AN947_00035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_00035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_00035 SM01049 AN947_00035 AN947_00050 SM00421 helix_turn_helix, Lux Regulon AN947_00065 SM00642 Alpha-amylase domain AN947_00120 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AN947_00120 SM00495 Chitin-binding domain type 3 AN947_00120 SM00636 AN947_00120 AN947_00140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_00140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_00160 SM00014 Acid phosphatase homologues AN947_00205 SM00245 tail specific protease AN947_00220 SM00267 diguanylate cyclase AN947_00225 SM00028 Tetratricopeptide repeats AN947_00250 SM00422 helix_turn_helix, mercury resistance AN947_00260 SM00257 Lysin motif AN947_00275 SM00487 DEAD-like helicases superfamily AN947_00275 SM00490 helicase superfamily c-terminal domain AN947_00305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_00305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_00325 SM00382 ATPases associated with a variety of cellular activities AN947_00330 SM00267 diguanylate cyclase AN947_00360 SM00052 Putative diguanylate phosphodiesterase AN947_00360 SM00267 diguanylate cyclase AN947_00375 SM00422 helix_turn_helix, mercury resistance AN947_00450 SM00450 Rhodanese Homology Domain AN947_00455 SM00052 Putative diguanylate phosphodiesterase AN947_00530 SM00382 ATPases associated with a variety of cellular activities AN947_00530 SM01086 C-terminal, D2-small domain, of ClpB protein AN947_00535 SM00382 ATPases associated with a variety of cellular activities AN947_00590 SM00382 ATPases associated with a variety of cellular activities AN947_00610 SM00354 helix_turn _helix lactose operon repressor AN947_00630 SM00100 Cyclic nucleotide-monophosphate binding domain AN947_00655 SM00091 PAS domain AN947_00655 SM00387 Histidine kinase-like ATPases AN947_00655 SM00388 His Kinase A (phosphoacceptor) domain AN947_00660 SM00382 ATPases associated with a variety of cellular activities AN947_00660 SM00448 cheY-homologous receiver domain AN947_00765 SM00267 diguanylate cyclase AN947_00770 SM00357 Cold shock protein domain AN947_00785 SM00028 Tetratricopeptide repeats AN947_00810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_00810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_00840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN947_00840 SM00382 ATPases associated with a variety of cellular activities AN947_00850 SM00357 Cold shock protein domain AN947_00870 SM00448 cheY-homologous receiver domain AN947_00910 SM01240 AN947_00910 AN947_00935 SM01321 AN947_00935 AN947_00940 SM00487 DEAD-like helicases superfamily AN947_00940 SM00490 helicase superfamily c-terminal domain AN947_00965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_00970 SM00387 Histidine kinase-like ATPases AN947_01000 SM00267 diguanylate cyclase AN947_01010 SM00458 Ricin-type beta-trefoil AN947_01015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_01015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_01030 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AN947_01060 SM00382 ATPases associated with a variety of cellular activities AN947_01065 SM00342 helix_turn_helix, arabinose operon control protein AN947_01095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_01095 SM00387 Histidine kinase-like ATPases AN947_01095 SM00388 His Kinase A (phosphoacceptor) domain AN947_01100 SM00448 cheY-homologous receiver domain AN947_01100 SM00862 Transcriptional regulatory protein, C terminal AN947_01115 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AN947_01125 SM01007 Class II Aldolase and Adducin N-terminal domain AN947_01140 SM00420 helix_turn_helix, Deoxyribose operon repressor AN947_01140 SM01134 AN947_01140 AN947_01155 SM00642 Alpha-amylase domain AN947_01180 SM00448 cheY-homologous receiver domain AN947_01180 SM00862 Transcriptional regulatory protein, C terminal AN947_01185 SM00387 Histidine kinase-like ATPases AN947_01185 SM00388 His Kinase A (phosphoacceptor) domain AN947_01210 SM00422 helix_turn_helix, mercury resistance AN947_01220 SM00342 helix_turn_helix, arabinose operon control protein AN947_01230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_01230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_01240 SM00936 Penicillin-binding protein 5, C-terminal domain AN947_01255 SM01057 Eukaryotic-type carbonic anhydrase AN947_01260 SM01321 AN947_01260 AN947_01280 SM00530 Helix-turn-helix XRE-family like proteins AN947_01320 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AN947_01405 SM00507 HNH nucleases AN947_01725 SM00530 Helix-turn-helix XRE-family like proteins AN947_01990 SM01321 AN947_01990 AN947_02095 SM00354 helix_turn _helix lactose operon repressor AN947_02110 SM00387 Histidine kinase-like ATPases AN947_02110 SM00448 cheY-homologous receiver domain AN947_02130 SM00833 Cobalamin synthesis protein cobW C-terminal domain AN947_02145 SM00890 Domain of unknown function AN947_02155 SM00448 cheY-homologous receiver domain AN947_02155 SM00862 Transcriptional regulatory protein, C terminal AN947_02175 SM00052 Putative diguanylate phosphodiesterase AN947_02190 SM00867 YceI-like domain AN947_02195 SM00116 Domain in cystathionine beta-synthase and other proteins. AN947_02230 SM00782 PhnA Zinc-Ribbon AN947_02265 SM00062 Bacterial periplasmic substrate-binding proteins AN947_02265 SM00267 diguanylate cyclase AN947_02285 SM00267 diguanylate cyclase AN947_02300 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AN947_02300 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AN947_02310 SM00387 Histidine kinase-like ATPases AN947_02310 SM00388 His Kinase A (phosphoacceptor) domain AN947_02315 SM00448 cheY-homologous receiver domain AN947_02315 SM00862 Transcriptional regulatory protein, C terminal AN947_02365 SM00530 Helix-turn-helix XRE-family like proteins AN947_02390 SM00881 CoA binding domain AN947_02455 SM00382 ATPases associated with a variety of cellular activities AN947_02505 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN947_02505 SM00866 AN947_02505 AN947_02515 SM00382 ATPases associated with a variety of cellular activities AN947_02580 SM00852 Probable molybdopterin binding domain AN947_02595 SM00450 Rhodanese Homology Domain AN947_02615 SM00861 Transketolase, pyrimidine binding domain AN947_02700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN947_02710 SM00450 Rhodanese Homology Domain AN947_02720 SM00563 Phosphate acyltransferases AN947_02760 SM00354 helix_turn _helix lactose operon repressor AN947_02780 SM00091 PAS domain AN947_02780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_02800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_02800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_02840 SM00354 helix_turn _helix lactose operon repressor AN947_02845 SM00421 helix_turn_helix, Lux Regulon AN947_02845 SM00448 cheY-homologous receiver domain AN947_02850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_02850 SM00387 Histidine kinase-like ATPases AN947_02865 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN947_02885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_02890 SM00421 helix_turn_helix, Lux Regulon AN947_02890 SM00448 cheY-homologous receiver domain AN947_02895 SM00387 Histidine kinase-like ATPases AN947_02915 SM00382 ATPases associated with a variety of cellular activities AN947_02935 SM00822 AN947_02935 AN947_02970 SM00530 Helix-turn-helix XRE-family like proteins AN947_03025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN947_03025 SM00267 diguanylate cyclase AN947_03035 SM00495 Chitin-binding domain type 3 AN947_03035 SM00636 AN947_03035 AN947_03050 SM00448 cheY-homologous receiver domain AN947_03055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_03055 SM00387 Histidine kinase-like ATPases AN947_03055 SM00388 His Kinase A (phosphoacceptor) domain AN947_03075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_03075 SM00387 Histidine kinase-like ATPases AN947_03075 SM00388 His Kinase A (phosphoacceptor) domain AN947_03075 SM00448 cheY-homologous receiver domain AN947_03085 SM00851 MGS-like domain AN947_03120 SM00387 Histidine kinase-like ATPases AN947_03125 SM00989 AN947_03125 AN947_03145 SM00382 ATPases associated with a variety of cellular activities AN947_03205 SM00387 Histidine kinase-like ATPases AN947_03205 SM00388 His Kinase A (phosphoacceptor) domain AN947_03205 SM00448 cheY-homologous receiver domain AN947_03330 SM00062 Bacterial periplasmic substrate-binding proteins AN947_03330 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AN947_03335 SM00382 ATPases associated with a variety of cellular activities AN947_03345 SM00327 von Willebrand factor (vWF) type A domain AN947_03350 SM00382 ATPases associated with a variety of cellular activities AN947_03375 SM00487 DEAD-like helicases superfamily AN947_03375 SM00490 helicase superfamily c-terminal domain AN947_03395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_03395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_03415 SM00796 Allophanate hydrolase subunit 1 AN947_03420 SM00797 Allophanate hydrolase subunit 2 AN947_03430 SM00984 UDP binding domain AN947_03440 SM00382 ATPases associated with a variety of cellular activities AN947_03455 SM00052 Putative diguanylate phosphodiesterase AN947_03455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN947_03455 SM00267 diguanylate cyclase AN947_03470 SM00271 DnaJ molecular chaperone homology domain AN947_03505 SM00857 Resolvase, N terminal domain AN947_03540 SM00020 Trypsin-like serine protease AN947_03545 SM00487 DEAD-like helicases superfamily AN947_03545 SM00490 helicase superfamily c-terminal domain AN947_03550 SM00357 Cold shock protein domain AN947_03550 SM00955 AN947_03550 AN947_03605 SM00924 MgtE intracellular N domain AN947_03610 SM00883 Chaperonin 10 Kd subunit AN947_03695 SM01091 Transporter associated domain AN947_03715 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN947_03735 SM00267 diguanylate cyclase AN947_03745 SM00448 cheY-homologous receiver domain AN947_03745 SM00850 LytTr DNA-binding domain AN947_03750 SM00387 Histidine kinase-like ATPases AN947_03770 SM00382 ATPases associated with a variety of cellular activities AN947_03790 SM00642 Alpha-amylase domain AN947_03815 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN947_03815 SM00091 PAS domain AN947_03815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_03845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN947_03915 SM00829 Enoylreductase AN947_03935 SM00421 helix_turn_helix, Lux Regulon AN947_03965 SM00481 DNA polymerase alpha chain like domain AN947_03970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_03985 SM01350 AN947_03985 AN947_03995 SM00849 Metallo-beta-lactamase superfamily AN947_04025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_04040 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_04070 SM00382 ATPases associated with a variety of cellular activities AN947_04100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_04115 SM00342 helix_turn_helix, arabinose operon control protein AN947_04140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_04145 SM00357 Cold shock protein domain AN947_04160 SM00342 helix_turn_helix, arabinose operon control protein AN947_04170 SM00091 PAS domain AN947_04170 SM00267 diguanylate cyclase AN947_04175 SM00420 helix_turn_helix, Deoxyribose operon repressor AN947_04175 SM01134 AN947_04175 AN947_04205 SM00382 ATPases associated with a variety of cellular activities AN947_04220 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AN947_04230 SM00421 helix_turn_helix, Lux Regulon AN947_04240 SM00260 Two component signalling adaptor domain AN947_04240 SM00448 cheY-homologous receiver domain AN947_04245 SM00347 helix_turn_helix multiple antibiotic resistance protein AN947_04250 SM00267 diguanylate cyclase AN947_04270 SM00267 diguanylate cyclase AN947_04270 SM01079 AN947_04270 AN947_04295 SM00267 diguanylate cyclase AN947_04330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_04345 SM00382 ATPases associated with a variety of cellular activities AN947_04355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04410 SM00487 DEAD-like helicases superfamily AN947_04410 SM00490 helicase superfamily c-terminal domain AN947_04435 SM00382 ATPases associated with a variety of cellular activities AN947_04460 SM00342 helix_turn_helix, arabinose operon control protein AN947_04480 SM00347 helix_turn_helix multiple antibiotic resistance protein AN947_04530 SM00342 helix_turn_helix, arabinose operon control protein AN947_04530 SM01009 AlkA N-terminal domain AN947_04550 SM01154 AN947_04550 AN947_04565 SM00671 Sel1-like repeats. AN947_04580 SM00642 Alpha-amylase domain AN947_04590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_04605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_04620 SM00382 ATPases associated with a variety of cellular activities AN947_04630 SM00062 Bacterial periplasmic substrate-binding proteins AN947_04680 SM00849 Metallo-beta-lactamase superfamily AN947_04700 SM00450 Rhodanese Homology Domain AN947_04715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_04760 SM00344 helix_turn_helix ASNC type AN947_04765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_04790 SM00342 helix_turn_helix, arabinose operon control protein AN947_04805 SM00421 helix_turn_helix, Lux Regulon AN947_04825 SM00052 Putative diguanylate phosphodiesterase AN947_04825 SM00267 diguanylate cyclase AN947_04830 SM00382 ATPases associated with a variety of cellular activities AN947_04840 SM00331 Sigma factor PP2C-like phosphatases AN947_04840 SM00448 cheY-homologous receiver domain AN947_04850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04855 SM00448 cheY-homologous receiver domain AN947_04865 SM00138 Methyltransferase, chemotaxis proteins AN947_04870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_04870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_04875 SM00260 Two component signalling adaptor domain AN947_04880 SM00260 Two component signalling adaptor domain AN947_04885 SM00073 Histidine Phosphotransfer domain AN947_04885 SM00260 Two component signalling adaptor domain AN947_04885 SM00387 Histidine kinase-like ATPases AN947_04885 SM01231 AN947_04885 AN947_04890 SM00448 cheY-homologous receiver domain AN947_04915 SM00382 ATPases associated with a variety of cellular activities AN947_04925 SM00387 Histidine kinase-like ATPases AN947_04925 SM00388 His Kinase A (phosphoacceptor) domain AN947_04930 SM00448 cheY-homologous receiver domain AN947_04930 SM00862 Transcriptional regulatory protein, C terminal AN947_04940 SM00822 AN947_04940 AN947_04945 SM01236 AN947_04945 AN947_04970 SM00470 ParB-like nuclease domain AN947_05000 SM01234 AN947_05000 AN947_05015 SM00382 ATPases associated with a variety of cellular activities AN947_05025 SM00062 Bacterial periplasmic substrate-binding proteins AN947_05030 SM00382 ATPases associated with a variety of cellular activities AN947_05030 SM00760 Bacterial dnaA protein helix-turn-helix domain AN947_05035 SM00480 DNA polymerase III beta subunit AN947_05045 SM00387 Histidine kinase-like ATPases AN947_05045 SM00433 TopoisomeraseII AN947_05100 SM00829 Enoylreductase AN947_05130 SM00382 ATPases associated with a variety of cellular activities AN947_05135 SM00563 Phosphate acyltransferases AN947_05205 SM00257 Lysin motif AN947_05230 SM01001 AIR carboxylase AN947_05325 SM00876 Biotin and Thiamin Synthesis associated domain AN947_05350 SM00344 helix_turn_helix ASNC type AN947_05355 SM00052 Putative diguanylate phosphodiesterase AN947_05355 SM00091 PAS domain AN947_05355 SM00267 diguanylate cyclase AN947_05460 SM00563 Phosphate acyltransferases AN947_05485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN947_05485 SM00091 PAS domain AN947_05485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_05495 SM00450 Rhodanese Homology Domain AN947_05510 SM01004 Delta-aminolevulinic acid dehydratase AN947_05520 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AN947_05520 SM00474 3'-5' exonuclease AN947_05520 SM00475 5'-3' exonuclease AN947_05520 SM00482 DNA polymerase A domain AN947_05550 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_05585 SM01219 AN947_05585 AN947_05620 SM00052 Putative diguanylate phosphodiesterase AN947_05620 SM00267 diguanylate cyclase AN947_05620 SM00897 FIST N domain AN947_05620 SM01204 AN947_05620 AN947_05625 SM01144 AN947_05625 AN947_05705 SM00382 ATPases associated with a variety of cellular activities AN947_05755 SM00360 RNA recognition motif AN947_05860 SM00382 ATPases associated with a variety of cellular activities AN947_05895 SM00530 Helix-turn-helix XRE-family like proteins AN947_05975 SM00342 helix_turn_helix, arabinose operon control protein AN947_05990 SM00341 Helicase and RNase D C-terminal AN947_05990 SM00487 DEAD-like helicases superfamily AN947_05990 SM00490 helicase superfamily c-terminal domain AN947_05990 SM00956 AN947_05990 AN947_06005 SM00382 ATPases associated with a variety of cellular activities AN947_06015 SM00382 ATPases associated with a variety of cellular activities AN947_06090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_06090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_06090 SM01049 AN947_06090 AN947_06115 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AN947_06115 SM01232 AN947_06115 AN947_06340 SM00984 UDP binding domain AN947_06355 SM00849 Metallo-beta-lactamase superfamily AN947_06355 SM01027 Beta-Casp domain AN947_06395 SM00411 bacterial (prokaryotic) histone like domain AN947_06405 SM01209 AN947_06405 AN947_06405 SM01210 AN947_06405 AN947_06410 SM00798 AICARFT/IMPCHase bienzyme AN947_06410 SM00851 MGS-like domain AN947_06420 SM00422 helix_turn_helix, mercury resistance AN947_06425 SM00862 Transcriptional regulatory protein, C terminal AN947_06440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_06440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_06440 SM01049 AN947_06440 AN947_06480 SM00354 helix_turn _helix lactose operon repressor AN947_06500 SM00878 Biotin carboxylase C-terminal domain AN947_06520 SM00479 AN947_06520 AN947_06540 SM00387 Histidine kinase-like ATPases AN947_06540 SM00388 His Kinase A (phosphoacceptor) domain AN947_06540 SM00448 cheY-homologous receiver domain AN947_06550 SM00487 DEAD-like helicases superfamily AN947_06550 SM00490 helicase superfamily c-terminal domain AN947_06615 SM00155 Phospholipase D. Active site motifs. AN947_06675 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AN947_06675 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AN947_06680 SM00649 Ribosomal protein L11/L12 AN947_06705 SM00663 RNA polymerase I subunit A N-terminus AN947_06765 SM00479 AN947_06765 AN947_06820 SM00257 Lysin motif AN947_06820 SM00646 AN947_06820 AN947_06825 SM00853 MutL C terminal dimerisation domain AN947_06825 SM01340 AN947_06825 AN947_06845 SM00244 prohibitin homologues AN947_06850 SM00244 prohibitin homologues AN947_06865 SM00320 WD40 repeats AN947_06905 SM00838 Elongation factor G C-terminus AN947_06905 SM00889 Elongation factor G, domain IV AN947_06950 SM00382 ATPases associated with a variety of cellular activities AN947_06955 SM01005 Alanine racemase, C-terminal domain AN947_07060 SM01018 B12 binding domain AN947_07090 SM00421 helix_turn_helix, Lux Regulon AN947_07100 SM00052 Putative diguanylate phosphodiesterase AN947_07100 SM00267 diguanylate cyclase AN947_07120 SM00965 Secretin and TonB N terminus short domain AN947_07130 SM00028 Tetratricopeptide repeats AN947_07135 SM00382 ATPases associated with a variety of cellular activities AN947_07325 SM00650 Ribosomal RNA adenine dimethylases AN947_07345 SM00271 DnaJ molecular chaperone homology domain AN947_07375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_07375 SM01049 AN947_07375 AN947_07410 SM00478 endonuclease III AN947_07410 SM00525 AN947_07410 AN947_07425 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_07440 SM01152 AN947_07440 AN947_07460 SM00382 ATPases associated with a variety of cellular activities AN947_07470 SM00421 helix_turn_helix, Lux Regulon AN947_07475 SM00363 S4 RNA-binding domain AN947_07480 SM00732 Likely ribonuclease with RNase H fold. AN947_07505 SM00731 SprT homologues. AN947_07535 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN947_07580 SM00420 helix_turn_helix, Deoxyribose operon repressor AN947_07580 SM01134 AN947_07580 AN947_07595 SM00563 Phosphate acyltransferases AN947_07710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_07715 SM00342 helix_turn_helix, arabinose operon control protein AN947_07720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_07720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_07745 SM00400 zinc finger AN947_07745 SM00493 AN947_07745 AN947_07745 SM00766 DNA primase DnaG DnaB-binding AN947_07770 SM01207 AN947_07770 AN947_07775 SM00905 Dihydroneopterin aldolase AN947_07820 SM00257 Lysin motif AN947_07830 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AN947_07830 SM00534 ATPase domain of DNA mismatch repair MUTS family AN947_07855 SM00382 ATPases associated with a variety of cellular activities AN947_07865 SM00382 ATPases associated with a variety of cellular activities AN947_07875 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AN947_07950 SM00829 Enoylreductase AN947_07975 SM01091 Transporter associated domain AN947_07985 SM00382 ATPases associated with a variety of cellular activities AN947_07985 SM00962 SRP54-type protein, GTPase domain AN947_07985 SM00963 SRP54-type protein, helical bundle domain AN947_08010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN947_08015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN947_08070 SM00749 bacterial OsmY and nodulation domain AN947_08115 SM00382 ATPases associated with a variety of cellular activities AN947_08165 SM00487 DEAD-like helicases superfamily AN947_08165 SM00490 helicase superfamily c-terminal domain AN947_08165 SM00847 Helicase associated domain (HA2) Add an annotation AN947_08190 SM00938 Nitrogen regulatory protein P-II AN947_08210 SM00382 ATPases associated with a variety of cellular activities AN947_08220 SM01068 Putative carbohydrate binding domain AN947_08240 SM00382 ATPases associated with a variety of cellular activities AN947_08245 SM00382 ATPases associated with a variety of cellular activities AN947_08270 SM00091 PAS domain AN947_08270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_08270 SM00387 Histidine kinase-like ATPases AN947_08270 SM00388 His Kinase A (phosphoacceptor) domain AN947_08270 SM00448 cheY-homologous receiver domain AN947_08320 SM00363 S4 RNA-binding domain AN947_08340 SM01103 AN947_08340 AN947_08350 SM00382 ATPases associated with a variety of cellular activities AN947_08385 SM00316 Ribosomal protein S1-like RNA-binding domain AN947_08385 SM00322 K homology RNA-binding domain AN947_08405 SM01387 AN947_08405 AN947_08410 SM00316 Ribosomal protein S1-like RNA-binding domain AN947_08410 SM00322 K homology RNA-binding domain AN947_08415 SM00028 Tetratricopeptide repeats AN947_08420 SM00347 helix_turn_helix multiple antibiotic resistance protein AN947_08440 SM00052 Putative diguanylate phosphodiesterase AN947_08440 SM00091 PAS domain AN947_08440 SM00267 diguanylate cyclase AN947_08465 SM00052 Putative diguanylate phosphodiesterase AN947_08465 SM00267 diguanylate cyclase AN947_08525 SM00479 AN947_08525 AN947_08585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_08605 SM00530 Helix-turn-helix XRE-family like proteins AN947_08735 SM00382 ATPases associated with a variety of cellular activities AN947_08755 SM00327 von Willebrand factor (vWF) type A domain AN947_08770 SM00778 Zinc-binding domain of primase-helicase AN947_08780 SM00267 diguanylate cyclase AN947_08780 SM00448 cheY-homologous receiver domain AN947_08785 SM00073 Histidine Phosphotransfer domain AN947_08785 SM00091 PAS domain AN947_08785 SM00387 Histidine kinase-like ATPases AN947_08785 SM00388 His Kinase A (phosphoacceptor) domain AN947_08785 SM00448 cheY-homologous receiver domain AN947_08785 SM01079 AN947_08785 AN947_08840 SM00530 Helix-turn-helix XRE-family like proteins AN947_08850 SM00487 DEAD-like helicases superfamily AN947_08850 SM00490 helicase superfamily c-terminal domain AN947_08865 SM00937 AN947_08865 AN947_08875 SM00382 ATPases associated with a variety of cellular activities AN947_08890 SM00927 DNA mismatch repair enzyme MutH AN947_08905 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AN947_08935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN947_08950 SM00904 Riboflavin kinase AN947_09005 SM00448 cheY-homologous receiver domain AN947_09005 SM00850 LytTr DNA-binding domain AN947_09020 SM00830 Chorismate mutase type II AN947_09030 SM00382 ATPases associated with a variety of cellular activities AN947_09050 SM00052 Putative diguanylate phosphodiesterase AN947_09050 SM00267 diguanylate cyclase AN947_09060 SM00830 Chorismate mutase type II AN947_09075 SM00363 S4 RNA-binding domain AN947_09085 SM00382 ATPases associated with a variety of cellular activities AN947_09085 SM01086 C-terminal, D2-small domain, of ClpB protein AN947_09145 SM00448 cheY-homologous receiver domain AN947_09145 SM00862 Transcriptional regulatory protein, C terminal AN947_09150 SM00091 PAS domain AN947_09150 SM00387 Histidine kinase-like ATPases AN947_09150 SM00388 His Kinase A (phosphoacceptor) domain AN947_09180 SM00382 ATPases associated with a variety of cellular activities AN947_09220 SM00116 Domain in cystathionine beta-synthase and other proteins. AN947_09240 SM01323 AN947_09240 AN947_09285 SM00271 DnaJ molecular chaperone homology domain AN947_09310 SM00562 AN947_09310 AN947_09320 SM00530 Helix-turn-helix XRE-family like proteins AN947_09340 SM00564 beta-propeller repeat AN947_09345 SM00382 ATPases associated with a variety of cellular activities AN947_09365 SM00116 Domain in cystathionine beta-synthase and other proteins. AN947_09365 SM01240 AN947_09365 AN947_09375 SM00495 Chitin-binding domain type 3 AN947_09425 SM00382 ATPases associated with a variety of cellular activities AN947_09440 SM00849 Metallo-beta-lactamase superfamily AN947_09470 SM00448 cheY-homologous receiver domain AN947_09475 SM00091 PAS domain AN947_09475 SM00387 Histidine kinase-like ATPases AN947_09500 SM00764 Citrate lyase ligase C-terminal domain AN947_09575 SM00487 DEAD-like helicases superfamily AN947_09575 SM00490 helicase superfamily c-terminal domain AN947_09585 SM00530 Helix-turn-helix XRE-family like proteins AN947_09620 SM00060 Fibronectin type 3 domain AN947_09625 SM00247 Beta/gamma crystallins AN947_09640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_09645 SM00862 Transcriptional regulatory protein, C terminal AN947_09705 SM00342 helix_turn_helix, arabinose operon control protein AN947_09740 SM01276 AN947_09740 AN947_09795 SM00271 DnaJ molecular chaperone homology domain AN947_09845 SM00062 Bacterial periplasmic substrate-binding proteins AN947_09855 SM01211 AN947_09855 AN947_09860 SM01321 AN947_09860 AN947_09945 SM00861 Transketolase, pyrimidine binding domain AN947_09970 SM00981 AN947_09970 AN947_09990 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AN947_09990 SM00475 5'-3' exonuclease AN947_10000 SM00267 diguanylate cyclase AN947_10005 SM00028 Tetratricopeptide repeats AN947_10035 SM00382 ATPases associated with a variety of cellular activities AN947_10035 SM00930 AN947_10035 AN947_10045 SM00354 helix_turn _helix lactose operon repressor AN947_10055 SM00642 Alpha-amylase domain AN947_10090 SM00226 Low molecular weight phosphatase family AN947_10100 SM00984 UDP binding domain AN947_10155 SM00710 Parallel beta-helix repeats AN947_10240 SM00936 Penicillin-binding protein 5, C-terminal domain AN947_10295 SM00116 Domain in cystathionine beta-synthase and other proteins. AN947_10295 SM01091 Transporter associated domain AN947_10310 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_10350 SM00771 ZipA, C-terminal domain (FtsZ-binding) AN947_10355 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN947_10355 SM00292 breast cancer carboxy-terminal domain AN947_10355 SM00532 Ligase N family AN947_10370 SM00422 helix_turn_helix, mercury resistance AN947_10380 SM00244 prohibitin homologues AN947_10415 SM00862 Transcriptional regulatory protein, C terminal AN947_10420 SM00387 Histidine kinase-like ATPases AN947_10440 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AN947_10440 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AN947_10515 SM00479 AN947_10515 AN947_10540 SM00478 endonuclease III AN947_10540 SM00525 AN947_10540 AN947_10550 SM00900 AN947_10550 AN947_10580 SM00487 DEAD-like helicases superfamily AN947_10580 SM00490 helicase superfamily c-terminal domain AN947_10590 SM00382 ATPases associated with a variety of cellular activities AN947_10590 SM00448 cheY-homologous receiver domain AN947_10605 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_10610 SM00852 Probable molybdopterin binding domain AN947_10630 SM00267 diguanylate cyclase AN947_10635 SM00116 Domain in cystathionine beta-synthase and other proteins. AN947_10690 SM00226 Low molecular weight phosphatase family AN947_10740 SM00448 cheY-homologous receiver domain AN947_10760 SM00382 ATPases associated with a variety of cellular activities AN947_10770 SM00493 AN947_10770 AN947_10800 SM00344 helix_turn_helix ASNC type AN947_10825 SM00062 Bacterial periplasmic substrate-binding proteins AN947_10825 SM00267 diguanylate cyclase AN947_10830 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AN947_10835 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN947_10850 SM00495 Chitin-binding domain type 3 AN947_10850 SM00636 AN947_10850 AN947_10865 SM00342 helix_turn_helix, arabinose operon control protein AN947_10890 SM00448 cheY-homologous receiver domain AN947_10895 SM00448 cheY-homologous receiver domain AN947_10905 SM00387 Histidine kinase-like ATPases AN947_10905 SM00388 His Kinase A (phosphoacceptor) domain AN947_10910 SM00387 Histidine kinase-like ATPases AN947_10915 SM00052 Putative diguanylate phosphodiesterase AN947_10915 SM00448 cheY-homologous receiver domain AN947_10920 SM00448 cheY-homologous receiver domain AN947_10925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_10925 SM00387 Histidine kinase-like ATPases AN947_10950 SM00382 ATPases associated with a variety of cellular activities AN947_10955 SM00382 ATPases associated with a variety of cellular activities AN947_10995 SM00382 ATPases associated with a variety of cellular activities AN947_11000 SM00267 diguanylate cyclase AN947_11020 SM00382 ATPases associated with a variety of cellular activities AN947_11035 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_11035 SM00876 Biotin and Thiamin Synthesis associated domain AN947_11125 SM00528 Domain in histone-like proteins of HNS family AN947_11185 SM00357 Cold shock protein domain AN947_11195 SM00382 ATPases associated with a variety of cellular activities AN947_11195 SM01086 C-terminal, D2-small domain, of ClpB protein AN947_11250 SM00448 cheY-homologous receiver domain AN947_11255 SM00387 Histidine kinase-like ATPases AN947_11350 SM00481 DNA polymerase alpha chain like domain AN947_11360 SM00363 S4 RNA-binding domain AN947_11365 SM00382 ATPases associated with a variety of cellular activities AN947_11370 SM00382 ATPases associated with a variety of cellular activities AN947_11390 SM00267 diguanylate cyclase AN947_11405 SM00919 Malic enzyme, NAD binding domain AN947_11405 SM01274 AN947_11405 AN947_11430 SM00271 DnaJ molecular chaperone homology domain AN947_11430 SM00671 Sel1-like repeats. AN947_11460 SM00020 Trypsin-like serine protease AN947_11490 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN947_11490 SM00866 AN947_11490 AN947_11505 SM00841 Elongation factor P, C-terminal AN947_11505 SM01185 AN947_11505 AN947_11515 SM00052 Putative diguanylate phosphodiesterase AN947_11520 SM00486 DNA polymerase type-B family AN947_11525 SM00421 helix_turn_helix, Lux Regulon AN947_11525 SM00448 cheY-homologous receiver domain AN947_11530 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN947_11530 SM00465 GIY-YIG type nucleases (URI domain) AN947_11560 SM00267 diguanylate cyclase AN947_11575 SM00873 B3/4 domain AN947_11575 SM00874 tRNA synthetase B5 domain AN947_11575 SM00896 Ferredoxin-fold anticodon binding domain AN947_11660 SM00855 Phosphoglycerate mutase family AN947_11675 SM00382 ATPases associated with a variety of cellular activities AN947_11690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_11690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_11690 SM01049 AN947_11690 AN947_11705 SM00852 Probable molybdopterin binding domain AN947_11735 SM00434 DNA Topoisomerase IV AN947_11740 SM00450 Rhodanese Homology Domain AN947_11745 SM00342 helix_turn_helix, arabinose operon control protein AN947_11795 SM00849 Metallo-beta-lactamase superfamily AN947_11825 SM00387 Histidine kinase-like ATPases AN947_11825 SM01049 AN947_11825 AN947_11830 SM00421 helix_turn_helix, Lux Regulon AN947_11830 SM00448 cheY-homologous receiver domain AN947_11835 SM00347 helix_turn_helix multiple antibiotic resistance protein AN947_11845 SM00495 Chitin-binding domain type 3 AN947_11875 SM00354 helix_turn _helix lactose operon repressor AN947_11890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_11890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_11895 SM00479 AN947_11895 AN947_11900 SM00100 Cyclic nucleotide-monophosphate binding domain AN947_11900 SM00116 Domain in cystathionine beta-synthase and other proteins. AN947_11915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_11915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_11930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_11930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_11980 SM00091 PAS domain AN947_11980 SM00382 ATPases associated with a variety of cellular activities AN947_12000 SM01005 Alanine racemase, C-terminal domain AN947_12005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_12005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_12015 SM00387 Histidine kinase-like ATPases AN947_12020 SM00448 cheY-homologous receiver domain AN947_12035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_12035 SM00387 Histidine kinase-like ATPases AN947_12035 SM00388 His Kinase A (phosphoacceptor) domain AN947_12040 SM00448 cheY-homologous receiver domain AN947_12040 SM00862 Transcriptional regulatory protein, C terminal AN947_12110 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN947_12110 SM00895 AN947_12110 AN947_12175 SM00448 cheY-homologous receiver domain AN947_12175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_12200 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AN947_12220 SM00382 ATPases associated with a variety of cellular activities AN947_12235 SM00062 Bacterial periplasmic substrate-binding proteins AN947_12260 SM00028 Tetratricopeptide repeats AN947_12260 SM00267 diguanylate cyclase AN947_12285 SM00267 diguanylate cyclase AN947_12305 SM00267 diguanylate cyclase AN947_12305 SM01079 AN947_12305 AN947_12310 SM00479 AN947_12310 AN947_12335 SM00382 ATPases associated with a variety of cellular activities AN947_12335 SM00487 DEAD-like helicases superfamily AN947_12335 SM00490 helicase superfamily c-terminal domain AN947_12335 SM00847 Helicase associated domain (HA2) Add an annotation AN947_12380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_12385 SM00448 cheY-homologous receiver domain AN947_12400 SM00448 cheY-homologous receiver domain AN947_12405 SM00138 Methyltransferase, chemotaxis proteins AN947_12415 SM00448 cheY-homologous receiver domain AN947_12420 SM00260 Two component signalling adaptor domain AN947_12425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_12430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_12430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_12435 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN947_12435 SM00091 PAS domain AN947_12435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_12440 SM00487 DEAD-like helicases superfamily AN947_12440 SM00490 helicase superfamily c-terminal domain AN947_12465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_12465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_12545 SM00382 ATPases associated with a variety of cellular activities AN947_12575 SM00100 Cyclic nucleotide-monophosphate binding domain AN947_12575 SM00419 helix_turn_helix, cAMP Regulatory protein AN947_12625 SM00897 FIST N domain AN947_12625 SM01204 AN947_12625 AN947_12630 SM00387 Histidine kinase-like ATPases AN947_12630 SM00388 His Kinase A (phosphoacceptor) domain AN947_12630 SM00448 cheY-homologous receiver domain AN947_12635 SM00382 ATPases associated with a variety of cellular activities AN947_12645 SM00382 ATPases associated with a variety of cellular activities AN947_12700 SM00530 Helix-turn-helix XRE-family like proteins AN947_12735 SM00530 Helix-turn-helix XRE-family like proteins AN947_12780 SM00530 Helix-turn-helix XRE-family like proteins AN947_12795 SM00530 Helix-turn-helix XRE-family like proteins AN947_12825 SM00530 Helix-turn-helix XRE-family like proteins AN947_12890 SM00382 ATPases associated with a variety of cellular activities AN947_12900 SM00981 AN947_12900 AN947_12935 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AN947_12935 SM00245 tail specific protease AN947_12950 SM00382 ATPases associated with a variety of cellular activities AN947_12970 SM00316 Ribosomal protein S1-like RNA-binding domain AN947_13015 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AN947_13050 SM00382 ATPases associated with a variety of cellular activities AN947_13055 SM00387 Histidine kinase-like ATPases AN947_13055 SM00388 His Kinase A (phosphoacceptor) domain AN947_13060 SM00382 ATPases associated with a variety of cellular activities AN947_13060 SM00448 cheY-homologous receiver domain AN947_13075 SM00382 ATPases associated with a variety of cellular activities AN947_13085 SM00852 Probable molybdopterin binding domain AN947_13115 SM01144 AN947_13115 AN947_13125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_13215 SM00420 helix_turn_helix, Deoxyribose operon repressor AN947_13215 SM01134 AN947_13215 AN947_13235 SM00354 helix_turn _helix lactose operon repressor AN947_13255 SM00849 Metallo-beta-lactamase superfamily AN947_13280 SM00382 ATPases associated with a variety of cellular activities AN947_13315 SM01022 AN947_13315 AN947_13355 SM00248 ankyrin repeats AN947_13360 SM01060 AN947_13360 AN947_13385 SM00822 AN947_13385 AN947_13390 SM00052 Putative diguanylate phosphodiesterase AN947_13395 SM00267 diguanylate cyclase AN947_13460 SM00448 cheY-homologous receiver domain AN947_13465 SM00387 Histidine kinase-like ATPases AN947_13505 SM00028 Tetratricopeptide repeats AN947_13505 SM00386 HAT (Half-A-TPR) repeats AN947_13615 SM00363 S4 RNA-binding domain AN947_13620 SM00487 DEAD-like helicases superfamily AN947_13620 SM00490 helicase superfamily c-terminal domain AN947_13630 SM00448 cheY-homologous receiver domain AN947_13630 SM00862 Transcriptional regulatory protein, C terminal AN947_13635 SM00387 Histidine kinase-like ATPases AN947_13645 SM00052 Putative diguanylate phosphodiesterase AN947_13660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_13660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_13685 SM00020 Trypsin-like serine protease AN947_13695 SM00448 cheY-homologous receiver domain AN947_13700 SM00052 Putative diguanylate phosphodiesterase AN947_13700 SM00421 helix_turn_helix, Lux Regulon AN947_13700 SM00448 cheY-homologous receiver domain AN947_13705 SM00062 Bacterial periplasmic substrate-binding proteins AN947_13705 SM00073 Histidine Phosphotransfer domain AN947_13705 SM00387 Histidine kinase-like ATPases AN947_13705 SM00388 His Kinase A (phosphoacceptor) domain AN947_13705 SM00448 cheY-homologous receiver domain AN947_13705 SM00918 Ligated ion channel L-glutamate- and glycine-binding site AN947_13710 SM00116 Domain in cystathionine beta-synthase and other proteins. AN947_13730 SM00382 ATPases associated with a variety of cellular activities AN947_13765 SM00382 ATPases associated with a variety of cellular activities AN947_13830 SM00382 ATPases associated with a variety of cellular activities AN947_13850 SM00382 ATPases associated with a variety of cellular activities AN947_13855 SM00382 ATPases associated with a variety of cellular activities AN947_13870 SM01131 AN947_13870 AN947_13980 SM00052 Putative diguanylate phosphodiesterase AN947_13980 SM00091 PAS domain AN947_13985 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_13995 SM00344 helix_turn_helix ASNC type AN947_14025 SM00448 cheY-homologous receiver domain AN947_14025 SM00862 Transcriptional regulatory protein, C terminal AN947_14035 SM00354 helix_turn _helix lactose operon repressor AN947_14070 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AN947_14070 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AN947_14070 SM00493 AN947_14070 AN947_14100 SM00316 Ribosomal protein S1-like RNA-binding domain AN947_14350 SM00382 ATPases associated with a variety of cellular activities AN947_14385 SM00342 helix_turn_helix, arabinose operon control protein AN947_14405 SM00387 Histidine kinase-like ATPases AN947_14405 SM00388 His Kinase A (phosphoacceptor) domain AN947_14405 SM00448 cheY-homologous receiver domain AN947_14475 SM00382 ATPases associated with a variety of cellular activities AN947_14480 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN947_14490 SM00840 AN947_14490 AN947_14505 SM00052 Putative diguanylate phosphodiesterase AN947_14525 SM00491 AN947_14525 AN947_14545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_14545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_14565 SM00062 Bacterial periplasmic substrate-binding proteins AN947_14565 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AN947_14570 SM00382 ATPases associated with a variety of cellular activities AN947_14590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_14610 SM00763 PrkA AAA domain AN947_14640 SM00382 ATPases associated with a variety of cellular activities AN947_14645 SM00849 Metallo-beta-lactamase superfamily AN947_14660 SM00382 ATPases associated with a variety of cellular activities AN947_14675 SM00487 DEAD-like helicases superfamily AN947_14675 SM00490 helicase superfamily c-terminal domain AN947_14675 SM00982 AN947_14675 AN947_14675 SM01058 CarD-like/TRCF domain AN947_14730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_14730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_14740 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN947_14755 SM00843 AN947_14755 AN947_14760 SM00344 helix_turn_helix ASNC type AN947_14765 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AN947_14765 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AN947_14790 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AN947_14795 SM00028 Tetratricopeptide repeats AN947_14805 SM00411 bacterial (prokaryotic) histone like domain AN947_14810 SM00316 Ribosomal protein S1-like RNA-binding domain AN947_14820 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AN947_14830 SM00411 bacterial (prokaryotic) histone like domain AN947_14835 SM00382 ATPases associated with a variety of cellular activities AN947_14835 SM00464 Found in ATP-dependent protease La (LON) AN947_14840 SM00382 ATPases associated with a variety of cellular activities AN947_14840 SM00994 ClpX C4-type zinc finger AN947_14840 SM01086 C-terminal, D2-small domain, of ClpB protein AN947_14865 SM00382 ATPases associated with a variety of cellular activities AN947_14865 SM00448 cheY-homologous receiver domain AN947_14900 SM00052 Putative diguanylate phosphodiesterase AN947_14900 SM00267 diguanylate cyclase AN947_14915 SM00563 Phosphate acyltransferases AN947_14980 SM00495 Chitin-binding domain type 3 AN947_14980 SM00636 AN947_14980 AN947_15030 SM00978 AN947_15030 AN947_15050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_15050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_15055 SM00530 Helix-turn-helix XRE-family like proteins AN947_15070 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AN947_15100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_15105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_15110 SM01144 AN947_15110 AN947_15125 SM00474 3'-5' exonuclease AN947_15155 SM00487 DEAD-like helicases superfamily AN947_15155 SM00491 AN947_15155 AN947_15180 SM00870 AN947_15180 AN947_15200 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AN947_15230 SM00260 Two component signalling adaptor domain AN947_15230 SM00448 cheY-homologous receiver domain AN947_15290 SM00825 Beta-ketoacyl synthase AN947_15300 SM00822 AN947_15300 AN947_15305 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AN947_15335 SM00363 S4 RNA-binding domain AN947_15350 SM00316 Ribosomal protein S1-like RNA-binding domain AN947_15375 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN947_15385 SM00073 Histidine Phosphotransfer domain AN947_15490 SM00382 ATPases associated with a variety of cellular activities AN947_15500 SM00260 Two component signalling adaptor domain AN947_15505 SM00260 Two component signalling adaptor domain AN947_15515 SM00448 cheY-homologous receiver domain AN947_15520 SM00073 Histidine Phosphotransfer domain AN947_15520 SM00260 Two component signalling adaptor domain AN947_15520 SM00387 Histidine kinase-like ATPases AN947_15520 SM01231 AN947_15520 AN947_15530 SM00448 cheY-homologous receiver domain AN947_15545 SM00382 ATPases associated with a variety of cellular activities AN947_15545 SM00962 SRP54-type protein, GTPase domain AN947_15555 SM00855 Phosphoglycerate mutase family AN947_15570 SM00836 DALR anticodon binding domain AN947_15570 SM01016 Arginyl tRNA synthetase N terminal dom AN947_15590 SM00899 AN947_15590 AN947_15595 SM00342 helix_turn_helix, arabinose operon control protein AN947_15605 SM00382 ATPases associated with a variety of cellular activities AN947_15615 SM00881 CoA binding domain AN947_15630 SM00861 Transketolase, pyrimidine binding domain AN947_15720 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN947_15730 SM00825 Beta-ketoacyl synthase AN947_15775 SM00463 Small MutS-related domain AN947_15830 SM00382 ATPases associated with a variety of cellular activities AN947_15860 SM00091 PAS domain AN947_15860 SM00387 Histidine kinase-like ATPases AN947_15860 SM00388 His Kinase A (phosphoacceptor) domain AN947_15865 SM00382 ATPases associated with a variety of cellular activities AN947_15950 SM01130 AN947_15950 AN947_15965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_15965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_15980 SM00028 Tetratricopeptide repeats AN947_16040 SM00937 AN947_16040 AN947_16060 SM01400 AN947_16060 AN947_16170 SM00047 Lysozyme subfamily 2 AN947_16215 SM00138 Methyltransferase, chemotaxis proteins AN947_16220 SM00260 Two component signalling adaptor domain AN947_16220 SM00448 cheY-homologous receiver domain AN947_16225 SM00858 AN947_16225 AN947_16255 SM00823 Phosphopantetheine attachment site AN947_16295 SM01081 Putative carbohydrate binding domain AN947_16315 SM00463 Small MutS-related domain AN947_16320 SM00363 S4 RNA-binding domain AN947_16325 SM00267 diguanylate cyclase AN947_16365 SM00479 AN947_16365 AN947_16380 SM00849 Metallo-beta-lactamase superfamily AN947_16385 SM00257 Lysin motif AN947_16395 SM00938 Nitrogen regulatory protein P-II AN947_16410 SM00977 TilS substrate C-terminal domain AN947_16420 SM00481 DNA polymerase alpha chain like domain AN947_16450 SM00935 Outer membrane protein (OmpH-like) AN947_16505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_16560 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AN947_16610 SM00267 diguanylate cyclase AN947_16655 SM00900 AN947_16655 AN947_16705 SM00464 Found in ATP-dependent protease La (LON) AN947_16740 SM00925 MltA specific insert domain AN947_16830 SM00354 helix_turn _helix lactose operon repressor AN947_16835 SM01038 Beta galactosidase small chain AN947_16855 SM00838 Elongation factor G C-terminus AN947_16855 SM00889 Elongation factor G, domain IV AN947_16860 SM00382 ATPases associated with a variety of cellular activities AN947_16890 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AN947_16895 SM01133 AN947_16895 AN947_16935 SM00986 Uracil DNA glycosylase superfamily AN947_16935 SM00987 UreE urease accessory protein, C-terminal domain AN947_16940 SM00518 AP endonuclease family 2 AN947_16980 SM00448 cheY-homologous receiver domain AN947_16980 SM00862 Transcriptional regulatory protein, C terminal AN947_16985 SM00073 Histidine Phosphotransfer domain AN947_16985 SM00091 PAS domain AN947_16985 SM00387 Histidine kinase-like ATPases AN947_16985 SM00388 His Kinase A (phosphoacceptor) domain AN947_16985 SM00448 cheY-homologous receiver domain AN947_16990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AN947_16990 SM00091 PAS domain AN947_16990 SM00267 diguanylate cyclase AN947_16995 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_17060 SM00382 ATPases associated with a variety of cellular activities AN947_17080 SM00851 MGS-like domain AN947_17080 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AN947_17085 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AN947_17110 SM00957 SecA DEAD-like domain AN947_17110 SM00958 SecA preprotein cross-linking domain AN947_17125 SM00864 Tubulin/FtsZ family, GTPase domain AN947_17125 SM00865 Tubulin/FtsZ family, C-terminal domain AN947_17205 SM00345 helix_turn_helix gluconate operon transcriptional repressor AN947_17205 SM00895 AN947_17205 AN947_17235 SM00644 AN947_17235 AN947_17285 SM00387 Histidine kinase-like ATPases AN947_17285 SM00433 TopoisomeraseII AN947_17325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AN947_17325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_17330 SM00880 AN947_17330 AN947_17330 SM01118 AN947_17330 AN947_17345 SM00287 Bacterial SH3 domain homologues AN947_17355 SM00382 ATPases associated with a variety of cellular activities AN947_17365 SM01192 AN947_17365 AN947_17365 SM01193 AN947_17365 AN947_17380 SM00954 Region found in RelA / SpoT proteins AN947_17390 SM00073 Histidine Phosphotransfer domain AN947_17390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_17390 SM00387 Histidine kinase-like ATPases AN947_17390 SM00388 His Kinase A (phosphoacceptor) domain AN947_17390 SM00448 cheY-homologous receiver domain AN947_17395 SM00267 diguanylate cyclase AN947_17430 SM00358 Double-stranded RNA binding motif AN947_17430 SM00535 Ribonuclease III family AN947_17555 SM00014 Acid phosphatase homologues AN947_17565 SM00917 LeuA allosteric (dimerisation) domain AN947_17570 SM01329 AN947_17570 AN947_17625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_17685 SM00670 Large family of predicted nucleotide-binding domains AN947_17715 SM00563 Phosphate acyltransferases AN947_17750 SM00382 ATPases associated with a variety of cellular activities AN947_17765 SM00116 Domain in cystathionine beta-synthase and other proteins. AN947_17785 SM00382 ATPases associated with a variety of cellular activities AN947_17815 SM00924 MgtE intracellular N domain AN947_17830 SM00382 ATPases associated with a variety of cellular activities AN947_17905 SM00382 ATPases associated with a variety of cellular activities AN947_17955 SM00487 DEAD-like helicases superfamily AN947_17955 SM00490 helicase superfamily c-terminal domain AN947_17990 SM00662 RNA polymerases D AN947_17995 SM00363 S4 RNA-binding domain AN947_17995 SM01390 AN947_17995 AN947_18060 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AN947_18065 SM01374 AN947_18065 AN947_18085 SM00322 K homology RNA-binding domain AN947_18100 SM01382 AN947_18100 AN947_18100 SM01383 AN947_18100 AN947_18120 SM01403 AN947_18120 AN947_18125 SM00967 RNA 2'-O ribose methyltransferase substrate binding AN947_18130 SM00316 Ribosomal protein S1-like RNA-binding domain AN947_18130 SM00357 Cold shock protein domain AN947_18130 SM00955 AN947_18130 AN947_18140 SM00671 Sel1-like repeats. AN947_18145 SM00788 Adenylosuccinate synthetase AN947_18175 SM00382 ATPases associated with a variety of cellular activities AN947_18200 SM00100 Cyclic nucleotide-monophosphate binding domain AN947_18200 SM00419 helix_turn_helix, cAMP Regulatory protein AN947_18205 SM01150 AN947_18205 AN947_18230 SM00729 Elongator protein 3, MiaB family, Radical SAM AN947_18280 SM00965 Secretin and TonB N terminus short domain AN947_18345 SM00859 Semialdehyde dehydrogenase, NAD binding domain AN947_18365 SM00971 Serine acetyltransferase, N-terminal AN947_18380 SM00450 Rhodanese Homology Domain AN947_18410 SM00841 Elongation factor P, C-terminal AN947_18410 SM01185 AN947_18410 AN947_18430 SM00883 Chaperonin 10 Kd subunit AN947_18475 SM00382 ATPases associated with a variety of cellular activities AN947_18475 SM01086 C-terminal, D2-small domain, of ClpB protein AN947_18490 SM00354 helix_turn _helix lactose operon repressor AN947_18495 SM00487 DEAD-like helicases superfamily AN947_18495 SM00490 helicase superfamily c-terminal domain AN947_18505 SM00919 Malic enzyme, NAD binding domain AN947_18505 SM01274 AN947_18505 AN947_18555 SM00448 cheY-homologous receiver domain AN947_18555 SM00862 Transcriptional regulatory protein, C terminal AN947_18560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AN947_18560 SM00387 Histidine kinase-like ATPases AN947_18560 SM00388 His Kinase A (phosphoacceptor) domain AN947_18580 SM00267 diguanylate cyclase AN947_18610 SM00421 helix_turn_helix, Lux Regulon AN947_18610 SM00448 cheY-homologous receiver domain AN947_18615 SM01091 Transporter associated domain AN947_18635 SM00072 Guanylate kinase homologues. AN947_18640 SM01409 AN947_18640 AN947_18645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AN947_18645 SM00954 Region found in RelA / SpoT proteins AN947_18650 SM00487 DEAD-like helicases superfamily AN947_18650 SM00490 helicase superfamily c-terminal domain AN947_18665 SM00448 cheY-homologous receiver domain AN947_18665 SM00862 Transcriptional regulatory protein, C terminal AN947_18675 SM00316 Ribosomal protein S1-like RNA-binding domain AN947_18675 SM00732 Likely ribonuclease with RNase H fold. AN947_18755 SM00382 ATPases associated with a variety of cellular activities AN947_18770 SM00363 S4 RNA-binding domain AN947_18820 SM01230 AN947_18820 AN947_18830 SM00091 PAS domain AN947_18830 SM00387 Histidine kinase-like ATPases AN947_18830 SM00388 His Kinase A (phosphoacceptor) domain AN947_18835 SM00382 ATPases associated with a variety of cellular activities AN947_18835 SM00448 cheY-homologous receiver domain AN947_18840 SM00052 Putative diguanylate phosphodiesterase AN947_18840 SM00267 diguanylate cyclase AN947_18970 SM00382 ATPases associated with a variety of cellular activities AN947_19010 SM00470 ParB-like nuclease domain AN947_19025 SM01228 AN947_19025 AN947_19095 SM01059 Chloramphenicol acetyltransferase AN947_19115 SM00829 Enoylreductase AN947_19140 SM00382 ATPases associated with a variety of cellular activities AN947_19210 SM00857 Resolvase, N terminal domain AN947_19295 SM00470 ParB-like nuclease domain AN947_19375 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AN947_19375 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AN947_19375 SM00493 AN947_19375 AN947_19490 SM00052 Putative diguanylate phosphodiesterase AN947_19555 SM00327 von Willebrand factor (vWF) type A domain AN947_19680 SM00778 Zinc-binding domain of primase-helicase AN947_19755 SM00479 AN947_19755 AN947_19790 SM00857 Resolvase, N terminal domain AN947_19965 SM00318 Staphylococcal nuclease homologues AN947_19970 SM00411 bacterial (prokaryotic) histone like domain AN947_19980 SM00530 Helix-turn-helix XRE-family like proteins AN947_20035 SM00382 ATPases associated with a variety of cellular activities AN947_20095 SM00155 Phospholipase D. Active site motifs.