 351 1.0E-16 T 17-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 FORC55_1362 c018989517b5791ca886dd18f69aeb60 372 SMART SM00897 4 203 1.6E-41 T 17-10-2018 IPR013702 FIST domain, N-terminal FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 SUPERFAMILY SSF52374 1 313 1.98E-103 T 17-10-2018 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 Pfam PF09190 DALR domain 341 402 9.4E-25 T 17-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 Gene3D G3DSA:1.20.120.640 306 459 2.3E-51 T 17-10-2018 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 SUPERFAMILY SSF47323 316 458 5.1E-41 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 5.3E-193 T 17-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 17-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 17-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 17-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 17-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 Gene3D G3DSA:3.40.50.620 1 305 7.9E-139 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.6E-142 T 17-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.208 T 17-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 FORC55_0989 757ef38e42b9b21bc5c103f6e404b560 459 SMART SM00840 341 402 1.8E-27 T 17-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 17-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:2.40.270.10 790 832 1.7E-6 T 17-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:2.40.270.10 998 1241 6.6E-89 T 17-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 17-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:2.40.50.150 833 954 3.6E-44 T 17-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:3.90.1110.10 157 269 3.2E-27 T 17-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.293 T 17-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.8E-27 T 17-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 17-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 9.9E-24 T 17-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 17-10-2018 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Pfam PF04563 RNA polymerase beta subunit 26 500 6.4E-58 T 17-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 3.9E-157 T 17-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 336 454 1.6E-17 T 17-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 235 1.1E-7 T 17-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:3.90.1100.10 19 156 1.4E-48 T 17-10-2018 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:3.90.1110.10 302 441 2.2E-35 T 17-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:3.90.1100.10 647 713 2.8E-21 T 17-10-2018 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:3.90.1100.10 442 621 2.1E-65 T 17-10-2018 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 SUPERFAMILY SSF64484 11 1340 0.0 T 17-10-2018 FORC55_2456 89a27ffea09cbf29e570e8dcf8592fd1 1341 Gene3D G3DSA:2.40.50.100 714 788 9.5E-32 T 17-10-2018 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 SUPERFAMILY SSF53474 402 651 8.48E-38 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 Gene3D G3DSA:2.130.10.120 73 392 1.6E-150 T 17-10-2018 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 534 8.1E-40 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 431 449 8.1E-40 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 485 504 8.1E-40 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 587 8.1E-40 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 457 481 8.1E-40 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 612 8.1E-40 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 SUPERFAMILY SSF50993 22 388 3.92E-25 T 17-10-2018 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 23 382 5.8E-32 T 17-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 Gene3D G3DSA:3.40.50.1820 23 653 1.6E-150 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2743 40f81489dcbcd23af979bb0f1113b7d3 665 Pfam PF00326 Prolyl oligopeptidase family 446 656 5.9E-61 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 FORC55_2153 a598f9b3dc3866a78a78e69f1d7af5b2 93 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 91 1.5E-15 T 17-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 FORC55_2153 a598f9b3dc3866a78a78e69f1d7af5b2 93 Pfam PF07178 TraL protein 5 91 4.1E-29 T 17-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 FORC55_2836 861163646bdafa18d8881c00a37666a6 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 112 7.9E-28 T 17-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like FORC55_3240 ec2a19089fc6d500ad499996be15944b 465 PIRSF PIRSF000521 17 163 1.5E-4 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3240 ec2a19089fc6d500ad499996be15944b 465 PIRSF PIRSF000521 155 457 1.3E-19 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3240 ec2a19089fc6d500ad499996be15944b 465 Pfam PF00202 Aminotransferase class-III 61 454 8.5E-85 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3240 ec2a19089fc6d500ad499996be15944b 465 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 270 307 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 FORC55_3240 ec2a19089fc6d500ad499996be15944b 465 Gene3D G3DSA:3.40.640.10 94 353 1.9E-120 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3240 ec2a19089fc6d500ad499996be15944b 465 Gene3D G3DSA:3.90.1150.10 66 449 1.9E-120 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3240 ec2a19089fc6d500ad499996be15944b 465 SUPERFAMILY SSF53383 59 454 1.92E-105 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2516 50e610398a9fdf95b8c6af312a4afa08 106 Pfam PF01909 Nucleotidyltransferase domain 21 84 1.2E-7 T 17-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 FORC55_2516 50e610398a9fdf95b8c6af312a4afa08 106 Gene3D G3DSA:3.30.460.10 5 106 1.5E-17 T 17-10-2018 FORC55_2516 50e610398a9fdf95b8c6af312a4afa08 106 SUPERFAMILY SSF81301 17 97 1.64E-12 T 17-10-2018 FORC55_0856 64bd27a1956d6363fe5450b22e3a9f82 566 SUPERFAMILY SSF56801 13 553 4.84E-147 T 17-10-2018 FORC55_0856 64bd27a1956d6363fe5450b22e3a9f82 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_0856 64bd27a1956d6363fe5450b22e3a9f82 566 Pfam PF00501 AMP-binding enzyme 29 461 8.8E-106 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_0856 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:3.40.50.12780 10 457 1.4E-115 T 17-10-2018 FORC55_0856 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:3.30.300.310 458 559 2.7E-28 T 17-10-2018 FORC55_0856 64bd27a1956d6363fe5450b22e3a9f82 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.8E-16 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain FORC55_1373 9b77d57d201307db15e067227d32adee 315 Pfam PF00582 Universal stress protein family 4 148 9.3E-13 T 17-10-2018 IPR006016 UspA FORC55_1373 9b77d57d201307db15e067227d32adee 315 Pfam PF00582 Universal stress protein family 176 301 9.7E-16 T 17-10-2018 IPR006016 UspA FORC55_1373 9b77d57d201307db15e067227d32adee 315 Gene3D G3DSA:3.40.50.12370 1 312 3.2E-112 T 17-10-2018 FORC55_1373 9b77d57d201307db15e067227d32adee 315 SUPERFAMILY SSF52402 4 159 1.26E-24 T 17-10-2018 FORC55_1373 9b77d57d201307db15e067227d32adee 315 SUPERFAMILY SSF52402 173 309 3.85E-24 T 17-10-2018 FORC55_1633 a4a5a6fee6bcaa9eac944ffb87c9db0c 548 SUPERFAMILY SSF53383 26 530 1.27E-113 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1633 a4a5a6fee6bcaa9eac944ffb87c9db0c 548 Gene3D G3DSA:3.40.640.10 122 387 4.6E-111 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1633 a4a5a6fee6bcaa9eac944ffb87c9db0c 548 Gene3D G3DSA:3.90.1150.170 50 524 4.6E-111 T 17-10-2018 FORC55_1633 a4a5a6fee6bcaa9eac944ffb87c9db0c 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 7 527 1.9E-289 T 17-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 FORC55_1633 a4a5a6fee6bcaa9eac944ffb87c9db0c 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 63 442 2.8E-53 T 17-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 FORC55_1348 aa4209fe936dccfcd3cdca056e4b9129 395 Pfam PF05144 Phage replication protein CRI 64 263 5.0E-8 T 17-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 FORC55_1348 aa4209fe936dccfcd3cdca056e4b9129 395 Pfam PF05155 Phage X family 298 383 3.4E-23 T 17-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 FORC55_1348 aa4209fe936dccfcd3cdca056e4b9129 395 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 78 382 2.2E-10 T 17-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 FORC55_1343 aa4209fe936dccfcd3cdca056e4b9129 395 Pfam PF05144 Phage replication protein CRI 64 263 5.0E-8 T 17-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 FORC55_1343 aa4209fe936dccfcd3cdca056e4b9129 395 Pfam PF05155 Phage X family 298 383 3.4E-23 T 17-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 FORC55_1343 aa4209fe936dccfcd3cdca056e4b9129 395 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 78 382 2.2E-10 T 17-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 SUPERFAMILY SSF52540 4 243 1.38E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 SUPERFAMILY SSF52540 252 459 1.55E-43 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 Pfam PF00005 ABC transporter 280 415 1.3E-23 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 Gene3D G3DSA:3.40.50.300 263 460 2.2E-44 T 17-10-2018 FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 Gene3D G3DSA:3.40.50.300 2 262 2.4E-53 T 17-10-2018 FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 SMART SM00382 288 460 6.9E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 SMART SM00382 29 221 1.0E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 Pfam PF00005 ABC transporter 21 173 4.7E-21 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3676 875d9e04a08cc80a1887230ce9575884 460 ProSitePatterns PS00211 ABC transporters family signature. 387 401 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2782 5ccb2da0c910292fc290f2c102297bae 306 Gene3D G3DSA:1.25.40.10 2 296 5.3E-21 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2782 5ccb2da0c910292fc290f2c102297bae 306 SUPERFAMILY SSF81901 98 261 4.71E-14 T 17-10-2018 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 Gene3D G3DSA:3.40.50.460 143 252 3.5E-117 T 17-10-2018 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.523 T 17-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PIRSF PIRSF000532 1 320 1.3E-129 T 17-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 17-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 4.6E-131 T 17-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 Pfam PF00365 Phosphofructokinase 4 276 3.7E-110 T 17-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 Gene3D G3DSA:3.40.50.450 4 287 3.5E-117 T 17-10-2018 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 SUPERFAMILY SSF53784 3 315 4.84E-114 T 17-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0202 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 6.6E-84 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 FORC55_0657 53cd75e211507ec800cf54ac5424a078 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 17-10-2018 IPR019776 Flagellar basal body rod protein, conserved site FORC55_0657 53cd75e211507ec800cf54ac5424a078 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.5E-12 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain FORC55_0657 53cd75e211507ec800cf54ac5424a078 138 Pfam PF00460 Flagella basal body rod protein 7 32 2.6E-7 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 FORC55_0657 53cd75e211507ec800cf54ac5424a078 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 7.3E-52 T 17-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 2.0E-48 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 2.0E-48 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 2.0E-48 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.0E-48 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 2.0E-48 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 2.0E-48 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.651 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.1E-63 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 Gene3D G3DSA:3.90.226.10 2 318 9.9E-121 T 17-10-2018 FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 SUPERFAMILY SSF52096 5 318 1.83E-103 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_0617 c759fbf3954d5c4539403b113f21a126 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.9E-163 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 Gene3D G3DSA:1.10.10.10 1 54 5.2E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 Gene3D G3DSA:3.30.70.920 55 137 1.9E-18 T 17-10-2018 FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 Pfam PF01037 Lrp/AsnC ligand binding domain 68 140 1.5E-14 T 17-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 SUPERFAMILY SSF54909 63 146 3.89E-14 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.5E-15 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.5E-15 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.5E-15 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 SUPERFAMILY SSF46785 1 59 5.06E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 SMART SM00344 1 110 1.4E-31 T 17-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 FORC55_1052 85ec7fde079f8bc1b93bf6c85ebf7807 147 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 9.7E-17 T 17-10-2018 FORC55_0580 ef2db9683d55c156e13a38b32cd7ab28 362 Gene3D G3DSA:3.40.630.10 28 329 2.8E-95 T 17-10-2018 FORC55_0580 ef2db9683d55c156e13a38b32cd7ab28 362 SUPERFAMILY SSF53187 34 328 8.93E-77 T 17-10-2018 FORC55_0580 ef2db9683d55c156e13a38b32cd7ab28 362 PIRSF PIRSF039012 15 334 3.5E-93 T 17-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 FORC55_0580 ef2db9683d55c156e13a38b32cd7ab28 362 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 59 326 2.8E-69 T 17-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 FORC55_0582 c49c3f283b39fc15e3a98a0c50aeb490 147 SUPERFAMILY SSF50630 6 140 5.16E-46 T 17-10-2018 IPR021109 Aspartic peptidase domain superfamily FORC55_0582 c49c3f283b39fc15e3a98a0c50aeb490 147 Pfam PF05618 Putative ATP-dependant zinc protease 6 141 2.2E-51 T 17-10-2018 FORC55_0582 c49c3f283b39fc15e3a98a0c50aeb490 147 Gene3D G3DSA:2.40.70.10 3 133 4.2E-35 T 17-10-2018 IPR021109 Aspartic peptidase domain superfamily FORC55_2986 dca22f689b497544aff64a54d1ab1771 435 Pfam PF00464 Serine hydroxymethyltransferase 24 399 9.6E-175 T 17-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 FORC55_2986 dca22f689b497544aff64a54d1ab1771 435 SUPERFAMILY SSF53383 14 434 1.51E-180 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2986 dca22f689b497544aff64a54d1ab1771 435 Gene3D G3DSA:3.90.1150.10 25 406 3.6E-187 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_2986 dca22f689b497544aff64a54d1ab1771 435 Gene3D G3DSA:3.40.640.10 51 302 3.6E-187 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2986 dca22f689b497544aff64a54d1ab1771 435 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 236 252 - T 17-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 FORC55_2986 dca22f689b497544aff64a54d1ab1771 435 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 21 435 52.789 T 17-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 FORC55_2986 dca22f689b497544aff64a54d1ab1771 435 PIRSF PIRSF000412 6 435 1.8E-168 T 17-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 Gene3D G3DSA:3.40.140.20 220 373 1.1E-57 T 17-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 PIRSF PIRSF000414 1 530 3.7E-228 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 SUPERFAMILY SSF53927 222 530 3.31E-129 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 530 4.3E-258 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 SMART SM00798 137 462 1.3E-214 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 Pfam PF02142 MGS-like domain 19 132 3.2E-30 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.326 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 1.6E-117 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 SUPERFAMILY SSF52335 7 196 9.03E-72 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 Gene3D G3DSA:3.40.140.20 394 530 4.8E-59 T 17-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 SMART SM00851 19 132 4.8E-61 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain FORC55_2505 059105ec2bf2396851f3ded4304401cb 530 Gene3D G3DSA:3.40.50.1380 1 200 9.8E-87 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily FORC55_0651 c869b362f53a8b66bec811633edca3cb 141 SUPERFAMILY SSF140566 1 113 3.27E-22 T 17-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 FORC55_0651 c869b362f53a8b66bec811633edca3cb 141 Gene3D G3DSA:1.20.58.300 1 113 5.7E-8 T 17-10-2018 FORC55_0651 c869b362f53a8b66bec811633edca3cb 141 Pfam PF05130 FlgN protein 2 131 1.9E-26 T 17-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 SUPERFAMILY SSF54523 35 141 2.88E-38 T 17-10-2018 FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 1.1E-9 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 Pfam PF08334 Type II secretion system (T2SS), protein G 32 140 7.6E-43 T 17-10-2018 IPR013545 Type II secretion system protein G FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 Gene3D G3DSA:3.30.700.10 32 140 1.2E-44 T 17-10-2018 FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 141 2.4E-58 T 17-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.6E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 2.9E-22 T 17-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 FORC55_0155 27fba2e0a2d0fc70ea7964a8c69dc9c6 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 2.9E-22 T 17-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 FORC55_0358 c6e32285cd28e04215f1cfd9caf7b948 320 Gene3D G3DSA:1.20.58.1130 10 207 1.0E-85 T 17-10-2018 FORC55_0358 c6e32285cd28e04215f1cfd9caf7b948 320 Pfam PF01699 Sodium/calcium exchanger protein 6 145 6.0E-27 T 17-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 FORC55_0358 c6e32285cd28e04215f1cfd9caf7b948 320 Pfam PF01699 Sodium/calcium exchanger protein 176 317 7.0E-30 T 17-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 FORC55_0358 c6e32285cd28e04215f1cfd9caf7b948 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 312 5.4E-84 T 17-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 FORC55_0358 c6e32285cd28e04215f1cfd9caf7b948 320 Gene3D G3DSA:1.20.1420.30 36 310 1.0E-85 T 17-10-2018 FORC55_2606 2390b3fe9c1950e86812c38d2eafcb7b 319 SUPERFAMILY SSF53807 53 312 4.71E-50 T 17-10-2018 FORC55_2606 2390b3fe9c1950e86812c38d2eafcb7b 319 Gene3D G3DSA:3.40.50.1980 142 314 1.2E-45 T 17-10-2018 FORC55_2606 2390b3fe9c1950e86812c38d2eafcb7b 319 Pfam PF01497 Periplasmic binding protein 56 286 1.1E-19 T 17-10-2018 IPR002491 ABC transporter periplasmic binding domain FORC55_2606 2390b3fe9c1950e86812c38d2eafcb7b 319 Gene3D G3DSA:3.40.50.1980 41 140 1.8E-30 T 17-10-2018 FORC55_2606 2390b3fe9c1950e86812c38d2eafcb7b 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 104 119 6.8E-6 T 17-10-2018 FORC55_2606 2390b3fe9c1950e86812c38d2eafcb7b 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 293 306 6.8E-6 T 17-10-2018 FORC55_2606 2390b3fe9c1950e86812c38d2eafcb7b 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 73 91 6.8E-6 T 17-10-2018 FORC55_0790 4e911c5a4c63d3df159486c73f71b7f9 250 Pfam PF01578 Cytochrome C assembly protein 30 184 9.4E-30 T 17-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 FORC55_0790 4e911c5a4c63d3df159486c73f71b7f9 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 6.6E-65 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0790 4e911c5a4c63d3df159486c73f71b7f9 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 6.6E-65 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0790 4e911c5a4c63d3df159486c73f71b7f9 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 6.6E-65 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0790 4e911c5a4c63d3df159486c73f71b7f9 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 6.6E-65 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0790 4e911c5a4c63d3df159486c73f71b7f9 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 6.6E-65 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0790 4e911c5a4c63d3df159486c73f71b7f9 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 6.6E-65 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0790 4e911c5a4c63d3df159486c73f71b7f9 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 6.3E-85 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0946 9cd6133808c53908f846b5f5f3e6c86b 178 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 4.3E-26 T 17-10-2018 IPR000182 GNAT domain FORC55_0946 9cd6133808c53908f846b5f5f3e6c86b 178 Gene3D G3DSA:3.40.630.30 1 178 1.2E-49 T 17-10-2018 FORC55_0946 9cd6133808c53908f846b5f5f3e6c86b 178 SUPERFAMILY SSF55729 2 177 1.53E-45 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3658 935a68ac994c43351f9445deaf231265 636 SMART SM00267 226 393 3.7E-13 T 17-10-2018 IPR000160 GGDEF domain FORC55_3658 935a68ac994c43351f9445deaf231265 636 SUPERFAMILY SSF55073 244 387 8.63E-17 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3658 935a68ac994c43351f9445deaf231265 636 Gene3D G3DSA:3.30.70.270 223 391 6.5E-21 T 17-10-2018 FORC55_3658 935a68ac994c43351f9445deaf231265 636 SUPERFAMILY SSF141868 411 635 2.48E-41 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_3658 935a68ac994c43351f9445deaf231265 636 Gene3D G3DSA:3.30.1040.50 102 151 8.6E-18 T 17-10-2018 FORC55_3658 935a68ac994c43351f9445deaf231265 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 6.1E-37 T 17-10-2018 IPR032244 LapD/MoxY, periplasmic domain FORC55_3658 935a68ac994c43351f9445deaf231265 636 Gene3D G3DSA:3.20.20.450 401 636 2.9E-40 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_3658 935a68ac994c43351f9445deaf231265 636 Pfam PF00563 EAL domain 411 634 4.6E-38 T 17-10-2018 IPR001633 EAL domain FORC55_3658 935a68ac994c43351f9445deaf231265 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 385 3.9E-13 T 17-10-2018 IPR000160 GGDEF domain FORC55_3658 935a68ac994c43351f9445deaf231265 636 SMART SM00052 403 635 7.6E-11 T 17-10-2018 IPR001633 EAL domain FORC55_0881 23d62a57073db27e0f29ff055b1c05b7 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.9E-24 T 17-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 FORC55_0881 23d62a57073db27e0f29ff055b1c05b7 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 2.9E-72 T 17-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 FORC55_0881 23d62a57073db27e0f29ff055b1c05b7 401 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 397 1.9E-137 T 17-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 FORC55_0881 23d62a57073db27e0f29ff055b1c05b7 401 Pfam PF07670 Nucleoside recognition 89 184 1.7E-7 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 FORC55_3148 d7c7c652f6a25680a96056ae3cc3738a 80 SUPERFAMILY SSF47598 4 46 1.78E-9 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 FORC55_3148 d7c7c652f6a25680a96056ae3cc3738a 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 3.3E-30 T 17-10-2018 IPR022789 Antitoxin ParD FORC55_3148 d7c7c652f6a25680a96056ae3cc3738a 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 6.2E-38 T 17-10-2018 IPR022789 Antitoxin ParD FORC55_3148 d7c7c652f6a25680a96056ae3cc3738a 80 Gene3D G3DSA:1.10.8.1250 10 80 2.5E-25 T 17-10-2018 IPR038296 Antitoxin ParD superfamily FORC55_3005 d7c7c652f6a25680a96056ae3cc3738a 80 SUPERFAMILY SSF47598 4 46 1.78E-9 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 FORC55_3005 d7c7c652f6a25680a96056ae3cc3738a 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 3.3E-30 T 17-10-2018 IPR022789 Antitoxin ParD FORC55_3005 d7c7c652f6a25680a96056ae3cc3738a 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 6.2E-38 T 17-10-2018 IPR022789 Antitoxin ParD FORC55_3005 d7c7c652f6a25680a96056ae3cc3738a 80 Gene3D G3DSA:1.10.8.1250 10 80 2.5E-25 T 17-10-2018 IPR038296 Antitoxin ParD superfamily FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 SUPERFAMILY SSF56235 4 517 9.45E-128 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 Gene3D G3DSA:3.60.20.40 334 518 2.4E-56 T 17-10-2018 FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 Gene3D G3DSA:1.10.246.130 229 333 2.7E-10 T 17-10-2018 FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 Pfam PF01019 Gamma-glutamyltranspeptidase 19 514 6.2E-130 T 17-10-2018 FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 26 51 2.1E-14 T 17-10-2018 FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 95 113 2.1E-14 T 17-10-2018 FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 114 133 2.1E-14 T 17-10-2018 FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 2.1E-14 T 17-10-2018 FORC55_3192 7fd93e97a7cb5dc6bf16048b572f0daf 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 333 351 2.1E-14 T 17-10-2018 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 7.0E-175 T 17-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 SUPERFAMILY SSF48168 10 221 8.11E-74 T 17-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 Pfam PF03477 ATP cone domain 6 92 8.5E-19 T 17-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 SUPERFAMILY SSF51998 222 739 3.66E-167 T 17-10-2018 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 Gene3D G3DSA:3.20.70.20 78 742 5.2E-156 T 17-10-2018 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 4.2E-121 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.0E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.0E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.0E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.0E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.0E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.0E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1537 6069867a4394a14fb883f253b6f9236f 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.3E-11 T 17-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 2.0E-84 T 17-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 SUPERFAMILY SSF111326 11 557 1.83E-260 T 17-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 Gene3D G3DSA:3.40.50.10730 147 351 1.7E-257 T 17-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 PIRSF PIRSF001423 1 563 2.8E-295 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 Gene3D G3DSA:3.40.1770.10 22 544 1.7E-257 T 17-10-2018 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 2.0E-293 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.648 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 Pfam PF17392 Urocanase C-terminal domain 354 548 7.5E-92 T 17-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 Pfam PF17391 Urocanase N-terminal domain 17 143 6.5E-63 T 17-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1581 fe385beb8ad79e6296b8f0cecf6c14b1 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 17-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 Pfam PF03882 MukF winged-helix domain 10 122 1.3E-55 T 17-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 Pfam PF17192 MukF middle domain 126 286 2.8E-80 T 17-10-2018 IPR033440 Chromosome partition protein MukF, middle domain FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 53.63 T 17-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 Gene3D G3DSA:1.10.10.10 29 123 1.3E-47 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 Gene3D G3DSA:1.20.58.590 124 316 9.7E-80 T 17-10-2018 IPR036141 MukF, middle domain superfamily FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 Gene3D G3DSA:1.10.225.40 358 445 2.4E-37 T 17-10-2018 IPR038198 MukF, C-terminal domain superfamily FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 Pfam PF17193 MukF C-terminal domain 288 445 8.8E-78 T 17-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 PIRSF PIRSF018282 1 445 2.2E-243 T 17-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 SUPERFAMILY SSF46785 13 123 6.8E-46 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1046 e10240ab3013acbd15145062b631e2a1 445 SUPERFAMILY SSF140570 124 286 6.93E-79 T 17-10-2018 IPR036141 MukF, middle domain superfamily FORC55_0696 721228daca929f5868fe84ea22eefdab 88 SUPERFAMILY SSF51569 1 84 1.88E-15 T 17-10-2018 FORC55_0696 721228daca929f5868fe84ea22eefdab 88 Gene3D G3DSA:3.20.20.70 1 87 4.3E-19 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0696 721228daca929f5868fe84ea22eefdab 88 Pfam PF00701 Dihydrodipicolinate synthetase family 1 84 4.0E-19 T 17-10-2018 IPR002220 DapA-like GO:0016829 FORC55_3236 9c86c23d5a2564fe756fabe2540fbc3b 566 SUPERFAMILY SSF161098 23 277 1.44E-45 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3236 9c86c23d5a2564fe756fabe2540fbc3b 566 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 25 566 4.5E-242 T 17-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative FORC55_3236 9c86c23d5a2564fe756fabe2540fbc3b 566 Gene3D G3DSA:1.10.3720.10 302 553 2.1E-30 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3236 9c86c23d5a2564fe756fabe2540fbc3b 566 Gene3D G3DSA:1.10.3720.10 20 283 3.3E-52 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3236 9c86c23d5a2564fe756fabe2540fbc3b 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 386 552 3.6E-10 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3236 9c86c23d5a2564fe756fabe2540fbc3b 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 279 3.8E-10 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3236 9c86c23d5a2564fe756fabe2540fbc3b 566 SUPERFAMILY SSF161098 297 547 4.06E-33 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0935 cbc6cfe1306a1e2c575e48aa198c1f7c 530 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 1.0E-299 T 17-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 FORC55_0935 cbc6cfe1306a1e2c575e48aa198c1f7c 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 515 1.4E-294 T 17-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 FORC55_0935 cbc6cfe1306a1e2c575e48aa198c1f7c 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 530 375.366 T 17-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 FORC55_1950 bd5576487b8cf223abfd616134b5e168 98 PIRSF PIRSF002736 1 97 8.8E-42 T 17-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 FORC55_1950 bd5576487b8cf223abfd616134b5e168 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 80 5.0E-34 T 17-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 FORC55_1950 bd5576487b8cf223abfd616134b5e168 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 27.943 T 17-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 FORC55_1950 bd5576487b8cf223abfd616134b5e168 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.9E-35 T 17-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 FORC55_1950 bd5576487b8cf223abfd616134b5e168 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 86 8.9E-32 T 17-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 Gene3D G3DSA:3.30.565.10 631 787 8.4E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 Gene3D G3DSA:3.30.450.20 390 528 3.4E-5 T 17-10-2018 FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 SUPERFAMILY SSF47384 559 629 1.16E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 SMART SM00387 673 782 6.1E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 674 781 5.2E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 742 760 1.0E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 731 741 1.0E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 727 1.0E-7 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 SMART SM00304 344 396 3.4E-4 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 SMART SM00388 563 630 6.1E-4 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 Gene3D G3DSA:1.10.287.130 539 625 2.7E-16 T 17-10-2018 FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 PIRSF PIRSF037119 1 784 0.0 T 17-10-2018 IPR017116 Signal transduction histidine kinase, PgtB FORC55_3343 7edaef5b981bd6d44864a2937e333670 788 SUPERFAMILY SSF55874 621 778 2.1E-32 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0614 37b4dc3934eb47518eeec14a1ad014f6 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 373 5.9E-132 T 17-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 FORC55_0614 37b4dc3934eb47518eeec14a1ad014f6 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 43.36 T 17-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 FORC55_0614 37b4dc3934eb47518eeec14a1ad014f6 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 1.8E-143 T 17-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 FORC55_0614 37b4dc3934eb47518eeec14a1ad014f6 379 SUPERFAMILY SSF53756 6 378 1.93E-31 T 17-10-2018 FORC55_3219 f097e1cc5c54fefba77aa9ebfecebab5 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 193 1.6E-14 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal FORC55_3219 f097e1cc5c54fefba77aa9ebfecebab5 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 77 1.7E-13 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 FORC55_3219 f097e1cc5c54fefba77aa9ebfecebab5 222 SUPERFAMILY SSF52833 4 81 6.87E-22 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_3219 f097e1cc5c54fefba77aa9ebfecebab5 222 Gene3D G3DSA:3.40.30.10 2 202 2.8E-85 T 17-10-2018 FORC55_3219 f097e1cc5c54fefba77aa9ebfecebab5 222 Gene3D G3DSA:1.20.1050.10 84 192 2.8E-85 T 17-10-2018 FORC55_3219 f097e1cc5c54fefba77aa9ebfecebab5 222 SUPERFAMILY SSF47616 74 201 1.08E-37 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily FORC55_3586 d3dbe869f689cf5b05efc8553f6e0947 204 Gene3D G3DSA:3.90.850.10 7 204 1.9E-47 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 FORC55_3586 d3dbe869f689cf5b05efc8553f6e0947 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 2.0E-28 T 17-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 FORC55_3586 d3dbe869f689cf5b05efc8553f6e0947 204 SUPERFAMILY SSF56529 12 189 1.03E-46 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 FORC55_2926 45d43487c139064517c1add0eebd559d 562 Pfam PF03235 Protein of unknown function DUF262 12 231 2.4E-38 T 17-10-2018 IPR004919 Domain of unknown function DUF262 FORC55_2926 45d43487c139064517c1add0eebd559d 562 Pfam PF07510 Protein of unknown function (DUF1524) 421 550 4.5E-25 T 17-10-2018 IPR011089 Domain of unknown function DUF1524 FORC55_1299 fff88427c31652b97a94b2756777a7b7 240 Gene3D G3DSA:3.40.50.300 4 237 3.3E-51 T 17-10-2018 FORC55_1299 fff88427c31652b97a94b2756777a7b7 240 Pfam PF00005 ABC transporter 27 164 4.5E-27 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1299 fff88427c31652b97a94b2756777a7b7 240 SUPERFAMILY SSF52540 5 216 6.96E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1299 fff88427c31652b97a94b2756777a7b7 240 SMART SM00382 29 201 3.5E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1299 fff88427c31652b97a94b2756777a7b7 240 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0877 c3fae666cbab29732a6a0cc6072dcedf 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 2.8E-86 T 17-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 FORC55_0877 c3fae666cbab29732a6a0cc6072dcedf 220 Gene3D G3DSA:3.30.750.120 1 112 6.5E-36 T 17-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily FORC55_0877 c3fae666cbab29732a6a0cc6072dcedf 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 29.517 T 17-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 FORC55_0877 c3fae666cbab29732a6a0cc6072dcedf 220 Gene3D G3DSA:2.160.20.70 113 220 1.2E-32 T 17-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 FORC55_0877 c3fae666cbab29732a6a0cc6072dcedf 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 7.8E-33 T 17-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 FORC55_0877 c3fae666cbab29732a6a0cc6072dcedf 220 SUPERFAMILY SSF63848 113 218 4.18E-32 T 17-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 FORC55_0877 c3fae666cbab29732a6a0cc6072dcedf 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.2E-37 T 17-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 FORC55_2554 fbb0eee0e4a3d7eaf2b21c82f6d81133 232 SUPERFAMILY SSF51161 68 199 1.14E-32 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_2554 fbb0eee0e4a3d7eaf2b21c82f6d81133 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 7.5E-9 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_2554 fbb0eee0e4a3d7eaf2b21c82f6d81133 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 FORC55_2554 fbb0eee0e4a3d7eaf2b21c82f6d81133 232 Gene3D G3DSA:2.160.10.10 13 214 4.7E-49 T 17-10-2018 FORC55_0068 496445aa6e0811642d36085f8f56ed58 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.358 T 17-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 FORC55_0068 496445aa6e0811642d36085f8f56ed58 260 SUPERFAMILY SSF53335 28 258 8.83E-52 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0068 496445aa6e0811642d36085f8f56ed58 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 7.8E-84 T 17-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 FORC55_0068 496445aa6e0811642d36085f8f56ed58 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 29 259 3.1E-103 T 17-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 FORC55_0068 496445aa6e0811642d36085f8f56ed58 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 17-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 FORC55_0068 496445aa6e0811642d36085f8f56ed58 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 17-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 FORC55_0068 496445aa6e0811642d36085f8f56ed58 260 Gene3D G3DSA:3.40.50.150 40 260 1.7E-75 T 17-10-2018 FORC55_0390 514c493a03d2ea5044f0bcba96eb71e1 177 Gene3D G3DSA:1.20.144.10 89 177 1.7E-21 T 17-10-2018 FORC55_0390 514c493a03d2ea5044f0bcba96eb71e1 177 Pfam PF01569 PAP2 superfamily 67 175 1.5E-20 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase FORC55_0390 514c493a03d2ea5044f0bcba96eb71e1 177 SUPERFAMILY SSF48317 6 173 3.27E-38 T 17-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily FORC55_0390 514c493a03d2ea5044f0bcba96eb71e1 177 SMART SM00014 64 170 6.0E-12 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase FORC55_1797 9960c3a926156b6f2baba1166262147c 275 Gene3D G3DSA:3.40.50.720 2 262 1.1E-57 T 17-10-2018 FORC55_1797 9960c3a926156b6f2baba1166262147c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.1E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1797 9960c3a926156b6f2baba1166262147c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.1E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1797 9960c3a926156b6f2baba1166262147c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.1E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1797 9960c3a926156b6f2baba1166262147c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.1E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1797 9960c3a926156b6f2baba1166262147c 275 Pfam PF00106 short chain dehydrogenase 3 187 5.3E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1797 9960c3a926156b6f2baba1166262147c 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 FORC55_1797 9960c3a926156b6f2baba1166262147c 275 SUPERFAMILY SSF51735 3 270 7.95E-54 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2237 c4f7517794c3cd2670730cf47ca2ef8a 107 Pfam PF02021 Uncharacterised protein family UPF0102 1 90 4.5E-27 T 17-10-2018 IPR003509 Uncharacterised protein family UPF0102 FORC55_2237 c4f7517794c3cd2670730cf47ca2ef8a 107 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 2 105 2.4E-30 T 17-10-2018 IPR003509 Uncharacterised protein family UPF0102 FORC55_2237 c4f7517794c3cd2670730cf47ca2ef8a 107 SUPERFAMILY SSF52980 2 93 2.15E-16 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_2237 c4f7517794c3cd2670730cf47ca2ef8a 107 Gene3D G3DSA:3.40.1350.10 1 107 2.4E-31 T 17-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 FORC55_2237 c4f7517794c3cd2670730cf47ca2ef8a 107 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 103 17.664 T 17-10-2018 IPR003509 Uncharacterised protein family UPF0102 FORC55_1167 d87834b766137925166088a80bac563d 570 Pfam PF02254 TrkA-N domain 405 516 5.0E-18 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 FORC55_1167 d87834b766137925166088a80bac563d 570 Gene3D G3DSA:3.40.50.720 403 562 5.2E-30 T 17-10-2018 FORC55_1167 d87834b766137925166088a80bac563d 570 Pfam PF00999 Sodium/hydrogen exchanger family 8 371 6.5E-58 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 FORC55_1167 d87834b766137925166088a80bac563d 570 Gene3D G3DSA:1.20.1530.20 1 380 2.8E-71 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily FORC55_1167 d87834b766137925166088a80bac563d 570 SUPERFAMILY SSF51735 403 537 2.42E-23 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 SUPERFAMILY SSF46785 1 85 8.62E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 SUPERFAMILY SSF53850 94 289 3.62E-22 T 17-10-2018 FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.3E-22 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 Gene3D G3DSA:3.40.190.290 95 289 2.4E-13 T 17-10-2018 FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 Pfam PF03466 LysR substrate binding domain 94 287 1.4E-18 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_1251 9de840d9b81e52c764d0e399270eee13 290 Gene3D G3DSA:1.10.10.10 1 87 1.7E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0299 72999f063f8685aa14f3587c96a7027c 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 17-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0299 72999f063f8685aa14f3587c96a7027c 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.983 T 17-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0299 72999f063f8685aa14f3587c96a7027c 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.1E-40 T 17-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0299 72999f063f8685aa14f3587c96a7027c 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.4E-23 T 17-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0299 72999f063f8685aa14f3587c96a7027c 105 SUPERFAMILY SSF50104 4 102 1.02E-33 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily FORC55_0299 72999f063f8685aa14f3587c96a7027c 105 Gene3D G3DSA:2.30.30.30 2 104 3.8E-39 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 FORC55_0299 72999f063f8685aa14f3587c96a7027c 105 SMART SM00739 4 31 5.3E-4 T 17-10-2018 IPR005824 KOW FORC55_0299 72999f063f8685aa14f3587c96a7027c 105 Pfam PF00467 KOW motif 9 37 7.5E-6 T 17-10-2018 IPR005824 KOW FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 Pfam PF03466 LysR substrate binding domain 79 279 1.8E-36 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 Gene3D G3DSA:3.40.190.10 151 249 1.7E-59 T 17-10-2018 FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 SUPERFAMILY SSF46785 1 73 1.45E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 2.5E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 11 22 2.5E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 32 2.5E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 Gene3D G3DSA:3.40.190.10 91 276 1.7E-59 T 17-10-2018 FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 55 1.9E-19 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 Gene3D G3DSA:1.10.10.10 1 83 3.2E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1874 fa3f2977ef1c9eb8a134cda388371940 294 SUPERFAMILY SSF53850 80 285 8.14E-38 T 17-10-2018 FORC55_1450 564b747004db03d72ecb6f75fa05e757 339 Gene3D G3DSA:3.90.850.10 1 338 2.6E-143 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 FORC55_1450 564b747004db03d72ecb6f75fa05e757 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 80 332 1.6E-44 T 17-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 FORC55_1450 564b747004db03d72ecb6f75fa05e757 339 SUPERFAMILY SSF56529 76 334 1.96E-56 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.2E-70 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 Gene3D G3DSA:3.40.190.10 31 310 6.4E-108 T 17-10-2018 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 7.3E-38 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 SUPERFAMILY SSF53850 26 330 1.54E-86 T 17-10-2018 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 Gene3D G3DSA:3.40.190.10 131 315 6.4E-108 T 17-10-2018 FORC55_1381 3a39f36227f368b4d440c1bb9022580a 343 PIRSF PIRSF019574 1 343 2.3E-109 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_2759 71dd66eed8d5dcfd8cff2eeadbf933fc 269 SUPERFAMILY SSF55781 26 165 4.37E-9 T 17-10-2018 FORC55_2759 71dd66eed8d5dcfd8cff2eeadbf933fc 269 Gene3D G3DSA:3.30.70.270 168 269 2.3E-24 T 17-10-2018 FORC55_2759 71dd66eed8d5dcfd8cff2eeadbf933fc 269 SMART SM00267 169 269 3.6E-4 T 17-10-2018 IPR000160 GGDEF domain FORC55_2759 71dd66eed8d5dcfd8cff2eeadbf933fc 269 SUPERFAMILY SSF55073 185 267 5.65E-21 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2759 71dd66eed8d5dcfd8cff2eeadbf933fc 269 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 266 5.2E-19 T 17-10-2018 IPR000160 GGDEF domain FORC55_2759 71dd66eed8d5dcfd8cff2eeadbf933fc 269 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 268 5.5E-22 T 17-10-2018 IPR000160 GGDEF domain FORC55_2951 8ca172e58fadb46dd12d8799f5af6d8f 90 Gene3D G3DSA:2.40.360.20 6 88 8.6E-6 T 17-10-2018 FORC55_1795 4a3fd03b8b1bebfb38ae1e0cc4cb2594 182 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 170 6.5E-35 T 17-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 FORC55_1795 4a3fd03b8b1bebfb38ae1e0cc4cb2594 182 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 164 2.3E-25 T 17-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 FORC55_1795 4a3fd03b8b1bebfb38ae1e0cc4cb2594 182 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 17-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site FORC55_1795 4a3fd03b8b1bebfb38ae1e0cc4cb2594 182 Gene3D G3DSA:3.60.21.10 1 180 7.3E-66 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_1795 4a3fd03b8b1bebfb38ae1e0cc4cb2594 182 SUPERFAMILY SSF56300 1 165 6.51E-38 T 17-10-2018 FORC55_1493 9566b2ff43e0c106c3cdb988f57e930e 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 413 1.0E-16 T 17-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 FORC55_1900 f0cc8960be10db1033feae50e8ffa015 162 Gene3D G3DSA:3.40.140.10 1 156 1.6E-61 T 17-10-2018 FORC55_1900 f0cc8960be10db1033feae50e8ffa015 162 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 17-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 FORC55_1900 f0cc8960be10db1033feae50e8ffa015 162 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 44.951 T 17-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 FORC55_1900 f0cc8960be10db1033feae50e8ffa015 162 Pfam PF14437 MafB19-like deaminase 1 142 3.0E-31 T 17-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 FORC55_1900 f0cc8960be10db1033feae50e8ffa015 162 SUPERFAMILY SSF53927 1 146 4.35E-54 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 FORC55_0838 1fb48a00ece11dfcc9f7b90db168202e 306 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 46 246 1.3E-58 T 17-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN FORC55_0838 1fb48a00ece11dfcc9f7b90db168202e 306 SUPERFAMILY SSF159501 23 274 9.94E-75 T 17-10-2018 FORC55_0838 1fb48a00ece11dfcc9f7b90db168202e 306 PIRSF PIRSF020419 1 290 3.4E-119 T 17-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted FORC55_0838 1fb48a00ece11dfcc9f7b90db168202e 306 Gene3D G3DSA:3.40.50.11550 33 259 2.9E-27 T 17-10-2018 FORC55_0838 1fb48a00ece11dfcc9f7b90db168202e 306 Gene3D G3DSA:1.10.8.760 146 210 2.9E-27 T 17-10-2018 FORC55_1141 bdae6f660496dae6867d89bd919a3d2d 276 Pfam PF13460 NAD(P)H-binding 9 177 2.2E-17 T 17-10-2018 IPR016040 NAD(P)-binding domain FORC55_1141 bdae6f660496dae6867d89bd919a3d2d 276 Gene3D G3DSA:3.40.50.720 1 275 3.9E-48 T 17-10-2018 FORC55_1141 bdae6f660496dae6867d89bd919a3d2d 276 SUPERFAMILY SSF51735 2 265 7.19E-29 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0166 d537417fa398aa263e9378796aee67db 265 Gene3D G3DSA:3.40.50.2020 121 264 1.8E-16 T 17-10-2018 FORC55_0166 d537417fa398aa263e9378796aee67db 265 Pfam PF00156 Phosphoribosyl transferase domain 168 259 3.3E-9 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 FORC55_0166 d537417fa398aa263e9378796aee67db 265 SUPERFAMILY SSF53271 82 260 1.06E-38 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like FORC55_3302 5d9bf1b88521889530b8296ab3454d69 306 PRINTS PR00990 Ribokinase signature 22 41 4.9E-7 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 FORC55_3302 5d9bf1b88521889530b8296ab3454d69 306 PRINTS PR00990 Ribokinase signature 214 225 4.9E-7 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 FORC55_3302 5d9bf1b88521889530b8296ab3454d69 306 PRINTS PR00990 Ribokinase signature 175 190 4.9E-7 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 FORC55_3302 5d9bf1b88521889530b8296ab3454d69 306 SUPERFAMILY SSF53613 1 305 6.86E-83 T 17-10-2018 IPR029056 Ribokinase-like FORC55_3302 5d9bf1b88521889530b8296ab3454d69 306 Gene3D G3DSA:3.40.1190.20 1 306 2.0E-100 T 17-10-2018 IPR029056 Ribokinase-like FORC55_3302 5d9bf1b88521889530b8296ab3454d69 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 FORC55_3302 5d9bf1b88521889530b8296ab3454d69 306 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 FORC55_3302 5d9bf1b88521889530b8296ab3454d69 306 Pfam PF00294 pfkB family carbohydrate kinase 1 297 1.8E-70 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.64 T 17-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 2.2E-90 T 17-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 SUPERFAMILY SSF52540 6 204 1.02E-49 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 178 191 4.4E-37 T 17-10-2018 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 41 52 4.4E-37 T 17-10-2018 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 156 167 4.4E-37 T 17-10-2018 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 142 152 4.4E-37 T 17-10-2018 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 7 24 4.4E-37 T 17-10-2018 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 86 101 4.4E-37 T 17-10-2018 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 7.0E-42 T 17-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 FORC55_1743 4051de9a9544d08f881a0171bb45eca4 213 Gene3D G3DSA:3.40.50.300 3 213 2.1E-61 T 17-10-2018 FORC55_2247 852bffccaffefa4b6d8e5ab6ef2649c7 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 54.591 T 17-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 FORC55_2247 852bffccaffefa4b6d8e5ab6ef2649c7 367 SUPERFAMILY SSF52540 62 201 9.02E-13 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2247 852bffccaffefa4b6d8e5ab6ef2649c7 367 Gene3D G3DSA:3.40.50.300 5 189 8.2E-20 T 17-10-2018 FORC55_2247 852bffccaffefa4b6d8e5ab6ef2649c7 367 Pfam PF03969 AFG1-like ATPase 1 364 1.6E-175 T 17-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 FORC55_1153 bb435a6eba44e197ade9fe3b25094a5e 262 Gene3D G3DSA:3.40.50.300 1 261 1.6E-69 T 17-10-2018 FORC55_1153 bb435a6eba44e197ade9fe3b25094a5e 262 Pfam PF00005 ABC transporter 30 178 2.0E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1153 bb435a6eba44e197ade9fe3b25094a5e 262 SMART SM00382 38 227 2.3E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1153 bb435a6eba44e197ade9fe3b25094a5e 262 SUPERFAMILY SSF52540 4 252 8.57E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2831 22517fdb5194190da183b644d35135c5 443 Gene3D G3DSA:3.40.50.80 318 443 2.6E-16 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2831 22517fdb5194190da183b644d35135c5 443 Pfam PF08022 FAD-binding domain 237 314 5.4E-8 T 17-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 FORC55_2831 22517fdb5194190da183b644d35135c5 443 Pfam PF01794 Ferric reductase like transmembrane component 43 179 2.2E-21 T 17-10-2018 IPR013130 Ferric reductase transmembrane component-like domain FORC55_2831 22517fdb5194190da183b644d35135c5 443 SUPERFAMILY SSF63380 237 316 8.42E-16 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_2831 22517fdb5194190da183b644d35135c5 443 SUPERFAMILY SSF52343 319 440 3.01E-18 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_2831 22517fdb5194190da183b644d35135c5 443 Gene3D G3DSA:2.40.30.10 219 314 1.1E-14 T 17-10-2018 FORC55_2831 22517fdb5194190da183b644d35135c5 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 325 344 6.6E-5 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2831 22517fdb5194190da183b644d35135c5 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 407 415 6.6E-5 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_2831 22517fdb5194190da183b644d35135c5 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 254 266 6.6E-5 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 FORC55_1676 83ef0b86cf4abc3eec8debe19fb61bae 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 197 8.7E-58 T 17-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 FORC55_1676 83ef0b86cf4abc3eec8debe19fb61bae 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 28 185 6.9E-55 T 17-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like FORC55_1676 83ef0b86cf4abc3eec8debe19fb61bae 198 Gene3D G3DSA:2.50.20.10 16 197 8.9E-48 T 17-10-2018 FORC55_1676 83ef0b86cf4abc3eec8debe19fb61bae 198 SUPERFAMILY SSF89392 20 197 2.04E-52 T 17-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX FORC55_1676 83ef0b86cf4abc3eec8debe19fb61bae 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 30.783 T 17-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 FORC55_0040 b3f59235f437d7b689ffeb12e3dd470b 185 Pfam PF01300 Telomere recombination 10 185 1.3E-47 T 17-10-2018 IPR006070 YrdC-like domain GO:0003725 FORC55_0040 b3f59235f437d7b689ffeb12e3dd470b 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 185 2.3E-40 T 17-10-2018 IPR006070 YrdC-like domain GO:0003725 FORC55_0040 b3f59235f437d7b689ffeb12e3dd470b 185 Gene3D G3DSA:3.90.870.10 1 183 1.3E-61 T 17-10-2018 FORC55_0040 b3f59235f437d7b689ffeb12e3dd470b 185 SUPERFAMILY SSF55821 2 178 3.66E-55 T 17-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily FORC55_0040 b3f59235f437d7b689ffeb12e3dd470b 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.001 T 17-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 FORC55_1567 f45725f85b903ae1c315c0afea2b7178 161 Pfam PF00583 Acetyltransferase (GNAT) family 43 137 1.4E-14 T 17-10-2018 IPR000182 GNAT domain FORC55_1567 f45725f85b903ae1c315c0afea2b7178 161 SUPERFAMILY SSF55729 1 160 1.2E-28 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_1567 f45725f85b903ae1c315c0afea2b7178 161 Gene3D G3DSA:3.40.630.30 2 161 6.8E-28 T 17-10-2018 FORC55_0662 1cb3c27b7aac7a30fb4e10b605e34f0b 258 Pfam PF02107 Flagellar L-ring protein 80 255 5.7E-58 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 FORC55_0662 1cb3c27b7aac7a30fb4e10b605e34f0b 258 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 258 28.311 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 FORC55_0662 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 221 235 1.8E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 FORC55_0662 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 237 251 1.8E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 FORC55_0662 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 200 216 1.8E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 FORC55_0662 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 102 114 1.8E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 FORC55_0662 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 174 189 1.8E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 FORC55_3298 fe59d3902ddacfdc931b9ea9d097bc35 145 SUPERFAMILY SSF158675 1 145 3.14E-51 T 17-10-2018 IPR023132 Sama2622-like superfamily FORC55_3298 fe59d3902ddacfdc931b9ea9d097bc35 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 2.2E-51 T 17-10-2018 IPR021422 Protein of unknown function DUF3069 FORC55_3298 fe59d3902ddacfdc931b9ea9d097bc35 145 Gene3D G3DSA:1.10.3440.10 12 144 1.8E-5 T 17-10-2018 IPR023132 Sama2622-like superfamily FORC55_3077 32dbaff9c70441642612c93376a230f1 183 Pfam PF08774 VRR-NUC domain 95 157 1.2E-9 T 17-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 FORC55_3077 32dbaff9c70441642612c93376a230f1 183 SMART SM00990 78 158 5.5E-5 T 17-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 FORC55_3077 32dbaff9c70441642612c93376a230f1 183 Gene3D G3DSA:3.40.1350.10 81 164 2.8E-7 T 17-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 FORC55_0630 6704b9421b96308dbf75dc9bbbb25e30 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.311 T 17-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 FORC55_0630 6704b9421b96308dbf75dc9bbbb25e30 191 Pfam PF13580 SIS domain 14 146 2.0E-31 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_0630 6704b9421b96308dbf75dc9bbbb25e30 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 1.9E-83 T 17-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 FORC55_0630 6704b9421b96308dbf75dc9bbbb25e30 191 Gene3D G3DSA:3.40.50.10490 1 191 1.0E-72 T 17-10-2018 FORC55_0630 6704b9421b96308dbf75dc9bbbb25e30 191 SUPERFAMILY SSF53697 1 188 4.04E-53 T 17-10-2018 FORC55_2005 9524abcc8af02ceead6e45873b8b7d9c 352 Gene3D G3DSA:2.40.10.240 64 163 9.7E-119 T 17-10-2018 FORC55_2005 9524abcc8af02ceead6e45873b8b7d9c 352 Gene3D G3DSA:3.40.1780.10 14 345 9.7E-119 T 17-10-2018 FORC55_2005 9524abcc8af02ceead6e45873b8b7d9c 352 Pfam PF02547 Queuosine biosynthesis protein 3 345 2.3E-134 T 17-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 FORC55_2005 9524abcc8af02ceead6e45873b8b7d9c 352 SUPERFAMILY SSF111337 1 345 1.7E-140 T 17-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 FORC55_2005 9524abcc8af02ceead6e45873b8b7d9c 352 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.739 T 17-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 FORC55_2005 9524abcc8af02ceead6e45873b8b7d9c 352 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 3.7E-160 T 17-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 FORC55_0018 ce9269d8c490e1bcd77a98e64cc9e3a3 94 Pfam PF13710 ACT domain 12 73 1.1E-20 T 17-10-2018 FORC55_0018 ce9269d8c490e1bcd77a98e64cc9e3a3 94 Gene3D G3DSA:3.30.70.260 1 89 4.5E-11 T 17-10-2018 FORC55_0018 ce9269d8c490e1bcd77a98e64cc9e3a3 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 70 0.001 T 17-10-2018 FORC55_0018 ce9269d8c490e1bcd77a98e64cc9e3a3 94 SUPERFAMILY SSF55021 3 75 1.65E-9 T 17-10-2018 FORC55_2213 a83467d77f75013e84f289ebab867916 337 Gene3D G3DSA:3.40.190.10 120 328 9.7E-123 T 17-10-2018 FORC55_2213 a83467d77f75013e84f289ebab867916 337 Gene3D G3DSA:3.40.190.10 25 297 9.7E-123 T 17-10-2018 FORC55_2213 a83467d77f75013e84f289ebab867916 337 SUPERFAMILY SSF53850 23 334 6.14E-75 T 17-10-2018 FORC55_2213 a83467d77f75013e84f289ebab867916 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 297 1.9E-18 T 17-10-2018 FORC55_2213 a83467d77f75013e84f289ebab867916 337 PIRSF PIRSF002825 4 337 1.7E-97 T 17-10-2018 IPR026045 Ferric binding protein FORC55_0387 9e00dd9cbf7a8d4837950ab97cfb46ab 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 1.9E-137 T 17-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 FORC55_0387 9e00dd9cbf7a8d4837950ab97cfb46ab 363 SMART SM01329 7 356 1.1E-203 T 17-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 FORC55_0387 9e00dd9cbf7a8d4837950ab97cfb46ab 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.441 T 17-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 FORC55_0387 9e00dd9cbf7a8d4837950ab97cfb46ab 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 17-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 FORC55_0387 9e00dd9cbf7a8d4837950ab97cfb46ab 363 SUPERFAMILY SSF53659 4 360 3.96E-123 T 17-10-2018 FORC55_0387 9e00dd9cbf7a8d4837950ab97cfb46ab 363 Gene3D G3DSA:3.40.718.10 1 363 5.6E-156 T 17-10-2018 FORC55_0387 9e00dd9cbf7a8d4837950ab97cfb46ab 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 6.6E-165 T 17-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 FORC55_2199 5bf0fb41ab079ae36ada42ab96b22fdf 340 Pfam PF05175 Methyltransferase small domain 171 336 3.1E-59 T 17-10-2018 IPR007848 Methyltransferase small domain GO:0008168 FORC55_2199 5bf0fb41ab079ae36ada42ab96b22fdf 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.372 T 17-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 FORC55_2199 5bf0fb41ab079ae36ada42ab96b22fdf 340 SUPERFAMILY SSF53335 157 337 7.55E-28 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2199 5bf0fb41ab079ae36ada42ab96b22fdf 340 Gene3D G3DSA:3.40.50.150 1 158 1.6E-50 T 17-10-2018 FORC55_2199 5bf0fb41ab079ae36ada42ab96b22fdf 340 Gene3D G3DSA:3.40.50.150 159 340 2.3E-42 T 17-10-2018 FORC55_2199 5bf0fb41ab079ae36ada42ab96b22fdf 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_2199 5bf0fb41ab079ae36ada42ab96b22fdf 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 8.1E-56 T 17-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 FORC55_1287 e440263a83e73ac93e3c51068b1b8693 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 1.3E-120 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_1287 e440263a83e73ac93e3c51068b1b8693 457 PIRSF PIRSF006603 5 452 3.8E-63 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_1287 e440263a83e73ac93e3c51068b1b8693 457 Pfam PF01554 MatE 17 176 1.5E-38 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_1287 e440263a83e73ac93e3c51068b1b8693 457 Pfam PF01554 MatE 243 404 2.2E-36 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_1278 d91b38eb7c33e77d6685f709a3d6a3ab 434 SUPERFAMILY SSF53850 26 421 4.29E-69 T 17-10-2018 FORC55_1278 d91b38eb7c33e77d6685f709a3d6a3ab 434 Gene3D G3DSA:3.40.190.10 30 380 1.4E-115 T 17-10-2018 FORC55_1278 d91b38eb7c33e77d6685f709a3d6a3ab 434 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 2.3E-37 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_1278 d91b38eb7c33e77d6685f709a3d6a3ab 434 Gene3D G3DSA:3.40.190.10 146 419 1.4E-115 T 17-10-2018 FORC55_0947 492dc966944e4085e1c75ad669de2529 673 SUPERFAMILY SSF69318 182 647 2.09E-10 T 17-10-2018 FORC55_0947 492dc966944e4085e1c75ad669de2529 673 SUPERFAMILY SSF69318 40 277 3.27E-21 T 17-10-2018 FORC55_0947 492dc966944e4085e1c75ad669de2529 673 ProSitePatterns PS00018 EF-hand calcium-binding domain. 45 57 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site FORC55_0947 492dc966944e4085e1c75ad669de2529 673 Pfam PF16458 Beta-prism lectin 299 432 1.1E-35 T 17-10-2018 IPR032496 Hemolysin, beta-prism lectin FORC55_0947 492dc966944e4085e1c75ad669de2529 673 Gene3D G3DSA:2.100.10.30 296 409 2.5E-23 T 17-10-2018 IPR036404 Jacalin-like lectin domain superfamily FORC55_3025 bd0bba715c2c3cb4d44f5466a9b29894 76 Pfam PF09016 Pas factor saposin fold 1 76 7.1E-37 T 17-10-2018 IPR015106 Pas factor saposin domain FORC55_3025 bd0bba715c2c3cb4d44f5466a9b29894 76 Gene3D G3DSA:1.20.1280.100 1 73 2.0E-33 T 17-10-2018 FORC55_3046 bd0bba715c2c3cb4d44f5466a9b29894 76 Pfam PF09016 Pas factor saposin fold 1 76 7.1E-37 T 17-10-2018 IPR015106 Pas factor saposin domain FORC55_3046 bd0bba715c2c3cb4d44f5466a9b29894 76 Gene3D G3DSA:1.20.1280.100 1 73 2.0E-33 T 17-10-2018 FORC55_2995 bd0bba715c2c3cb4d44f5466a9b29894 76 Pfam PF09016 Pas factor saposin fold 1 76 7.1E-37 T 17-10-2018 IPR015106 Pas factor saposin domain FORC55_2995 bd0bba715c2c3cb4d44f5466a9b29894 76 Gene3D G3DSA:1.20.1280.100 1 73 2.0E-33 T 17-10-2018 FORC55_3214 01ab148df9ba02bae66b68ecf93a3932 150 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 136 7.1E-36 T 17-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 FORC55_3214 01ab148df9ba02bae66b68ecf93a3932 150 SUPERFAMILY SSF54637 1 139 9.53E-29 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_3214 01ab148df9ba02bae66b68ecf93a3932 150 Pfam PF03061 Thioesterase superfamily 52 128 6.5E-16 T 17-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 FORC55_3214 01ab148df9ba02bae66b68ecf93a3932 150 Gene3D G3DSA:3.10.129.10 1 144 5.5E-54 T 17-10-2018 FORC55_2348 d7f12b66d24d555e410552447cad64d9 165 SUPERFAMILY SSF53597 1 160 2.62E-57 T 17-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 FORC55_2348 d7f12b66d24d555e410552447cad64d9 165 PRINTS PR00070 Dihydrofolate reductase signature 41 52 9.2E-14 T 17-10-2018 FORC55_2348 d7f12b66d24d555e410552447cad64d9 165 PRINTS PR00070 Dihydrofolate reductase signature 92 106 9.2E-14 T 17-10-2018 FORC55_2348 d7f12b66d24d555e410552447cad64d9 165 PRINTS PR00070 Dihydrofolate reductase signature 28 36 9.2E-14 T 17-10-2018 FORC55_2348 d7f12b66d24d555e410552447cad64d9 165 PRINTS PR00070 Dihydrofolate reductase signature 14 24 9.2E-14 T 17-10-2018 FORC55_2348 d7f12b66d24d555e410552447cad64d9 165 Pfam PF00186 Dihydrofolate reductase 2 159 2.5E-61 T 17-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 FORC55_2348 d7f12b66d24d555e410552447cad64d9 165 Gene3D G3DSA:3.40.430.10 1 163 4.3E-59 T 17-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 FORC55_2348 d7f12b66d24d555e410552447cad64d9 165 PIRSF PIRSF000194 1 162 2.5E-62 T 17-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 FORC55_3495 717f0c26c4f6783b77435257a0a8a149 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 1.0E-158 T 17-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 FORC55_3495 717f0c26c4f6783b77435257a0a8a149 377 PIRSF PIRSF006078 1 377 1.7E-136 T 17-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 FORC55_3495 717f0c26c4f6783b77435257a0a8a149 377 Pfam PF02595 Glycerate kinase family 3 373 1.9E-148 T 17-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 FORC55_3495 717f0c26c4f6783b77435257a0a8a149 377 Gene3D G3DSA:3.40.50.10350 1 362 8.4E-141 T 17-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold FORC55_3495 717f0c26c4f6783b77435257a0a8a149 377 SUPERFAMILY SSF110738 1 375 1.44E-141 T 17-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 FORC55_3495 717f0c26c4f6783b77435257a0a8a149 377 Gene3D G3DSA:3.90.1510.10 42 276 8.4E-141 T 17-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 FORC55_1398 deba2a9cbacc6d50d96c95b7b9d35ae0 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 498 1.2E-130 T 17-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 FORC55_1398 deba2a9cbacc6d50d96c95b7b9d35ae0 511 Gene3D G3DSA:1.20.1250.20 275 508 1.2E-13 T 17-10-2018 FORC55_1398 deba2a9cbacc6d50d96c95b7b9d35ae0 511 SUPERFAMILY SSF103473 8 503 4.05E-59 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_1398 deba2a9cbacc6d50d96c95b7b9d35ae0 511 Gene3D G3DSA:1.20.1720.10 21 225 1.4E-40 T 17-10-2018 FORC55_1398 deba2a9cbacc6d50d96c95b7b9d35ae0 511 Pfam PF07690 Major Facilitator Superfamily 24 417 1.3E-51 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 SUPERFAMILY SSF53633 13 262 1.96E-67 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 374 4.7E-149 T 17-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 Pfam PF01472 PUA domain 284 358 6.3E-25 T 17-10-2018 IPR002478 PUA domain GO:0003723 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 17-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 Gene3D G3DSA:3.40.1160.10 2 272 2.0E-89 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 PIRSF PIRSF000729 7 376 1.2E-138 T 17-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 SUPERFAMILY SSF88697 284 374 4.14E-25 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 Gene3D G3DSA:2.30.130.10 273 375 7.4E-35 T 17-10-2018 IPR036974 PUA domain superfamily GO:0003723 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 5.0E-55 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 5.0E-55 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 5.0E-55 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 5.0E-55 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 5.0E-55 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 268 36.374 T 17-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 Pfam PF00696 Amino acid kinase family 13 241 9.1E-44 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_0588 00247cd85597fc9aa0c9036d1aa8e909 377 SMART SM00359 284 367 1.3E-19 T 17-10-2018 IPR002478 PUA domain GO:0003723 FORC55_0726 0ff37f14d568d3689c7ec977cf2cb56c 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 17-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 FORC55_0726 0ff37f14d568d3689c7ec977cf2cb56c 136 Gene3D G3DSA:2.30.330.10 45 136 1.2E-33 T 17-10-2018 IPR036429 SpoA-like superfamily FORC55_0726 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.1E-27 T 17-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 FORC55_0726 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.1E-27 T 17-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 FORC55_0726 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.1E-27 T 17-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 FORC55_0726 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.1E-27 T 17-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 FORC55_0726 0ff37f14d568d3689c7ec977cf2cb56c 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 17-10-2018 IPR001543 Surface presentation of antigen (SpoA) FORC55_0726 0ff37f14d568d3689c7ec977cf2cb56c 136 SUPERFAMILY SSF101801 54 134 6.02E-25 T 17-10-2018 IPR036429 SpoA-like superfamily FORC55_3657 85ba35da88c906ba6162fdfd52d4ffe5 220 Gene3D G3DSA:3.10.620.30 22 211 1.8E-76 T 17-10-2018 FORC55_3657 85ba35da88c906ba6162fdfd52d4ffe5 220 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 54 163 2.7E-15 T 17-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted FORC55_0186 a35cdb6d0273dfba0474aac8a1c5f148 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.9E-35 T 17-10-2018 IPR019886 Sodium symporter small subunit, predicted FORC55_0186 a35cdb6d0273dfba0474aac8a1c5f148 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 1.3E-34 T 17-10-2018 IPR019886 Sodium symporter small subunit, predicted FORC55_0175 ce8721709bbbf18b4c0becd1459bc15f 535 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 16 344 1.3E-85 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 FORC55_0175 ce8721709bbbf18b4c0becd1459bc15f 535 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 254 271 - T 17-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 FORC55_0175 ce8721709bbbf18b4c0becd1459bc15f 535 SUPERFAMILY SSF51445 5 370 7.79E-81 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_0175 ce8721709bbbf18b4c0becd1459bc15f 535 Gene3D G3DSA:3.40.50.1700 362 527 3.8E-6 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 FORC55_0175 ce8721709bbbf18b4c0becd1459bc15f 535 Gene3D G3DSA:3.20.20.300 2 354 1.2E-109 T 17-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 FORC55_2949 670be9bba3daf51fc44be54f1e847719 436 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 5.7E-30 T 17-10-2018 IPR017508 HipA, N-terminal subdomain 1 FORC55_2949 670be9bba3daf51fc44be54f1e847719 436 Pfam PF07804 HipA-like C-terminal domain 150 403 8.1E-49 T 17-10-2018 IPR012893 HipA-like, C-terminal FORC55_2949 670be9bba3daf51fc44be54f1e847719 436 Pfam PF13657 HipA N-terminal domain 7 103 2.2E-22 T 17-10-2018 IPR017508 HipA, N-terminal subdomain 1 FORC55_0296 b5c9a463e207be38c908743088107eba 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.6E-25 T 17-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0296 b5c9a463e207be38c908743088107eba 63 SUPERFAMILY SSF46561 1 61 1.7E-23 T 17-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0296 b5c9a463e207be38c908743088107eba 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.7E-24 T 17-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0296 b5c9a463e207be38c908743088107eba 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.159 T 17-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0296 b5c9a463e207be38c908743088107eba 63 Gene3D G3DSA:1.10.287.310 1 63 1.3E-31 T 17-10-2018 FORC55_0296 b5c9a463e207be38c908743088107eba 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 17-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_2752 05c6a91f7d9c032bf07706294a284da8 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 359 8.4E-36 T 17-10-2018 IPR000160 GGDEF domain FORC55_2752 05c6a91f7d9c032bf07706294a284da8 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 358 9.3E-37 T 17-10-2018 IPR000160 GGDEF domain FORC55_2752 05c6a91f7d9c032bf07706294a284da8 366 Gene3D G3DSA:3.30.70.270 206 364 9.8E-41 T 17-10-2018 FORC55_2752 05c6a91f7d9c032bf07706294a284da8 366 SUPERFAMILY SSF55073 216 360 2.98E-35 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2752 05c6a91f7d9c032bf07706294a284da8 366 SMART SM00267 200 365 1.8E-34 T 17-10-2018 IPR000160 GGDEF domain FORC55_3081 555435abdba9d3fe5076842da9477b27 449 Gene3D G3DSA:2.40.10.10 138 292 4.3E-7 T 17-10-2018 FORC55_3081 555435abdba9d3fe5076842da9477b27 449 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 138 152 1.1E-7 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_3081 555435abdba9d3fe5076842da9477b27 449 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 46 61 1.1E-7 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_3081 555435abdba9d3fe5076842da9477b27 449 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 254 266 1.1E-7 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_3081 555435abdba9d3fe5076842da9477b27 449 Pfam PF00089 Trypsin 21 277 9.1E-12 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 FORC55_3081 555435abdba9d3fe5076842da9477b27 449 Gene3D G3DSA:2.40.10.10 20 62 1.9E-6 T 17-10-2018 FORC55_3081 555435abdba9d3fe5076842da9477b27 449 SMART SM00020 19 302 5.4E-5 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 FORC55_3081 555435abdba9d3fe5076842da9477b27 449 SUPERFAMILY SSF50494 6 279 5.91E-19 T 17-10-2018 IPR009003 Peptidase S1, PA clan FORC55_0436 bd94ffe898e47894d73e733ec0397455 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 1.6E-41 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0436 bd94ffe898e47894d73e733ec0397455 418 SMART SM00304 89 141 0.0026 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0436 bd94ffe898e47894d73e733ec0397455 418 SUPERFAMILY SSF58104 109 418 1.22E-74 T 17-10-2018 FORC55_0436 bd94ffe898e47894d73e733ec0397455 418 Gene3D G3DSA:1.10.287.950 89 418 1.4E-68 T 17-10-2018 FORC55_0436 bd94ffe898e47894d73e733ec0397455 418 SMART SM00283 156 417 6.9E-70 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0436 bd94ffe898e47894d73e733ec0397455 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 1.3E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0436 bd94ffe898e47894d73e733ec0397455 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 1.3E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0436 bd94ffe898e47894d73e733ec0397455 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 1.3E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3502 ad8035e3f32b265732ea31975b67f709 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 4.4E-21 T 17-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 FORC55_3467 9b7ef74bcc6c187a3453894fc3d1f462 706 SUPERFAMILY SSF53474 335 608 1.13E-12 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_3467 9b7ef74bcc6c187a3453894fc3d1f462 706 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 692 1.8E-233 T 17-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family FORC55_3467 9b7ef74bcc6c187a3453894fc3d1f462 706 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 179 5.2E-79 T 17-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain FORC55_3467 9b7ef74bcc6c187a3453894fc3d1f462 706 Gene3D G3DSA:3.40.50.1820 329 502 5.8E-24 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_1721 773d6179351bf38d85819a94a341b671 353 SUPERFAMILY SSF52096 103 303 4.04E-29 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_1721 773d6179351bf38d85819a94a341b671 353 Pfam PF01343 Peptidase family S49 165 313 5.5E-48 T 17-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 FORC55_1721 773d6179351bf38d85819a94a341b671 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 6.0E-55 T 17-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 FORC55_1721 773d6179351bf38d85819a94a341b671 353 Gene3D G3DSA:3.90.226.10 109 306 4.6E-44 T 17-10-2018 FORC55_1721 773d6179351bf38d85819a94a341b671 353 Gene3D G3DSA:3.40.1750.20 206 270 4.6E-44 T 17-10-2018 FORC55_3211 3f516a7af1592ec52707aa812b943195 711 Gene3D G3DSA:2.40.170.20 171 711 7.2E-118 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_3211 3f516a7af1592ec52707aa812b943195 711 SUPERFAMILY SSF56935 18 711 4.76E-113 T 17-10-2018 FORC55_3211 3f516a7af1592ec52707aa812b943195 711 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 711 7.6E-139 T 17-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 FORC55_3211 3f516a7af1592ec52707aa812b943195 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 150 2.6E-25 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain FORC55_3211 3f516a7af1592ec52707aa812b943195 711 Pfam PF00593 TonB dependent receptor 252 709 9.0E-61 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel FORC55_3211 3f516a7af1592ec52707aa812b943195 711 Gene3D G3DSA:2.170.130.10 28 156 8.4E-35 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily FORC55_3211 3f516a7af1592ec52707aa812b943195 711 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 711 1.1E-117 T 17-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 3.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 3.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 3.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 3.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 7.1E-25 T 17-10-2018 FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 Gene3D G3DSA:3.40.50.1000 9 191 8.4E-41 T 17-10-2018 IPR023214 HAD superfamily FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 SUPERFAMILY SSF56784 6 218 2.76E-41 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 Gene3D G3DSA:1.10.150.240 21 88 8.4E-41 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 FORC55_3419 ea4cb7d1b4c71303c5ba28c09378f80b 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 185 9.6E-11 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_1851 41af7384d1c046e1d2f6ce004298ff3e 469 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 317 454 1.6E-8 T 17-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain FORC55_1851 41af7384d1c046e1d2f6ce004298ff3e 469 Pfam PF13440 Polysaccharide biosynthesis protein 27 310 6.0E-24 T 17-10-2018 FORC55_1618 27121ec401e17a4cc2ad9a66be33e0ac 289 Gene3D G3DSA:3.20.20.410 2 269 1.3E-45 T 17-10-2018 IPR036520 UPF0759 superfamily FORC55_1618 27121ec401e17a4cc2ad9a66be33e0ac 289 Pfam PF01904 Protein of unknown function DUF72 24 263 3.0E-56 T 17-10-2018 IPR002763 Protein of unknown function DUF72 FORC55_1618 27121ec401e17a4cc2ad9a66be33e0ac 289 SUPERFAMILY SSF117396 6 266 1.14E-74 T 17-10-2018 IPR036520 UPF0759 superfamily FORC55_1655 3f94713f8078f7f97391e93af827ce44 434 SUPERFAMILY SSF53613 31 417 2.34E-44 T 17-10-2018 IPR029056 Ribokinase-like FORC55_1655 3f94713f8078f7f97391e93af827ce44 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 1.3E-10 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 SUPERFAMILY SSF50249 2 125 1.37E-49 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.4E-131 T 17-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:2.30.30.30 115 195 6.8E-32 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 SMART SM01383 42 118 4.0E-47 T 17-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 5.2E-34 T 17-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:4.10.950.10 196 274 1.5E-36 T 17-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 SUPERFAMILY SSF50104 127 272 6.02E-61 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.1E-55 T 17-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 17-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 PIRSF PIRSF002158 13 274 3.2E-102 T 17-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 SMART SM01382 124 252 2.2E-91 T 17-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.088 T 17-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 FORC55_0291 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:2.40.50.140 1 114 3.5E-50 T 17-10-2018 FORC55_0176 d61ad197738ebccb0b7095d62029cecd 728 SMART SM00495 681 724 1.3E-10 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_0176 d61ad197738ebccb0b7095d62029cecd 728 Gene3D G3DSA:2.150.10.10 296 415 1.5E-11 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal FORC55_0176 d61ad197738ebccb0b7095d62029cecd 728 Gene3D G3DSA:2.10.10.20 679 728 5.5E-16 T 17-10-2018 FORC55_0176 d61ad197738ebccb0b7095d62029cecd 728 SUPERFAMILY SSF51055 680 727 1.57E-15 T 17-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_0176 d61ad197738ebccb0b7095d62029cecd 728 SUPERFAMILY SSF51120 173 394 3.79E-11 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal FORC55_1364 51532b15da5080cdd93af52e95913cbf 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 1.6E-228 T 17-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 FORC55_1364 51532b15da5080cdd93af52e95913cbf 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 6.6E-115 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_1364 51532b15da5080cdd93af52e95913cbf 475 SUPERFAMILY SSF81442 9 465 5.1E-122 T 17-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_1364 51532b15da5080cdd93af52e95913cbf 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 17-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_1364 51532b15da5080cdd93af52e95913cbf 475 Gene3D G3DSA:1.20.210.10 4 472 6.4E-205 T 17-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_0531 0b1633d643b60b2439ce649cc04463d5 384 Gene3D G3DSA:1.10.3210.10 172 376 6.4E-45 T 17-10-2018 FORC55_0531 0b1633d643b60b2439ce649cc04463d5 384 Pfam PF13487 HD domain 244 313 7.4E-13 T 17-10-2018 FORC55_0531 0b1633d643b60b2439ce649cc04463d5 384 Gene3D G3DSA:3.30.450.40 15 161 7.2E-7 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_0531 0b1633d643b60b2439ce649cc04463d5 384 SUPERFAMILY SSF55781 32 150 2.78E-8 T 17-10-2018 FORC55_0531 0b1633d643b60b2439ce649cc04463d5 384 SUPERFAMILY SSF109604 169 361 1.0E-22 T 17-10-2018 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 370 392 9.3E-9 T 17-10-2018 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 26 45 9.3E-9 T 17-10-2018 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 25 47 2.8E-7 T 17-10-2018 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 392 2.8E-7 T 17-10-2018 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 SUPERFAMILY SSF56425 253 368 5.53E-42 T 17-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 Gene3D G3DSA:3.50.50.60 25 418 8.8E-155 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 SUPERFAMILY SSF51905 17 462 1.04E-76 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 PIRSF PIRSF000171 350 547 5.7E-11 T 17-10-2018 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 PIRSF PIRSF000171 15 285 4.0E-27 T 17-10-2018 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 Pfam PF02910 Fumarate reductase flavoprotein C-term 456 537 1.1E-14 T 17-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 Pfam PF00890 FAD binding domain 25 407 4.7E-104 T 17-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 Gene3D G3DSA:3.90.700.10 263 373 8.8E-155 T 17-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 Gene3D G3DSA:1.20.58.100 440 550 4.2E-43 T 17-10-2018 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 SUPERFAMILY SSF46977 441 540 3.4E-31 T 17-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0407 56e0dfd080796d9b8b34ea909547cc9e 550 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 22 535 3.0E-213 T 17-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 FORC55_2819 f7f876e7ec3f342bd6fbe73e0e36a185 389 SUPERFAMILY SSF51055 340 386 8.37E-13 T 17-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_2819 f7f876e7ec3f342bd6fbe73e0e36a185 389 SMART SM00495 346 389 1.4E-8 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_2819 f7f876e7ec3f342bd6fbe73e0e36a185 389 Gene3D G3DSA:2.70.50.50 26 219 8.5E-64 T 17-10-2018 FORC55_2819 f7f876e7ec3f342bd6fbe73e0e36a185 389 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 3.0E-39 T 17-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal FORC55_2819 f7f876e7ec3f342bd6fbe73e0e36a185 389 SUPERFAMILY SSF81296 26 218 2.38E-49 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_2819 f7f876e7ec3f342bd6fbe73e0e36a185 389 Pfam PF02839 Carbohydrate binding domain 363 388 6.6E-5 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_2819 f7f876e7ec3f342bd6fbe73e0e36a185 389 Gene3D G3DSA:2.10.10.20 346 389 3.9E-18 T 17-10-2018 FORC55_3633 7c45c9fff4cb96c44eac306a88b021ee 313 Gene3D G3DSA:3.40.50.880 1 193 3.2E-37 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_3633 7c45c9fff4cb96c44eac306a88b021ee 313 Pfam PF12833 Helix-turn-helix domain 228 306 3.1E-20 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3633 7c45c9fff4cb96c44eac306a88b021ee 313 Gene3D G3DSA:1.10.10.60 205 310 4.6E-26 T 17-10-2018 FORC55_3633 7c45c9fff4cb96c44eac306a88b021ee 313 SUPERFAMILY SSF46689 204 255 6.45E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3633 7c45c9fff4cb96c44eac306a88b021ee 313 SUPERFAMILY SSF46689 257 308 2.06E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3633 7c45c9fff4cb96c44eac306a88b021ee 313 Pfam PF01965 DJ-1/PfpI family 58 167 6.5E-10 T 17-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 FORC55_3633 7c45c9fff4cb96c44eac306a88b021ee 313 SUPERFAMILY SSF52317 4 183 1.13E-31 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_3633 7c45c9fff4cb96c44eac306a88b021ee 313 SMART SM00342 221 304 2.0E-20 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_2144 2ca278354e1160ad1ff39fe4be3043bd 799 Gene3D G3DSA:3.40.50.300 425 734 9.7E-56 T 17-10-2018 FORC55_2144 2ca278354e1160ad1ff39fe4be3043bd 799 Gene3D G3DSA:1.10.8.730 489 603 9.7E-56 T 17-10-2018 FORC55_2144 2ca278354e1160ad1ff39fe4be3043bd 799 Pfam PF12846 AAA-like domain 437 692 5.8E-14 T 17-10-2018 FORC55_2144 2ca278354e1160ad1ff39fe4be3043bd 799 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 11 241 7.5E-51 T 17-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase FORC55_2144 2ca278354e1160ad1ff39fe4be3043bd 799 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 15 795 5.7E-212 T 17-10-2018 IPR014117 Type-IV secretion system protein TraC FORC55_2144 2ca278354e1160ad1ff39fe4be3043bd 799 SUPERFAMILY SSF52540 389 722 3.84E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1402 787c79021c32e31088d62b0936c6813b 397 Pfam PF00271 Helicase conserved C-terminal domain 232 337 6.0E-27 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_1402 787c79021c32e31088d62b0936c6813b 397 SMART SM00490 257 338 7.7E-29 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_1402 787c79021c32e31088d62b0936c6813b 397 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_1402 787c79021c32e31088d62b0936c6813b 397 Gene3D G3DSA:3.40.50.300 1 210 1.8E-77 T 17-10-2018 FORC55_1402 787c79021c32e31088d62b0936c6813b 397 Gene3D G3DSA:3.40.50.300 212 374 1.3E-43 T 17-10-2018 FORC55_1402 787c79021c32e31088d62b0936c6813b 397 Pfam PF00270 DEAD/DEAH box helicase 25 195 3.2E-50 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_1402 787c79021c32e31088d62b0936c6813b 397 SUPERFAMILY SSF52540 73 358 5.73E-72 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1402 787c79021c32e31088d62b0936c6813b 397 SMART SM00487 20 221 6.1E-62 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 218 230 9.5E-11 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 61 76 9.5E-11 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 9.5E-11 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 71 76 - T 17-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 524 545 0.0018 T 17-10-2018 IPR020008 GlyGly-CTERM domain FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 Pfam PF00089 Trypsin 33 268 3.3E-50 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 SMART SM00020 32 268 4.4E-62 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 Gene3D G3DSA:2.40.10.10 25 273 1.5E-60 T 17-10-2018 FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 SUPERFAMILY SSF50494 27 270 1.24E-60 T 17-10-2018 IPR009003 Peptidase S1, PA clan FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 219 230 - T 17-10-2018 IPR033116 Serine proteases, trypsin family, serine active site FORC55_1187 0865295c86a28f45ac64ed6405245eb1 548 Gene3D G3DSA:2.60.40.10 274 370 1.0E-7 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1010 3cda179b24b172db9f2d671eb978905c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.5E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1010 3cda179b24b172db9f2d671eb978905c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.5E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1010 3cda179b24b172db9f2d671eb978905c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 2.5E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1010 3cda179b24b172db9f2d671eb978905c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.5E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1010 3cda179b24b172db9f2d671eb978905c 235 Gene3D G3DSA:3.40.50.720 1 235 1.3E-39 T 17-10-2018 FORC55_1010 3cda179b24b172db9f2d671eb978905c 235 SUPERFAMILY SSF51735 2 235 1.62E-44 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1010 3cda179b24b172db9f2d671eb978905c 235 Pfam PF00106 short chain dehydrogenase 3 191 3.6E-16 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1733 0c59874182bb8688a3ef5fd2eb3a1826 182 PIRSF PIRSF000232 1 182 6.7E-62 T 17-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like FORC55_1733 0c59874182bb8688a3ef5fd2eb3a1826 182 Pfam PF00881 Nitroreductase family 8 161 8.6E-26 T 17-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 FORC55_1733 0c59874182bb8688a3ef5fd2eb3a1826 182 Gene3D G3DSA:3.40.109.10 1 182 8.3E-44 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 FORC55_1733 0c59874182bb8688a3ef5fd2eb3a1826 182 SUPERFAMILY SSF55469 1 181 1.01E-41 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 FORC55_2532 3fc33563522096ac423639b0b743e648 266 Pfam PF01973 Protein of unknown function DUF115 36 191 9.5E-10 T 17-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like FORC55_0624 8be218349ea3f7318994ffca3fd9548a 252 Gene3D G3DSA:3.60.15.10 1 252 1.7E-94 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_0624 8be218349ea3f7318994ffca3fd9548a 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.8E-26 T 17-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 FORC55_0624 8be218349ea3f7318994ffca3fd9548a 252 SMART SM00849 12 166 2.1E-34 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_0624 8be218349ea3f7318994ffca3fd9548a 252 SUPERFAMILY SSF56281 2 252 2.75E-71 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_0624 8be218349ea3f7318994ffca3fd9548a 252 Pfam PF00753 Metallo-beta-lactamase superfamily 11 166 8.8E-21 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_0624 8be218349ea3f7318994ffca3fd9548a 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 5.1E-104 T 17-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 FORC55_0624 8be218349ea3f7318994ffca3fd9548a 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.104 T 17-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 FORC55_0624 8be218349ea3f7318994ffca3fd9548a 252 PIRSF PIRSF005457 1 252 4.7E-96 T 17-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 FORC55_0586 cb8e028bd7dcea85c7e265941bc0e5a2 415 SUPERFAMILY SSF53474 47 411 8.11E-47 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0586 cb8e028bd7dcea85c7e265941bc0e5a2 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 56.259 T 17-10-2018 IPR010520 UPF0255 family FORC55_0586 cb8e028bd7dcea85c7e265941bc0e5a2 415 Gene3D G3DSA:3.40.50.1820 18 415 1.0E-115 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0586 cb8e028bd7dcea85c7e265941bc0e5a2 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 1.1E-234 T 17-10-2018 IPR010520 UPF0255 family FORC55_0985 68b626582122fdc733bb607279f024c6 120 Gene3D G3DSA:3.10.450.50 1 120 2.4E-42 T 17-10-2018 FORC55_0985 68b626582122fdc733bb607279f024c6 120 SUPERFAMILY SSF103642 100 120 1.23E-7 T 17-10-2018 FORC55_0985 68b626582122fdc733bb607279f024c6 120 Pfam PF02810 SEC-C motif 103 120 4.3E-9 T 17-10-2018 IPR004027 SEC-C motif FORC55_0985 68b626582122fdc733bb607279f024c6 120 SUPERFAMILY SSF54427 1 95 1.84E-26 T 17-10-2018 IPR032710 NTF2-like domain superfamily FORC55_2556 eb23b7ee24a9388ad3f91d7ba290aa11 232 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 229 1.4E-66 T 17-10-2018 FORC55_2556 eb23b7ee24a9388ad3f91d7ba290aa11 232 Gene3D G3DSA:1.10.510.10 139 230 3.8E-15 T 17-10-2018 FORC55_2556 eb23b7ee24a9388ad3f91d7ba290aa11 232 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 232 42.459 T 17-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 FORC55_2556 eb23b7ee24a9388ad3f91d7ba290aa11 232 SUPERFAMILY SSF56112 37 195 2.56E-18 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily FORC55_3267 f0353660d3a19317ad8c301e746d89f8 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 17-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 FORC55_3267 f0353660d3a19317ad8c301e746d89f8 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 9.7E-102 T 17-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 FORC55_3267 f0353660d3a19317ad8c301e746d89f8 316 Hamap MF_00492 Transaldolase [tal]. 2 316 51.304 T 17-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 FORC55_3267 f0353660d3a19317ad8c301e746d89f8 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 17-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 FORC55_3267 f0353660d3a19317ad8c301e746d89f8 316 Gene3D G3DSA:3.20.20.70 2 316 9.3E-139 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_3267 f0353660d3a19317ad8c301e746d89f8 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 1.2E-154 T 17-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 FORC55_3267 f0353660d3a19317ad8c301e746d89f8 316 SUPERFAMILY SSF51569 1 315 5.23E-115 T 17-10-2018 FORC55_1671 600c2888ae38517df42348adfe3521dc 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 377 3.1E-144 T 17-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 FORC55_1671 600c2888ae38517df42348adfe3521dc 384 Gene3D G3DSA:3.90.1150.10 43 372 8.6E-123 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1671 600c2888ae38517df42348adfe3521dc 384 SUPERFAMILY SSF53383 5 379 1.71E-96 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1671 600c2888ae38517df42348adfe3521dc 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 380 47.495 T 17-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 FORC55_1671 600c2888ae38517df42348adfe3521dc 384 Gene3D G3DSA:3.40.640.10 59 283 8.6E-123 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1671 600c2888ae38517df42348adfe3521dc 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 17-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 FORC55_1671 600c2888ae38517df42348adfe3521dc 384 Pfam PF00155 Aminotransferase class I and II 43 375 1.2E-55 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_1664 11468f0bbb0d99fcc544434d3c861465 425 Gene3D G3DSA:3.50.50.60 1 312 2.5E-24 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1664 11468f0bbb0d99fcc544434d3c861465 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 302 7.6E-20 T 17-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 FORC55_1664 11468f0bbb0d99fcc544434d3c861465 425 SUPERFAMILY SSF51905 1 412 9.06E-53 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_1033 5bc58e3399523905e7b281c71a28523c 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 6.2E-42 T 17-10-2018 IPR019633 Protein of unknown function DUF2498 FORC55_1033 5bc58e3399523905e7b281c71a28523c 82 Gene3D G3DSA:1.10.1900.30 9 76 6.7E-34 T 17-10-2018 IPR038191 YciN superfamily FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 Gene3D G3DSA:3.40.50.720 4 317 4.3E-130 T 17-10-2018 FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 17-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 SUPERFAMILY SSF52283 1 136 3.19E-40 T 17-10-2018 FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 17-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 7.6E-34 T 17-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 SUPERFAMILY SSF51735 103 299 4.18E-54 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 5.6E-51 T 17-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 Gene3D G3DSA:3.40.50.720 103 298 4.3E-130 T 17-10-2018 FORC55_2871 6f42d8cd66042f6675ca5a55f108efc9 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 17-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 Gene3D G3DSA:1.10.530.10 105 346 3.9E-78 T 17-10-2018 FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 SUPERFAMILY SSF53955 87 350 6.75E-55 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 SUPERFAMILY SSF51055 431 481 6.67E-17 T 17-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 Pfam PF00182 Chitinase class I 106 325 1.6E-31 T 17-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 Pfam PF02839 Carbohydrate binding domain 455 477 7.1E-5 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 Gene3D G3DSA:2.10.10.20 438 480 1.0E-16 T 17-10-2018 FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 Gene3D G3DSA:3.30.20.10 178 248 3.9E-78 T 17-10-2018 FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 SMART SM00495 438 480 6.0E-18 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1974 5d6468df3a9628e05baa440b287edf9c 567 SMART SM00495 520 565 0.0022 T 17-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 FORC55_1501 cf902833171c4c56c8eabbe85a5f39ff 233 SUPERFAMILY SSF53098 37 221 8.73E-39 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1501 cf902833171c4c56c8eabbe85a5f39ff 233 Gene3D G3DSA:3.30.420.10 39 221 3.0E-37 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_1501 cf902833171c4c56c8eabbe85a5f39ff 233 Pfam PF00929 Exonuclease 45 214 5.9E-14 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_1501 cf902833171c4c56c8eabbe85a5f39ff 233 SMART SM00479 43 223 7.6E-21 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_3590 d0e35a302bd357cafa308f7acc1e9ca7 285 SUPERFAMILY SSF103481 34 132 1.57E-8 T 17-10-2018 FORC55_3590 d0e35a302bd357cafa308f7acc1e9ca7 285 Pfam PF00892 EamA-like transporter family 1 131 1.8E-7 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3590 d0e35a302bd357cafa308f7acc1e9ca7 285 Pfam PF00892 EamA-like transporter family 143 271 1.6E-12 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3590 d0e35a302bd357cafa308f7acc1e9ca7 285 SUPERFAMILY SSF103481 176 275 3.27E-9 T 17-10-2018 FORC55_2850 8297a0562c7d152eeaab87060f4e6e37 318 Gene3D G3DSA:3.40.50.410 82 284 1.8E-59 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_2850 8297a0562c7d152eeaab87060f4e6e37 318 SMART SM00327 83 256 1.7E-19 T 17-10-2018 IPR002035 von Willebrand factor, type A FORC55_2850 8297a0562c7d152eeaab87060f4e6e37 318 SUPERFAMILY SSF53300 82 280 1.63E-37 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_2850 8297a0562c7d152eeaab87060f4e6e37 318 Pfam PF00092 von Willebrand factor type A domain 85 277 1.5E-36 T 17-10-2018 IPR002035 von Willebrand factor, type A FORC55_1514 fa37f272fdbac848877240b3a8a1a3e9 159 Gene3D G3DSA:1.10.10.10 1 146 1.9E-30 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1514 fa37f272fdbac848877240b3a8a1a3e9 159 Pfam PF01047 MarR family 31 90 1.5E-14 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_1514 fa37f272fdbac848877240b3a8a1a3e9 159 SUPERFAMILY SSF46785 5 142 6.34E-32 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1514 fa37f272fdbac848877240b3a8a1a3e9 159 SMART SM00347 24 125 1.5E-23 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_1514 fa37f272fdbac848877240b3a8a1a3e9 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.3E-6 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_1514 fa37f272fdbac848877240b3a8a1a3e9 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.3E-6 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_1748 573b6f3ecc30e4606b8fb4566e40e859 253 Pfam PF01048 Phosphorylase superfamily 20 251 2.6E-38 T 17-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 FORC55_1748 573b6f3ecc30e4606b8fb4566e40e859 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 17-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_1748 573b6f3ecc30e4606b8fb4566e40e859 253 Gene3D G3DSA:3.40.50.1580 1 253 1.0E-80 T 17-10-2018 FORC55_1748 573b6f3ecc30e4606b8fb4566e40e859 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 1.5E-110 T 17-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 FORC55_1748 573b6f3ecc30e4606b8fb4566e40e859 253 SUPERFAMILY SSF53167 6 249 8.38E-72 T 17-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 FORC55_2909 2a33d8a7d5c28f3a7ede8b4ffb6dfb82 106 PIRSF PIRSF028291 1 105 3.1E-46 T 17-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 FORC55_2909 2a33d8a7d5c28f3a7ede8b4ffb6dfb82 106 Gene3D G3DSA:3.30.310.50 8 103 1.8E-21 T 17-10-2018 FORC55_2909 2a33d8a7d5c28f3a7ede8b4ffb6dfb82 106 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 12 101 3.0E-23 T 17-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 FORC55_1750 bf9eba44a0ca67eedca327fd42ca65f1 138 SMART SM00116 80 127 7.8E-7 T 17-10-2018 IPR000644 CBS domain FORC55_1750 bf9eba44a0ca67eedca327fd42ca65f1 138 SMART SM00116 13 61 0.0071 T 17-10-2018 IPR000644 CBS domain FORC55_1750 bf9eba44a0ca67eedca327fd42ca65f1 138 Pfam PF00571 CBS domain 6 61 7.8E-7 T 17-10-2018 IPR000644 CBS domain FORC55_1750 bf9eba44a0ca67eedca327fd42ca65f1 138 Pfam PF00571 CBS domain 73 127 2.3E-12 T 17-10-2018 IPR000644 CBS domain FORC55_1750 bf9eba44a0ca67eedca327fd42ca65f1 138 SUPERFAMILY SSF54631 1 126 1.89E-31 T 17-10-2018 FORC55_1750 bf9eba44a0ca67eedca327fd42ca65f1 138 Gene3D G3DSA:3.10.580.10 1 136 2.3E-29 T 17-10-2018 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 Gene3D G3DSA:3.40.190.10 29 312 6.5E-122 T 17-10-2018 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 4.3E-86 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 Gene3D G3DSA:3.40.190.10 129 318 6.5E-122 T 17-10-2018 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 PIRSF PIRSF019574 1 345 1.8E-124 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 1.2E-41 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_1382 6fa4ea800d848f6d80d3e6c5398b6a71 345 SUPERFAMILY SSF53850 24 342 6.34E-94 T 17-10-2018 FORC55_2824 722d3e84ba88ed9a87d0031565330d8d 403 SUPERFAMILY SSF51905 3 294 1.12E-44 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_2824 722d3e84ba88ed9a87d0031565330d8d 403 Pfam PF01266 FAD dependent oxidoreductase 4 395 5.6E-66 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 FORC55_0351 8595e6c5115555829ed588d776e90819 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.3E-27 T 17-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 FORC55_0351 8595e6c5115555829ed588d776e90819 95 Gene3D G3DSA:3.30.160.100 1 95 7.1E-39 T 17-10-2018 IPR036567 Ribosome hibernation promotion factor-like FORC55_0351 8595e6c5115555829ed588d776e90819 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.2E-32 T 17-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 FORC55_0351 8595e6c5115555829ed588d776e90819 95 SUPERFAMILY SSF69754 1 95 3.27E-34 T 17-10-2018 IPR036567 Ribosome hibernation promotion factor-like FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 Pfam PF01047 MarR family 49 110 7.7E-10 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 SUPERFAMILY SSF46785 16 160 9.58E-31 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 Gene3D G3DSA:1.10.10.10 2 160 7.9E-33 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 SMART SM00347 42 145 1.7E-20 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 17-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 1.5E-7 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 1.5E-7 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 1.5E-7 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_3542 719b84225e7e92c88cdc3d1de8ca91d8 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 1.5E-7 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 FORC55_0610 7ccb68477566e45699de18475aef0de5 166 Gene3D G3DSA:3.30.910.20 22 166 4.0E-36 T 17-10-2018 IPR024930 Skp domain superfamily FORC55_0610 7ccb68477566e45699de18475aef0de5 166 SUPERFAMILY SSF111384 23 165 1.27E-31 T 17-10-2018 FORC55_0610 7ccb68477566e45699de18475aef0de5 166 SMART SM00935 12 166 5.1E-43 T 17-10-2018 IPR005632 Chaperone protein Skp GO:0051082 FORC55_0610 7ccb68477566e45699de18475aef0de5 166 PIRSF PIRSF002094 1 166 8.5E-40 T 17-10-2018 IPR005632 Chaperone protein Skp GO:0051082 FORC55_0610 7ccb68477566e45699de18475aef0de5 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 164 1.4E-25 T 17-10-2018 IPR005632 Chaperone protein Skp GO:0051082 FORC55_0229 b670e2899f5c62058edfd6317092af93 120 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 5 116 2.0E-59 T 17-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 FORC55_0229 b670e2899f5c62058edfd6317092af93 120 Pfam PF02313 Fumarate reductase subunit D 6 118 1.3E-45 T 17-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 FORC55_0229 b670e2899f5c62058edfd6317092af93 120 PIRSF PIRSF000179 1 120 2.9E-57 T 17-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 FORC55_0229 b670e2899f5c62058edfd6317092af93 120 Gene3D G3DSA:1.20.1300.10 1 120 1.8E-45 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0229 b670e2899f5c62058edfd6317092af93 120 SUPERFAMILY SSF81343 2 120 2.4E-50 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0229 b670e2899f5c62058edfd6317092af93 120 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 120 24.793 T 17-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.9E-11 T 17-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 Gene3D G3DSA:1.10.8.410 328 376 1.1E-19 T 17-10-2018 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 SUPERFAMILY SSF64518 1 376 5.36E-98 T 17-10-2018 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 4.9E-42 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 Gene3D G3DSA:3.30.70.2120 174 275 3.6E-78 T 17-10-2018 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.2E-25 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 Gene3D G3DSA:1.20.1330.10 44 327 3.6E-78 T 17-10-2018 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0668 bb72b14f5b56151e80b2b3ae57dd332a 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF13328 HD domain 56 190 1.1E-37 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF02824 TGS domain 403 462 3.3E-22 T 17-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF81301 195 407 3.11E-61 T 17-10-2018 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.30.460.10 208 340 1.3E-49 T 17-10-2018 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 SMART SM00954 250 360 1.6E-63 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.10.20.30 397 470 1.8E-31 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF55021 661 736 3.58E-11 T 17-10-2018 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF81271 396 462 2.83E-21 T 17-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.30.70.260 659 738 3.2E-16 T 17-10-2018 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF13291 ACT domain 660 736 2.3E-16 T 17-10-2018 IPR002912 ACT domain FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.7E-36 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF109604 32 205 1.69E-43 T 17-10-2018 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 736 1.8E-185 T 17-10-2018 IPR004811 RelA/SpoT family GO:0015969 FORC55_0425 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:1.10.3210.10 51 205 1.5E-36 T 17-10-2018 FORC55_0885 eef9860404dec716ce9951ebdd6c648a 296 SUPERFAMILY SSF46785 3 113 1.82E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0885 eef9860404dec716ce9951ebdd6c648a 296 Gene3D G3DSA:3.40.190.290 92 293 3.5E-50 T 17-10-2018 FORC55_0885 eef9860404dec716ce9951ebdd6c648a 296 Gene3D G3DSA:1.10.10.10 3 91 3.9E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0885 eef9860404dec716ce9951ebdd6c648a 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.1E-19 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0885 eef9860404dec716ce9951ebdd6c648a 296 Pfam PF03466 LysR substrate binding domain 89 291 2.7E-36 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_0885 eef9860404dec716ce9951ebdd6c648a 296 SUPERFAMILY SSF53850 90 294 1.21E-40 T 17-10-2018 FORC55_3230 0026a5f74f498cfcb784fcbe1ca6602b 83 Pfam PF03891 Domain of unknown function (DUF333) 33 79 3.5E-17 T 17-10-2018 IPR005590 Protein of unknown function DUF333 FORC55_0928 00643c02a677570fef498db2ba672cf4 324 Gene3D G3DSA:1.10.10.10 1 86 3.2E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0928 00643c02a677570fef498db2ba672cf4 324 Gene3D G3DSA:3.40.190.10 93 303 9.8E-98 T 17-10-2018 FORC55_0928 00643c02a677570fef498db2ba672cf4 324 Gene3D G3DSA:3.40.190.10 167 267 9.8E-98 T 17-10-2018 FORC55_0928 00643c02a677570fef498db2ba672cf4 324 Pfam PF03466 LysR substrate binding domain 91 292 8.4E-38 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_0928 00643c02a677570fef498db2ba672cf4 324 SUPERFAMILY SSF53850 91 322 3.98E-40 T 17-10-2018 FORC55_0928 00643c02a677570fef498db2ba672cf4 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0928 00643c02a677570fef498db2ba672cf4 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0928 00643c02a677570fef498db2ba672cf4 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0928 00643c02a677570fef498db2ba672cf4 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0928 00643c02a677570fef498db2ba672cf4 324 SUPERFAMILY SSF46785 1 87 4.42E-14 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0622 a3ef6974ae9c987f653e4c8abc472311 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 59.071 T 17-10-2018 IPR022958 Uncharacterised protein family UPF0294 FORC55_0622 a3ef6974ae9c987f653e4c8abc472311 281 SUPERFAMILY SSF56219 59 275 6.15E-27 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily FORC55_0622 a3ef6974ae9c987f653e4c8abc472311 281 Gene3D G3DSA:3.60.10.10 60 280 1.5E-21 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily FORC55_0622 a3ef6974ae9c987f653e4c8abc472311 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 2.7E-10 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase FORC55_3135 e1fb394c40157412a3921cac6d231e33 179 SUPERFAMILY SSF52499 1 179 5.63E-47 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 FORC55_3135 e1fb394c40157412a3921cac6d231e33 179 Gene3D G3DSA:3.40.50.850 1 179 6.5E-48 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 FORC55_3135 e1fb394c40157412a3921cac6d231e33 179 Pfam PF00857 Isochorismatase family 7 155 8.0E-29 T 17-10-2018 IPR000868 Isochorismatase-like GO:0003824 FORC55_0581 1de0019bfc92ccda1950fa2098d3a452 301 Gene3D G3DSA:3.30.1490.20 115 181 4.4E-26 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 FORC55_0581 1de0019bfc92ccda1950fa2098d3a452 301 Gene3D G3DSA:3.30.470.80 182 299 4.7E-43 T 17-10-2018 FORC55_0581 1de0019bfc92ccda1950fa2098d3a452 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.865 T 17-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK FORC55_0581 1de0019bfc92ccda1950fa2098d3a452 301 SUPERFAMILY SSF56059 98 288 2.23E-49 T 17-10-2018 FORC55_0581 1de0019bfc92ccda1950fa2098d3a452 301 Gene3D G3DSA:3.40.50.20 1 114 2.0E-39 T 17-10-2018 FORC55_0581 1de0019bfc92ccda1950fa2098d3a452 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 2.9E-87 T 17-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 FORC55_0581 1de0019bfc92ccda1950fa2098d3a452 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.6E-68 T 17-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 121 135 2.2E-13 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 64 79 2.2E-13 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 2.2E-13 T 17-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 Gene3D G3DSA:2.40.10.10 33 263 3.8E-80 T 17-10-2018 FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 Pfam PF00089 Trypsin 33 263 1.5E-52 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 Gene3D G3DSA:2.40.10.10 45 141 3.8E-80 T 17-10-2018 FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 SUPERFAMILY SSF50494 21 268 2.0E-63 T 17-10-2018 IPR009003 Peptidase S1, PA clan FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 17-10-2018 IPR033116 Serine proteases, trypsin family, serine active site FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 Gene3D G3DSA:2.60.40.10 268 307 8.3E-15 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 74 79 - T 17-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 FORC55_1585 4bf629d2248f3fe71fdaf015d21bcc34 307 SMART SM00020 32 263 1.2E-67 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 FORC55_0554 704a344abad1f4b8da601fd95ab2b60c 144 Pfam PF02657 Fe-S metabolism associated domain 21 140 4.0E-44 T 17-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like FORC55_0554 704a344abad1f4b8da601fd95ab2b60c 144 SUPERFAMILY SSF82649 3 142 6.8E-47 T 17-10-2018 FORC55_0554 704a344abad1f4b8da601fd95ab2b60c 144 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 1.7E-43 T 17-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE FORC55_0554 704a344abad1f4b8da601fd95ab2b60c 144 Gene3D G3DSA:3.90.1010.10 1 144 1.1E-47 T 17-10-2018 FORC55_2864 2c1199674ac6d7754164ad2f49888f8b 75 Pfam PF03889 Domain of unknown function 23 59 9.6E-22 T 17-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 FORC55_3411 b4a06f1c3a222bafb50157fde1430834 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3411 b4a06f1c3a222bafb50157fde1430834 225 Gene3D G3DSA:3.40.50.300 3 224 1.1E-68 T 17-10-2018 FORC55_3411 b4a06f1c3a222bafb50157fde1430834 225 SMART SM00382 34 220 2.1E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3411 b4a06f1c3a222bafb50157fde1430834 225 SUPERFAMILY SSF52540 5 223 2.79E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3411 b4a06f1c3a222bafb50157fde1430834 225 Pfam PF00005 ABC transporter 25 171 6.1E-35 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2253 2f06d9391d5dbb2bdc2b13ef5434c5e2 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 2.6E-107 T 17-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 FORC55_2253 2f06d9391d5dbb2bdc2b13ef5434c5e2 247 Gene3D G3DSA:1.10.1270.20 161 247 9.4E-34 T 17-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 FORC55_2253 2f06d9391d5dbb2bdc2b13ef5434c5e2 247 SUPERFAMILY SSF75217 1 244 1.96E-101 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_2253 2f06d9391d5dbb2bdc2b13ef5434c5e2 247 Gene3D G3DSA:3.40.1280.10 1 160 4.9E-67 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_2253 2f06d9391d5dbb2bdc2b13ef5434c5e2 247 PIRSF PIRSF000386 1 247 4.4E-101 T 17-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 FORC55_2253 2f06d9391d5dbb2bdc2b13ef5434c5e2 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.0E-68 T 17-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 FORC55_2253 2f06d9391d5dbb2bdc2b13ef5434c5e2 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 116.754 T 17-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 FORC55_2369 1a914f983516bf029ed54248a45d9735 1279 Pfam PF13502 AsmA-like C-terminal region 1017 1257 2.3E-59 T 17-10-2018 IPR032712 AsmA-like, C-terminal FORC55_2369 1a914f983516bf029ed54248a45d9735 1279 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1267 0.0 T 17-10-2018 IPR011836 Conserved hypothetical protein CHP02099 FORC55_2369 1a914f983516bf029ed54248a45d9735 1279 Pfam PF13116 Protein of unknown function 493 779 2.2E-90 T 17-10-2018 IPR025263 Domain of unknown function DUF3971 FORC55_0046 80d58343fe5148e0067832412a14427c 645 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 595 6.5E-220 T 17-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 FORC55_0046 80d58343fe5148e0067832412a14427c 645 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 100.137 T 17-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 FORC55_0046 80d58343fe5148e0067832412a14427c 645 Gene3D G3DSA:3.20.20.540 214 527 1.1E-155 T 17-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 FORC55_0046 80d58343fe5148e0067832412a14427c 645 Pfam PF13667 ThiC-associated domain 22 103 6.4E-32 T 17-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 FORC55_0046 80d58343fe5148e0067832412a14427c 645 Pfam PF01964 Radical SAM ThiC family 144 592 2.9E-201 T 17-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 FORC55_2882 180a749994f319569bf4c0041f21e844 461 Gene3D G3DSA:3.40.50.300 215 418 1.2E-44 T 17-10-2018 FORC55_2882 180a749994f319569bf4c0041f21e844 461 Pfam PF00271 Helicase conserved C-terminal domain 230 338 4.5E-27 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2882 180a749994f319569bf4c0041f21e844 461 Gene3D G3DSA:3.40.50.300 1 210 2.4E-75 T 17-10-2018 FORC55_2882 180a749994f319569bf4c0041f21e844 461 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 447 50.27 T 17-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 FORC55_2882 180a749994f319569bf4c0041f21e844 461 SUPERFAMILY SSF52540 73 359 2.18E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2882 180a749994f319569bf4c0041f21e844 461 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_2882 180a749994f319569bf4c0041f21e844 461 SMART SM00487 20 219 1.4E-60 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2882 180a749994f319569bf4c0041f21e844 461 SMART SM00490 257 338 1.5E-30 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_2882 180a749994f319569bf4c0041f21e844 461 Pfam PF00270 DEAD/DEAH box helicase 26 194 4.3E-46 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 Gene3D G3DSA:3.40.190.290 89 296 6.6E-65 T 17-10-2018 FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 Gene3D G3DSA:1.10.10.10 2 85 1.9E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.8E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.8E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.8E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 SUPERFAMILY SSF46785 4 112 8.71E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 Pfam PF03466 LysR substrate binding domain 97 258 4.2E-12 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 59.842 T 17-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 SUPERFAMILY SSF53850 96 292 1.23E-21 T 17-10-2018 FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 5.7E-104 T 17-10-2018 IPR017685 HTH-type transcriptional regulator ArgP FORC55_2305 0e5b4c047cc6ed05a275bbcf71548082 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.2E-15 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2553 fb2195c9244b2a550c5b0423de9b7085 314 Pfam PF07507 WavE lipopolysaccharide synthesis 9 307 2.9E-111 T 17-10-2018 IPR011122 WavE lipopolysaccharide synthesis FORC55_0111 c3626810d6a23747fe5318b01c176a6c 338 Pfam PF12146 Serine aminopeptidase, S33 53 310 6.9E-66 T 17-10-2018 IPR022742 Serine aminopeptidase, S33 FORC55_0111 c3626810d6a23747fe5318b01c176a6c 338 Gene3D G3DSA:3.40.50.1820 24 329 4.3E-48 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0111 c3626810d6a23747fe5318b01c176a6c 338 SUPERFAMILY SSF53474 35 323 3.81E-38 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2426 c13a43ebd0407d61c776fb24823ff1fe 91 Gene3D G3DSA:3.40.1260.10 1 91 5.8E-19 T 17-10-2018 IPR027396 DsrEFH-like FORC55_2426 c13a43ebd0407d61c776fb24823ff1fe 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 91 1.4E-23 T 17-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 FORC55_2426 c13a43ebd0407d61c776fb24823ff1fe 91 Pfam PF04077 DsrH like protein 10 87 2.3E-20 T 17-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 FORC55_2426 c13a43ebd0407d61c776fb24823ff1fe 91 SUPERFAMILY SSF75169 1 91 3.92E-21 T 17-10-2018 IPR027396 DsrEFH-like FORC55_1027 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 2.1E-30 T 17-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_1027 8e2e093d3a141b098f5babaf6cf59ea4 401 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.06 T 17-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_1027 8e2e093d3a141b098f5babaf6cf59ea4 401 Gene3D G3DSA:3.40.50.720 1 399 2.5E-181 T 17-10-2018 FORC55_1027 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.7E-37 T 17-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_1027 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 4.7E-112 T 17-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_3406 f245590c438e069dccff6f7014ea2d16 236 Gene3D G3DSA:3.30.1360.40 5 84 5.8E-13 T 17-10-2018 FORC55_3406 f245590c438e069dccff6f7014ea2d16 236 Gene3D G3DSA:2.40.100.10 91 228 5.0E-47 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily FORC55_3406 f245590c438e069dccff6f7014ea2d16 236 SMART SM00796 5 205 4.8E-81 T 17-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D FORC55_3406 f245590c438e069dccff6f7014ea2d16 236 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 205 4.7E-62 T 17-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D FORC55_3406 f245590c438e069dccff6f7014ea2d16 236 SUPERFAMILY SSF50891 92 221 9.1E-39 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily FORC55_3406 f245590c438e069dccff6f7014ea2d16 236 SUPERFAMILY SSF160467 7 97 2.35E-13 T 17-10-2018 FORC55_2434 f259d0d9c7f4debe36f449a2905fa908 326 PIRSF PIRSF005651 1 326 1.6E-93 T 17-10-2018 IPR010200 HflC GO:0016021|GO:0052547 FORC55_2434 f259d0d9c7f4debe36f449a2905fa908 326 SMART SM00244 18 218 3.8E-47 T 17-10-2018 IPR001107 Band 7 domain FORC55_2434 f259d0d9c7f4debe36f449a2905fa908 326 SUPERFAMILY SSF117892 56 223 3.53E-22 T 17-10-2018 IPR036013 Band 7/SPFH domain superfamily FORC55_2434 f259d0d9c7f4debe36f449a2905fa908 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 2.1E-142 T 17-10-2018 IPR010200 HflC GO:0016021|GO:0052547 FORC55_2434 f259d0d9c7f4debe36f449a2905fa908 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 5.5E-29 T 17-10-2018 IPR001107 Band 7 domain FORC55_2430 cf38cf63a15a24d111c661c199f903ce 259 Gene3D G3DSA:3.10.50.40 145 258 5.6E-43 T 17-10-2018 FORC55_2430 cf38cf63a15a24d111c661c199f903ce 259 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 249 1.9E-30 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain FORC55_2430 cf38cf63a15a24d111c661c199f903ce 259 SUPERFAMILY SSF54534 46 251 6.32E-64 T 17-10-2018 FORC55_2430 cf38cf63a15a24d111c661c199f903ce 259 Gene3D G3DSA:1.10.287.460 30 144 1.2E-33 T 17-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 FORC55_2430 cf38cf63a15a24d111c661c199f903ce 259 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 155 1.5E-34 T 17-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 FORC55_0126 e83afb0ad95a2735087682aaafb7a8bd 213 SUPERFAMILY SSF46689 7 80 3.83E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_0126 e83afb0ad95a2735087682aaafb7a8bd 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 17-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site FORC55_0126 e83afb0ad95a2735087682aaafb7a8bd 213 Gene3D G3DSA:1.10.357.10 56 213 1.1E-34 T 17-10-2018 FORC55_0126 e83afb0ad95a2735087682aaafb7a8bd 213 Gene3D G3DSA:1.10.10.60 5 55 3.5E-23 T 17-10-2018 FORC55_0126 e83afb0ad95a2735087682aaafb7a8bd 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.3E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_0994 80bbcf533332a27625a99dc494b615c5 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.7E-172 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 FORC55_0994 80bbcf533332a27625a99dc494b615c5 378 PIRSF PIRSF000267 2 377 1.2E-123 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 FORC55_0994 80bbcf533332a27625a99dc494b615c5 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.1E-107 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 FORC55_1495 cc2fa66334fb7032d2cbf3efea3b53be 120 SUPERFAMILY SSF55620 1 119 1.11E-41 T 17-10-2018 FORC55_1495 cc2fa66334fb7032d2cbf3efea3b53be 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.3E-35 T 17-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 FORC55_1495 cc2fa66334fb7032d2cbf3efea3b53be 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.0E-33 T 17-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 FORC55_1495 cc2fa66334fb7032d2cbf3efea3b53be 120 Gene3D G3DSA:3.30.479.10 1 120 7.1E-50 T 17-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 FORC55_1495 cc2fa66334fb7032d2cbf3efea3b53be 120 PIRSF PIRSF006113 1 120 4.4E-53 T 17-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 FORC55_3224 f7032f3560177e98a555536a111dc59d 351 SUPERFAMILY SSF161098 142 329 1.19E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3224 f7032f3560177e98a555536a111dc59d 351 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 58 3.4E-8 T 17-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain FORC55_3224 f7032f3560177e98a555536a111dc59d 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 165 346 5.5E-27 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3224 f7032f3560177e98a555536a111dc59d 351 Gene3D G3DSA:1.10.3720.10 135 349 1.1E-17 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 SUPERFAMILY SSF47928 3 105 3.79E-26 T 17-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 6.5E-25 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 6.5E-25 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 6.5E-25 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 6.5E-25 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 6.5E-25 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 2.3E-50 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.5E-59 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 17-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 Gene3D G3DSA:1.10.520.20 2 106 6.3E-37 T 17-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2649 a54f423b65c68665d7cd0a6a7104a3d7 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.01 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_3310 c32bd5338f25e4ddef557aef693a27e9 134 SUPERFAMILY SSF58104 5 127 4.32E-10 T 17-10-2018 FORC55_3310 c32bd5338f25e4ddef557aef693a27e9 134 Gene3D G3DSA:1.10.287.950 1 127 3.6E-11 T 17-10-2018 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 Pfam PF00672 HAMP domain 165 211 1.2E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 SUPERFAMILY SSF58104 184 493 1.83E-69 T 17-10-2018 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 SMART SM00304 164 216 1.6E-10 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 387 8.3E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 140 160 8.3E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 329 356 8.3E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 SMART SM00283 231 492 2.5E-68 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 295 459 2.4E-41 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3558 ff315bdaffbb0505e785c1b5ae94d255 493 Gene3D G3DSA:1.10.287.950 164 493 6.7E-71 T 17-10-2018 FORC55_0238 d226a4b21d610548744e57a463452220 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 6.7E-16 T 17-10-2018 IPR005149 Transcription regulator PadR, N-terminal FORC55_0238 d226a4b21d610548744e57a463452220 179 Pfam PF10400 Virulence activator alpha C-term 92 175 6.9E-15 T 17-10-2018 IPR018309 Transcription regulator PadR, C-terminal FORC55_0238 d226a4b21d610548744e57a463452220 179 Gene3D G3DSA:1.10.10.10 1 89 7.5E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0238 d226a4b21d610548744e57a463452220 179 SUPERFAMILY SSF46785 3 178 1.65E-45 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0098 cccf5f85638ba9138e18897728430ecc 255 SUPERFAMILY SSF69618 1 241 7.85E-49 T 17-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_0098 cccf5f85638ba9138e18897728430ecc 255 Gene3D G3DSA:3.40.50.10090 4 240 6.1E-67 T 17-10-2018 FORC55_0098 cccf5f85638ba9138e18897728430ecc 255 Gene3D G3DSA:3.40.50.10090 32 161 6.1E-67 T 17-10-2018 FORC55_0098 cccf5f85638ba9138e18897728430ecc 255 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 237 2.7E-32 T 17-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 FORC55_1433 368488b0f7b52fe84c5b6e5ae048a589 342 Gene3D G3DSA:3.40.190.10 125 230 8.1E-51 T 17-10-2018 FORC55_1433 368488b0f7b52fe84c5b6e5ae048a589 342 SUPERFAMILY SSF53850 29 261 2.94E-49 T 17-10-2018 FORC55_1433 368488b0f7b52fe84c5b6e5ae048a589 342 SMART SM00062 38 267 1.7E-54 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1433 368488b0f7b52fe84c5b6e5ae048a589 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 6.0E-30 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1433 368488b0f7b52fe84c5b6e5ae048a589 342 Gene3D G3DSA:3.40.190.10 33 244 8.1E-51 T 17-10-2018 FORC55_0391 7635eff40f61505fef06c11744f49f35 342 SUPERFAMILY SSF53756 26 285 2.69E-11 T 17-10-2018 FORC55_0391 7635eff40f61505fef06c11744f49f35 342 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 1 291 5.9E-135 T 17-10-2018 IPR005262 Conserved hypothetical protein CHP00661 FORC55_0391 7635eff40f61505fef06c11744f49f35 342 Gene3D G3DSA:3.40.50.2000 162 287 1.8E-6 T 17-10-2018 FORC55_0391 7635eff40f61505fef06c11744f49f35 342 Pfam PF13528 Glycosyl transferase family 1 9 275 1.6E-26 T 17-10-2018 FORC55_3193 11d882a2a5765b4294366c4a355659f0 312 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 1 311 7.2E-141 T 17-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain FORC55_0717 f4f6c2687c5024c757fb72a8f708d157 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 7.0E-30 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 FORC55_0717 f4f6c2687c5024c757fb72a8f708d157 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.35 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 FORC55_0717 f4f6c2687c5024c757fb72a8f708d157 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 6.1E-20 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 FORC55_0717 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 2.2E-12 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 FORC55_0717 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 2.2E-12 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 FORC55_0717 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 2.2E-12 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 FORC55_1775 211a88ad2bfe553016831c69801677b0 198 Pfam PF05036 Sporulation related domain 122 187 3.7E-11 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 FORC55_1775 211a88ad2bfe553016831c69801677b0 198 Gene3D G3DSA:3.30.70.1070 116 190 6.8E-10 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_1775 211a88ad2bfe553016831c69801677b0 198 SUPERFAMILY SSF110997 121 194 2.48E-15 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_3307 635bdac370385e61e28ae0a55929c2e0 212 SUPERFAMILY SSF56784 20 205 1.79E-48 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_3307 635bdac370385e61e28ae0a55929c2e0 212 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 200 5.4E-30 T 17-10-2018 FORC55_3307 635bdac370385e61e28ae0a55929c2e0 212 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 139 200 1.8E-15 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3307 635bdac370385e61e28ae0a55929c2e0 212 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 20 200 6.3E-56 T 17-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase FORC55_3307 635bdac370385e61e28ae0a55929c2e0 212 Gene3D G3DSA:1.10.150.240 35 101 7.7E-48 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 FORC55_3307 635bdac370385e61e28ae0a55929c2e0 212 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 175 9.4E-6 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_3307 635bdac370385e61e28ae0a55929c2e0 212 Gene3D G3DSA:3.40.50.1000 23 202 7.7E-48 T 17-10-2018 IPR023214 HAD superfamily FORC55_2958 3ec2b114eac9856f49eea2e2bc86833f 215 SMART SM00934 5 207 5.3E-25 T 17-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_2958 3ec2b114eac9856f49eea2e2bc86833f 215 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 204 7.3E-29 T 17-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_2958 3ec2b114eac9856f49eea2e2bc86833f 215 SUPERFAMILY SSF51366 3 209 1.64E-34 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_2958 3ec2b114eac9856f49eea2e2bc86833f 215 Gene3D G3DSA:3.20.20.70 1 215 4.6E-74 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2416 5a15570bde28356a90f1e5f4a22a9554 260 SUPERFAMILY SSF56935 22 200 3.26E-5 T 17-10-2018 FORC55_2416 5a15570bde28356a90f1e5f4a22a9554 260 Pfam PF04338 Protein of unknown function, DUF481 45 260 1.2E-51 T 17-10-2018 IPR007433 Protein of unknown function DUF481 FORC55_0921 0f6125e2a5adc12120e5fddae96a81f5 288 Gene3D G3DSA:3.40.50.300 4 285 1.2E-90 T 17-10-2018 FORC55_0921 0f6125e2a5adc12120e5fddae96a81f5 288 SUPERFAMILY SSF52540 6 257 4.35E-69 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0921 0f6125e2a5adc12120e5fddae96a81f5 288 Pfam PF00005 ABC transporter 26 186 3.4E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0921 0f6125e2a5adc12120e5fddae96a81f5 288 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 280 2.3E-6 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_0921 0f6125e2a5adc12120e5fddae96a81f5 288 SMART SM00382 35 244 1.0E-16 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0921 0f6125e2a5adc12120e5fddae96a81f5 288 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0744 602d5420c9433dd6e250eae3abf8be5e 166 Pfam PF14539 Domain of unknown function (DUF4442) 14 151 1.4E-24 T 17-10-2018 IPR027961 Protein of unknown function DUF4442 FORC55_0744 602d5420c9433dd6e250eae3abf8be5e 166 Gene3D G3DSA:3.10.129.10 12 157 8.8E-27 T 17-10-2018 FORC55_0744 602d5420c9433dd6e250eae3abf8be5e 166 SUPERFAMILY SSF54637 11 156 6.49E-23 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_0262 cd4e690468cd6c9a5164b74a08b1ffc2 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 248 2.6E-9 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_0262 cd4e690468cd6c9a5164b74a08b1ffc2 254 SUPERFAMILY SSF53850 21 249 5.43E-22 T 17-10-2018 FORC55_0262 cd4e690468cd6c9a5164b74a08b1ffc2 254 Gene3D G3DSA:3.40.190.10 31 241 2.4E-12 T 17-10-2018 FORC55_0262 cd4e690468cd6c9a5164b74a08b1ffc2 254 Gene3D G3DSA:3.40.190.10 114 207 2.4E-12 T 17-10-2018 FORC55_2063 de5b5f9fcaaee4659728ffc59f7811af 264 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.6E-52 T 17-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 FORC55_0366 049838404fec76e2c849e9ecae910245 242 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.5E-44 T 17-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 FORC55_0366 049838404fec76e2c849e9ecae910245 242 Pfam PF01553 Acyltransferase 60 180 4.1E-31 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_0366 049838404fec76e2c849e9ecae910245 242 SUPERFAMILY SSF69593 7 237 3.79E-59 T 17-10-2018 FORC55_0366 049838404fec76e2c849e9ecae910245 242 SMART SM00563 67 182 1.9E-40 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_0489 1999b5cad25dcf2d9309f92843bbbb52 231 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 12 200 1.3E-28 T 17-10-2018 IPR008517 Protein of unknown function DUF799 FORC55_0489 1999b5cad25dcf2d9309f92843bbbb52 231 Gene3D G3DSA:3.40.50.10610 29 194 2.3E-41 T 17-10-2018 FORC55_2845 d992910595d62c6a3dbaab2bb03927bd 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 512 678 8.6E-37 T 17-10-2018 IPR000160 GGDEF domain FORC55_2845 d992910595d62c6a3dbaab2bb03927bd 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 515 677 3.2E-37 T 17-10-2018 IPR000160 GGDEF domain FORC55_2845 d992910595d62c6a3dbaab2bb03927bd 693 SUPERFAMILY SSF55073 520 679 5.34E-37 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_2845 d992910595d62c6a3dbaab2bb03927bd 693 SMART SM00267 504 681 2.9E-46 T 17-10-2018 IPR000160 GGDEF domain FORC55_2845 d992910595d62c6a3dbaab2bb03927bd 693 Gene3D G3DSA:3.30.70.270 501 680 1.2E-45 T 17-10-2018 FORC55_2845 d992910595d62c6a3dbaab2bb03927bd 693 Gene3D G3DSA:3.30.450.40 165 319 7.0E-9 T 17-10-2018 IPR029016 GAF-like domain superfamily FORC55_2845 d992910595d62c6a3dbaab2bb03927bd 693 SUPERFAMILY SSF55781 162 316 1.2E-8 T 17-10-2018 FORC55_0073 91c35441dce8db9d18cc868b231f902d 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 2.4E-75 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 FORC55_0073 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.7E-51 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 FORC55_0073 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.7E-51 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 FORC55_0073 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.7E-51 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 FORC55_0073 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.7E-51 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 FORC55_0073 91c35441dce8db9d18cc868b231f902d 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.049 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 FORC55_0073 91c35441dce8db9d18cc868b231f902d 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 17-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site FORC55_0073 91c35441dce8db9d18cc868b231f902d 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.1E-66 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 FORC55_3516 9a5b6107b6cf51b68ab13c689def6c5d 116 Pfam PF05656 Protein of unknown function (DUF805) 15 107 1.4E-23 T 17-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 FORC55_0251 c4dc0c5057ad1dd968bf892d08e5bfbe 194 Pfam PF05137 Fimbrial assembly protein (PilN) 102 178 8.3E-16 T 17-10-2018 IPR007813 Fimbrial assembly PilN FORC55_2583 4368dc21de1b7ec19ad13e72cbb598c6 369 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 112 1.5E-5 T 17-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 FORC55_2583 4368dc21de1b7ec19ad13e72cbb598c6 369 Gene3D G3DSA:1.10.1040.10 204 357 2.1E-38 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 FORC55_2583 4368dc21de1b7ec19ad13e72cbb598c6 369 SUPERFAMILY SSF48179 196 369 1.19E-41 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 FORC55_2583 4368dc21de1b7ec19ad13e72cbb598c6 369 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 194 338 6.3E-31 T 17-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 FORC55_2583 4368dc21de1b7ec19ad13e72cbb598c6 369 Gene3D G3DSA:3.40.50.720 2 203 4.0E-46 T 17-10-2018 FORC55_2583 4368dc21de1b7ec19ad13e72cbb598c6 369 SUPERFAMILY SSF51735 4 187 2.43E-13 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1510 87915a0cd8705166a669f252f7702b6f 101 SUPERFAMILY SSF52794 1 101 2.2E-36 T 17-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 FORC55_1510 87915a0cd8705166a669f252f7702b6f 101 Gene3D G3DSA:3.40.50.2300 2 101 5.8E-39 T 17-10-2018 FORC55_1510 87915a0cd8705166a669f252f7702b6f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 1.4E-24 T 17-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 FORC55_0133 1830247090a6d3b4259f992b101b613a 152 Gene3D G3DSA:3.30.70.330 44 151 5.6E-26 T 17-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily FORC55_0133 1830247090a6d3b4259f992b101b613a 152 SMART SM00360 65 137 4.4E-20 T 17-10-2018 IPR000504 RNA recognition motif domain GO:0003676 FORC55_0133 1830247090a6d3b4259f992b101b613a 152 SUPERFAMILY SSF54928 45 143 5.51E-26 T 17-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 FORC55_0133 1830247090a6d3b4259f992b101b613a 152 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 135 7.2E-17 T 17-10-2018 IPR000504 RNA recognition motif domain GO:0003676 FORC55_1280 17d580c58b7d0afe1558ae3384e05b89 457 PIRSF PIRSF037714 1 455 4.9E-163 T 17-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein FORC55_1280 17d580c58b7d0afe1558ae3384e05b89 457 Pfam PF01618 MotA/TolQ/ExbB proton channel family 310 429 3.7E-30 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel FORC55_1913 10b876dd977d3f09bd5e87dc3fe81e4f 101 Gene3D G3DSA:3.10.20.280 1 90 1.4E-33 T 17-10-2018 IPR037021 RnfH superfamily FORC55_1913 10b876dd977d3f09bd5e87dc3fe81e4f 101 SUPERFAMILY SSF54285 4 80 9.29E-26 T 17-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp FORC55_1913 10b876dd977d3f09bd5e87dc3fe81e4f 101 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 25.351 T 17-10-2018 IPR005346 RnfH protein FORC55_1913 10b876dd977d3f09bd5e87dc3fe81e4f 101 Pfam PF03658 RnfH family Ubiquitin 6 88 2.8E-34 T 17-10-2018 IPR005346 RnfH protein FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 SUPERFAMILY SSF46626 55 240 7.86E-31 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 Gene3D G3DSA:1.10.760.10 145 320 5.7E-74 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 PIRSF PIRSF000006 1 324 1.5E-107 T 17-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 Gene3D G3DSA:1.20.58.1490 1 94 5.5E-34 T 17-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 5.5E-14 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 1.6E-11 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 83 1.3E-23 T 17-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 SUPERFAMILY SSF46626 240 322 5.47E-22 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 323 1.2E-57 T 17-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 Gene3D G3DSA:1.10.760.10 211 297 5.7E-74 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 PRINTS PR00605 Class IC cytochrome C signature 295 317 5.8E-6 T 17-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 FORC55_1367 e9778248f1919052fdabbc46a342c12a 326 PRINTS PR00605 Class IC cytochrome C signature 166 177 5.8E-6 T 17-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 FORC55_2748 829df790ffc8bbb5b0801d5bfe7bfa93 273 Pfam PF12849 PBP superfamily domain 24 258 1.1E-42 T 17-10-2018 IPR024370 PBP domain FORC55_2748 829df790ffc8bbb5b0801d5bfe7bfa93 273 Gene3D G3DSA:3.40.190.10 99 233 3.4E-85 T 17-10-2018 FORC55_2748 829df790ffc8bbb5b0801d5bfe7bfa93 273 Gene3D G3DSA:3.40.190.10 30 270 3.4E-85 T 17-10-2018 FORC55_2748 829df790ffc8bbb5b0801d5bfe7bfa93 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 271 7.5E-78 T 17-10-2018 IPR011862 Phosphate binding protein GO:0042301 FORC55_2748 829df790ffc8bbb5b0801d5bfe7bfa93 273 SUPERFAMILY SSF53850 16 272 2.32E-74 T 17-10-2018 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 SUPERFAMILY SSF143968 323 459 7.98E-51 T 17-10-2018 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 5.1E-161 T 17-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 475 565 1.2E-16 T 17-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 SUPERFAMILY SSF50475 3 322 5.49E-123 T 17-10-2018 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 3.5E-162 T 17-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 Gene3D G3DSA:3.40.1670.10 337 453 1.1E-42 T 17-10-2018 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 Gene3D G3DSA:3.40.1670.10 482 584 2.6E-20 T 17-10-2018 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 Gene3D G3DSA:1.20.5.570 585 613 6.6E-16 T 17-10-2018 FORC55_2471 5ca70e28f58ab0ff6234fdbcdb70ddf4 613 SUPERFAMILY SSF143968 477 611 3.01E-29 T 17-10-2018 FORC55_2654 168d1443a4e9daac487eaf633b55d5ff 293 SMART SM00470 40 130 1.3E-35 T 17-10-2018 IPR003115 ParB/Sulfiredoxin FORC55_2654 168d1443a4e9daac487eaf633b55d5ff 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 214 2.6E-58 T 17-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 FORC55_2654 168d1443a4e9daac487eaf633b55d5ff 293 Gene3D G3DSA:1.10.10.2830 117 230 6.2E-35 T 17-10-2018 FORC55_2654 168d1443a4e9daac487eaf633b55d5ff 293 SUPERFAMILY SSF110849 41 132 3.4E-28 T 17-10-2018 IPR036086 ParB/Sulfiredoxin superfamily FORC55_2654 168d1443a4e9daac487eaf633b55d5ff 293 Gene3D G3DSA:3.90.1530.30 53 116 6.0E-28 T 17-10-2018 FORC55_2654 168d1443a4e9daac487eaf633b55d5ff 293 SUPERFAMILY SSF109709 122 230 1.31E-33 T 17-10-2018 FORC55_2654 168d1443a4e9daac487eaf633b55d5ff 293 Pfam PF02195 ParB-like nuclease domain 43 130 7.0E-29 T 17-10-2018 IPR003115 ParB/Sulfiredoxin FORC55_2470 32e35f472026970f4b0dad16f9fb7424 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 FORC55_2470 32e35f472026970f4b0dad16f9fb7424 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 79 9.4E-15 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 FORC55_2470 32e35f472026970f4b0dad16f9fb7424 89 SUPERFAMILY SSF54292 1 87 9.44E-27 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 FORC55_2470 32e35f472026970f4b0dad16f9fb7424 89 Gene3D G3DSA:3.10.20.30 1 89 3.2E-24 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_1806 f055fb687e68f2e9e17f13c0a2c3c05c 257 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 7.4E-42 T 17-10-2018 FORC55_1806 f055fb687e68f2e9e17f13c0a2c3c05c 257 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 28.063 T 17-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 FORC55_2829 66136d58c2a0fc7d24e17ed50ffd813a 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_2829 66136d58c2a0fc7d24e17ed50ffd813a 147 Gene3D G3DSA:3.40.930.10 1 147 2.3E-54 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_2829 66136d58c2a0fc7d24e17ed50ffd813a 147 SUPERFAMILY SSF55804 1 146 1.44E-40 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 FORC55_2829 66136d58c2a0fc7d24e17ed50ffd813a 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.3E-33 T 17-10-2018 IPR002178 PTS EIIA type-2 domain FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 PRINTS PR00721 Stomatin signature 132 155 2.0E-28 T 17-10-2018 IPR001972 Stomatin family GO:0016020 FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 PRINTS PR00721 Stomatin signature 156 174 2.0E-28 T 17-10-2018 IPR001972 Stomatin family GO:0016020 FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 PRINTS PR00721 Stomatin signature 77 98 2.0E-28 T 17-10-2018 IPR001972 Stomatin family GO:0016020 FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 PRINTS PR00721 Stomatin signature 112 129 2.0E-28 T 17-10-2018 IPR001972 Stomatin family GO:0016020 FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 PRINTS PR00721 Stomatin signature 175 196 2.0E-28 T 17-10-2018 IPR001972 Stomatin family GO:0016020 FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 17-10-2018 IPR018080 Band 7/stomatin-like, conserved site FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 Pfam PF16200 C-terminal region of band_7 242 302 5.9E-7 T 17-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 Gene3D G3DSA:3.30.479.30 50 182 3.0E-43 T 17-10-2018 FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 SUPERFAMILY SSF117892 53 187 1.96E-41 T 17-10-2018 IPR036013 Band 7/SPFH domain superfamily FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 SMART SM00244 22 180 3.1E-59 T 17-10-2018 IPR001107 Band 7 domain FORC55_1799 384d2322f9599e6327bc1801c5583f0b 306 Pfam PF01145 SPFH domain / Band 7 family 26 195 1.5E-33 T 17-10-2018 IPR001107 Band 7 domain FORC55_2162 60929050203e46434e5d7065c5994b4b 404 Pfam PF13657 HipA N-terminal domain 8 112 2.3E-17 T 17-10-2018 IPR017508 HipA, N-terminal subdomain 1 FORC55_2162 60929050203e46434e5d7065c5994b4b 404 Gene3D G3DSA:1.10.1070.20 241 356 2.5E-8 T 17-10-2018 FORC55_2162 60929050203e46434e5d7065c5994b4b 404 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 113 1.0E-14 T 17-10-2018 IPR017508 HipA, N-terminal subdomain 1 FORC55_2162 60929050203e46434e5d7065c5994b4b 404 Pfam PF07804 HipA-like C-terminal domain 140 377 3.7E-52 T 17-10-2018 IPR012893 HipA-like, C-terminal FORC55_3354 cb2bf0b43a16c9ceffed347c4c49cb26 249 SUPERFAMILY SSF47384 11 50 1.39E-5 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_3354 cb2bf0b43a16c9ceffed347c4c49cb26 249 Pfam PF00512 His Kinase A (phospho-acceptor) domain 17 59 3.9E-8 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_3354 cb2bf0b43a16c9ceffed347c4c49cb26 249 SUPERFAMILY SSF55874 109 231 4.19E-19 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3354 cb2bf0b43a16c9ceffed347c4c49cb26 249 Gene3D G3DSA:3.30.565.10 117 237 1.3E-21 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_3354 cb2bf0b43a16c9ceffed347c4c49cb26 249 Gene3D G3DSA:1.10.287.130 1 112 1.9E-22 T 17-10-2018 FORC55_3354 cb2bf0b43a16c9ceffed347c4c49cb26 249 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 162 228 1.3E-7 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0177 e1d9da715c0d411f12077225932437c0 240 SUPERFAMILY SSF52172 3 127 2.28E-42 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0177 e1d9da715c0d411f12077225932437c0 240 SMART SM00862 156 232 2.3E-21 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_0177 e1d9da715c0d411f12077225932437c0 240 SUPERFAMILY SSF46894 132 234 2.35E-27 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_0177 e1d9da715c0d411f12077225932437c0 240 Gene3D G3DSA:1.10.10.10 130 239 4.3E-38 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0177 e1d9da715c0d411f12077225932437c0 240 Gene3D G3DSA:3.40.50.2300 1 125 3.2E-40 T 17-10-2018 FORC55_0177 e1d9da715c0d411f12077225932437c0 240 SMART SM00448 5 116 3.6E-45 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0177 e1d9da715c0d411f12077225932437c0 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 4.6E-22 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_0177 e1d9da715c0d411f12077225932437c0 240 Pfam PF00072 Response regulator receiver domain 7 117 1.4E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2595 4524a5f8f1e811a2de2b1974345c6bd2 101 Gene3D G3DSA:1.10.260.40 5 95 4.0E-5 T 17-10-2018 FORC55_2595 4524a5f8f1e811a2de2b1974345c6bd2 101 SUPERFAMILY SSF47413 17 79 2.28E-7 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2595 4524a5f8f1e811a2de2b1974345c6bd2 101 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 27 75 6.0E-5 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_0880 10df36fca72a479c8da3f329e93f1415 315 Pfam PF03466 LysR substrate binding domain 90 296 9.0E-47 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_0880 10df36fca72a479c8da3f329e93f1415 315 Gene3D G3DSA:3.40.190.10 94 293 5.7E-60 T 17-10-2018 FORC55_0880 10df36fca72a479c8da3f329e93f1415 315 Gene3D G3DSA:3.40.190.10 165 267 5.7E-60 T 17-10-2018 FORC55_0880 10df36fca72a479c8da3f329e93f1415 315 SUPERFAMILY SSF53850 90 299 1.54E-47 T 17-10-2018 FORC55_0880 10df36fca72a479c8da3f329e93f1415 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.4E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0880 10df36fca72a479c8da3f329e93f1415 315 Gene3D G3DSA:1.10.10.10 5 91 1.9E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0880 10df36fca72a479c8da3f329e93f1415 315 SUPERFAMILY SSF46785 7 114 7.02E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0938 3ca49ab7715ff395e1dbb20558d30428 663 Gene3D G3DSA:1.10.287.950 334 663 3.9E-71 T 17-10-2018 FORC55_0938 3ca49ab7715ff395e1dbb20558d30428 663 SMART SM00304 334 386 3.1E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_0938 3ca49ab7715ff395e1dbb20558d30428 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 629 9.3E-44 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0938 3ca49ab7715ff395e1dbb20558d30428 663 SUPERFAMILY SSF58104 354 663 3.92E-72 T 17-10-2018 FORC55_0938 3ca49ab7715ff395e1dbb20558d30428 663 SMART SM00283 401 662 7.0E-71 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_0938 3ca49ab7715ff395e1dbb20558d30428 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 3.1E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0938 3ca49ab7715ff395e1dbb20558d30428 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 3.1E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_0938 3ca49ab7715ff395e1dbb20558d30428 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 3.1E-23 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_1473 1fe22a98443206e9d1241ffd640615ad 1023 SUPERFAMILY SSF56601 735 1005 1.85E-26 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_1473 1fe22a98443206e9d1241ffd640615ad 1023 Gene3D G3DSA:3.40.710.10 799 1016 1.0E-13 T 17-10-2018 FORC55_1473 1fe22a98443206e9d1241ffd640615ad 1023 SUPERFAMILY SSF56601 565 628 5.63E-6 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_1473 1fe22a98443206e9d1241ffd640615ad 1023 Gene3D G3DSA:1.10.3810.10 135 374 7.3E-6 T 17-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_1473 1fe22a98443206e9d1241ffd640615ad 1023 SUPERFAMILY SSF53955 152 372 5.62E-9 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_1473 1fe22a98443206e9d1241ffd640615ad 1023 Pfam PF00912 Transglycosylase 142 339 1.9E-23 T 17-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_3370 b408b95c51c87efc64fe09932be9f5f0 386 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 303 3.1E-73 T 17-10-2018 IPR032811 Putative conjugal transfer protein TraF-related FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 547 1.0E-5 T 17-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 Gene3D G3DSA:3.40.50.970 4 199 6.2E-57 T 17-10-2018 FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 33.16 T 17-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 PIRSF PIRSF004983 3 570 3.5E-196 T 17-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 SUPERFAMILY SSF52518 380 568 3.75E-25 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 Gene3D G3DSA:3.40.50.1220 222 344 6.2E-44 T 17-10-2018 FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 141 2.6E-27 T 17-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 402 4.2E-46 T 17-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 SUPERFAMILY SSF52518 9 191 1.55E-28 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 2.7E-138 T 17-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 FORC55_0864 7d07eab6ee37390a9fcc0458162a6d13 570 Gene3D G3DSA:3.40.50.970 366 569 2.6E-49 T 17-10-2018 FORC55_3537 56c5af68a3dc7ceea8deddc1967d09a7 202 Gene3D G3DSA:2.60.120.620 3 193 4.5E-55 T 17-10-2018 FORC55_3537 56c5af68a3dc7ceea8deddc1967d09a7 202 SMART SM00702 13 189 1.2E-47 T 17-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 FORC55_3537 56c5af68a3dc7ceea8deddc1967d09a7 202 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 99 189 9.5E-21 T 17-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 SMART SM00283 379 626 8.5E-95 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 Pfam PF13188 PAS domain 42 93 3.6E-4 T 17-10-2018 IPR000014 PAS domain FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 Gene3D G3DSA:1.10.287.950 325 627 5.5E-87 T 17-10-2018 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 504 1.0E-53 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 1.0E-53 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 554 583 1.0E-53 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 506 535 1.0E-53 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 SUPERFAMILY SSF58104 346 626 1.96E-73 T 17-10-2018 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 594 4.8E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 SMART SM00304 553 602 81.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 SMART SM00304 326 378 2.0E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 Pfam PF13426 PAS domain 179 281 0.0051 T 17-10-2018 IPR000014 PAS domain FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 Pfam PF00672 HAMP domain 327 374 3.8E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 Gene3D G3DSA:3.30.450.20 162 281 1.9E-34 T 17-10-2018 FORC55_3667 01cccdf84e0f0c20becea43ebe305ca0 678 Gene3D G3DSA:3.30.450.20 36 157 3.8E-31 T 17-10-2018 FORC55_1637 68519d1e92927b06fde5867bdea0edff 458 Pfam PF01609 Transposase DDE domain 147 368 7.1E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_1637 68519d1e92927b06fde5867bdea0edff 458 Pfam PF13006 Insertion element 4 transposase N-terminal 35 125 3.3E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_1637 68519d1e92927b06fde5867bdea0edff 458 SUPERFAMILY SSF53098 121 437 5.76E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_3485 d2737dffd5e84f934d0a98f0ffff247e 127 Gene3D G3DSA:1.20.120.10 21 117 3.9E-8 T 17-10-2018 FORC55_3485 d2737dffd5e84f934d0a98f0ffff247e 127 Pfam PF07361 Cytochrome b562 22 117 1.2E-26 T 17-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 FORC55_3485 d2737dffd5e84f934d0a98f0ffff247e 127 SUPERFAMILY SSF47175 22 117 4.12E-28 T 17-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 FORC55_0798 f637d081f620dd1c20f327bf823fa92a 192 Pfam PF00106 short chain dehydrogenase 1 155 5.3E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0798 f637d081f620dd1c20f327bf823fa92a 192 SUPERFAMILY SSF51735 1 156 1.83E-17 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0798 f637d081f620dd1c20f327bf823fa92a 192 Gene3D G3DSA:3.40.50.720 1 185 1.4E-18 T 17-10-2018 FORC55_1442 c070e2f86e647cf10675afa9bd429a22 185 SUPERFAMILY SSF63829 32 156 1.27E-6 T 17-10-2018 FORC55_1442 c070e2f86e647cf10675afa9bd429a22 185 Pfam PF07494 Two component regulator propeller 46 68 6.2E-6 T 17-10-2018 IPR011110 Two component regulator propeller FORC55_1442 c070e2f86e647cf10675afa9bd429a22 185 Gene3D G3DSA:2.130.10.10 33 167 3.8E-19 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_0626 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Pfam PF00075 RNase H 3 142 7.3E-54 T 17-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 FORC55_0626 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Gene3D G3DSA:3.30.420.10 1 155 3.8E-60 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_0626 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 SUPERFAMILY SSF53098 3 143 4.43E-58 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_0626 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.25 T 17-10-2018 IPR022892 Ribonuclease HI GO:0004523 FORC55_1631 e88fd1cf9026fb1e1f9fd5e30e6ad823 301 Pfam PF03956 Lysine exporter LysO 112 297 4.4E-55 T 17-10-2018 IPR005642 Lysine exporter LysO FORC55_1631 e88fd1cf9026fb1e1f9fd5e30e6ad823 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 151 299 1.0E-78 T 17-10-2018 IPR005642 Lysine exporter LysO FORC55_0562 76f7682ff59280aa3c5ef74d3613e0ff 462 Gene3D G3DSA:1.20.1250.20 15 223 1.5E-11 T 17-10-2018 FORC55_0562 76f7682ff59280aa3c5ef74d3613e0ff 462 SUPERFAMILY SSF103473 14 438 1.22E-37 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_0562 76f7682ff59280aa3c5ef74d3613e0ff 462 Gene3D G3DSA:1.20.1250.20 248 446 4.2E-9 T 17-10-2018 FORC55_0562 76f7682ff59280aa3c5ef74d3613e0ff 462 Pfam PF07690 Major Facilitator Superfamily 25 289 6.0E-14 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_2378 a22e6e3af92719edf19af50021f17809 189 SUPERFAMILY SSF54523 12 99 5.96E-5 T 17-10-2018 FORC55_2378 a22e6e3af92719edf19af50021f17809 189 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2378 a22e6e3af92719edf19af50021f17809 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 8.4E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2378 a22e6e3af92719edf19af50021f17809 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 1.1E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_2019 0593329bafb788aca6f62cf0ba2e8fd4 322 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 12 302 3.6E-74 T 17-10-2018 IPR011862 Phosphate binding protein GO:0042301 FORC55_2019 0593329bafb788aca6f62cf0ba2e8fd4 322 SUPERFAMILY SSF53850 32 314 2.21E-66 T 17-10-2018 FORC55_2019 0593329bafb788aca6f62cf0ba2e8fd4 322 Pfam PF12849 PBP superfamily domain 33 289 2.5E-31 T 17-10-2018 IPR024370 PBP domain FORC55_2019 0593329bafb788aca6f62cf0ba2e8fd4 322 Gene3D G3DSA:3.40.190.10 34 305 3.4E-100 T 17-10-2018 FORC55_2019 0593329bafb788aca6f62cf0ba2e8fd4 322 Gene3D G3DSA:3.40.190.10 119 261 3.4E-100 T 17-10-2018 FORC55_0420 dc127ed2026ec96cc376bb514adf8d2b 322 SUPERFAMILY SSF56935 2 322 6.11E-16 T 17-10-2018 FORC55_3573 ac6f94e0c9ee882b26ba8613cdcdebff 442 PIRSF PIRSF006603 1 440 7.7E-88 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_3573 ac6f94e0c9ee882b26ba8613cdcdebff 442 Pfam PF01554 MatE 18 178 8.9E-22 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_3573 ac6f94e0c9ee882b26ba8613cdcdebff 442 Pfam PF01554 MatE 237 390 7.5E-16 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_3573 ac6f94e0c9ee882b26ba8613cdcdebff 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 406 4.9E-52 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_2966 7d41628c3b771a8c6d0f713ed24347bc 743 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 376 699 6.0E-154 T 17-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 FORC55_3093 35b79ef8fe03a6539d8aa3f65b57123a 172 Pfam PF13302 Acetyltransferase (GNAT) domain 7 144 3.1E-22 T 17-10-2018 IPR000182 GNAT domain FORC55_3093 35b79ef8fe03a6539d8aa3f65b57123a 172 Gene3D G3DSA:3.40.630.30 1 157 4.4E-28 T 17-10-2018 FORC55_3093 35b79ef8fe03a6539d8aa3f65b57123a 172 SUPERFAMILY SSF55729 2 165 6.07E-31 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3625 0abb12f05015e97bc167f1db87266d5e 284 SMART SM00849 37 219 9.5E-20 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_3625 0abb12f05015e97bc167f1db87266d5e 284 Gene3D G3DSA:3.60.15.10 23 252 3.9E-24 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_3625 0abb12f05015e97bc167f1db87266d5e 284 Pfam PF00753 Metallo-beta-lactamase superfamily 34 151 5.3E-6 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_3625 0abb12f05015e97bc167f1db87266d5e 284 SUPERFAMILY SSF56281 23 243 5.22E-34 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2313 918a57f541b360e97670038ad2007d1b 298 SUPERFAMILY SSF46785 3 88 1.32E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2313 918a57f541b360e97670038ad2007d1b 298 Gene3D G3DSA:1.10.10.10 2 91 2.8E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2313 918a57f541b360e97670038ad2007d1b 298 SUPERFAMILY SSF53850 89 295 7.42E-26 T 17-10-2018 FORC55_2313 918a57f541b360e97670038ad2007d1b 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.3E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2313 918a57f541b360e97670038ad2007d1b 298 Pfam PF03466 LysR substrate binding domain 88 292 1.3E-24 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2313 918a57f541b360e97670038ad2007d1b 298 Gene3D G3DSA:3.40.190.290 92 292 4.8E-33 T 17-10-2018 FORC55_3407 a188c3b8c4c0dec6633cb9198b523b7e 309 SUPERFAMILY SSF50891 188 292 2.16E-11 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily FORC55_3407 a188c3b8c4c0dec6633cb9198b523b7e 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 5 290 9.9E-85 T 17-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B FORC55_3407 a188c3b8c4c0dec6633cb9198b523b7e 309 Gene3D G3DSA:2.40.100.10 180 307 9.7E-43 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily FORC55_3407 a188c3b8c4c0dec6633cb9198b523b7e 309 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 27 289 1.6E-85 T 17-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B FORC55_3407 a188c3b8c4c0dec6633cb9198b523b7e 309 SMART SM00797 26 306 5.0E-140 T 17-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B FORC55_0961 ec3cda46a5ac71e9090dc06148c840f2 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.62 T 17-10-2018 IPR006698 Uncharacterised protein family UPF0229 FORC55_0961 ec3cda46a5ac71e9090dc06148c840f2 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 3.7E-189 T 17-10-2018 IPR006698 Uncharacterised protein family UPF0229 FORC55_1918 cc1f3d7e0972d704f42985ee3482916f 212 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 212 9.5E-37 T 17-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 FORC55_1918 cc1f3d7e0972d704f42985ee3482916f 212 Gene3D G3DSA:3.30.70.2540 1 212 4.0E-55 T 17-10-2018 FORC55_1918 cc1f3d7e0972d704f42985ee3482916f 212 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 212 3.9E-45 T 17-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 FORC55_2002 9168510bc498fc983a9140026413c68e 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 3.5E-16 T 17-10-2018 IPR003849 Preprotein translocase YajC FORC55_2002 9168510bc498fc983a9140026413c68e 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 3.5E-16 T 17-10-2018 IPR003849 Preprotein translocase YajC FORC55_2002 9168510bc498fc983a9140026413c68e 110 Pfam PF02699 Preprotein translocase subunit 22 99 1.7E-26 T 17-10-2018 IPR003849 Preprotein translocase YajC FORC55_2002 9168510bc498fc983a9140026413c68e 110 SMART SM01323 18 102 3.2E-38 T 17-10-2018 IPR003849 Preprotein translocase YajC FORC55_2002 9168510bc498fc983a9140026413c68e 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 102 1.9E-29 T 17-10-2018 IPR003849 Preprotein translocase YajC FORC55_3147 a7c4e1723869aa0fedb3ab17c2200ec8 99 PIRSF PIRSF029218 1 97 1.6E-31 T 17-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 FORC55_3147 a7c4e1723869aa0fedb3ab17c2200ec8 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 2.8E-20 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_3147 a7c4e1723869aa0fedb3ab17c2200ec8 99 Gene3D G3DSA:3.30.2310.20 1 96 3.4E-27 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily FORC55_3231 d21bfef2a4bc8ed63a478ca19c924120 317 Pfam PF02698 DUF218 domain 9 133 3.1E-14 T 17-10-2018 IPR003848 Domain of unknown function DUF218 FORC55_3498 cbc05c151a709a7a979a880584f1dc8c 167 Gene3D G3DSA:3.40.1570.10 1 167 6.1E-67 T 17-10-2018 FORC55_3498 cbc05c151a709a7a979a880584f1dc8c 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 161 5.9E-35 T 17-10-2018 IPR010413 Heme utilization carrier protein HutX-like FORC55_3498 cbc05c151a709a7a979a880584f1dc8c 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 161 1.5E-66 T 17-10-2018 IPR010413 Heme utilization carrier protein HutX-like FORC55_3498 cbc05c151a709a7a979a880584f1dc8c 167 SUPERFAMILY SSF144064 1 164 4.84E-59 T 17-10-2018 FORC55_3498 cbc05c151a709a7a979a880584f1dc8c 167 PIRSF PIRSF030840 1 167 1.9E-62 T 17-10-2018 IPR010413 Heme utilization carrier protein HutX-like FORC55_1768 7f29a1da8eda870e465ed955fd227ca0 138 SUPERFAMILY SSF54593 2 130 2.82E-36 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_1768 7f29a1da8eda870e465ed955fd227ca0 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 136 1.6E-68 T 17-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 FORC55_1768 7f29a1da8eda870e465ed955fd227ca0 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 17-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 FORC55_1768 7f29a1da8eda870e465ed955fd227ca0 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 4.3E-23 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain FORC55_1768 7f29a1da8eda870e465ed955fd227ca0 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 17-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 FORC55_1768 7f29a1da8eda870e465ed955fd227ca0 138 Gene3D G3DSA:3.10.180.10 3 136 5.7E-51 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 Gene3D G3DSA:1.10.10.10 1 92 5.5E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.7E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 SUPERFAMILY SSF46785 1 112 1.03E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 SUPERFAMILY SSF53850 89 296 9.59E-40 T 17-10-2018 FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 Gene3D G3DSA:3.40.190.10 93 290 7.7E-74 T 17-10-2018 FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 Gene3D G3DSA:3.40.190.10 163 267 7.7E-74 T 17-10-2018 FORC55_1133 ebe16246d18c8908adaef027e1b97e8a 305 Pfam PF03466 LysR substrate binding domain 89 293 5.8E-42 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_0995 dce43e8083edb6b48c121cd83466dc43 105 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 24 100 4.3E-31 T 17-10-2018 IPR011846 Cyd operon protein YbgE FORC55_0995 dce43e8083edb6b48c121cd83466dc43 105 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 12 103 3.2E-42 T 17-10-2018 IPR011846 Cyd operon protein YbgE FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 Gene3D G3DSA:2.40.37.10 43 402 2.2E-131 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 SUPERFAMILY SSF51419 47 281 3.14E-47 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 Gene3D G3DSA:3.20.20.10 49 266 2.2E-131 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 SMART SM01005 278 406 3.0E-48 T 17-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 Hamap MF_01201 Alanine racemase. 40 406 25.798 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 Pfam PF01168 Alanine racemase, N-terminal domain 47 270 7.6E-50 T 17-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 TIGRFAM TIGR00492 alr: alanine racemase 43 406 3.2E-69 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 SUPERFAMILY SSF50621 271 406 7.32E-40 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 PRINTS PR00992 Alanine racemase signature 66 82 5.2E-31 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 PRINTS PR00992 Alanine racemase signature 164 176 5.2E-31 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 PRINTS PR00992 Alanine racemase signature 332 349 5.2E-31 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 PRINTS PR00992 Alanine racemase signature 243 270 5.2E-31 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 PRINTS PR00992 Alanine racemase signature 311 326 5.2E-31 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 PRINTS PR00992 Alanine racemase signature 102 120 5.2E-31 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 PRINTS PR00992 Alanine racemase signature 200 211 5.2E-31 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 Pfam PF00842 Alanine racemase, C-terminal domain 279 405 1.6E-32 T 17-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_1482 2f9df44bb03654c22dddf27a5c4e5f60 407 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 17-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 FORC55_3610 608e37e345398156a221fe133b582ab0 481 SUPERFAMILY SSF53850 21 405 6.42E-64 T 17-10-2018 FORC55_3610 608e37e345398156a221fe133b582ab0 481 Gene3D G3DSA:3.40.190.10 129 395 2.7E-58 T 17-10-2018 FORC55_3610 608e37e345398156a221fe133b582ab0 481 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 128 145 - T 17-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 FORC55_3610 608e37e345398156a221fe133b582ab0 481 Gene3D G3DSA:3.40.190.10 39 340 2.7E-58 T 17-10-2018 FORC55_3610 608e37e345398156a221fe133b582ab0 481 Pfam PF01547 Bacterial extracellular solute-binding protein 32 318 3.7E-31 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_3070 5808fc5b3900a80e436e25edf69bf2bf 334 Gene3D G3DSA:3.50.30.60 164 334 8.4E-49 T 17-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily FORC55_3070 5808fc5b3900a80e436e25edf69bf2bf 334 Gene3D G3DSA:3.40.50.10740 1 163 1.9E-59 T 17-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal FORC55_3070 5808fc5b3900a80e436e25edf69bf2bf 334 Pfam PF02016 LD-carboxypeptidase 13 317 3.4E-71 T 17-10-2018 IPR003507 Peptidase family S66 FORC55_3070 5808fc5b3900a80e436e25edf69bf2bf 334 SUPERFAMILY SSF52317 2 168 4.44E-46 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_3070 5808fc5b3900a80e436e25edf69bf2bf 334 PIRSF PIRSF028757 1 332 1.2E-98 T 17-10-2018 IPR003507 Peptidase family S66 FORC55_3070 5808fc5b3900a80e436e25edf69bf2bf 334 SUPERFAMILY SSF141986 170 323 1.09E-40 T 17-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily FORC55_0832 f436c5fa9456be9b09f0de0ca2eef1e5 196 Gene3D G3DSA:2.40.160.20 19 196 1.7E-12 T 17-10-2018 FORC55_0832 f436c5fa9456be9b09f0de0ca2eef1e5 196 SUPERFAMILY SSF56925 20 196 3.4E-18 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel FORC55_2596 0c18411a9078380b3631aefad3c977e8 437 SUPERFAMILY SSF52540 4 196 1.69E-12 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2596 0c18411a9078380b3631aefad3c977e8 437 Pfam PF13635 Domain of unknown function (DUF4143) 221 386 3.6E-19 T 17-10-2018 IPR025420 Domain of unknown function DUF4143 FORC55_2596 0c18411a9078380b3631aefad3c977e8 437 Pfam PF13173 AAA domain 18 147 8.5E-23 T 17-10-2018 FORC55_2557 cb4f998c8b5f9d7986e83b283386fc8a 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 305 4.7E-54 T 17-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 FORC55_2557 cb4f998c8b5f9d7986e83b283386fc8a 355 Gene3D G3DSA:3.40.50.2000 4 156 4.5E-27 T 17-10-2018 FORC55_2557 cb4f998c8b5f9d7986e83b283386fc8a 355 SUPERFAMILY SSF53756 10 343 1.33E-89 T 17-10-2018 FORC55_2557 cb4f998c8b5f9d7986e83b283386fc8a 355 Gene3D G3DSA:3.40.50.2000 164 347 6.4E-42 T 17-10-2018 FORC55_1713 2056edc4a1c16f18e83706f23d1dd373 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.4E-18 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_1713 2056edc4a1c16f18e83706f23d1dd373 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.4E-18 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_1713 2056edc4a1c16f18e83706f23d1dd373 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.4E-18 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_1713 2056edc4a1c16f18e83706f23d1dd373 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.4E-18 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_1713 2056edc4a1c16f18e83706f23d1dd373 113 Gene3D G3DSA:1.10.10.10 3 88 1.8E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1713 2056edc4a1c16f18e83706f23d1dd373 113 SMART SM00418 5 83 4.2E-23 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_1713 2056edc4a1c16f18e83706f23d1dd373 113 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 7.1E-11 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 FORC55_1713 2056edc4a1c16f18e83706f23d1dd373 113 SUPERFAMILY SSF46785 5 86 1.1E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 157 169 - T 17-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 97 113 7.3E-18 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 196 210 7.3E-18 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 261 274 7.3E-18 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 Gene3D G3DSA:3.90.120.10 289 378 2.5E-96 T 17-10-2018 FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 394 412 - T 17-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 SUPERFAMILY SSF53335 96 416 7.37E-85 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 98 412 1.8E-95 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 Gene3D G3DSA:3.40.50.150 97 405 2.5E-96 T 17-10-2018 FORC55_2589 bc10e3f58f27aaca07aa3034fea73b90 420 Pfam PF00145 C-5 cytosine-specific DNA methylase 96 413 1.1E-92 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 FORC55_3365 656a0bd63a4ce12c5014b323b6330ac2 132 Gene3D G3DSA:2.40.50.200 26 132 1.1E-18 T 17-10-2018 IPR036700 Bacterial OB-fold superfamily FORC55_3365 656a0bd63a4ce12c5014b323b6330ac2 132 SUPERFAMILY SSF101756 29 131 6.67E-24 T 17-10-2018 IPR036700 Bacterial OB-fold superfamily FORC55_3365 656a0bd63a4ce12c5014b323b6330ac2 132 Pfam PF04076 Bacterial OB fold (BOF) protein 59 130 8.0E-11 T 17-10-2018 IPR005220 Bacterial OB-fold FORC55_2429 2544fc340d7923cdea65c87155a866af 234 Pfam PF13309 HTH domain 168 225 1.6E-17 T 17-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain FORC55_2429 2544fc340d7923cdea65c87155a866af 234 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 24 137 1.0E-61 T 17-10-2018 IPR013559 YheO-like FORC55_2429 2544fc340d7923cdea65c87155a866af 234 Pfam PF08348 YheO-like PAS domain 25 133 1.3E-35 T 17-10-2018 IPR013559 YheO-like FORC55_2042 f8acd2a64393619702b90f310dc7792a 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 347 8.6E-162 T 17-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 FORC55_2042 f8acd2a64393619702b90f310dc7792a 357 Pfam PF00793 DAHP synthetase I family 41 340 7.2E-105 T 17-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 FORC55_2042 f8acd2a64393619702b90f310dc7792a 357 SUPERFAMILY SSF51569 8 345 1.28E-137 T 17-10-2018 FORC55_2042 f8acd2a64393619702b90f310dc7792a 357 Gene3D G3DSA:3.20.20.70 3 348 1.3E-156 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2042 f8acd2a64393619702b90f310dc7792a 357 PIRSF PIRSF001361 1 353 2.3E-163 T 17-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 FORC55_0535 4bb6fd08763b49ef740905d4f21ba049 114 Gene3D G3DSA:2.40.50.140 6 114 3.7E-31 T 17-10-2018 FORC55_0535 4bb6fd08763b49ef740905d4f21ba049 114 Pfam PF01588 Putative tRNA binding domain 18 110 4.6E-21 T 17-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 FORC55_0535 4bb6fd08763b49ef740905d4f21ba049 114 SUPERFAMILY SSF50249 11 113 1.03E-25 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_2074 f30e4b461e309a5fd0cbf2307477514c 240 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_2074 f30e4b461e309a5fd0cbf2307477514c 240 Gene3D G3DSA:3.40.50.150 8 235 4.8E-55 T 17-10-2018 FORC55_2074 f30e4b461e309a5fd0cbf2307477514c 240 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.53 T 17-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 FORC55_2074 f30e4b461e309a5fd0cbf2307477514c 240 Pfam PF05175 Methyltransferase small domain 45 131 1.8E-17 T 17-10-2018 IPR007848 Methyltransferase small domain GO:0008168 FORC55_2074 f30e4b461e309a5fd0cbf2307477514c 240 SUPERFAMILY SSF53335 10 185 3.14E-32 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2074 f30e4b461e309a5fd0cbf2307477514c 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 4.2E-6 T 17-10-2018 FORC55_2074 f30e4b461e309a5fd0cbf2307477514c 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 4.2E-6 T 17-10-2018 FORC55_2074 f30e4b461e309a5fd0cbf2307477514c 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 4.2E-6 T 17-10-2018 FORC55_3098 957410fd1ad226168f35476ae3d068e5 115 Pfam PF11225 Protein of unknown function (DUF3024) 60 114 1.0E-21 T 17-10-2018 IPR021388 Bacteriophage 933W, L0084 FORC55_1143 19e7f8a0eec66a3f66d33294c55157b7 267 Pfam PF01226 Formate/nitrite transporter 2 262 2.3E-76 T 17-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 FORC55_1143 19e7f8a0eec66a3f66d33294c55157b7 267 Gene3D G3DSA:1.20.1080.10 14 267 2.3E-102 T 17-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 FORC55_1143 19e7f8a0eec66a3f66d33294c55157b7 267 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 12 266 2.1E-80 T 17-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 FORC55_1143 19e7f8a0eec66a3f66d33294c55157b7 267 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 154 164 - T 17-10-2018 IPR024002 Formate/nitrite transporter, conserved site FORC55_1143 19e7f8a0eec66a3f66d33294c55157b7 267 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 2 265 8.1E-112 T 17-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 FORC55_1143 19e7f8a0eec66a3f66d33294c55157b7 267 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 69 78 - T 17-10-2018 IPR024002 Formate/nitrite transporter, conserved site FORC55_0730 04f9e5bc38b03fa26a339adb724b3194 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 8.9E-80 T 17-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 FORC55_0730 04f9e5bc38b03fa26a339adb724b3194 260 Pfam PF01311 Bacterial export proteins, family 1 13 246 8.6E-57 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 FORC55_0730 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 3.7E-16 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 FORC55_0730 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.7E-16 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 FORC55_0730 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.7E-16 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 FORC55_0730 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 3.7E-16 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 SMART SM00091 20 83 3.1E-5 T 17-10-2018 IPR000014 PAS domain FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 Pfam PF13188 PAS domain 20 63 4.4E-7 T 17-10-2018 IPR000014 PAS domain FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 1.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 1.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 1.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 1.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 SUPERFAMILY SSF47384 119 190 5.1E-10 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 SMART SM00388 124 190 8.8E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 Gene3D G3DSA:3.30.565.10 192 349 6.7E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 Gene3D G3DSA:3.30.450.20 10 110 8.0E-7 T 17-10-2018 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 Pfam PF00512 His Kinase A (phospho-acceptor) domain 124 188 1.5E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 SUPERFAMILY SSF55785 6 87 6.7E-9 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 338 6.8E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 SMART SM00387 233 339 1.9E-31 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 Gene3D G3DSA:1.10.287.130 111 187 3.7E-9 T 17-10-2018 FORC55_0715 194708ecf9843d97c3663768f8f8f43c 350 SUPERFAMILY SSF55874 179 337 1.57E-36 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily FORC55_0381 a47759292e858185f357dcb2270a70cc 157 Pfam PF06271 RDD family 8 147 2.8E-22 T 17-10-2018 IPR010432 RDD FORC55_2062 f1dcec807b335557dfd238ad5a3e28fe 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 3.2E-83 T 17-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 FORC55_2062 f1dcec807b335557dfd238ad5a3e28fe 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.318 T 17-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 FORC55_2062 f1dcec807b335557dfd238ad5a3e28fe 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 17-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 FORC55_2062 f1dcec807b335557dfd238ad5a3e28fe 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 261 1.3E-91 T 17-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 FORC55_0543 901c9b8fada7e5195c6f66f5321898b1 103 Pfam PF07130 YebG protein 1 72 1.5E-31 T 17-10-2018 IPR009813 Uncharacterised protein family YebG FORC55_0543 901c9b8fada7e5195c6f66f5321898b1 103 Gene3D G3DSA:1.10.10.710 21 99 6.9E-8 T 17-10-2018 IPR038627 YebG-like superfamily FORC55_0545 d9bc1a48ddd4a6046e909aa8080a6f1c 322 Pfam PF03595 Voltage-dependent anion channel 19 308 1.8E-30 T 17-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 FORC55_0545 d9bc1a48ddd4a6046e909aa8080a6f1c 322 Gene3D G3DSA:1.50.10.150 5 318 7.3E-43 T 17-10-2018 IPR038665 Voltage-dependent anion channel superfamily FORC55_1855 0b560fd7cae77a5a2e97446fcf1993eb 372 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 370 8.0E-123 T 17-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 FORC55_1855 0b560fd7cae77a5a2e97446fcf1993eb 372 SUPERFAMILY SSF53756 2 371 1.08E-138 T 17-10-2018 FORC55_1855 0b560fd7cae77a5a2e97446fcf1993eb 372 Gene3D G3DSA:3.40.50.2000 3 369 4.4E-163 T 17-10-2018 FORC55_1855 0b560fd7cae77a5a2e97446fcf1993eb 372 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 370 5.0E-161 T 17-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 FORC55_1855 0b560fd7cae77a5a2e97446fcf1993eb 372 Gene3D G3DSA:3.40.50.2000 188 357 4.4E-163 T 17-10-2018 FORC55_1145 654120001d8db4bc954070d940d43a3c 60 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 1.0E-30 T 17-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE FORC55_1145 654120001d8db4bc954070d940d43a3c 60 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.4E-26 T 17-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE FORC55_0359 d52074be75fa53acd7c1af09a8f79bbd 267 SUPERFAMILY SSF52540 6 240 3.51E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0359 d52074be75fa53acd7c1af09a8f79bbd 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_0359 d52074be75fa53acd7c1af09a8f79bbd 267 Gene3D G3DSA:3.40.50.300 4 253 2.1E-64 T 17-10-2018 FORC55_0359 d52074be75fa53acd7c1af09a8f79bbd 267 SMART SM00382 31 227 8.7E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0359 d52074be75fa53acd7c1af09a8f79bbd 267 Pfam PF00005 ABC transporter 23 170 2.8E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3565 6c20f02ef6fafe0e3a42443a9896e742 299 Pfam PF03466 LysR substrate binding domain 88 291 1.6E-44 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3565 6c20f02ef6fafe0e3a42443a9896e742 299 SUPERFAMILY SSF53850 88 292 3.8E-45 T 17-10-2018 FORC55_3565 6c20f02ef6fafe0e3a42443a9896e742 299 Gene3D G3DSA:3.40.190.290 90 292 8.1E-64 T 17-10-2018 FORC55_3565 6c20f02ef6fafe0e3a42443a9896e742 299 Gene3D G3DSA:1.10.10.10 1 84 2.1E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3565 6c20f02ef6fafe0e3a42443a9896e742 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.2E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_3565 6c20f02ef6fafe0e3a42443a9896e742 299 SUPERFAMILY SSF46785 1 87 6.15E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0283 b5088c73d105f88d9e1a5f503b150d29 225 SUPERFAMILY SSF81901 79 191 1.96E-20 T 17-10-2018 FORC55_0283 b5088c73d105f88d9e1a5f503b150d29 225 SMART SM00671 158 193 20.0 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_0283 b5088c73d105f88d9e1a5f503b150d29 225 SMART SM00671 86 121 0.015 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_0283 b5088c73d105f88d9e1a5f503b150d29 225 SMART SM00671 122 157 2.9E-6 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_0283 b5088c73d105f88d9e1a5f503b150d29 225 Gene3D G3DSA:1.25.40.10 32 225 5.1E-25 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0283 b5088c73d105f88d9e1a5f503b150d29 225 Pfam PF08238 Sel1 repeat 163 185 240.0 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_0283 b5088c73d105f88d9e1a5f503b150d29 225 Pfam PF08238 Sel1 repeat 90 120 0.028 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_0283 b5088c73d105f88d9e1a5f503b150d29 225 Pfam PF08238 Sel1 repeat 122 157 1.8E-5 T 17-10-2018 IPR006597 Sel1-like repeat FORC55_1548 159176ec9499ec0fc14b59ed2e52a3bd 331 Pfam PF01032 FecCD transport family 25 326 4.5E-80 T 17-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 FORC55_1548 159176ec9499ec0fc14b59ed2e52a3bd 331 Gene3D G3DSA:1.10.3470.10 4 328 7.8E-94 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_1548 159176ec9499ec0fc14b59ed2e52a3bd 331 SUPERFAMILY SSF81345 7 327 8.37E-80 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_1548 159176ec9499ec0fc14b59ed2e52a3bd 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 31.441 T 17-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 FORC55_0826 c8804a4181d44d948033368e810ef8bf 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 336 1.5E-100 T 17-10-2018 IPR003770 Endolytic murein transglycosylase FORC55_0826 c8804a4181d44d948033368e810ef8bf 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 333 34.164 T 17-10-2018 IPR003770 Endolytic murein transglycosylase FORC55_0826 c8804a4181d44d948033368e810ef8bf 338 Pfam PF02618 YceG-like family 43 328 4.4E-86 T 17-10-2018 IPR003770 Endolytic murein transglycosylase FORC55_0826 c8804a4181d44d948033368e810ef8bf 338 Gene3D G3DSA:3.30.160.60 302 338 7.8E-19 T 17-10-2018 FORC55_0826 c8804a4181d44d948033368e810ef8bf 338 Gene3D G3DSA:3.30.160.60 74 110 4.6E-12 T 17-10-2018 FORC55_2407 18fb81d4e5ed0875983ba5faadacfd79 70 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 2 64 1.0E-20 T 17-10-2018 IPR014318 Phage shock protein, PspG FORC55_2407 18fb81d4e5ed0875983ba5faadacfd79 70 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 4 64 1.4E-19 T 17-10-2018 IPR014318 Phage shock protein, PspG FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 Gene3D G3DSA:3.40.50.2300 164 292 2.8E-69 T 17-10-2018 FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 SMART SM00354 6 76 3.8E-25 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.8E-15 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 SUPERFAMILY SSF53822 64 319 5.3E-59 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 Gene3D G3DSA:1.10.260.40 1 64 3.6E-16 T 17-10-2018 FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 SUPERFAMILY SSF47413 6 64 2.35E-13 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 320 1.7E-34 T 17-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 Gene3D G3DSA:3.40.50.2300 67 308 2.8E-69 T 17-10-2018 FORC55_2488 308a5e47069b55e47c7895f183d1ed88 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 17-10-2018 FORC55_1683 fa95a8edf191bfa78159be7053ea7c43 137 Gene3D G3DSA:1.10.720.30 20 79 1.2E-25 T 17-10-2018 IPR036361 SAP domain superfamily FORC55_1683 fa95a8edf191bfa78159be7053ea7c43 137 Pfam PF09905 DNA-binding protein VF530 12 74 2.4E-30 T 17-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 FORC55_0514 12a1ee6b22b1f8ce1823b03848dceb2a 183 Gene3D G3DSA:1.20.120.520 1 154 2.0E-15 T 17-10-2018 FORC55_0514 12a1ee6b22b1f8ce1823b03848dceb2a 183 Pfam PF01814 Hemerythrin HHE cation binding domain 3 135 8.6E-14 T 17-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 FORC55_3205 9d7c1a219073b08c5a8706eda595f92a 103 PIRSF PIRSF037511 1 103 7.6E-33 T 17-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 FORC55_3205 9d7c1a219073b08c5a8706eda595f92a 103 Gene3D G3DSA:3.30.780.10 23 103 1.1E-32 T 17-10-2018 FORC55_3205 9d7c1a219073b08c5a8706eda595f92a 103 Pfam PF01253 Translation initiation factor SUI1 27 95 7.8E-20 T 17-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 FORC55_3205 9d7c1a219073b08c5a8706eda595f92a 103 SUPERFAMILY SSF55159 3 99 3.53E-27 T 17-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 FORC55_3205 9d7c1a219073b08c5a8706eda595f92a 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 5.8E-41 T 17-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 Pfam PF00106 short chain dehydrogenase 13 208 7.8E-49 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 Gene3D G3DSA:3.40.50.720 1 246 1.2E-69 T 17-10-2018 FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.6E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.6E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.6E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.6E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.6E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.6E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 FORC55_1722 03d0866804f4adc09eeee6900e3c0c11 247 SUPERFAMILY SSF51735 9 242 4.31E-61 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 Pfam PF01245 Ribosomal protein L19 3 113 2.1E-51 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 17-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.2E-52 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 SUPERFAMILY SSF50104 2 115 1.0E-48 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 6.5E-42 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 6.5E-42 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 6.5E-42 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 Gene3D G3DSA:2.30.30.790 2 117 1.6E-17 T 17-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 PIRSF PIRSF002191 1 117 7.3E-52 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2252 b4d742ab9f943c6484c38abbdf0f05f1 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.25 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1543 0a970f8b6c1e2708f2445e71d9f3557b 170 Gene3D G3DSA:3.30.70.260 86 170 2.2E-11 T 17-10-2018 FORC55_1543 0a970f8b6c1e2708f2445e71d9f3557b 170 PIRSF PIRSF028103 1 170 1.4E-53 T 17-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 FORC55_1543 0a970f8b6c1e2708f2445e71d9f3557b 170 Pfam PF13740 ACT domain 4 64 3.8E-10 T 17-10-2018 FORC55_1543 0a970f8b6c1e2708f2445e71d9f3557b 170 SUPERFAMILY SSF55021 88 166 5.0E-9 T 17-10-2018 FORC55_2166 62bcd353c6636f1059b6025721d7a83e 135 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 37 127 6.0E-5 T 17-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2166 62bcd353c6636f1059b6025721d7a83e 135 PIRSF PIRSF029225 1 133 7.1E-46 T 17-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2166 62bcd353c6636f1059b6025721d7a83e 135 Gene3D G3DSA:3.40.50.10220 34 134 3.9E-28 T 17-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2166 62bcd353c6636f1059b6025721d7a83e 135 SUPERFAMILY SSF102220 30 131 1.44E-29 T 17-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2166 62bcd353c6636f1059b6025721d7a83e 135 Pfam PF03603 DNA polymerase III psi subunit 4 128 2.1E-33 T 17-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 FORC55_2016 1d5d7b6102c25260d3155ea98fa018f3 731 Gene3D G3DSA:1.10.3720.10 510 728 2.8E-21 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2016 1d5d7b6102c25260d3155ea98fa018f3 731 SUPERFAMILY SSF161098 427 667 9.0E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2016 1d5d7b6102c25260d3155ea98fa018f3 731 SUPERFAMILY SSF50969 86 397 7.06E-8 T 17-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like FORC55_2016 1d5d7b6102c25260d3155ea98fa018f3 731 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 449 725 6.1E-12 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_0773 495ac56eb63933859b8383434f1841fe 198 Gene3D G3DSA:3.10.180.10 4 198 7.3E-65 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_0773 495ac56eb63933859b8383434f1841fe 198 Pfam PF06185 YecM protein 13 196 2.8E-67 T 17-10-2018 IPR010393 Protein of unknown function DUF991 FORC55_0773 495ac56eb63933859b8383434f1841fe 198 SUPERFAMILY SSF54593 1 196 3.54E-67 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_0518 7d87da8064bf0cd5c2d5b7d90fcf02de 274 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 13 21 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 FORC55_0518 7d87da8064bf0cd5c2d5b7d90fcf02de 274 PIRSF PIRSF005902 7 269 1.6E-66 T 17-10-2018 IPR001130 TatD family GO:0016788 FORC55_0518 7d87da8064bf0cd5c2d5b7d90fcf02de 274 Pfam PF01026 TatD related DNase 14 264 8.2E-68 T 17-10-2018 IPR001130 TatD family GO:0016788 FORC55_0518 7d87da8064bf0cd5c2d5b7d90fcf02de 274 Gene3D G3DSA:3.20.20.140 10 267 5.5E-80 T 17-10-2018 FORC55_0518 7d87da8064bf0cd5c2d5b7d90fcf02de 274 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 201 217 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 FORC55_0518 7d87da8064bf0cd5c2d5b7d90fcf02de 274 SUPERFAMILY SSF51556 13 266 7.72E-74 T 17-10-2018 IPR032466 Metal-dependent hydrolase FORC55_2517 796cf71ed4600f8ae00acd8d9170c94f 136 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 10 131 2.6E-30 T 17-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 FORC55_2517 796cf71ed4600f8ae00acd8d9170c94f 136 Gene3D G3DSA:1.20.120.330 12 134 3.4E-29 T 17-10-2018 FORC55_2517 796cf71ed4600f8ae00acd8d9170c94f 136 SUPERFAMILY SSF81593 5 130 2.63E-33 T 17-10-2018 FORC55_2517 796cf71ed4600f8ae00acd8d9170c94f 136 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 11 130 3.1E-21 T 17-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 FORC55_2048 ae98f28e96a9e3edefc16bf27c1aeb64 599 SUPERFAMILY SSF51735 400 498 3.94E-8 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2048 ae98f28e96a9e3edefc16bf27c1aeb64 599 Gene3D G3DSA:1.20.1530.20 6 390 2.2E-13 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily FORC55_2048 ae98f28e96a9e3edefc16bf27c1aeb64 599 Pfam PF00999 Sodium/hydrogen exchanger family 14 387 3.6E-30 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 FORC55_2048 ae98f28e96a9e3edefc16bf27c1aeb64 599 Pfam PF02254 TrkA-N domain 400 497 1.6E-6 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 FORC55_2048 ae98f28e96a9e3edefc16bf27c1aeb64 599 Gene3D G3DSA:3.40.50.720 398 512 2.5E-10 T 17-10-2018 FORC55_2367 cc25be5aad85c310dcf3a4b32e971d55 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 3.6E-66 T 17-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 FORC55_2367 cc25be5aad85c310dcf3a4b32e971d55 481 SUPERFAMILY SSF111283 18 480 5.23E-131 T 17-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 FORC55_2367 cc25be5aad85c310dcf3a4b32e971d55 481 Gene3D G3DSA:3.30.2290.10 7 240 5.9E-16 T 17-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal FORC55_2367 cc25be5aad85c310dcf3a4b32e971d55 481 PIRSF PIRSF004919 15 481 5.0E-144 T 17-10-2018 IPR025502 TldD FORC55_3628 af9f5926103cb65c4cbcba44f5f60258 240 Pfam PF01925 Sulfite exporter TauE/SafE 12 232 2.7E-28 T 17-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 PRINTS PR00990 Ribokinase signature 173 188 3.2E-35 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 PRINTS PR00990 Ribokinase signature 217 228 3.2E-35 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 PRINTS PR00990 Ribokinase signature 33 52 3.2E-35 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 PRINTS PR00990 Ribokinase signature 6 27 3.2E-35 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 PRINTS PR00990 Ribokinase signature 105 118 3.2E-35 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 Gene3D G3DSA:3.40.1190.20 1 306 9.9E-108 T 17-10-2018 IPR029056 Ribokinase-like FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 Pfam PF00294 pfkB family carbohydrate kinase 1 294 2.7E-74 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.486 T 17-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 SUPERFAMILY SSF53613 1 302 1.26E-87 T 17-10-2018 IPR029056 Ribokinase-like FORC55_2810 b7f97c5eb5595ebf107a54c29e76d861 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 4.3E-111 T 17-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 636 8.1E-203 T 17-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 SMART SM00642 137 539 1.4E-5 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 Gene3D G3DSA:2.60.40.10 1 114 2.3E-18 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 SUPERFAMILY SSF51011 556 648 3.24E-14 T 17-10-2018 FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 Gene3D G3DSA:2.60.40.1180 555 651 5.2E-6 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 7.1E-10 T 17-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 SUPERFAMILY SSF51445 112 542 7.75E-103 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 SUPERFAMILY SSF81296 7 124 5.88E-20 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 Pfam PF00128 Alpha amylase, catalytic domain 199 250 1.7E-5 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 FORC55_3607 d3e8384d761cae796187aa0bd1e38d0b 656 Gene3D G3DSA:3.20.20.80 116 549 5.9E-145 T 17-10-2018 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 Gene3D G3DSA:3.40.50.170 1 209 2.8E-89 T 17-10-2018 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 SUPERFAMILY SSF53328 5 210 1.01E-67 T 17-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 315 36.913 T 17-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 Gene3D G3DSA:3.10.25.10 210 314 9.3E-39 T 17-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 17-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 1.4E-28 T 17-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 SUPERFAMILY SSF50486 208 310 2.67E-32 T 17-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 1.4E-108 T 17-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 FORC55_0032 ff8bad36358c98c5a201f996f0ade936 315 Pfam PF00551 Formyl transferase 6 183 8.6E-48 T 17-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 FORC55_1921 e34ae4847db9bae5aee864138c1c25bf 420 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 42 405 5.2E-103 T 17-10-2018 IPR013397 CRISPR-associated protein Csy1 FORC55_1921 e34ae4847db9bae5aee864138c1c25bf 420 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 42 366 1.1E-51 T 17-10-2018 IPR013397 CRISPR-associated protein Csy1 FORC55_2101 834b57a2c9535414a16a3c03ca31fca6 93 Pfam PF01527 Transposase 3 73 3.0E-10 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 FORC55_2101 834b57a2c9535414a16a3c03ca31fca6 93 SUPERFAMILY SSF48295 1 56 3.5E-15 T 17-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 FORC55_3594 37509d905154505b7e71920b03256a69 477 Pfam PF03600 Citrate transporter 46 421 3.5E-51 T 17-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 FORC55_0661 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.2E-116 T 17-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 FORC55_0661 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 6.8E-40 T 17-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G FORC55_0661 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 3.0E-30 T 17-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G FORC55_0661 b52daad429c6428bf861308eec9400b0 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 17-10-2018 IPR019776 Flagellar basal body rod protein, conserved site FORC55_0661 b52daad429c6428bf861308eec9400b0 262 SUPERFAMILY SSF117143 92 223 3.53E-36 T 17-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like FORC55_0661 b52daad429c6428bf861308eec9400b0 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 8.6E-24 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain FORC55_0661 b52daad429c6428bf861308eec9400b0 262 Pfam PF00460 Flagella basal body rod protein 5 35 6.9E-11 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 FORC55_1862 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-39 T 17-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 FORC55_1862 3eab78e3f44c8f18a80bea895aba2cfd 186 PIRSF PIRSF004682 1 185 5.6E-64 T 17-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 FORC55_1862 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 5.6E-37 T 17-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 FORC55_1862 3eab78e3f44c8f18a80bea895aba2cfd 186 Pfam PF13242 HAD-hyrolase-like 107 176 8.3E-13 T 17-10-2018 FORC55_1862 3eab78e3f44c8f18a80bea895aba2cfd 186 SUPERFAMILY SSF56784 4 182 1.49E-50 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_1862 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.8E-79 T 17-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 FORC55_1862 3eab78e3f44c8f18a80bea895aba2cfd 186 Gene3D G3DSA:3.40.50.1000 2 186 1.1E-61 T 17-10-2018 IPR023214 HAD superfamily FORC55_0506 4c0e653a6fa96ea1d0d73a648d2d10b8 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.5E-69 T 17-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 FORC55_0506 4c0e653a6fa96ea1d0d73a648d2d10b8 161 SUPERFAMILY SSF89562 1 158 1.57E-49 T 17-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily FORC55_0506 4c0e653a6fa96ea1d0d73a648d2d10b8 161 Pfam PF03737 Aldolase/RraA 5 152 1.8E-42 T 17-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein FORC55_0506 4c0e653a6fa96ea1d0d73a648d2d10b8 161 Gene3D G3DSA:3.50.30.40 1 161 1.5E-68 T 17-10-2018 FORC55_0269 9415ed9b6884530d9e04f0fceccd2b1c 263 SMART SM01150 3 262 8.0E-117 T 17-10-2018 IPR009770 Domain of unknown function DUF1338 FORC55_0269 9415ed9b6884530d9e04f0fceccd2b1c 263 Pfam PF07063 Domain of unknown function (DUF1338) 32 117 1.0E-19 T 17-10-2018 IPR009770 Domain of unknown function DUF1338 FORC55_0269 9415ed9b6884530d9e04f0fceccd2b1c 263 Pfam PF07063 Domain of unknown function (DUF1338) 136 261 1.3E-28 T 17-10-2018 IPR009770 Domain of unknown function DUF1338 FORC55_0269 9415ed9b6884530d9e04f0fceccd2b1c 263 Gene3D G3DSA:3.10.180.50 2 239 1.7E-93 T 17-10-2018 FORC55_1892 daee25f4baf912f2e0d3777ae710158b 231 SUPERFAMILY SSF118196 1 225 1.09E-77 T 17-10-2018 IPR036413 YaeB-like superfamily FORC55_1892 daee25f4baf912f2e0d3777ae710158b 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 17-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site FORC55_1892 daee25f4baf912f2e0d3777ae710158b 231 Gene3D G3DSA:3.30.2310.10 145 227 2.3E-21 T 17-10-2018 FORC55_1892 daee25f4baf912f2e0d3777ae710158b 231 Gene3D G3DSA:2.40.30.70 22 144 1.8E-44 T 17-10-2018 IPR036414 YaeB, N-terminal domain superfamily FORC55_1892 daee25f4baf912f2e0d3777ae710158b 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.7E-38 T 17-10-2018 IPR023370 YaeB-like, N-terminal domain FORC55_1892 daee25f4baf912f2e0d3777ae710158b 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 1.4E-47 T 17-10-2018 IPR023370 YaeB-like, N-terminal domain FORC55_2443 4254f1bd2a923d51d2fce7b23ac7d609 181 SMART SM00479 7 180 6.6E-20 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_2443 4254f1bd2a923d51d2fce7b23ac7d609 181 SUPERFAMILY SSF53098 3 180 7.01E-50 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2443 4254f1bd2a923d51d2fce7b23ac7d609 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.141 T 17-10-2018 IPR022894 Oligoribonuclease GO:0000175 FORC55_2443 4254f1bd2a923d51d2fce7b23ac7d609 181 Gene3D G3DSA:3.30.420.10 1 181 6.3E-75 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_2443 4254f1bd2a923d51d2fce7b23ac7d609 181 Pfam PF00929 Exonuclease 9 170 3.0E-36 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III FORC55_0480 59a516abaad26a0cc9d865696ce38fef 132 Gene3D G3DSA:3.90.79.10 1 132 8.8E-44 T 17-10-2018 FORC55_0480 59a516abaad26a0cc9d865696ce38fef 132 Pfam PF00293 NUDIX domain 6 125 2.0E-19 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_0480 59a516abaad26a0cc9d865696ce38fef 132 SUPERFAMILY SSF55811 2 127 4.06E-33 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_0480 59a516abaad26a0cc9d865696ce38fef 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 FORC55_0480 59a516abaad26a0cc9d865696ce38fef 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.7E-9 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 FORC55_0480 59a516abaad26a0cc9d865696ce38fef 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.7E-9 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 FORC55_0480 59a516abaad26a0cc9d865696ce38fef 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 126 2.7E-40 T 17-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 SMART SM00267 411 574 9.7E-32 T 17-10-2018 IPR000160 GGDEF domain FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 SUPERFAMILY SSF158472 364 413 9.42E-5 T 17-10-2018 FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 424 568 2.3E-27 T 17-10-2018 IPR000160 GGDEF domain FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 Gene3D G3DSA:3.30.70.270 423 587 2.3E-34 T 17-10-2018 FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 423 568 8.0E-21 T 17-10-2018 IPR000160 GGDEF domain FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 Gene3D G3DSA:1.20.1480.50 326 422 1.1E-5 T 17-10-2018 FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 SUPERFAMILY SSF141868 591 838 1.7E-82 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 SMART SM00052 584 832 2.0E-101 T 17-10-2018 IPR001633 EAL domain FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 Gene3D G3DSA:3.20.20.450 588 842 7.0E-90 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 Pfam PF00563 EAL domain 591 827 6.4E-72 T 17-10-2018 IPR001633 EAL domain FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 SUPERFAMILY SSF55073 427 568 3.45E-28 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 Gene3D G3DSA:3.30.450.20 36 227 6.4E-11 T 17-10-2018 FORC55_0136 1cf05eacdc3d69148328908a043bd51a 843 Pfam PF02743 Cache domain 38 323 2.1E-17 T 17-10-2018 IPR033479 Double Cache domain 1 FORC55_2243 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 9.8E-42 T 17-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 FORC55_2243 b86c01f2edcd9f1fbad013fe6f3a8d96 421 SUPERFAMILY SSF81648 297 411 1.0E-33 T 17-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 FORC55_2243 b86c01f2edcd9f1fbad013fe6f3a8d96 421 PIRSF PIRSF038885 1 421 3.1E-153 T 17-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 FORC55_2243 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Gene3D G3DSA:1.20.810.10 1 421 1.3E-150 T 17-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 FORC55_2243 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 2.1E-65 T 17-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 FORC55_2243 b86c01f2edcd9f1fbad013fe6f3a8d96 421 SUPERFAMILY SSF81342 6 296 2.67E-92 T 17-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 FORC55_1212 e9673bc41466ce1c080448b339972c46 377 SUPERFAMILY SSF51419 14 242 4.11E-43 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_1212 e9673bc41466ce1c080448b339972c46 377 PIRSF PIRSF038941 1 372 1.2E-129 T 17-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 FORC55_1212 e9673bc41466ce1c080448b339972c46 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 7.7E-173 T 17-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 FORC55_1212 e9673bc41466ce1c080448b339972c46 377 Gene3D G3DSA:3.20.20.10 15 242 7.1E-145 T 17-10-2018 IPR029066 PLP-binding barrel FORC55_1212 e9673bc41466ce1c080448b339972c46 377 Gene3D G3DSA:2.40.37.10 7 372 7.1E-145 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_1212 e9673bc41466ce1c080448b339972c46 377 SUPERFAMILY SSF50621 212 361 7.12E-24 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 FORC55_0869 08b0aa232a11281a83aea7d75d1f61dd 386 Pfam PF03594 Benzoate membrane transport protein 5 379 6.9E-151 T 17-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 FORC55_0869 08b0aa232a11281a83aea7d75d1f61dd 386 TIGRFAM TIGR00843 benE: benzoate transporter 9 377 1.3E-94 T 17-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 FORC55_3576 ca4256a09de5c853e4497b716b4657dc 153 SUPERFAMILY SSF69118 6 148 1.96E-35 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 FORC55_3576 ca4256a09de5c853e4497b716b4657dc 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 81 2.2E-15 T 17-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 FORC55_3576 ca4256a09de5c853e4497b716b4657dc 153 Gene3D G3DSA:1.20.1290.10 1 148 3.1E-36 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 FORC55_3576 ca4256a09de5c853e4497b716b4657dc 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 98 1.6E-13 T 17-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 FORC55_1881 ac23d1a82d59017e6e13a2576fce035a 244 SUPERFAMILY SSF55120 2 238 2.88E-62 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1881 ac23d1a82d59017e6e13a2576fce035a 244 Pfam PF00849 RNA pseudouridylate synthase 11 170 3.8E-33 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_1881 ac23d1a82d59017e6e13a2576fce035a 244 Gene3D G3DSA:3.30.2350.10 3 235 1.1E-59 T 17-10-2018 FORC55_1881 ac23d1a82d59017e6e13a2576fce035a 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_3340 e7ab02ec988ea593d2d0ba7037e7f64d 382 SUPERFAMILY SSF56796 3 380 5.76E-95 T 17-10-2018 FORC55_3340 e7ab02ec988ea593d2d0ba7037e7f64d 382 Gene3D G3DSA:1.20.1090.10 181 381 1.6E-32 T 17-10-2018 FORC55_3340 e7ab02ec988ea593d2d0ba7037e7f64d 382 Gene3D G3DSA:3.40.50.1970 1 180 4.3E-49 T 17-10-2018 FORC55_3340 e7ab02ec988ea593d2d0ba7037e7f64d 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 354 1.6E-78 T 17-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 FORC55_2392 d6d7436ba733ec49face7971eb8fb4b9 177 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.537 T 17-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 FORC55_2392 d6d7436ba733ec49face7971eb8fb4b9 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 177 2.0E-61 T 17-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 FORC55_2392 d6d7436ba733ec49face7971eb8fb4b9 177 Gene3D G3DSA:2.40.50.140 2 148 4.7E-50 T 17-10-2018 FORC55_2392 d6d7436ba733ec49face7971eb8fb4b9 177 PIRSF PIRSF002070 2 175 6.5E-38 T 17-10-2018 FORC55_2392 d6d7436ba733ec49face7971eb8fb4b9 177 Pfam PF00436 Single-strand binding protein family 6 105 5.1E-43 T 17-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 FORC55_2392 d6d7436ba733ec49face7971eb8fb4b9 177 SUPERFAMILY SSF50249 4 177 1.92E-60 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1724 ed426c7b9e3ef4355bba8928799961c1 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 42.266 T 17-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 FORC55_1724 ed426c7b9e3ef4355bba8928799961c1 145 PIRSF PIRSF006173 1 144 5.0E-65 T 17-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 FORC55_1724 ed426c7b9e3ef4355bba8928799961c1 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 4.4E-9 T 17-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein FORC55_1277 91ff3932ecaf7d45148609ec9c968a86 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 288 4.9E-11 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1277 91ff3932ecaf7d45148609ec9c968a86 293 SUPERFAMILY SSF161098 55 282 3.79E-42 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1277 91ff3932ecaf7d45148609ec9c968a86 293 Gene3D G3DSA:1.10.3720.10 51 292 7.9E-48 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0970 0565fc0c2551787ecb0887671bdf5cd9 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 3.4E-205 T 17-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 FORC55_0970 0565fc0c2551787ecb0887671bdf5cd9 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 17-10-2018 FORC55_0970 0565fc0c2551787ecb0887671bdf5cd9 758 Pfam PF01228 Glycine radical 628 739 1.6E-43 T 17-10-2018 IPR001150 Glycine radical domain GO:0003824 FORC55_0970 0565fc0c2551787ecb0887671bdf5cd9 758 SUPERFAMILY SSF51998 4 757 5.26E-290 T 17-10-2018 FORC55_0970 0565fc0c2551787ecb0887671bdf5cd9 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 17-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site FORC55_0970 0565fc0c2551787ecb0887671bdf5cd9 758 PIRSF PIRSF000379 5 758 0.0 T 17-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 FORC55_0970 0565fc0c2551787ecb0887671bdf5cd9 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 17-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 FORC55_3227 50d8cf2874f9d7775ea99a46cbcf4d3e 159 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 146 6.8E-11 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_3227 50d8cf2874f9d7775ea99a46cbcf4d3e 159 SUPERFAMILY SSF53850 44 146 5.61E-20 T 17-10-2018 FORC55_3227 50d8cf2874f9d7775ea99a46cbcf4d3e 159 Gene3D G3DSA:3.40.190.10 33 148 5.5E-42 T 17-10-2018 FORC55_2494 239e982252ad19d6733da499c8e1776a 458 PIRSF PIRSF002746 8 458 1.7E-144 T 17-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 FORC55_2494 239e982252ad19d6733da499c8e1776a 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 457 4.2E-105 T 17-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 FORC55_2494 239e982252ad19d6733da499c8e1776a 458 Pfam PF02447 GntP family permease 14 456 1.0E-117 T 17-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 FORC55_0934 05f829780827f12be7c9e6190abf0dd1 173 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 4.3E-42 T 17-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 FORC55_0934 05f829780827f12be7c9e6190abf0dd1 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.913 T 17-10-2018 IPR022920 Disulphide bond formation protein DsbB FORC55_0934 05f829780827f12be7c9e6190abf0dd1 173 Gene3D G3DSA:1.20.1550.10 3 173 2.7E-56 T 17-10-2018 IPR023380 DsbB-like superfamily FORC55_0934 05f829780827f12be7c9e6190abf0dd1 173 SUPERFAMILY SSF158442 17 162 1.44E-43 T 17-10-2018 IPR023380 DsbB-like superfamily FORC55_0234 b0e0facc00fd9de41b9e722093794155 144 SMART SM00450 40 138 1.6E-19 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_0234 b0e0facc00fd9de41b9e722093794155 144 SUPERFAMILY SSF52821 15 143 1.7E-28 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_0234 b0e0facc00fd9de41b9e722093794155 144 Pfam PF00581 Rhodanese-like domain 42 135 3.3E-16 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_0234 b0e0facc00fd9de41b9e722093794155 144 Gene3D G3DSA:3.40.250.10 22 143 1.3E-23 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_2255 750d48d0630fd2625777f2e81240fc2c 82 SUPERFAMILY SSF54565 1 77 8.63E-28 T 17-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2255 750d48d0630fd2625777f2e81240fc2c 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.2E-27 T 17-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2255 750d48d0630fd2625777f2e81240fc2c 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.891 T 17-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2255 750d48d0630fd2625777f2e81240fc2c 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 17-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2255 750d48d0630fd2625777f2e81240fc2c 82 Pfam PF00886 Ribosomal protein S16 8 68 4.8E-23 T 17-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2255 750d48d0630fd2625777f2e81240fc2c 82 Gene3D G3DSA:3.30.1320.10 1 82 1.0E-30 T 17-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2631 4232e80a30677b3b2e7d496a7fd533d0 368 SUPERFAMILY SSF111369 58 273 1.19E-38 T 17-10-2018 FORC55_2631 4232e80a30677b3b2e7d496a7fd533d0 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.8E-74 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_2631 4232e80a30677b3b2e7d496a7fd533d0 368 Gene3D G3DSA:1.10.287.470 103 162 2.6E-72 T 17-10-2018 FORC55_2631 4232e80a30677b3b2e7d496a7fd533d0 368 Gene3D G3DSA:2.40.50.100 68 196 2.6E-72 T 17-10-2018 FORC55_2631 4232e80a30677b3b2e7d496a7fd533d0 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 1.4E-26 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_2631 4232e80a30677b3b2e7d496a7fd533d0 368 Gene3D G3DSA:2.40.30.170 58 279 2.6E-72 T 17-10-2018 FORC55_2631 4232e80a30677b3b2e7d496a7fd533d0 368 Gene3D G3DSA:2.40.420.20 280 351 2.6E-72 T 17-10-2018 FORC55_0203 b2f74d63e20fd4e0b93840b1f7f08074 335 Gene3D G3DSA:3.30.540.10 7 319 1.5E-126 T 17-10-2018 FORC55_0203 b2f74d63e20fd4e0b93840b1f7f08074 335 SUPERFAMILY SSF56655 1 324 1.46E-107 T 17-10-2018 FORC55_0203 b2f74d63e20fd4e0b93840b1f7f08074 335 Gene3D G3DSA:3.40.190.90 109 276 1.5E-126 T 17-10-2018 FORC55_0203 b2f74d63e20fd4e0b93840b1f7f08074 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 5.1E-170 T 17-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 FORC55_0203 b2f74d63e20fd4e0b93840b1f7f08074 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 6.9E-130 T 17-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 FORC55_0203 b2f74d63e20fd4e0b93840b1f7f08074 335 PIRSF PIRSF004532 1 331 1.9E-135 T 17-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 FORC55_3034 17ba3806f3d0f9f92684fb9d269db385 137 Pfam PF13673 Acetyltransferase (GNAT) domain 34 125 1.5E-11 T 17-10-2018 IPR000182 GNAT domain FORC55_3034 17ba3806f3d0f9f92684fb9d269db385 137 Gene3D G3DSA:3.40.630.30 8 133 6.3E-21 T 17-10-2018 FORC55_3034 17ba3806f3d0f9f92684fb9d269db385 137 SUPERFAMILY SSF55729 28 125 2.66E-16 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 Gene3D G3DSA:3.40.30.60 363 506 1.7E-54 T 17-10-2018 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 17-10-2018 IPR025505 FHIPEP conserved site FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 7.2E-270 T 17-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 Pfam PF00771 FHIPEP family 32 687 5.1E-271 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 Gene3D G3DSA:1.10.490.80 598 695 1.2E-14 T 17-10-2018 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.9E-56 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.9E-56 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.9E-56 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.9E-56 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.9E-56 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.9E-56 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 PIRSF PIRSF005419 10 697 5.4E-255 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 FORC55_0776 9d1fc0b63bbe7775f02a12880a1e3839 697 Gene3D G3DSA:1.10.8.540 507 594 1.9E-23 T 17-10-2018 FORC55_1308 e46975a954f5f7693fdb5b303332dc48 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 2.9E-8 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_1308 e46975a954f5f7693fdb5b303332dc48 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_1308 e46975a954f5f7693fdb5b303332dc48 553 Gene3D G3DSA:3.30.70.20 181 253 5.3E-12 T 17-10-2018 FORC55_1308 e46975a954f5f7693fdb5b303332dc48 553 Gene3D G3DSA:3.30.70.20 413 484 6.1E-12 T 17-10-2018 FORC55_1308 e46975a954f5f7693fdb5b303332dc48 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_1308 e46975a954f5f7693fdb5b303332dc48 553 SUPERFAMILY SSF54862 143 523 2.93E-40 T 17-10-2018 FORC55_1308 e46975a954f5f7693fdb5b303332dc48 553 Pfam PF13187 4Fe-4S dicluster domain 419 465 1.0E-6 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_3477 0df3de8797f3c68f0e46e4cf11d0f25f 508 Pfam PF00563 EAL domain 260 491 1.3E-54 T 17-10-2018 IPR001633 EAL domain FORC55_3477 0df3de8797f3c68f0e46e4cf11d0f25f 508 SUPERFAMILY SSF141868 260 501 2.48E-67 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_3477 0df3de8797f3c68f0e46e4cf11d0f25f 508 Gene3D G3DSA:3.20.20.450 258 506 4.2E-67 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_3477 0df3de8797f3c68f0e46e4cf11d0f25f 508 SMART SM00052 252 496 7.1E-59 T 17-10-2018 IPR001633 EAL domain FORC55_1627 b5cf22563a20aa20b2a72418e7301eee 165 SUPERFAMILY SSF52172 1 143 1.2E-19 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1627 b5cf22563a20aa20b2a72418e7301eee 165 Pfam PF00072 Response regulator receiver domain 6 126 1.3E-13 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1627 b5cf22563a20aa20b2a72418e7301eee 165 Gene3D G3DSA:3.40.50.2300 5 142 2.6E-18 T 17-10-2018 FORC55_1627 b5cf22563a20aa20b2a72418e7301eee 165 SMART SM00448 4 125 2.5E-8 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0079 bd5f6e6d5ab65f69a3ed69fa952d552f 793 PIRSF PIRSF000437 4 793 0.0 T 17-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 FORC55_0079 bd5f6e6d5ab65f69a3ed69fa952d552f 793 PIRSF PIRSF500064 1 793 0.0 T 17-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 FORC55_0079 bd5f6e6d5ab65f69a3ed69fa952d552f 793 SMART SM00563 285 412 6.3E-25 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_0079 bd5f6e6d5ab65f69a3ed69fa952d552f 793 SUPERFAMILY SSF69593 268 476 3.01E-26 T 17-10-2018 FORC55_0079 bd5f6e6d5ab65f69a3ed69fa952d552f 793 Pfam PF01553 Acyltransferase 274 409 7.0E-23 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_0079 bd5f6e6d5ab65f69a3ed69fa952d552f 793 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 2 784 0.0 T 17-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 FORC55_0079 bd5f6e6d5ab65f69a3ed69fa952d552f 793 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 1 792 32.544 T 17-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 FORC55_1195 e17542a86a7e1817f7bd1dba7815b021 257 Pfam PF00563 EAL domain 26 242 9.7E-47 T 17-10-2018 IPR001633 EAL domain FORC55_1195 e17542a86a7e1817f7bd1dba7815b021 257 SMART SM00052 2 247 3.5E-23 T 17-10-2018 IPR001633 EAL domain FORC55_1195 e17542a86a7e1817f7bd1dba7815b021 257 SUPERFAMILY SSF141868 25 242 5.75E-59 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_1195 e17542a86a7e1817f7bd1dba7815b021 257 Gene3D G3DSA:3.20.20.450 10 253 1.1E-63 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_2876 a713157c1ea3165360b69c8332b302f7 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.5E-80 T 17-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 FORC55_2876 a713157c1ea3165360b69c8332b302f7 347 SUPERFAMILY SSF51412 6 336 7.46E-100 T 17-10-2018 FORC55_2876 a713157c1ea3165360b69c8332b302f7 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 17-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 FORC55_2876 a713157c1ea3165360b69c8332b302f7 347 PIRSF PIRSF000235 1 347 4.8E-194 T 17-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 FORC55_2876 a713157c1ea3165360b69c8332b302f7 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.067 T 17-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 FORC55_2876 a713157c1ea3165360b69c8332b302f7 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 7.6E-184 T 17-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 FORC55_2876 a713157c1ea3165360b69c8332b302f7 347 Gene3D G3DSA:3.20.20.70 1 345 1.2E-118 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2876 a713157c1ea3165360b69c8332b302f7 347 SMART SM01240 7 344 2.6E-139 T 17-10-2018 FORC55_3575 984585b6fe24ae13335987183d5ddaab 201 SUPERFAMILY SSF46689 155 200 1.43E-5 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3575 984585b6fe24ae13335987183d5ddaab 201 Gene3D G3DSA:1.10.10.60 104 201 2.3E-19 T 17-10-2018 FORC55_3575 984585b6fe24ae13335987183d5ddaab 201 SMART SM00342 118 200 3.3E-7 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_3575 984585b6fe24ae13335987183d5ddaab 201 Pfam PF12833 Helix-turn-helix domain 128 200 1.6E-16 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 FORC55_0034 392c1e9dd53d40165d8be11270026e96 375 SUPERFAMILY SSF54106 38 86 3.4E-7 T 17-10-2018 FORC55_0034 392c1e9dd53d40165d8be11270026e96 375 SMART SM00257 39 87 7.8E-7 T 17-10-2018 IPR018392 LysM domain FORC55_0034 392c1e9dd53d40165d8be11270026e96 375 Gene3D G3DSA:3.10.350.10 38 85 2.1E-14 T 17-10-2018 IPR036779 LysM domain superfamily FORC55_0034 392c1e9dd53d40165d8be11270026e96 375 Pfam PF01476 LysM domain 40 86 5.7E-13 T 17-10-2018 IPR018392 LysM domain FORC55_0311 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 1.9E-52 T 17-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 FORC55_0311 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 17-10-2018 FORC55_0311 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 17-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 FORC55_0311 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 17-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 FORC55_0311 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 17-10-2018 IPR018102 Ribosomal S11, conserved site FORC55_0311 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 17-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_0311 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 17-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 379 9.8E-80 T 17-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 Gene3D G3DSA:3.30.70.260 255 378 9.3E-6 T 17-10-2018 FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 PIRSF PIRSF000726 59 386 1.4E-77 T 17-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 PIRSF PIRSF000726 3 63 4.0E-22 T 17-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 Pfam PF00696 Amino acid kinase family 5 231 6.2E-54 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 Gene3D G3DSA:3.40.1160.10 4 254 2.5E-88 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 SUPERFAMILY SSF55021 320 384 5.1E-5 T 17-10-2018 FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 Gene3D G3DSA:3.30.70.260 259 318 9.3E-6 T 17-10-2018 FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 SUPERFAMILY SSF53633 6 242 5.63E-76 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily FORC55_2268 7fb7b10722cc685101644a14c60f853a 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 17-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 FORC55_2643 86043fce368748935356cf8e45d94261 409 SUPERFAMILY SSF103473 11 387 1.31E-54 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_2643 86043fce368748935356cf8e45d94261 409 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 379 8.7E-85 T 17-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 FORC55_2643 86043fce368748935356cf8e45d94261 409 Gene3D G3DSA:1.20.1720.10 17 387 1.1E-73 T 17-10-2018 FORC55_2643 86043fce368748935356cf8e45d94261 409 Pfam PF07690 Major Facilitator Superfamily 23 357 8.8E-37 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_1312 f8cb4741d99c7afb3a80788cca964d19 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_1312 f8cb4741d99c7afb3a80788cca964d19 202 SUPERFAMILY SSF54862 1 183 4.19E-48 T 17-10-2018 FORC55_1312 f8cb4741d99c7afb3a80788cca964d19 202 Gene3D G3DSA:3.30.70.20 63 120 4.9E-34 T 17-10-2018 FORC55_1312 f8cb4741d99c7afb3a80788cca964d19 202 Gene3D G3DSA:3.30.70.20 5 180 4.9E-34 T 17-10-2018 FORC55_1312 f8cb4741d99c7afb3a80788cca964d19 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 2.8E-10 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 SMART SM00028 426 459 71.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 SMART SM00028 307 340 0.14 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 SMART SM00028 341 374 210.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 Pfam PF13181 Tetratricopeptide repeat 309 340 0.07 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 Gene3D G3DSA:1.25.40.10 281 457 3.8E-21 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 Pfam PF14559 Tetratricopeptide repeat 352 415 7.0E-11 T 17-10-2018 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 483 40.135 T 17-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 Gene3D G3DSA:3.30.2010.10 71 148 9.0E-7 T 17-10-2018 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 Pfam PF01435 Peptidase family M48 70 255 2.9E-28 T 17-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 FORC55_0687 db01eeb4deff22c402cf3e6902440b14 484 SUPERFAMILY SSF48452 310 455 1.17E-20 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1922 8d6870ded3ec6dc7c71dcfdbc6e419ca 1122 Gene3D G3DSA:1.10.3210.30 95 276 2.5E-11 T 17-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily FORC55_1922 8d6870ded3ec6dc7c71dcfdbc6e419ca 1122 SUPERFAMILY SSF52540 425 878 9.52E-19 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1922 8d6870ded3ec6dc7c71dcfdbc6e419ca 1122 Pfam PF04851 Type III restriction enzyme, res subunit 401 493 5.4E-6 T 17-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 FORC55_1922 8d6870ded3ec6dc7c71dcfdbc6e419ca 1122 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1118 1.4E-280 T 17-10-2018 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type FORC55_2433 151802cb19228fce1ce292d74f829216 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 1.2E-22 T 17-10-2018 IPR019201 Protein of unknown function DUF2065 FORC55_1173 c7d329e3efdf8b2a8dc18a095c9fd847 220 SMART SM00382 28 212 9.8E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_1173 c7d329e3efdf8b2a8dc18a095c9fd847 220 SUPERFAMILY SSF52540 5 201 2.1E-51 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1173 c7d329e3efdf8b2a8dc18a095c9fd847 220 Pfam PF00005 ABC transporter 20 163 1.6E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1173 c7d329e3efdf8b2a8dc18a095c9fd847 220 Gene3D G3DSA:3.40.50.300 1 214 2.0E-51 T 17-10-2018 FORC55_1846 6b7fe48a495e717367d0e8963f2c71a9 390 Gene3D G3DSA:1.50.10.20 168 379 1.8E-6 T 17-10-2018 FORC55_1846 6b7fe48a495e717367d0e8963f2c71a9 390 SUPERFAMILY SSF48239 78 379 8.79E-21 T 17-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid FORC55_2240 6b25b759cf14dab213c54a252975c8e5 154 SUPERFAMILY SSF101738 5 111 1.11E-47 T 17-10-2018 IPR036760 SspB-like superfamily FORC55_2240 6b25b759cf14dab213c54a252975c8e5 154 PIRSF PIRSF005276 3 154 1.2E-60 T 17-10-2018 IPR007481 Stringent starvation protein B FORC55_2240 6b25b759cf14dab213c54a252975c8e5 154 Pfam PF04386 Stringent starvation protein B 9 154 8.1E-39 T 17-10-2018 IPR007481 Stringent starvation protein B FORC55_2240 6b25b759cf14dab213c54a252975c8e5 154 Gene3D G3DSA:2.30.30.220 3 130 1.5E-50 T 17-10-2018 IPR036760 SspB-like superfamily FORC55_2728 a1dfafe588a1706adff9f497e0ed785c 303 Pfam PF04018 Domain of unknown function (DUF368) 13 257 5.1E-97 T 17-10-2018 IPR007163 Protein of unknown function DUF368 FORC55_2332 205183988848911d02952ca478944937 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 2.4E-64 T 17-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 FORC55_2332 205183988848911d02952ca478944937 200 Pfam PF01725 Ham1 family 4 191 2.4E-58 T 17-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 FORC55_2332 205183988848911d02952ca478944937 200 Gene3D G3DSA:3.90.950.10 1 198 5.8E-84 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like FORC55_2332 205183988848911d02952ca478944937 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 52.234 T 17-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 FORC55_2332 205183988848911d02952ca478944937 200 SUPERFAMILY SSF52972 1 195 1.75E-76 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like FORC55_1291 94dfb94425afc7e25c568b25884db059 166 Gene3D G3DSA:3.90.1720.10 42 161 1.6E-39 T 17-10-2018 FORC55_1291 94dfb94425afc7e25c568b25884db059 166 Pfam PF00877 NlpC/P60 family 53 157 2.2E-30 T 17-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain FORC55_1291 94dfb94425afc7e25c568b25884db059 166 SUPERFAMILY SSF54001 37 159 7.85E-41 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily FORC55_1798 6eb242baecdb5fa385ba89445ed50790 284 SUPERFAMILY SSF52833 4 114 2.25E-24 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_1798 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF00085 Thioredoxin 7 108 1.0E-13 T 17-10-2018 IPR013766 Thioredoxin domain GO:0045454 FORC55_1798 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:3.40.30.10 1 111 3.4E-22 T 17-10-2018 FORC55_1798 6eb242baecdb5fa385ba89445ed50790 284 SUPERFAMILY SSF48452 111 246 1.24E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1798 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:1.25.40.10 197 284 3.8E-21 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1798 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.1E-26 T 17-10-2018 FORC55_1798 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.2E-12 T 17-10-2018 FORC55_1798 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:1.25.40.10 112 196 9.5E-23 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1379 0212f87fec0f09f5748eba4ee5b0dea9 286 SUPERFAMILY SSF161098 10 275 1.57E-54 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1379 0212f87fec0f09f5748eba4ee5b0dea9 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 2.0E-18 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1379 0212f87fec0f09f5748eba4ee5b0dea9 286 Gene3D G3DSA:1.10.3720.10 7 278 8.8E-54 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1753 a7c2971ae1bdf999491fbc0dbeb20f80 81 Gene3D G3DSA:3.10.20.30 1 81 2.3E-25 T 17-10-2018 IPR012675 Beta-grasp domain superfamily FORC55_1753 a7c2971ae1bdf999491fbc0dbeb20f80 81 SUPERFAMILY SSF54285 1 81 3.74E-23 T 17-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp FORC55_1753 a7c2971ae1bdf999491fbc0dbeb20f80 81 Pfam PF02597 ThiS family 4 81 1.1E-24 T 17-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 FORC55_1753 a7c2971ae1bdf999491fbc0dbeb20f80 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.9E-22 T 17-10-2018 FORC55_0024 1fd20a833ecac1eb73c8b6abe2c97a95 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 472 1.2E-175 T 17-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 FORC55_0024 1fd20a833ecac1eb73c8b6abe2c97a95 474 Gene3D G3DSA:2.60.40.10 358 474 7.0E-45 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_0024 1fd20a833ecac1eb73c8b6abe2c97a95 474 SUPERFAMILY SSF54862 108 351 3.35E-31 T 17-10-2018 FORC55_0024 1fd20a833ecac1eb73c8b6abe2c97a95 474 Pfam PF13746 4Fe-4S dicluster domain 223 327 1.1E-40 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_0024 1fd20a833ecac1eb73c8b6abe2c97a95 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 471 3.6E-29 T 17-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain FORC55_0024 1fd20a833ecac1eb73c8b6abe2c97a95 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_0024 1fd20a833ecac1eb73c8b6abe2c97a95 474 Pfam PF12801 4Fe-4S binding domain 98 137 4.3E-9 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_1219 6d7d1fe268bcf629290e00bd58ae804e 77 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 17-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 FORC55_1219 6d7d1fe268bcf629290e00bd58ae804e 77 Pfam PF00462 Glutaredoxin 4 60 2.0E-12 T 17-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 FORC55_1219 6d7d1fe268bcf629290e00bd58ae804e 77 Gene3D G3DSA:3.40.30.10 1 73 3.0E-15 T 17-10-2018 FORC55_1219 6d7d1fe268bcf629290e00bd58ae804e 77 SUPERFAMILY SSF52833 3 68 1.5E-13 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0890 8f963186bb5d135355274a84a1d607fe 220 Gene3D G3DSA:3.40.50.1000 6 216 3.8E-62 T 17-10-2018 IPR023214 HAD superfamily FORC55_0890 8f963186bb5d135355274a84a1d607fe 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 7.3E-72 T 17-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like FORC55_0890 8f963186bb5d135355274a84a1d607fe 220 Gene3D G3DSA:1.20.1440.100 17 90 3.8E-62 T 17-10-2018 FORC55_0890 8f963186bb5d135355274a84a1d607fe 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 8.8E-31 T 17-10-2018 FORC55_0890 8f963186bb5d135355274a84a1d607fe 220 SUPERFAMILY SSF56784 1 213 1.13E-31 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_0890 8f963186bb5d135355274a84a1d607fe 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 191 5.1E-29 T 17-10-2018 FORC55_2816 f9dd451b8bfa7675036ea2b3c7e0ceba 355 Gene3D G3DSA:3.20.20.190 25 354 1.3E-121 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 FORC55_2816 f9dd451b8bfa7675036ea2b3c7e0ceba 355 SUPERFAMILY SSF51695 27 353 8.37E-90 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 FORC55_2816 f9dd451b8bfa7675036ea2b3c7e0ceba 355 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 348 6.0E-65 T 17-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 FORC55_0448 1b9b911dd8ab23bc0cfe686a7834971e 202 SUPERFAMILY SSF52540 1 192 2.62E-39 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0448 1b9b911dd8ab23bc0cfe686a7834971e 202 Pfam PF01121 Dephospho-CoA kinase 4 180 4.4E-70 T 17-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 FORC55_0448 1b9b911dd8ab23bc0cfe686a7834971e 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 6.0E-65 T 17-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 FORC55_0448 1b9b911dd8ab23bc0cfe686a7834971e 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 26.912 T 17-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 FORC55_0448 1b9b911dd8ab23bc0cfe686a7834971e 202 Gene3D G3DSA:3.40.50.300 1 201 2.6E-66 T 17-10-2018 FORC55_3490 11e590e3a3f2ad08c8a68cb928d8d33a 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 11 237 4.9E-53 T 17-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 FORC55_3490 11e590e3a3f2ad08c8a68cb928d8d33a 238 SUPERFAMILY SSF100950 3 237 1.6E-62 T 17-10-2018 IPR037171 NagB/RpiA transferase-like FORC55_3490 11e590e3a3f2ad08c8a68cb928d8d33a 238 Gene3D G3DSA:3.40.50.1360 1 238 4.7E-95 T 17-10-2018 FORC55_3490 11e590e3a3f2ad08c8a68cb928d8d33a 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 226 2.0E-60 T 17-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 FORC55_1282 989688585693b2d61e08530fa06d18bb 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 5.3E-29 T 17-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 FORC55_1282 989688585693b2d61e08530fa06d18bb 134 Gene3D G3DSA:3.30.420.270 61 129 7.9E-12 T 17-10-2018 FORC55_1416 2d774b6513618f75dc8b76075d76b2ea 152 Gene3D G3DSA:1.10.3680.10 3 138 2.6E-17 T 17-10-2018 IPR029024 TerB-like FORC55_1416 2d774b6513618f75dc8b76075d76b2ea 152 SUPERFAMILY SSF158682 1 148 5.23E-27 T 17-10-2018 IPR029024 TerB-like FORC55_1416 2d774b6513618f75dc8b76075d76b2ea 152 Pfam PF05099 Tellurite resistance protein TerB 5 142 2.5E-38 T 17-10-2018 IPR007791 Co-chaperone DjlA, N-terminal FORC55_0594 33e0c440224c2913b8d2ec68861a26fb 156 Gene3D G3DSA:3.40.50.960 1 156 4.1E-64 T 17-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0594 33e0c440224c2913b8d2ec68861a26fb 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 6.5E-55 T 17-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0594 33e0c440224c2913b8d2ec68861a26fb 156 SUPERFAMILY SSF52121 4 154 1.27E-60 T 17-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0594 33e0c440224c2913b8d2ec68861a26fb 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.4E-57 T 17-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_0594 33e0c440224c2913b8d2ec68861a26fb 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.34 T 17-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_2344 7544405e8bdfc442a0c9978f0f4f795e 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 3.1E-129 T 17-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 FORC55_2344 7544405e8bdfc442a0c9978f0f4f795e 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 2.9E-107 T 17-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 FORC55_2344 7544405e8bdfc442a0c9978f0f4f795e 330 SUPERFAMILY SSF53659 3 326 7.52E-113 T 17-10-2018 FORC55_2344 7544405e8bdfc442a0c9978f0f4f795e 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 36.552 T 17-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 FORC55_2344 7544405e8bdfc442a0c9978f0f4f795e 330 Gene3D G3DSA:3.40.718.10 1 329 7.6E-124 T 17-10-2018 FORC55_2960 8330c4f1e5ae19c4c58d971f98bf40c9 230 SMART SM01007 7 197 6.8E-65 T 17-10-2018 IPR001303 Class II aldolase/adducin N-terminal FORC55_2960 8330c4f1e5ae19c4c58d971f98bf40c9 230 SUPERFAMILY SSF53639 2 220 1.12E-64 T 17-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily FORC55_2960 8330c4f1e5ae19c4c58d971f98bf40c9 230 Gene3D G3DSA:3.40.225.10 1 229 5.6E-56 T 17-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily FORC55_2960 8330c4f1e5ae19c4c58d971f98bf40c9 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 2.0E-43 T 17-10-2018 IPR001303 Class II aldolase/adducin N-terminal FORC55_2779 c6cec7b236ebc1e9f31823be8b998024 570 Gene3D G3DSA:3.30.2350.10 358 570 1.2E-62 T 17-10-2018 FORC55_2779 c6cec7b236ebc1e9f31823be8b998024 570 Pfam PF00849 RNA pseudouridylate synthase 376 523 3.3E-30 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2779 c6cec7b236ebc1e9f31823be8b998024 570 SUPERFAMILY SSF55120 363 567 4.64E-60 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2779 c6cec7b236ebc1e9f31823be8b998024 570 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 414 428 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2622 2c5e1a90587f7f63d2f3b4ee1332c6cc 315 Pfam PF05036 Sporulation related domain 62 132 2.8E-4 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 FORC55_1896 4f7189b65e10e2319b782b1f63a0f654 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 5.2E-21 T 17-10-2018 IPR025346 Protein of unknown function DUF4250 FORC55_0161 439bd07eece1b07377d6f5245b0b86db 165 Pfam PF04612 Type II secretion system (T2SS), protein M 6 163 9.5E-55 T 17-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 FORC55_0161 439bd07eece1b07377d6f5245b0b86db 165 SUPERFAMILY SSF103054 86 164 3.53E-23 T 17-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily FORC55_0161 439bd07eece1b07377d6f5245b0b86db 165 PIRSF PIRSF006291 2 164 2.7E-41 T 17-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 FORC55_0161 439bd07eece1b07377d6f5245b0b86db 165 Gene3D G3DSA:3.30.1360.100 86 165 3.5E-35 T 17-10-2018 FORC55_3455 4d6f68afe762bd57975f5e4b244c37a6 134 Gene3D G3DSA:2.20.25.10 1 34 3.6E-18 T 17-10-2018 FORC55_3455 4d6f68afe762bd57975f5e4b244c37a6 134 Pfam PF02566 OsmC-like protein 29 127 5.8E-17 T 17-10-2018 IPR003718 OsmC/Ohr family FORC55_3455 4d6f68afe762bd57975f5e4b244c37a6 134 SUPERFAMILY SSF82784 1 131 7.85E-40 T 17-10-2018 IPR036102 OsmC/Ohr superfamily FORC55_3455 4d6f68afe762bd57975f5e4b244c37a6 134 Gene3D G3DSA:3.30.300.20 35 134 3.9E-25 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 37 453 6.6E-137 T 17-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 Gene3D G3DSA:2.40.50.100 299 336 3.2E-15 T 17-10-2018 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 Gene3D G3DSA:1.10.287.470 234 298 3.2E-15 T 17-10-2018 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 1.0E-53 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 397 1.0E-53 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 417 432 1.0E-53 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 1.0E-53 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 432 452 1.0E-53 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 374 1.0E-53 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 338 1.0E-53 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 Pfam PF13437 HlyD family secretion protein 305 420 5.4E-20 T 17-10-2018 FORC55_1359 768a5f4c42e9709ccd4f131a357a8b80 453 Gene3D G3DSA:2.40.30.170 337 394 3.2E-15 T 17-10-2018 FORC55_2483 9410f9f2074b5a276f2585a875fa6eb1 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 17-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 FORC55_2483 9410f9f2074b5a276f2585a875fa6eb1 153 Gene3D G3DSA:2.40.50.100 75 153 1.3E-31 T 17-10-2018 FORC55_2483 9410f9f2074b5a276f2585a875fa6eb1 153 SUPERFAMILY SSF51230 78 153 5.5E-26 T 17-10-2018 IPR011053 Single hybrid motif FORC55_2483 9410f9f2074b5a276f2585a875fa6eb1 153 Pfam PF00364 Biotin-requiring enzyme 79 152 1.4E-24 T 17-10-2018 IPR000089 Biotin/lipoyl attachment FORC55_2483 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.5E-18 T 17-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 FORC55_2483 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.5E-18 T 17-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 FORC55_2483 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.5E-18 T 17-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 FORC55_2483 9410f9f2074b5a276f2585a875fa6eb1 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 4.3E-62 T 17-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 FORC55_3665 4982d778b7988d2119303f6000475950 217 SUPERFAMILY SSF64438 33 188 2.38E-45 T 17-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic FORC55_3665 4982d778b7988d2119303f6000475950 217 Gene3D G3DSA:3.30.1330.200 31 195 8.3E-48 T 17-10-2018 IPR038592 CheD-like superfamily FORC55_3665 4982d778b7988d2119303f6000475950 217 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 29 188 28.195 T 17-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 FORC55_3665 4982d778b7988d2119303f6000475950 217 Pfam PF03975 CheD chemotactic sensory transduction 87 184 2.3E-29 T 17-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 FORC55_2266 799aed8d21ffca4467cb064be3711123 86 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 86 34.98 T 17-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 FORC55_2266 799aed8d21ffca4467cb064be3711123 86 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 83 2.5E-26 T 17-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 FORC55_2266 799aed8d21ffca4467cb064be3711123 86 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 3.3E-20 T 17-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 FORC55_1670 0fe1c9784f9083258ed8a9c6e0b6d6ec 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 266 1.6E-64 T 17-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 FORC55_1670 0fe1c9784f9083258ed8a9c6e0b6d6ec 267 Pfam PF08241 Methyltransferase domain 57 149 1.8E-27 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 FORC55_1670 0fe1c9784f9083258ed8a9c6e0b6d6ec 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 32.764 T 17-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 FORC55_1670 0fe1c9784f9083258ed8a9c6e0b6d6ec 267 Gene3D G3DSA:3.40.50.150 19 215 6.5E-40 T 17-10-2018 FORC55_1670 0fe1c9784f9083258ed8a9c6e0b6d6ec 267 SUPERFAMILY SSF53335 19 247 6.84E-48 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 Pfam PF00005 ABC transporter 270 423 4.0E-24 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 SUPERFAMILY SSF52540 269 474 5.53E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 SUPERFAMILY SSF52540 5 224 2.15E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 Gene3D G3DSA:3.40.50.300 1 237 5.9E-58 T 17-10-2018 FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 SMART SM00382 278 472 4.7E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 SMART SM00382 30 219 1.4E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 Pfam PF00005 ABC transporter 21 170 1.8E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2807 ecfc913994804b52b5a337384df45dfe 500 Gene3D G3DSA:3.40.50.300 266 492 1.2E-46 T 17-10-2018 FORC55_3173 68b8ef52449bf274b0c3f4bcfaa1e805 181 SUPERFAMILY SSF81342 7 179 5.1E-36 T 17-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 FORC55_3173 68b8ef52449bf274b0c3f4bcfaa1e805 181 Pfam PF01292 Prokaryotic cytochrome b561 8 178 4.9E-30 T 17-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 FORC55_1912 c1ec6ce553817f2bdabd211cf08e6f01 119 Gene3D G3DSA:3.30.1450.10 34 114 7.1E-24 T 17-10-2018 IPR037873 BamE-like FORC55_1912 c1ec6ce553817f2bdabd211cf08e6f01 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 34.341 T 17-10-2018 IPR026592 Outer membrane protein assembly factor BamE FORC55_1912 c1ec6ce553817f2bdabd211cf08e6f01 119 Pfam PF04355 SmpA / OmlA family 35 104 1.0E-25 T 17-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 FORC55_0954 291916db61af3b6a6f65f96e7ebded93 167 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 13 155 3.3E-47 T 17-10-2018 IPR018639 Domain of unknown function DUF2062 FORC55_0571 9e80438386860550ad24cd34f530780a 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.2E-60 T 17-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 FORC55_0571 9e80438386860550ad24cd34f530780a 198 PIRSF PIRSF006102 1 198 2.9E-67 T 17-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 FORC55_0571 9e80438386860550ad24cd34f530780a 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.86 T 17-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 FORC55_0571 9e80438386860550ad24cd34f530780a 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 7.6E-107 T 17-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 FORC55_2686 3b0eb75b7a492dd002f8063a89b91aed 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 43 2.0E-15 T 17-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2686 3b0eb75b7a492dd002f8063a89b91aed 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 17-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_2686 3b0eb75b7a492dd002f8063a89b91aed 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.462 T 17-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2686 3b0eb75b7a492dd002f8063a89b91aed 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 44 8.1E-26 T 17-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_2686 3b0eb75b7a492dd002f8063a89b91aed 45 Pfam PF00468 Ribosomal protein L34 3 44 2.5E-24 T 17-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_1320 3675171a000f89e0367d99c4fc698763 277 SMART SM00316 69 132 6.4 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_1320 3675171a000f89e0367d99c4fc698763 277 SMART SM00316 3 64 21.0 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_1320 3675171a000f89e0367d99c4fc698763 277 SMART SM00316 145 207 2.3 T 17-10-2018 IPR022967 RNA-binding domain, S1 FORC55_1320 3675171a000f89e0367d99c4fc698763 277 Gene3D G3DSA:1.10.10.10 215 277 8.5E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1320 3675171a000f89e0367d99c4fc698763 277 PIRSF PIRSF012524 1 277 3.7E-107 T 17-10-2018 IPR014464 Conserved virulence factor B FORC55_1320 3675171a000f89e0367d99c4fc698763 277 Pfam PF13509 S1 domain 4 63 1.2E-22 T 17-10-2018 IPR039566 Conserved virulence factor B, S1 domain FORC55_1320 3675171a000f89e0367d99c4fc698763 277 Pfam PF13509 S1 domain 71 132 8.6E-5 T 17-10-2018 IPR039566 Conserved virulence factor B, S1 domain FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 SMART SM01086 335 429 2.1E-19 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 174 329 9.2E-43 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 SMART SM00382 49 332 1.3E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 Gene3D G3DSA:1.10.8.60 335 440 7.5E-40 T 17-10-2018 FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 SUPERFAMILY SSF52540 3 441 4.15E-96 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 4.6E-5 T 17-10-2018 IPR019489 Clp ATPase, C-terminal FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 8.5E-7 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 4.8E-221 T 17-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 FORC55_0215 03bb10d6a0a564953d3d12642ef1e7f3 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.085 T 17-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 FORC55_2552 b071080919e19ab757b95f20815f8426 247 Gene3D G3DSA:3.90.550.10 1 246 4.8E-65 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2552 b071080919e19ab757b95f20815f8426 247 PIRSF PIRSF028162 1 246 1.9E-103 T 17-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted FORC55_2552 b071080919e19ab757b95f20815f8426 247 SUPERFAMILY SSF53448 2 239 3.43E-21 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2869 bb1a21d13646c47452f8a56edddf7c88 148 Pfam PF00989 PAS fold 16 133 6.6E-6 T 17-10-2018 IPR013767 PAS fold GO:0006355 FORC55_2869 bb1a21d13646c47452f8a56edddf7c88 148 SUPERFAMILY SSF55785 9 101 4.36E-11 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_2869 bb1a21d13646c47452f8a56edddf7c88 148 Gene3D G3DSA:3.30.450.20 6 140 5.3E-30 T 17-10-2018 FORC55_2766 910c7eee7ee36006ed7c5165ec58668c 297 SUPERFAMILY SSF103481 39 139 8.11E-15 T 17-10-2018 FORC55_2766 910c7eee7ee36006ed7c5165ec58668c 297 SUPERFAMILY SSF103481 187 284 1.7E-15 T 17-10-2018 FORC55_2766 910c7eee7ee36006ed7c5165ec58668c 297 Pfam PF00892 EamA-like transporter family 151 281 2.1E-16 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_2766 910c7eee7ee36006ed7c5165ec58668c 297 Pfam PF00892 EamA-like transporter family 9 136 1.9E-18 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_1407 488b76d0b09d3aecada38e0078b17e33 468 Pfam PF07690 Major Facilitator Superfamily 22 401 1.2E-50 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_1407 488b76d0b09d3aecada38e0078b17e33 468 Gene3D G3DSA:1.20.1720.10 18 246 1.0E-46 T 17-10-2018 FORC55_1407 488b76d0b09d3aecada38e0078b17e33 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 1.6E-7 T 17-10-2018 FORC55_1407 488b76d0b09d3aecada38e0078b17e33 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 1.6E-7 T 17-10-2018 FORC55_1407 488b76d0b09d3aecada38e0078b17e33 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 1.6E-7 T 17-10-2018 FORC55_1407 488b76d0b09d3aecada38e0078b17e33 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 1.6E-7 T 17-10-2018 FORC55_1407 488b76d0b09d3aecada38e0078b17e33 468 SUPERFAMILY SSF103473 13 462 9.68E-60 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_1407 488b76d0b09d3aecada38e0078b17e33 468 Gene3D G3DSA:1.20.1250.20 255 464 4.1E-20 T 17-10-2018 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 Gene3D G3DSA:3.20.20.70 2 337 3.4E-148 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.5E-142 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 17-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 SUPERFAMILY SSF51569 7 335 2.49E-145 T 17-10-2018 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 SMART SM01004 9 333 8.4E-246 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 5.5E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 5.5E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 5.5E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 5.5E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 5.5E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 5.5E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_0087 22d0fad2c374604d81bb4219a914193e 347 PIRSF PIRSF001415 2 336 2.5E-152 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 FORC55_2526 145549e7a9cfd6a489f6be4d7ae413b4 261 Pfam PF00977 Histidine biosynthesis protein 5 237 4.5E-58 T 17-10-2018 IPR006062 Histidine biosynthesis GO:0000105 FORC55_2526 145549e7a9cfd6a489f6be4d7ae413b4 261 Gene3D G3DSA:3.20.20.70 1 243 8.0E-71 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2526 145549e7a9cfd6a489f6be4d7ae413b4 261 SUPERFAMILY SSF51366 1 236 5.72E-55 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 FORC55_3150 29a147e2a4caf862e9148755f9b5a922 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 3.4E-182 T 17-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 FORC55_3150 29a147e2a4caf862e9148755f9b5a922 706 Gene3D G3DSA:3.20.70.20 121 687 5.6E-233 T 17-10-2018 FORC55_3150 29a147e2a4caf862e9148755f9b5a922 706 SUPERFAMILY SSF51998 121 687 2.75E-195 T 17-10-2018 FORC55_3150 29a147e2a4caf862e9148755f9b5a922 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.3E-198 T 17-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 FORC55_3150 29a147e2a4caf862e9148755f9b5a922 706 Pfam PF03477 ATP cone domain 4 89 1.4E-21 T 17-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 FORC55_3150 29a147e2a4caf862e9148755f9b5a922 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 17-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site FORC55_3002 b5d87c3b3b8be3324e3025763dbefbea 73 Pfam PF12493 Protein of unknown function (DUF3709) 30 62 9.8E-17 T 17-10-2018 IPR022178 Protein of unknown function DUF3709 FORC55_3084 b5d87c3b3b8be3324e3025763dbefbea 73 Pfam PF12493 Protein of unknown function (DUF3709) 30 62 9.8E-17 T 17-10-2018 IPR022178 Protein of unknown function DUF3709 FORC55_3082 b5d87c3b3b8be3324e3025763dbefbea 73 Pfam PF12493 Protein of unknown function (DUF3709) 30 62 9.8E-17 T 17-10-2018 IPR022178 Protein of unknown function DUF3709 FORC55_0491 b133d36a67a1590ca3e5276e98639d75 286 Gene3D G3DSA:1.10.10.10 4 68 2.3E-13 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0491 b133d36a67a1590ca3e5276e98639d75 286 SUPERFAMILY SSF46785 4 85 7.17E-12 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0491 b133d36a67a1590ca3e5276e98639d75 286 Gene3D G3DSA:3.40.190.290 90 280 9.1E-9 T 17-10-2018 FORC55_0491 b133d36a67a1590ca3e5276e98639d75 286 Pfam PF03466 LysR substrate binding domain 90 276 7.9E-18 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_0491 b133d36a67a1590ca3e5276e98639d75 286 SUPERFAMILY SSF53850 90 280 6.7E-19 T 17-10-2018 FORC55_0491 b133d36a67a1590ca3e5276e98639d75 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.6E-13 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2393 09f3c744723396849ea50bb51be271e6 214 SMART SM00421 152 209 7.8E-20 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2393 09f3c744723396849ea50bb51be271e6 214 Gene3D G3DSA:1.10.10.10 145 214 2.5E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2393 09f3c744723396849ea50bb51be271e6 214 Gene3D G3DSA:3.40.50.2300 12 143 3.4E-20 T 17-10-2018 FORC55_2393 09f3c744723396849ea50bb51be271e6 214 SUPERFAMILY SSF46894 140 211 7.82E-20 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_2393 09f3c744723396849ea50bb51be271e6 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 3.6E-20 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2393 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.4E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2393 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.4E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2393 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.4E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 Gene3D G3DSA:2.40.50.140 1 65 9.2E-26 T 17-10-2018 FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.4E-27 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 17-10-2018 IPR019844 Cold-shock conserved site FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 SMART SM00357 3 67 4.2E-26 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 SUPERFAMILY SSF50249 1 67 3.21E-23 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-14 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-14 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-14 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 PIRSF PIRSF002599 1 73 2.3E-22 T 17-10-2018 IPR012156 Cold shock, CspA GO:0003676 FORC55_1641 9e856c6f65065d419c9b7fcc7d90e065 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.2E-43 T 17-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 FORC55_0524 4e38b09b87cdfca40b3e7e9f37902a29 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-119 T 17-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 FORC55_0524 4e38b09b87cdfca40b3e7e9f37902a29 241 Pfam PF01048 Phosphorylase superfamily 15 222 1.5E-40 T 17-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 FORC55_0524 4e38b09b87cdfca40b3e7e9f37902a29 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.848 T 17-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 FORC55_0524 4e38b09b87cdfca40b3e7e9f37902a29 241 SUPERFAMILY SSF53167 3 235 1.7E-94 T 17-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 FORC55_0524 4e38b09b87cdfca40b3e7e9f37902a29 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 17-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 FORC55_0524 4e38b09b87cdfca40b3e7e9f37902a29 241 Gene3D G3DSA:3.40.50.1580 1 239 5.5E-79 T 17-10-2018 FORC55_3522 467578398cc8c2433e93d1e96e8b5b06 90 SUPERFAMILY SSF54403 5 56 2.3E-5 T 17-10-2018 FORC55_2134 d9702f404bf6dd419c3f9dc842dd78a4 95 SUPERFAMILY SSF47162 6 88 1.83E-5 T 17-10-2018 FORC55_2833 8afa74ffc96db4090e526f3291cc326c 92 PIRSF PIRSF028784 1 92 6.1E-33 T 17-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 FORC55_2833 8afa74ffc96db4090e526f3291cc326c 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 2.2E-18 T 17-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 FORC55_0375 4b3f6e7dbd2c3f936d54c08a00a60d67 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 230 246 - T 17-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site FORC55_0375 4b3f6e7dbd2c3f936d54c08a00a60d67 325 SUPERFAMILY SSF51735 108 295 8.8E-53 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0375 4b3f6e7dbd2c3f936d54c08a00a60d67 325 SUPERFAMILY SSF52283 36 127 9.26E-30 T 17-10-2018 FORC55_0375 4b3f6e7dbd2c3f936d54c08a00a60d67 325 Gene3D G3DSA:3.40.50.720 34 322 1.2E-110 T 17-10-2018 FORC55_0375 4b3f6e7dbd2c3f936d54c08a00a60d67 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 294 3.7E-56 T 17-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 FORC55_0375 4b3f6e7dbd2c3f936d54c08a00a60d67 325 Gene3D G3DSA:3.40.50.720 104 293 1.2E-110 T 17-10-2018 FORC55_0375 4b3f6e7dbd2c3f936d54c08a00a60d67 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 325 1.7E-22 T 17-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 FORC55_0375 4b3f6e7dbd2c3f936d54c08a00a60d67 325 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 17-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site FORC55_2442 f107fdf373581f59367582fec17f5e14 369 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site FORC55_2442 f107fdf373581f59367582fec17f5e14 369 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 51.004 T 17-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 FORC55_2442 f107fdf373581f59367582fec17f5e14 369 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 9.4E-152 T 17-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 FORC55_2442 f107fdf373581f59367582fec17f5e14 369 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 1.9E-23 T 17-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 FORC55_2442 f107fdf373581f59367582fec17f5e14 369 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 9.4E-20 T 17-10-2018 FORC55_2442 f107fdf373581f59367582fec17f5e14 369 SUPERFAMILY SSF54862 165 311 5.02E-19 T 17-10-2018 FORC55_0735 bae4e0b244875c51e4f2ac0f1d30a75c 207 Pfam PF03458 UPF0126 domain 5 79 2.9E-20 T 17-10-2018 IPR005115 Uncharacterised domain UPF0126 FORC55_0735 bae4e0b244875c51e4f2ac0f1d30a75c 207 Pfam PF03458 UPF0126 domain 92 163 2.2E-21 T 17-10-2018 IPR005115 Uncharacterised domain UPF0126 FORC55_1864 fd20164ccb13a959945131791d1675cb 225 Gene3D G3DSA:1.10.3720.10 12 225 1.1E-52 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1864 fd20164ccb13a959945131791d1675cb 225 SUPERFAMILY SSF161098 15 210 2.62E-48 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1864 fd20164ccb13a959945131791d1675cb 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 2.1E-23 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3371 44264056d77693c1f070db424688b48f 101 Gene3D G3DSA:3.40.1440.10 5 99 2.0E-29 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 FORC55_3371 44264056d77693c1f070db424688b48f 101 Pfam PF01541 GIY-YIG catalytic domain 11 83 4.7E-15 T 17-10-2018 IPR000305 GIY-YIG endonuclease FORC55_3371 44264056d77693c1f070db424688b48f 101 SUPERFAMILY SSF82771 11 81 1.05E-12 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 FORC55_3499 358a21fd176c7d884bb6af69257564fc 453 SUPERFAMILY SSF102114 62 438 3.79E-82 T 17-10-2018 FORC55_3499 358a21fd176c7d884bb6af69257564fc 453 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 22 441 3.2E-183 T 17-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW FORC55_3499 358a21fd176c7d884bb6af69257564fc 453 SMART SM00729 61 284 1.0E-37 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 FORC55_3499 358a21fd176c7d884bb6af69257564fc 453 Pfam PF04055 Radical SAM superfamily 66 236 7.5E-14 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 FORC55_3499 358a21fd176c7d884bb6af69257564fc 453 Gene3D G3DSA:3.80.30.20 29 363 8.1E-74 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe FORC55_2857 19fba83722dc9a9273037b58f86d75d4 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 6.2E-137 T 17-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 FORC55_2857 19fba83722dc9a9273037b58f86d75d4 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.0E-70 T 17-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 FORC55_2857 19fba83722dc9a9273037b58f86d75d4 402 Pfam PF07670 Nucleoside recognition 90 185 6.7E-7 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 FORC55_2857 19fba83722dc9a9273037b58f86d75d4 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.1E-23 T 17-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 FORC55_2239 7eff17bb24e62aa7bed3999623ccab96 189 SMART SM00749 50 113 15.0 T 17-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria FORC55_2239 7eff17bb24e62aa7bed3999623ccab96 189 SMART SM00749 127 189 0.0016 T 17-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria FORC55_2239 7eff17bb24e62aa7bed3999623ccab96 189 Pfam PF04972 BON domain 46 112 7.2E-10 T 17-10-2018 IPR007055 BON domain FORC55_2239 7eff17bb24e62aa7bed3999623ccab96 189 Pfam PF04972 BON domain 122 188 5.9E-16 T 17-10-2018 IPR007055 BON domain FORC55_2149 1f566e98b4781ec6dbf6b815b420a289 216 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 128 173 3.3E-14 T 17-10-2018 IPR014118 Type IV conjugative transfer system protein TraV FORC55_1519 28b84cc090aba59ea05006294383136e 372 PIRSF PIRSF039026 15 372 1.2E-143 T 17-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like FORC55_1519 28b84cc090aba59ea05006294383136e 372 Gene3D G3DSA:3.40.190.10 166 337 5.3E-116 T 17-10-2018 FORC55_1519 28b84cc090aba59ea05006294383136e 372 Gene3D G3DSA:3.40.190.170 49 358 5.3E-116 T 17-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily FORC55_1519 28b84cc090aba59ea05006294383136e 372 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 50 337 8.7E-74 T 17-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 FORC55_3470 d995ba85707a950c413bcac45ca25116 217 Gene3D G3DSA:2.40.160.20 22 217 3.0E-78 T 17-10-2018 FORC55_3470 d995ba85707a950c413bcac45ca25116 217 Pfam PF03922 OmpW family 23 217 1.2E-75 T 17-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 FORC55_3470 d995ba85707a950c413bcac45ca25116 217 SUPERFAMILY SSF56925 23 217 6.54E-32 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel FORC55_3660 055b631da9ef0e184d5842aa9f2bb3c6 556 SUPERFAMILY SSF63848 279 310 2.88E-5 T 17-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 FORC55_3660 055b631da9ef0e184d5842aa9f2bb3c6 556 Pfam PF03961 Flagellar Assembly Protein A 81 543 6.3E-121 T 17-10-2018 IPR005646 Flagellar assembly protein A FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 5.1E-127 T 17-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 Pfam PF01578 Cytochrome C assembly protein 89 297 1.5E-55 T 17-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.8E-94 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.8E-94 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.8E-94 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.8E-94 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.8E-94 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.8E-94 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.8E-94 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.8E-94 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 9.5E-61 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 9.5E-61 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 9.5E-61 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 9.5E-61 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 9.5E-61 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 9.5E-61 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 9.5E-61 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_0793 1961cb2ab713dbafb62f02856a0f4f64 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.8E-260 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 FORC55_1439 03a1e77fc1f01567a0fdfed7218f10ae 94 Gene3D G3DSA:3.30.70.100 4 94 3.2E-32 T 17-10-2018 FORC55_1439 03a1e77fc1f01567a0fdfed7218f10ae 94 SUPERFAMILY SSF54975 3 93 3.92E-26 T 17-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 FORC55_1439 03a1e77fc1f01567a0fdfed7218f10ae 94 ProSitePatterns PS00151 Acylphosphatase signature 2. 37 53 - T 17-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 FORC55_1439 03a1e77fc1f01567a0fdfed7218f10ae 94 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 17-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 FORC55_1439 03a1e77fc1f01567a0fdfed7218f10ae 94 Pfam PF00708 Acylphosphatase 10 93 9.7E-24 T 17-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 FORC55_0666 c184a877232dd7ce2a92bf828c975006 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 1.7E-109 T 17-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 FORC55_0666 c184a877232dd7ce2a92bf828c975006 397 Gene3D G3DSA:1.20.1330.10 42 214 1.0E-32 T 17-10-2018 FORC55_0666 c184a877232dd7ce2a92bf828c975006 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.5E-8 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0666 c184a877232dd7ce2a92bf828c975006 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 319 397 4.8E-5 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 FORC55_0666 c184a877232dd7ce2a92bf828c975006 397 SUPERFAMILY SSF64518 1 397 5.49E-63 T 17-10-2018 FORC55_0666 c184a877232dd7ce2a92bf828c975006 397 Gene3D G3DSA:1.20.1330.10 263 373 2.9E-9 T 17-10-2018 FORC55_3444 42a8d5e57e8b8dafa883c08772c6e68a 109 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 107 1.0E-31 T 17-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 FORC55_3444 42a8d5e57e8b8dafa883c08772c6e68a 109 Gene3D G3DSA:3.30.1360.20 15 109 1.9E-33 T 17-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 FORC55_3444 42a8d5e57e8b8dafa883c08772c6e68a 109 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 22.23 T 17-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 FORC55_3444 42a8d5e57e8b8dafa883c08772c6e68a 109 SUPERFAMILY SSF55248 16 108 5.89E-34 T 17-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 FORC55_1558 bef44942e167da8639d4c802e46be04d 224 Pfam PF04172 LrgB-like family 6 218 5.6E-74 T 17-10-2018 IPR007300 CidB/LrgB family FORC55_0953 04285669a67179347057e296bcc8b01a 414 Pfam PF02687 FtsX-like permease family 301 407 4.7E-13 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 FORC55_0953 04285669a67179347057e296bcc8b01a 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 7.3E-210 T 17-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 FORC55_0953 04285669a67179347057e296bcc8b01a 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 5.9E-158 T 17-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 FORC55_0953 04285669a67179347057e296bcc8b01a 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 7.7E-15 T 17-10-2018 IPR025857 MacB-like periplasmic core domain FORC55_0901 219b9cafb970f1c56febadc6811e6aa1 453 PIRSF PIRSF006066 1 447 4.3E-136 T 17-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 FORC55_0901 219b9cafb970f1c56febadc6811e6aa1 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.8E-85 T 17-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 FORC55_0901 219b9cafb970f1c56febadc6811e6aa1 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 7.4E-116 T 17-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 255 1.7E-19 T 17-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 Gene3D G3DSA:3.20.20.80 257 634 1.7E-134 T 17-10-2018 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 SUPERFAMILY SSF55545 126 257 1.02E-23 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 Gene3D G3DSA:3.30.379.10 131 256 1.1E-21 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 351 368 9.0E-51 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 9.0E-51 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 587 604 9.0E-51 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 585 9.0E-51 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 400 418 9.0E-51 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 281 302 9.0E-51 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 9.0E-51 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 422 435 9.0E-51 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 SUPERFAMILY SSF51445 258 618 1.15E-126 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily FORC55_2208 57a175e8141273a2b28d4f7edb1fdf96 637 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 258 605 1.1E-116 T 17-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 FORC55_3649 84723eb879ffc16bc48d8efb815b9e2a 232 SUPERFAMILY SSF53720 10 179 4.19E-11 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 FORC55_3649 84723eb879ffc16bc48d8efb815b9e2a 232 Gene3D G3DSA:3.40.605.10 4 222 5.2E-9 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.357 T 17-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.3E-41 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.3E-41 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.3E-41 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.3E-41 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 6.8E-17 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 Gene3D G3DSA:1.20.5.1030 67 122 9.9E-17 T 17-10-2018 IPR038379 SecE superfamily FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 17-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_2462 997466a7aeda660ab4d5fdb4574c7fa5 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 6.8E-20 T 17-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 FORC55_2710 be725c8bba80fd5812206ad0f9be1707 341 Pfam PF01757 Acyltransferase family 8 322 1.4E-26 T 17-10-2018 IPR002656 Acyltransferase 3 GO:0016747 FORC55_2655 d54489ade848ce71cb9f78d66f1553ea 257 Gene3D G3DSA:3.40.50.300 1 255 1.9E-77 T 17-10-2018 FORC55_2655 d54489ade848ce71cb9f78d66f1553ea 257 SUPERFAMILY SSF52540 2 253 4.37E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2655 d54489ade848ce71cb9f78d66f1553ea 257 Pfam PF13614 AAA domain 2 178 1.9E-62 T 17-10-2018 IPR025669 AAA domain FORC55_2655 d54489ade848ce71cb9f78d66f1553ea 257 PIRSF PIRSF009320 2 89 2.8E-13 T 17-10-2018 FORC55_2655 d54489ade848ce71cb9f78d66f1553ea 257 PIRSF PIRSF009320 86 253 4.2E-9 T 17-10-2018 FORC55_1175 268f3f18e85fa291f63321fe6cba963d 382 SUPERFAMILY SSF53850 31 377 9.26E-40 T 17-10-2018 FORC55_1175 268f3f18e85fa291f63321fe6cba963d 382 Gene3D G3DSA:3.40.190.10 151 295 4.8E-19 T 17-10-2018 FORC55_1175 268f3f18e85fa291f63321fe6cba963d 382 PIRSF PIRSF029172 1 380 7.3E-178 T 17-10-2018 IPR027020 Protein ynjB FORC55_1175 268f3f18e85fa291f63321fe6cba963d 382 Pfam PF13416 Bacterial extracellular solute-binding protein 57 326 1.2E-22 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein FORC55_1175 268f3f18e85fa291f63321fe6cba963d 382 Gene3D G3DSA:3.40.190.10 67 327 4.8E-19 T 17-10-2018 FORC55_1792 dea3b2cda873b6dee541a64b214ada46 282 SUPERFAMILY SSF46894 6 109 1.02E-18 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_1792 dea3b2cda873b6dee541a64b214ada46 282 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 107 2.0E-20 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_1792 dea3b2cda873b6dee541a64b214ada46 282 Gene3D G3DSA:1.10.10.10 5 107 9.6E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1792 dea3b2cda873b6dee541a64b214ada46 282 SMART SM00862 30 107 3.0E-18 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_3536 a53cd9aafdb41290f2b62dc254f8ab9c 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 6.3E-30 T 17-10-2018 IPR009778 Modulator of Rho-dependent transcription termination FORC55_3536 a53cd9aafdb41290f2b62dc254f8ab9c 81 Gene3D G3DSA:2.30.30.400 2 80 2.1E-16 T 17-10-2018 IPR038626 Rof-like superfamily FORC55_3536 a53cd9aafdb41290f2b62dc254f8ab9c 81 SUPERFAMILY SSF101744 1 80 3.92E-23 T 17-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 Gene3D G3DSA:3.40.50.10750 524 677 1.8E-137 T 17-10-2018 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 SUPERFAMILY SSF53659 387 704 3.17E-96 T 17-10-2018 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 PIRSF PIRSF006107 1 709 0.0 T 17-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 Gene3D G3DSA:3.40.50.300 4 224 1.5E-12 T 17-10-2018 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 Pfam PF07085 DRTGG domain 228 339 1.1E-27 T 17-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 Pfam PF13500 AAA domain 1 224 3.7E-47 T 17-10-2018 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 SUPERFAMILY SSF52540 2 235 7.97E-28 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1686 7183a4110459b989d1ed31c338a93323 709 SUPERFAMILY SSF75138 224 348 1.16E-23 T 17-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily FORC55_1686 7183a4110459b989d1ed31c338a93323 709 Pfam PF01515 Phosphate acetyl/butaryl transferase 386 701 8.4E-130 T 17-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 Gene3D G3DSA:3.40.1390.20 225 360 3.7E-13 T 17-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily FORC55_1686 7183a4110459b989d1ed31c338a93323 709 Gene3D G3DSA:3.40.50.10950 393 704 1.8E-137 T 17-10-2018 FORC55_1686 7183a4110459b989d1ed31c338a93323 709 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 401 701 1.6E-137 T 17-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 FORC55_2794 d5ca0866b187e7b5901f8b036af04da9 218 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 34 218 5.5E-73 T 17-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 FORC55_2794 d5ca0866b187e7b5901f8b036af04da9 218 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 37 218 6.2E-57 T 17-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 FORC55_0077 9b21c167406b0522f4bd31be546f6525 270 Pfam PF04072 Leucine carboxyl methyltransferase 70 128 5.6E-5 T 17-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 FORC55_0077 9b21c167406b0522f4bd31be546f6525 270 SUPERFAMILY SSF53335 18 252 8.31E-35 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0077 9b21c167406b0522f4bd31be546f6525 270 PIRSF PIRSF028177 3 270 1.1E-93 T 17-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 FORC55_0077 9b21c167406b0522f4bd31be546f6525 270 Gene3D G3DSA:3.40.50.150 5 234 2.8E-20 T 17-10-2018 FORC55_2411 f92045c19c0682a6c0916c7fe11cfb59 392 Gene3D G3DSA:3.60.15.10 78 363 5.4E-74 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2411 f92045c19c0682a6c0916c7fe11cfb59 392 Pfam PF12706 Beta-lactamase superfamily domain 113 314 2.9E-41 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_2411 f92045c19c0682a6c0916c7fe11cfb59 392 SUPERFAMILY SSF56281 70 329 6.6E-33 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_1004 614b047446d9b6972792b3afef1d8c0a 190 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 179 2.4E-41 T 17-10-2018 IPR011978 Uncharacterised protein family UPF0149 FORC55_1004 614b047446d9b6972792b3afef1d8c0a 190 SUPERFAMILY SSF101327 2 177 2.62E-34 T 17-10-2018 IPR036255 YgfB-like superfamily FORC55_1004 614b047446d9b6972792b3afef1d8c0a 190 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 2 175 6.3E-41 T 17-10-2018 IPR011978 Uncharacterised protein family UPF0149 FORC55_3408 1b2c03a0ca5f3f77f8bab9997c7bcdc0 477 Gene3D G3DSA:3.50.50.60 4 163 9.8E-9 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3408 1b2c03a0ca5f3f77f8bab9997c7bcdc0 477 SUPERFAMILY SSF51905 5 305 1.26E-20 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily FORC55_3408 1b2c03a0ca5f3f77f8bab9997c7bcdc0 477 Pfam PF01266 FAD dependent oxidoreductase 10 370 4.8E-13 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 FORC55_2233 1d832f8e576a1a4436238dd4980fc340 177 Gene3D G3DSA:3.40.50.2020 1 176 1.1E-65 T 17-10-2018 FORC55_2233 1d832f8e576a1a4436238dd4980fc340 177 SUPERFAMILY SSF53271 3 174 1.84E-55 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like FORC55_2233 1d832f8e576a1a4436238dd4980fc340 177 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.0E-75 T 17-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 FORC55_2233 1d832f8e576a1a4436238dd4980fc340 177 Pfam PF00156 Phosphoribosyl transferase domain 12 159 4.0E-28 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 FORC55_2172 ccf4b601e4bd6ba3eb40acccdeeb5901 425 TIGRFAM TIGR00797 matE: MATE efflux family protein 3 391 8.4E-47 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_2172 ccf4b601e4bd6ba3eb40acccdeeb5901 425 PIRSF PIRSF006603 1 423 1.4E-60 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_2172 ccf4b601e4bd6ba3eb40acccdeeb5901 425 Pfam PF01554 MatE 227 379 1.8E-11 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_2172 ccf4b601e4bd6ba3eb40acccdeeb5901 425 Pfam PF01554 MatE 5 157 7.2E-21 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 Gene3D G3DSA:3.40.710.10 11 267 4.5E-88 T 17-10-2018 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 269 359 4.5E-25 T 17-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 Gene3D G3DSA:2.60.410.10 269 359 1.5E-25 T 17-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 108 125 5.3E-18 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 148 5.3E-18 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 52 63 5.3E-18 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 SUPERFAMILY SSF56601 2 269 1.0E-82 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 SUPERFAMILY SSF69189 269 361 2.55E-23 T 17-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 19 249 2.8E-86 T 17-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 FORC55_2980 d1f3ae1ac33221d0951ced2d3600045d 378 SMART SM00936 269 359 8.7E-32 T 17-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 236 1.2E-12 T 17-10-2018 IPR000014 PAS domain FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 Gene3D G3DSA:3.20.20.450 412 670 6.9E-73 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 SUPERFAMILY SSF54631 699 817 1.87E-9 T 17-10-2018 FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 Gene3D G3DSA:3.30.450.20 125 280 3.9E-20 T 17-10-2018 FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 SMART SM00091 126 192 2.1E-4 T 17-10-2018 IPR000014 PAS domain FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 SUPERFAMILY SSF55785 136 235 1.4E-17 T 17-10-2018 IPR035965 PAS domain superfamily FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 SMART SM00052 414 661 4.0E-67 T 17-10-2018 IPR001633 EAL domain FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 SUPERFAMILY SSF141868 420 664 6.15E-70 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 Pfam PF00563 EAL domain 422 656 8.6E-64 T 17-10-2018 IPR001633 EAL domain FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 Pfam PF13426 PAS domain 137 236 1.7E-8 T 17-10-2018 IPR000014 PAS domain FORC55_1129 0da16d421b9e09f5b8001144304df23e 818 Gene3D G3DSA:3.10.580.10 697 818 5.2E-8 T 17-10-2018 FORC55_0897 875d3419dae5a13348d4d4d4ce8ad9f9 153 SUPERFAMILY SSF56524 32 151 1.44E-9 T 17-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 FORC55_2195 3875801882e51fb1b69821f1d2dcbd0b 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 277 3.0E-22 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_2195 3875801882e51fb1b69821f1d2dcbd0b 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 358 2.2E-44 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_2195 3875801882e51fb1b69821f1d2dcbd0b 366 Gene3D G3DSA:2.40.30.170 71 289 1.4E-47 T 17-10-2018 FORC55_2195 3875801882e51fb1b69821f1d2dcbd0b 366 Gene3D G3DSA:2.40.50.100 81 209 1.4E-47 T 17-10-2018 FORC55_2195 3875801882e51fb1b69821f1d2dcbd0b 366 Gene3D G3DSA:2.40.420.20 290 357 1.4E-47 T 17-10-2018 FORC55_2195 3875801882e51fb1b69821f1d2dcbd0b 366 Gene3D G3DSA:1.10.287.470 116 175 1.4E-47 T 17-10-2018 FORC55_2195 3875801882e51fb1b69821f1d2dcbd0b 366 SUPERFAMILY SSF111369 71 284 7.72E-28 T 17-10-2018 FORC55_0658 6a2e6f61d179cd68070132ac25ba9515 235 Gene3D G3DSA:2.60.40.4070 110 196 4.4E-36 T 17-10-2018 FORC55_0658 6a2e6f61d179cd68070132ac25ba9515 235 Pfam PF13860 FlgD Ig-like domain 117 184 4.4E-20 T 17-10-2018 IPR025965 FlgD Ig-like domain FORC55_0658 6a2e6f61d179cd68070132ac25ba9515 235 Gene3D G3DSA:2.30.30.910 98 221 4.4E-36 T 17-10-2018 FORC55_0658 6a2e6f61d179cd68070132ac25ba9515 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 2.1E-21 T 17-10-2018 IPR005648 Flagellar hook capping protein FORC55_0658 6a2e6f61d179cd68070132ac25ba9515 235 Pfam PF13861 FlgD Tudor-like domain 93 229 8.7E-15 T 17-10-2018 IPR025963 FlgD Tudor-like domain FORC55_1093 ef97fb3551dfe9b32c3389cd1229d7d8 198 Pfam PF07105 Protein of unknown function (DUF1367) 3 197 1.1E-59 T 17-10-2018 IPR009797 Protein of unknown function DUF1367 FORC55_3317 df746d95e98e1cb579ad2f1dd32677d4 106 Pfam PF03927 NapD protein 11 85 1.6E-27 T 17-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly FORC55_3317 df746d95e98e1cb579ad2f1dd32677d4 106 Gene3D G3DSA:3.30.70.920 11 80 1.1E-20 T 17-10-2018 FORC55_3317 df746d95e98e1cb579ad2f1dd32677d4 106 Hamap MF_02200 Chaperone NapD [napD]. 11 87 18.548 T 17-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly FORC55_0821 a1fbc1f2b5eca911518b44ceabfb9475 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 3.8E-45 T 17-10-2018 IPR020801 Polyketide synthase, acyl transferase domain FORC55_0821 a1fbc1f2b5eca911518b44ceabfb9475 307 Pfam PF00698 Acyl transferase domain 7 300 3.3E-38 T 17-10-2018 IPR014043 Acyl transferase FORC55_0821 a1fbc1f2b5eca911518b44ceabfb9475 307 SUPERFAMILY SSF55048 128 197 1.31E-17 T 17-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding FORC55_0821 a1fbc1f2b5eca911518b44ceabfb9475 307 SUPERFAMILY SSF52151 4 305 1.86E-82 T 17-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase FORC55_0821 a1fbc1f2b5eca911518b44ceabfb9475 307 Gene3D G3DSA:3.40.366.10 5 286 2.7E-111 T 17-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 FORC55_0821 a1fbc1f2b5eca911518b44ceabfb9475 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 6.2E-127 T 17-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 FORC55_0821 a1fbc1f2b5eca911518b44ceabfb9475 307 Gene3D G3DSA:3.30.70.250 125 197 2.7E-111 T 17-10-2018 FORC55_0821 a1fbc1f2b5eca911518b44ceabfb9475 307 PIRSF PIRSF000446 1 307 1.1E-134 T 17-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 FORC55_0706 836f2794151ca987cc7a81315acbfd1b 302 Pfam PF04261 Dyp-type peroxidase family 5 293 5.0E-95 T 17-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 FORC55_0706 836f2794151ca987cc7a81315acbfd1b 302 SUPERFAMILY SSF54909 2 297 3.04E-97 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel FORC55_0706 836f2794151ca987cc7a81315acbfd1b 302 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 2.3E-89 T 17-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 FORC55_2322 62158cab2751c511ba5b0f80018daf59 140 SUPERFAMILY SSF53098 3 137 3.34E-37 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2322 62158cab2751c511ba5b0f80018daf59 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.274 T 17-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 FORC55_2322 62158cab2751c511ba5b0f80018daf59 140 SMART SM00732 3 104 2.3E-35 T 17-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 FORC55_2322 62158cab2751c511ba5b0f80018daf59 140 Gene3D G3DSA:3.30.420.140 1 138 5.3E-39 T 17-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 FORC55_2322 62158cab2751c511ba5b0f80018daf59 140 Pfam PF03652 Holliday junction resolvase 4 136 1.5E-35 T 17-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 FORC55_2322 62158cab2751c511ba5b0f80018daf59 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 4.6E-48 T 17-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 FORC55_1016 ab3f42f924c609eaa8972e59df4decc9 350 Gene3D G3DSA:1.10.287.470 88 148 2.3E-77 T 17-10-2018 FORC55_1016 ab3f42f924c609eaa8972e59df4decc9 350 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 342 3.8E-68 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 FORC55_1016 ab3f42f924c609eaa8972e59df4decc9 350 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 256 9.3E-17 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain FORC55_1016 ab3f42f924c609eaa8972e59df4decc9 350 Gene3D G3DSA:2.40.50.100 54 187 2.3E-77 T 17-10-2018 FORC55_1016 ab3f42f924c609eaa8972e59df4decc9 350 SUPERFAMILY SSF111369 44 202 3.14E-25 T 17-10-2018 FORC55_1016 ab3f42f924c609eaa8972e59df4decc9 350 Gene3D G3DSA:2.40.420.20 34 340 2.3E-77 T 17-10-2018 FORC55_1016 ab3f42f924c609eaa8972e59df4decc9 350 Gene3D G3DSA:2.40.30.170 40 264 2.3E-77 T 17-10-2018 FORC55_0678 2a5a6119c3cddd82625249017ee20f62 270 Gene3D G3DSA:1.25.40.10 166 266 5.7E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0678 2a5a6119c3cddd82625249017ee20f62 270 Pfam PF13369 Transglutaminase-like superfamily 34 184 9.7E-45 T 17-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 FORC55_0678 2a5a6119c3cddd82625249017ee20f62 270 SUPERFAMILY SSF48452 190 256 7.59E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_0678 2a5a6119c3cddd82625249017ee20f62 270 Pfam PF13371 Tetratricopeptide repeat 187 259 7.0E-23 T 17-10-2018 FORC55_2446 d9c51c032af7701a887389ef6bb896b5 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 467 5.8E-49 T 17-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 FORC55_2446 d9c51c032af7701a887389ef6bb896b5 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 468 5.5E-81 T 17-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 FORC55_1176 35e258f0c5afe3086de9308b6fccab46 147 Gene3D G3DSA:2.40.128.270 39 142 2.6E-30 T 17-10-2018 IPR038670 HslJ-like superfamily FORC55_1176 35e258f0c5afe3086de9308b6fccab46 147 Pfam PF03724 META domain 33 139 4.6E-28 T 17-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ FORC55_2103 d4dca0c3bf0ae0e03847995b6b51afe2 357 SUPERFAMILY SSF57783 18 103 5.27E-8 T 17-10-2018 FORC55_2103 d4dca0c3bf0ae0e03847995b6b51afe2 357 Pfam PF08273 Zinc-binding domain of primase-helicase 37 75 3.2E-14 T 17-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 FORC55_2103 d4dca0c3bf0ae0e03847995b6b51afe2 357 SMART SM00778 37 75 5.2E-15 T 17-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 FORC55_2103 d4dca0c3bf0ae0e03847995b6b51afe2 357 Pfam PF13362 Toprim domain 251 349 1.9E-16 T 17-10-2018 IPR006171 TOPRIM domain FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 2.3E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 184 2.3E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 107 2.3E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 287 297 2.3E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 219 231 2.3E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 198 210 2.3E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 246 5.4E-66 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 139 5.4E-66 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 100 119 5.4E-66 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 271 296 5.4E-66 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 139 158 5.4E-66 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 247 268 5.4E-66 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 274 286 - T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 226 241 - T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 Pfam PF00813 FliP family 102 293 3.5E-79 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 FORC55_0728 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 102 297 1.8E-82 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 FORC55_1729 df591c283800b07099e576b2647a2d58 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.652 T 17-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 FORC55_1729 df591c283800b07099e576b2647a2d58 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 7.8E-75 T 17-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 FORC55_1729 df591c283800b07099e576b2647a2d58 181 Gene3D G3DSA:3.40.50.2020 1 181 2.4E-68 T 17-10-2018 FORC55_1729 df591c283800b07099e576b2647a2d58 181 Pfam PF00156 Phosphoribosyl transferase domain 30 154 2.3E-15 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 FORC55_1729 df591c283800b07099e576b2647a2d58 181 SUPERFAMILY SSF53271 11 178 9.94E-53 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like FORC55_1053 a11210182584abffcde7bef63035977c 194 Pfam PF01810 LysE type translocator 17 187 4.1E-14 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_0919 caf46f71be66a3fbd2e5e6330f61b36a 347 Gene3D G3DSA:1.10.3720.10 133 338 2.5E-17 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0919 caf46f71be66a3fbd2e5e6330f61b36a 347 SUPERFAMILY SSF161098 139 325 1.83E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0919 caf46f71be66a3fbd2e5e6330f61b36a 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 8.2E-29 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_0963 d62a9048c72982a472ed4a3e0bf407d6 253 Pfam PF06629 MltA-interacting protein MipA 29 253 2.9E-38 T 17-10-2018 IPR010583 MltA-interacting MipA FORC55_2362 27352d5f10cce86b50adaf74d068cc77 265 SUPERFAMILY SSF49785 2 155 3.74E-19 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_2362 27352d5f10cce86b50adaf74d068cc77 265 Gene3D G3DSA:2.60.120.260 26 156 4.3E-11 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_1959 8a7cc8c9caa99d39d9b04b2022859e9f 109 SUPERFAMILY SSF143410 1 105 3.79E-33 T 17-10-2018 IPR023389 DOPA-like superfamily FORC55_1959 8a7cc8c9caa99d39d9b04b2022859e9f 109 Gene3D G3DSA:3.30.70.1240 1 109 1.5E-26 T 17-10-2018 IPR023389 DOPA-like superfamily FORC55_1959 8a7cc8c9caa99d39d9b04b2022859e9f 109 PIRSF PIRSF028139 1 107 2.7E-42 T 17-10-2018 IPR014980 Dopa 4,5-dioxygenase FORC55_1959 8a7cc8c9caa99d39d9b04b2022859e9f 109 Pfam PF08883 Dopa 4,5-dioxygenase family 2 102 1.5E-25 T 17-10-2018 IPR014980 Dopa 4,5-dioxygenase FORC55_1989 00840c868af356928fbf6d015262827b 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 5.8E-35 T 17-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 FORC55_1989 00840c868af356928fbf6d015262827b 64 PIRSF PIRSF039003 1 64 4.8E-34 T 17-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 FORC55_1989 00840c868af356928fbf6d015262827b 64 SUPERFAMILY SSF140319 1 62 2.62E-28 T 17-10-2018 IPR036762 IscX-like superfamily FORC55_1989 00840c868af356928fbf6d015262827b 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 7.7E-34 T 17-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 FORC55_1989 00840c868af356928fbf6d015262827b 64 Gene3D G3DSA:1.10.10.600 1 64 8.5E-30 T 17-10-2018 IPR036762 IscX-like superfamily FORC55_1405 52c7c7b531791f1299bba5f681d63344 104 SUPERFAMILY SSF103481 5 102 1.05E-18 T 17-10-2018 FORC55_1405 52c7c7b531791f1299bba5f681d63344 104 Gene3D G3DSA:1.10.3730.20 1 104 4.0E-30 T 17-10-2018 FORC55_1405 52c7c7b531791f1299bba5f681d63344 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 4.8E-25 T 17-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 FORC55_1943 0f62fa258b88caba855d7afb82ae29d7 107 SUPERFAMILY SSF54862 3 101 3.77E-23 T 17-10-2018 FORC55_1943 0f62fa258b88caba855d7afb82ae29d7 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.5E-12 T 17-10-2018 IPR000813 7Fe ferredoxin GO:0009055 FORC55_1943 0f62fa258b88caba855d7afb82ae29d7 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.5E-12 T 17-10-2018 IPR000813 7Fe ferredoxin GO:0009055 FORC55_1943 0f62fa258b88caba855d7afb82ae29d7 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.5E-12 T 17-10-2018 IPR000813 7Fe ferredoxin GO:0009055 FORC55_1943 0f62fa258b88caba855d7afb82ae29d7 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 9.8E-7 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain FORC55_1943 0f62fa258b88caba855d7afb82ae29d7 107 Gene3D G3DSA:3.30.70.20 2 107 1.6E-26 T 17-10-2018 FORC55_1943 0f62fa258b88caba855d7afb82ae29d7 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 1.5E-18 T 17-10-2018 IPR022569 Ferredoxin, C-terminal FORC55_3221 5514708360f8890b129153ef1385d2bf 198 Gene3D G3DSA:1.10.10.60 1 65 5.1E-22 T 17-10-2018 FORC55_3221 5514708360f8890b129153ef1385d2bf 198 SUPERFAMILY SSF48498 82 182 9.64E-17 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily FORC55_3221 5514708360f8890b129153ef1385d2bf 198 Gene3D G3DSA:1.10.357.10 71 191 1.1E-16 T 17-10-2018 FORC55_3221 5514708360f8890b129153ef1385d2bf 198 SUPERFAMILY SSF46689 2 67 2.67E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3221 5514708360f8890b129153ef1385d2bf 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 2.6E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_0570 f5d356595718b5b48468549a1a395c1a 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 37.043 T 17-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 FORC55_0570 f5d356595718b5b48468549a1a395c1a 210 PIRSF PIRSF006102 3 210 4.0E-73 T 17-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 FORC55_0570 f5d356595718b5b48468549a1a395c1a 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.0E-108 T 17-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 FORC55_0570 f5d356595718b5b48468549a1a395c1a 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 3.6E-63 T 17-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 FORC55_0404 faa86fc4dde6ed2307c22372b182fec1 323 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 317 43.631 T 17-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 FORC55_0404 faa86fc4dde6ed2307c22372b182fec1 323 Gene3D G3DSA:3.30.70.1400 29 115 2.4E-38 T 17-10-2018 FORC55_0404 faa86fc4dde6ed2307c22372b182fec1 323 Gene3D G3DSA:2.40.30.160 190 313 1.6E-31 T 17-10-2018 FORC55_0404 faa86fc4dde6ed2307c22372b182fec1 323 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.9E-24 T 17-10-2018 IPR017703 YgfZ/GcvT conserved site FORC55_0404 faa86fc4dde6ed2307c22372b182fec1 323 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 134 8.1E-5 T 17-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain FORC55_0404 faa86fc4dde6ed2307c22372b182fec1 323 SUPERFAMILY SSF103025 16 235 9.1E-55 T 17-10-2018 FORC55_0404 faa86fc4dde6ed2307c22372b182fec1 323 SUPERFAMILY SSF101790 237 320 1.96E-19 T 17-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal FORC55_0404 faa86fc4dde6ed2307c22372b182fec1 323 Gene3D G3DSA:3.30.70.1630 26 187 2.4E-38 T 17-10-2018 FORC55_0331 e6c874fab3771a1c30aebfd55e0f3b1c 237 Pfam PF10986 Protein of unknown function (DUF2796) 149 233 8.0E-20 T 17-10-2018 IPR021253 Protein of unknown function DUF2796 FORC55_0331 e6c874fab3771a1c30aebfd55e0f3b1c 237 Pfam PF10986 Protein of unknown function (DUF2796) 33 149 3.6E-28 T 17-10-2018 IPR021253 Protein of unknown function DUF2796 FORC55_0374 980a875cfcb16e7b7ad13b5fc2d13149 245 SUPERFAMILY SSF55120 14 220 2.08E-63 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_0374 980a875cfcb16e7b7ad13b5fc2d13149 245 Pfam PF00849 RNA pseudouridylate synthase 22 168 8.6E-28 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_0374 980a875cfcb16e7b7ad13b5fc2d13149 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_0374 980a875cfcb16e7b7ad13b5fc2d13149 245 Gene3D G3DSA:3.30.2350.10 4 216 6.1E-68 T 17-10-2018 FORC55_1701 c708e378027698fcfd476eaf49fed08d 380 Pfam PF08668 HDOD domain 142 278 1.2E-26 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD FORC55_1701 c708e378027698fcfd476eaf49fed08d 380 Pfam PF00072 Response regulator receiver domain 8 113 2.6E-10 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1701 c708e378027698fcfd476eaf49fed08d 380 SUPERFAMILY SSF52172 6 125 1.42E-16 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1701 c708e378027698fcfd476eaf49fed08d 380 SUPERFAMILY SSF109604 133 371 4.39E-37 T 17-10-2018 FORC55_1701 c708e378027698fcfd476eaf49fed08d 380 PIRSF PIRSF036883 1 380 3.6E-197 T 17-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative FORC55_1701 c708e378027698fcfd476eaf49fed08d 380 Gene3D G3DSA:3.40.50.2300 4 127 4.4E-16 T 17-10-2018 FORC55_1701 c708e378027698fcfd476eaf49fed08d 380 SMART SM00448 6 117 1.3E-5 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1701 c708e378027698fcfd476eaf49fed08d 380 Gene3D G3DSA:1.10.3210.10 130 377 2.1E-36 T 17-10-2018 FORC55_0342 940dd7d9cc60aac027507ee82bbc33a6 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 9 329 6.5E-148 T 17-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 FORC55_0342 940dd7d9cc60aac027507ee82bbc33a6 330 Gene3D G3DSA:3.40.190.10 26 300 1.1E-116 T 17-10-2018 FORC55_0342 940dd7d9cc60aac027507ee82bbc33a6 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 8.1E-155 T 17-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 FORC55_0342 940dd7d9cc60aac027507ee82bbc33a6 330 SUPERFAMILY SSF53850 24 326 2.88E-66 T 17-10-2018 FORC55_0342 940dd7d9cc60aac027507ee82bbc33a6 330 Gene3D G3DSA:3.40.190.10 126 325 1.1E-116 T 17-10-2018 FORC55_0342 940dd7d9cc60aac027507ee82bbc33a6 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 6.3E-21 T 17-10-2018 FORC55_0866 63db9175439fdcb0558b82f88ee3cff6 292 TIGRFAM TIGR01929 menB: naphthoate synthase 29 288 3.7E-145 T 17-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 FORC55_0866 63db9175439fdcb0558b82f88ee3cff6 292 Pfam PF00378 Enoyl-CoA hydratase/isomerase 38 286 5.4E-78 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 FORC55_0866 63db9175439fdcb0558b82f88ee3cff6 292 Gene3D G3DSA:1.10.12.10 230 280 2.8E-31 T 17-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal FORC55_0866 63db9175439fdcb0558b82f88ee3cff6 292 SUPERFAMILY SSF52096 21 288 5.27E-79 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_0866 63db9175439fdcb0558b82f88ee3cff6 292 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 130 150 - T 17-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 FORC55_0866 63db9175439fdcb0558b82f88ee3cff6 292 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 22 291 56.334 T 17-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 FORC55_0866 63db9175439fdcb0558b82f88ee3cff6 292 Gene3D G3DSA:3.90.226.10 8 229 2.2E-84 T 17-10-2018 FORC55_3026 9b78af5225a1df9f51d7e9d15b99b7e1 156 Gene3D G3DSA:3.40.630.30 1 123 6.0E-7 T 17-10-2018 FORC55_3026 9b78af5225a1df9f51d7e9d15b99b7e1 156 SUPERFAMILY SSF55729 36 118 4.61E-6 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0062 bb4e880672c0cd532147e5f0170805e9 175 SUPERFAMILY SSF47240 1 159 4.88E-59 T 17-10-2018 IPR009078 Ferritin-like superfamily FORC55_0062 bb4e880672c0cd532147e5f0170805e9 175 Gene3D G3DSA:1.20.1260.10 1 175 7.0E-54 T 17-10-2018 IPR012347 Ferritin-like FORC55_0062 bb4e880672c0cd532147e5f0170805e9 175 Pfam PF00210 Ferritin-like domain 8 143 1.1E-39 T 17-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 FORC55_1030 c568d43428d57eacee666071a103b6c7 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 214 1.2E-86 T 17-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 FORC55_1030 c568d43428d57eacee666071a103b6c7 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 87.221 T 17-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 FORC55_1030 c568d43428d57eacee666071a103b6c7 243 SUPERFAMILY SSF55729 4 232 3.07E-85 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_1030 c568d43428d57eacee666071a103b6c7 243 Gene3D G3DSA:3.40.630.70 64 241 3.7E-60 T 17-10-2018 FORC55_1030 c568d43428d57eacee666071a103b6c7 243 Gene3D G3DSA:2.30.210.20 4 63 6.0E-25 T 17-10-2018 FORC55_1030 c568d43428d57eacee666071a103b6c7 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 1.5E-66 T 17-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 FORC55_2945 38e4e9313480def67b2b45b92f60a094 226 SUPERFAMILY SSF56672 1 195 8.9E-24 T 17-10-2018 FORC55_2945 38e4e9313480def67b2b45b92f60a094 226 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 16 114 3.2E-18 T 17-10-2018 IPR000477 Reverse transcriptase domain FORC55_2945 38e4e9313480def67b2b45b92f60a094 226 Pfam PF08388 Group II intron, maturase-specific domain 134 209 1.2E-22 T 17-10-2018 IPR013597 Group II intron, maturase-specific FORC55_0845 6b3587bbbff56e4fdbe32682d9999b21 95 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 2.3E-28 T 17-10-2018 IPR009749 Protein of unknown function DUF1315 FORC55_3019 593a8063de720fb1af382544f1bf629a 158 Gene3D G3DSA:3.40.630.30 1 156 1.8E-28 T 17-10-2018 FORC55_3019 593a8063de720fb1af382544f1bf629a 158 SUPERFAMILY SSF55729 3 154 3.9E-26 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3019 593a8063de720fb1af382544f1bf629a 158 Pfam PF13673 Acetyltransferase (GNAT) domain 36 138 1.1E-17 T 17-10-2018 IPR000182 GNAT domain FORC55_0233 965d4aeb6f11ba6124f7e0dbc6556e63 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 98 115 5.0E-5 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_0233 965d4aeb6f11ba6124f7e0dbc6556e63 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 5.0E-5 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 FORC55_0233 965d4aeb6f11ba6124f7e0dbc6556e63 324 Gene3D G3DSA:3.30.930.10 1 324 1.6E-109 T 17-10-2018 FORC55_0233 965d4aeb6f11ba6124f7e0dbc6556e63 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 8.2E-128 T 17-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 FORC55_0233 965d4aeb6f11ba6124f7e0dbc6556e63 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 320 9.9E-44 T 17-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 FORC55_0233 965d4aeb6f11ba6124f7e0dbc6556e63 324 SUPERFAMILY SSF55681 10 322 1.06E-82 T 17-10-2018 FORC55_0233 965d4aeb6f11ba6124f7e0dbc6556e63 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 53.374 T 17-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 FORC55_0208 0004434239f7bfb3ba0c30e9365687ba 105 Gene3D G3DSA:1.10.140.10 2 105 3.2E-56 T 17-10-2018 IPR023453 Methionine repressor MetJ domain superfamily FORC55_0208 0004434239f7bfb3ba0c30e9365687ba 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 4.7E-59 T 17-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 FORC55_0208 0004434239f7bfb3ba0c30e9365687ba 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.123 T 17-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 FORC55_0208 0004434239f7bfb3ba0c30e9365687ba 105 SUPERFAMILY SSF47598 3 104 2.89E-56 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 FORC55_0208 0004434239f7bfb3ba0c30e9365687ba 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 17-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 FORC55_0746 78025e0c2ed3ae19261dad3610c6ba29 146 Pfam PF03788 LrgA family 27 120 7.5E-29 T 17-10-2018 IPR005538 LrgA/CidA family GO:0016021 FORC55_0559 eb8ea4be475a9d1fef5a3f27a7432b9e 193 SUPERFAMILY SSF88697 3 188 1.39E-47 T 17-10-2018 IPR015947 PUA-like superfamily FORC55_0559 eb8ea4be475a9d1fef5a3f27a7432b9e 193 Gene3D G3DSA:2.30.130.40 1 110 1.1E-30 T 17-10-2018 FORC55_0559 eb8ea4be475a9d1fef5a3f27a7432b9e 193 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 114 1.4E-15 T 17-10-2018 IPR003111 Lon, substrate-binding domain FORC55_0559 eb8ea4be475a9d1fef5a3f27a7432b9e 193 SMART SM00464 3 189 6.9E-4 T 17-10-2018 IPR003111 Lon, substrate-binding domain FORC55_1289 22e1b3398622010ab77c9cf78aa75def 254 Gene3D G3DSA:3.30.200.20 1 59 1.6E-11 T 17-10-2018 FORC55_1289 22e1b3398622010ab77c9cf78aa75def 254 SUPERFAMILY SSF56112 7 248 2.5E-37 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily FORC55_1289 22e1b3398622010ab77c9cf78aa75def 254 Gene3D G3DSA:3.90.1200.10 63 254 1.4E-64 T 17-10-2018 FORC55_1289 22e1b3398622010ab77c9cf78aa75def 254 Pfam PF03881 Fructosamine kinase 2 253 4.2E-112 T 17-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 FORC55_1289 22e1b3398622010ab77c9cf78aa75def 254 PIRSF PIRSF006221 1 254 5.5E-98 T 17-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 FORC55_3501 1b4e143d0c1ea22206b9b3ca31cad170 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 194 1.3E-23 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 4.9E-28 T 17-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 8.9E-12 T 17-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 4.0E-42 T 17-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 SUPERFAMILY SSF51344 5 87 7.06E-24 T 17-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.433 T 17-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 SUPERFAMILY SSF46604 89 138 3.66E-14 T 17-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 Gene3D G3DSA:2.60.15.10 4 91 1.4E-30 T 17-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 2.0E-40 T 17-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 FORC55_2645 ec44c642affa0bad021ec655b588dc3b 140 Gene3D G3DSA:1.20.5.440 92 135 5.0E-19 T 17-10-2018 FORC55_2012 28ed5c3677e2a007b3af2181e5e97113 258 Gene3D G3DSA:3.40.50.300 1 242 1.9E-100 T 17-10-2018 FORC55_2012 28ed5c3677e2a007b3af2181e5e97113 258 SUPERFAMILY SSF52540 35 223 2.31E-32 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2012 28ed5c3677e2a007b3af2181e5e97113 258 PIRSF PIRSF028756 1 258 1.5E-134 T 17-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 FORC55_2012 28ed5c3677e2a007b3af2181e5e97113 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 230 3.6E-116 T 17-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 FORC55_2012 28ed5c3677e2a007b3af2181e5e97113 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 230 5.4E-116 T 17-10-2018 IPR022488 Polyphosphate kinase-2-related FORC55_1252 a71227c868f962afbba7c101ef1eae5a 556 Pfam PF00501 AMP-binding enzyme 41 453 2.9E-64 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_1252 a71227c868f962afbba7c101ef1eae5a 556 SUPERFAMILY SSF56801 33 550 6.15E-103 T 17-10-2018 FORC55_1252 a71227c868f962afbba7c101ef1eae5a 556 Gene3D G3DSA:3.30.300.30 449 556 7.6E-27 T 17-10-2018 FORC55_1252 a71227c868f962afbba7c101ef1eae5a 556 Gene3D G3DSA:3.40.50.12780 30 448 2.8E-150 T 17-10-2018 FORC55_1252 a71227c868f962afbba7c101ef1eae5a 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 199 210 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_1508 53cb2f5630633ac2a1dbe583c14f724d 111 SUPERFAMILY SSF46973 2 98 1.03E-33 T 17-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 FORC55_1508 53cb2f5630633ac2a1dbe583c14f724d 111 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 3.6E-34 T 17-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 FORC55_1508 53cb2f5630633ac2a1dbe583c14f724d 111 PIRSF PIRSF000699 1 105 1.8E-39 T 17-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 FORC55_1508 53cb2f5630633ac2a1dbe583c14f724d 111 Gene3D G3DSA:1.20.58.280 1 101 1.5E-34 T 17-10-2018 FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 PRINTS PR01576 Peptide deformylase signature 120 149 5.8E-37 T 17-10-2018 IPR023635 Peptide deformylase FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 PRINTS PR01576 Peptide deformylase signature 89 100 5.8E-37 T 17-10-2018 IPR023635 Peptide deformylase FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 PRINTS PR01576 Peptide deformylase signature 101 119 5.8E-37 T 17-10-2018 IPR023635 Peptide deformylase FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 PRINTS PR01576 Peptide deformylase signature 33 62 5.8E-37 T 17-10-2018 IPR023635 Peptide deformylase FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 PIRSF PIRSF004749 1 169 1.4E-56 T 17-10-2018 IPR023635 Peptide deformylase FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.85 T 17-10-2018 IPR023635 Peptide deformylase FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 SUPERFAMILY SSF56420 3 165 3.14E-62 T 17-10-2018 IPR036821 Peptide deformylase superfamily FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 Gene3D G3DSA:3.90.45.10 1 169 9.6E-68 T 17-10-2018 IPR036821 Peptide deformylase superfamily FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 Pfam PF01327 Polypeptide deformylase 4 152 1.5E-49 T 17-10-2018 IPR023635 Peptide deformylase FORC55_0033 8fac7c120cc643ea75f56ca08b173f41 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.7E-61 T 17-10-2018 IPR023635 Peptide deformylase FORC55_1779 d5204fbebe1b7a0326322ef7129c796e 1506 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1460 1502 5.2E-16 T 17-10-2018 IPR020011 Motility protein FimV, C-terminal FORC55_1779 d5204fbebe1b7a0326322ef7129c796e 1506 Gene3D G3DSA:1.20.58.2200 1444 1502 6.7E-14 T 17-10-2018 IPR038440 FimV, C-terminal domain superfamily FORC55_1779 d5204fbebe1b7a0326322ef7129c796e 1506 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 1 51 1.6E-13 T 17-10-2018 IPR020012 Motility protein FimV, N-terminal FORC55_0025 0f0c53e37f63e223d631f37427d2f1a0 88 Gene3D G3DSA:1.10.1580.20 1 88 5.5E-44 T 17-10-2018 IPR038134 YihD-like superfamily FORC55_0025 0f0c53e37f63e223d631f37427d2f1a0 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-45 T 17-10-2018 IPR009383 Protein of unknown function DUF1040 FORC55_0025 0f0c53e37f63e223d631f37427d2f1a0 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 5.5E-45 T 17-10-2018 IPR009383 Protein of unknown function DUF1040 FORC55_2559 408ac91c7a316f73fafb07f849bfc054 345 SUPERFAMILY SSF53756 2 341 8.48E-71 T 17-10-2018 FORC55_2559 408ac91c7a316f73fafb07f849bfc054 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 309 7.9E-20 T 17-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 FORC55_2559 408ac91c7a316f73fafb07f849bfc054 345 Gene3D G3DSA:3.40.50.2000 1 146 6.9E-28 T 17-10-2018 FORC55_2559 408ac91c7a316f73fafb07f849bfc054 345 Gene3D G3DSA:3.40.50.2000 166 342 4.8E-22 T 17-10-2018 FORC55_0862 54ea722a2221b3a6bdf3df0764639699 404 Pfam PF00155 Aminotransferase class I and II 61 392 1.2E-48 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_0862 54ea722a2221b3a6bdf3df0764639699 404 Gene3D G3DSA:3.40.640.10 53 294 2.5E-146 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_0862 54ea722a2221b3a6bdf3df0764639699 404 Gene3D G3DSA:3.90.1150.10 21 398 2.5E-146 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_0862 54ea722a2221b3a6bdf3df0764639699 404 SUPERFAMILY SSF53383 6 399 5.32E-96 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3518 43825771d1c34681c7fec2d35492e030 375 Gene3D G3DSA:3.40.1350.30 56 211 1.2E-75 T 17-10-2018 FORC55_3518 43825771d1c34681c7fec2d35492e030 375 SUPERFAMILY SSF53335 3 374 4.51E-52 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_3518 43825771d1c34681c7fec2d35492e030 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 17-10-2018 IPR030390 RNA methyltransferase TrmA, active site FORC55_3518 43825771d1c34681c7fec2d35492e030 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 9.5E-211 T 17-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 FORC55_3518 43825771d1c34681c7fec2d35492e030 375 Gene3D G3DSA:3.40.50.150 14 368 1.2E-75 T 17-10-2018 FORC55_3518 43825771d1c34681c7fec2d35492e030 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 82.42 T 17-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 FORC55_3518 43825771d1c34681c7fec2d35492e030 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 4.7E-18 T 17-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 FORC55_3398 dac383eee21a91150ef98b7926f4f78f 244 SUPERFAMILY SSF46689 8 86 1.85E-16 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_3398 dac383eee21a91150ef98b7926f4f78f 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.6E-7 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_3398 dac383eee21a91150ef98b7926f4f78f 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.6E-7 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_3398 dac383eee21a91150ef98b7926f4f78f 244 Gene3D G3DSA:1.10.357.10 2 198 2.7E-22 T 17-10-2018 FORC55_3398 dac383eee21a91150ef98b7926f4f78f 244 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 3.7E-11 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1190 32e73bb01013370cb926081203f9083a 202 Gene3D G3DSA:1.10.150.240 19 84 1.1E-38 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 FORC55_1190 32e73bb01013370cb926081203f9083a 202 Gene3D G3DSA:3.40.50.1000 7 183 1.1E-38 T 17-10-2018 IPR023214 HAD superfamily FORC55_1190 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 2.7E-10 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_1190 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.7E-10 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_1190 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 2.7E-10 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_1190 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.7E-10 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_1190 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 2.7E-10 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_1190 32e73bb01013370cb926081203f9083a 202 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 184 1.0E-11 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 FORC55_1190 32e73bb01013370cb926081203f9083a 202 SUPERFAMILY SSF56784 4 192 2.5E-33 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_1190 32e73bb01013370cb926081203f9083a 202 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 183 6.4E-10 T 17-10-2018 FORC55_2081 136ad4ab993620e633b1bd780dcf4146 182 Gene3D G3DSA:1.10.530.10 27 180 2.7E-8 T 17-10-2018 FORC55_2081 136ad4ab993620e633b1bd780dcf4146 182 SUPERFAMILY SSF53955 29 178 1.25E-17 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_2081 136ad4ab993620e633b1bd780dcf4146 182 Pfam PF01464 Transglycosylase SLT domain 29 162 9.2E-10 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 FORC55_1037 600ffd8542fb967196aadef068bf2a98 272 PRINTS PR00412 Epoxide hydrolase signature 244 266 4.4E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_1037 600ffd8542fb967196aadef068bf2a98 272 PRINTS PR00412 Epoxide hydrolase signature 212 228 4.4E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_1037 600ffd8542fb967196aadef068bf2a98 272 PRINTS PR00412 Epoxide hydrolase signature 31 49 4.4E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 FORC55_1037 600ffd8542fb967196aadef068bf2a98 272 Pfam PF00561 alpha/beta hydrolase fold 26 129 7.3E-21 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_1037 600ffd8542fb967196aadef068bf2a98 272 Gene3D G3DSA:3.40.50.1820 12 269 2.0E-42 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_1037 600ffd8542fb967196aadef068bf2a98 272 SUPERFAMILY SSF53474 18 269 5.93E-45 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0230 9ad27f40990f51c271f0e5ee65197931 127 Gene3D G3DSA:1.20.1300.10 1 127 1.2E-47 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_0230 9ad27f40990f51c271f0e5ee65197931 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 27.256 T 17-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 FORC55_0230 9ad27f40990f51c271f0e5ee65197931 127 Pfam PF02300 Fumarate reductase subunit C 2 127 4.2E-49 T 17-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 FORC55_0230 9ad27f40990f51c271f0e5ee65197931 127 PIRSF PIRSF000180 1 127 2.7E-55 T 17-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 FORC55_0230 9ad27f40990f51c271f0e5ee65197931 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-64 T 17-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 FORC55_0230 9ad27f40990f51c271f0e5ee65197931 127 SUPERFAMILY SSF81343 1 127 2.4E-52 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 FORC55_3580 4205912ec87a8f3d196d1c2815cb9632 347 SUPERFAMILY SSF51395 3 338 4.28E-105 T 17-10-2018 FORC55_3580 4205912ec87a8f3d196d1c2815cb9632 347 Gene3D G3DSA:3.20.20.70 1 347 4.9E-124 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_3580 4205912ec87a8f3d196d1c2815cb9632 347 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 335 9.4E-84 T 17-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 FORC55_1025 7b6f872227d5d0c47acf8af3b6c42108 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 46 2.7E-11 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 FORC55_1025 7b6f872227d5d0c47acf8af3b6c42108 197 Gene3D G3DSA:1.10.357.10 1 197 1.8E-53 T 17-10-2018 FORC55_1025 7b6f872227d5d0c47acf8af3b6c42108 197 SUPERFAMILY SSF46689 1 65 4.93E-15 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 FORC55_1025 7b6f872227d5d0c47acf8af3b6c42108 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 12 43 - T 17-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site FORC55_1025 7b6f872227d5d0c47acf8af3b6c42108 197 SUPERFAMILY SSF48498 69 196 6.23E-43 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily FORC55_0279 8ed2dddd859ec8350baf897d691b5d7b 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 4.5E-33 T 17-10-2018 IPR012658 Conserved hypothetical protein CHP02443 FORC55_0279 8ed2dddd859ec8350baf897d691b5d7b 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 57 4.5E-20 T 17-10-2018 IPR012658 Conserved hypothetical protein CHP02443 FORC55_1590 851a9b40fd9a2c84a2ce1fb8ef171e6a 227 PIRSF PIRSF028111 1 227 6.7E-83 T 17-10-2018 IPR016868 Bacteriophage B3, Orf5 FORC55_1590 851a9b40fd9a2c84a2ce1fb8ef171e6a 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-11 T 17-10-2018 IPR024498 Domain of unknown function DUF2786 FORC55_0552 833ab92407faf761eb57863df0865884 368 Pfam PF03562 MltA specific insert domain 99 253 1.0E-36 T 17-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 FORC55_0552 833ab92407faf761eb57863df0865884 368 Gene3D G3DSA:2.40.40.10 52 349 1.2E-141 T 17-10-2018 IPR036908 RlpA-like domain superfamily FORC55_0552 833ab92407faf761eb57863df0865884 368 Gene3D G3DSA:2.40.240.50 120 258 1.2E-141 T 17-10-2018 FORC55_0552 833ab92407faf761eb57863df0865884 368 SUPERFAMILY SSF50685 25 351 1.43E-102 T 17-10-2018 IPR036908 RlpA-like domain superfamily FORC55_0552 833ab92407faf761eb57863df0865884 368 Pfam PF06725 3D domain 273 349 4.2E-20 T 17-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 FORC55_0552 833ab92407faf761eb57863df0865884 368 SMART SM00925 120 253 3.5E-68 T 17-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 FORC55_2155 fe6028831a220b614c054f32846e1a20 211 Pfam PF14348 Domain of unknown function (DUF4400) 33 209 3.6E-25 T 17-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type FORC55_0569 e033d1fbf81118b58554a419fa7f31c0 257 PIRSF PIRSF009437 1 257 1.1E-109 T 17-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 FORC55_0569 e033d1fbf81118b58554a419fa7f31c0 257 SMART SM00900 144 242 2.4E-33 T 17-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 FORC55_0569 e033d1fbf81118b58554a419fa7f31c0 257 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 254 36.61 T 17-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 FORC55_0569 e033d1fbf81118b58554a419fa7f31c0 257 Pfam PF04205 FMN-binding domain 144 239 2.0E-15 T 17-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 FORC55_0569 e033d1fbf81118b58554a419fa7f31c0 257 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 250 8.7E-96 T 17-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 FORC55_1438 93ee63522636b8c9a46d64ad554097fb 109 PIRSF PIRSF006223 2 109 1.1E-41 T 17-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE FORC55_1438 93ee63522636b8c9a46d64ad554097fb 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 4.5E-49 T 17-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE FORC55_1438 93ee63522636b8c9a46d64ad554097fb 109 SUPERFAMILY SSF69721 2 109 1.31E-40 T 17-10-2018 IPR025526 DsrC-like domain superfamily FORC55_1438 93ee63522636b8c9a46d64ad554097fb 109 Gene3D G3DSA:1.10.10.370 39 109 2.3E-31 T 17-10-2018 FORC55_1438 93ee63522636b8c9a46d64ad554097fb 109 Pfam PF04358 DsrC like protein 4 109 6.4E-44 T 17-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE FORC55_1438 93ee63522636b8c9a46d64ad554097fb 109 Gene3D G3DSA:3.30.1420.10 1 38 2.0E-12 T 17-10-2018 FORC55_3165 ebbf3c4428c409c1567ae36e191630b4 204 Gene3D G3DSA:3.90.1150.10 15 54 5.8E-79 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3165 ebbf3c4428c409c1567ae36e191630b4 204 Pfam PF00155 Aminotransferase class I and II 41 203 5.2E-13 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_3165 ebbf3c4428c409c1567ae36e191630b4 204 Gene3D G3DSA:3.40.640.10 55 204 5.8E-79 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3165 ebbf3c4428c409c1567ae36e191630b4 204 SUPERFAMILY SSF53383 6 204 3.79E-35 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3634 a0ac73b1af102b174d72a3698909847e 212 SUPERFAMILY SSF51735 1 210 2.8E-33 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3634 a0ac73b1af102b174d72a3698909847e 212 Gene3D G3DSA:3.40.50.720 1 211 5.7E-50 T 17-10-2018 FORC55_3634 a0ac73b1af102b174d72a3698909847e 212 Pfam PF13460 NAD(P)H-binding 7 197 1.1E-33 T 17-10-2018 IPR016040 NAD(P)-binding domain FORC55_0537 2dce7ed609735a1d5e8bc59c8bdc1e26 313 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 1.5E-54 T 17-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 FORC55_0537 2dce7ed609735a1d5e8bc59c8bdc1e26 313 Gene3D G3DSA:1.20.58.340 125 249 1.4E-29 T 17-10-2018 FORC55_0537 2dce7ed609735a1d5e8bc59c8bdc1e26 313 Gene3D G3DSA:1.20.58.340 252 309 3.1E-8 T 17-10-2018 FORC55_0537 2dce7ed609735a1d5e8bc59c8bdc1e26 313 Gene3D G3DSA:3.30.460.20 1 124 1.2E-40 T 17-10-2018 FORC55_0537 2dce7ed609735a1d5e8bc59c8bdc1e26 313 SUPERFAMILY SSF143865 10 230 9.68E-32 T 17-10-2018 FORC55_0537 2dce7ed609735a1d5e8bc59c8bdc1e26 313 SUPERFAMILY SSF144083 244 306 2.62E-13 T 17-10-2018 FORC55_3550 1c90f3f7ca2bfcb8af95f9481219d40c 307 SUPERFAMILY SSF103481 41 138 2.09E-13 T 17-10-2018 FORC55_3550 1c90f3f7ca2bfcb8af95f9481219d40c 307 SUPERFAMILY SSF103481 182 290 1.19E-5 T 17-10-2018 FORC55_3550 1c90f3f7ca2bfcb8af95f9481219d40c 307 Pfam PF00892 EamA-like transporter family 7 136 9.0E-15 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 Gene3D G3DSA:3.40.630.10 90 429 1.1E-106 T 17-10-2018 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 17-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 Pfam PF12404 Peptidase 5 81 1.5E-33 T 17-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 PIRSF PIRSF036388 1 429 3.2E-236 T 17-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 9.0E-46 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 9.0E-46 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 9.0E-46 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 9.0E-46 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 9.0E-46 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 SUPERFAMILY SSF53187 104 427 1.48E-101 T 17-10-2018 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.3E-102 T 17-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 FORC55_1988 b791127daea89b24f8a57d2cd89a2dca 429 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.96 T 17-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 FORC55_0563 ebc8d9c418eab4139f045d90b90d7c6a 182 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 17-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 FORC55_0563 ebc8d9c418eab4139f045d90b90d7c6a 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 2.2E-10 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 FORC55_0563 ebc8d9c418eab4139f045d90b90d7c6a 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 2.2E-10 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 FORC55_0563 ebc8d9c418eab4139f045d90b90d7c6a 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 2.2E-10 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 FORC55_0563 ebc8d9c418eab4139f045d90b90d7c6a 182 SUPERFAMILY SSF50891 19 180 6.28E-53 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily FORC55_0563 ebc8d9c418eab4139f045d90b90d7c6a 182 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 178 8.0E-42 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 FORC55_0563 ebc8d9c418eab4139f045d90b90d7c6a 182 PIRSF PIRSF001467 8 180 1.6E-22 T 17-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 FORC55_0563 ebc8d9c418eab4139f045d90b90d7c6a 182 Gene3D G3DSA:2.40.100.10 19 181 7.8E-58 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily FORC55_2679 9b465431f2306a24330b274dca9ccddb 111 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 41 88 1.5E-12 T 17-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 FORC55_2679 9b465431f2306a24330b274dca9ccddb 111 SUPERFAMILY SSF46955 40 94 9.89E-7 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily FORC55_2679 9b465431f2306a24330b274dca9ccddb 111 Pfam PF12728 Helix-turn-helix domain 41 90 1.3E-12 T 17-10-2018 FORC55_0986 3c050eb57da76f008c1ce2f6e1a598b7 330 SUPERFAMILY SSF109604 107 325 5.65E-42 T 17-10-2018 FORC55_0986 3c050eb57da76f008c1ce2f6e1a598b7 330 Pfam PF08668 HDOD domain 131 245 1.7E-14 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD FORC55_0986 3c050eb57da76f008c1ce2f6e1a598b7 330 Pfam PF00563 EAL domain 9 116 3.5E-13 T 17-10-2018 IPR001633 EAL domain FORC55_0986 3c050eb57da76f008c1ce2f6e1a598b7 330 SUPERFAMILY SSF141868 7 118 2.35E-21 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0986 3c050eb57da76f008c1ce2f6e1a598b7 330 Gene3D G3DSA:3.20.20.450 4 120 7.1E-17 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_0986 3c050eb57da76f008c1ce2f6e1a598b7 330 Gene3D G3DSA:1.10.3210.10 121 299 2.1E-22 T 17-10-2018 FORC55_2111 59acfe51f9c24dc5b931c0a51cf62b93 338 Pfam PF09588 YqaJ-like viral recombinase domain 13 147 1.0E-20 T 17-10-2018 IPR019080 YqaJ viral recombinase FORC55_2111 59acfe51f9c24dc5b931c0a51cf62b93 338 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 5 158 3.9E-42 T 17-10-2018 IPR017482 Putative phage-type endonuclease FORC55_2111 59acfe51f9c24dc5b931c0a51cf62b93 338 SUPERFAMILY SSF52980 1 199 1.77E-48 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_2111 59acfe51f9c24dc5b931c0a51cf62b93 338 Gene3D G3DSA:3.90.320.10 6 200 6.8E-34 T 17-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal FORC55_3544 93c66e889e3673b88661820cca9a7855 192 Gene3D G3DSA:2.170.170.11 17 134 1.7E-27 T 17-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 FORC55_3544 93c66e889e3673b88661820cca9a7855 192 SUPERFAMILY SSF51645 21 188 2.75E-16 T 17-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 5.5E-70 T 17-10-2018 FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 9.0E-53 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.0E-53 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.0E-53 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.0E-53 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 9.0E-53 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.0E-53 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 Gene3D G3DSA:3.40.50.720 1 248 7.0E-94 T 17-10-2018 FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 SUPERFAMILY SSF51735 8 247 1.05E-90 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 1.4E-102 T 17-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.2E-17 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.2E-17 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.2E-17 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR FORC55_0822 b30bac251f56f006a3918c76c8910a40 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 219 1.4E-5 T 17-10-2018 FORC55_3509 acc9a15219bd45f3aeb6b2c97ac567e9 372 Pfam PF01553 Acyltransferase 97 198 4.9E-9 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_3509 acc9a15219bd45f3aeb6b2c97ac567e9 372 SUPERFAMILY SSF69593 96 248 4.05E-8 T 17-10-2018 FORC55_0490 f17ded9f861e8a5fa28a51545579ab27 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 5.7E-40 T 17-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 FORC55_2756 48d957ebcd1855279238981437ede510 99 SUPERFAMILY SSF81296 12 95 6.53E-13 T 17-10-2018 IPR014756 Immunoglobulin E-set FORC55_2756 48d957ebcd1855279238981437ede510 99 Gene3D G3DSA:2.60.40.10 4 99 1.5E-15 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2916 74fdcba1b8bc614028544661d4445bf1 122 SUPERFAMILY SSF46785 47 93 1.48E-5 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1765 68f054990b3f24210d8f48cdc9eef1b5 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 3.1E-73 T 17-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 FORC55_1765 68f054990b3f24210d8f48cdc9eef1b5 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 27.758 T 17-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 FORC55_1765 68f054990b3f24210d8f48cdc9eef1b5 209 SMART SM00900 100 192 2.0E-36 T 17-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 FORC55_1765 68f054990b3f24210d8f48cdc9eef1b5 209 Pfam PF04205 FMN-binding domain 100 189 1.7E-20 T 17-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 FORC55_1765 68f054990b3f24210d8f48cdc9eef1b5 209 PIRSF PIRSF006091 1 206 1.8E-82 T 17-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 SUPERFAMILY SSF50998 37 375 4.71E-81 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 SMART SM00564 106 138 5.1 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 SMART SM00564 321 353 150.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 SMART SM00564 280 312 26.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 SMART SM00564 242 274 25.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 SMART SM00564 63 94 5.6E-5 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 SMART SM00564 192 223 490.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 SMART SM00564 147 178 0.082 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 9.3E-138 T 17-10-2018 IPR017687 Outer membrane protein assembly factor BamB FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 Gene3D G3DSA:2.130.10.10 18 386 1.8E-98 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 Pfam PF13360 PQQ-like domain 76 310 1.7E-53 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat FORC55_1981 3ae93abf0451f35e0abfc72c8724d713 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.776 T 17-10-2018 IPR017687 Outer membrane protein assembly factor BamB FORC55_0204 4360b85734712fbfabb29b92472d2739 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.054 T 17-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 FORC55_0204 4360b85734712fbfabb29b92472d2739 80 Gene3D G3DSA:1.20.5.340 1 79 2.4E-28 T 17-10-2018 FORC55_0204 4360b85734712fbfabb29b92472d2739 80 Pfam PF06005 Cell division protein ZapB 1 77 1.0E-25 T 17-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 FORC55_0147 2e361ba34dc28386563c66d287235a73 628 Pfam PF05170 AsmA family 1 569 9.5E-177 T 17-10-2018 IPR007844 AsmA FORC55_1878 8a9d4eb753e1d3e75d84227bff9c365d 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.3E-18 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 FORC55_1878 8a9d4eb753e1d3e75d84227bff9c365d 80 PIRSF PIRSF006488 1 78 1.1E-21 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 FORC55_1878 8a9d4eb753e1d3e75d84227bff9c365d 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 2.0E-14 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 FORC55_1878 8a9d4eb753e1d3e75d84227bff9c365d 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.747 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 FORC55_1878 8a9d4eb753e1d3e75d84227bff9c365d 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 8.1E-21 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 FORC55_1878 8a9d4eb753e1d3e75d84227bff9c365d 80 Gene3D G3DSA:1.10.287.1040 4 77 2.1E-23 T 17-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 FORC55_1878 8a9d4eb753e1d3e75d84227bff9c365d 80 SUPERFAMILY SSF116842 2 73 6.41E-21 T 17-10-2018 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 1.1E-155 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 Pfam PF01235 Sodium:alanine symporter family 54 449 2.2E-140 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 8.5E-52 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 8.5E-52 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 8.5E-52 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 8.5E-52 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 8.5E-52 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_1385 05b6d6252a8ddab232933778b988ba31 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 8.5E-52 T 17-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 FORC55_0942 6a4d32cbbb498eac8339c90c5e7e6431 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 2.3E-55 T 17-10-2018 IPR014094 Penicillin-binding protein activator LpoB FORC55_0942 6a4d32cbbb498eac8339c90c5e7e6431 196 Gene3D G3DSA:3.40.50.10610 39 188 4.4E-44 T 17-10-2018 FORC55_0942 6a4d32cbbb498eac8339c90c5e7e6431 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 2.8E-75 T 17-10-2018 IPR014094 Penicillin-binding protein activator LpoB FORC55_2757 d0d81e055b42fff0396442cf7e5b906a 416 Pfam PF04225 Opacity-associated protein A LysM-like domain 61 141 5.5E-7 T 17-10-2018 IPR007340 Opacity-associated protein A FORC55_2757 d0d81e055b42fff0396442cf7e5b906a 416 Gene3D G3DSA:3.10.450.350 54 146 1.7E-31 T 17-10-2018 FORC55_2757 d0d81e055b42fff0396442cf7e5b906a 416 Gene3D G3DSA:3.10.450.350 147 251 2.9E-34 T 17-10-2018 FORC55_2757 d0d81e055b42fff0396442cf7e5b906a 416 Pfam PF01551 Peptidase family M23 282 375 4.7E-33 T 17-10-2018 IPR016047 Peptidase M23 FORC55_2757 d0d81e055b42fff0396442cf7e5b906a 416 SUPERFAMILY SSF51261 131 377 3.82E-70 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_2757 d0d81e055b42fff0396442cf7e5b906a 416 Gene3D G3DSA:2.70.70.10 252 382 1.9E-51 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_1831 0824e9412cfccc6a244fb4f5c2f11b5f 416 Gene3D G3DSA:3.90.1150.10 10 394 1.0E-188 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_1831 0824e9412cfccc6a244fb4f5c2f11b5f 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 3.9E-184 T 17-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 FORC55_1831 0824e9412cfccc6a244fb4f5c2f11b5f 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.671 T 17-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 FORC55_1831 0824e9412cfccc6a244fb4f5c2f11b5f 416 SUPERFAMILY SSF53383 6 415 2.86E-185 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_1831 0824e9412cfccc6a244fb4f5c2f11b5f 416 Gene3D G3DSA:3.40.640.10 37 288 1.0E-188 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_1831 0824e9412cfccc6a244fb4f5c2f11b5f 416 PIRSF PIRSF000412 1 415 5.1E-170 T 17-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 FORC55_1831 0824e9412cfccc6a244fb4f5c2f11b5f 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 17-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 FORC55_0738 ba8f46076b3dfd85b399d48de986e1b9 175 SUPERFAMILY SSF52218 1 173 9.43E-34 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0738 ba8f46076b3dfd85b399d48de986e1b9 175 Pfam PF03358 NADPH-dependent FMN reductase 1 133 3.7E-23 T 17-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 FORC55_0738 ba8f46076b3dfd85b399d48de986e1b9 175 Gene3D G3DSA:3.40.50.360 1 175 9.6E-31 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_2594 0a3fab77f56ff8a640c30ac0f7e913f1 416 Pfam PF07804 HipA-like C-terminal domain 182 392 3.8E-51 T 17-10-2018 IPR012893 HipA-like, C-terminal FORC55_2594 0a3fab77f56ff8a640c30ac0f7e913f1 416 Pfam PF13657 HipA N-terminal domain 21 97 5.8E-5 T 17-10-2018 IPR017508 HipA, N-terminal subdomain 1 FORC55_2718 561912cfad1a763cfde6e09cc2834f65 504 SMART SM00283 245 503 2.4E-24 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2718 561912cfad1a763cfde6e09cc2834f65 504 SUPERFAMILY SSF58104 212 503 4.84E-53 T 17-10-2018 FORC55_2718 561912cfad1a763cfde6e09cc2834f65 504 Gene3D G3DSA:1.10.287.950 190 503 6.6E-53 T 17-10-2018 FORC55_2718 561912cfad1a763cfde6e09cc2834f65 504 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 367 6.5E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2718 561912cfad1a763cfde6e09cc2834f65 504 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 398 6.5E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2718 561912cfad1a763cfde6e09cc2834f65 504 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 6.5E-20 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 FORC55_2718 561912cfad1a763cfde6e09cc2834f65 504 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 309 461 5.1E-31 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 FORC55_2718 561912cfad1a763cfde6e09cc2834f65 504 SMART SM00304 190 244 1.3E-4 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 FORC55_1616 26dcf2881a1fb651ee1050c69522b030 189 Pfam PF00265 Thymidine kinase 2 183 2.3E-58 T 17-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 FORC55_1616 26dcf2881a1fb651ee1050c69522b030 189 Hamap MF_00124 Thymidine kinase [tdk]. 1 186 32.547 T 17-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 FORC55_1616 26dcf2881a1fb651ee1050c69522b030 189 SUPERFAMILY SSF57716 139 186 1.14E-16 T 17-10-2018 FORC55_1616 26dcf2881a1fb651ee1050c69522b030 189 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 170 183 - T 17-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 FORC55_1616 26dcf2881a1fb651ee1050c69522b030 189 PIRSF PIRSF035805 1 188 6.7E-56 T 17-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 FORC55_1616 26dcf2881a1fb651ee1050c69522b030 189 Gene3D G3DSA:3.30.60.20 141 186 4.3E-8 T 17-10-2018 FORC55_1616 26dcf2881a1fb651ee1050c69522b030 189 Gene3D G3DSA:3.40.50.300 1 137 5.5E-24 T 17-10-2018 FORC55_1616 26dcf2881a1fb651ee1050c69522b030 189 SUPERFAMILY SSF52540 1 138 1.15E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2545 88edf7c5985e3000a39b3f5ac2e013d3 398 Pfam PF04932 O-Antigen ligase 172 328 4.1E-16 T 17-10-2018 IPR007016 O-antigen ligase-related FORC55_3523 72efea702cc26a8c6669c735591a5cbb 311 Gene3D G3DSA:3.40.630.10 4 308 1.4E-119 T 17-10-2018 FORC55_3523 72efea702cc26a8c6669c735591a5cbb 311 SUPERFAMILY SSF53187 36 303 3.04E-37 T 17-10-2018 FORC55_3523 72efea702cc26a8c6669c735591a5cbb 311 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 176 1.9E-6 T 17-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 FORC55_3319 10642420bd0f40c48eea3688b25dd191 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 4.1E-50 T 17-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB FORC55_3319 10642420bd0f40c48eea3688b25dd191 151 PIRSF PIRSF006105 1 151 1.2E-47 T 17-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB FORC55_3319 10642420bd0f40c48eea3688b25dd191 151 SUPERFAMILY SSF48695 34 148 1.82E-41 T 17-10-2018 IPR036280 Multiheme cytochrome superfamily FORC55_3319 10642420bd0f40c48eea3688b25dd191 151 Gene3D G3DSA:1.10.1130.10 65 132 3.0E-29 T 17-10-2018 FORC55_3382 20fb8a1e6f6380e996089e59af46aa00 362 SUPERFAMILY SSF53901 7 325 4.24E-64 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_3382 20fb8a1e6f6380e996089e59af46aa00 362 Gene3D G3DSA:3.40.47.10 1 362 6.6E-162 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 FORC55_3382 20fb8a1e6f6380e996089e59af46aa00 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.1E-34 T 17-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 FORC55_3382 20fb8a1e6f6380e996089e59af46aa00 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 63.917 T 17-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 FORC55_3382 20fb8a1e6f6380e996089e59af46aa00 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 8.1E-108 T 17-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 FORC55_3382 20fb8a1e6f6380e996089e59af46aa00 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 4.3E-28 T 17-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 FORC55_2273 2b41f95b9bdacebe75037d3ee0231aa8 376 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2273 2b41f95b9bdacebe75037d3ee0231aa8 376 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 1.3E-115 T 17-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 FORC55_2273 2b41f95b9bdacebe75037d3ee0231aa8 376 Gene3D G3DSA:3.40.50.300 2 290 5.3E-79 T 17-10-2018 FORC55_2273 2b41f95b9bdacebe75037d3ee0231aa8 376 Pfam PF12857 TOBE-like domain 288 345 1.8E-14 T 17-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 FORC55_2273 2b41f95b9bdacebe75037d3ee0231aa8 376 Pfam PF00005 ABC transporter 19 164 2.1E-36 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2273 2b41f95b9bdacebe75037d3ee0231aa8 376 SUPERFAMILY SSF52540 3 246 1.18E-86 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2273 2b41f95b9bdacebe75037d3ee0231aa8 376 SMART SM00382 27 214 1.5E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2273 2b41f95b9bdacebe75037d3ee0231aa8 376 SUPERFAMILY SSF50331 240 345 4.02E-5 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_2440 463d689b58e8e2877763e31b033890de 572 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 168 387 3.6E-49 T 17-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 FORC55_2440 463d689b58e8e2877763e31b033890de 572 Gene3D G3DSA:3.40.630.40 155 396 2.4E-69 T 17-10-2018 FORC55_2440 463d689b58e8e2877763e31b033890de 572 SUPERFAMILY SSF54106 473 517 9.16E-9 T 17-10-2018 FORC55_2440 463d689b58e8e2877763e31b033890de 572 Gene3D G3DSA:3.10.350.10 404 456 6.9E-15 T 17-10-2018 IPR036779 LysM domain superfamily FORC55_2440 463d689b58e8e2877763e31b033890de 572 Gene3D G3DSA:3.10.350.10 526 572 1.8E-15 T 17-10-2018 IPR036779 LysM domain superfamily FORC55_2440 463d689b58e8e2877763e31b033890de 572 SMART SM00257 408 451 3.2E-12 T 17-10-2018 IPR018392 LysM domain FORC55_2440 463d689b58e8e2877763e31b033890de 572 SMART SM00257 527 570 4.3E-14 T 17-10-2018 IPR018392 LysM domain FORC55_2440 463d689b58e8e2877763e31b033890de 572 SMART SM00257 474 517 1.3E-12 T 17-10-2018 IPR018392 LysM domain FORC55_2440 463d689b58e8e2877763e31b033890de 572 Gene3D G3DSA:2.60.40.3500 22 135 3.2E-25 T 17-10-2018 FORC55_2440 463d689b58e8e2877763e31b033890de 572 SUPERFAMILY SSF54106 408 451 1.31E-9 T 17-10-2018 FORC55_2440 463d689b58e8e2877763e31b033890de 572 Pfam PF01476 LysM domain 475 517 1.2E-9 T 17-10-2018 IPR018392 LysM domain FORC55_2440 463d689b58e8e2877763e31b033890de 572 Pfam PF01476 LysM domain 409 451 1.4E-10 T 17-10-2018 IPR018392 LysM domain FORC55_2440 463d689b58e8e2877763e31b033890de 572 Pfam PF01476 LysM domain 528 570 1.0E-12 T 17-10-2018 IPR018392 LysM domain FORC55_2440 463d689b58e8e2877763e31b033890de 572 Pfam PF11741 AMIN domain 31 132 2.9E-17 T 17-10-2018 IPR021731 AMIN domain FORC55_2440 463d689b58e8e2877763e31b033890de 572 SUPERFAMILY SSF53187 166 390 5.02E-52 T 17-10-2018 FORC55_2440 463d689b58e8e2877763e31b033890de 572 Gene3D G3DSA:3.10.350.10 463 524 1.6E-13 T 17-10-2018 IPR036779 LysM domain superfamily FORC55_2440 463d689b58e8e2877763e31b033890de 572 SUPERFAMILY SSF54106 527 570 1.96E-10 T 17-10-2018 FORC55_2440 463d689b58e8e2877763e31b033890de 572 SMART SM00646 228 387 2.9E-68 T 17-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 FORC55_2689 da6405f7260367d0f5c1a46a741918f9 248 Gene3D G3DSA:3.40.190.10 91 203 6.4E-28 T 17-10-2018 FORC55_2689 da6405f7260367d0f5c1a46a741918f9 248 SMART SM00062 24 245 1.9E-71 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_2689 da6405f7260367d0f5c1a46a741918f9 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 17-10-2018 IPR018313 Solute-binding protein family 3, conserved site FORC55_2689 da6405f7260367d0f5c1a46a741918f9 248 SUPERFAMILY SSF53850 1 246 2.33E-58 T 17-10-2018 FORC55_2689 da6405f7260367d0f5c1a46a741918f9 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 3.3E-56 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_2147 2745d9e4726f5f3ff4ec6c2fa767a909 170 Pfam PF13508 Acetyltransferase (GNAT) domain 42 146 1.0E-9 T 17-10-2018 IPR000182 GNAT domain FORC55_2147 2745d9e4726f5f3ff4ec6c2fa767a909 170 SUPERFAMILY SSF55729 17 147 2.13E-13 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2147 2745d9e4726f5f3ff4ec6c2fa767a909 170 Gene3D G3DSA:3.40.630.30 2 159 3.1E-45 T 17-10-2018 FORC55_0329 8f0b66c1a9e77fa9a55e68e85483a970 419 Pfam PF12704 MacB-like periplasmic core domain 20 259 1.5E-11 T 17-10-2018 IPR025857 MacB-like periplasmic core domain FORC55_0329 8f0b66c1a9e77fa9a55e68e85483a970 419 Pfam PF02687 FtsX-like permease family 317 410 6.0E-9 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 FORC55_2852 820616577c97a49656314f4a757d09e3 310 SUPERFAMILY SSF53300 90 234 1.78E-6 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily FORC55_2852 820616577c97a49656314f4a757d09e3 310 Pfam PF01882 Protein of unknown function DUF58 54 138 2.0E-24 T 17-10-2018 IPR002881 Domain of unknown function DUF58 FORC55_0446 95b4cc107c5e15c776690c29cc5cace3 65 SUPERFAMILY SSF57716 5 63 1.07E-21 T 17-10-2018 FORC55_0446 95b4cc107c5e15c776690c29cc5cace3 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.592 T 17-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 FORC55_0446 95b4cc107c5e15c776690c29cc5cace3 65 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 1.5E-24 T 17-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 FORC55_0446 95b4cc107c5e15c776690c29cc5cace3 65 Gene3D G3DSA:3.30.50.10 1 65 1.7E-24 T 17-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 FORC55_0965 c3523e4d7bc8ea8dbc16d239ce19d8b5 220 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 204 3.2E-7 T 17-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 FORC55_2555 2f208475aa85ba7910f48c0ae1f26ae6 664 Pfam PF01757 Acyltransferase family 7 334 1.1E-23 T 17-10-2018 IPR002656 Acyltransferase 3 GO:0016747 FORC55_2555 2f208475aa85ba7910f48c0ae1f26ae6 664 Gene3D G3DSA:3.40.50.1110 522 664 4.5E-8 T 17-10-2018 IPR036514 SGNH hydrolase superfamily FORC55_2555 2f208475aa85ba7910f48c0ae1f26ae6 664 SUPERFAMILY SSF52266 470 660 1.34E-8 T 17-10-2018 FORC55_1688 7bf0f638bcf9da2c3bcc904512cbd757 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 1.0E-26 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_1688 7bf0f638bcf9da2c3bcc904512cbd757 330 Pfam PF00005 ABC transporter 38 189 1.1E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_1688 7bf0f638bcf9da2c3bcc904512cbd757 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 1.9E-19 T 17-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 FORC55_1688 7bf0f638bcf9da2c3bcc904512cbd757 330 SUPERFAMILY SSF52540 9 261 2.3E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1688 7bf0f638bcf9da2c3bcc904512cbd757 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_1688 7bf0f638bcf9da2c3bcc904512cbd757 330 Gene3D G3DSA:3.40.50.300 6 330 6.7E-97 T 17-10-2018 FORC55_1688 7bf0f638bcf9da2c3bcc904512cbd757 330 SMART SM00382 46 239 1.2E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 242 535 2.1E-108 T 17-10-2018 IPR013358 Pilus biogenesis, MshL FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 SMART SM00965 93 141 1.3E-5 T 17-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 355 379 1.3E-17 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 500 518 1.3E-17 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 277 287 1.3E-17 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 523 537 1.3E-17 T 17-10-2018 IPR001775 GspD/PilQ family FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 Pfam PF00263 Bacterial type II and III secretion system protein 360 535 6.1E-41 T 17-10-2018 IPR004846 Type II/III secretion system GO:0009306 FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 Pfam PF07655 Secretin N-terminal domain 145 248 2.3E-24 T 17-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 FORC55_2387 a7c6c1a3ea8eadfe134672ec8ddc3135 559 Gene3D G3DSA:3.55.50.30 51 145 7.6E-10 T 17-10-2018 FORC55_1945 bee43b8bf26e0ea7e7023e2846efe520 119 SUPERFAMILY SSF55021 1 52 8.24E-14 T 17-10-2018 FORC55_1945 bee43b8bf26e0ea7e7023e2846efe520 119 Gene3D G3DSA:3.30.2130.10 1 119 3.1E-42 T 17-10-2018 FORC55_1945 bee43b8bf26e0ea7e7023e2846efe520 119 Pfam PF10000 ACT domain 1 55 1.6E-18 T 17-10-2018 IPR018717 Domain of unknown function DUF2241 FORC55_1945 bee43b8bf26e0ea7e7023e2846efe520 119 SUPERFAMILY SSF55021 57 115 1.68E-19 T 17-10-2018 FORC55_1945 bee43b8bf26e0ea7e7023e2846efe520 119 Pfam PF13840 ACT domain 59 113 7.0E-13 T 17-10-2018 IPR027795 CASTOR, ACT domain FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 SUPERFAMILY SSF52540 22 261 7.42E-86 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 Gene3D G3DSA:2.40.50.140 300 334 7.4E-13 T 17-10-2018 FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 Pfam PF00005 ABC transporter 37 179 7.3E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 SMART SM00382 46 229 3.6E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 Gene3D G3DSA:2.40.50.940 240 299 7.4E-13 T 17-10-2018 FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 19 371 2.5E-153 T 17-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 Gene3D G3DSA:3.40.50.300 21 239 2.6E-68 T 17-10-2018 FORC55_3237 1b4cfe6f983148b0d768590db34bd555 390 SUPERFAMILY SSF50331 255 370 3.12E-9 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal FORC55_0450 52950c82944626bb2ef58e2577886512 408 Gene3D G3DSA:1.20.81.30 60 175 3.7E-29 T 17-10-2018 FORC55_0450 52950c82944626bb2ef58e2577886512 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 17-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 FORC55_0450 52950c82944626bb2ef58e2577886512 408 Gene3D G3DSA:1.20.81.30 260 371 4.3E-27 T 17-10-2018 FORC55_0450 52950c82944626bb2ef58e2577886512 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 2.0E-27 T 17-10-2018 IPR018076 Type II secretion system F domain FORC55_0450 52950c82944626bb2ef58e2577886512 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 3.1E-31 T 17-10-2018 IPR018076 Type II secretion system F domain FORC55_0450 52950c82944626bb2ef58e2577886512 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 5.6E-20 T 17-10-2018 IPR003004 GspF/PilC family FORC55_0450 52950c82944626bb2ef58e2577886512 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 5.6E-20 T 17-10-2018 IPR003004 GspF/PilC family FORC55_0450 52950c82944626bb2ef58e2577886512 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 5.6E-20 T 17-10-2018 IPR003004 GspF/PilC family FORC55_0450 52950c82944626bb2ef58e2577886512 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 5.6E-20 T 17-10-2018 IPR003004 GspF/PilC family FORC55_2368 7b8015a73e90ac81d2bca272de6c1b3d 275 Gene3D G3DSA:3.60.110.10 1 269 1.3E-86 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily FORC55_2368 7b8015a73e90ac81d2bca272de6c1b3d 275 SUPERFAMILY SSF56317 3 263 1.83E-77 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily FORC55_2368 7b8015a73e90ac81d2bca272de6c1b3d 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 17-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site FORC55_2368 7b8015a73e90ac81d2bca272de6c1b3d 275 Pfam PF00795 Carbon-nitrogen hydrolase 3 253 3.8E-50 T 17-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 FORC55_0441 42db0f0c8bceea6eb7ef8cfd934b9077 148 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.7E-41 T 17-10-2018 IPR009659 Protein of unknown function DUF1249 FORC55_1873 9041d327478574aae607bafcf3b697bf 128 Pfam PF04241 Protein of unknown function (DUF423) 20 110 1.8E-31 T 17-10-2018 IPR006696 Protein of unknown function DUF423 FORC55_1577 58841e433481c08fa24eb50cb6775dbf 315 SUPERFAMILY SSF56935 26 281 2.38E-5 T 17-10-2018 FORC55_1577 58841e433481c08fa24eb50cb6775dbf 315 Pfam PF11383 Protein of unknown function (DUF3187) 4 314 3.6E-126 T 17-10-2018 IPR021523 Protein of unknown function DUF3187 FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 314 2.7E-116 T 17-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 SUPERFAMILY SSF53697 7 319 8.01E-70 T 17-10-2018 FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 PIRSF PIRSF004692 1 324 1.8E-131 T 17-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 Pfam PF01380 SIS domain 42 173 7.2E-32 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 SMART SM00116 211 259 2.3 T 17-10-2018 IPR000644 CBS domain FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 SMART SM00116 276 323 0.53 T 17-10-2018 IPR000644 CBS domain FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 Pfam PF00571 CBS domain 205 259 1.1E-4 T 17-10-2018 IPR000644 CBS domain FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 Pfam PF00571 CBS domain 270 321 6.0E-6 T 17-10-2018 IPR000644 CBS domain FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 Gene3D G3DSA:3.10.580.10 197 321 1.6E-43 T 17-10-2018 FORC55_0357 8e4e368fd356832761b0ac6463d32548 324 Gene3D G3DSA:3.40.50.10490 6 196 6.0E-66 T 17-10-2018 FORC55_2601 ea5e358552f126d98784c84761c44449 346 SUPERFAMILY SSF56935 21 344 2.02E-40 T 17-10-2018 FORC55_2601 ea5e358552f126d98784c84761c44449 346 Gene3D G3DSA:2.40.160.10 18 346 4.2E-33 T 17-10-2018 IPR023614 Porin domain superfamily FORC55_2324 d442b3ed73aff17caa67e159a78f090c 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 215 231 1.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2324 d442b3ed73aff17caa67e159a78f090c 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 231 243 1.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2324 d442b3ed73aff17caa67e159a78f090c 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 215 1.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2324 d442b3ed73aff17caa67e159a78f090c 265 Pfam PF00196 Bacterial regulatory proteins, luxR family 200 254 3.8E-15 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2324 d442b3ed73aff17caa67e159a78f090c 265 Gene3D G3DSA:1.10.10.10 142 262 1.4E-18 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2324 d442b3ed73aff17caa67e159a78f090c 265 SMART SM00421 198 255 3.1E-18 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 FORC55_2324 d442b3ed73aff17caa67e159a78f090c 265 SUPERFAMILY SSF46894 186 258 4.76E-18 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 FORC55_2142 584c21ef6331148c6cae6118ab5a2391 170 Gene3D G3DSA:2.10.109.10 69 170 8.6E-14 T 17-10-2018 FORC55_2142 584c21ef6331148c6cae6118ab5a2391 170 SUPERFAMILY SSF51306 70 170 9.94E-18 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily FORC55_2142 584c21ef6331148c6cae6118ab5a2391 170 Pfam PF10502 Signal peptidase, peptidase S26 80 170 4.0E-15 T 17-10-2018 IPR019533 Peptidase S26 FORC55_2142 584c21ef6331148c6cae6118ab5a2391 170 ProSitePatterns PS00760 Signal peptidases I lysine active site. 87 99 - T 17-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 FORC55_0416 b4906fef6f4b81919d090053df955c89 241 SUPERFAMILY SSF50249 6 76 1.28E-15 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold FORC55_0416 b4906fef6f4b81919d090053df955c89 241 Hamap MF_00201 DNA repair protein RecO [recO]. 2 231 23.35 T 17-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 FORC55_0416 b4906fef6f4b81919d090053df955c89 241 SUPERFAMILY SSF57863 86 159 1.94E-13 T 17-10-2018 IPR037278 ARFGAP/RecO-like zinc finger FORC55_0416 b4906fef6f4b81919d090053df955c89 241 Gene3D G3DSA:2.40.50.140 2 79 7.8E-34 T 17-10-2018 FORC55_0416 b4906fef6f4b81919d090053df955c89 241 Pfam PF11967 Recombination protein O N terminal 5 77 2.2E-24 T 17-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal FORC55_0416 b4906fef6f4b81919d090053df955c89 241 Gene3D G3DSA:1.20.1440.120 80 239 1.9E-52 T 17-10-2018 FORC55_0416 b4906fef6f4b81919d090053df955c89 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 230 1.1E-42 T 17-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 FORC55_0416 b4906fef6f4b81919d090053df955c89 241 Pfam PF02565 Recombination protein O C terminal 85 226 5.7E-25 T 17-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 FORC55_2023 d8e0c43f9765d133ed400130dfd381cf 466 Gene3D G3DSA:2.40.30.10 367 453 5.8E-9 T 17-10-2018 FORC55_2023 d8e0c43f9765d133ed400130dfd381cf 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 17-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 FORC55_2023 d8e0c43f9765d133ed400130dfd381cf 466 Pfam PF01136 Peptidase family U32 80 355 1.2E-96 T 17-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 FORC55_2023 d8e0c43f9765d133ed400130dfd381cf 466 Pfam PF16325 Peptidase family U32 C-terminal domain 371 452 1.1E-20 T 17-10-2018 IPR032525 Peptidase family U32, C-terminal FORC55_3282 f38299b8f3f03ef069b3d2fe551fad21 217 Gene3D G3DSA:3.40.109.10 1 217 5.4E-56 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 FORC55_3282 f38299b8f3f03ef069b3d2fe551fad21 217 SUPERFAMILY SSF55469 1 216 4.19E-61 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 FORC55_3282 f38299b8f3f03ef069b3d2fe551fad21 217 Pfam PF00881 Nitroreductase family 9 192 9.9E-27 T 17-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 FORC55_1483 df316fc26af9c15cdbe62798c4ee9969 292 SUPERFAMILY SSF103481 48 133 5.49E-5 T 17-10-2018 FORC55_1483 df316fc26af9c15cdbe62798c4ee9969 292 SUPERFAMILY SSF103481 182 280 5.62E-10 T 17-10-2018 FORC55_1483 df316fc26af9c15cdbe62798c4ee9969 292 Pfam PF00892 EamA-like transporter family 146 276 4.8E-16 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_0245 5eef3a128bfb8287989437c9859daaba 84 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 1.1E-36 T 17-10-2018 IPR022072 Protein of unknown function DUF3624 FORC55_1877 895ab9dedd0deb5a06e046605d7c4727 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 17-10-2018 IPR000540 Flagellar motor protein MotA, conserved site FORC55_1877 895ab9dedd0deb5a06e046605d7c4727 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 5.3E-21 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel FORC55_3277 017e26b811fd7657e8bb8350dae0881b 163 Gene3D G3DSA:3.90.79.10 15 144 3.0E-22 T 17-10-2018 FORC55_3277 017e26b811fd7657e8bb8350dae0881b 163 Pfam PF00293 NUDIX domain 25 122 6.1E-14 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_3277 017e26b811fd7657e8bb8350dae0881b 163 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 FORC55_3277 017e26b811fd7657e8bb8350dae0881b 163 SUPERFAMILY SSF55811 10 123 4.06E-26 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_3277 017e26b811fd7657e8bb8350dae0881b 163 PRINTS PR00502 NUDIX hydrolase family signature 48 62 4.4E-5 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 FORC55_3277 017e26b811fd7657e8bb8350dae0881b 163 PRINTS PR00502 NUDIX hydrolase family signature 62 77 4.4E-5 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 FORC55_3161 81ed9343b7bf639b6ddd9fcbbebdbbac 195 Gene3D G3DSA:3.40.640.10 8 92 1.3E-68 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_3161 81ed9343b7bf639b6ddd9fcbbebdbbac 195 Gene3D G3DSA:3.90.1150.10 93 184 1.3E-68 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_3161 81ed9343b7bf639b6ddd9fcbbebdbbac 195 SUPERFAMILY SSF53383 7 187 2.92E-35 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_3161 81ed9343b7bf639b6ddd9fcbbebdbbac 195 Pfam PF00155 Aminotransferase class I and II 8 181 2.0E-11 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 FORC55_3011 ad184f4398dfc98c8f2d4693e4a516af 68 Pfam PF04875 Protein of unknown function, DUF645 2 57 1.6E-9 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_0827 0e33064fc8e979198324bc6dcfd7c12b 212 Pfam PF02223 Thymidylate kinase 8 198 3.5E-58 T 17-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 FORC55_0827 0e33064fc8e979198324bc6dcfd7c12b 212 SUPERFAMILY SSF52540 1 209 7.94E-53 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0827 0e33064fc8e979198324bc6dcfd7c12b 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 17-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 FORC55_0827 0e33064fc8e979198324bc6dcfd7c12b 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.951 T 17-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 FORC55_0827 0e33064fc8e979198324bc6dcfd7c12b 212 Gene3D G3DSA:3.40.50.300 3 212 5.5E-67 T 17-10-2018 FORC55_0827 0e33064fc8e979198324bc6dcfd7c12b 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 5.3E-62 T 17-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 FORC55_2723 5a83a813ceb1db8d8803a5b13da812eb 250 SUPERFAMILY SSF48317 13 241 3.27E-27 T 17-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily FORC55_2723 5a83a813ceb1db8d8803a5b13da812eb 250 Gene3D G3DSA:1.20.144.10 8 243 3.6E-50 T 17-10-2018 FORC55_2723 5a83a813ceb1db8d8803a5b13da812eb 250 Pfam PF01569 PAP2 superfamily 86 233 3.0E-21 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase FORC55_2723 5a83a813ceb1db8d8803a5b13da812eb 250 SMART SM00014 85 230 8.9E-18 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase FORC55_1229 9873c246d3ead1d13194b7be7d9374d0 476 SUPERFAMILY SSF56954 2 449 1.57E-66 T 17-10-2018 FORC55_1229 9873c246d3ead1d13194b7be7d9374d0 476 Pfam PF02321 Outer membrane efflux protein 269 449 2.2E-24 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_1229 9873c246d3ead1d13194b7be7d9374d0 476 Pfam PF02321 Outer membrane efflux protein 26 247 2.9E-22 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 FORC55_2209 c3f33ed4ed638cd22ef348676cf70ed1 801 Gene3D G3DSA:2.60.420.10 723 801 9.5E-31 T 17-10-2018 FORC55_2209 c3f33ed4ed638cd22ef348676cf70ed1 801 SMART SM01068 1 63 9.9E-19 T 17-10-2018 IPR009342 Putative carbohydrate binding domain FORC55_2209 c3f33ed4ed638cd22ef348676cf70ed1 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 727 7.0E-212 T 17-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain FORC55_2209 c3f33ed4ed638cd22ef348676cf70ed1 801 SUPERFAMILY SSF48208 273 800 3.61E-109 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 FORC55_2209 c3f33ed4ed638cd22ef348676cf70ed1 801 SUPERFAMILY SSF74650 1 269 7.53E-80 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 FORC55_2209 c3f33ed4ed638cd22ef348676cf70ed1 801 Gene3D G3DSA:1.50.10.10 311 722 3.3E-131 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 FORC55_2209 c3f33ed4ed638cd22ef348676cf70ed1 801 Gene3D G3DSA:2.70.98.40 1 302 2.2E-114 T 17-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily FORC55_2209 c3f33ed4ed638cd22ef348676cf70ed1 801 Pfam PF06165 Glycosyltransferase family 36 21 267 1.9E-84 T 17-10-2018 IPR010383 Glycosyl hydrolase 94 FORC55_2511 02430763ab04525f9e343ccba9bda861 195 Pfam PF04222 Protein of unknown function (DUF416) 6 194 6.3E-77 T 17-10-2018 IPR007338 Protein of unknown function DUF416 FORC55_2511 02430763ab04525f9e343ccba9bda861 195 Gene3D G3DSA:1.20.1590.10 2 195 6.9E-65 T 17-10-2018 IPR023381 YP001051499.1-like domain superfamily FORC55_1412 f8ad4116def07cba2237c3107760d975 450 SUPERFAMILY SSF53067 207 447 5.66E-29 T 17-10-2018 FORC55_1412 f8ad4116def07cba2237c3107760d975 450 SUPERFAMILY SSF53067 1 205 6.48E-27 T 17-10-2018 FORC55_1412 f8ad4116def07cba2237c3107760d975 450 Gene3D G3DSA:3.30.420.40 379 433 8.1E-9 T 17-10-2018 FORC55_1412 f8ad4116def07cba2237c3107760d975 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 FORC55_1412 f8ad4116def07cba2237c3107760d975 450 Pfam PF00012 Hsp70 protein 129 259 5.2E-11 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 FORC55_1412 f8ad4116def07cba2237c3107760d975 450 Gene3D G3DSA:3.90.640.10 336 378 8.1E-9 T 17-10-2018 FORC55_2971 992991fd2a64144e1ebbdd4825e917b5 183 Gene3D G3DSA:2.60.40.420 66 183 6.6E-19 T 17-10-2018 IPR008972 Cupredoxin FORC55_2971 992991fd2a64144e1ebbdd4825e917b5 183 SUPERFAMILY SSF49503 73 181 2.01E-23 T 17-10-2018 IPR008972 Cupredoxin FORC55_1202 8944e4d03b579547f5a4ea2cd0bf1565 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 395 7.7E-119 T 17-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 FORC55_1202 8944e4d03b579547f5a4ea2cd0bf1565 401 SUPERFAMILY SSF103473 9 399 1.57E-65 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_1202 8944e4d03b579547f5a4ea2cd0bf1565 401 Pfam PF07690 Major Facilitator Superfamily 25 365 1.5E-49 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_1202 8944e4d03b579547f5a4ea2cd0bf1565 401 Gene3D G3DSA:1.20.1720.10 18 396 2.1E-100 T 17-10-2018 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.7E-115 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 Gene3D G3DSA:3.40.50.1370 135 292 3.3E-120 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 Gene3D G3DSA:3.40.50.1370 8 304 3.3E-120 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.7E-33 T 17-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.2E-35 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.2E-35 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.2E-35 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.2E-35 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.2E-35 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.2E-35 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 SUPERFAMILY SSF53671 4 306 2.75E-101 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 8.2E-26 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 8.2E-26 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 8.2E-26 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 8.2E-26 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.1E-43 T 17-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 FORC55_0369 eafbe65a5d0a1f62fabdc5dab5bb99c0 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.489 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 FORC55_2230 09e3dd8a66b0e4799c55b4c0aad18dea 305 SUPERFAMILY SSF52540 3 230 7.99E-63 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2230 09e3dd8a66b0e4799c55b4c0aad18dea 305 Pfam PF00005 ABC transporter 20 164 1.1E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_2230 09e3dd8a66b0e4799c55b4c0aad18dea 305 Gene3D G3DSA:3.40.50.300 1 234 4.5E-66 T 17-10-2018 FORC55_2230 09e3dd8a66b0e4799c55b4c0aad18dea 305 SMART SM00382 29 212 9.8E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2230 09e3dd8a66b0e4799c55b4c0aad18dea 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 FORC55_2825 1f4ff17492367c447021428634f5b491 1247 Gene3D G3DSA:3.30.160.280 1102 1173 1.5E-5 T 17-10-2018 FORC55_2825 1f4ff17492367c447021428634f5b491 1247 Gene3D G3DSA:3.30.160.280 1014 1079 4.4E-15 T 17-10-2018 FORC55_2825 1f4ff17492367c447021428634f5b491 1247 Gene3D G3DSA:3.30.160.280 1186 1247 1.6E-12 T 17-10-2018 FORC55_2825 1f4ff17492367c447021428634f5b491 1247 Gene3D G3DSA:2.60.40.10 164 255 8.2E-6 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_2825 1f4ff17492367c447021428634f5b491 1247 Pfam PF10462 Peptidase M66 352 657 1.1E-97 T 17-10-2018 IPR019503 Peptidase M66 domain GO:0004222 FORC55_2825 1f4ff17492367c447021428634f5b491 1247 Pfam PF12561 ToxR activated gene A lipoprotein 723 856 5.3E-60 T 17-10-2018 IPR022218 ToxR activated gene A lipoprotein FORC55_2533 564f0ceeb62a1d297b2ffdef79eb7e0d 353 SUPERFAMILY SSF51569 3 302 3.79E-96 T 17-10-2018 FORC55_2533 564f0ceeb62a1d297b2ffdef79eb7e0d 353 Pfam PF03102 NeuB family 37 275 1.0E-90 T 17-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 FORC55_2533 564f0ceeb62a1d297b2ffdef79eb7e0d 353 Pfam PF08666 SAF domain 291 342 8.9E-7 T 17-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 FORC55_2533 564f0ceeb62a1d297b2ffdef79eb7e0d 353 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 17 341 3.3E-152 T 17-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 FORC55_2533 564f0ceeb62a1d297b2ffdef79eb7e0d 353 SMART SM00858 290 348 1.3E-5 T 17-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 FORC55_2533 564f0ceeb62a1d297b2ffdef79eb7e0d 353 Gene3D G3DSA:3.20.20.70 3 276 1.9E-94 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 FORC55_2533 564f0ceeb62a1d297b2ffdef79eb7e0d 353 SUPERFAMILY SSF51269 286 347 1.57E-15 T 17-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 FORC55_2533 564f0ceeb62a1d297b2ffdef79eb7e0d 353 Gene3D G3DSA:3.90.1210.10 291 349 4.6E-16 T 17-10-2018 FORC55_2834 a98b0c7d55299ac5f2558e1982d8cf21 158 Pfam PF01899 Na+/H+ ion antiporter subunit 7 155 7.3E-41 T 17-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 FORC55_2834 a98b0c7d55299ac5f2558e1982d8cf21 158 PIRSF PIRSF019239 1 158 1.3E-43 T 17-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 FORC55_1140 f2c1afd5c5fc7f74f678a638ebd9b041 215 Gene3D G3DSA:3.40.50.620 17 153 3.8E-29 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_1140 f2c1afd5c5fc7f74f678a638ebd9b041 215 Pfam PF02698 DUF218 domain 26 147 7.7E-25 T 17-10-2018 IPR003848 Domain of unknown function DUF218 FORC55_1009 b995f41253838462cffcf712d7e81319 71 Gene3D G3DSA:1.10.720.30 13 70 1.1E-31 T 17-10-2018 IPR036361 SAP domain superfamily FORC55_1009 b995f41253838462cffcf712d7e81319 71 Pfam PF09905 DNA-binding protein VF530 6 67 8.4E-36 T 17-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 Gene3D G3DSA:3.40.190.10 37 274 7.6E-72 T 17-10-2018 FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 SUPERFAMILY SSF53850 44 278 2.31E-36 T 17-10-2018 FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 486 49.01 T 17-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 278 2.1E-32 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 Gene3D G3DSA:3.40.190.10 128 235 7.6E-72 T 17-10-2018 FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 Gene3D G3DSA:1.10.530.10 283 461 1.1E-36 T 17-10-2018 FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 SMART SM00062 43 279 7.4E-30 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 320 348 - T 17-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 Pfam PF01464 Transglycosylase SLT domain 310 412 4.7E-22 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 FORC55_1899 da087e2a251724672db9ba9fea4f0d2a 530 SUPERFAMILY SSF53955 257 461 8.44E-39 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily FORC55_2029 ffb9938bdb330e2cb9aab5664d4fad94 240 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 237 1.4E-75 T 17-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase FORC55_2029 ffb9938bdb330e2cb9aab5664d4fad94 240 SUPERFAMILY SSF64438 2 239 1.61E-85 T 17-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic FORC55_2029 ffb9938bdb330e2cb9aab5664d4fad94 240 Gene3D G3DSA:3.60.140.10 1 240 7.4E-91 T 17-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily FORC55_2029 ffb9938bdb330e2cb9aab5664d4fad94 240 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 238 1.8E-62 T 17-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase FORC55_0276 1c76ab4462d702586435ee4ade80d402 193 Pfam PF02525 Flavodoxin-like fold 10 177 2.1E-43 T 17-10-2018 IPR003680 Flavodoxin-like fold FORC55_0276 1c76ab4462d702586435ee4ade80d402 193 SUPERFAMILY SSF52218 10 183 2.07E-48 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0276 1c76ab4462d702586435ee4ade80d402 193 Gene3D G3DSA:3.40.50.360 9 187 9.3E-54 T 17-10-2018 IPR029039 Flavoprotein-like superfamily FORC55_0276 1c76ab4462d702586435ee4ade80d402 193 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 187 47.728 T 17-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 FORC55_2981 104e102ddb5d3ffbabab66b70812f079 115 SUPERFAMILY SSF47413 3 83 5.07E-19 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2981 104e102ddb5d3ffbabab66b70812f079 115 Gene3D G3DSA:1.10.260.40 2 89 2.7E-13 T 17-10-2018 FORC55_1250 70faa1c0f008ea28082b43b0d02d50ce 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 252 2.3E-20 T 17-10-2018 FORC55_1250 70faa1c0f008ea28082b43b0d02d50ce 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 137 158 2.3E-20 T 17-10-2018 FORC55_1250 70faa1c0f008ea28082b43b0d02d50ce 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 204 225 2.3E-20 T 17-10-2018 FORC55_1250 70faa1c0f008ea28082b43b0d02d50ce 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 62 87 2.3E-20 T 17-10-2018 FORC55_1250 70faa1c0f008ea28082b43b0d02d50ce 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 293 305 2.3E-20 T 17-10-2018 FORC55_1250 70faa1c0f008ea28082b43b0d02d50ce 516 Pfam PF00361 Proton-conducting membrane transporter 113 333 2.2E-42 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2214 b456e56c39c09e157d4c86b107df9226 409 SUPERFAMILY SSF111352 12 383 2.48E-105 T 17-10-2018 FORC55_2214 b456e56c39c09e157d4c86b107df9226 409 Gene3D G3DSA:1.10.3430.10 2 408 1.6E-119 T 17-10-2018 IPR029020 Ammonium/urea transporter FORC55_2214 b456e56c39c09e157d4c86b107df9226 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 5.1E-205 T 17-10-2018 IPR019879 Ammonium transporter, marine subtype FORC55_2214 b456e56c39c09e157d4c86b107df9226 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 17-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 FORC55_2214 b456e56c39c09e157d4c86b107df9226 409 Pfam PF00909 Ammonium Transporter Family 18 402 6.9E-101 T 17-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 FORC55_2110 6ff600f35d2bd64d1aa3023337c0ea34 319 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 219 311 3.9E-23 T 17-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal FORC55_2110 6ff600f35d2bd64d1aa3023337c0ea34 319 SMART SM00382 62 216 0.0025 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_2110 6ff600f35d2bd64d1aa3023337c0ea34 319 SUPERFAMILY SSF52540 31 284 4.83E-30 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2110 6ff600f35d2bd64d1aa3023337c0ea34 319 Pfam PF07728 AAA domain (dynein-related subfamily) 67 186 2.4E-19 T 17-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 FORC55_2110 6ff600f35d2bd64d1aa3023337c0ea34 319 Gene3D G3DSA:3.40.50.300 47 223 5.0E-26 T 17-10-2018 FORC55_1853 1cb6419586e18af62ff5a0201ee0990b 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 148 3.0E-6 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_1853 1cb6419586e18af62ff5a0201ee0990b 184 Gene3D G3DSA:2.160.10.10 70 178 2.0E-27 T 17-10-2018 FORC55_1853 1cb6419586e18af62ff5a0201ee0990b 184 SUPERFAMILY SSF51161 35 167 3.05E-30 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_2338 a3795d687267e4e464a1ae01baac56ac 90 PIRSF PIRSF029827 1 90 1.5E-43 T 17-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 FORC55_2338 a3795d687267e4e464a1ae01baac56ac 90 SUPERFAMILY SSF111148 1 89 1.83E-41 T 17-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 FORC55_2338 a3795d687267e4e464a1ae01baac56ac 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 17-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 FORC55_2338 a3795d687267e4e464a1ae01baac56ac 90 Gene3D G3DSA:1.10.3880.10 1 90 5.3E-40 T 17-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 FORC55_2338 a3795d687267e4e464a1ae01baac56ac 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.388 T 17-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 FORC55_2338 a3795d687267e4e464a1ae01baac56ac 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.5E-42 T 17-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 FORC55_0895 3cb88e380252dd6287d03e5cbc4904b9 230 Gene3D G3DSA:1.20.120.1760 17 219 1.8E-27 T 17-10-2018 FORC55_0895 3cb88e380252dd6287d03e5cbc4904b9 230 Pfam PF01066 CDP-alcohol phosphatidyltransferase 35 105 2.0E-8 T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 FORC55_1413 dbc34c35be765290c16b2e901171d75a 161 Pfam PF13505 Outer membrane protein beta-barrel domain 6 160 1.8E-15 T 17-10-2018 IPR027385 Outer membrane protein beta-barrel FORC55_1413 dbc34c35be765290c16b2e901171d75a 161 Gene3D G3DSA:2.40.160.20 18 161 9.5E-26 T 17-10-2018 FORC55_1413 dbc34c35be765290c16b2e901171d75a 161 SUPERFAMILY SSF56925 17 160 6.28E-22 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel FORC55_0289 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Gene3D G3DSA:3.40.1370.10 5 200 4.2E-69 T 17-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_0289 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 SUPERFAMILY SSF52166 8 199 7.46E-74 T 17-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 FORC55_0289 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.953 T 17-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0289 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 5.0E-76 T 17-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 FORC55_0289 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 17-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 FORC55_0803 036112be1a3c4f6821c007192abd0e4a 306 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 3.2E-16 T 17-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 FORC55_0803 036112be1a3c4f6821c007192abd0e4a 306 PRINTS PR01270 Histone deacetylase superfamily signature 230 240 3.2E-16 T 17-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 FORC55_0803 036112be1a3c4f6821c007192abd0e4a 306 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 3.2E-16 T 17-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 FORC55_0803 036112be1a3c4f6821c007192abd0e4a 306 Pfam PF00850 Histone deacetylase domain 38 288 8.1E-47 T 17-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 FORC55_0803 036112be1a3c4f6821c007192abd0e4a 306 SUPERFAMILY SSF52768 3 291 8.63E-78 T 17-10-2018 IPR023696 Ureohydrolase domain superfamily FORC55_0803 036112be1a3c4f6821c007192abd0e4a 306 Gene3D G3DSA:3.40.800.20 2 302 2.0E-60 T 17-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 FORC55_1947 16aeaf035747269b4f3128d82b3fa320 178 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 9 173 5.0E-56 T 17-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 FORC55_1947 16aeaf035747269b4f3128d82b3fa320 178 Hamap MF_00398 Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [citX]. 4 178 35.855 T 17-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 FORC55_1947 16aeaf035747269b4f3128d82b3fa320 178 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 9 174 9.1E-64 T 17-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 FORC55_0884 d5d786b4edcd39ae19859857565c7f84 608 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 354 567 6.3E-8 T 17-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 FORC55_0884 d5d786b4edcd39ae19859857565c7f84 608 SUPERFAMILY SSF51197 352 567 1.19E-10 T 17-10-2018 FORC55_0884 d5d786b4edcd39ae19859857565c7f84 608 Gene3D G3DSA:3.60.130.10 313 591 3.1E-25 T 17-10-2018 FORC55_0884 d5d786b4edcd39ae19859857565c7f84 608 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 39 291 2.4E-63 T 17-10-2018 IPR007817 Pyoverdine biosynthesis FORC55_3228 582ac8cb5683bc7b90b6b2783c06f091 173 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 FORC55_3228 582ac8cb5683bc7b90b6b2783c06f091 173 Pfam PF00293 NUDIX domain 22 144 9.3E-15 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_3228 582ac8cb5683bc7b90b6b2783c06f091 173 SUPERFAMILY SSF55811 9 145 7.85E-21 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_3228 582ac8cb5683bc7b90b6b2783c06f091 173 Gene3D G3DSA:3.90.79.10 13 152 7.2E-25 T 17-10-2018 FORC55_2288 3d25b7e9c05a44be6dabf5df51192406 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 1.1E-32 T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_2288 3d25b7e9c05a44be6dabf5df51192406 168 SUPERFAMILY SSF55083 1 148 5.36E-37 T 17-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_2288 3d25b7e9c05a44be6dabf5df51192406 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 6.7E-24 T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_2288 3d25b7e9c05a44be6dabf5df51192406 168 Gene3D G3DSA:3.30.70.560 2 153 1.4E-32 T 17-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 FORC55_3540 eda0819434e1cdb8109c28d89ac439f8 92 SUPERFAMILY SSF54534 7 90 7.85E-25 T 17-10-2018 FORC55_3540 eda0819434e1cdb8109c28d89ac439f8 92 Gene3D G3DSA:3.10.50.40 2 92 1.1E-32 T 17-10-2018 FORC55_3540 eda0819434e1cdb8109c28d89ac439f8 92 Pfam PF13616 PPIC-type PPIASE domain 14 89 1.6E-22 T 17-10-2018 FORC55_0943 9ed0caa403de8bfbf1142a213312098e 286 Gene3D G3DSA:3.90.1200.10 106 285 2.0E-14 T 17-10-2018 FORC55_0943 9ed0caa403de8bfbf1142a213312098e 286 Pfam PF01636 Phosphotransferase enzyme family 32 236 2.6E-10 T 17-10-2018 IPR002575 Aminoglycoside phosphotransferase FORC55_0943 9ed0caa403de8bfbf1142a213312098e 286 SUPERFAMILY SSF56112 31 268 1.14E-33 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily FORC55_1137 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 Gene3D G3DSA:3.10.129.10 1 138 4.2E-40 T 17-10-2018 FORC55_1137 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 Pfam PF03061 Thioesterase superfamily 26 98 6.9E-20 T 17-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 FORC55_1137 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 SUPERFAMILY SSF54637 9 129 2.96E-38 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_2616 cdb7c6a1c209ca443fab4e516139e47e 222 Pfam PF01810 LysE type translocator 16 208 3.5E-38 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_2616 cdb7c6a1c209ca443fab4e516139e47e 222 PIRSF PIRSF006324 1 213 1.1E-60 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_1761 17da202ff9891eb10b5620fc9aac2d63 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.338 T 17-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 FORC55_1761 17da202ff9891eb10b5620fc9aac2d63 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.3E-61 T 17-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 FORC55_1761 17da202ff9891eb10b5620fc9aac2d63 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.1E-90 T 17-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 FORC55_1761 17da202ff9891eb10b5620fc9aac2d63 193 PIRSF PIRSF006102 1 193 2.0E-64 T 17-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 FORC55_3015 2bde5955cb212abdbfd3634da0d70a9e 50 Pfam PF04875 Protein of unknown function, DUF645 28 49 2.8E-6 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_3443 73bc869fb1c6d8c46beae1d8a95285c3 180 Gene3D G3DSA:3.40.630.30 21 179 1.2E-45 T 17-10-2018 FORC55_3443 73bc869fb1c6d8c46beae1d8a95285c3 180 Pfam PF00583 Acetyltransferase (GNAT) family 56 142 1.6E-12 T 17-10-2018 IPR000182 GNAT domain FORC55_3443 73bc869fb1c6d8c46beae1d8a95285c3 180 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 23 176 8.7E-58 T 17-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 FORC55_3443 73bc869fb1c6d8c46beae1d8a95285c3 180 SUPERFAMILY SSF55729 22 142 2.29E-20 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2753 dbc964c84b6bd37750bff25545fe0a37 151 SUPERFAMILY SSF56524 23 149 7.19E-16 T 17-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 FORC55_2753 dbc964c84b6bd37750bff25545fe0a37 151 Pfam PF00174 Oxidoreductase molybdopterin binding domain 47 119 4.9E-5 T 17-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 FORC55_1526 9e4c18981c084fd7b1d830fb1a32c3f9 335 Pfam PF09375 Imelysin 40 311 3.7E-36 T 17-10-2018 IPR018976 Imelysin-like domain FORC55_1526 9e4c18981c084fd7b1d830fb1a32c3f9 335 Gene3D G3DSA:1.20.1420.20 28 335 2.4E-68 T 17-10-2018 IPR038352 Imelysin-like domain superfamily FORC55_0951 766a63d88e95bf8ea1f4908253e9bd62 402 Pfam PF12704 MacB-like periplasmic core domain 29 208 4.4E-12 T 17-10-2018 IPR025857 MacB-like periplasmic core domain FORC55_0951 766a63d88e95bf8ea1f4908253e9bd62 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 4.1E-132 T 17-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 FORC55_0951 766a63d88e95bf8ea1f4908253e9bd62 402 Pfam PF02687 FtsX-like permease family 296 395 2.0E-12 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 FORC55_2889 3a1a04cf95687dc2160a299b45b3075f 526 Pfam PF03553 Na+/H+ antiporter family 165 491 1.8E-94 T 17-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 FORC55_1629 daef9ad6e146c55262a129d6af14ef0f 195 Gene3D G3DSA:3.30.1460.30 3 100 2.8E-16 T 17-10-2018 FORC55_1629 daef9ad6e146c55262a129d6af14ef0f 195 Pfam PF04994 TfoX C-terminal domain 112 190 2.9E-28 T 17-10-2018 IPR007077 TfoX, C-terminal FORC55_1629 daef9ad6e146c55262a129d6af14ef0f 195 PIRSF PIRSF028788 3 195 2.4E-34 T 17-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type FORC55_1629 daef9ad6e146c55262a129d6af14ef0f 195 SUPERFAMILY SSF159894 3 100 2.25E-26 T 17-10-2018 FORC55_1629 daef9ad6e146c55262a129d6af14ef0f 195 Gene3D G3DSA:1.10.150.20 111 195 1.6E-18 T 17-10-2018 FORC55_1629 daef9ad6e146c55262a129d6af14ef0f 195 Pfam PF04993 TfoX N-terminal domain 9 99 8.5E-24 T 17-10-2018 IPR007076 TfoX, N-terminal FORC55_2789 67350697f969cee6d3c51451d7d40ed0 158 Gene3D G3DSA:2.60.40.4150 24 154 8.1E-33 T 17-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily FORC55_2789 67350697f969cee6d3c51451d7d40ed0 158 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 13 147 2.4E-38 T 17-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN FORC55_2789 67350697f969cee6d3c51451d7d40ed0 158 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 146 6.7E-46 T 17-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN FORC55_3447 1705f45b106f369ddc14fd93eb155973 305 Gene3D G3DSA:1.10.10.10 3 89 7.2E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_3447 1705f45b106f369ddc14fd93eb155973 305 Pfam PF03466 LysR substrate binding domain 96 303 2.7E-16 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_3447 1705f45b106f369ddc14fd93eb155973 305 SUPERFAMILY SSF53850 92 300 1.81E-32 T 17-10-2018 FORC55_3447 1705f45b106f369ddc14fd93eb155973 305 Gene3D G3DSA:3.40.190.10 177 275 4.3E-40 T 17-10-2018 FORC55_3447 1705f45b106f369ddc14fd93eb155973 305 Gene3D G3DSA:3.40.190.10 92 299 4.3E-40 T 17-10-2018 FORC55_3447 1705f45b106f369ddc14fd93eb155973 305 SUPERFAMILY SSF46785 6 88 5.78E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_3447 1705f45b106f369ddc14fd93eb155973 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 3.8E-12 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_0027 4db31587dc91421e9972645261cf3eda 213 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 9 210 1.5E-70 T 17-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 FORC55_0027 4db31587dc91421e9972645261cf3eda 213 Pfam PF03006 Haemolysin-III related 6 203 5.1E-38 T 17-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 FORC55_1437 d541d459798e29a7d471e2496d6acd91 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 1.0E-44 T 17-10-2018 IPR006214 Bax inhibitor 1-related FORC55_3194 852b310094cc3c5558947d00381c7f56 412 Gene3D G3DSA:3.30.70.270 232 411 8.9E-43 T 17-10-2018 FORC55_3194 852b310094cc3c5558947d00381c7f56 412 SMART SM00267 227 411 7.1E-32 T 17-10-2018 IPR000160 GGDEF domain FORC55_3194 852b310094cc3c5558947d00381c7f56 412 SUPERFAMILY SSF55073 243 410 6.83E-33 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3194 852b310094cc3c5558947d00381c7f56 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 344 4.8E-25 T 17-10-2018 IPR000160 GGDEF domain FORC55_3194 852b310094cc3c5558947d00381c7f56 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 406 1.6E-5 T 17-10-2018 IPR000160 GGDEF domain FORC55_3194 852b310094cc3c5558947d00381c7f56 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 338 7.2E-22 T 17-10-2018 IPR000160 GGDEF domain FORC55_0405 7c5df5e2d165efcb158118597b0d9fd8 86 SUPERFAMILY SSF109910 3 79 1.14E-26 T 17-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily FORC55_0405 7c5df5e2d165efcb158118597b0d9fd8 86 Gene3D G3DSA:1.10.150.250 1 86 1.3E-39 T 17-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily FORC55_0405 7c5df5e2d165efcb158118597b0d9fd8 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 6.7E-25 T 17-10-2018 IPR005631 Flavinator of succinate dehydrogenase FORC55_1217 003d3550e419b585e73467226399f3aa 405 Pfam PF07690 Major Facilitator Superfamily 16 352 1.9E-41 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_1217 003d3550e419b585e73467226399f3aa 405 Gene3D G3DSA:1.20.1250.20 6 387 3.5E-44 T 17-10-2018 FORC55_1217 003d3550e419b585e73467226399f3aa 405 SUPERFAMILY SSF103473 6 393 1.83E-54 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_0629 289b41da1a149d39a4c57391e7fd2141 814 Gene3D G3DSA:1.10.540.10 123 236 1.5E-99 T 17-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 FORC55_0629 289b41da1a149d39a4c57391e7fd2141 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 234 2.6E-15 T 17-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 FORC55_0629 289b41da1a149d39a4c57391e7fd2141 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.2E-112 T 17-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 FORC55_0629 289b41da1a149d39a4c57391e7fd2141 814 Gene3D G3DSA:2.40.110.10 237 360 1.5E-99 T 17-10-2018 FORC55_0629 289b41da1a149d39a4c57391e7fd2141 814 SUPERFAMILY SSF56645 121 356 8.25E-42 T 17-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 FORC55_0629 289b41da1a149d39a4c57391e7fd2141 814 Gene3D G3DSA:1.20.140.10 361 508 1.5E-99 T 17-10-2018 FORC55_0629 289b41da1a149d39a4c57391e7fd2141 814 SUPERFAMILY SSF47203 361 508 7.41E-24 T 17-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 FORC55_0629 289b41da1a149d39a4c57391e7fd2141 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 5.7E-15 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 FORC55_1337 1092f5174a43491914a5630e83f3dec0 172 Gene3D G3DSA:3.10.129.10 2 172 7.2E-65 T 17-10-2018 FORC55_1337 1092f5174a43491914a5630e83f3dec0 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 1.3E-91 T 17-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_1337 1092f5174a43491914a5630e83f3dec0 172 Pfam PF07977 FabA-like domain 29 158 2.5E-54 T 17-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_1337 1092f5174a43491914a5630e83f3dec0 172 SUPERFAMILY SSF54637 4 169 3.43E-56 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_1337 1092f5174a43491914a5630e83f3dec0 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.433 T 17-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 SUPERFAMILY SSF51161 90 323 1.66E-36 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 Gene3D G3DSA:3.30.60.70 131 171 1.9E-20 T 17-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.8E-13 T 17-10-2018 IPR001451 Hexapeptide repeat FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.988 T 17-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 343 1.8E-178 T 17-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 76 129 7.9E-6 T 17-10-2018 FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.7E-16 T 17-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 Gene3D G3DSA:3.30.70.2010 1 130 1.4E-39 T 17-10-2018 FORC55_0541 8af1f4cbaf8f1621b6305c02037cc7df 343 Gene3D G3DSA:2.160.10.10 172 343 6.5E-70 T 17-10-2018 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 Pfam PF02119 Flagellar P-ring protein 20 360 5.1E-137 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 100 117 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 158 176 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 184 202 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 248 260 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 52 67 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 20 35 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 35 50 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 117 135 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 78 97 4.7E-86 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_0663 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 361 40.166 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 FORC55_3683 fbbb853946c3e9129b8381b07bb13e8d 507 Gene3D G3DSA:3.40.50.12780 4 374 3.5E-67 T 17-10-2018 FORC55_3683 fbbb853946c3e9129b8381b07bb13e8d 507 Pfam PF00501 AMP-binding enzyme 9 381 6.1E-55 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_3683 fbbb853946c3e9129b8381b07bb13e8d 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 17-10-2018 IPR020845 AMP-binding, conserved site FORC55_3683 fbbb853946c3e9129b8381b07bb13e8d 507 SUPERFAMILY SSF56801 3 472 6.15E-78 T 17-10-2018 FORC55_2573 b8b2d8da1ef209c4581b942c6c93ffa9 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 5.7E-35 T 17-10-2018 IPR013551 Domain of unknown function DUF1732 FORC55_2573 b8b2d8da1ef209c4581b942c6c93ffa9 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 2.3E-42 T 17-10-2018 IPR013527 YicC-like, N-terminal FORC55_2573 b8b2d8da1ef209c4581b942c6c93ffa9 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 1.0E-117 T 17-10-2018 IPR005229 Conserved hypothetical protein CHP00255 FORC55_2181 caf7baeb36ad5e39d23917fabd5669df 151 Gene3D G3DSA:3.30.300.70 1 80 3.0E-27 T 17-10-2018 IPR035956 RimP, N-terminal domain superfamily FORC55_2181 caf7baeb36ad5e39d23917fabd5669df 151 SUPERFAMILY SSF75420 2 83 8.37E-26 T 17-10-2018 IPR035956 RimP, N-terminal domain superfamily FORC55_2181 caf7baeb36ad5e39d23917fabd5669df 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.3E-20 T 17-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal FORC55_2181 caf7baeb36ad5e39d23917fabd5669df 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.524 T 17-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 FORC55_2181 caf7baeb36ad5e39d23917fabd5669df 151 SUPERFAMILY SSF74942 84 151 5.1E-17 T 17-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily FORC55_2181 caf7baeb36ad5e39d23917fabd5669df 151 Pfam PF02576 RimP N-terminal domain 12 83 2.2E-29 T 17-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal FORC55_2078 96229fa475f19f395b76c9e719f08ad6 83 SUPERFAMILY SSF47413 11 71 4.5E-12 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2078 96229fa475f19f395b76c9e719f08ad6 83 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 11 75 1.1E-26 T 17-10-2018 IPR031856 Putative bacterial antitoxin YdaS FORC55_2078 96229fa475f19f395b76c9e719f08ad6 83 Gene3D G3DSA:1.10.260.40 9 83 1.7E-25 T 17-10-2018 FORC55_0418 50b087fc696b17565a1f7a3eab65a04d 126 SUPERFAMILY SSF56214 1 124 4.71E-32 T 17-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 FORC55_0418 50b087fc696b17565a1f7a3eab65a04d 126 Gene3D G3DSA:3.90.470.20 1 126 6.3E-44 T 17-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 FORC55_0418 50b087fc696b17565a1f7a3eab65a04d 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 27.098 T 17-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 FORC55_0418 50b087fc696b17565a1f7a3eab65a04d 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 125 4.5E-34 T 17-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 FORC55_0418 50b087fc696b17565a1f7a3eab65a04d 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 89 3.0E-41 T 17-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 FORC55_0418 50b087fc696b17565a1f7a3eab65a04d 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 3.4E-45 T 17-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 FORC55_0418 50b087fc696b17565a1f7a3eab65a04d 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 1.7E-23 T 17-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 FORC55_3329 a0de9ee01bfcfa6adccbc2e763bcdd54 115 Pfam PF09361 Phasin protein 8 108 3.8E-22 T 17-10-2018 IPR018968 Phasin FORC55_3329 a0de9ee01bfcfa6adccbc2e763bcdd54 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 1.5E-59 T 17-10-2018 IPR014176 Phasin, subfamily 3 FORC55_3329 a0de9ee01bfcfa6adccbc2e763bcdd54 115 PIRSF PIRSF028226 1 115 1.5E-59 T 17-10-2018 IPR014176 Phasin, subfamily 3 FORC55_3435 23886cd8cdd920bf8e0b7937b0d4db83 186 SUPERFAMILY SSF50182 98 163 5.23E-7 T 17-10-2018 IPR010920 LSM domain superfamily FORC55_3435 23886cd8cdd920bf8e0b7937b0d4db83 186 Pfam PF00924 Mechanosensitive ion channel 52 163 3.0E-9 T 17-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 FORC55_3388 4792d3263faace29910df37d7ef13345 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 1.9E-16 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_3388 4792d3263faace29910df37d7ef13345 222 SUPERFAMILY SSF161098 9 202 1.02E-31 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3388 4792d3263faace29910df37d7ef13345 222 Gene3D G3DSA:1.10.3720.10 3 217 1.7E-41 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3388 4792d3263faace29910df37d7ef13345 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 215 7.7E-14 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 Pfam PF07687 Peptidase dimerisation domain 212 296 2.3E-7 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 Pfam PF01546 Peptidase family M20/M25/M40 77 472 9.0E-21 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 SUPERFAMILY SSF53187 15 486 2.62E-63 T 17-10-2018 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 14 486 3.0E-184 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 Gene3D G3DSA:3.40.630.10 1 226 3.0E-64 T 17-10-2018 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 Gene3D G3DSA:3.40.630.10 385 490 5.1E-23 T 17-10-2018 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 5.4E-89 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_0583 deee3ba4c65091199cfaa72c66435b06 490 PIRSF PIRSF016599 5 489 2.1E-223 T 17-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 FORC55_2598 d1c4b1e8e08ee10294e4ba79449ea6b5 449 Pfam PF07804 HipA-like C-terminal domain 178 414 2.9E-37 T 17-10-2018 IPR012893 HipA-like, C-terminal FORC55_2598 d1c4b1e8e08ee10294e4ba79449ea6b5 449 Pfam PF13657 HipA N-terminal domain 21 120 2.4E-15 T 17-10-2018 IPR017508 HipA, N-terminal subdomain 1 FORC55_2848 f619f656b0680dd992e3923c87340d7a 550 Pfam PF13584 Oxygen tolerance 21 460 1.1E-77 T 17-10-2018 IPR025738 Aerotolerance-related protein BatD FORC55_1448 643098741e1607ddca3bcd35f831c97f 379 Pfam PF13487 HD domain 233 303 3.9E-18 T 17-10-2018 FORC55_1448 643098741e1607ddca3bcd35f831c97f 379 SMART SM00448 9 121 4.2E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1448 643098741e1607ddca3bcd35f831c97f 379 SMART SM00471 170 321 1.3E-8 T 17-10-2018 IPR003607 HD/PDEase domain FORC55_1448 643098741e1607ddca3bcd35f831c97f 379 SUPERFAMILY SSF52172 8 153 1.31E-37 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_1448 643098741e1607ddca3bcd35f831c97f 379 Gene3D G3DSA:1.10.3210.10 148 365 1.3E-73 T 17-10-2018 FORC55_1448 643098741e1607ddca3bcd35f831c97f 379 Gene3D G3DSA:3.40.50.2300 1 138 2.0E-36 T 17-10-2018 FORC55_1448 643098741e1607ddca3bcd35f831c97f 379 Pfam PF00072 Response regulator receiver domain 11 121 1.4E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_1448 643098741e1607ddca3bcd35f831c97f 379 SUPERFAMILY SSF109604 151 348 1.1E-31 T 17-10-2018 FORC55_0301 76ccbe69aefad1bfb795b52145b3e6f0 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 17-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0301 76ccbe69aefad1bfb795b52145b3e6f0 101 Gene3D G3DSA:4.10.830.10 41 101 4.6E-22 T 17-10-2018 FORC55_0301 76ccbe69aefad1bfb795b52145b3e6f0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.729 T 17-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid FORC55_0301 76ccbe69aefad1bfb795b52145b3e6f0 101 SUPERFAMILY SSF57716 2 101 1.71E-36 T 17-10-2018 FORC55_0301 76ccbe69aefad1bfb795b52145b3e6f0 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.1E-24 T 17-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 FORC55_3492 1ab3f7b322b564affbd3efe312179498 287 SMART SM00849 37 222 1.9E-19 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_3492 1ab3f7b322b564affbd3efe312179498 287 SUPERFAMILY SSF56281 14 262 1.19E-42 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_3492 1ab3f7b322b564affbd3efe312179498 287 Gene3D G3DSA:3.60.15.10 20 256 1.3E-25 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_3492 1ab3f7b322b564affbd3efe312179498 287 Pfam PF00753 Metallo-beta-lactamase superfamily 37 222 2.9E-7 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_3684 967b2cd87b987689bd2f772df69af25e 200 Pfam PF12261 Thermostable hemolysin 16 185 1.7E-59 T 17-10-2018 IPR022050 Thermostable hemolysin FORC55_2579 5fdd5ad29d56817178ae3c998ab6d96c 349 SUPERFAMILY SSF52980 190 302 8.58E-10 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_2579 5fdd5ad29d56817178ae3c998ab6d96c 349 Pfam PF04471 Restriction endonuclease 190 300 5.2E-14 T 17-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 FORC55_2579 5fdd5ad29d56817178ae3c998ab6d96c 349 Gene3D G3DSA:3.40.1350.10 187 307 5.3E-5 T 17-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 FORC55_1051 8ddeef9f77729f5f9fea4d911e2b5562 149 SUPERFAMILY SSF51182 32 145 6.23E-26 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily FORC55_1051 8ddeef9f77729f5f9fea4d911e2b5562 149 Pfam PF07883 Cupin domain 57 116 1.3E-8 T 17-10-2018 IPR013096 Cupin 2, conserved barrel FORC55_1051 8ddeef9f77729f5f9fea4d911e2b5562 149 Gene3D G3DSA:2.60.120.10 12 147 1.3E-42 T 17-10-2018 IPR014710 RmlC-like jelly roll fold FORC55_0132 bd132624af263bf98902d8b2256a9d9f 265 Gene3D G3DSA:3.40.50.1860 11 232 3.8E-83 T 17-10-2018 FORC55_0132 bd132624af263bf98902d8b2256a9d9f 265 Hamap MF_00258 Glutamate racemase [murI]. 7 254 33.951 T 17-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 FORC55_0132 bd132624af263bf98902d8b2256a9d9f 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 17-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 FORC55_0132 bd132624af263bf98902d8b2256a9d9f 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 230 7.3E-71 T 17-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 FORC55_0132 bd132624af263bf98902d8b2256a9d9f 265 SUPERFAMILY SSF53681 8 108 4.05E-30 T 17-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 FORC55_0132 bd132624af263bf98902d8b2256a9d9f 265 Gene3D G3DSA:3.40.50.1860 99 208 3.8E-83 T 17-10-2018 FORC55_0132 bd132624af263bf98902d8b2256a9d9f 265 SUPERFAMILY SSF53681 112 258 1.64E-34 T 17-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 FORC55_0132 bd132624af263bf98902d8b2256a9d9f 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 2.8E-27 T 17-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 FORC55_0006 887a6df0ca5a13bdacf9dca8fd08c69c 145 SUPERFAMILY SSF49764 6 138 2.93E-23 T 17-10-2018 IPR008978 HSP20-like chaperone FORC55_0006 887a6df0ca5a13bdacf9dca8fd08c69c 145 Gene3D G3DSA:2.60.40.790 34 137 1.0E-23 T 17-10-2018 IPR008978 HSP20-like chaperone FORC55_0006 887a6df0ca5a13bdacf9dca8fd08c69c 145 Pfam PF00011 Hsp20/alpha crystallin family 43 137 3.1E-20 T 17-10-2018 IPR002068 Alpha crystallin/Hsp20 domain FORC55_3355 785f60de46673825d846c697930f7f31 181 Gene3D G3DSA:3.90.1520.10 1 180 4.9E-62 T 17-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 FORC55_3355 785f60de46673825d846c697930f7f31 181 SMART SM00989 118 178 8.8E-10 T 17-10-2018 IPR004096 4-vinyl reductase, 4VR FORC55_3355 785f60de46673825d846c697930f7f31 181 Pfam PF07700 Haem-NO-binding 3 160 3.8E-37 T 17-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 FORC55_3355 785f60de46673825d846c697930f7f31 181 SUPERFAMILY SSF111126 1 178 4.71E-51 T 17-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily FORC55_1112 0d086355ca13dd50b859400bf08e7ad3 664 SUPERFAMILY SSF56436 454 661 8.71E-19 T 17-10-2018 IPR016187 C-type lectin fold FORC55_1112 0d086355ca13dd50b859400bf08e7ad3 664 SUPERFAMILY SSF141658 249 322 3.66E-8 T 17-10-2018 FORC55_1112 0d086355ca13dd50b859400bf08e7ad3 664 Gene3D G3DSA:2.80.20.10 236 341 8.7E-12 T 17-10-2018 FORC55_1112 0d086355ca13dd50b859400bf08e7ad3 664 SUPERFAMILY SSF141658 354 442 8.11E-19 T 17-10-2018 FORC55_1112 0d086355ca13dd50b859400bf08e7ad3 664 Gene3D G3DSA:2.80.20.10 360 661 1.6E-105 T 17-10-2018 FORC55_1112 0d086355ca13dd50b859400bf08e7ad3 664 Gene3D G3DSA:3.90.1580.10 477 655 1.6E-105 T 17-10-2018 FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 ProSitePatterns PS01053 Arginase family signature. 256 277 - T 17-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 TIGRFAM TIGR01227 hutG: formimidoylglutamase 11 328 6.0E-132 T 17-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 SUPERFAMILY SSF52768 10 334 1.8E-84 T 17-10-2018 IPR023696 Ureohydrolase domain superfamily FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 Hamap MF_00737 Formimidoylglutamase [hutG]. 6 328 43.993 T 17-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 PIRSF PIRSF036979 26 334 1.8E-26 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 PRINTS PR00116 Arginase signature 253 282 9.4E-5 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 PRINTS PR00116 Arginase signature 123 138 9.4E-5 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 Pfam PF00491 Arginase family 45 326 1.0E-61 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 FORC55_1580 6bdab8478ed5b037662b53eb043284d3 340 Gene3D G3DSA:3.40.800.10 1 340 2.2E-145 T 17-10-2018 FORC55_0710 cc8eadf63bda192cfe431a8e1b716be0 153 SUPERFAMILY SSF160214 57 150 4.32E-23 T 17-10-2018 IPR035924 FlaG-like superfamily FORC55_0710 cc8eadf63bda192cfe431a8e1b716be0 153 Pfam PF03646 FlaG protein 52 150 2.7E-25 T 17-10-2018 IPR005186 FlaG protein FORC55_0710 cc8eadf63bda192cfe431a8e1b716be0 153 Gene3D G3DSA:3.30.160.170 44 143 1.6E-14 T 17-10-2018 IPR035924 FlaG-like superfamily FORC55_1769 a5dc0662d2b678a3db34246145684e86 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 7.0E-81 T 17-10-2018 IPR020206 Uncharacterised protein family, VP2110 FORC55_1769 a5dc0662d2b678a3db34246145684e86 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 2.0E-79 T 17-10-2018 IPR020206 Uncharacterised protein family, VP2110 FORC55_1468 c2584b782d887ee233e8ca0c3f27314e 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 2.1E-48 T 17-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 FORC55_1208 6833d592516d9040dccf52359284f807 372 Pfam PF17186 Lipocalin-like domain 251 372 2.9E-25 T 17-10-2018 FORC55_1208 6833d592516d9040dccf52359284f807 372 Gene3D G3DSA:2.40.370.10 251 372 6.5E-12 T 17-10-2018 IPR023374 AttH-like domain superfamily FORC55_1208 6833d592516d9040dccf52359284f807 372 Pfam PF07143 CrtC N-terminal lipocalin domain 76 246 8.3E-40 T 17-10-2018 IPR010791 AttH domain FORC55_1208 6833d592516d9040dccf52359284f807 372 Gene3D G3DSA:2.40.370.10 63 249 2.5E-44 T 17-10-2018 IPR023374 AttH-like domain superfamily FORC55_1208 6833d592516d9040dccf52359284f807 372 SUPERFAMILY SSF159245 52 372 1.1E-79 T 17-10-2018 FORC55_1492 8d590809c28e9fdb36287a6c5cf61b59 204 Pfam PF00293 NUDIX domain 46 150 9.8E-15 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 FORC55_1492 8d590809c28e9fdb36287a6c5cf61b59 204 Gene3D G3DSA:3.90.79.10 15 197 8.9E-49 T 17-10-2018 FORC55_1492 8d590809c28e9fdb36287a6c5cf61b59 204 SUPERFAMILY SSF55811 18 190 1.27E-34 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 FORC55_0825 068f79d68fd8efc9cd65e490d5ac89ae 267 Gene3D G3DSA:3.30.470.10 1 107 4.5E-26 T 17-10-2018 FORC55_0825 068f79d68fd8efc9cd65e490d5ac89ae 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 6.6E-107 T 17-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 FORC55_0825 068f79d68fd8efc9cd65e490d5ac89ae 267 Gene3D G3DSA:3.20.10.10 112 267 2.3E-52 T 17-10-2018 FORC55_0825 068f79d68fd8efc9cd65e490d5ac89ae 267 SUPERFAMILY SSF56752 1 261 4.45E-70 T 17-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 FORC55_0825 068f79d68fd8efc9cd65e490d5ac89ae 267 Pfam PF01063 Amino-transferase class IV 24 247 1.2E-44 T 17-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 FORC55_0825 068f79d68fd8efc9cd65e490d5ac89ae 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 17-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 FORC55_2202 7239af25dfbff2920f9fbed45dbf7c86 328 Gene3D G3DSA:1.10.3720.10 88 327 7.8E-18 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2202 7239af25dfbff2920f9fbed45dbf7c86 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 2.5E-39 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2202 7239af25dfbff2920f9fbed45dbf7c86 328 SUPERFAMILY SSF161098 93 324 3.27E-13 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1096 1a3d3c64c35df792ca5b40ccdfc7d328 255 TIGRFAM TIGR02642 phage_xxxx: uncharacterized phage protein 1 252 2.8E-36 T 17-10-2018 IPR013464 Conserved hypothetical protein CHP02642 FORC55_1096 1a3d3c64c35df792ca5b40ccdfc7d328 255 Gene3D G3DSA:3.30.260.20 121 255 2.0E-7 T 17-10-2018 FORC55_3449 21b634ae43868afd4e6e7c0eb2c34f4b 192 Pfam PF13489 Methyltransferase domain 35 147 1.2E-11 T 17-10-2018 FORC55_3449 21b634ae43868afd4e6e7c0eb2c34f4b 192 SUPERFAMILY SSF53335 5 192 5.26E-28 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_3449 21b634ae43868afd4e6e7c0eb2c34f4b 192 Gene3D G3DSA:3.40.50.150 1 179 1.7E-24 T 17-10-2018 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 SUPERFAMILY SSF52096 25 280 2.46E-86 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 Pfam PF01039 Carboxyl transferase domain 99 241 1.8E-15 T 17-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.622 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 Gene3D G3DSA:3.90.226.10 25 284 2.8E-84 T 17-10-2018 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_1777 f4b71896bceffc85043597b7dbedcee7 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 6.1E-139 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 FORC55_3195 5a2cc1e62c94df4b9fa1542cc3cbeb85 124 Pfam PF10719 Late competence development protein ComFB 8 83 1.6E-13 T 17-10-2018 IPR019657 Late competence development protein ComFB FORC55_1279 5b6d95cec766040bf01f3c782e8af96f 239 PIRSF PIRSF028069 1 239 2.9E-104 T 17-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 FORC55_1279 5b6d95cec766040bf01f3c782e8af96f 239 Pfam PF11932 Protein of unknown function (DUF3450) 3 232 2.9E-85 T 17-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 FORC55_1221 9fda3d62a38148867d955bc87408eb79 362 Gene3D G3DSA:3.40.50.150 79 350 2.9E-74 T 17-10-2018 FORC55_1221 9fda3d62a38148867d955bc87408eb79 362 PIRSF PIRSF029038 35 362 4.5E-158 T 17-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 FORC55_1221 9fda3d62a38148867d955bc87408eb79 362 Pfam PF05971 Protein of unknown function (DUF890) 44 350 6.8E-156 T 17-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 FORC55_1221 9fda3d62a38148867d955bc87408eb79 362 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 46 352 54.928 T 17-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 FORC55_1221 9fda3d62a38148867d955bc87408eb79 362 SUPERFAMILY SSF53335 85 350 1.48E-28 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_2682 03e926dfc415810cb150fd474ae84dcc 392 Gene3D G3DSA:1.10.150.130 87 203 3.5E-18 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal FORC55_2682 03e926dfc415810cb150fd474ae84dcc 392 Pfam PF13102 Phage integrase SAM-like domain 94 194 3.1E-23 T 17-10-2018 IPR025269 Phage integrase SAM-like domain FORC55_2682 03e926dfc415810cb150fd474ae84dcc 392 Pfam PF00589 Phage integrase family 208 366 8.0E-19 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 FORC55_2682 03e926dfc415810cb150fd474ae84dcc 392 Pfam PF17293 Arm DNA-binding domain 3 81 2.1E-6 T 17-10-2018 IPR035386 Arm, DNA-binding domain FORC55_2682 03e926dfc415810cb150fd474ae84dcc 392 Gene3D G3DSA:1.10.443.10 204 379 1.8E-28 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 FORC55_2682 03e926dfc415810cb150fd474ae84dcc 392 SUPERFAMILY SSF56349 95 376 5.3E-45 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 FORC55_1742 ffccdf1610cf91cea1582f5a46dbe63a 701 Pfam PF05170 AsmA family 1 593 1.1E-172 T 17-10-2018 IPR007844 AsmA FORC55_3556 adddba64b763b6068604ff66c338c941 146 Pfam PF11012 Protein of unknown function (DUF2850) 38 116 3.5E-31 T 17-10-2018 IPR021271 Protein of unknown function DUF2850 FORC55_0449 886cda15da40cb3a8f26c8cd9d36e654 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 2.6E-29 T 17-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial FORC55_0449 886cda15da40cb3a8f26c8cd9d36e654 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 2.6E-29 T 17-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial FORC55_0449 886cda15da40cb3a8f26c8cd9d36e654 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 2.6E-29 T 17-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial FORC55_0449 886cda15da40cb3a8f26c8cd9d36e654 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 2.6E-29 T 17-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial FORC55_0449 886cda15da40cb3a8f26c8cd9d36e654 291 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 3.3E-34 T 17-10-2018 IPR010627 Peptidase A24A, N-terminal FORC55_0449 886cda15da40cb3a8f26c8cd9d36e654 291 Pfam PF01478 Type IV leader peptidase family 135 244 1.9E-26 T 17-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 FORC55_1982 853be68df7609baf1f55a637a56dd9da 204 PIRSF PIRSF006170 1 204 1.3E-52 T 17-10-2018 IPR026039 Uncharacterised protein family UPF0070 FORC55_1982 853be68df7609baf1f55a637a56dd9da 204 SUPERFAMILY SSF48452 90 188 1.22E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1982 853be68df7609baf1f55a637a56dd9da 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.8E-56 T 17-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 FORC55_1982 853be68df7609baf1f55a637a56dd9da 204 Gene3D G3DSA:1.25.40.10 28 203 1.3E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_2944 a33ab6e18ad1d9056b0e2f2d7ddd55af 779 Gene3D G3DSA:3.40.50.300 240 420 1.9E-5 T 17-10-2018 FORC55_2944 a33ab6e18ad1d9056b0e2f2d7ddd55af 779 SUPERFAMILY SSF52540 242 543 4.62E-8 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0337 a2f3db0355b915158daa4a649ef30199 115 Gene3D G3DSA:3.10.490.10 4 115 4.6E-41 T 17-10-2018 FORC55_0337 a2f3db0355b915158daa4a649ef30199 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 2.8E-27 T 17-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like FORC55_0337 a2f3db0355b915158daa4a649ef30199 115 SUPERFAMILY SSF110857 3 114 4.58E-33 T 17-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily FORC55_2785 174cd3da89ba937427834af9e85cceab 145 Pfam PF04965 Gene 25-like lysozyme 38 124 1.3E-16 T 17-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD FORC55_2785 174cd3da89ba937427834af9e85cceab 145 Gene3D G3DSA:3.10.450.40 15 135 6.4E-9 T 17-10-2018 FORC55_2785 174cd3da89ba937427834af9e85cceab 145 SUPERFAMILY SSF160719 34 138 2.09E-20 T 17-10-2018 FORC55_2785 174cd3da89ba937427834af9e85cceab 145 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 14 144 4.1E-40 T 17-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein FORC55_2551 1abc7268689b8ff28bff8851cf8491b8 527 SUPERFAMILY SSF56112 332 509 2.61E-8 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily FORC55_2551 1abc7268689b8ff28bff8851cf8491b8 527 SUPERFAMILY SSF53448 21 227 4.57E-6 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2921 55c082cc94cbc514ac763afb7f9b2f0d 295 PIRSF PIRSF015558 1 287 9.2E-90 T 17-10-2018 IPR016634 WYL domain protein, s026 type FORC55_2921 55c082cc94cbc514ac763afb7f9b2f0d 295 Pfam PF13280 WYL domain 120 207 2.6E-11 T 17-10-2018 IPR026881 WYL domain FORC55_0021 c17e6ef123a6c68a37293886d988805a 294 Pfam PF01553 Acyltransferase 73 226 4.8E-15 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_0021 c17e6ef123a6c68a37293886d988805a 294 SUPERFAMILY SSF69593 18 249 6.8E-27 T 17-10-2018 FORC55_0021 c17e6ef123a6c68a37293886d988805a 294 SMART SM00563 85 227 2.6E-23 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 FORC55_0833 52744bb3e6d04c5612bd297b227ae2f9 385 Gene3D G3DSA:3.40.1090.10 13 139 5.7E-8 T 17-10-2018 FORC55_0833 52744bb3e6d04c5612bd297b227ae2f9 385 Pfam PF01734 Patatin-like phospholipase 29 198 8.3E-21 T 17-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 FORC55_0833 52744bb3e6d04c5612bd297b227ae2f9 385 SUPERFAMILY SSF52151 25 267 9.42E-35 T 17-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase FORC55_2100 4ea5ce391f332c9b2d3f0b86dac4ec9a 233 Pfam PF00665 Integrase core domain 73 183 1.8E-25 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 FORC55_2100 4ea5ce391f332c9b2d3f0b86dac4ec9a 233 Gene3D G3DSA:3.30.420.10 59 227 3.6E-18 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 FORC55_2100 4ea5ce391f332c9b2d3f0b86dac4ec9a 233 SUPERFAMILY SSF53098 70 227 1.82E-49 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_2100 4ea5ce391f332c9b2d3f0b86dac4ec9a 233 Pfam PF13276 HTH-like domain 2 49 2.5E-12 T 17-10-2018 IPR025948 HTH-like domain FORC55_0364 d0918ca251a9a70ba9b5411f10af65cf 84 Gene3D G3DSA:3.30.300.90 1 84 1.7E-31 T 17-10-2018 FORC55_0364 d0918ca251a9a70ba9b5411f10af65cf 84 Pfam PF01722 BolA-like protein 20 74 5.0E-12 T 17-10-2018 IPR002634 BolA protein FORC55_0364 d0918ca251a9a70ba9b5411f10af65cf 84 PIRSF PIRSF003113 1 83 8.7E-21 T 17-10-2018 IPR002634 BolA protein FORC55_0364 d0918ca251a9a70ba9b5411f10af65cf 84 SUPERFAMILY SSF82657 4 82 7.98E-28 T 17-10-2018 IPR036065 BolA-like superfamily FORC55_2500 6d3e0e708f2af62a1d2680cde9dce1e1 445 PIRSF PIRSF006060 1 433 4.8E-49 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 FORC55_2500 6d3e0e708f2af62a1d2680cde9dce1e1 445 Gene3D G3DSA:1.20.1740.10 1 438 3.0E-59 T 17-10-2018 FORC55_2500 6d3e0e708f2af62a1d2680cde9dce1e1 445 Pfam PF13520 Amino acid permease 8 421 1.3E-35 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 FORC55_0005 57d22009812f613d6db3fd2e101ef887 140 SUPERFAMILY SSF54534 50 122 1.57E-5 T 17-10-2018 FORC55_0005 57d22009812f613d6db3fd2e101ef887 140 Gene3D G3DSA:3.10.50.30 44 129 3.5E-8 T 17-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 FORC55_1347 da116311480faa6a22b9ac4df83d0015 133 Gene3D G3DSA:1.10.260.40 1 80 1.0E-17 T 17-10-2018 FORC55_1347 da116311480faa6a22b9ac4df83d0015 133 SMART SM00530 5 60 3.7E-11 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_1347 da116311480faa6a22b9ac4df83d0015 133 SUPERFAMILY SSF47413 1 62 1.08E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_1347 da116311480faa6a22b9ac4df83d0015 133 Pfam PF01381 Helix-turn-helix 6 60 4.0E-13 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_1342 da116311480faa6a22b9ac4df83d0015 133 Gene3D G3DSA:1.10.260.40 1 80 1.0E-17 T 17-10-2018 FORC55_1342 da116311480faa6a22b9ac4df83d0015 133 SMART SM00530 5 60 3.7E-11 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_1342 da116311480faa6a22b9ac4df83d0015 133 SUPERFAMILY SSF47413 1 62 1.08E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_1342 da116311480faa6a22b9ac4df83d0015 133 Pfam PF01381 Helix-turn-helix 6 60 4.0E-13 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_1810 9c00c6128be476ea23f89672bbe94646 169 Gene3D G3DSA:2.70.70.10 9 169 3.9E-61 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_1810 9c00c6128be476ea23f89672bbe94646 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 7.7E-50 T 17-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 FORC55_1810 9c00c6128be476ea23f89672bbe94646 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.2E-48 T 17-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 FORC55_1810 9c00c6128be476ea23f89672bbe94646 169 SUPERFAMILY SSF51261 17 166 5.41E-55 T 17-10-2018 IPR011055 Duplicated hybrid motif FORC55_1810 9c00c6128be476ea23f89672bbe94646 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 17-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 FORC55_3639 f9c1a741b59f02501ec138cff9590220 201 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 26.466 T 17-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 FORC55_3639 f9c1a741b59f02501ec138cff9590220 201 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 199 1.4E-85 T 17-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 FORC55_3639 f9c1a741b59f02501ec138cff9590220 201 Gene3D G3DSA:3.40.1280.10 1 201 7.1E-68 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_3639 f9c1a741b59f02501ec138cff9590220 201 SUPERFAMILY SSF75217 1 201 1.57E-66 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_3569 0c853227ab33025ebaa629ca1124a407 275 Pfam PF03618 Kinase/pyrophosphorylase 8 265 7.3E-73 T 17-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 FORC55_3569 0c853227ab33025ebaa629ca1124a407 275 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 5 274 66.173 T 17-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein FORC55_0539 c0f2ccf52c4014a516c26f04230e9421 363 Pfam PF11814 Peptidase_C39 like family 157 359 4.1E-77 T 17-10-2018 IPR021770 Protein of unknown function DUF3335 FORC55_0539 c0f2ccf52c4014a516c26f04230e9421 363 Gene3D G3DSA:3.40.630.30 1 151 2.8E-31 T 17-10-2018 FORC55_0539 c0f2ccf52c4014a516c26f04230e9421 363 Pfam PF00583 Acetyltransferase (GNAT) family 34 123 5.4E-18 T 17-10-2018 IPR000182 GNAT domain FORC55_0539 c0f2ccf52c4014a516c26f04230e9421 363 SUPERFAMILY SSF55729 1 147 7.26E-31 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2633 7c14b1369818e37106377357cd2d3db5 83 Pfam PF04380 Membrane fusogenic activity 1 78 4.8E-27 T 17-10-2018 IPR007475 Membrane fusogenic activity FORC55_0971 2befca802e10a396a17d8a43d9b419fd 513 Pfam PF11840 Protein of unknown function (DUF3360) 9 513 1.9E-270 T 17-10-2018 IPR021794 Protein of unknown function DUF3360 FORC55_1166 ffab8e8b27c2e3732228ac616a55352b 321 Pfam PF00582 Universal stress protein family 170 305 1.4E-14 T 17-10-2018 IPR006016 UspA FORC55_1166 ffab8e8b27c2e3732228ac616a55352b 321 Pfam PF00582 Universal stress protein family 5 136 6.6E-13 T 17-10-2018 IPR006016 UspA FORC55_1166 ffab8e8b27c2e3732228ac616a55352b 321 SUPERFAMILY SSF52402 144 312 7.62E-23 T 17-10-2018 FORC55_1166 ffab8e8b27c2e3732228ac616a55352b 321 Gene3D G3DSA:3.40.50.12370 1 320 4.4E-91 T 17-10-2018 FORC55_1166 ffab8e8b27c2e3732228ac616a55352b 321 PRINTS PR01438 Universal stress protein signature 267 279 1.3E-6 T 17-10-2018 IPR006015 Universal stress protein A FORC55_1166 ffab8e8b27c2e3732228ac616a55352b 321 PRINTS PR01438 Universal stress protein signature 144 162 1.3E-6 T 17-10-2018 IPR006015 Universal stress protein A FORC55_1166 ffab8e8b27c2e3732228ac616a55352b 321 PRINTS PR01438 Universal stress protein signature 285 307 1.3E-6 T 17-10-2018 IPR006015 Universal stress protein A FORC55_1166 ffab8e8b27c2e3732228ac616a55352b 321 SUPERFAMILY SSF52402 1 138 7.45E-18 T 17-10-2018 FORC55_1049 7c1548302b375bb55c77c92d2f4a558d 389 Gene3D G3DSA:1.20.1090.10 190 388 1.8E-41 T 17-10-2018 FORC55_1049 7c1548302b375bb55c77c92d2f4a558d 389 SUPERFAMILY SSF56796 5 388 7.07E-96 T 17-10-2018 FORC55_1049 7c1548302b375bb55c77c92d2f4a558d 389 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 372 9.3E-87 T 17-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 FORC55_1049 7c1548302b375bb55c77c92d2f4a558d 389 Gene3D G3DSA:3.40.50.1970 1 189 2.4E-48 T 17-10-2018 FORC55_1249 4b04641a70ec69163585cc8d7b421099 839 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 22 807 3.6E-251 T 17-10-2018 IPR018752 Uncharacterised protein family UPF0753 FORC55_1249 4b04641a70ec69163585cc8d7b421099 839 Hamap MF_01871 UPF0753 protein . 17 822 23.311 T 17-10-2018 IPR018752 Uncharacterised protein family UPF0753 FORC55_2835 592d52268113841ee84bb6652f166836 498 Pfam PF00361 Proton-conducting membrane transporter 129 415 2.1E-59 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2835 592d52268113841ee84bb6652f166836 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 2.3E-15 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2835 592d52268113841ee84bb6652f166836 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 2.3E-15 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2835 592d52268113841ee84bb6652f166836 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 2.3E-15 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2835 592d52268113841ee84bb6652f166836 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 2.3E-15 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2835 592d52268113841ee84bb6652f166836 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 2.3E-15 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 FORC55_2021 eac7956e0dec48961869aa1607f0ba72 229 Gene3D G3DSA:1.10.10.10 127 228 7.6E-41 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2021 eac7956e0dec48961869aa1607f0ba72 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.0E-28 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_2021 eac7956e0dec48961869aa1607f0ba72 229 SMART SM00448 3 116 3.0E-45 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2021 eac7956e0dec48961869aa1607f0ba72 229 SMART SM00862 150 225 2.0E-28 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 FORC55_2021 eac7956e0dec48961869aa1607f0ba72 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.2E-113 T 17-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 FORC55_2021 eac7956e0dec48961869aa1607f0ba72 229 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-39 T 17-10-2018 FORC55_2021 eac7956e0dec48961869aa1607f0ba72 229 SUPERFAMILY SSF52172 3 184 1.42E-43 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2021 eac7956e0dec48961869aa1607f0ba72 229 Pfam PF00072 Response regulator receiver domain 5 116 4.9E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0736 71201d50bd9bea8e87614c0ed01f86c2 176 Pfam PF04315 Elongation factor P hydroxylase 11 169 1.4E-74 T 17-10-2018 IPR007411 Elongation factor P hydroxylase FORC55_0944 c61ca96e9f95f529f0fde1aeaa2c05b5 179 SUPERFAMILY SSF53474 2 171 1.46E-6 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0944 c61ca96e9f95f529f0fde1aeaa2c05b5 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 9.1E-73 T 17-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA FORC55_0944 c61ca96e9f95f529f0fde1aeaa2c05b5 179 Gene3D G3DSA:3.40.50.1820 1 178 4.8E-19 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0944 c61ca96e9f95f529f0fde1aeaa2c05b5 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.232 T 17-10-2018 IPR022987 Uncharacterised protein family UPF0227 FORC55_0345 034d3f76baa8108f3482740a7323f003 189 Gene3D G3DSA:1.10.60.30 104 177 6.2E-25 T 17-10-2018 FORC55_0345 034d3f76baa8108f3482740a7323f003 189 PIRSF PIRSF016183 1 176 1.9E-71 T 17-10-2018 IPR006839 Ribosome-associated, YjgA FORC55_0345 034d3f76baa8108f3482740a7323f003 189 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 172 23.392 T 17-10-2018 IPR006839 Ribosome-associated, YjgA FORC55_0345 034d3f76baa8108f3482740a7323f003 189 SUPERFAMILY SSF158710 28 171 1.7E-51 T 17-10-2018 IPR023153 PSPTO4464-like domain superfamily FORC55_0345 034d3f76baa8108f3482740a7323f003 189 Gene3D G3DSA:1.10.60.30 28 102 4.2E-27 T 17-10-2018 FORC55_0345 034d3f76baa8108f3482740a7323f003 189 Pfam PF04751 Protein of unknown function (DUF615) 18 168 2.5E-55 T 17-10-2018 IPR006839 Ribosome-associated, YjgA FORC55_2361 74d61d390d93d9f50a9ee241374810c4 127 Pfam PF09834 Predicted membrane protein (DUF2061) 66 116 9.1E-22 T 17-10-2018 IPR018638 Domain of unknown function DUF2061, membrane FORC55_2361 74d61d390d93d9f50a9ee241374810c4 127 Pfam PF09834 Predicted membrane protein (DUF2061) 1 51 1.9E-21 T 17-10-2018 IPR018638 Domain of unknown function DUF2061, membrane FORC55_3417 d573684e4e6f9bb0a7f86c298dc1bd0e 195 PIRSF PIRSF020606 2 195 6.8E-83 T 17-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 FORC55_3417 d573684e4e6f9bb0a7f86c298dc1bd0e 195 Pfam PF09997 Predicted membrane protein (DUF2238) 40 176 1.4E-51 T 17-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 FORC55_1476 47d951714e98be7e0a840d69db473a5f 257 Pfam PF06629 MltA-interacting protein MipA 50 257 7.1E-42 T 17-10-2018 IPR010583 MltA-interacting MipA FORC55_3585 071b8e08fb9999aa3c006ec26e3f3ce5 105 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 2.0E-26 T 17-10-2018 IPR008407 Branched-chain amino acid transport, AzlD FORC55_0123 e50e347e9529b680039bd607a0cac554 330 Gene3D G3DSA:3.30.70.3040 97 187 2.8E-5 T 17-10-2018 FORC55_0123 e50e347e9529b680039bd607a0cac554 330 PIRSF PIRSF003097 31 326 2.3E-63 T 17-10-2018 IPR004513 Cell division protein FtsX GO:0016021 FORC55_0469 a3f7854b2ea3cce41608e90691b5b1c2 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.293 T 17-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0469 a3f7854b2ea3cce41608e90691b5b1c2 360 Pfam PF00953 Glycosyl transferase family 4 99 283 5.9E-37 T 17-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 FORC55_0469 a3f7854b2ea3cce41608e90691b5b1c2 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 17-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0469 a3f7854b2ea3cce41608e90691b5b1c2 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 6.7E-156 T 17-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0469 a3f7854b2ea3cce41608e90691b5b1c2 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 17-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0469 a3f7854b2ea3cce41608e90691b5b1c2 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 17-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 FORC55_0252 eac2581e0b62a7c51f9f2d754652534a 196 PIRSF PIRSF016482 1 196 2.9E-86 T 17-10-2018 IPR007445 Pilus assembly protein, PilO FORC55_0252 eac2581e0b62a7c51f9f2d754652534a 196 Gene3D G3DSA:3.30.70.60 92 196 3.4E-27 T 17-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 FORC55_0252 eac2581e0b62a7c51f9f2d754652534a 196 Pfam PF04350 Pilus assembly protein, PilO 50 189 1.2E-45 T 17-10-2018 IPR007445 Pilus assembly protein, PilO FORC55_3256 152fbfc8f82e913a6981e880475212fd 216 Gene3D G3DSA:3.40.50.880 1 216 8.4E-88 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_3256 152fbfc8f82e913a6981e880475212fd 216 SUPERFAMILY SSF52317 1 215 2.2E-57 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_3256 152fbfc8f82e913a6981e880475212fd 216 PIRSF PIRSF006320 1 216 1.3E-106 T 17-10-2018 IPR026041 Glyoxalase ElbB FORC55_1940 5e77524d10e3badd2474cb9fbb323d05 300 SUPERFAMILY SSF56024 138 281 6.87E-9 T 17-10-2018 FORC55_1940 5e77524d10e3badd2474cb9fbb323d05 300 Pfam PF13091 PLD-like domain 170 279 3.3E-11 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 FORC55_1940 5e77524d10e3badd2474cb9fbb323d05 300 Gene3D G3DSA:3.30.870.10 136 297 1.2E-28 T 17-10-2018 FORC55_1213 7992d755b6b56930f6c317eb7aa067d8 212 SUPERFAMILY SSF103647 29 80 1.01E-9 T 17-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 FORC55_1213 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 123 138 8.1E-9 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_1213 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 93 115 8.1E-9 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_1213 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 138 154 8.1E-9 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 FORC55_1213 7992d755b6b56930f6c317eb7aa067d8 212 Pfam PF00691 OmpA family 92 187 3.4E-16 T 17-10-2018 IPR006665 OmpA-like domain FORC55_1213 7992d755b6b56930f6c317eb7aa067d8 212 Gene3D G3DSA:3.30.1330.60 70 192 6.9E-28 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_1213 7992d755b6b56930f6c317eb7aa067d8 212 SUPERFAMILY SSF103088 63 192 3.92E-29 T 17-10-2018 IPR036737 OmpA-like domain superfamily FORC55_3346 a371546858609b297b507aa6900025ad 486 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 474 6.6E-9 T 17-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 SUPERFAMILY SSF52935 350 477 1.47E-21 T 17-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 SUPERFAMILY SSF51621 3 347 4.32E-88 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 FORC55_3346 a371546858609b297b507aa6900025ad 486 SUPERFAMILY SSF50800 71 168 2.79E-23 T 17-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily FORC55_3346 a371546858609b297b507aa6900025ad 486 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 2.4E-126 T 17-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 Gene3D G3DSA:2.40.33.10 70 170 1.4E-141 T 17-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 Gene3D G3DSA:3.20.20.60 3 339 1.4E-141 T 17-10-2018 FORC55_3346 a371546858609b297b507aa6900025ad 486 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 1.1E-148 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 Gene3D G3DSA:3.40.1380.20 340 473 1.4E-141 T 17-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 PRINTS PR01050 Pyruvate kinase family signature 188 202 7.8E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 PRINTS PR01050 Pyruvate kinase family signature 298 316 7.8E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 PRINTS PR01050 Pyruvate kinase family signature 59 75 7.8E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 PRINTS PR01050 Pyruvate kinase family signature 221 247 7.8E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 PRINTS PR01050 Pyruvate kinase family signature 317 333 7.8E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 PRINTS PR01050 Pyruvate kinase family signature 273 297 7.8E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3346 a371546858609b297b507aa6900025ad 486 PRINTS PR01050 Pyruvate kinase family signature 248 272 7.8E-54 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 FORC55_3119 fa525a4e05a0e32b0898502eacff7e10 320 Pfam PF14022 Protein of unknown function (DUF4238) 2 223 3.2E-23 T 17-10-2018 IPR025332 Protein of unknown function DUF4238 FORC55_0565 fc1fe41ec666e192e0b8bda94bb6d2d4 376 Gene3D G3DSA:3.40.50.150 186 376 1.4E-44 T 17-10-2018 FORC55_0565 fc1fe41ec666e192e0b8bda94bb6d2d4 376 SUPERFAMILY SSF53335 197 353 3.64E-26 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0565 fc1fe41ec666e192e0b8bda94bb6d2d4 376 Gene3D G3DSA:3.40.50.150 8 181 1.4E-52 T 17-10-2018 FORC55_0565 fc1fe41ec666e192e0b8bda94bb6d2d4 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 FORC55_0565 fc1fe41ec666e192e0b8bda94bb6d2d4 376 PIRSF PIRSF037565 1 376 1.3E-172 T 17-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 FORC55_0565 fc1fe41ec666e192e0b8bda94bb6d2d4 376 Pfam PF05175 Methyltransferase small domain 200 372 1.1E-52 T 17-10-2018 IPR007848 Methyltransferase small domain GO:0008168 FORC55_0565 fc1fe41ec666e192e0b8bda94bb6d2d4 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 375 49.296 T 17-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 FORC55_1485 ffc1610dcdbe6453896a310c61704b36 191 SUPERFAMILY SSF55729 13 185 1.34E-40 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_1485 ffc1610dcdbe6453896a310c61704b36 191 Pfam PF13302 Acetyltransferase (GNAT) domain 18 160 6.1E-19 T 17-10-2018 IPR000182 GNAT domain FORC55_1485 ffc1610dcdbe6453896a310c61704b36 191 Gene3D G3DSA:3.40.630.30 14 190 8.5E-44 T 17-10-2018 FORC55_1662 2686ead5ae8a0447c701647824f6e374 413 SUPERFAMILY SSF53335 40 366 8.52E-88 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1662 2686ead5ae8a0447c701647824f6e374 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 138 406 5.0E-84 T 17-10-2018 FORC55_1662 2686ead5ae8a0447c701647824f6e374 413 PIRSF PIRSF003085 18 413 1.3E-123 T 17-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 FORC55_1662 2686ead5ae8a0447c701647824f6e374 413 Gene3D G3DSA:3.40.50.150 144 413 2.6E-104 T 17-10-2018 FORC55_2536 1670ab41bcc6d2f2909d05caa602ec52 233 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 224 2.3E-107 T 17-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 FORC55_2536 1670ab41bcc6d2f2909d05caa602ec52 233 Gene3D G3DSA:3.90.550.10 2 225 1.9E-69 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2536 1670ab41bcc6d2f2909d05caa602ec52 233 SUPERFAMILY SSF53448 3 226 1.24E-63 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_2536 1670ab41bcc6d2f2909d05caa602ec52 233 Pfam PF02348 Cytidylyltransferase 3 182 3.5E-32 T 17-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 383 38.528 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PIRSF PIRSF000724 1 387 8.0E-135 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 Pfam PF00162 Phosphoglycerate kinase 8 373 1.5E-138 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 SUPERFAMILY SSF53748 4 382 3.18E-143 T 17-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 17-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 Gene3D G3DSA:3.40.50.1260 165 373 3.5E-152 T 17-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 Gene3D G3DSA:3.40.50.1260 10 379 3.5E-152 T 17-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_2310 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.8E-82 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 FORC55_0280 a741511b198dd94d430b4f00fe08930c 201 SUPERFAMILY SSF54534 2 140 3.14E-35 T 17-10-2018 FORC55_0280 a741511b198dd94d430b4f00fe08930c 201 Gene3D G3DSA:2.40.10.330 71 121 3.3E-60 T 17-10-2018 FORC55_0280 a741511b198dd94d430b4f00fe08930c 201 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 4.3E-11 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain FORC55_0280 a741511b198dd94d430b4f00fe08930c 201 Gene3D G3DSA:3.10.50.40 3 154 3.3E-60 T 17-10-2018 FORC55_3399 79f7ae34a951737d0e27d9a7fe0b58b0 422 Gene3D G3DSA:3.40.50.300 226 421 2.6E-47 T 17-10-2018 FORC55_3399 79f7ae34a951737d0e27d9a7fe0b58b0 422 Pfam PF00270 DEAD/DEAH box helicase 30 202 2.1E-52 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 FORC55_3399 79f7ae34a951737d0e27d9a7fe0b58b0 422 SUPERFAMILY SSF52540 81 367 6.37E-75 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3399 79f7ae34a951737d0e27d9a7fe0b58b0 422 Pfam PF00271 Helicase conserved C-terminal domain 240 346 3.3E-27 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_3399 79f7ae34a951737d0e27d9a7fe0b58b0 422 Gene3D G3DSA:3.40.50.300 2 225 2.7E-79 T 17-10-2018 FORC55_3399 79f7ae34a951737d0e27d9a7fe0b58b0 422 SMART SM00490 265 346 1.1E-31 T 17-10-2018 IPR001650 Helicase, C-terminal FORC55_3399 79f7ae34a951737d0e27d9a7fe0b58b0 422 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site FORC55_3399 79f7ae34a951737d0e27d9a7fe0b58b0 422 SMART SM00487 25 229 1.1E-63 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_0365 aef0fdd0c22feccec83c99f6cf277987 419 Gene3D G3DSA:3.65.10.10 13 414 2.5E-174 T 17-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 FORC55_0365 aef0fdd0c22feccec83c99f6cf277987 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.991 T 17-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_0365 aef0fdd0c22feccec83c99f6cf277987 419 SUPERFAMILY SSF55205 6 418 4.41E-143 T 17-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 FORC55_0365 aef0fdd0c22feccec83c99f6cf277987 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 8.2E-123 T 17-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 FORC55_0365 aef0fdd0c22feccec83c99f6cf277987 419 Gene3D G3DSA:3.65.10.10 22 230 2.5E-174 T 17-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 FORC55_0365 aef0fdd0c22feccec83c99f6cf277987 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 6.1E-185 T 17-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 FORC55_0568 23172cedd88fc53dcc3adf6afb7685b7 415 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 4.6E-108 T 17-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 FORC55_0568 23172cedd88fc53dcc3adf6afb7685b7 415 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.526 T 17-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 FORC55_0568 23172cedd88fc53dcc3adf6afb7685b7 415 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 9.7E-201 T 17-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 FORC55_0568 23172cedd88fc53dcc3adf6afb7685b7 415 PIRSF PIRSF016055 1 414 3.5E-201 T 17-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 FORC55_3320 4f3b29273c6967eeee8e5d6df18c2a5e 191 Gene3D G3DSA:1.10.3820.10 12 187 1.6E-33 T 17-10-2018 IPR038266 NapC/NirT cytochrome c superfamily FORC55_3320 4f3b29273c6967eeee8e5d6df18c2a5e 191 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 4 185 3.3E-94 T 17-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 FORC55_3320 4f3b29273c6967eeee8e5d6df18c2a5e 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 184 1.5E-71 T 17-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal FORC55_3320 4f3b29273c6967eeee8e5d6df18c2a5e 191 SUPERFAMILY SSF48695 16 190 4.81E-57 T 17-10-2018 IPR036280 Multiheme cytochrome superfamily FORC55_3320 4f3b29273c6967eeee8e5d6df18c2a5e 191 PIRSF PIRSF000013 1 191 1.8E-95 T 17-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 FORC55_0093 52431806c07d7fc5eb8d2c0b92ee7eb8 182 Pfam PF04220 Der GTPase activator (YihI) 21 172 1.0E-44 T 17-10-2018 IPR007336 Der GTPase activator GO:0005096 FORC55_0093 52431806c07d7fc5eb8d2c0b92ee7eb8 182 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 175 16.381 T 17-10-2018 IPR007336 Der GTPase activator GO:0005096 FORC55_1727 5393416f53eac0d3c3aa1da67a864205 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 8.4E-36 T 17-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family FORC55_1727 5393416f53eac0d3c3aa1da67a864205 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.506 T 17-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family FORC55_1727 5393416f53eac0d3c3aa1da67a864205 109 SUPERFAMILY SSF82607 11 103 1.12E-36 T 17-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily FORC55_1727 5393416f53eac0d3c3aa1da67a864205 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 2.7E-39 T 17-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family FORC55_1727 5393416f53eac0d3c3aa1da67a864205 109 Gene3D G3DSA:3.30.1310.10 1 109 3.4E-48 T 17-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily FORC55_1727 5393416f53eac0d3c3aa1da67a864205 109 PIRSF PIRSF004555 3 109 4.6E-40 T 17-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family FORC55_1461 10f4dcaebec5fb89b4a728a97dc67808 234 SUPERFAMILY SSF48008 87 223 7.32E-25 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal FORC55_1461 10f4dcaebec5fb89b4a728a97dc67808 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 1.6E-15 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_1461 10f4dcaebec5fb89b4a728a97dc67808 234 Gene3D G3DSA:1.10.10.10 2 81 2.9E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1461 10f4dcaebec5fb89b4a728a97dc67808 234 SUPERFAMILY SSF46785 15 107 1.77E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_1461 10f4dcaebec5fb89b4a728a97dc67808 234 SMART SM00345 22 80 2.6E-14 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 FORC55_1461 10f4dcaebec5fb89b4a728a97dc67808 234 Gene3D G3DSA:1.20.120.530 83 225 5.9E-29 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal FORC55_1461 10f4dcaebec5fb89b4a728a97dc67808 234 Pfam PF07729 FCD domain 90 216 1.6E-26 T 17-10-2018 IPR011711 GntR, C-terminal FORC55_1461 10f4dcaebec5fb89b4a728a97dc67808 234 SMART SM00895 90 217 2.7E-23 T 17-10-2018 IPR011711 GntR, C-terminal FORC55_1785 53cc48c97b5f0bd36f6541ff8120da25 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 347 6.1E-35 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 FORC55_1785 53cc48c97b5f0bd36f6541ff8120da25 528 Gene3D G3DSA:3.40.50.720 379 528 4.2E-33 T 17-10-2018 FORC55_1785 53cc48c97b5f0bd36f6541ff8120da25 528 SUPERFAMILY SSF51735 387 518 3.19E-16 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1785 53cc48c97b5f0bd36f6541ff8120da25 528 Gene3D G3DSA:1.20.1530.20 2 363 6.5E-45 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily FORC55_1785 53cc48c97b5f0bd36f6541ff8120da25 528 Pfam PF02254 TrkA-N domain 388 504 6.6E-21 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 FORC55_0400 b00d4da0b4caa283fab3d20f88216095 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 2.2E-35 T 17-10-2018 IPR011978 Uncharacterised protein family UPF0149 FORC55_0400 b00d4da0b4caa283fab3d20f88216095 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 21 176 3.6E-12 T 17-10-2018 IPR011978 Uncharacterised protein family UPF0149 FORC55_0400 b00d4da0b4caa283fab3d20f88216095 191 Gene3D G3DSA:1.20.120.740 4 191 9.6E-47 T 17-10-2018 FORC55_0400 b00d4da0b4caa283fab3d20f88216095 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 35.757 T 17-10-2018 IPR011978 Uncharacterised protein family UPF0149 FORC55_0400 b00d4da0b4caa283fab3d20f88216095 191 SUPERFAMILY SSF101327 7 178 1.7E-42 T 17-10-2018 IPR036255 YgfB-like superfamily FORC55_0587 6ead3e8ff0c5588df67c18a070aee812 129 Pfam PF07417 Transcriptional regulator Crl 6 122 9.3E-49 T 17-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 FORC55_0587 6ead3e8ff0c5588df67c18a070aee812 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 30.048 T 17-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 FORC55_0587 6ead3e8ff0c5588df67c18a070aee812 129 Gene3D G3DSA:3.30.310.230 2 128 3.2E-44 T 17-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 FORC55_0432 cf2c87977a49cf8bc0f53e2fcf94a480 202 SMART SM00287 19 85 4.2E-9 T 17-10-2018 IPR003646 SH3-like domain, bacterial-type FORC55_0432 cf2c87977a49cf8bc0f53e2fcf94a480 202 PIRSF PIRSF006158 1 202 4.7E-66 T 17-10-2018 IPR016476 SH3 domain protein FORC55_0432 cf2c87977a49cf8bc0f53e2fcf94a480 202 Pfam PF08239 Bacterial SH3 domain 31 81 1.7E-9 T 17-10-2018 IPR003646 SH3-like domain, bacterial-type FORC55_0432 cf2c87977a49cf8bc0f53e2fcf94a480 202 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 23 201 2.6E-50 T 17-10-2018 IPR016476 SH3 domain protein FORC55_0432 cf2c87977a49cf8bc0f53e2fcf94a480 202 Gene3D G3DSA:2.30.30.40 26 84 6.1E-9 T 17-10-2018 FORC55_3557 03e84f9feb02b412e992a6ff1a5ec9ed 425 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 99 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 FORC55_3557 03e84f9feb02b412e992a6ff1a5ec9ed 425 SUPERFAMILY SSF103473 25 412 7.46E-54 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_3557 03e84f9feb02b412e992a6ff1a5ec9ed 425 Pfam PF07690 Major Facilitator Superfamily 31 364 2.6E-40 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_3557 03e84f9feb02b412e992a6ff1a5ec9ed 425 Gene3D G3DSA:1.20.1250.20 26 406 2.1E-45 T 17-10-2018 FORC55_3066 0cc2248a8ea7c2b575dbf658dee4f0f6 362 Pfam PF05488 PAAR motif 7 79 6.6E-10 T 17-10-2018 IPR008727 PAAR motif FORC55_3066 0cc2248a8ea7c2b575dbf658dee4f0f6 362 Gene3D G3DSA:2.60.200.60 3 94 1.3E-5 T 17-10-2018 FORC55_1766 eccf0f907a9abfbe70b7d84c557c7041 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.15 T 17-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 FORC55_1766 eccf0f907a9abfbe70b7d84c557c7041 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 7.2E-65 T 17-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 FORC55_1766 eccf0f907a9abfbe70b7d84c557c7041 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 3.7E-90 T 17-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 FORC55_1766 eccf0f907a9abfbe70b7d84c557c7041 230 PIRSF PIRSF006102 1 220 2.8E-77 T 17-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 FORC55_3623 24a2370bf6be57c791b2e8ee7d2bcaf9 311 Gene3D G3DSA:3.30.360.10 119 311 5.1E-64 T 17-10-2018 FORC55_3623 24a2370bf6be57c791b2e8ee7d2bcaf9 311 SUPERFAMILY SSF51735 1 166 1.1E-40 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_3623 24a2370bf6be57c791b2e8ee7d2bcaf9 311 SUPERFAMILY SSF55347 121 264 9.81E-48 T 17-10-2018 FORC55_3623 24a2370bf6be57c791b2e8ee7d2bcaf9 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 1.7E-15 T 17-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 FORC55_3623 24a2370bf6be57c791b2e8ee7d2bcaf9 311 Gene3D G3DSA:3.40.50.720 1 118 1.4E-26 T 17-10-2018 FORC55_0443 883386cdcfff1af7e72dd476e16470a3 195 Gene3D G3DSA:3.40.50.1820 7 195 4.7E-63 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0443 883386cdcfff1af7e72dd476e16470a3 195 SUPERFAMILY SSF53474 6 193 1.2E-18 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0443 883386cdcfff1af7e72dd476e16470a3 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 193 2.3E-77 T 17-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA FORC55_0447 48e3263f8f898afa4dc7c0e0b9118929 246 SUPERFAMILY SSF160950 1 245 1.57E-92 T 17-10-2018 IPR036268 ZapD domain superfamily FORC55_0447 48e3263f8f898afa4dc7c0e0b9118929 246 Pfam PF07072 Cell division protein 18 224 6.1E-76 T 17-10-2018 IPR009777 Cell division protein ZapD FORC55_0447 48e3263f8f898afa4dc7c0e0b9118929 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.264 T 17-10-2018 IPR009777 Cell division protein ZapD FORC55_0447 48e3263f8f898afa4dc7c0e0b9118929 246 Gene3D G3DSA:1.10.3900.10 12 178 1.9E-83 T 17-10-2018 FORC55_0447 48e3263f8f898afa4dc7c0e0b9118929 246 Gene3D G3DSA:2.60.440.10 6 245 1.9E-83 T 17-10-2018 IPR027462 Z ring-associated protein D, C-terminal FORC55_2090 fee20bd68ef5bc0cbdf61078ba3b712b 101 Gene3D G3DSA:1.10.260.40 13 90 3.4E-12 T 17-10-2018 FORC55_2090 fee20bd68ef5bc0cbdf61078ba3b712b 101 Pfam PF13744 Helix-turn-helix domain 15 90 2.1E-12 T 17-10-2018 IPR039554 HigA2-like, helix-turn-helix domain FORC55_2090 fee20bd68ef5bc0cbdf61078ba3b712b 101 SMART SM00530 33 88 1.8E-6 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_2090 fee20bd68ef5bc0cbdf61078ba3b712b 101 SUPERFAMILY SSF47413 21 95 3.1E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_3291 003f853ab67eb8eddac65cdcedffff3f 126 Gene3D G3DSA:3.10.180.10 6 125 2.1E-22 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_3291 003f853ab67eb8eddac65cdcedffff3f 126 SUPERFAMILY SSF54593 1 125 9.35E-19 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase FORC55_1691 9ccf5e86e08d8796e12cbf1e21051b86 291 Gene3D G3DSA:1.10.3720.10 69 285 4.1E-22 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1691 9ccf5e86e08d8796e12cbf1e21051b86 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 291 1.0E-40 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1691 9ccf5e86e08d8796e12cbf1e21051b86 291 SUPERFAMILY SSF161098 73 276 2.29E-20 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2396 68c9e98fbc87bc77e5e9ed54c2c670a0 594 ProSitePatterns PS00284 Serpins signature. 18 28 - T 17-10-2018 IPR023795 Serpin, conserved site FORC55_2396 68c9e98fbc87bc77e5e9ed54c2c670a0 594 Pfam PF04932 O-Antigen ligase 221 366 2.0E-14 T 17-10-2018 IPR007016 O-antigen ligase-related FORC55_2396 68c9e98fbc87bc77e5e9ed54c2c670a0 594 Pfam PF15864 Protein glycosylation ligase 174 199 2.0E-11 T 17-10-2018 IPR031726 Protein glycosylation ligase domain FORC55_2396 68c9e98fbc87bc77e5e9ed54c2c670a0 594 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 387 575 1.0E-63 T 17-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal FORC55_3348 07e9027a4a658a1bf60d844da1abfc2d 330 SUPERFAMILY SSF53822 28 292 3.43E-33 T 17-10-2018 IPR028082 Periplasmic binding protein-like I FORC55_3348 07e9027a4a658a1bf60d844da1abfc2d 330 Gene3D G3DSA:3.40.50.2300 136 322 2.1E-112 T 17-10-2018 FORC55_3348 07e9027a4a658a1bf60d844da1abfc2d 330 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 28 326 4.9E-147 T 17-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT FORC55_3348 07e9027a4a658a1bf60d844da1abfc2d 330 Gene3D G3DSA:3.40.50.2300 29 298 2.1E-112 T 17-10-2018 FORC55_3348 07e9027a4a658a1bf60d844da1abfc2d 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 27 283 1.7E-31 T 17-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain FORC55_1941 cc00368ea7ba4358517b720348e0a517 227 PIRSF PIRSF028137 1 227 5.7E-102 T 17-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane FORC55_1699 83555b8feccef70226127b876438b1e2 192 Pfam PF04509 CheC-like family 9 43 8.4E-12 T 17-10-2018 IPR007597 CheC-like protein GO:0016787 FORC55_1699 83555b8feccef70226127b876438b1e2 192 SUPERFAMILY SSF103039 4 190 2.35E-31 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_1699 83555b8feccef70226127b876438b1e2 192 Gene3D G3DSA:3.40.1550.10 3 190 6.9E-32 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_2131 28e6cc3d9c233e48fb9af066df84ec49 289 Gene3D G3DSA:3.60.15.10 1 243 4.2E-64 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2131 28e6cc3d9c233e48fb9af066df84ec49 289 Pfam PF00753 Metallo-beta-lactamase superfamily 12 180 1.2E-11 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_2131 28e6cc3d9c233e48fb9af066df84ec49 289 SUPERFAMILY SSF56281 10 225 1.96E-42 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like FORC55_2131 28e6cc3d9c233e48fb9af066df84ec49 289 SMART SM00849 12 180 1.0E-20 T 17-10-2018 IPR001279 Metallo-beta-lactamase FORC55_2750 f508ddf3be7e3bb3add04a5b82fa6ad2 287 Gene3D G3DSA:1.10.3720.10 61 285 6.7E-35 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2750 f508ddf3be7e3bb3add04a5b82fa6ad2 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 1.4E-99 T 17-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 FORC55_2750 f508ddf3be7e3bb3add04a5b82fa6ad2 287 SUPERFAMILY SSF161098 21 274 9.16E-42 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2750 f508ddf3be7e3bb3add04a5b82fa6ad2 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 5.4E-26 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1132 5e10d929a3f3f0dbcddd845774189e39 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 8.0E-20 T 17-10-2018 IPR025346 Protein of unknown function DUF4250 FORC55_0925 907d1bc38c53f18b0cb3354e3f9c3797 258 Gene3D G3DSA:1.20.1260.10 97 258 6.6E-55 T 17-10-2018 IPR012347 Ferritin-like FORC55_0925 907d1bc38c53f18b0cb3354e3f9c3797 258 Gene3D G3DSA:1.20.1260.10 7 74 7.1E-16 T 17-10-2018 IPR012347 Ferritin-like FORC55_0925 907d1bc38c53f18b0cb3354e3f9c3797 258 SUPERFAMILY SSF47240 11 255 3.55E-74 T 17-10-2018 IPR009078 Ferritin-like superfamily FORC55_0925 907d1bc38c53f18b0cb3354e3f9c3797 258 PIRSF PIRSF020736 2 257 1.8E-93 T 17-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 FORC55_0925 907d1bc38c53f18b0cb3354e3f9c3797 258 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 252 6.5E-126 T 17-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 FORC55_0637 c87e5007528a2a53cc72e0b01eb72c7a 192 SUPERFAMILY SSF160443 92 174 1.15E-14 T 17-10-2018 IPR036063 Smr domain superfamily FORC55_0637 c87e5007528a2a53cc72e0b01eb72c7a 192 Gene3D G3DSA:3.30.1370.110 47 180 3.4E-43 T 17-10-2018 FORC55_0637 c87e5007528a2a53cc72e0b01eb72c7a 192 Pfam PF01713 Smr domain 94 174 8.8E-21 T 17-10-2018 IPR002625 Smr domain FORC55_0637 c87e5007528a2a53cc72e0b01eb72c7a 192 SMART SM00463 91 174 4.4E-12 T 17-10-2018 IPR002625 Smr domain FORC55_1253 5f5e1043d450bdb9fb716c6420f786bb 78 SUPERFAMILY SSF47336 2 76 2.88E-5 T 17-10-2018 IPR036736 ACP-like superfamily FORC55_1538 fac16fef175e5566c07a9e8c32307ad5 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 17-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1538 fac16fef175e5566c07a9e8c32307ad5 377 SUPERFAMILY SSF47240 3 341 1.03E-112 T 17-10-2018 IPR009078 Ferritin-like superfamily FORC55_1538 fac16fef175e5566c07a9e8c32307ad5 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 9.4E-49 T 17-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 FORC55_1538 fac16fef175e5566c07a9e8c32307ad5 377 Gene3D G3DSA:1.10.620.20 2 341 1.6E-145 T 17-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 FORC55_1409 7668cf7bee1e23b731150f3f6f85ec17 59 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 44 1.3E-21 T 17-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 FORC55_2325 3a05c8cd29bd3843a899ded092227568 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 5.2E-127 T 17-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 FORC55_2325 3a05c8cd29bd3843a899ded092227568 368 Gene3D G3DSA:3.30.450.90 1 97 6.3E-22 T 17-10-2018 FORC55_2325 3a05c8cd29bd3843a899ded092227568 368 Gene3D G3DSA:3.40.50.300 99 356 4.1E-88 T 17-10-2018 FORC55_2325 3a05c8cd29bd3843a899ded092227568 368 Pfam PF00437 Type II/IV secretion system protein 28 269 6.3E-38 T 17-10-2018 IPR001482 Type II/IV secretion system protein FORC55_2325 3a05c8cd29bd3843a899ded092227568 368 SUPERFAMILY SSF52540 4 334 1.5E-68 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_3535 82caeed7d0c59def46350b16b4a882a8 173 Pfam PF13302 Acetyltransferase (GNAT) domain 5 139 3.2E-19 T 17-10-2018 IPR000182 GNAT domain FORC55_3535 82caeed7d0c59def46350b16b4a882a8 173 Gene3D G3DSA:3.40.630.30 4 173 1.1E-51 T 17-10-2018 FORC55_3535 82caeed7d0c59def46350b16b4a882a8 173 SUPERFAMILY SSF55729 3 164 6.28E-40 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0327 b60b6856bfaffd32ce9afa2083932b7c 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 6.8E-110 T 17-10-2018 IPR021254 Protein of unknown function DUF2806 FORC55_0327 b60b6856bfaffd32ce9afa2083932b7c 299 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 2.8E-86 T 17-10-2018 IPR021254 Protein of unknown function DUF2806 FORC55_3092 c98337a9c5d4b68f7d6d6b3522641c0c 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 72 6.4E-7 T 17-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM FORC55_3092 c98337a9c5d4b68f7d6d6b3522641c0c 82 SUPERFAMILY SSF143120 12 70 6.93E-7 T 17-10-2018 IPR036165 YefM-like superfamily FORC55_0910 3907b2debc6db455e4917a79b2b00289 619 Pfam PF13624 SurA N-terminal domain 1 166 1.3E-49 T 17-10-2018 FORC55_0910 3907b2debc6db455e4917a79b2b00289 619 SUPERFAMILY SSF54534 224 361 9.16E-30 T 17-10-2018 FORC55_0910 3907b2debc6db455e4917a79b2b00289 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 17-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 FORC55_0910 3907b2debc6db455e4917a79b2b00289 619 SUPERFAMILY SSF109998 39 241 1.26E-37 T 17-10-2018 IPR027304 Trigger factor/SurA domain superfamily FORC55_0910 3907b2debc6db455e4917a79b2b00289 619 Gene3D G3DSA:3.10.50.40 262 386 4.6E-34 T 17-10-2018 FORC55_0910 3907b2debc6db455e4917a79b2b00289 619 Pfam PF13616 PPIC-type PPIASE domain 262 362 4.3E-25 T 17-10-2018 FORC55_0894 7126fcd806cbc0a4dd57104cd85987c0 310 Pfam PF01148 Cytidylyltransferase family 42 307 1.3E-68 T 17-10-2018 FORC55_0894 7126fcd806cbc0a4dd57104cd85987c0 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 17-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 FORC55_3615 ba93c72f7efd25bbbae51caa3d9ad113 265 Gene3D G3DSA:1.10.3720.10 47 260 4.7E-52 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3615 ba93c72f7efd25bbbae51caa3d9ad113 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 1.5E-22 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_3615 ba93c72f7efd25bbbae51caa3d9ad113 265 SUPERFAMILY SSF161098 58 245 2.88E-42 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3615 ba93c72f7efd25bbbae51caa3d9ad113 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 258 1.9E-19 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3418 37c303efe9b4642b798c6d5910f856e4 73 SUPERFAMILY SSF57783 15 48 1.53E-5 T 17-10-2018 FORC55_0108 744666020dd18f8ce0564c4f9b28d485 198 Pfam PF03942 DTW domain 4 184 5.5E-45 T 17-10-2018 IPR005636 DTW FORC55_0108 744666020dd18f8ce0564c4f9b28d485 198 SMART SM01144 1 191 2.4E-53 T 17-10-2018 IPR005636 DTW FORC55_3341 6616f69d5e92d23db91c4af38afa45cd 225 Pfam PF07947 YhhN family 44 223 8.7E-51 T 17-10-2018 IPR012506 YhhN-like GO:0016021 FORC55_2358 2e8c13737eb266224f8028b2092791f3 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 319 9.0E-112 T 17-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family FORC55_2358 2e8c13737eb266224f8028b2092791f3 322 Gene3D G3DSA:3.40.190.10 30 319 3.2E-111 T 17-10-2018 FORC55_2358 2e8c13737eb266224f8028b2092791f3 322 Gene3D G3DSA:3.40.190.10 117 255 3.2E-111 T 17-10-2018 FORC55_2358 2e8c13737eb266224f8028b2092791f3 322 Pfam PF16868 NMT1-like family 30 319 1.7E-97 T 17-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family FORC55_2358 2e8c13737eb266224f8028b2092791f3 322 SUPERFAMILY SSF53850 25 321 5.2E-89 T 17-10-2018 FORC55_2868 d899348caacc56e8737b71ee698ae67b 334 SUPERFAMILY SSF103039 141 329 3.27E-38 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_2868 d899348caacc56e8737b71ee698ae67b 334 SUPERFAMILY SSF52172 4 121 2.28E-27 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_2868 d899348caacc56e8737b71ee698ae67b 334 SMART SM00448 3 115 9.5E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_2868 d899348caacc56e8737b71ee698ae67b 334 Gene3D G3DSA:3.40.1550.10 139 328 3.7E-30 T 17-10-2018 IPR028976 CheC-like superfamily FORC55_2868 d899348caacc56e8737b71ee698ae67b 334 Gene3D G3DSA:3.40.50.2300 3 125 5.1E-26 T 17-10-2018 FORC55_2868 d899348caacc56e8737b71ee698ae67b 334 Pfam PF00072 Response regulator receiver domain 5 114 1.8E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_3640 541b07d90777bd8eef0cc0f6fb71dde1 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 3.4E-77 T 17-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_3640 541b07d90777bd8eef0cc0f6fb71dde1 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 7.8E-80 T 17-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_3640 541b07d90777bd8eef0cc0f6fb71dde1 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.44 T 17-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 FORC55_3640 541b07d90777bd8eef0cc0f6fb71dde1 218 Gene3D G3DSA:3.90.870.10 6 218 2.6E-90 T 17-10-2018 FORC55_3640 541b07d90777bd8eef0cc0f6fb71dde1 218 SUPERFAMILY SSF55821 10 213 2.24E-81 T 17-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily FORC55_2262 37bf4123af6ad07e6c85f29f5168e159 153 Pfam PF09335 SNARE associated Golgi protein 50 148 6.5E-10 T 17-10-2018 IPR032816 SNARE associated Golgi protein FORC55_1710 5c96558b0d3343aed078440ea3cf8728 409 Gene3D G3DSA:1.20.1250.20 208 405 3.3E-12 T 17-10-2018 FORC55_1710 5c96558b0d3343aed078440ea3cf8728 409 SUPERFAMILY SSF103473 8 400 2.75E-31 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_1710 5c96558b0d3343aed078440ea3cf8728 409 Pfam PF07690 Major Facilitator Superfamily 21 338 3.4E-14 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_1710 5c96558b0d3343aed078440ea3cf8728 409 Gene3D G3DSA:1.20.1250.20 6 200 8.3E-13 T 17-10-2018 FORC55_1216 763750659a31dc9dabdc46b34ce3fd4f 182 Pfam PF07209 Protein of unknown function (DUF1415) 6 173 1.4E-66 T 17-10-2018 IPR009858 Protein of unknown function DUF1415 FORC55_0411 8229ea7e9f46d84ea4df257476bb44d1 156 PIRSF PIRSF004923 1 156 1.5E-39 T 17-10-2018 IPR026268 Protein RseC FORC55_0411 8229ea7e9f46d84ea4df257476bb44d1 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 14 149 3.8E-33 T 17-10-2018 FORC55_3519 66e0936b82386b2f410b5676abe5e2c7 311 Pfam PF05661 Protein of unknown function (DUF808) 4 302 6.2E-113 T 17-10-2018 IPR008526 Inner membrane protein YedI FORC55_3519 66e0936b82386b2f410b5676abe5e2c7 311 PIRSF PIRSF016660 1 311 2.5E-118 T 17-10-2018 IPR008526 Inner membrane protein YedI FORC55_1019 5886af6185b626999cdac4761fedc5ff 413 Pfam PF04403 Paraquat-inducible protein A 247 405 7.7E-54 T 17-10-2018 IPR007498 Intermembrane transport protein PqiA-like FORC55_1019 5886af6185b626999cdac4761fedc5ff 413 Pfam PF04403 Paraquat-inducible protein A 31 191 8.7E-38 T 17-10-2018 IPR007498 Intermembrane transport protein PqiA-like FORC55_1019 5886af6185b626999cdac4761fedc5ff 413 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 3 404 1.1E-97 T 17-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type FORC55_1155 8019c26f8f9a0db00751e437cf9709d6 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 294 8.7E-23 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_1155 8019c26f8f9a0db00751e437cf9709d6 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.0E-14 T 17-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain FORC55_1155 8019c26f8f9a0db00751e437cf9709d6 295 SUPERFAMILY SSF161098 89 276 1.3E-23 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1155 8019c26f8f9a0db00751e437cf9709d6 295 Gene3D G3DSA:1.10.3720.10 84 291 3.9E-20 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_0711 d9bf87a2afc6538c9ed81e9bb7b8ad4f 666 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 2.4E-21 T 17-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 FORC55_0711 d9bf87a2afc6538c9ed81e9bb7b8ad4f 666 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 430 655 2.0E-55 T 17-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 FORC55_0711 d9bf87a2afc6538c9ed81e9bb7b8ad4f 666 Pfam PF07196 Flagellin hook IN motif 125 178 1.6E-7 T 17-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 FORC55_2161 7aad80a9f9286082c63b1e89f3712463 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 17-10-2018 IPR025668 Transposase DDE domain FORC55_1391 7aad80a9f9286082c63b1e89f3712463 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 17-10-2018 IPR025668 Transposase DDE domain FORC55_3331 7aad80a9f9286082c63b1e89f3712463 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 17-10-2018 IPR025668 Transposase DDE domain FORC55_2946 7aad80a9f9286082c63b1e89f3712463 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 17-10-2018 IPR025668 Transposase DDE domain FORC55_3118 7aad80a9f9286082c63b1e89f3712463 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 17-10-2018 IPR025668 Transposase DDE domain FORC55_0813 3daf6e50206d53d81b730f5952dee00b 519 SUPERFAMILY SSF52091 415 497 1.16E-10 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_0813 3daf6e50206d53d81b730f5952dee00b 519 Pfam PF00916 Sulfate permease family 13 374 1.3E-56 T 17-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 FORC55_0813 3daf6e50206d53d81b730f5952dee00b 519 Pfam PF01740 STAS domain 415 509 5.3E-6 T 17-10-2018 IPR002645 STAS domain FORC55_0813 3daf6e50206d53d81b730f5952dee00b 519 Gene3D G3DSA:3.30.750.24 409 499 7.3E-27 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_0794 385e64061a4cd5080e23d9e6596505ca 184 SUPERFAMILY SSF52833 46 177 4.15E-39 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0794 385e64061a4cd5080e23d9e6596505ca 184 Gene3D G3DSA:3.40.30.10 20 184 1.5E-46 T 17-10-2018 FORC55_0794 385e64061a4cd5080e23d9e6596505ca 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 FORC55_0794 385e64061a4cd5080e23d9e6596505ca 184 Pfam PF08534 Redoxin 41 163 1.2E-27 T 17-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 FORC55_0794 385e64061a4cd5080e23d9e6596505ca 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 4.5E-73 T 17-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 FORC55_0380 781deba250cdb4c8273eadc233ef4da0 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.6E-131 T 17-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 FORC55_0380 781deba250cdb4c8273eadc233ef4da0 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 352 2.1E-66 T 17-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 Gene3D G3DSA:1.10.10.10 1 91 9.0E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 Gene3D G3DSA:3.40.190.290 92 294 2.4E-21 T 17-10-2018 FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 SUPERFAMILY SSF46785 1 85 1.31E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 Pfam PF03466 LysR substrate binding domain 91 286 7.4E-23 T 17-10-2018 IPR005119 LysR, substrate-binding FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.1E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.1E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.1E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 SUPERFAMILY SSF53850 91 292 5.43E-23 T 17-10-2018 FORC55_2584 9d974916da38aafd9ffdd977dd9250ec 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.5E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 FORC55_1527 38239fa328b3df9c73c9bf2dec2b3538 461 Gene3D G3DSA:1.10.760.10 316 461 7.6E-10 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_1527 38239fa328b3df9c73c9bf2dec2b3538 461 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 21 461 1.3E-144 T 17-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase FORC55_1527 38239fa328b3df9c73c9bf2dec2b3538 461 PIRSF PIRSF028099 3 461 3.3E-186 T 17-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase FORC55_1527 38239fa328b3df9c73c9bf2dec2b3538 461 SUPERFAMILY SSF46626 319 461 1.31E-22 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_1888 9ea2aa6003520c3a08255607569e68be 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.674 T 17-10-2018 IPR003791 Protein of unknown function UPF0178 FORC55_1888 9ea2aa6003520c3a08255607569e68be 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 5.1E-48 T 17-10-2018 IPR003791 Protein of unknown function UPF0178 FORC55_0939 78644aaa5dbf775b87faf60203d36ca0 116 Pfam PF01230 HIT domain 12 109 1.1E-28 T 17-10-2018 IPR001310 Histidine triad (HIT) protein FORC55_0939 78644aaa5dbf775b87faf60203d36ca0 116 SUPERFAMILY SSF54197 2 113 2.01E-34 T 17-10-2018 IPR036265 HIT-like superfamily FORC55_0939 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 27 45 1.3E-18 T 17-10-2018 IPR001310 Histidine triad (HIT) protein FORC55_0939 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 6 22 1.3E-18 T 17-10-2018 IPR001310 Histidine triad (HIT) protein FORC55_0939 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 95 105 1.3E-18 T 17-10-2018 IPR001310 Histidine triad (HIT) protein FORC55_0939 78644aaa5dbf775b87faf60203d36ca0 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 17-10-2018 IPR019808 Histidine triad, conserved site FORC55_0939 78644aaa5dbf775b87faf60203d36ca0 116 Gene3D G3DSA:3.30.428.10 1 111 6.3E-34 T 17-10-2018 IPR036265 HIT-like superfamily FORC55_1594 964422bfaa588141cbc8d5d1534191f3 132 SUPERFAMILY SSF52540 29 125 8.5E-8 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1594 964422bfaa588141cbc8d5d1534191f3 132 Gene3D G3DSA:3.40.50.300 19 126 8.7E-12 T 17-10-2018 FORC55_1012 06bdf9767311b587a942616d03d67adb 131 Pfam PF04134 Protein of unknown function, DUF393 8 116 1.2E-23 T 17-10-2018 IPR007263 Protein of unknown function DUF393 FORC55_2537 16c7988f8f0ecc0841ba0e4e375363b0 386 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 383 4.2E-169 T 17-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase FORC55_2537 16c7988f8f0ecc0841ba0e4e375363b0 386 SUPERFAMILY SSF53383 2 384 1.64E-110 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2537 16c7988f8f0ecc0841ba0e4e375363b0 386 Gene3D G3DSA:3.40.640.10 1 259 7.4E-87 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2537 16c7988f8f0ecc0841ba0e4e375363b0 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 380 1.3E-102 T 17-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase FORC55_2537 16c7988f8f0ecc0841ba0e4e375363b0 386 Gene3D G3DSA:3.90.1150.10 262 385 4.1E-34 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 FORC55_2537 16c7988f8f0ecc0841ba0e4e375363b0 386 PIRSF PIRSF000390 1 386 9.9E-103 T 17-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase FORC55_2182 7eeb6222c34580d3a93ddb4c5f8f3416 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.6E-46 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 FORC55_2182 7eeb6222c34580d3a93ddb4c5f8f3416 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.6E-46 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 FORC55_2182 7eeb6222c34580d3a93ddb4c5f8f3416 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.6E-46 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 FORC55_2182 7eeb6222c34580d3a93ddb4c5f8f3416 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.6E-46 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 FORC55_2182 7eeb6222c34580d3a93ddb4c5f8f3416 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.3E-26 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 FORC55_2182 7eeb6222c34580d3a93ddb4c5f8f3416 111 Pfam PF03840 Preprotein translocase SecG subunit 4 72 6.6E-23 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 FORC55_2979 422fac540e60ab2358b7b06db9d88800 557 SUPERFAMILY SSF53383 50 554 8.62E-72 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase FORC55_2979 422fac540e60ab2358b7b06db9d88800 557 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 97 461 2.7E-31 T 17-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 FORC55_2979 422fac540e60ab2358b7b06db9d88800 557 Gene3D G3DSA:3.40.640.10 117 440 1.1E-57 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 FORC55_2052 9fbb1524658b6c1e33bc34afe80eb4d1 144 Gene3D G3DSA:2.40.10.330 72 129 1.2E-42 T 17-10-2018 FORC55_2052 9fbb1524658b6c1e33bc34afe80eb4d1 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 140 5.6E-13 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain FORC55_2052 9fbb1524658b6c1e33bc34afe80eb4d1 144 Gene3D G3DSA:3.10.50.40 13 141 1.2E-42 T 17-10-2018 FORC55_2052 9fbb1524658b6c1e33bc34afe80eb4d1 144 SUPERFAMILY SSF54534 4 143 4.12E-39 T 17-10-2018 FORC55_1123 b5f926274f3d84db159e22264affeba6 246 SMART SM01252 7 101 4.6E-24 T 17-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding FORC55_1123 b5f926274f3d84db159e22264affeba6 246 Pfam PF10552 ORF6C domain 99 167 8.7E-7 T 17-10-2018 IPR018878 ORF6C domain FORC55_1123 b5f926274f3d84db159e22264affeba6 246 Pfam PF04383 KilA-N domain 11 98 3.0E-17 T 17-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding FORC55_0958 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.867 T 17-10-2018 IPR038053 Uncharacterised protein family UPF0434 FORC55_0958 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 SUPERFAMILY SSF158997 1 54 1.83E-20 T 17-10-2018 FORC55_0958 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Gene3D G3DSA:2.20.25.10 8 59 4.1E-24 T 17-10-2018 FORC55_0958 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Pfam PF03966 Trm112p-like protein 2 41 3.3E-11 T 17-10-2018 IPR005651 Trm112-like FORC55_2538 8dae841e73863898764060cb13311a14 431 Pfam PF01943 Polysaccharide biosynthesis protein 16 277 6.8E-6 T 17-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 FORC55_1865 a36c72e03af599d5dca36bf760dc5c48 269 PIRSF PIRSF002854 1 269 1.5E-100 T 17-10-2018 IPR004872 Lipoprotein NlpA family FORC55_1865 a36c72e03af599d5dca36bf760dc5c48 269 Pfam PF03180 NLPA lipoprotein 33 269 1.3E-98 T 17-10-2018 IPR004872 Lipoprotein NlpA family FORC55_1865 a36c72e03af599d5dca36bf760dc5c48 269 Gene3D G3DSA:3.40.190.10 34 263 9.2E-94 T 17-10-2018 FORC55_1865 a36c72e03af599d5dca36bf760dc5c48 269 Gene3D G3DSA:3.40.190.10 115 219 9.2E-94 T 17-10-2018 FORC55_1865 a36c72e03af599d5dca36bf760dc5c48 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 5.9E-125 T 17-10-2018 IPR004872 Lipoprotein NlpA family FORC55_1865 a36c72e03af599d5dca36bf760dc5c48 269 SUPERFAMILY SSF53850 32 269 6.29E-80 T 17-10-2018 FORC55_3222 1413336a8210752b7df93ff7d56182d7 130 Gene3D G3DSA:3.30.1330.80 1 130 1.4E-51 T 17-10-2018 FORC55_3222 1413336a8210752b7df93ff7d56182d7 130 SUPERFAMILY SSF117856 4 129 1.23E-35 T 17-10-2018 FORC55_3222 1413336a8210752b7df93ff7d56182d7 130 Pfam PF03479 Domain of unknown function (DUF296) 5 108 7.2E-24 T 17-10-2018 IPR005175 PPC domain FORC55_0929 b27a6c954a7f14c9b2d6be7853c17872 398 Gene3D G3DSA:3.40.50.150 105 209 2.9E-5 T 17-10-2018 FORC55_0929 b27a6c954a7f14c9b2d6be7853c17872 398 Pfam PF13679 Methyltransferase domain 106 230 9.6E-18 T 17-10-2018 IPR025714 Methyltransferase domain FORC55_0929 b27a6c954a7f14c9b2d6be7853c17872 398 SUPERFAMILY SSF53335 102 182 7.72E-7 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_1457 b6d26b8cfb8b9c2dc129100680a9aa9f 400 Gene3D G3DSA:3.10.310.10 182 372 1.1E-145 T 17-10-2018 FORC55_1457 b6d26b8cfb8b9c2dc129100680a9aa9f 400 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 6 391 7.3E-224 T 17-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 FORC55_1457 b6d26b8cfb8b9c2dc129100680a9aa9f 400 SUPERFAMILY SSF54506 4 183 3.53E-70 T 17-10-2018 FORC55_1457 b6d26b8cfb8b9c2dc129100680a9aa9f 400 Pfam PF04303 PrpF protein 7 389 1.3E-182 T 17-10-2018 IPR007400 PrpF protein FORC55_1457 b6d26b8cfb8b9c2dc129100680a9aa9f 400 SUPERFAMILY SSF54506 186 391 4.08E-75 T 17-10-2018 FORC55_1457 b6d26b8cfb8b9c2dc129100680a9aa9f 400 Gene3D G3DSA:3.10.310.10 12 386 1.1E-145 T 17-10-2018 FORC55_1172 0ea55051fe429b62dcbd6f93993c45ca 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 FORC55_1172 0ea55051fe429b62dcbd6f93993c45ca 204 Gene3D G3DSA:1.20.120.1760 2 200 2.9E-20 T 17-10-2018 FORC55_1172 0ea55051fe429b62dcbd6f93993c45ca 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.3E-10 T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 FORC55_1301 0b9fbcee938bac046df5f72db6fcd301 271 Gene3D G3DSA:3.40.190.10 30 254 1.7E-97 T 17-10-2018 FORC55_1301 0b9fbcee938bac046df5f72db6fcd301 271 Gene3D G3DSA:3.40.190.10 105 217 1.7E-97 T 17-10-2018 FORC55_1301 0b9fbcee938bac046df5f72db6fcd301 271 Pfam PF12849 PBP superfamily domain 23 246 5.5E-31 T 17-10-2018 IPR024370 PBP domain FORC55_1301 0b9fbcee938bac046df5f72db6fcd301 271 SUPERFAMILY SSF53850 27 256 1.46E-32 T 17-10-2018 FORC55_2745 6479dbdd068ee6d78cabc89317c3b481 768 SUPERFAMILY SSF55486 170 485 4.1E-34 T 17-10-2018 FORC55_2745 6479dbdd068ee6d78cabc89317c3b481 768 Gene3D G3DSA:2.60.120.260 616 747 6.7E-14 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_2745 6479dbdd068ee6d78cabc89317c3b481 768 Pfam PF01483 Proprotein convertase P-domain 629 713 3.8E-17 T 17-10-2018 IPR002884 P domain GO:0004252|GO:0006508 FORC55_2745 6479dbdd068ee6d78cabc89317c3b481 768 SUPERFAMILY SSF49785 595 712 1.57E-16 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily FORC55_1165 5f64faae87ac2b7d4f7b3ced790bf1b3 191 Gene3D G3DSA:1.10.340.30 6 189 7.7E-78 T 17-10-2018 FORC55_1165 5f64faae87ac2b7d4f7b3ced790bf1b3 191 Pfam PF03352 Methyladenine glycosylase 10 184 1.4E-73 T 17-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 FORC55_1165 5f64faae87ac2b7d4f7b3ced790bf1b3 191 SUPERFAMILY SSF48150 8 186 2.28E-74 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 FORC55_0702 db6f7b002bbcf06fff369ca8e0893f4d 95 PIRSF PIRSF037266 1 94 4.8E-42 T 17-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 FORC55_0702 db6f7b002bbcf06fff369ca8e0893f4d 95 Gene3D G3DSA:1.10.10.10 2 95 4.8E-38 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_0702 db6f7b002bbcf06fff369ca8e0893f4d 95 Pfam PF09904 Winged helix-turn helix 4 91 3.2E-39 T 17-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 FORC55_3617 c642d71b3d084c812131ddaa90ef569c 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 291 2.5E-18 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3617 c642d71b3d084c812131ddaa90ef569c 298 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 62 131 5.8E-14 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_3617 c642d71b3d084c812131ddaa90ef569c 298 Gene3D G3DSA:1.10.3720.10 57 294 5.9E-49 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3617 c642d71b3d084c812131ddaa90ef569c 298 SUPERFAMILY SSF161098 63 281 1.96E-38 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 2.4E-11 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 2.4E-11 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.4E-11 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 Gene3D G3DSA:1.10.1200.120 3 134 1.5E-43 T 17-10-2018 IPR036019 Gated mechanosensitive channel FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 4.4E-46 T 17-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.074 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 1.3E-50 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 17-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site FORC55_3257 60f3c89a293221677ba244d7e017d0c5 136 SUPERFAMILY SSF81330 13 127 9.15E-36 T 17-10-2018 IPR036019 Gated mechanosensitive channel FORC55_3269 f34dab279619aae275b56576e9b0d833 457 Pfam PF00593 TonB dependent receptor 23 455 9.3E-35 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel FORC55_3269 f34dab279619aae275b56576e9b0d833 457 SUPERFAMILY SSF56935 13 456 1.74E-36 T 17-10-2018 FORC55_3269 f34dab279619aae275b56576e9b0d833 457 Gene3D G3DSA:2.40.170.20 2 457 4.6E-67 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily FORC55_3410 32f9c3e8dba2a2d2d3b39f19df5b959e 815 Pfam PF02687 FtsX-like permease family 722 799 4.8E-6 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 FORC55_0631 8c1715e45b410a4de8eb46ec589d4bea 281 Pfam PF13230 Glutamine amidotransferases class-II 1 255 2.2E-112 T 17-10-2018 IPR026869 Putative glutamine amidotransferase type 2 FORC55_0631 8c1715e45b410a4de8eb46ec589d4bea 281 SUPERFAMILY SSF56235 2 253 1.45E-50 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_0631 8c1715e45b410a4de8eb46ec589d4bea 281 Gene3D G3DSA:3.60.20.10 1 258 5.1E-99 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal FORC55_2832 87eefe45cd8d04fe0d27236f6dacba35 107 Pfam PF03334 Na+/H+ antiporter subunit 8 85 2.7E-24 T 17-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 FORC55_2832 87eefe45cd8d04fe0d27236f6dacba35 107 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 8 95 2.1E-26 T 17-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 FORC55_0863 f54869d9d0ac990d1662034eb249648c 434 SUPERFAMILY SSF56322 28 424 1.19E-99 T 17-10-2018 IPR005801 ADC synthase GO:0009058 FORC55_0863 f54869d9d0ac990d1662034eb249648c 434 Hamap MF_01935 Isochorismate synthase MenF [menF]. 2 426 31.489 T 17-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 FORC55_0863 f54869d9d0ac990d1662034eb249648c 434 Gene3D G3DSA:3.60.120.10 3 428 2.1E-128 T 17-10-2018 IPR005801 ADC synthase GO:0009058 FORC55_0863 f54869d9d0ac990d1662034eb249648c 434 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 84 423 1.1E-104 T 17-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 FORC55_0863 f54869d9d0ac990d1662034eb249648c 434 Pfam PF00425 chorismate binding enzyme 164 416 2.0E-71 T 17-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal FORC55_3097 fb30546a2ed105f9aa2fdb518a9cc16c 160 Gene3D G3DSA:3.40.630.30 1 157 3.1E-18 T 17-10-2018 FORC55_3097 fb30546a2ed105f9aa2fdb518a9cc16c 160 Pfam PF13302 Acetyltransferase (GNAT) domain 54 135 9.5E-12 T 17-10-2018 IPR000182 GNAT domain FORC55_3097 fb30546a2ed105f9aa2fdb518a9cc16c 160 SUPERFAMILY SSF55729 3 140 8.27E-18 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_2639 bc39836f756865d68818d454d7329f67 210 SUPERFAMILY SSF54980 138 201 5.83E-9 T 17-10-2018 IPR035647 EF-G domain III/V-like FORC55_2639 bc39836f756865d68818d454d7329f67 210 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.4E-25 T 17-10-2018 IPR001498 Impact, N-terminal FORC55_2639 bc39836f756865d68818d454d7329f67 210 SUPERFAMILY SSF54211 4 134 3.49E-43 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold FORC55_2639 bc39836f756865d68818d454d7329f67 210 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 4 201 6.1E-66 T 17-10-2018 IPR015796 Impact family, bacterial/archaeal FORC55_2639 bc39836f756865d68818d454d7329f67 210 Gene3D G3DSA:3.30.230.30 2 136 2.2E-48 T 17-10-2018 IPR036956 Impact, N-terminal domain superfamily FORC55_2639 bc39836f756865d68818d454d7329f67 210 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 1.1E-11 T 17-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal FORC55_2639 bc39836f756865d68818d454d7329f67 210 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 17-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site FORC55_0356 2ce516dd5d53150393b3c0b743532923 185 SUPERFAMILY SSF56784 21 178 3.47E-40 T 17-10-2018 IPR036412 HAD-like superfamily FORC55_0356 2ce516dd5d53150393b3c0b743532923 185 Gene3D G3DSA:3.40.50.1000 1 177 8.6E-60 T 17-10-2018 IPR023214 HAD superfamily FORC55_0356 2ce516dd5d53150393b3c0b743532923 185 PIRSF PIRSF006118 10 185 2.1E-74 T 17-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 FORC55_0356 2ce516dd5d53150393b3c0b743532923 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 2.2E-8 T 17-10-2018 FORC55_0356 2ce516dd5d53150393b3c0b743532923 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 1.5E-62 T 17-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 FORC55_1487 064d3bfdabbe4e7035d13b7ce06dfccb 339 Pfam PF05128 Domain of unknown function (DUF697) 175 333 2.0E-49 T 17-10-2018 IPR021147 Protein of unknown function DUF697 FORC55_1487 064d3bfdabbe4e7035d13b7ce06dfccb 339 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 67 333 8.7E-70 T 17-10-2018 IPR006507 Uncharacterised protein family UPF0283 FORC55_0332 77b5b384ef6d0446f3c69b0f7c4bf950 96 Pfam PF10795 Protein of unknown function (DUF2607) 5 94 1.3E-39 T 17-10-2018 IPR019731 Protein of unknown function DUF2607 FORC55_1925 cf0b5040187fa1bf72a5ac53c670aaa2 172 SUPERFAMILY SSF141452 3 168 5.62E-41 T 17-10-2018 IPR036624 Hcp1-like superfamily FORC55_1925 cf0b5040187fa1bf72a5ac53c670aaa2 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 4.0E-65 T 17-10-2018 IPR008514 Type VI secretion system effector, Hcp FORC55_1925 cf0b5040187fa1bf72a5ac53c670aaa2 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.4E-34 T 17-10-2018 IPR008514 Type VI secretion system effector, Hcp FORC55_1925 cf0b5040187fa1bf72a5ac53c670aaa2 172 Gene3D G3DSA:2.30.110.20 2 172 4.4E-69 T 17-10-2018 IPR036624 Hcp1-like superfamily FORC55_3662 4ea4de02eba0ba4ebaaa0f000b2522da 99 Gene3D G3DSA:3.30.750.24 2 99 2.3E-17 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_3662 4ea4de02eba0ba4ebaaa0f000b2522da 99 Pfam PF13466 STAS domain 18 90 3.1E-10 T 17-10-2018 IPR002645 STAS domain FORC55_3662 4ea4de02eba0ba4ebaaa0f000b2522da 99 SUPERFAMILY SSF52091 6 98 7.26E-20 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_3203 74f2260d902f4c274e6da9062b3f25fc 53 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 9.1E-27 T 17-10-2018 IPR005371 Uncharacterised protein family UPF0181 FORC55_3203 74f2260d902f4c274e6da9062b3f25fc 53 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 49 5.0E-20 T 17-10-2018 IPR005371 Uncharacterised protein family UPF0181 FORC55_3203 74f2260d902f4c274e6da9062b3f25fc 53 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 53 17.849 T 17-10-2018 IPR005371 Uncharacterised protein family UPF0181 FORC55_0144 8ca925813a3ac643fad320ce502c7467 309 Pfam PF03631 Virulence factor BrkB 28 276 2.5E-60 T 17-10-2018 IPR017039 Virulence factor BrkB FORC55_0144 8ca925813a3ac643fad320ce502c7467 309 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 1.7E-80 T 17-10-2018 IPR017039 Virulence factor BrkB FORC55_0144 8ca925813a3ac643fad320ce502c7467 309 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 16 294 23.643 T 17-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial FORC55_0144 8ca925813a3ac643fad320ce502c7467 309 PIRSF PIRSF035875 1 294 1.4E-53 T 17-10-2018 IPR017039 Virulence factor BrkB FORC55_2875 6f0b7fd5dad8cd1a31c10122ae82eb79 121 SUPERFAMILY SSF56925 28 118 7.59E-9 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel FORC55_2875 6f0b7fd5dad8cd1a31c10122ae82eb79 121 Gene3D G3DSA:2.40.160.20 18 120 1.2E-5 T 17-10-2018 FORC55_3548 1200f4bb6eaf646ed80ba89b88ddc6ec 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 23 199 8.1E-37 T 17-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like FORC55_3548 1200f4bb6eaf646ed80ba89b88ddc6ec 202 SUPERFAMILY SSF51197 9 201 6.68E-66 T 17-10-2018 FORC55_3548 1200f4bb6eaf646ed80ba89b88ddc6ec 202 Gene3D G3DSA:2.60.120.590 9 202 1.6E-67 T 17-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily FORC55_3622 e9293bdb7bf98603e1fd5fef1f33bd20 193 Pfam PF05068 Mannitol repressor 24 188 2.8E-63 T 17-10-2018 IPR007761 Mannitol repressor MtlR-like FORC55_3622 e9293bdb7bf98603e1fd5fef1f33bd20 193 SUPERFAMILY SSF158668 22 187 7.06E-59 T 17-10-2018 IPR038026 MtlR-like superfamily FORC55_3622 e9293bdb7bf98603e1fd5fef1f33bd20 193 Gene3D G3DSA:1.20.120.330 16 189 1.3E-70 T 17-10-2018 FORC55_1323 c3871c1b7dce0e56490daed1f3e80017 414 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 405 5.8E-104 T 17-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type FORC55_1323 c3871c1b7dce0e56490daed1f3e80017 414 Pfam PF04403 Paraquat-inducible protein A 252 406 1.1E-49 T 17-10-2018 IPR007498 Intermembrane transport protein PqiA-like FORC55_1323 c3871c1b7dce0e56490daed1f3e80017 414 Pfam PF04403 Paraquat-inducible protein A 58 208 1.2E-37 T 17-10-2018 IPR007498 Intermembrane transport protein PqiA-like FORC55_2879 547b7198b0c8324b66f7e303f4dfda19 411 SUPERFAMILY SSF56300 1 305 3.66E-34 T 17-10-2018 FORC55_2879 547b7198b0c8324b66f7e303f4dfda19 411 Pfam PF00149 Calcineurin-like phosphoesterase 1 252 5.8E-17 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 FORC55_2879 547b7198b0c8324b66f7e303f4dfda19 411 Gene3D G3DSA:3.60.21.10 1 297 3.1E-25 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like FORC55_2248 2270126eb4ee66a0dae54a2a2e0d575f 145 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 1.8E-45 T 17-10-2018 IPR009386 Protein of unknown function DUF1043 FORC55_2248 2270126eb4ee66a0dae54a2a2e0d575f 145 PIRSF PIRSF006318 1 134 9.9E-53 T 17-10-2018 IPR009386 Protein of unknown function DUF1043 FORC55_3068 529661d3f73315e2c19d021318b1827b 56 Pfam PF04875 Protein of unknown function, DUF645 27 56 2.3E-15 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_1924 2cad527452bda017a26b8d75563ac96f 264 PIRSF PIRSF015558 1 263 2.4E-58 T 17-10-2018 IPR016634 WYL domain protein, s026 type FORC55_1924 2cad527452bda017a26b8d75563ac96f 264 Pfam PF13280 WYL domain 101 215 4.3E-10 T 17-10-2018 IPR026881 WYL domain FORC55_1446 f5b70b77adea2c48a55c69e021cd94ea 249 SUPERFAMILY SSF55781 103 242 1.86E-8 T 17-10-2018 FORC55_1294 0edcaa8be01664db07f12cba002ae24e 273 Pfam PF03942 DTW domain 57 243 6.0E-40 T 17-10-2018 IPR005636 DTW FORC55_1294 0edcaa8be01664db07f12cba002ae24e 273 SMART SM01144 55 249 3.5E-63 T 17-10-2018 IPR005636 DTW FORC55_2624 0a1d351308d19ab3706395e3438b29b6 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 6.7E-38 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2624 0a1d351308d19ab3706395e3438b29b6 325 Gene3D G3DSA:1.10.3720.10 84 314 1.8E-18 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2624 0a1d351308d19ab3706395e3438b29b6 325 SUPERFAMILY SSF161098 90 302 1.05E-16 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2790 820e90fa28cc40358b182fb61eeb6c55 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 1.0E-157 T 17-10-2018 IPR010263 Type VI secretion protein, VC_A0114 FORC55_2790 820e90fa28cc40358b182fb61eeb6c55 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 2.3E-156 T 17-10-2018 IPR010263 Type VI secretion protein, VC_A0114 FORC55_3044 cdb639533ed0acf757d9f2335a78073b 131 Pfam PF11948 Protein of unknown function (DUF3465) 11 131 8.8E-60 T 17-10-2018 IPR021856 Protein of unknown function DUF3465 FORC55_1353 3b9d27225e8c8bc15924e2e55dace186 153 Pfam PF02794 RTX toxin acyltransferase family 18 150 4.6E-45 T 17-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 FORC55_1353 3b9d27225e8c8bc15924e2e55dace186 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 20 36 2.3E-6 T 17-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 FORC55_1353 3b9d27225e8c8bc15924e2e55dace186 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 85 107 2.3E-6 T 17-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 FORC55_1353 3b9d27225e8c8bc15924e2e55dace186 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 63 81 2.3E-6 T 17-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 FORC55_0363 0820d1501a6c7bb4e9123a4eb5513df5 109 Gene3D G3DSA:3.30.750.24 8 100 3.3E-12 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_0363 0820d1501a6c7bb4e9123a4eb5513df5 109 SUPERFAMILY SSF52091 1 97 2.94E-17 T 17-10-2018 IPR036513 STAS domain superfamily FORC55_0363 0820d1501a6c7bb4e9123a4eb5513df5 109 Pfam PF13466 STAS domain 16 92 4.7E-15 T 17-10-2018 IPR002645 STAS domain FORC55_3213 2ddfb90f1f203d3be651867ee09a5ffd 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 75 6.7E-34 T 17-10-2018 IPR021811 Protein of unknown function DUF3389 FORC55_2331 beb347a1f018dc14df3afee88db687a8 143 Gene3D G3DSA:2.60.40.3340 14 143 8.5E-40 T 17-10-2018 FORC55_2331 beb347a1f018dc14df3afee88db687a8 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 1.4E-47 T 17-10-2018 IPR025218 Domain of unknown function DUF4426 FORC55_3629 dfa96171b2678aeae31bf9dff2276bf9 301 SUPERFAMILY SSF103481 46 139 6.15E-14 T 17-10-2018 FORC55_3629 dfa96171b2678aeae31bf9dff2276bf9 301 Pfam PF00892 EamA-like transporter family 147 281 2.2E-21 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3629 dfa96171b2678aeae31bf9dff2276bf9 301 Pfam PF00892 EamA-like transporter family 9 136 1.3E-15 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 FORC55_3629 dfa96171b2678aeae31bf9dff2276bf9 301 SUPERFAMILY SSF103481 182 284 1.24E-13 T 17-10-2018 FORC55_0839 3849b4a6f08b541b5b767aa642735994 272 SUPERFAMILY SSF53335 5 254 1.07E-45 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0839 3849b4a6f08b541b5b767aa642735994 272 PIRSF PIRSF018249 1 272 3.6E-84 T 17-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 FORC55_0839 3849b4a6f08b541b5b767aa642735994 272 Gene3D G3DSA:3.40.50.150 1 272 2.0E-78 T 17-10-2018 FORC55_0839 3849b4a6f08b541b5b767aa642735994 272 Pfam PF13847 Methyltransferase domain 88 197 6.5E-12 T 17-10-2018 IPR025714 Methyltransferase domain FORC55_1630 bf1ca40228558c7f6b612a653798cdbc 306 SUPERFAMILY SSF109604 32 301 1.54E-39 T 17-10-2018 FORC55_1630 bf1ca40228558c7f6b612a653798cdbc 306 Gene3D G3DSA:1.10.3210.10 21 297 2.2E-36 T 17-10-2018 FORC55_1630 bf1ca40228558c7f6b612a653798cdbc 306 Pfam PF08668 HDOD domain 39 233 2.4E-36 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD FORC55_3433 aaeade33442c56edd461256e09ae3a6c 309 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 3.1E-92 T 17-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 FORC55_3433 aaeade33442c56edd461256e09ae3a6c 309 Pfam PF00491 Arginase family 33 297 1.7E-88 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 FORC55_3433 aaeade33442c56edd461256e09ae3a6c 309 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 17-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 FORC55_3433 aaeade33442c56edd461256e09ae3a6c 309 PIRSF PIRSF036979 11 305 1.4E-96 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 FORC55_3433 aaeade33442c56edd461256e09ae3a6c 309 Gene3D G3DSA:3.40.800.10 1 309 5.7E-105 T 17-10-2018 FORC55_3433 aaeade33442c56edd461256e09ae3a6c 309 SUPERFAMILY SSF52768 12 303 8.46E-95 T 17-10-2018 IPR023696 Ureohydrolase domain superfamily FORC55_1546 62ebc3952d74af77e0eae564994e684c 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 6.6E-9 T 17-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 FORC55_0150 9e39a85541f212bb55a10d9d45d15872 125 PIRSF PIRSF016821 5 125 3.6E-42 T 17-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 FORC55_0150 9e39a85541f212bb55a10d9d45d15872 125 SUPERFAMILY SSF55174 6 104 1.28E-32 T 17-10-2018 FORC55_0150 9e39a85541f212bb55a10d9d45d15872 125 SMART SM00363 8 71 1.6E-11 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_0150 9e39a85541f212bb55a10d9d45d15872 125 Gene3D G3DSA:3.10.290.10 2 106 2.7E-38 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 FORC55_0150 9e39a85541f212bb55a10d9d45d15872 125 Pfam PF01479 S4 domain 8 54 7.5E-14 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 FORC55_1298 954b965b2d7054c88370d0cdb435ddef 176 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 171 21.86 T 17-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 FORC55_1298 954b965b2d7054c88370d0cdb435ddef 176 Pfam PF12804 MobA-like NTP transferase domain 1 139 2.8E-28 T 17-10-2018 IPR025877 MobA-like NTP transferase FORC55_1298 954b965b2d7054c88370d0cdb435ddef 176 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 1 169 2.1E-63 T 17-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 FORC55_1298 954b965b2d7054c88370d0cdb435ddef 176 Gene3D G3DSA:3.90.550.10 1 173 5.8E-50 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_1298 954b965b2d7054c88370d0cdb435ddef 176 SUPERFAMILY SSF53448 2 168 9.97E-29 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases FORC55_1393 3dfc138aaa465d072d10c36d2659b44a 272 Pfam PF13503 Domain of unknown function (DUF4123) 14 125 6.9E-18 T 17-10-2018 IPR025391 Domain of unknown function DUF4123 FORC55_2257 805c55af35823eab7be3067733dae812 264 Pfam PF01578 Cytochrome C assembly protein 37 262 2.0E-46 T 17-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 FORC55_2704 931d9ecf96e5eb22f7c8cb4f74a8419c 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.0E-34 T 17-10-2018 IPR008514 Type VI secretion system effector, Hcp FORC55_2704 931d9ecf96e5eb22f7c8cb4f74a8419c 172 SUPERFAMILY SSF141452 3 168 1.44E-40 T 17-10-2018 IPR036624 Hcp1-like superfamily FORC55_2704 931d9ecf96e5eb22f7c8cb4f74a8419c 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 7.4E-65 T 17-10-2018 IPR008514 Type VI secretion system effector, Hcp FORC55_2704 931d9ecf96e5eb22f7c8cb4f74a8419c 172 Gene3D G3DSA:2.30.110.20 2 172 7.4E-69 T 17-10-2018 IPR036624 Hcp1-like superfamily FORC55_0094 a54fbd7abbb3cc23be8a356168811175 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 1.0E-46 T 17-10-2018 IPR019617 Domain of unknown function DUF2489 FORC55_1946 55b1a845a83a87eb6bd33f073b49d355 313 Gene3D G3DSA:1.10.4200.10 58 307 1.7E-11 T 17-10-2018 FORC55_1946 55b1a845a83a87eb6bd33f073b49d355 313 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 32 304 2.1E-116 T 17-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 FORC55_1946 55b1a845a83a87eb6bd33f073b49d355 313 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 313 171.98 T 17-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 FORC55_1946 55b1a845a83a87eb6bd33f073b49d355 313 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 34 302 6.1E-85 T 17-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 FORC55_2139 4d7c602ba3b89839ef989f245908dd97 1191 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 1073 1148 3.2E-27 T 17-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN FORC55_2139 4d7c602ba3b89839ef989f245908dd97 1191 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 783 918 8.8E-16 T 17-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN FORC55_3605 29d6491d22dcd05c69f9f049be458672 278 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 198 3.5E-44 T 17-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 FORC55_0754 c9c9287dce532304f1884c9f92bc122c 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 4.4E-65 T 17-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 FORC55_0754 c9c9287dce532304f1884c9f92bc122c 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 238 1.2E-58 T 17-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 FORC55_0754 c9c9287dce532304f1884c9f92bc122c 252 Gene3D G3DSA:3.40.1390.30 97 223 1.4E-81 T 17-10-2018 FORC55_0754 c9c9287dce532304f1884c9f92bc122c 252 Gene3D G3DSA:3.40.1390.30 14 237 1.4E-81 T 17-10-2018 FORC55_0754 c9c9287dce532304f1884c9f92bc122c 252 SUPERFAMILY SSF102705 1 251 1.05E-82 T 17-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily FORC55_2925 3a5d9e51b3a630df994665e65c7bbd50 1132 SUPERFAMILY SSF53335 77 604 5.95E-43 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0749 885c794724e5258048d82609b11317eb 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 3.6E-19 T 17-10-2018 IPR021249 Protein of unknown function DUF2788 FORC55_1660 81ba6b46f83d823d88e684be82084ce8 178 Pfam PF16036 Chalcone isomerase-like 34 174 1.2E-9 T 17-10-2018 IPR016087 Chalcone isomerase GO:0016872 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 Gene3D G3DSA:3.30.540.10 1 140 2.5E-51 T 17-10-2018 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 17-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 Gene3D G3DSA:3.40.190.80 144 266 1.3E-37 T 17-10-2018 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 17-10-2018 IPR020583 Inositol monophosphatase, metal-binding site FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 SUPERFAMILY SSF56655 1 259 2.49E-84 T 17-10-2018 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.6E-32 T 17-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.6E-32 T 17-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.6E-32 T 17-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.6E-32 T 17-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.1E-58 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.1E-58 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.1E-58 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.1E-58 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.1E-58 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.1E-58 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_1998 5ba775791c4a040a9678628dc60047a4 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.6E-70 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 FORC55_2823 1b61d2f27929d1743b43a0c703d5b5f5 713 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 698 7.6E-229 T 17-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ FORC55_2823 1b61d2f27929d1743b43a0c703d5b5f5 713 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 122 616 4.1E-71 T 17-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit FORC55_1286 a7cd908ad8302ffff9135d52db2eb8b1 327 Pfam PF11279 Protein of unknown function (DUF3080) 26 323 3.4E-89 T 17-10-2018 IPR021431 Protein of unknown function DUF3080 FORC55_0806 f0fe04a189f85c618b92211857a72258 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 5.6E-99 T 17-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 FORC55_0806 f0fe04a189f85c618b92211857a72258 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.356 T 17-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 FORC55_2390 ac7ceb13572954b1b1070a5e5ea8ca42 479 PIRSF PIRSF028153 1 479 1.3E-230 T 17-10-2018 IPR016871 MSHA biogenesis protein, MshI FORC55_2390 ac7ceb13572954b1b1070a5e5ea8ca42 479 SUPERFAMILY SSF53067 40 154 2.59E-15 T 17-10-2018 FORC55_1681 33fbbb4cd5aa72e98ae980ad1d8c7423 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 2.3E-27 T 17-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 FORC55_3545 6c584e2ee7fa9ec02fbadfb0de70cb3a 477 Pfam PF12268 Protein of unknown function (DUF3612) 299 473 6.2E-102 T 17-10-2018 IPR022055 Protein of unknown function DUF3612 FORC55_3545 6c584e2ee7fa9ec02fbadfb0de70cb3a 477 SUPERFAMILY SSF47413 18 58 2.37E-7 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_3545 6c584e2ee7fa9ec02fbadfb0de70cb3a 477 Gene3D G3DSA:1.10.260.40 1 66 6.8E-7 T 17-10-2018 FORC55_3545 6c584e2ee7fa9ec02fbadfb0de70cb3a 477 Pfam PF01381 Helix-turn-helix 18 51 1.6E-6 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 FORC55_1738 c8ab9dcff7495616f557495f87775f76 419 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 419 6.8E-125 T 17-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC55_1738 c8ab9dcff7495616f557495f87775f76 419 SUPERFAMILY SSF56935 26 419 4.07E-89 T 17-10-2018 FORC55_1738 c8ab9dcff7495616f557495f87775f76 419 Gene3D G3DSA:2.40.160.60 26 419 7.2E-111 T 17-10-2018 FORC55_0797 80e8fe721a0fe7a68068a29eaec2373a 248 Pfam PF04333 MlaA lipoprotein 31 223 3.8E-64 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 FORC55_0797 80e8fe721a0fe7a68068a29eaec2373a 248 PRINTS PR01805 VacJ lipoprotein signature 51 67 8.0E-29 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 FORC55_0797 80e8fe721a0fe7a68068a29eaec2373a 248 PRINTS PR01805 VacJ lipoprotein signature 102 119 8.0E-29 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 FORC55_0797 80e8fe721a0fe7a68068a29eaec2373a 248 PRINTS PR01805 VacJ lipoprotein signature 139 156 8.0E-29 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 FORC55_0797 80e8fe721a0fe7a68068a29eaec2373a 248 PRINTS PR01805 VacJ lipoprotein signature 33 46 8.0E-29 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 FORC55_2535 af00e95e1e9f0cbe0bfa2bfcff81412f 366 Gene3D G3DSA:3.40.50.11190 1 173 2.3E-46 T 17-10-2018 FORC55_2535 af00e95e1e9f0cbe0bfa2bfcff81412f 366 Gene3D G3DSA:3.40.50.2000 174 320 2.4E-36 T 17-10-2018 FORC55_2535 af00e95e1e9f0cbe0bfa2bfcff81412f 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 212 327 2.9E-6 T 17-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 FORC55_2535 af00e95e1e9f0cbe0bfa2bfcff81412f 366 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 2 305 4.1E-97 T 17-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase FORC55_2535 af00e95e1e9f0cbe0bfa2bfcff81412f 366 SUPERFAMILY SSF53756 16 322 3.43E-12 T 17-10-2018 FORC55_2585 22f10988faee0d2d2d89ae34fd67ca3e 346 Pfam PF01661 Macro domain 18 130 6.3E-22 T 17-10-2018 IPR002589 Macro domain FORC55_2585 22f10988faee0d2d2d89ae34fd67ca3e 346 SUPERFAMILY SSF52949 1 149 1.3E-43 T 17-10-2018 FORC55_2585 22f10988faee0d2d2d89ae34fd67ca3e 346 Gene3D G3DSA:3.40.220.10 1 148 6.9E-41 T 17-10-2018 FORC55_2585 22f10988faee0d2d2d89ae34fd67ca3e 346 SMART SM00506 1 132 5.2E-25 T 17-10-2018 IPR002589 Macro domain FORC55_3149 0dba374b9599b8ea87bd8ee6d215e36a 957 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 379 646 1.2E-11 T 17-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 FORC55_3149 0dba374b9599b8ea87bd8ee6d215e36a 957 SUPERFAMILY SSF53649 380 654 1.86E-8 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 FORC55_1142 cbed07f3d790234637aba9992d5e1ca2 94 Pfam PF06146 Phosphate-starvation-inducible E 25 85 5.2E-12 T 17-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like FORC55_1142 cbed07f3d790234637aba9992d5e1ca2 94 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 18 94 3.5E-39 T 17-10-2018 IPR013468 Conserved hypothetical protein CHP02647 FORC55_0488 7aa5c9767baa653611e43c54cbc61719 117 Pfam PF16068 Domain of unknown function (DUF4810) 28 112 2.2E-23 T 17-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats FORC55_3652 8fa97902a0427185d89ab570099aff29 368 Pfam PF08308 PEGA domain 299 363 2.3E-25 T 17-10-2018 IPR013229 PEGA FORC55_3652 8fa97902a0427185d89ab570099aff29 368 Gene3D G3DSA:2.60.40.1120 293 365 2.9E-5 T 17-10-2018 FORC55_1623 095b9a37742ad15691945165b992dded 329 SUPERFAMILY SSF56059 51 285 9.0E-20 T 17-10-2018 FORC55_1623 095b9a37742ad15691945165b992dded 329 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 10 323 4.6E-167 T 17-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein FORC55_1623 095b9a37742ad15691945165b992dded 329 Pfam PF14397 Sugar-transfer associated ATP-grasp 27 299 1.6E-114 T 17-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 FORC55_2088 f0cf4a027a863c79a319e8a03c8e4538 79 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 57 1.4E-7 T 17-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 FORC55_2088 f0cf4a027a863c79a319e8a03c8e4538 79 SUPERFAMILY SSF46785 5 69 4.12E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_2088 f0cf4a027a863c79a319e8a03c8e4538 79 Gene3D G3DSA:1.10.10.10 4 68 1.5E-15 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily FORC55_1602 315df5c5e0ac0301e2132bda734d0940 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 5.7E-53 T 17-10-2018 IPR018724 2OG-Fe dioxygenase FORC55_1602 315df5c5e0ac0301e2132bda734d0940 218 Gene3D G3DSA:2.60.120.620 1 215 6.0E-51 T 17-10-2018 FORC55_3215 1be3ee59fa620f8235ac582eb92fc1ea 263 Pfam PF01435 Peptidase family M48 60 246 1.2E-46 T 17-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 FORC55_3215 1be3ee59fa620f8235ac582eb92fc1ea 263 Gene3D G3DSA:3.30.2010.10 51 140 4.3E-8 T 17-10-2018 FORC55_1837 b559d48f04594bfcce18c1d69dac1448 398 Pfam PF10082 Putative beta-barrel porin 2 42 395 4.9E-30 T 17-10-2018 IPR018759 Putative beta-barrel porin 2 FORC55_2709 04b50dedca5c0dade06feb079f2d33de 133 Gene3D G3DSA:1.20.120.550 1 128 6.7E-27 T 17-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily FORC55_2709 04b50dedca5c0dade06feb079f2d33de 133 Pfam PF01124 MAPEG family 4 120 1.7E-25 T 17-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein FORC55_2709 04b50dedca5c0dade06feb079f2d33de 133 SUPERFAMILY SSF161084 2 126 2.22E-30 T 17-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily FORC55_1257 3f42db55b1ccf2ce7b872cfc3552b871 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 111 4.5E-47 T 17-10-2018 IPR007437 Protein of unknown function DUF486 FORC55_1257 3f42db55b1ccf2ce7b872cfc3552b871 116 PIRSF PIRSF021239 1 114 1.6E-57 T 17-10-2018 IPR007437 Protein of unknown function DUF486 FORC55_1904 8bc9c2e2795929a8c526d9c612905f17 196 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 6.5E-5 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1904 8bc9c2e2795929a8c526d9c612905f17 196 PIRSF PIRSF004525 3 196 1.0E-15 T 17-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted FORC55_2512 c5ba9a6bf69e7479480fb10eb66fe7c6 307 SUPERFAMILY SSF52283 14 105 3.57E-7 T 17-10-2018 FORC55_2512 c5ba9a6bf69e7479480fb10eb66fe7c6 307 Gene3D G3DSA:3.40.50.720 33 299 2.0E-93 T 17-10-2018 FORC55_2512 c5ba9a6bf69e7479480fb10eb66fe7c6 307 Gene3D G3DSA:3.40.50.720 91 276 2.0E-93 T 17-10-2018 FORC55_2512 c5ba9a6bf69e7479480fb10eb66fe7c6 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 1.3E-41 T 17-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 FORC55_2512 c5ba9a6bf69e7479480fb10eb66fe7c6 307 SUPERFAMILY SSF51735 91 273 1.04E-42 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_2130 466c8b367876a22e96d52d89e6aaf379 170 SUPERFAMILY SSF52821 5 58 8.77E-5 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_2130 466c8b367876a22e96d52d89e6aaf379 170 Gene3D G3DSA:3.40.250.10 61 168 9.0E-20 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_2130 466c8b367876a22e96d52d89e6aaf379 170 SUPERFAMILY SSF52821 45 159 9.3E-25 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily FORC55_2130 466c8b367876a22e96d52d89e6aaf379 170 Pfam PF00581 Rhodanese-like domain 68 157 2.8E-11 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_2130 466c8b367876a22e96d52d89e6aaf379 170 SMART SM00450 65 162 3.9E-13 T 17-10-2018 IPR001763 Rhodanese-like domain FORC55_0354 acc4814d6172859d9db4c7f44240d06d 164 Pfam PF03968 OstA-like protein 30 141 3.3E-28 T 17-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal FORC55_0354 acc4814d6172859d9db4c7f44240d06d 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.024 T 17-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 FORC55_0354 acc4814d6172859d9db4c7f44240d06d 164 Gene3D G3DSA:2.60.450.10 20 157 2.2E-38 T 17-10-2018 FORC55_0354 acc4814d6172859d9db4c7f44240d06d 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 2.3E-46 T 17-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 FORC55_0075 12ceb8ec2bc36e8023fb25e485268a2d 333 Gene3D G3DSA:1.10.760.10 42 189 5.5E-111 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0075 12ceb8ec2bc36e8023fb25e485268a2d 333 Pfam PF00034 Cytochrome c 198 307 2.1E-8 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_0075 12ceb8ec2bc36e8023fb25e485268a2d 333 Gene3D G3DSA:1.10.760.10 190 313 5.5E-111 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0075 12ceb8ec2bc36e8023fb25e485268a2d 333 SUPERFAMILY SSF46626 176 326 1.66E-40 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0075 12ceb8ec2bc36e8023fb25e485268a2d 333 PIRSF PIRSF000294 8 331 5.4E-128 T 17-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 FORC55_0075 12ceb8ec2bc36e8023fb25e485268a2d 333 SUPERFAMILY SSF46626 20 177 1.14E-47 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0075 12ceb8ec2bc36e8023fb25e485268a2d 333 Pfam PF03150 Di-haem cytochrome c peroxidase 43 189 1.1E-48 T 17-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 FORC55_2084 02c3596b5774a1f7447a18b3b6551583 502 Pfam PF11867 Domain of unknown function (DUF3387) 158 498 1.5E-113 T 17-10-2018 IPR021810 Protein of unknown function DUF3387 FORC55_2084 02c3596b5774a1f7447a18b3b6551583 502 Gene3D G3DSA:3.40.50.300 14 164 4.8E-37 T 17-10-2018 FORC55_3397 4e850675cf1ac6d75db455b308fb5622 102 Pfam PF00034 Cytochrome c 32 100 3.5E-8 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 FORC55_3397 4e850675cf1ac6d75db455b308fb5622 102 Gene3D G3DSA:1.10.760.10 20 102 5.9E-23 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_3397 4e850675cf1ac6d75db455b308fb5622 102 SUPERFAMILY SSF46626 31 101 1.37E-19 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0465 f8b6a87fc61165d5579bf12d0f9d89eb 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.316 T 17-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 FORC55_0465 f8b6a87fc61165d5579bf12d0f9d89eb 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 104 6.8E-30 T 17-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 FORC55_0465 f8b6a87fc61165d5579bf12d0f9d89eb 106 Pfam PF04999 Cell division protein FtsL 9 104 1.9E-35 T 17-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 FORC55_0384 1eab2d6e487aaa04aa07d9ee4ec1f2a4 263 Pfam PF04784 Protein of unknown function, DUF547 86 198 1.5E-25 T 17-10-2018 IPR006869 Domain of unknown function DUF547 FORC55_3608 b810712bbab1cbcfb7a3b7b7208f7da2 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 2.3E-42 T 17-10-2018 IPR021376 Protein of unknown function DUF2999 FORC55_0143 a3a1146059167930704b519997358b32 176 Pfam PF13521 AAA domain 4 164 3.8E-34 T 17-10-2018 IPR038727 NadR/Ttd14, AAA domain FORC55_0143 a3a1146059167930704b519997358b32 176 Gene3D G3DSA:3.40.50.300 2 167 1.1E-6 T 17-10-2018 FORC55_0143 a3a1146059167930704b519997358b32 176 SUPERFAMILY SSF52540 3 170 3.45E-15 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1071 9f3979940ce6f94eabe6692b710ecffe 218 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 16 208 3.4E-37 T 17-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 FORC55_1071 9f3979940ce6f94eabe6692b710ecffe 218 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 14 186 1.0E-34 T 17-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 FORC55_1965 b035adbb3524042dad583b560c5baba4 358 Gene3D G3DSA:1.10.3470.10 31 358 6.7E-81 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_1965 b035adbb3524042dad583b560c5baba4 358 Pfam PF01032 FecCD transport family 45 353 4.1E-72 T 17-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 FORC55_1965 b035adbb3524042dad583b560c5baba4 358 SUPERFAMILY SSF81345 26 353 7.98E-65 T 17-10-2018 IPR037294 ABC transporter, BtuC-like FORC55_1244 291aff10d3a381a75558b8fda8605edc 284 SUPERFAMILY SSF141868 9 252 2.22E-63 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_1244 291aff10d3a381a75558b8fda8605edc 284 Pfam PF00563 EAL domain 9 240 1.5E-55 T 17-10-2018 IPR001633 EAL domain FORC55_1244 291aff10d3a381a75558b8fda8605edc 284 Gene3D G3DSA:3.20.20.450 4 246 7.8E-66 T 17-10-2018 IPR035919 EAL domain superfamily FORC55_1244 291aff10d3a381a75558b8fda8605edc 284 SMART SM00052 3 245 9.3E-29 T 17-10-2018 IPR001633 EAL domain FORC55_2514 fdc606eca058d8143a3e24016b7886e6 412 Pfam PF00924 Mechanosensitive ion channel 143 397 1.9E-52 T 17-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 FORC55_2514 fdc606eca058d8143a3e24016b7886e6 412 SUPERFAMILY SSF50182 187 252 1.18E-10 T 17-10-2018 IPR010920 LSM domain superfamily FORC55_2514 fdc606eca058d8143a3e24016b7886e6 412 SUPERFAMILY SSF82689 326 394 6.28E-5 T 17-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 FORC55_2428 9fa693490b8ed2d366f9d5d128023670 131 SUPERFAMILY SSF75169 6 131 4.91E-35 T 17-10-2018 IPR027396 DsrEFH-like FORC55_2428 9fa693490b8ed2d366f9d5d128023670 131 Pfam PF02635 DsrE/DsrF-like family 6 131 2.8E-26 T 17-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein FORC55_2428 9fa693490b8ed2d366f9d5d128023670 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 1.5E-53 T 17-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 FORC55_2428 9fa693490b8ed2d366f9d5d128023670 131 Gene3D G3DSA:3.40.1260.10 1 131 1.8E-52 T 17-10-2018 IPR027396 DsrEFH-like FORC55_3090 025559e7b85ed1448d34e61221a54788 104 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 28 101 7.9E-8 T 17-10-2018 IPR032758 Antitoxin MqsA/HigA-2 FORC55_3090 025559e7b85ed1448d34e61221a54788 104 Gene3D G3DSA:1.10.260.40 4 101 1.6E-17 T 17-10-2018 FORC55_3090 025559e7b85ed1448d34e61221a54788 104 SUPERFAMILY SSF47413 43 90 1.53E-8 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_0998 7e32598b38f75cbb883b50ce62377879 146 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.073 T 17-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 FORC55_0998 7e32598b38f75cbb883b50ce62377879 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 145 8.5E-26 T 17-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 FORC55_0998 7e32598b38f75cbb883b50ce62377879 146 Gene3D G3DSA:3.30.420.270 63 136 3.4E-18 T 17-10-2018 FORC55_1832 3592e023265d6665dd163d9357d16cde 198 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 1.9E-32 T 17-10-2018 IPR003740 Uncharacterised membrane protein YitT FORC55_0573 e27d9870847184255db03d86e44396ec 334 SUPERFAMILY SSF143631 23 332 2.22E-104 T 17-10-2018 IPR003374 ApbE-like superfamily FORC55_0573 e27d9870847184255db03d86e44396ec 334 Pfam PF02424 ApbE family 31 309 1.6E-86 T 17-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 FORC55_0573 e27d9870847184255db03d86e44396ec 334 Gene3D G3DSA:3.10.520.20 15 334 8.7E-115 T 17-10-2018 FORC55_0573 e27d9870847184255db03d86e44396ec 334 PIRSF PIRSF006268 1 333 1.3E-96 T 17-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 FORC55_1488 163a8ccde836c48168091147b918c01d 457 PIRSF PIRSF019381 1 457 2.2E-196 T 17-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein FORC55_1488 163a8ccde836c48168091147b918c01d 457 Pfam PF04317 YcjX-like family, DUF463 20 456 2.6E-184 T 17-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein FORC55_2935 8f5611e199dead1ffb1b99054fa8a8f9 578 SMART SM00487 15 193 0.0078 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain FORC55_2935 8f5611e199dead1ffb1b99054fa8a8f9 578 SUPERFAMILY SSF52540 19 170 1.92E-10 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2935 8f5611e199dead1ffb1b99054fa8a8f9 578 Gene3D G3DSA:3.40.50.300 12 187 5.4E-9 T 17-10-2018 FORC55_2128 a6dbe50b1ceb0b9de1cc201fe3cdf093 229 SUPERFAMILY SSF52317 3 226 2.75E-38 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_2128 a6dbe50b1ceb0b9de1cc201fe3cdf093 229 Gene3D G3DSA:3.40.50.880 2 229 2.9E-53 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like FORC55_2128 a6dbe50b1ceb0b9de1cc201fe3cdf093 229 Pfam PF07722 Peptidase C26 46 205 2.5E-46 T 17-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 FORC55_1866 e6b3bbb6fd725c8e13d2d5a182ecfd60 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 9.8E-113 T 17-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 FORC55_1866 e6b3bbb6fd725c8e13d2d5a182ecfd60 258 PIRSF PIRSF029037 1 258 5.1E-115 T 17-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 FORC55_3529 4799b3ec9acb58c3871e7ecebe395f3d 162 Pfam PF03061 Thioesterase superfamily 22 95 6.0E-17 T 17-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 FORC55_3529 4799b3ec9acb58c3871e7ecebe395f3d 162 Gene3D G3DSA:3.10.129.10 2 160 1.4E-42 T 17-10-2018 FORC55_3529 4799b3ec9acb58c3871e7ecebe395f3d 162 SUPERFAMILY SSF54637 5 150 2.09E-40 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_1979 79434c68b331dcc1baa7c2eab0aa1ed1 294 SUPERFAMILY SSF55186 122 273 2.62E-11 T 17-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 300 457 4.9E-33 T 17-10-2018 IPR000160 GGDEF domain FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 SMART SM00062 32 254 6.5E-19 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 251 2.0E-30 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 Gene3D G3DSA:3.30.70.270 287 459 1.4E-44 T 17-10-2018 FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 Gene3D G3DSA:3.40.190.10 117 213 9.5E-38 T 17-10-2018 FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 454 1.4E-33 T 17-10-2018 IPR000160 GGDEF domain FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 SMART SM00267 291 458 2.5E-46 T 17-10-2018 IPR000160 GGDEF domain FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 SUPERFAMILY SSF55073 307 457 2.04E-36 T 17-10-2018 IPR029787 Nucleotide cyclase FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 SUPERFAMILY SSF53850 33 252 1.85E-38 T 17-10-2018 FORC55_3191 21a16132e622bf2e6cdf364e00958c74 461 Gene3D G3DSA:3.40.190.10 30 250 9.5E-38 T 17-10-2018 FORC55_2592 c017d83fd22520768c596e8659e5ec98 580 Pfam PF06048 Domain of unknown function (DUF927) 28 310 4.3E-98 T 17-10-2018 IPR009270 Domain of unknown function DUF927 FORC55_2813 396542824f463c59585a16eb1eb11ce6 404 SUPERFAMILY SSF103473 8 389 1.57E-38 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_2813 396542824f463c59585a16eb1eb11ce6 404 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 20 382 1.7E-56 T 17-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB FORC55_2813 396542824f463c59585a16eb1eb11ce6 404 Gene3D G3DSA:1.20.1250.20 202 400 5.7E-20 T 17-10-2018 FORC55_2813 396542824f463c59585a16eb1eb11ce6 404 Gene3D G3DSA:1.20.1250.20 7 187 2.3E-12 T 17-10-2018 FORC55_3225 7d5ef1451d4e1c561aa0e2eadc8bfd4c 360 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 148 355 2.1E-35 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3225 7d5ef1451d4e1c561aa0e2eadc8bfd4c 360 Gene3D G3DSA:1.10.3720.10 119 349 1.3E-19 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3225 7d5ef1451d4e1c561aa0e2eadc8bfd4c 360 SUPERFAMILY SSF161098 124 341 3.4E-15 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1188 7f57f195adbaad90ca7b802ee67b5856 587 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 4.9E-32 T 17-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain FORC55_1188 7f57f195adbaad90ca7b802ee67b5856 587 SUPERFAMILY SSF53850 116 585 5.07E-61 T 17-10-2018 FORC55_1188 7f57f195adbaad90ca7b802ee67b5856 587 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 373 7.5E-21 T 17-10-2018 IPR000914 Solute-binding protein family 5 domain FORC55_1188 7f57f195adbaad90ca7b802ee67b5856 587 Gene3D G3DSA:3.40.190.10 120 372 5.1E-29 T 17-10-2018 FORC55_2083 c5bc4e453d234a2e294430fa98278ec8 177 Pfam PF05280 Flagellar transcriptional activator (FlhC) 10 167 6.0E-18 T 17-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 FORC55_2083 c5bc4e453d234a2e294430fa98278ec8 177 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 5 163 5.0E-10 T 17-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 FORC55_2083 c5bc4e453d234a2e294430fa98278ec8 177 SUPERFAMILY SSF160930 5 163 1.01E-34 T 17-10-2018 FORC55_3600 ed2f723c1d9c7a5ae9b9380c85fe7e31 76 Pfam PF04219 Protein of unknown function, DUF 1 57 2.8E-16 T 17-10-2018 IPR007335 Protein of unknown function DUF413 FORC55_0253 e37d4b71bf5ad5fbcccbc825abd5f264 172 Pfam PF04351 Pilus assembly protein, PilP 25 171 1.4E-43 T 17-10-2018 IPR007446 Pilus assembly protein PilP FORC55_0253 e37d4b71bf5ad5fbcccbc825abd5f264 172 Gene3D G3DSA:2.30.30.830 79 172 9.0E-24 T 17-10-2018 FORC55_0253 e37d4b71bf5ad5fbcccbc825abd5f264 172 PIRSF PIRSF016481 1 172 9.2E-74 T 17-10-2018 IPR007446 Pilus assembly protein PilP FORC55_1557 4271432ed9c72eedac07e9169cd379cc 113 Pfam PF03788 LrgA family 9 100 3.3E-23 T 17-10-2018 IPR005538 LrgA/CidA family GO:0016021 FORC55_3326 0a0f1da3f2039528729876178b776431 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 505 682 1.7E-12 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3326 0a0f1da3f2039528729876178b776431 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 404 8.5E-16 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_3326 0a0f1da3f2039528729876178b776431 698 SUPERFAMILY SSF161098 150 410 5.1E-41 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3326 0a0f1da3f2039528729876178b776431 698 Gene3D G3DSA:1.10.3720.10 144 415 9.4E-51 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3326 0a0f1da3f2039528729876178b776431 698 Gene3D G3DSA:1.10.3720.10 433 693 1.9E-45 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3326 0a0f1da3f2039528729876178b776431 698 SUPERFAMILY SSF161098 440 679 3.71E-44 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_3421 8564507e71f2d7d5f50ec5cf15822d07 160 Pfam PF05981 CreA protein 25 147 4.8E-45 T 17-10-2018 IPR010292 Uncharacterised protein family CreA FORC55_3421 8564507e71f2d7d5f50ec5cf15822d07 160 PIRSF PIRSF003174 2 157 2.1E-50 T 17-10-2018 IPR010292 Uncharacterised protein family CreA FORC55_2740 b5a45aa35d436e5fed8d8dd5253e965a 306 Gene3D G3DSA:2.40.440.10 18 297 2.1E-83 T 17-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like FORC55_2740 b5a45aa35d436e5fed8d8dd5253e965a 306 SUPERFAMILY SSF141523 95 229 7.98E-29 T 17-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like FORC55_2740 b5a45aa35d436e5fed8d8dd5253e965a 306 SUPERFAMILY SSF54106 37 82 2.62E-7 T 17-10-2018 FORC55_2740 b5a45aa35d436e5fed8d8dd5253e965a 306 Pfam PF03734 L,D-transpeptidase catalytic domain 95 229 7.5E-22 T 17-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 FORC55_2740 b5a45aa35d436e5fed8d8dd5253e965a 306 Pfam PF01476 LysM domain 39 82 1.4E-9 T 17-10-2018 IPR018392 LysM domain FORC55_2740 b5a45aa35d436e5fed8d8dd5253e965a 306 SMART SM00257 38 82 3.0E-8 T 17-10-2018 IPR018392 LysM domain FORC55_0720 77369c0da25a8f2484fd3dae6f5d1c84 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 1.4E-34 T 17-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE FORC55_0720 77369c0da25a8f2484fd3dae6f5d1c84 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 1.8E-7 T 17-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 FORC55_0720 77369c0da25a8f2484fd3dae6f5d1c84 266 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 1.8E-7 T 17-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 FORC55_0720 77369c0da25a8f2484fd3dae6f5d1c84 266 PRINTS PR01003 Flagellar assembly protein FliH signature 108 126 1.8E-7 T 17-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 FORC55_0720 77369c0da25a8f2484fd3dae6f5d1c84 266 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 1.8E-7 T 17-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 FORC55_3494 ee109b00a4048f818b97d987b710e157 278 PIRSF PIRSF028200 1 278 7.6E-97 T 17-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 FORC55_2804 3d2a1f0d7c92c1ee71dea6934a8d0b34 89 Gene3D G3DSA:1.10.8.1160 1 89 3.8E-48 T 17-10-2018 FORC55_1642 4163769d119786929ed68ffc52dff5b4 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 1.0E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_1642 4163769d119786929ed68ffc52dff5b4 440 SUPERFAMILY SSF53098 103 419 5.46E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1642 4163769d119786929ed68ffc52dff5b4 440 Pfam PF01609 Transposase DDE domain 129 350 8.5E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_3426 4a240e44ceb70373a295e9ae1fbd5015 117 Pfam PF11225 Protein of unknown function (DUF3024) 57 116 1.4E-18 T 17-10-2018 IPR021388 Bacteriophage 933W, L0084 FORC55_1936 0719cb515c3670c6a76e93e239e0c74f 750 Gene3D G3DSA:1.25.40.20 451 609 2.9E-12 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily FORC55_1936 0719cb515c3670c6a76e93e239e0c74f 750 Gene3D G3DSA:1.25.40.960 655 713 3.3E-8 T 17-10-2018 FORC55_1936 0719cb515c3670c6a76e93e239e0c74f 750 SUPERFAMILY SSF48403 460 717 2.3E-18 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily FORC55_1936 0719cb515c3670c6a76e93e239e0c74f 750 SMART SM00248 457 486 480.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 FORC55_1936 0719cb515c3670c6a76e93e239e0c74f 750 SMART SM00248 537 566 1.5 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 FORC55_1936 0719cb515c3670c6a76e93e239e0c74f 750 SMART SM00248 648 677 180.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 FORC55_1936 0719cb515c3670c6a76e93e239e0c74f 750 SMART SM00248 684 714 30.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 FORC55_0724 40e5a0eeb0bacdb4e10cc50b4ebf7e8a 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 3.1E-20 T 17-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 FORC55_2406 aec3f62f654d9fcf6f54d8db3811e879 221 Pfam PF13505 Outer membrane protein beta-barrel domain 7 221 8.6E-11 T 17-10-2018 IPR027385 Outer membrane protein beta-barrel FORC55_2406 aec3f62f654d9fcf6f54d8db3811e879 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 10 221 1.3E-51 T 17-10-2018 IPR026387 Outer membrane protein FORC55_1883 7fc21bbdd465d1f18a0cc12f309792dd 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 2.3E-132 T 17-10-2018 IPR021936 Protein of unknown function DUF3549 FORC55_3466 d421411867dfd0f6fe3b6b1ac7bc1cf7 85 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 83 1.3E-39 T 17-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain FORC55_1465 6276360a2b6752214241a2ef8323d072 509 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 7.3E-141 T 17-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane FORC55_2599 84231661d080ddf094183b651dbce59a 96 Pfam PF13560 Helix-turn-helix domain 16 82 8.8E-8 T 17-10-2018 FORC55_2599 84231661d080ddf094183b651dbce59a 96 SUPERFAMILY SSF47413 16 66 1.89E-6 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 FORC55_2599 84231661d080ddf094183b651dbce59a 96 Gene3D G3DSA:1.10.260.40 6 79 4.5E-7 T 17-10-2018 FORC55_1293 d9e507676372baa0aac4740601427046 263 Pfam PF04116 Fatty acid hydroxylase superfamily 89 225 7.8E-26 T 17-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 FORC55_0496 98cf5a636f2317f835687ab7edf181b5 121 Pfam PF07386 Protein of unknown function (DUF1499) 7 112 2.6E-23 T 17-10-2018 IPR010865 Protein of unknown function DUF1499 FORC55_0496 98cf5a636f2317f835687ab7edf181b5 121 PIRSF PIRSF026426 1 119 2.7E-44 T 17-10-2018 IPR010865 Protein of unknown function DUF1499 FORC55_1707 608ca4c2ab3f61eda9c20cb9d91dc4c2 276 Pfam PF02517 CAAX protease self-immunity 174 263 2.4E-17 T 17-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 FORC55_2275 7d694fb7e0e6418f028051026c6bd76f 283 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 9 273 4.5E-102 T 17-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 FORC55_2275 7d694fb7e0e6418f028051026c6bd76f 283 SUPERFAMILY SSF161098 22 272 2.06E-54 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2275 7d694fb7e0e6418f028051026c6bd76f 283 Gene3D G3DSA:1.10.3720.10 19 277 1.8E-66 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_2275 7d694fb7e0e6418f028051026c6bd76f 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 280 6.6E-24 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2275 7d694fb7e0e6418f028051026c6bd76f 283 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 278 2.8E-124 T 17-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 FORC55_2091 6ee189bf27178088e1c464fb4c44b37c 1189 Pfam PF07916 TraG-like protein, N-terminal region 3 456 7.3E-106 T 17-10-2018 IPR012931 TraG-like, N-terminal FORC55_3312 1eca3b4a24944d2e01d394f003035708 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 1.1E-142 T 17-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 FORC55_3312 1eca3b4a24944d2e01d394f003035708 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 3.1E-129 T 17-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 FORC55_3175 758767696d81900e207c64bf61490148 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 3.2E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_3175 758767696d81900e207c64bf61490148 440 Pfam PF01609 Transposase DDE domain 129 350 2.6E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_3175 758767696d81900e207c64bf61490148 440 SUPERFAMILY SSF53098 106 419 1.59E-28 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1772 d1a415adba9f7e84d6582c88661b53e2 431 Pfam PF13726 Na+-H+ antiporter family 1 78 9.6E-31 T 17-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal FORC55_1772 d1a415adba9f7e84d6582c88661b53e2 431 Pfam PF03553 Na+/H+ antiporter family 140 425 5.7E-77 T 17-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 FORC55_1772 d1a415adba9f7e84d6582c88661b53e2 431 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 8.8E-7 T 17-10-2018 FORC55_1772 d1a415adba9f7e84d6582c88661b53e2 431 PRINTS PR00173 Glutamate-aspartate symporter signature 364 383 8.8E-7 T 17-10-2018 FORC55_1370 aae72cf6af99b182db73b969bce70b61 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.5E-21 T 17-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type FORC55_1370 aae72cf6af99b182db73b969bce70b61 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 2 48 4.4E-15 T 17-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type FORC55_1296 31bc1dce456e580fedf7d1eb5cbd8707 91 Pfam PF11173 Protein of unknown function (DUF2960) 1 75 1.8E-34 T 17-10-2018 IPR021343 Protein of unknown function DUF2960 FORC55_2329 620c739b8081643aa16870b9390a55b0 185 Pfam PF02325 YGGT family 109 173 4.8E-19 T 17-10-2018 IPR003425 CCB3/YggT GO:0016020 FORC55_2329 620c739b8081643aa16870b9390a55b0 185 Pfam PF02325 YGGT family 9 77 2.0E-20 T 17-10-2018 IPR003425 CCB3/YggT GO:0016020 FORC55_2787 bf774938c8b1ca8cd686da3fbd7e133e 338 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 28 324 5.2E-101 T 17-10-2018 IPR010732 Type VI secretion, TssG-like FORC55_2787 bf774938c8b1ca8cd686da3fbd7e133e 338 Pfam PF06996 Type VI secretion, TssG 28 324 1.1E-90 T 17-10-2018 IPR010732 Type VI secretion, TssG-like FORC55_0981 4effed3f6734217cafabb9a36b630c0e 249 Pfam PF01925 Sulfite exporter TauE/SafE 3 240 1.6E-47 T 17-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 FORC55_2306 82c7f3c86dd965c9bf226e75c743bab7 211 Pfam PF01810 LysE type translocator 15 200 3.4E-39 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_1094 1b3150febf70af07c68b9ac912782770 95 Gene3D G3DSA:3.30.50.20 23 91 2.3E-22 T 17-10-2018 FORC55_1094 1b3150febf70af07c68b9ac912782770 95 Pfam PF07102 Protein of unknown function (DUF1364) 7 90 3.6E-23 T 17-10-2018 IPR010774 Protein of unknown function DUF1364 FORC55_1774 397026c8b1c95a870adcc20b9cf6e664 163 Pfam PF02674 Colicin V production protein 4 142 5.0E-36 T 17-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 384 2.3E-132 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 Pfam PF03222 Tryptophan/tyrosine permease family 3 391 2.6E-129 T 17-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 144 164 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 39 58 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 315 333 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 336 355 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 84 104 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_2840 22b571780a12827c857f91b89bde7e56 404 PRINTS PR00166 Aromatic amino acid permease signature 12 35 6.4E-81 T 17-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 FORC55_3508 a78f546bb13a81b522679a1d7fee6e62 199 Gene3D G3DSA:3.80.10.10 20 195 5.4E-8 T 17-10-2018 IPR032675 Leucine-rich repeat domain superfamily FORC55_0704 4b36755e60ffc97d269862ddec697f9f 118 Pfam PF11169 Protein of unknown function (DUF2956) 9 113 6.8E-40 T 17-10-2018 IPR021339 Protein of unknown function DUF2956 FORC55_2112 8a86e3a7bb320bdea82edd645a28ab03 272 Pfam PF03837 RecT family 38 193 4.6E-23 T 17-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 FORC55_2112 8a86e3a7bb320bdea82edd645a28ab03 272 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 15 189 5.0E-25 T 17-10-2018 IPR010183 Bacteriophage lambda, Bet FORC55_0650 cea0868dbe3dae9409be9ea3aaaebc3f 144 PIRSF PIRSF028687 1 144 1.5E-61 T 17-10-2018 IPR007293 Flagellar protein FlgP FORC55_0650 cea0868dbe3dae9409be9ea3aaaebc3f 144 Pfam PF02169 LPP20 lipoprotein 29 119 6.0E-8 T 17-10-2018 IPR024952 Lipoprotein LPP20-like FORC55_0780 76c397fc20512e941d09016ece0ad2d5 122 Pfam PF00072 Response regulator receiver domain 3 115 1.0E-32 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0780 76c397fc20512e941d09016ece0ad2d5 122 SMART SM00448 1 115 5.7E-35 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 FORC55_0780 76c397fc20512e941d09016ece0ad2d5 122 Gene3D G3DSA:3.40.50.2300 1 122 3.8E-40 T 17-10-2018 FORC55_0780 76c397fc20512e941d09016ece0ad2d5 122 SUPERFAMILY SSF52172 1 120 3.56E-37 T 17-10-2018 IPR011006 CheY-like superfamily FORC55_0646 b7f8fc9f52172bafe83d4db3fa20d6ff 271 SUPERFAMILY SSF63380 15 128 6.81E-8 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel FORC55_0646 b7f8fc9f52172bafe83d4db3fa20d6ff 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 16 127 1.4E-33 T 17-10-2018 IPR013113 FAD-binding 9, siderophore-interacting FORC55_0646 b7f8fc9f52172bafe83d4db3fa20d6ff 271 Gene3D G3DSA:2.40.30.10 2 127 1.1E-31 T 17-10-2018 FORC55_0646 b7f8fc9f52172bafe83d4db3fa20d6ff 271 Pfam PF04954 Siderophore-interacting protein 134 253 2.0E-33 T 17-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain FORC55_0646 b7f8fc9f52172bafe83d4db3fa20d6ff 271 Gene3D G3DSA:3.40.50.80 131 270 2.2E-38 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain FORC55_3422 c30c5ca2e1d5180712aefab9676ac3d1 446 SUPERFAMILY SSF53613 45 429 4.78E-43 T 17-10-2018 IPR029056 Ribokinase-like FORC55_3422 c30c5ca2e1d5180712aefab9676ac3d1 446 Pfam PF00294 pfkB family carbohydrate kinase 151 305 2.8E-9 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB FORC55_3017 882092c23824c2c8bcbcfbe6f62eb87e 90 Pfam PF04875 Protein of unknown function, DUF645 39 89 1.8E-32 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_2360 ff3d875ac2b5b3b112eda38c189ab3ca 145 PRINTS PR01438 Universal stress protein signature 102 114 1.4E-11 T 17-10-2018 IPR006015 Universal stress protein A FORC55_2360 ff3d875ac2b5b3b112eda38c189ab3ca 145 PRINTS PR01438 Universal stress protein signature 2 20 1.4E-11 T 17-10-2018 IPR006015 Universal stress protein A FORC55_2360 ff3d875ac2b5b3b112eda38c189ab3ca 145 PRINTS PR01438 Universal stress protein signature 120 142 1.4E-11 T 17-10-2018 IPR006015 Universal stress protein A FORC55_2360 ff3d875ac2b5b3b112eda38c189ab3ca 145 Gene3D G3DSA:3.40.50.620 1 142 4.3E-38 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold FORC55_2360 ff3d875ac2b5b3b112eda38c189ab3ca 145 Pfam PF00582 Universal stress protein family 1 142 1.1E-34 T 17-10-2018 IPR006016 UspA FORC55_2360 ff3d875ac2b5b3b112eda38c189ab3ca 145 PIRSF PIRSF006276 1 145 4.3E-20 T 17-10-2018 IPR006015 Universal stress protein A FORC55_2360 ff3d875ac2b5b3b112eda38c189ab3ca 145 SUPERFAMILY SSF52402 2 143 4.74E-37 T 17-10-2018 FORC55_1256 bb53c8620822a6e07aedae6f8ce6b2a6 152 Pfam PF09900 Predicted membrane protein (DUF2127) 7 143 4.1E-43 T 17-10-2018 IPR021125 Protein of unknown function DUF2127 FORC55_3627 c8fcab0a3a2914da913f436acd447828 126 PIRSF PIRSF028777 1 122 5.5E-46 T 17-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 FORC55_3627 c8fcab0a3a2914da913f436acd447828 126 Pfam PF03733 Inner membrane component domain 1 37 3.6E-10 T 17-10-2018 IPR005185 Inner membrane component domain FORC55_3627 c8fcab0a3a2914da913f436acd447828 126 Pfam PF03733 Inner membrane component domain 60 110 7.7E-19 T 17-10-2018 IPR005185 Inner membrane component domain FORC55_1528 d90723ac3c16f02ef93ca4d1623c1533 420 Gene3D G3DSA:1.20.1420.20 15 402 1.7E-85 T 17-10-2018 IPR038352 Imelysin-like domain superfamily FORC55_1528 d90723ac3c16f02ef93ca4d1623c1533 420 Pfam PF09375 Imelysin 40 398 6.4E-97 T 17-10-2018 IPR018976 Imelysin-like domain FORC55_2878 38e311beabb622c19c922db1ea4e3286 599 SUPERFAMILY SSF52540 35 259 8.59E-7 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_2923 8bec14fc178aa6c71f17f5278ac21eb4 181 Pfam PF08747 Domain of unknown function (DUF1788) 97 174 2.7E-8 T 17-10-2018 IPR014858 Protein of unknown function DUF1788 FORC55_1817 e407b2d602906750edb8172b62d74ee0 156 Pfam PF07295 Zinc-ribbon containing domain 14 153 2.3E-49 T 17-10-2018 IPR009912 Zinc-ribbon containing domain FORC55_1265 bbf6b9e068fe0903720866c187ceb815 404 Pfam PF12704 MacB-like periplasmic core domain 19 237 2.6E-23 T 17-10-2018 IPR025857 MacB-like periplasmic core domain FORC55_1265 bbf6b9e068fe0903720866c187ceb815 404 Pfam PF02687 FtsX-like permease family 305 396 3.2E-12 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 FORC55_1848 011248e4d2f32d86f575cc11df64c9aa 446 Gene3D G3DSA:3.40.50.12780 37 348 1.6E-71 T 17-10-2018 FORC55_1848 011248e4d2f32d86f575cc11df64c9aa 446 Pfam PF00501 AMP-binding enzyme 108 274 2.2E-5 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 FORC55_1848 011248e4d2f32d86f575cc11df64c9aa 446 SUPERFAMILY SSF56801 98 437 1.31E-18 T 17-10-2018 FORC55_2150 4172984a9643eb3c0003473133ae44b2 429 Pfam PF03743 Bacterial conjugation TrbI-like protein 213 416 2.9E-39 T 17-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI FORC55_1239 c31e0e18dfca435ab9ad29fe0b8d6c7a 477 Pfam PF07690 Major Facilitator Superfamily 18 408 3.2E-50 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_1239 c31e0e18dfca435ab9ad29fe0b8d6c7a 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 FORC55_1239 c31e0e18dfca435ab9ad29fe0b8d6c7a 477 Gene3D G3DSA:1.20.1250.20 260 467 1.2E-16 T 17-10-2018 FORC55_1239 c31e0e18dfca435ab9ad29fe0b8d6c7a 477 SUPERFAMILY SSF103473 4 466 7.06E-59 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_1239 c31e0e18dfca435ab9ad29fe0b8d6c7a 477 Gene3D G3DSA:1.20.1720.10 13 250 3.3E-48 T 17-10-2018 FORC55_1272 2013be12ca60172c91df46a21dc9d050 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 151 1.8E-40 T 17-10-2018 IPR004375 YhcH/YjgK/YiaL family FORC55_1272 2013be12ca60172c91df46a21dc9d050 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 5.9E-38 T 17-10-2018 IPR004375 YhcH/YjgK/YiaL family FORC55_1272 2013be12ca60172c91df46a21dc9d050 156 Gene3D G3DSA:2.60.120.370 1 153 1.8E-36 T 17-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily FORC55_1272 2013be12ca60172c91df46a21dc9d050 156 SUPERFAMILY SSF51197 1 152 2.14E-39 T 17-10-2018 FORC55_1730 05a83851c4ba4b20e29b9378146f3779 70 Pfam PF04304 Protein of unknown function (DUF454) 1 59 2.3E-9 T 17-10-2018 IPR007401 Protein of unknown function DUF454 FORC55_1203 dd301f468136f3ab77aa4a1b28da4e5f 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 213 2.9E-88 T 17-10-2018 IPR021316 Protein of unknown function DUF2913 FORC55_1793 179f856634bbf522b185fe4a10110c58 173 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 3 172 2.0E-86 T 17-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 FORC55_1793 179f856634bbf522b185fe4a10110c58 173 Pfam PF17323 Trans-membrane regulatory protein ToxS 22 170 3.1E-71 T 17-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 FORC55_2713 6eefd29d7927a25a437d2334a79137c9 211 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 210 29.539 T 17-10-2018 IPR018635 Uncharacterised protein family UPF0319 FORC55_2713 6eefd29d7927a25a437d2334a79137c9 211 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 205 7.6E-53 T 17-10-2018 IPR018635 Uncharacterised protein family UPF0319 FORC55_0727 fefa2a43bd503713fe2e373fa23e1cd9 129 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 7.3E-23 T 17-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 FORC55_0727 fefa2a43bd503713fe2e373fa23e1cd9 129 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 4.3E-19 T 17-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 FORC55_3109 2f52366d2fcd74c3c53cc907bf858d51 178 Pfam PF06042 Nucleotidyltransferase 21 176 3.2E-58 T 17-10-2018 IPR009267 Putative nucleotidyltransferase FORC55_0097 988660164feba4362e293b72dae28ae4 399 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 59 388 3.6E-103 T 17-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX FORC55_0684 fe762cc023128d9d5a9383f763e544b2 145 Pfam PF09842 Predicted membrane protein (DUF2069) 18 120 1.4E-33 T 17-10-2018 IPR018643 Protein of unknown function DUF2069, membrane FORC55_1741 e0c97b9c04b0c325372d2ce1d491c09a 201 Gene3D G3DSA:3.40.50.300 11 201 2.5E-70 T 17-10-2018 FORC55_1741 e0c97b9c04b0c325372d2ce1d491c09a 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 7 26 3.9E-7 T 17-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 FORC55_1741 e0c97b9c04b0c325372d2ce1d491c09a 201 SUPERFAMILY SSF52540 12 201 5.32E-72 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_1741 e0c97b9c04b0c325372d2ce1d491c09a 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 3.7E-71 T 17-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 FORC55_1741 e0c97b9c04b0c325372d2ce1d491c09a 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 2.1E-58 T 17-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 FORC55_1741 e0c97b9c04b0c325372d2ce1d491c09a 201 PIRSF PIRSF015617 6 201 2.4E-66 T 17-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 FORC55_1552 f7d54b28d0b89a240eda89da531856c1 261 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 261 47.948 T 17-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 FORC55_1552 f7d54b28d0b89a240eda89da531856c1 261 Pfam PF02654 Cobalamin-5-phosphate synthase 15 249 2.6E-54 T 17-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 FORC55_1552 f7d54b28d0b89a240eda89da531856c1 261 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 12 249 5.2E-35 T 17-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 FORC55_1663 8afc0de8f260d7d70956e24493216e13 269 Pfam PF07103 Protein of unknown function (DUF1365) 14 256 1.1E-70 T 17-10-2018 IPR010775 Protein of unknown function DUF1365 FORC55_1845 fea01a29136f9f22a3f457bde3aa269b 245 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 225 1.5E-61 T 17-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 FORC55_1845 fea01a29136f9f22a3f457bde3aa269b 245 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 58 229 2.2E-50 T 17-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 FORC55_2050 d2704d6c7fa1d6196a2e03022d867733 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 436 1.9E-21 T 17-10-2018 IPR025299 CstA, C-terminal domain FORC55_2050 d2704d6c7fa1d6196a2e03022d867733 494 Pfam PF02554 Carbon starvation protein CstA 148 294 2.2E-19 T 17-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 FORC55_2050 d2704d6c7fa1d6196a2e03022d867733 494 Pfam PF02554 Carbon starvation protein CstA 5 144 5.7E-33 T 17-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 FORC55_0330 cee452b5130b35f922977d36e6a884d1 238 SUPERFAMILY SSF52540 8 228 7.83E-51 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0330 cee452b5130b35f922977d36e6a884d1 238 Pfam PF00005 ABC transporter 32 184 1.5E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 FORC55_0330 cee452b5130b35f922977d36e6a884d1 238 Gene3D G3DSA:3.40.50.300 10 230 1.1E-55 T 17-10-2018 FORC55_0330 cee452b5130b35f922977d36e6a884d1 238 SMART SM00382 39 232 4.3E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain FORC55_0010 334b09828fb998ee000e743954402262 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 3.5E-20 T 17-10-2018 IPR001727 Gdt1 family FORC55_0010 334b09828fb998ee000e743954402262 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.6E-20 T 17-10-2018 IPR001727 Gdt1 family FORC55_2198 e463ad05daf2e5f67ac91e256e9e5cbc 361 Pfam PF01594 AI-2E family transporter 14 347 1.4E-56 T 17-10-2018 IPR002549 Transmembrane protein TqsA-like FORC55_2375 cfb49fccb5a06dbe6b1b08b66d5ab157 1109 SUPERFAMILY SSF49899 135 396 1.17E-22 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily FORC55_0319 22efd8c3434d3f3e5f390ab2d97d0964 149 Gene3D G3DSA:3.40.630.30 1 149 1.6E-46 T 17-10-2018 FORC55_0319 22efd8c3434d3f3e5f390ab2d97d0964 149 SUPERFAMILY SSF55729 1 148 6.62E-38 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_0319 22efd8c3434d3f3e5f390ab2d97d0964 149 Pfam PF13673 Acetyltransferase (GNAT) domain 45 148 2.0E-18 T 17-10-2018 IPR000182 GNAT domain FORC55_1207 1561221fd825632b299a1e09f02b2f47 817 Pfam PF02687 FtsX-like permease family 715 809 2.9E-10 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 FORC55_1207 1561221fd825632b299a1e09f02b2f47 817 Pfam PF02687 FtsX-like permease family 271 368 1.4E-8 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 FORC55_0063 f41811c854fd87bff7a0c17b79982caa 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 34.875 T 17-10-2018 IPR019598 Universal stress protein B FORC55_0063 f41811c854fd87bff7a0c17b79982caa 107 Pfam PF10625 Universal stress protein B (UspB) 1 107 1.2E-51 T 17-10-2018 IPR019598 Universal stress protein B FORC55_0705 33767415e76d4daafa9912280ebe4f33 154 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 2.1E-54 T 17-10-2018 IPR021318 Protein of unknown function DUF2919 FORC55_1182 6490527438c2bdd89823d7b601ef4a12 417 Pfam PF03222 Tryptophan/tyrosine permease family 30 385 1.4E-12 T 17-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 FORC55_3584 0557734a58a3bd59e952317106906bd6 239 Pfam PF03591 AzlC protein 27 165 5.7E-35 T 17-10-2018 IPR011606 Branched-chain amino acid transport, permease FORC55_0028 c67075e59dd809f52a91dcc54ae9720d 183 Pfam PF11355 Protein of unknown function (DUF3157) 3 182 5.9E-63 T 17-10-2018 IPR021501 Protein of unknown function DUF3157 FORC55_2828 aadb0e3d9b5c61af78f44b693d80da46 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 5.7E-15 T 17-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 FORC55_2828 aadb0e3d9b5c61af78f44b693d80da46 95 Gene3D G3DSA:3.40.50.2300 1 90 1.1E-20 T 17-10-2018 FORC55_2828 aadb0e3d9b5c61af78f44b693d80da46 95 SUPERFAMILY SSF52794 1 91 1.67E-21 T 17-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 FORC55_3460 54c6b75e31c9ce8bf34c8bfd67ce126a 204 Pfam PF01810 LysE type translocator 15 201 5.8E-33 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_3460 54c6b75e31c9ce8bf34c8bfd67ce126a 204 PIRSF PIRSF006324 1 203 1.3E-41 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 FORC55_0540 369d4412b004069e2a5f0a7fa50dc61a 414 Pfam PF05940 NnrS protein 36 408 1.6E-106 T 17-10-2018 IPR010266 NnrS FORC55_0564 49d290bfe9b5130ce6ceeeea8cdddd70 191 Pfam PF03923 Uncharacterized lipoprotein 28 186 6.2E-53 T 17-10-2018 IPR005619 Uncharacterised protein family, YajG FORC55_3031 96c630dc2b0fb34f3d46d081bc7fbd61 237 Gene3D G3DSA:1.10.3290.10 2 232 2.2E-34 T 17-10-2018 IPR036597 Fido-like domain superfamily FORC55_3031 96c630dc2b0fb34f3d46d081bc7fbd61 237 Pfam PF02661 Fic/DOC family 87 180 1.5E-9 T 17-10-2018 IPR003812 Fido domain FORC55_3031 96c630dc2b0fb34f3d46d081bc7fbd61 237 SUPERFAMILY SSF140931 62 225 3.01E-18 T 17-10-2018 IPR036597 Fido-like domain superfamily FORC55_3058 921ee7b9fdf2411b62c6750f873d89b9 383 Pfam PF13007 Transposase C of IS166 homeodomain 38 108 7.2E-13 T 17-10-2018 IPR024463 Transposase TnpC, homeodomain FORC55_3058 921ee7b9fdf2411b62c6750f873d89b9 383 Pfam PF13005 zinc-finger binding domain of transposase IS66 116 160 5.6E-17 T 17-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 FORC55_3058 921ee7b9fdf2411b62c6750f873d89b9 383 Pfam PF03050 Transposase IS66 family 180 371 1.0E-60 T 17-10-2018 IPR004291 Transposase, IS66 FORC55_1170 45f55e4ece6c915d78d6cc704dcaba7a 428 SUPERFAMILY SSF161070 1 427 2.88E-109 T 17-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 FORC55_1170 45f55e4ece6c915d78d6cc704dcaba7a 428 Pfam PF00209 Sodium:neurotransmitter symporter family 1 105 6.1E-15 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_1170 45f55e4ece6c915d78d6cc704dcaba7a 428 Pfam PF00209 Sodium:neurotransmitter symporter family 128 427 3.2E-26 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_1833 c6987829e35c220821c8e7ba67ccf29c 144 Pfam PF04892 VanZ like family 52 129 1.7E-7 T 17-10-2018 IPR006976 VanZ-like FORC55_2582 cccd10422b5296522694a4e1da7b5a6c 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 463 6.1E-134 T 17-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 FORC55_3024 f8f737723dc7eb986bcf8550ac4e0c6b 369 Pfam PF14022 Protein of unknown function (DUF4238) 7 272 1.3E-36 T 17-10-2018 IPR025332 Protein of unknown function DUF4238 FORC55_1434 d6af19a729626bb08958e28a98c637a7 401 Gene3D G3DSA:1.10.3720.10 185 397 2.2E-32 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1434 d6af19a729626bb08958e28a98c637a7 401 Gene3D G3DSA:1.10.3720.10 79 184 5.7E-14 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1434 d6af19a729626bb08958e28a98c637a7 401 SUPERFAMILY SSF161098 91 161 8.37E-12 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1434 d6af19a729626bb08958e28a98c637a7 401 SUPERFAMILY SSF161098 193 382 3.66E-25 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1434 d6af19a729626bb08958e28a98c637a7 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 6.7E-17 T 17-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 FORC55_1434 d6af19a729626bb08958e28a98c637a7 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 234 396 1.4E-12 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2242 c89dca5202b93c62e9ca8199403e2795 245 Pfam PF02167 Cytochrome C1 family 34 244 5.7E-15 T 17-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 FORC55_2242 c89dca5202b93c62e9ca8199403e2795 245 SUPERFAMILY SSF46626 16 209 7.88E-48 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_2242 c89dca5202b93c62e9ca8199403e2795 245 Gene3D G3DSA:1.10.760.10 25 210 2.7E-16 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 FORC55_0315 0e51f43497791e9b6cafd13a50d1f843 158 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 9 153 2.0E-33 T 17-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE FORC55_2844 34268a0e1610e03835650ef925e29b84 160 Gene3D G3DSA:2.40.440.10 13 160 1.6E-14 T 17-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like FORC55_2844 34268a0e1610e03835650ef925e29b84 160 SUPERFAMILY SSF141523 24 158 2.22E-23 T 17-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like FORC55_2844 34268a0e1610e03835650ef925e29b84 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 3.3E-16 T 17-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 FORC55_1885 d81601e47fd1843ee57fbf510b76ab9d 100 Pfam PF11743 Protein of unknown function (DUF3301) 5 96 2.2E-30 T 17-10-2018 IPR021732 Protein of unknown function DUF3301 FORC55_0844 d9dae512ed50605530e4da776cbc71ea 274 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 3.1E-76 T 17-10-2018 IPR021372 Protein of unknown function DUF2989 FORC55_1114 e3644e379c3e41205390af5bfc48ca79 344 SUPERFAMILY SSF56672 64 309 1.19E-23 T 17-10-2018 FORC55_1114 e3644e379c3e41205390af5bfc48ca79 344 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 72 268 9.8E-19 T 17-10-2018 IPR000477 Reverse transcriptase domain FORC55_3023 1bdd5789e115130c1ed40892b3d59e98 152 Pfam PF02517 CAAX protease self-immunity 49 142 1.7E-4 T 17-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 FORC55_3187 18b83f859d1d040bd7bb7f4da1e6ce1c 785 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 784 2.5E-293 T 17-10-2018 IPR010706 Fatty acid cis-trans isomerase FORC55_2967 8997b0e8709af59d0dcd7f621c13c897 276 Pfam PF11060 Protein of unknown function (DUF2861) 36 276 2.0E-71 T 17-10-2018 IPR021290 Protein of unknown function DUF2861 FORC55_0690 76907482268646f59e9ec946f8c2eabf 440 Pfam PF01609 Transposase DDE domain 129 350 6.4E-24 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_0690 76907482268646f59e9ec946f8c2eabf 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 1.3E-29 T 17-10-2018 IPR024473 Transposase, IS4, N-terminal FORC55_0690 76907482268646f59e9ec946f8c2eabf 440 SUPERFAMILY SSF53098 103 419 3.11E-29 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily FORC55_1796 c15b2d17222c724b7f129a77e047fcc9 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 295 4.7E-104 T 17-10-2018 IPR010099 Epimerase family protein SDR39U1 FORC55_1796 c15b2d17222c724b7f129a77e047fcc9 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 4.8E-15 T 17-10-2018 IPR013549 Domain of unknown function DUF1731 FORC55_1796 c15b2d17222c724b7f129a77e047fcc9 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 6.7E-23 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 FORC55_1796 c15b2d17222c724b7f129a77e047fcc9 304 SUPERFAMILY SSF51735 1 293 1.53E-42 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily FORC55_1796 c15b2d17222c724b7f129a77e047fcc9 304 Gene3D G3DSA:3.40.50.720 1 290 7.0E-77 T 17-10-2018 FORC55_1236 b6d9b06dedb52eed2492fe56e399e119 229 PIRSF PIRSF028063 1 221 3.8E-142 T 17-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger FORC55_1236 b6d9b06dedb52eed2492fe56e399e119 229 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 2.8E-35 T 17-10-2018 IPR024402 Domain of unknown function DUF2726 FORC55_1300 ff8c0f728adacb20c06488ed3aafce9d 232 SUPERFAMILY SSF161098 7 222 3.27E-32 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1300 ff8c0f728adacb20c06488ed3aafce9d 232 Gene3D G3DSA:1.10.3720.10 1 229 5.8E-30 T 17-10-2018 IPR035906 MetI-like superfamily FORC55_1300 ff8c0f728adacb20c06488ed3aafce9d 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 221 7.0E-10 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 FORC55_2283 45c31265466afcc7c123113f0f714f33 361 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 341 28.834 T 17-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2283 45c31265466afcc7c123113f0f714f33 361 SUPERFAMILY SSF55120 6 337 6.04E-97 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2283 45c31265466afcc7c123113f0f714f33 361 Gene3D G3DSA:3.30.2350.20 18 336 2.8E-105 T 17-10-2018 FORC55_2283 45c31265466afcc7c123113f0f714f33 361 Gene3D G3DSA:3.30.2340.10 170 301 2.8E-105 T 17-10-2018 FORC55_2283 45c31265466afcc7c123113f0f714f33 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 336 1.7E-20 T 17-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2283 45c31265466afcc7c123113f0f714f33 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 1.0E-40 T 17-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 FORC55_2283 45c31265466afcc7c123113f0f714f33 361 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 17-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 FORC55_1309 0e22e00bc868f4b01fe727d6ded06edf 223 SUPERFAMILY SSF89155 13 204 2.49E-55 T 17-10-2018 IPR036411 TorD-like superfamily FORC55_1309 0e22e00bc868f4b01fe727d6ded06edf 223 Pfam PF02613 Nitrate reductase delta subunit 49 169 5.5E-34 T 17-10-2018 IPR020945 DMSO/Nitrate reductase chaperone FORC55_1309 0e22e00bc868f4b01fe727d6ded06edf 223 Gene3D G3DSA:1.10.3480.10 7 207 8.5E-45 T 17-10-2018 FORC55_0812 e970d0da205af617595cbf6169966cb6 291 SUPERFAMILY SSF103481 194 290 1.7E-8 T 17-10-2018 FORC55_0812 e970d0da205af617595cbf6169966cb6 291 SUPERFAMILY SSF103481 38 143 5.62E-8 T 17-10-2018 FORC55_2497 e963eaf30c3d88b6234e28c919c4dfcb 225 Pfam PF16357 Putative PepSY_TM-like 33 218 4.4E-13 T 17-10-2018 IPR032307 Putative PepSY TM-like protein FORC55_1511 3ab98ae7a0e881bf284e5560e0016806 159 SUPERFAMILY SSF88713 22 102 2.78E-22 T 17-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 FORC55_1511 3ab98ae7a0e881bf284e5560e0016806 159 Pfam PF01522 Polysaccharide deacetylase 23 131 5.7E-16 T 17-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 FORC55_1511 3ab98ae7a0e881bf284e5560e0016806 159 Gene3D G3DSA:3.20.20.370 22 158 2.3E-36 T 17-10-2018 FORC55_3602 41b24f639d37e3562c2c54f36e298d6f 83 Pfam PF11280 Protein of unknown function (DUF3081) 6 81 2.3E-29 T 17-10-2018 IPR021432 Protein of unknown function DUF3081 FORC55_2539 3c5f3e7f78e53d5015fa87e4d41d9f5f 207 Pfam PF01609 Transposase DDE domain 2 174 1.1E-20 T 17-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 FORC55_0574 b1cc3177487d44ef443f67d1a913e392 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.1E-21 T 17-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM FORC55_1560 930848718fc8476e59b12403aa1d39c6 291 Pfam PF03547 Membrane transport protein 141 284 1.5E-10 T 17-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 FORC55_0638 77e12ae1f44a4427584dce34fcfd4df6 288 Pfam PF01963 TraB family 23 276 8.3E-53 T 17-10-2018 IPR002816 Pheromone shutdown, TraB FORC55_3030 e6d9bb0342169e65afff25e83c31bff5 53 Pfam PF13420 Acetyltransferase (GNAT) domain 2 42 3.2E-6 T 17-10-2018 FORC55_3030 e6d9bb0342169e65afff25e83c31bff5 53 SUPERFAMILY SSF55729 1 48 3.92E-15 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3030 e6d9bb0342169e65afff25e83c31bff5 53 Gene3D G3DSA:3.40.630.30 1 51 8.1E-16 T 17-10-2018 FORC55_1022 a14749f36a0e3f01fe62b47e1915b002 93 Pfam PF07383 Protein of unknown function (DUF1496) 34 78 9.3E-22 T 17-10-2018 IPR009971 Protein of unknown function DUF1496 FORC55_2725 d5eaceaedaeffe82b74db5849955f632 150 Gene3D G3DSA:2.60.40.1890 28 144 4.3E-37 T 17-10-2018 IPR036182 Copper chaperone PCuAC superfamily FORC55_2725 d5eaceaedaeffe82b74db5849955f632 150 Pfam PF04314 Copper chaperone PCu(A)C 25 131 3.3E-35 T 17-10-2018 IPR007410 Copper chaperone PCuAC FORC55_2725 d5eaceaedaeffe82b74db5849955f632 150 SUPERFAMILY SSF110087 3 141 6.54E-46 T 17-10-2018 IPR036182 Copper chaperone PCuAC superfamily FORC55_0333 b3020f4352ec28db191c45b22d514119 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 4.3E-76 T 17-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ FORC55_0333 b3020f4352ec28db191c45b22d514119 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 3.0E-99 T 17-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ FORC55_0333 b3020f4352ec28db191c45b22d514119 183 Gene3D G3DSA:3.40.30.10 20 179 1.9E-5 T 17-10-2018 FORC55_2897 bb447d9fa5896279e900f05fc31d322d 312 Pfam PF00561 alpha/beta hydrolase fold 37 228 1.5E-15 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_2897 bb447d9fa5896279e900f05fc31d322d 312 SUPERFAMILY SSF53474 32 309 5.65E-51 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2897 bb447d9fa5896279e900f05fc31d322d 312 Gene3D G3DSA:3.40.50.1820 30 312 9.6E-92 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2588 d5f1db571eead2f1d08e0fadb7b73721 775 SUPERFAMILY SSF52540 364 512 1.77E-6 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase FORC55_0478 ae5d25f42e824ca406868e05199453d4 157 Pfam PF05258 Protein of unknown function (DUF721) 11 89 1.5E-11 T 17-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 FORC55_0892 2c2354327767c438338b9a8fa7051db9 149 Pfam PF13279 Thioesterase-like superfamily 16 136 6.7E-21 T 17-10-2018 FORC55_0892 2c2354327767c438338b9a8fa7051db9 149 Gene3D G3DSA:3.10.129.10 2 137 4.7E-36 T 17-10-2018 FORC55_0892 2c2354327767c438338b9a8fa7051db9 149 SUPERFAMILY SSF54637 7 136 6.87E-31 T 17-10-2018 IPR029069 HotDog domain superfamily FORC55_3276 c9f410f032cfbafd9c42011fbb7b8195 171 SUPERFAMILY SSF55729 3 161 6.2E-23 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase FORC55_3276 c9f410f032cfbafd9c42011fbb7b8195 171 Gene3D G3DSA:3.40.630.30 26 150 3.7E-20 T 17-10-2018 FORC55_3276 c9f410f032cfbafd9c42011fbb7b8195 171 Pfam PF13302 Acetyltransferase (GNAT) domain 3 148 7.8E-11 T 17-10-2018 IPR000182 GNAT domain FORC55_2746 9ca54fdd833f1fa2b1f4426537f7294f 480 Pfam PF07603 Protein of unknown function (DUF1566) 296 434 6.2E-14 T 17-10-2018 IPR011460 Protein of unknown function DUF1566 FORC55_0361 aa1d85e7d6aec293ba4933ba05be9949 163 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 3.9E-55 T 17-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 FORC55_0361 aa1d85e7d6aec293ba4933ba05be9949 163 Pfam PF02470 MlaD protein 40 118 2.7E-20 T 17-10-2018 IPR003399 Mce/MlaD FORC55_1307 d552a51f43e237c943e54615ba77e376 194 Pfam PF11748 Protein of unknown function (DUF3306) 7 115 1.1E-20 T 17-10-2018 IPR021735 Protein of unknown function DUF3306 FORC55_0515 750216e82c1cf36130483e23c2a7df1d 59 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 3.3E-24 T 17-10-2018 IPR021932 Protein of unknown function DUF3545 FORC55_0433 e20b8b6a9e1044f8dd2db13dae16cd87 420 Pfam PF01384 Phosphate transporter family 26 407 5.8E-112 T 17-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 FORC55_0109 1438fd5ab9e71c305f6976f6a7783b06 514 PIRSF PIRSF028175 1 514 4.9E-303 T 17-10-2018 IPR014540 Uncharacterised conserved protein UCP028175 FORC55_2133 4a2d76038749b564abb8c0298878d477 153 SUPERFAMILY SSF58113 33 147 3.4E-6 T 17-10-2018 FORC55_2133 4a2d76038749b564abb8c0298878d477 153 Gene3D G3DSA:1.20.120.20 18 148 2.9E-6 T 17-10-2018 FORC55_3106 6f8ef902610f7e1777ba3e0bbedc314f 60 Pfam PF04875 Protein of unknown function, DUF645 2 60 2.3E-36 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_2510 05df0c3abac905a2142b79b46c5d9d15 126 Gene3D G3DSA:3.40.960.10 16 118 2.5E-31 T 17-10-2018 FORC55_2510 05df0c3abac905a2142b79b46c5d9d15 126 Pfam PF04480 Protein of unknown function (DUF559) 9 114 2.2E-30 T 17-10-2018 IPR007569 Protein of unknown function DUF559 FORC55_2510 05df0c3abac905a2142b79b46c5d9d15 126 SUPERFAMILY SSF52980 4 119 5.9E-18 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_3271 dacbeb5b0b511d5ae445725598c943b9 170 Pfam PF00588 SpoU rRNA Methylase family 7 140 3.2E-19 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 FORC55_3271 dacbeb5b0b511d5ae445725598c943b9 170 SUPERFAMILY SSF75217 6 144 2.51E-27 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases FORC55_3271 dacbeb5b0b511d5ae445725598c943b9 170 Gene3D G3DSA:3.40.1280.10 7 150 1.1E-18 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal FORC55_1288 159dc3d2fa25970b8e9576a368f5a31e 67 PIRSF PIRSF037225 1 65 3.4E-26 T 17-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 FORC55_1288 159dc3d2fa25970b8e9576a368f5a31e 67 Pfam PF14255 Cysteine-rich CPXCG 9 60 7.4E-21 T 17-10-2018 IPR025990 Cysteine-rich CPXCG protein FORC55_0831 363d688659106050023a5c9877877e51 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0831 363d688659106050023a5c9877877e51 486 SUPERFAMILY SSF161070 3 471 4.58E-150 T 17-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 FORC55_0831 363d688659106050023a5c9877877e51 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 9.0E-36 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0831 363d688659106050023a5c9877877e51 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 9.0E-36 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0831 363d688659106050023a5c9877877e51 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 9.0E-36 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0831 363d688659106050023a5c9877877e51 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 9.0E-36 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0831 363d688659106050023a5c9877877e51 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 9.0E-36 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0831 363d688659106050023a5c9877877e51 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 9.0E-36 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0831 363d688659106050023a5c9877877e51 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 9.0E-36 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_0831 363d688659106050023a5c9877877e51 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 467 4.1E-80 T 17-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 FORC55_1099 839161c73d172556424ae0a670e5b9c3 148 Pfam PF03245 Bacteriophage Rz lysis protein 26 146 1.2E-27 T 17-10-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 FORC55_1599 9c4f84b7ce9483e19a23755d98dc3292 254 Pfam PF02698 DUF218 domain 72 209 9.8E-21 T 17-10-2018 IPR003848 Domain of unknown function DUF218 FORC55_3190 7fb753f44aa9feb9c0070cdea9b9955c 180 Pfam PF11810 Domain of unknown function (DUF3332) 6 174 2.7E-45 T 17-10-2018 IPR021768 Protein of unknown function DUF3332 FORC55_1659 69084cc019001877fb49f539e80a3144 175 Pfam PF12915 Protein of unknown function (DUF3833) 13 173 2.5E-65 T 17-10-2018 IPR024409 Protein of unknown function DUF3833 FORC55_1152 74179ad6b9bb24e1e5f3562a3af917d1 256 Pfam PF11150 Protein of unknown function (DUF2927) 28 227 8.1E-64 T 17-10-2018 IPR021323 Protein of unknown function DUF2927 FORC55_2060 fe5e7ede353bacee739a1ceaeb51a036 382 Pfam PF02690 Na+/Pi-cotransporter 218 324 4.1E-19 T 17-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 FORC55_2060 fe5e7ede353bacee739a1ceaeb51a036 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 1.8E-22 T 17-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 FORC55_1545 987e8026578ec1fff1e672f4ce9141ec 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 1.1E-33 T 17-10-2018 IPR021284 Protein of unknown function DUF2750 FORC55_0576 5d85db022740c20e2e18c8d8356f407f 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 2.2E-69 T 17-10-2018 IPR021307 Protein of unknown function DUF2884 FORC55_2763 90b56511f0d644787d7fb5a5a6c6ed9a 400 Gene3D G3DSA:1.20.1250.20 6 391 3.1E-23 T 17-10-2018 FORC55_2763 90b56511f0d644787d7fb5a5a6c6ed9a 400 SUPERFAMILY SSF103473 11 389 4.05E-32 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_2747 639868f335d58f5b2afb9698509789b4 187 Pfam PF07603 Protein of unknown function (DUF1566) 41 177 2.8E-22 T 17-10-2018 IPR011460 Protein of unknown function DUF1566 FORC55_2767 2965d04f573d46fa7a5a3444bbdf6914 73 Pfam PF02001 Protein of unknown function DUF134 5 66 1.2E-12 T 17-10-2018 IPR002852 Uncharacterised protein family UPF0251 FORC55_3074 53f293b6a3bbad58d953cf210cc9d65b 79 Pfam PF04875 Protein of unknown function, DUF645 21 79 6.8E-33 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_2022 b7771561fa173cec0b8cd73ff91776a1 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 4.7E-123 T 17-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 FORC55_2022 b7771561fa173cec0b8cd73ff91776a1 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.118 T 17-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 FORC55_2092 985e438a005fc9e3698a3bf32ee6b557 462 Pfam PF06122 Conjugative relaxosome accessory transposon protein 28 388 6.4E-108 T 17-10-2018 IPR010927 Type IV conjugative transfer system protein TraH FORC55_0799 e7768905bd81082b93cc359c2fef5b3c 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 7.0E-65 T 17-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) FORC55_0505 512762e39708231879d9e71fba32a3e0 129 Pfam PF11697 Protein of unknown function (DUF3293) 31 99 4.0E-18 T 17-10-2018 IPR021710 Protein of unknown function DUF3293 FORC55_3612 7a532cf08b096ca18ac9043bb1f92c02 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 2.1E-36 T 17-10-2018 IPR021724 Protein of unknown function DUF3297 FORC55_1013 cc345afcbf920919d890c2fde0917d9f 157 Pfam PF01936 NYN domain 3 151 1.9E-40 T 17-10-2018 IPR021139 NYN domain, limkain-b1-type FORC55_1013 cc345afcbf920919d890c2fde0917d9f 157 Gene3D G3DSA:3.40.50.1010 1 157 2.5E-55 T 17-10-2018 FORC55_2754 cbbe3949df4b72e2d939bea04befa98a 458 Pfam PF07670 Nucleoside recognition 144 237 3.2E-8 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 FORC55_0221 3d0f6eae232d4bb1e072cabcc4114a71 146 Pfam PF05656 Protein of unknown function (DUF805) 8 139 1.2E-21 T 17-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1198 1214 7.7E-4 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 121 138 0.0035 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1107 1119 1.6 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 187 204 0.085 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 101 118 0.092 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 207 224 0.14 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 275 291 0.14 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1255 1272 1.7 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1045 1057 18.0 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 931 947 2.4 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 988 1003 0.011 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 874 888 0.05 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 621 638 0.012 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1122 1139 0.58 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1312 1329 0.31 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1217 1233 0.8 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 141 157 0.0039 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1293 1310 0.83 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 836 852 0.056 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 893 907 1.0 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 161 184 2.2E-4 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 855 872 0.13 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1141 1156 0.13 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1239 1253 10.0 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1160 1176 0.38 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1064 1076 1.4 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 738 750 7.3 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1012 1023 15.0 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1084 1099 0.067 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 912 929 0.17 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 641 655 0.98 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 581 598 0.27 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 798 813 0.013 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1028 1040 0.1 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 601 617 2.1 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 756 768 0.62 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 255 272 0.88 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 1181 1196 0.0069 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 779 795 0.046 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 969 981 1.9 T 17-10-2018 IPR011509 RtxA toxin FORC55_1352 2323ee1ba8e6e05cd04f04ccb3afa73f 1386 Pfam PF07634 RtxA repeat 817 833 0.0079 T 17-10-2018 IPR011509 RtxA toxin FORC55_1235 87e39c894d4663aed9247a6581b7f3bd 267 SUPERFAMILY SSF53850 36 246 1.69E-8 T 17-10-2018 FORC55_1532 74430838dd1b3c9c2e898dd621ee4847 404 Gene3D G3DSA:1.20.1250.20 1 191 5.4E-17 T 17-10-2018 FORC55_1532 74430838dd1b3c9c2e898dd621ee4847 404 Gene3D G3DSA:1.20.1250.20 207 392 2.4E-19 T 17-10-2018 FORC55_1532 74430838dd1b3c9c2e898dd621ee4847 404 SUPERFAMILY SSF103473 5 389 1.07E-42 T 17-10-2018 IPR036259 MFS transporter superfamily FORC55_1532 74430838dd1b3c9c2e898dd621ee4847 404 Pfam PF07690 Major Facilitator Superfamily 217 384 4.2E-15 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_1532 74430838dd1b3c9c2e898dd621ee4847 404 Pfam PF07690 Major Facilitator Superfamily 11 198 1.9E-12 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 FORC55_3196 912e0766c538eac10935b9fe645fc3ac 92 Pfam PF10115 Transcriptional activator HlyU 2 91 8.8E-39 T 17-10-2018 IPR018772 Transcription activator HlyU FORC55_1375 3a3eea86cc610e4bd290ddc912220a35 219 Pfam PF11205 Protein of unknown function (DUF2987) 22 165 1.2E-54 T 17-10-2018 IPR021370 Protein of unknown function DUF2987 FORC55_3018 cc4218695a2c509a1f9f07cc8e13dac5 259 SUPERFAMILY SSF53474 3 256 4.51E-23 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_3018 cc4218695a2c509a1f9f07cc8e13dac5 259 Pfam PF12697 Alpha/beta hydrolase family 12 248 6.2E-9 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 FORC55_3018 cc4218695a2c509a1f9f07cc8e13dac5 259 Gene3D G3DSA:3.40.50.1820 1 258 7.2E-24 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_2068 2fb848f51b7e0a7c47d31a35bf2cf914 344 Pfam PF00248 Aldo/keto reductase family 15 335 4.2E-73 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain FORC55_2068 2fb848f51b7e0a7c47d31a35bf2cf914 344 Gene3D G3DSA:3.20.20.100 1 344 4.7E-133 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily FORC55_2068 2fb848f51b7e0a7c47d31a35bf2cf914 344 SUPERFAMILY SSF51430 1 344 1.96E-108 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily FORC55_0222 c7d0abc619a4939412373bdfd4e3d5a7 119 Pfam PF11333 Protein of unknown function (DUF3135) 14 93 4.5E-34 T 17-10-2018 IPR021482 Protein of unknown function DUF3135 FORC55_3185 a1826b881c96fdfed53c4239f0c03a5e 342 Pfam PF02163 Peptidase family M50 209 244 4.2E-7 T 17-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 FORC55_1844 2ce6ab128eaa920710043d6e8159462b 263 Gene3D G3DSA:2.60.40.3880 23 150 2.2E-67 T 17-10-2018 FORC55_1844 2ce6ab128eaa920710043d6e8159462b 263 Gene3D G3DSA:2.60.40.3880 151 263 1.5E-51 T 17-10-2018 FORC55_2927 871af129454ccf9651bf3d6307c42302 678 Pfam PF08665 PglZ domain 443 599 1.6E-8 T 17-10-2018 IPR013973 PglZ domain FORC55_1102 7064eca0ed3e87084e003c60b1cd29b3 513 Gene3D G3DSA:3.40.50.300 7 235 2.0E-27 T 17-10-2018 FORC55_1102 7064eca0ed3e87084e003c60b1cd29b3 513 Gene3D G3DSA:3.30.420.280 293 492 8.0E-13 T 17-10-2018 FORC55_2888 d6e92d359f31b57393bb82d4af30207b 324 Gene3D G3DSA:3.40.50.2300 135 318 4.0E-14 T 17-10-2018 FORC55_2888 d6e92d359f31b57393bb82d4af30207b 324 Gene3D G3DSA:3.40.50.2300 62 298 4.0E-14 T 17-10-2018 FORC55_2587 70350f042dd94911f416dd21023666a4 875 Pfam PF09823 Domain of unknown function (DUF2357) 152 398 2.0E-70 T 17-10-2018 IPR018633 Domain of unknown function DUF2357 FORC55_2587 70350f042dd94911f416dd21023666a4 875 Pfam PF04411 PD-(D/E)XK nuclease superfamily 421 611 1.0E-41 T 17-10-2018 IPR007505 PD-(D/E)XK nuclease superfamily 7 FORC55_1194 c22e428523e8df9b8aa894d57d94b481 133 Pfam PF12614 Ribosome recycling factor 5 130 5.7E-54 T 17-10-2018 IPR022253 Ribosome recycling factor. bacterial FORC55_3289 405d839f7ec228526afee07ed40d6c24 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 1.2E-14 T 17-10-2018 IPR021309 Protein of unknown function DUF2892 FORC55_0431 ebbe8d8dab51d99984be663f8b48c4ff 256 Pfam PF16537 Type II secretion system protein B 191 250 4.0E-23 T 17-10-2018 IPR032389 Type II secretion system protein B FORC55_0683 9b2defd3d780e4bb3a990c0fd3eba7a3 382 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 4.2E-69 T 17-10-2018 IPR018642 Protein of unknown function DUF2066 FORC55_2389 60f1729e3889cb92a5fc8c3998175356 216 Pfam PF04612 Type II secretion system (T2SS), protein M 6 99 2.0E-8 T 17-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 FORC55_1306 7d84988cd8295d18764e413474b28a1f 187 Pfam PF11749 Protein of unknown function (DUF3305) 82 177 2.7E-18 T 17-10-2018 IPR021736 Protein of unknown function DUF3305 FORC55_2827 46f2c1304a106645b347d7b55cc7404a 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 9.0E-144 T 17-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 FORC55_1584 8dbe91ea8691e9c06d153abea1bb2177 88 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 66 86 1.2E-6 T 17-10-2018 IPR020008 GlyGly-CTERM domain FORC55_1584 8dbe91ea8691e9c06d153abea1bb2177 88 Gene3D G3DSA:2.60.40.10 1 61 4.0E-29 T 17-10-2018 IPR013783 Immunoglobulin-like fold FORC55_0195 c08a812e6defbac13365b0110f27cb4d 161 Pfam PF04186 FxsA cytoplasmic membrane protein 8 113 1.6E-35 T 17-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 FORC55_1484 135329a58f898e9598b10fa2a4352e55 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.0E-71 T 17-10-2018 IPR021334 Protein of unknown function DUF2947 FORC55_2507 a2885b1710a2de268bde99d639e2c1a5 229 PIRSF PIRSF028160 1 229 2.7E-123 T 17-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 FORC55_2507 a2885b1710a2de268bde99d639e2c1a5 229 Pfam PF07356 Protein of unknown function (DUF1481) 33 226 8.6E-59 T 17-10-2018 IPR010858 Protein of unknown function DUF1481 FORC55_1125 13e63aaf69d36b0241447720e05e7ad3 163 SUPERFAMILY SSF52980 21 105 2.82E-7 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 FORC55_1366 51b1957681c042f3a5ca90e4cf021736 54 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 4.5E-15 T 17-10-2018 IPR008621 Cbb3-type cytochrome oxidase component FORC55_1737 0dc09db90f462d4eb4c77d8d727d7917 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 239 2.6E-85 T 17-10-2018 IPR021806 Protein of unknown function DUF3379 FORC55_1919 5a22f07ab00602d81bf27d9d9d180a42 343 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 7 339 8.1E-150 T 17-10-2018 IPR013399 CRISPR-associated protein Csy3 FORC55_1919 5a22f07ab00602d81bf27d9d9d180a42 343 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 7 342 5.4E-137 T 17-10-2018 IPR013399 CRISPR-associated protein Csy3 FORC55_1191 7b83b11290f294aa57a5f37dc9faeb46 396 Pfam PF11301 Protein of unknown function (DUF3103) 42 395 8.4E-183 T 17-10-2018 IPR021452 Protein of unknown function DUF3103 FORC55_1902 35fa5baaafeff3cbb8fac3781742645d 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.4E-5 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1902 35fa5baaafeff3cbb8fac3781742645d 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 5.3E-9 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site FORC55_1079 812a18fb7ef541d49cbb6213e1a88bf8 285 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 25 202 1.6E-27 T 17-10-2018 IPR010183 Bacteriophage lambda, Bet FORC55_1079 812a18fb7ef541d49cbb6213e1a88bf8 285 Pfam PF03837 RecT family 20 207 1.6E-22 T 17-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 FORC55_3592 0b966ee4ffd4adaa2b8a076df848183d 155 Pfam PF07670 Nucleoside recognition 31 124 9.2E-7 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 FORC55_3431 72ff53618e7c887aee9e5be42394877f 84 Gene3D G3DSA:2.60.120.380 7 81 1.4E-22 T 17-10-2018 FORC55_2808 77381cb9889585ad7782b993c61874ed 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 6.1E-54 T 17-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 FORC55_0274 768eb85ad153898030a78b7bda330ecc 161 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 9.2E-28 T 17-10-2018 IPR012659 Conserved hypothetical protein CHP02444 FORC55_0274 768eb85ad153898030a78b7bda330ecc 161 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 1.7E-34 T 17-10-2018 IPR012659 Conserved hypothetical protein CHP02444 FORC55_2851 3f265d0417fdfe8d529b1360cf2d74ae 162 Pfam PF14316 Domain of unknown function (DUF4381) 10 146 5.6E-37 T 17-10-2018 IPR025489 Protein of unknown function (DUF4381 FORC55_2931 12353127d28b7e2adff9fd1950f79168 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.9E-32 T 17-10-2018 IPR008878 Transposase IS66, Orf2 FORC55_0689 f16ec54d9ce02859df5ffbcdd4e32d08 354 Pfam PF01594 AI-2E family transporter 20 345 1.9E-79 T 17-10-2018 IPR002549 Transmembrane protein TqsA-like FORC55_0699 bf7bc4102cf01a39490e622d73440cc4 224 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 175 2.7E-35 T 17-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 FORC55_0699 bf7bc4102cf01a39490e622d73440cc4 224 SUPERFAMILY SSF55166 17 174 8.63E-21 T 17-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 FORC55_0699 bf7bc4102cf01a39490e622d73440cc4 224 Gene3D G3DSA:3.30.1380.10 3 194 7.4E-35 T 17-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 FORC55_1371 3cd89041184e9bdf233fa85a8daae8a5 205 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 1 191 3.6E-50 T 17-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain FORC55_3101 e5a7f77e1106e0ab9719afd0a5d4e068 131 Pfam PF11948 Protein of unknown function (DUF3465) 11 131 3.5E-60 T 17-10-2018 IPR021856 Protein of unknown function DUF3465 FORC55_1739 4af5de1d5feca3b3146b427fd9fd5498 423 Gene3D G3DSA:2.40.160.60 26 423 2.9E-118 T 17-10-2018 FORC55_1739 4af5de1d5feca3b3146b427fd9fd5498 423 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 423 8.2E-140 T 17-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC55_1739 4af5de1d5feca3b3146b427fd9fd5498 423 SUPERFAMILY SSF56935 26 423 2.93E-96 T 17-10-2018 FORC55_1014 221cf6b4194e89ec36e8465e1483b300 67 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 3.2E-23 T 17-10-2018 IPR021677 Protein of unknown function DUF2986 FORC55_0693 69383ad28576cc31e333b5e8a327472b 155 Pfam PF00578 AhpC/TSA family 7 134 2.9E-34 T 17-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 FORC55_0693 69383ad28576cc31e333b5e8a327472b 155 SUPERFAMILY SSF52833 1 152 2.19E-45 T 17-10-2018 IPR036249 Thioredoxin-like superfamily FORC55_0693 69383ad28576cc31e333b5e8a327472b 155 Gene3D G3DSA:3.40.30.10 3 154 5.3E-46 T 17-10-2018 FORC55_1322 cd00f43d1309ed17abe0840e57bc2958 850 Pfam PF02470 MlaD protein 719 788 1.9E-7 T 17-10-2018 IPR003399 Mce/MlaD FORC55_1322 cd00f43d1309ed17abe0840e57bc2958 850 Pfam PF02470 MlaD protein 612 678 1.7E-6 T 17-10-2018 IPR003399 Mce/MlaD FORC55_1322 cd00f43d1309ed17abe0840e57bc2958 850 Pfam PF02470 MlaD protein 370 431 1.7E-9 T 17-10-2018 IPR003399 Mce/MlaD FORC55_1322 cd00f43d1309ed17abe0840e57bc2958 850 Pfam PF02470 MlaD protein 18 109 3.4E-12 T 17-10-2018 IPR003399 Mce/MlaD FORC55_1322 cd00f43d1309ed17abe0840e57bc2958 850 Pfam PF02470 MlaD protein 256 346 2.0E-8 T 17-10-2018 IPR003399 Mce/MlaD FORC55_1322 cd00f43d1309ed17abe0840e57bc2958 850 Pfam PF02470 MlaD protein 135 195 3.8E-8 T 17-10-2018 IPR003399 Mce/MlaD FORC55_2929 7e2fbf2cbed7ff2232f6c8598be26874 635 SUPERFAMILY SSF48452 252 360 4.17E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_1044 60ee22ea0ecbf85207984a60d9e889ec 273 Pfam PF02698 DUF218 domain 80 242 5.4E-29 T 17-10-2018 IPR003848 Domain of unknown function DUF218 FORC55_0770 2cdceb87b8b4e5097ef65f9928d7e0bb 76 Pfam PF09012 FeoC like transcriptional regulator 2 49 3.0E-11 T 17-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC FORC55_0770 2cdceb87b8b4e5097ef65f9928d7e0bb 76 SUPERFAMILY SSF46785 2 50 4.49E-9 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily FORC55_0026 c14a406e795320c4917c50f7690506d6 263 Pfam PF07070 SpoOM protein 4 219 4.1E-78 T 17-10-2018 IPR009776 Sporulation stage 0, protein M FORC55_1113 b0f7ef790c34bfe19b8aca2666843437 107 Gene3D G3DSA:1.20.1440.220 2 107 3.9E-50 T 17-10-2018 FORC55_3206 736caccbe2532877d46a456b1e8cbcb0 127 Pfam PF11782 Protein of unknown function (DUF3319) 1 88 7.0E-44 T 17-10-2018 IPR021753 Protein of unknown function DUF3319 FORC55_0067 083bd498684949c6cda21c355d8591f5 510 Pfam PF02646 RmuC family 181 477 3.0E-105 T 17-10-2018 IPR003798 DNA recombination RmuC FORC55_2089 a2800b47a55899d081ba7416b6ee51ea 62 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 1 51 6.8E-14 T 17-10-2018 IPR009241 Toxin HigB-like FORC55_3178 5cefa83bc04257583c47f3852c9be520 165 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 3.3E-39 T 17-10-2018 IPR009476 Protein of unknown function DUF1097 FORC55_0213 0923702e174cd72a7232f524290489a5 139 Gene3D G3DSA:3.30.70.1070 58 138 1.5E-27 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_0213 0923702e174cd72a7232f524290489a5 139 SUPERFAMILY SSF110997 64 135 2.88E-17 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 FORC55_0213 0923702e174cd72a7232f524290489a5 139 Pfam PF05036 Sporulation related domain 65 134 4.7E-14 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 FORC55_1509 883c33e531415598d91f6eb491c7c49a 443 PIRSF PIRSF006351 4 433 1.2E-146 T 17-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 FORC55_1509 883c33e531415598d91f6eb491c7c49a 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 5.1E-113 T 17-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 FORC55_1509 883c33e531415598d91f6eb491c7c49a 443 Pfam PF02378 Phosphotransferase system, EIIC 32 351 6.0E-67 T 17-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 FORC55_2611 ecdda31f3ab7e9a65b9b6eee9ee58856 99 Pfam PF12305 Protein of unknown function (DUF3630) 5 97 6.6E-36 T 17-10-2018 IPR022080 Protein of unknown function DUF3630 FORC55_2943 df8fe90272aa8672ecaa758a42166787 174 SUPERFAMILY SSF56300 15 161 4.51E-5 T 17-10-2018 FORC55_3293 9878b9ceeec09e891a1e89c475865acb 148 Pfam PF04945 YHS domain 38 83 2.3E-15 T 17-10-2018 IPR007029 YHS domain FORC55_1472 35335d7d57550f3f0b917ba7f2511bcb 65 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 2.9E-22 T 17-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM FORC55_0115 abcf691df3a80088e8e8040db40f1b33 109 Gene3D G3DSA:2.40.50.660 32 108 1.9E-7 T 17-10-2018 FORC55_0115 abcf691df3a80088e8e8040db40f1b33 109 Pfam PF10694 Protein of unknown function (DUF2500) 4 105 2.6E-25 T 17-10-2018 IPR019635 Protein of unknown function DUF2500 FORC55_1039 33b4b2a42bc79db5742f54a852d202ce 229 Pfam PF09335 SNARE associated Golgi protein 65 181 6.7E-24 T 17-10-2018 IPR032816 SNARE associated Golgi protein FORC55_0628 5338c8091d0e14f588ddba40a2b699f6 419 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 401 5.5E-153 T 17-10-2018 IPR020010 Conserved hypothetical protein CHP03503 FORC55_0791 15d6facefd2c8a2d098911eae83d05a5 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 3.5E-16 T 17-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 FORC55_0791 15d6facefd2c8a2d098911eae83d05a5 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 7.9E-16 T 17-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 FORC55_3089 d1c1fe15fb9689a7793791a07a12cb6c 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 4 101 2.1E-8 T 17-10-2018 IPR009387 Toxin HigB-2 FORC55_3089 d1c1fe15fb9689a7793791a07a12cb6c 110 PIRSF PIRSF039032 1 110 5.3E-44 T 17-10-2018 IPR009387 Toxin HigB-2 FORC55_3111 e3bbbe87bb8aad18892dcb57f72d2b98 204 Pfam PF06042 Nucleotidyltransferase 46 202 7.5E-58 T 17-10-2018 IPR009267 Putative nucleotidyltransferase FORC55_2797 ba555a808813cdd53d98530c3b59b4ce 420 Pfam PF06812 ImpA, N-terminal, type VI secretion system 25 99 2.1E-8 T 17-10-2018 IPR010657 ImpA, N-terminal FORC55_1464 0e3efbc3da9a4dfbbb8f2945f840604f 165 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 21 156 2.2E-15 T 17-10-2018 IPR009936 Protein of unknown function DUF1468 FORC55_3483 22a00ddf8dc6710a8cc2c057a6568d4c 470 Pfam PF03929 PepSY-associated TM region 23 407 3.2E-64 T 17-10-2018 IPR005625 PepSY-associated TM protein FORC55_2913 137368cd4a7b46f8dd64e0e9a9be2320 463 Pfam PF03432 Relaxase/Mobilisation nuclease domain 35 274 5.0E-20 T 17-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 FORC55_2108 cd74f91604fd81ca0a328c65a2db8a56 317 Pfam PF11348 Protein of unknown function (DUF3150) 6 259 7.5E-101 T 17-10-2018 IPR021496 Protein of unknown function DUF3150 FORC55_3087 58a759934d595ebc55d4c4d27ea6ac37 306 Pfam PF13737 Transposase DDE domain 19 129 3.8E-45 T 17-10-2018 IPR025668 Transposase DDE domain FORC55_2520 663ca17f6271e2b4ae2e401b272159b0 189 Pfam PF02397 Bacterial sugar transferase 6 176 1.7E-49 T 17-10-2018 IPR003362 Bacterial sugar transferase FORC55_2917 5b516d4137c5b56b3b599150b9c54830 70 Gene3D G3DSA:3.40.50.300 1 58 3.3E-5 T 17-10-2018 FORC55_0787 2e601f0e842a02f8fcbcebf00585167c 159 Pfam PF10975 Protein of unknown function (DUF2802) 68 134 1.1E-22 T 17-10-2018 IPR021244 Protein of unknown function DUF2802 FORC55_0119 625a664db3f13764f03db6cab3929693 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 8.8E-18 T 17-10-2018 IPR009525 Protein of unknown function DUF1145 FORC55_2843 c3087a15dc8f13fd1591748840a9082a 58 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 1 56 1.7E-28 T 17-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor FORC55_2843 c3087a15dc8f13fd1591748840a9082a 58 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 3 56 1.0E-13 T 17-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor FORC55_1281 6515da1d3c7c4c003226dd3df6b7ba37 179 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 172 5.0E-23 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel FORC55_1542 25b7e22c7d59dd8f31519b6f5595b408 299 Pfam PF13084 Domain of unknown function (DUF3943) 136 245 8.4E-38 T 17-10-2018 IPR025079 Domain of unknown function DUF3943 FORC55_2768 02213a1774e3a341b717321aeaf71f73 209 SUPERFAMILY SSF53474 3 173 3.43E-15 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold FORC55_0979 6a6e1c8b4f72eba2d284df6129624f3c 70 Pfam PF10689 Protein of unknown function (DUF2496) 7 49 1.5E-23 T 17-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related FORC55_1834 563dbcfc5bff79ffe936a8e36a02fcca 236 Gene3D G3DSA:1.25.40.10 49 229 2.9E-5 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 FORC55_3598 3afa52d2c1a20a6bb68ab8096a3a5be1 147 Pfam PF07681 DoxX 17 103 5.6E-24 T 17-10-2018 IPR032808 DoxX family FORC55_3102 2b5e46fa48a66bd79eb7f75b4b27ddda 404 Pfam PF12358 Protein of unknown function (DUF3644) 121 199 7.7E-10 T 17-10-2018 IPR022104 Protein of unknown function DUF3644 FORC55_3083 90eb8c5794e15fc25cf2e65de4dcd3d2 64 Pfam PF12493 Protein of unknown function (DUF3709) 50 64 4.3E-5 T 17-10-2018 IPR022178 Protein of unknown function DUF3709 FORC55_0737 77996da3a1f40fd48c96bf436e353a50 101 Pfam PF08891 YfcL protein 18 98 7.0E-32 T 17-10-2018 IPR014987 Uncharacterised protein family YfcL FORC55_0277 2f9b1ca26bc2bbc68310d6866b61b694 62 Gene3D G3DSA:1.20.1530.20 5 59 3.7E-8 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily FORC55_1261 34deec46bfd84c9a7b9e2bfcda768fde 330 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 320 2.0E-79 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 FORC55_1477 961112f392d00fecf7558c95b6504fac 306 Pfam PF04393 Protein of unknown function (DUF535) 25 294 7.2E-80 T 17-10-2018 IPR007488 Protein of unknown function DUF535 FORC55_0817 31dad5ed72af6b74788dc97596ca6637 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 3.7E-17 T 17-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD FORC55_0948 367b1b8d0079c10b09f8f38a0cbd1747 254 Pfam PF10972 Peptidoglycan-binding protein, CsiV 7 252 2.7E-62 T 17-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV FORC55_0900 0a7f9d2724f8811d0eb5bf8d1a68fdab 220 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 1.7E-28 T 17-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ FORC55_2140 6608e3180216d0bbf28aea2ef9fb1fd8 342 Pfam PF06834 TraU protein 43 339 6.6E-101 T 17-10-2018 IPR009649 TraU FORC55_3549 9ccdfb2c63d0f0ad80e584a7fac02b89 402 Pfam PF12060 Domain of unknown function (DUF3541) 63 285 2.0E-113 T 17-10-2018 IPR021928 Protein of unknown function DUF3541 FORC55_2141 c85610ad0c9cd2a4b19bb9fb7973100d 374 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 74 165 7.1E-22 T 17-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC FORC55_1038 369b07ec985aad38ff25a61d17399b74 103 Pfam PF09413 Putative prokaryotic signal transducing protein 1 68 1.1E-10 T 17-10-2018 IPR018551 Domain of unknown function DUF2007 FORC55_1901 aa04018b2b619725db0bfac7a441a5f3 519 Pfam PF03806 AbgT putative transporter family 19 517 1.2E-219 T 17-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 FORC55_3103 0b718499f5f4a2aefb8407969e346494 92 Pfam PF12493 Protein of unknown function (DUF3709) 49 81 3.9E-22 T 17-10-2018 IPR022178 Protein of unknown function DUF3709 FORC55_1199 416764f91754601d60dab8ffb427dcdf 133 Gene3D G3DSA:3.10.450.40 68 123 3.6E-6 T 17-10-2018 FORC55_2450 33722f6f390e60af5bb5e06ecde14e39 319 SUPERFAMILY SSF64182 5 318 4.71E-41 T 17-10-2018 IPR038763 DHH phosphoesterase superfamily FORC55_1661 e18f6a43f0949fa392281db9c52b665c 179 Pfam PF11086 Protein of unknown function (DUF2878) 4 150 5.7E-32 T 17-10-2018 IPR021306 Protein of unknown function DUF2878 FORC55_0551 c928cab5807f7ccd51181a142e55a2f0 134 Pfam PF11012 Protein of unknown function (DUF2850) 48 125 2.3E-29 T 17-10-2018 IPR021271 Protein of unknown function DUF2850 FORC55_3064 95b2878fbe9e45d7e82b0c45a8adb7a6 105 Gene3D G3DSA:3.30.2310.20 1 99 2.1E-18 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily FORC55_3064 95b2878fbe9e45d7e82b0c45a8adb7a6 105 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 93 3.1E-12 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family FORC55_0698 3b5ac9a70aa3a60080eae210f3dd30b2 70 Pfam PF11446 Protein of unknown function (DUF2897) 5 51 1.2E-18 T 17-10-2018 IPR021550 Protein of unknown function DUF2897 FORC55_0640 f04002572ba98eacfd1ab9ba19e18332 146 Pfam PF04214 Protein of unknown function, DUF 48 117 2.1E-32 T 17-10-2018 IPR007332 Protein of unknown function DUF411 FORC55_2805 add41edd38ea50e17c2f339c383b4b43 86 Pfam PF11216 Protein of unknown function (DUF3012) 55 86 2.4E-18 T 17-10-2018 IPR021379 Protein of unknown function DUF3012 FORC55_2805 add41edd38ea50e17c2f339c383b4b43 86 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 5.0E-19 T 17-10-2018 IPR021379 Protein of unknown function DUF3012 FORC55_1521 ad9844fb47d2c3329f70f3601d511a82 224 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 4.1E-62 T 17-10-2018 IPR021367 Protein of unknown function DUF2982 FORC55_0753 a64203021fc7b85e5c23d089cad91e99 249 Pfam PF08907 Domain of unknown function (DUF1853) 36 219 7.2E-35 T 17-10-2018 IPR015003 Protein of unknown function DUF1853 FORC55_2676 72aaf6da6a1f6f7493d135825128d0da 167 Pfam PF04221 RelB antitoxin 4 70 4.3E-9 T 17-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ FORC55_1227 32f3187f5cd157c383aac5d2bc07f8f9 382 Pfam PF12698 ABC-2 family transporter protein 16 353 5.8E-40 T 17-10-2018 FORC55_1151 2bb03f3b468fd9f88a4be693fa429aff 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 7.8E-37 T 17-10-2018 IPR021284 Protein of unknown function DUF2750 FORC55_2586 7be16e922cd06b9245776cd877543f6e 169 Pfam PF14487 Domain of unknown function (DUF4433) 1 169 2.8E-48 T 17-10-2018 IPR029494 Domain of unknown function DUF4433 FORC55_0492 4cdd3db68a8f2c5c4e77dbbf88d8b5ce 206 Pfam PF03458 UPF0126 domain 95 165 6.8E-19 T 17-10-2018 IPR005115 Uncharacterised domain UPF0126 FORC55_0492 4cdd3db68a8f2c5c4e77dbbf88d8b5ce 206 Pfam PF03458 UPF0126 domain 8 81 3.7E-22 T 17-10-2018 IPR005115 Uncharacterised domain UPF0126 FORC55_3069 d46768c8f245e99a158035f086575f7f 60 Pfam PF04875 Protein of unknown function, DUF645 2 60 1.9E-39 T 17-10-2018 IPR006959 Protein of unknown function DUF645 FORC55_2706 7f47c24bc76dfceeb2816a8237b6b5d3 267 Pfam PF13503 Domain of unknown function (DUF4123) 16 123 2.1E-6 T 17-10-2018 IPR025391 Domain of unknown function DUF4123 FORC55_1063 7aff9645dc218ee2b2262c0aebdc7e03 254 Pfam PF13708 Domain of unknown function (DUF4942) 73 243 5.8E-22 T 17-10-2018 IPR031339 Domain of unknown function DUF4942 FORC55_1355 ba4f67e59560e93171b8dcbfeb801e1c 306 Pfam PF13737 Transposase DDE domain 19 129 3.8E-45 T 17-10-2018 IPR025668 Transposase DDE domain