locus-tag class description O3Y_00005 PF00258 Flavodoxin O3Y_00010 PF10396 GTP-binding protein TrmE N-terminus O3Y_00010 PF12631 MnmE helical domain O3Y_00010 PF01926 50S ribosome-binding GTPase O3Y_00015 PF14849 YidC periplasmic domain O3Y_00015 PF02096 60Kd inner membrane protein O3Y_00020 PF01809 Putative membrane protein insertion efficiency factor O3Y_00025 PF00825 Ribonuclease P O3Y_00030 PF00468 Ribosomal protein L34 O3Y_00035 PF00005 ABC transporter O3Y_00040 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_00045 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_00050 PF11638 DnaA N-terminal domain O3Y_00050 PF08299 Bacterial dnaA protein helix-turn-helix O3Y_00050 PF00308 Bacterial dnaA protein O3Y_00055 PF00712 DNA polymerase III beta subunit, N-terminal domain O3Y_00055 PF02767 DNA polymerase III beta subunit, central domain O3Y_00055 PF02768 DNA polymerase III beta subunit, C-terminal domain O3Y_00060 PF02463 RecF/RecN/SMC N terminal domain O3Y_00065 PF01751 Toprim domain O3Y_00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_00065 PF18053 DNA gyrase B subunit insert domain O3Y_00065 PF00986 DNA gyrase B subunit, carboxyl terminus O3Y_00065 PF00204 DNA gyrase B O3Y_00080 PF00011 Hsp20/alpha crystallin family O3Y_00085 PF00155 Aminotransferase class I and II O3Y_00090 PF05746 DALR anticodon binding domain O3Y_00090 PF02092 Glycyl-tRNA synthetase beta subunit O3Y_00095 PF02091 Glycyl-tRNA synthetase alpha subunit O3Y_00100 PF01169 Uncharacterized protein family UPF0016 O3Y_00110 PF01206 Sulfurtransferase TusA O3Y_00120 PF00107 Zinc-binding dehydrogenase O3Y_00120 PF08240 Alcohol dehydrogenase GroES-like domain O3Y_00125 PF00585 C-terminal regulatory domain of Threonine dehydratase O3Y_00125 PF00291 Pyridoxal-phosphate dependent enzyme O3Y_00130 PF00920 Dehydratase family O3Y_00135 PF01063 Amino-transferase class IV O3Y_00145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain O3Y_00145 PF00205 Thiamine pyrophosphate enzyme, central domain O3Y_00145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain O3Y_00150 PF01078 Magnesium chelatase, subunit ChlI O3Y_00150 PF13335 Magnesium chelatase, subunit ChlI C-terminal O3Y_00155 PF01553 Acyltransferase O3Y_00160 PF01323 DSBA-like thioredoxin domain O3Y_00165 PF01636 Phosphotransferase enzyme family O3Y_00170 PF13746 4Fe-4S dicluster domain O3Y_00170 PF12801 4Fe-4S binding domain O3Y_00170 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase O3Y_00175 PF06288 Protein of unknown function (DUF1040) O3Y_00180 PF07070 SpoOM protein O3Y_00185 PF03006 Haemolysin-III related O3Y_00195 PF02386 Cation transport protein O3Y_00200 PF02254 TrkA-N domain O3Y_00200 PF02080 TrkA-C domain O3Y_00205 PF01189 16S rRNA methyltransferase RsmB/F O3Y_00205 PF01029 NusB family O3Y_00210 PF00551 Formyl transferase O3Y_00210 PF02911 Formyl transferase, C-terminal domain O3Y_00215 PF01327 Polypeptide deformylase O3Y_00220 PF01476 LysM domain O3Y_00225 PF02481 DNA recombination-mediator protein A O3Y_00225 PF17782 DprA winged helix domain O3Y_00230 PF04361 Protein of unknown function (DUF494) O3Y_00235 PF01396 Topoisomerase DNA binding C4 zinc finger O3Y_00240 PF02222 ATP-grasp domain O3Y_00240 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain O3Y_00245 PF00731 AIR carboxylase O3Y_00250 PF01300 Telomere recombination O3Y_00255 PF01218 Coproporphyrinogen III oxidase O3Y_00260 PF08501 Shikimate dehydrogenase substrate binding domain O3Y_00260 PF01488 Shikimate / quinate 5-dehydrogenase O3Y_00260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain O3Y_00270 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_00280 PF02537 CrcB-like protein, Camphor Resistance (CrcB) O3Y_00285 PF13667 ThiC-associated domain O3Y_00285 PF01964 Radical SAM ThiC family O3Y_00290 PF02581 Thiamine monophosphate synthase O3Y_00295 PF00899 ThiF family O3Y_00300 PF02597 ThiS family O3Y_00305 PF05690 Thiazole biosynthesis protein ThiG O3Y_00310 PF04055 Radical SAM superfamily O3Y_00310 PF06968 Biotin and Thiamin Synthesis associated domain O3Y_00315 PF01321 Creatinase/Prolidase N-terminal domain O3Y_00315 PF01321 Creatinase/Prolidase N-terminal domain O3Y_00315 PF00557 Metallopeptidase family M24 O3Y_00315 PF00557 Metallopeptidase family M24 O3Y_00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_00320 PF03466 LysR substrate binding domain O3Y_00325 PF07690 Major Facilitator Superfamily O3Y_00335 PF01037 Lrp/AsnC ligand binding domain O3Y_00340 PF00563 EAL domain O3Y_00340 PF00990 Diguanylate cyclase, GGDEF domain O3Y_00340 PF08448 PAS fold O3Y_00345 PF04445 Putative SAM-dependent methyltransferase O3Y_00355 PF00892 EamA-like transporter family O3Y_00360 PF00582 Universal stress protein family O3Y_00365 PF00210 Ferritin-like domain O3Y_00370 PF10625 Universal stress protein B (UspB) O3Y_00385 PF02646 RmuC family O3Y_00390 PF01209 ubiE/COQ5 methyltransferase family O3Y_00395 PF02036 SCP-2 sterol transfer family O3Y_00400 PF03109 ABC1 family O3Y_00405 PF02416 mttA/Hcf106 family O3Y_00410 PF02416 mttA/Hcf106 family O3Y_00415 PF00902 Sec-independent protein translocase protein (TatC) O3Y_00420 PF03150 Di-haem cytochrome c peroxidase O3Y_00420 PF00034 Cytochrome c O3Y_00425 PF01554 MatE O3Y_00435 PF00717 Peptidase S24-like O3Y_00435 PF01726 LexA DNA binding domain O3Y_00440 PF01553 Acyltransferase O3Y_00445 PF01040 UbiA prenyltransferase family O3Y_00450 PF04345 Chorismate lyase O3Y_00455 PF03748 Flagellar basal body-associated protein FliL O3Y_00460 PF02203 Tar ligand binding domain homologue O3Y_00460 PF00672 HAMP domain O3Y_00460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_00465 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease O3Y_00465 PF01694 Rhomboid family O3Y_00470 PF00581 Rhodanese-like domain O3Y_00475 PF01026 TatD related DNase O3Y_00480 PF00490 Delta-aminolevulinic acid dehydratase O3Y_00490 PF00476 DNA polymerase family A O3Y_00490 PF01367 5'-3' exonuclease, C-terminal SAM fold O3Y_00490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain O3Y_00490 PF01612 3'-5' exonuclease O3Y_00495 PF01926 50S ribosome-binding GTPase O3Y_00500 PF00034 Cytochrome c O3Y_00510 PF04220 Der GTPase activator (YihI) O3Y_00515 PF10675 Protein of unknown function (DUF2489) O3Y_00520 PF06969 HemN C-terminal domain O3Y_00520 PF04055 Radical SAM superfamily O3Y_00525 PF07219 HemY protein N-terminus O3Y_00530 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase O3Y_00535 PF02602 Uroporphyrinogen-III synthase HemD O3Y_00540 PF03900 Porphobilinogen deaminase, C-terminal domain O3Y_00540 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain O3Y_00545 PF01295 Adenylate cyclase, class-I O3Y_00545 PF12633 Adenylate cyclase NT domain O3Y_00550 PF01491 Frataxin-like domain O3Y_00560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain O3Y_00560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain O3Y_00565 PF01678 Diaminopimelate epimerase O3Y_00570 PF04340 Protein of unknown function, DUF484 O3Y_00575 PF02899 Phage integrase, N-terminal SAM-like domain O3Y_00575 PF00589 Phage integrase family O3Y_00580 PF13419 Haloacid dehalogenase-like hydrolase O3Y_00585 PF00990 Diguanylate cyclase, GGDEF domain O3Y_00585 PF10442 FIST C domain O3Y_00585 PF00563 EAL domain O3Y_00585 PF08495 FIST N domain O3Y_00605 PF12146 Serine aminopeptidase, S33 O3Y_00610 PF01810 LysE type translocator O3Y_00615 PF08668 HDOD domain O3Y_00615 PF00563 EAL domain O3Y_00620 PF00210 Ferritin-like domain O3Y_00660 PF00448 SRP54-type protein, GTPase domain O3Y_00660 PF02881 SRP54-type protein, helical bundle domain O3Y_00665 PF00005 ABC transporter O3Y_00670 PF18075 FtsX extracellular domain O3Y_00675 PF04545 Sigma-70, region 4 O3Y_00675 PF04542 Sigma-70 region 2 O3Y_00675 PF00140 Sigma-70 factor, region 1.2 O3Y_00680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain O3Y_00680 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_00685 PF00440 Bacterial regulatory proteins, tetR family O3Y_00695 PF05958 tRNA (Uracil-5-)-methyltransferase O3Y_00700 PF00593 TonB dependent receptor O3Y_00700 PF07715 TonB-dependent Receptor Plug Domain O3Y_00705 PF04151 Bacterial pre-peptidase C-terminal domain O3Y_00705 PF00082 Subtilase family O3Y_00705 PF05922 Peptidase inhibitor I9 O3Y_00710 PF01177 Asp/Glu/Hydantoin racemase O3Y_00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_00720 PF03466 LysR substrate binding domain O3Y_00725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain O3Y_00725 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain O3Y_00730 PF04380 Membrane fusogenic activity O3Y_00735 PF00873 AcrB/AcrD/AcrF family O3Y_00740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion O3Y_00745 PF00440 Bacterial regulatory proteins, tetR family O3Y_00750 PF13361 UvrD-like helicase C-terminal domain O3Y_00750 PF00580 UvrD/REP helicase N-terminal domain O3Y_00755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III O3Y_00765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_00765 PF00005 ABC transporter O3Y_00770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle O3Y_00780 PF12911 N-terminal TM domain of oligopeptide transport permease C O3Y_00780 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_00790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region O3Y_00855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain O3Y_00855 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_00860 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ O3Y_00865 PF01432 Peptidase family M3 O3Y_00870 PF13361 UvrD-like helicase C-terminal domain O3Y_00870 PF00580 UvrD/REP helicase N-terminal domain O3Y_00875 PF01810 LysE type translocator O3Y_00880 PF12833 Helix-turn-helix domain O3Y_00890 PF00892 EamA-like transporter family O3Y_00895 PF09382 RQC domain O3Y_00895 PF00271 Helicase conserved C-terminal domain O3Y_00895 PF00270 DEAD/DEAH box helicase O3Y_00895 PF00570 HRDC domain O3Y_00895 PF16124 RecQ zinc-binding O3Y_00910 PF00005 ABC transporter O3Y_00910 PF00664 ABC transporter transmembrane region O3Y_00915 PF07715 TonB-dependent Receptor Plug Domain O3Y_00915 PF00593 TonB dependent receptor O3Y_00920 PF00005 ABC transporter O3Y_00925 PF01497 Periplasmic binding protein O3Y_00930 PF01032 FecCD transport family O3Y_00935 PF01380 SIS domain O3Y_00935 PF01418 Helix-turn-helix domain, rpiR family O3Y_00940 PF13580 SIS domain O3Y_00945 PF00367 phosphotransferase system, EIIB O3Y_00945 PF02378 Phosphotransferase system, EIIC O3Y_00950 PF03350 Uncharacterized protein family, UPF0114 O3Y_00955 PF03755 YicC-like family, N-terminal region O3Y_00955 PF08340 Domain of unknown function (DUF1732) O3Y_00960 PF03725 3' exoribonuclease family, domain 2 O3Y_00960 PF01138 3' exoribonuclease family, domain 1 O3Y_00965 PF00156 Phosphoribosyl transferase domain O3Y_00970 PF03279 Bacterial lipid A biosynthesis acyltransferase O3Y_00975 PF03279 Bacterial lipid A biosynthesis acyltransferase O3Y_00980 PF00440 Bacterial regulatory proteins, tetR family O3Y_00985 PF04127 DNA / pantothenate metabolism flavoprotein O3Y_00985 PF02441 Flavoprotein O3Y_00990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_00990 PF00672 HAMP domain O3Y_00990 PF02743 Cache domain O3Y_00995 PF04002 RadC-like JAB domain O3Y_01000 PF00830 Ribosomal L28 family O3Y_01005 PF00471 Ribosomal protein L33 O3Y_01015 PF06827 Zinc finger found in FPG and IleRS O3Y_01015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain O3Y_01015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain O3Y_01020 PF01467 Cytidylyltransferase-like O3Y_01025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) O3Y_01030 PF00535 Glycosyl transferase family 2 O3Y_01035 PF01075 Glycosyltransferase family 9 (heptosyltransferase) O3Y_01070 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) O3Y_01075 PF04488 Glycosyltransferase sugar-binding region containing DXD motif O3Y_01085 PF01075 Glycosyltransferase family 9 (heptosyltransferase) O3Y_01100 PF00457 Glycosyl hydrolases family 11 O3Y_01100 PF01522 Polysaccharide deacetylase O3Y_01105 PF01370 NAD dependent epimerase/dehydratase family O3Y_01110 PF00483 Nucleotidyl transferase O3Y_01110 PF01050 Mannose-6-phosphate isomerase O3Y_01115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III O3Y_01115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain O3Y_01115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I O3Y_01115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II O3Y_01120 PF16363 GDP-mannose 4,6 dehydratase O3Y_01125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family O3Y_01140 PF00005 ABC transporter O3Y_01140 PF14524 Wzt C-terminal domain O3Y_01150 PF00501 AMP-binding enzyme O3Y_01150 PF13193 AMP-binding enzyme C-terminal domain O3Y_01155 PF00171 Aldehyde dehydrogenase family O3Y_01155 PF00465 Iron-containing alcohol dehydrogenase O3Y_01165 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_01190 PF01527 Transposase O3Y_01195 PF00665 Integrase core domain O3Y_01210 PF02719 Polysaccharide biosynthesis protein O3Y_01220 PF01370 NAD dependent epimerase/dehydratase family O3Y_01225 PF02397 Bacterial sugar transferase O3Y_01230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain O3Y_01230 PF00753 Metallo-beta-lactamase superfamily O3Y_01230 PF10996 Beta-Casp domain O3Y_01235 PF00924 Mechanosensitive ion channel O3Y_01240 PF03167 Uracil DNA glycosylase superfamily O3Y_01245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain O3Y_01250 PF04222 Protein of unknown function (DUF416) O3Y_01255 PF01238 Phosphomannose isomerase type I O3Y_01260 PF00480 ROK family O3Y_01265 PF00571 CBS domain O3Y_01265 PF01595 Cyclin M transmembrane N-terminal domain O3Y_01270 PF00216 Bacterial DNA-binding protein O3Y_01280 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain O3Y_01280 PF02844 Phosphoribosylglycinamide synthetase, N domain O3Y_01280 PF02843 Phosphoribosylglycinamide synthetase, C domain O3Y_01285 PF01808 AICARFT/IMPCHase bienzyme O3Y_01285 PF02142 MGS-like domain O3Y_01290 PF13411 MerR HTH family regulatory protein O3Y_01295 PF18500 CadC C-terminal domain 1 O3Y_01295 PF00486 Transcriptional regulatory protein, C terminal O3Y_01300 PF13520 Amino acid permease O3Y_01305 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain O3Y_01305 PF01276 Orn/Lys/Arg decarboxylase, major domain O3Y_01305 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain O3Y_01310 PF17200 Single Cache domain 2 O3Y_01310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_01310 PF00672 HAMP domain O3Y_01325 PF00593 TonB dependent receptor O3Y_01325 PF07715 TonB-dependent Receptor Plug Domain O3Y_01330 PF01081 KDPG and KHG aldolase O3Y_01335 PF02447 GntP family permease O3Y_01340 PF01202 Shikimate kinase O3Y_01345 PF00920 Dehydratase family O3Y_01350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family O3Y_01350 PF00356 Bacterial regulatory proteins, lacI family O3Y_01355 PF02954 Bacterial regulatory protein, Fis family O3Y_01360 PF01207 Dihydrouridine synthase (Dus) O3Y_01370 PF02785 Biotin carboxylase C-terminal domain O3Y_01370 PF00289 Biotin carboxylase, N-terminal domain O3Y_01370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain O3Y_01375 PF00364 Biotin-requiring enzyme O3Y_01380 PF01220 Dehydroquinase class II O3Y_01385 PF13193 AMP-binding enzyme C-terminal domain O3Y_01385 PF16177 Acetyl-coenzyme A synthetase N-terminus O3Y_01385 PF00501 AMP-binding enzyme O3Y_01400 PF12832 MFS_1 like family O3Y_01405 PF00072 Response regulator receiver domain O3Y_01405 PF09456 RcsC Alpha-Beta-Loop (ABL) O3Y_01405 PF00512 His Kinase A (phospho-acceptor) domain O3Y_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_01410 PF02541 Ppx/GppA phosphatase family O3Y_01415 PF00271 Helicase conserved C-terminal domain O3Y_01415 PF00270 DEAD/DEAH box helicase O3Y_01420 PF00085 Thioredoxin O3Y_01425 PF07497 Rho termination factor, RNA-binding domain O3Y_01425 PF07498 Rho termination factor, N-terminal domain O3Y_01425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain O3Y_01435 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase O3Y_01440 PF00175 Oxidoreductase NAD-binding domain O3Y_01440 PF00970 Oxidoreductase FAD-binding domain O3Y_01440 PF00111 2Fe-2S iron-sulfur cluster binding domain O3Y_01445 PF00175 Oxidoreductase NAD-binding domain O3Y_01450 PF13091 PLD-like domain O3Y_01460 PF01565 FAD binding domain O3Y_01460 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain O3Y_01465 PF02237 Biotin protein ligase C terminal domain O3Y_01465 PF03099 Biotin/lipoate A/B protein ligase family O3Y_01465 PF08279 HTH domain O3Y_01470 PF00485 Phosphoribulokinase / Uridine kinase family O3Y_01475 PF00009 Elongation factor Tu GTP binding domain O3Y_01475 PF03144 Elongation factor Tu domain 2 O3Y_01475 PF03143 Elongation factor Tu C-terminal domain O3Y_01480 PF00584 SecE/Sec61-gamma subunits of protein translocation complex O3Y_01485 PF00467 KOW motif O3Y_01485 PF02357 Transcription termination factor nusG O3Y_01490 PF00298 Ribosomal protein L11, RNA binding domain O3Y_01490 PF03946 Ribosomal protein L11, N-terminal domain O3Y_01495 PF00687 Ribosomal protein L1p/L10e family O3Y_01500 PF00466 Ribosomal protein L10 O3Y_01505 PF16320 Ribosomal protein L7/L12 dimerisation domain O3Y_01505 PF00542 Ribosomal protein L7/L12 C-terminal domain O3Y_01510 PF04560 RNA polymerase Rpb2, domain 7 O3Y_01510 PF10385 RNA polymerase beta subunit external 1 domain O3Y_01510 PF04563 RNA polymerase beta subunit O3Y_01510 PF04561 RNA polymerase Rpb2, domain 2 O3Y_01510 PF04565 RNA polymerase Rpb2, domain 3 O3Y_01510 PF00562 RNA polymerase Rpb2, domain 6 O3Y_01515 PF04998 RNA polymerase Rpb1, domain 5 O3Y_01515 PF05000 RNA polymerase Rpb1, domain 4 O3Y_01515 PF00623 RNA polymerase Rpb1, domain 2 O3Y_01515 PF04983 RNA polymerase Rpb1, domain 3 O3Y_01515 PF04997 RNA polymerase Rpb1, domain 1 O3Y_01520 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ O3Y_01525 PF09297 NADH pyrophosphatase zinc ribbon domain O3Y_01525 PF00293 NUDIX domain O3Y_01530 PF01208 Uroporphyrinogen decarboxylase (URO-D) O3Y_01535 PF00440 Bacterial regulatory proteins, tetR family O3Y_01535 PF08360 QacR-like protein, C-terminal region O3Y_01545 PF01551 Peptidase family M23 O3Y_01550 PF01676 Metalloenzyme superfamily O3Y_01550 PF06415 BPG-independent PGAM N-terminus (iPGM_N) O3Y_01560 PF00939 Sodium:sulfate symporter transmembrane region O3Y_01565 PF02666 Phosphatidylserine decarboxylase O3Y_01570 PF03193 RsgA GTPase O3Y_01575 PF00929 Exonuclease O3Y_01580 PF08331 Domain of unknown function (DUF1730) O3Y_01585 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE O3Y_01590 PF01520 N-acetylmuramoyl-L-alanine amidase O3Y_01595 PF01119 DNA mismatch repair protein, C-terminal domain O3Y_01595 PF08676 MutL C terminal dimerisation domain O3Y_01605 PF17209 Hfq protein O3Y_01610 PF16360 GTP-binding GTPase Middle Region O3Y_01610 PF01926 50S ribosome-binding GTPase O3Y_01610 PF13167 GTP-binding GTPase N-terminal O3Y_01615 PF12221 Bacterial membrane protein N terminal O3Y_01615 PF01145 SPFH domain / Band 7 family O3Y_01620 PF01145 SPFH domain / Band 7 family O3Y_01625 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) O3Y_01630 PF04102 SlyX O3Y_01640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase O3Y_01640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase O3Y_01645 PF08348 YheO-like PAS domain O3Y_01645 PF13309 HTH domain O3Y_01650 PF02635 DsrE/DsrF-like family O3Y_01655 PF02635 DsrE/DsrF-like family O3Y_01665 PF00164 Ribosomal protein S12/S23 O3Y_01670 PF00177 Ribosomal protein S7p/S5e O3Y_01675 PF00009 Elongation factor Tu GTP binding domain O3Y_01675 PF03144 Elongation factor Tu domain 2 O3Y_01675 PF14492 Elongation Factor G, domain II O3Y_01675 PF03764 Elongation factor G, domain IV O3Y_01675 PF00679 Elongation factor G C-terminus O3Y_01680 PF03144 Elongation factor Tu domain 2 O3Y_01680 PF00009 Elongation factor Tu GTP binding domain O3Y_01680 PF03143 Elongation factor Tu C-terminal domain O3Y_01685 PF04324 BFD-like [2Fe-2S] binding domain O3Y_01690 PF00210 Ferritin-like domain O3Y_01695 PF01250 Ribosomal protein S6 O3Y_01700 PF00436 Single-strand binding protein family O3Y_01705 PF01084 Ribosomal protein S18 O3Y_01710 PF01281 Ribosomal protein L9, N-terminal domain O3Y_01710 PF03948 Ribosomal protein L9, C-terminal domain O3Y_01720 PF03796 DnaB-like helicase C terminal domain O3Y_01720 PF00772 DnaB-like helicase N terminal domain O3Y_01725 PF00842 Alanine racemase, C-terminal domain O3Y_01725 PF01168 Alanine racemase, N-terminal domain O3Y_01730 PF01894 Uncharacterised protein family UPF0047 O3Y_01735 PF00342 Phosphoglucose isomerase O3Y_01740 PF12706 Beta-lactamase superfamily domain O3Y_01750 PF01475 Ferric uptake regulator family O3Y_01755 PF01207 Dihydrouridine synthase (Dus) O3Y_01760 PF09583 Phage shock protein G (Phageshock_PspG) O3Y_01775 PF00175 Oxidoreductase NAD-binding domain O3Y_01775 PF00258 Flavodoxin O3Y_01775 PF00667 FAD binding domain O3Y_01780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain O3Y_01780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain O3Y_01785 PF01507 Phosphoadenosine phosphosulfate reductase family O3Y_01790 PF00999 Sodium/hydrogen exchanger family O3Y_01795 PF02574 Homocysteine S-methyltransferase O3Y_01795 PF00809 Pterin binding enzyme O3Y_01795 PF02965 Vitamin B12 dependent methionine synthase, activation domain O3Y_01795 PF02607 B12 binding domain O3Y_01795 PF02310 B12 binding domain O3Y_01800 PF01842 ACT domain O3Y_01800 PF00696 Amino acid kinase family O3Y_01805 PF00266 Aminotransferase class-V O3Y_01815 PF17755 UvrA DNA-binding domain O3Y_01815 PF00005 ABC transporter O3Y_01815 PF17760 UvrA interaction domain O3Y_01820 PF00483 Nucleotidyl transferase O3Y_01825 PF00196 Bacterial regulatory proteins, luxR family O3Y_01830 PF00436 Single-strand binding protein family O3Y_01835 PF00990 Diguanylate cyclase, GGDEF domain O3Y_01835 PF17157 Gammaproteobacterial periplasmic sensor domain O3Y_01835 PF00563 EAL domain O3Y_01855 PF03958 Bacterial type II/III secretion system short domain O3Y_01855 PF07660 Secretin and TonB N terminus short domain O3Y_01855 PF11741 AMIN domain O3Y_01855 PF00263 Bacterial type II and III secretion system protein O3Y_01860 PF13401 AAA domain O3Y_01860 PF01471 Putative peptidoglycan binding domain O3Y_01870 PF00437 Type II/IV secretion system protein O3Y_01875 PF00482 Type II secretion system (T2SS), protein F O3Y_01885 PF07963 Prokaryotic N-terminal methylation motif O3Y_01885 PF00114 Pilin (bacterial filament) O3Y_01890 PF07963 Prokaryotic N-terminal methylation motif O3Y_01890 PF00114 Pilin (bacterial filament) O3Y_01925 PF04085 rod shape-determining protein MreC O3Y_01930 PF04093 rod shape-determining protein MreD O3Y_01935 PF02545 Maf-like protein O3Y_01940 PF00575 S1 RNA binding domain O3Y_01940 PF10150 Ribonuclease E/G family O3Y_01945 PF13502 AsmA-like C-terminal region O3Y_01945 PF13116 Protein of unknown function O3Y_01950 PF00795 Carbon-nitrogen hydrolase O3Y_01955 PF01523 Putative modulator of DNA gyrase O3Y_01965 PF06877 Regulator of ribonuclease activity B O3Y_01980 PF00582 Universal stress protein family O3Y_01990 PF16868 NMT1-like family O3Y_01995 PF02863 Arginine repressor, C-terminal domain O3Y_01995 PF01316 Arginine repressor, DNA binding domain O3Y_02000 PF00056 lactate/malate dehydrogenase, NAD binding domain O3Y_02000 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain O3Y_02005 PF13520 Amino acid permease O3Y_02010 PF00348 Polyprenyl synthetase O3Y_02015 PF00829 Ribosomal prokaryotic L21 protein O3Y_02020 PF01016 Ribosomal L27 protein O3Y_02025 PF01018 GTP1/OBG O3Y_02025 PF01926 50S ribosome-binding GTPase O3Y_02030 PF06738 Putative threonine/serine exporter O3Y_02035 PF12821 Threonine/Serine exporter, ThrE O3Y_02040 PF00186 Dihydrofolate reductase O3Y_02045 PF00149 Calcineurin-like phosphoesterase O3Y_02050 PF04379 ApaG domain O3Y_02055 PF00398 Ribosomal RNA adenine dimethylase O3Y_02060 PF04166 Pyridoxal phosphate biosynthetic protein PdxA O3Y_02065 PF09312 SurA N-terminal domain O3Y_02070 PF03968 OstA-like protein O3Y_02070 PF04453 LPS transport system D O3Y_02075 PF00226 DnaJ domain O3Y_02075 PF05099 Tellurite resistance protein TerB O3Y_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_02080 PF00672 HAMP domain O3Y_02080 PF12729 Four helix bundle sensory module for signal transduction O3Y_02085 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain O3Y_02085 PF01464 Transglycosylase SLT domain O3Y_02090 PF04362 Bacterial Fe(2+) trafficking O3Y_02095 PF00633 Helix-hairpin-helix motif O3Y_02095 PF00730 HhH-GPD superfamily base excision DNA repair protein O3Y_02095 PF14815 NUDIX domain O3Y_02095 PF10576 Iron-sulfur binding domain of endonuclease III O3Y_02100 PF02390 Putative methyltransferase O3Y_02105 PF04960 Glutaminase O3Y_02110 PF06969 HemN C-terminal domain O3Y_02110 PF04055 Radical SAM superfamily O3Y_02115 PF01725 Ham1 family O3Y_02125 PF02594 Uncharacterised ACR, YggU family COG1872 O3Y_02130 PF02325 YGGT family O3Y_02135 PF03807 NADP oxidoreductase coenzyme F420-dependent O3Y_02135 PF14748 Pyrroline-5-carboxylate reductase dimerisation O3Y_02140 PF01168 Alanine racemase, N-terminal domain O3Y_02145 PF00437 Type II/IV secretion system protein O3Y_02150 PF00437 Type II/IV secretion system protein O3Y_02160 PF01479 S4 domain O3Y_02160 PF00579 tRNA synthetases class I (W and Y) O3Y_02165 PF03652 Holliday junction resolvase O3Y_02170 PF02622 Uncharacterized ACR, COG1678 O3Y_02175 PF02951 Prokaryotic glutathione synthetase, N-terminal domain O3Y_02175 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain O3Y_02180 PF04452 RNA methyltransferase O3Y_02185 PF04231 Endonuclease I O3Y_02190 PF10263 SprT-like family O3Y_02190 PF17283 SprT-like zinc ribbon domain O3Y_02195 PF00438 S-adenosylmethionine synthetase, N-terminal domain O3Y_02195 PF02772 S-adenosylmethionine synthetase, central domain O3Y_02195 PF02773 S-adenosylmethionine synthetase, C-terminal domain O3Y_02205 PF00456 Transketolase, thiamine diphosphate binding domain O3Y_02205 PF02780 Transketolase, C-terminal domain O3Y_02205 PF02779 Transketolase, pyrimidine binding domain O3Y_02210 PF03466 LysR substrate binding domain O3Y_02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_02215 PF07715 TonB-dependent Receptor Plug Domain O3Y_02215 PF00593 TonB dependent receptor O3Y_02220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain O3Y_02220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain O3Y_02225 PF00162 Phosphoglycerate kinase O3Y_02230 PF01116 Fructose-bisphosphate aldolase class-II O3Y_02240 PF00924 Mechanosensitive ion channel O3Y_02240 PF05552 Conserved TM helix O3Y_02245 PF01810 LysE type translocator O3Y_02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_02250 PF03466 LysR substrate binding domain O3Y_02255 PF04402 Protein of unknown function (DUF541) O3Y_02260 PF02887 Pyruvate kinase, alpha/beta domain O3Y_02260 PF00224 Pyruvate kinase, barrel domain O3Y_02265 PF08220 DeoR-like helix-turn-helix domain O3Y_02265 PF00455 DeoR C terminal sensor domain O3Y_02270 PF01380 SIS domain O3Y_02275 PF03480 Bacterial extracellular solute-binding protein, family 7 O3Y_02330 PF00075 RNase H O3Y_02345 PF01527 Transposase O3Y_02350 PF01527 Transposase O3Y_02355 PF13737 Transposase DDE domain O3Y_02360 PF13737 Transposase DDE domain O3Y_02365 PF07963 Prokaryotic N-terminal methylation motif O3Y_02365 PF00114 Pilin (bacterial filament) O3Y_02370 PF08525 Opacity-associated protein A N-terminal motif O3Y_02370 PF01551 Peptidase family M23 O3Y_02370 PF01476 LysM domain O3Y_02400 PF04002 RadC-like JAB domain O3Y_02420 PF01527 Transposase O3Y_02425 PF00665 Integrase core domain O3Y_02430 PF00589 Phage integrase family O3Y_02430 PF13356 Arm DNA-binding domain O3Y_02435 PF03979 Sigma-70 factor, region 1.1 O3Y_02435 PF00140 Sigma-70 factor, region 1.2 O3Y_02435 PF04546 Sigma-70, non-essential region O3Y_02435 PF04545 Sigma-70, region 4 O3Y_02435 PF04539 Sigma-70 region 3 O3Y_02435 PF04542 Sigma-70 region 2 O3Y_02440 PF10410 DnaB-helicase binding domain of primase O3Y_02440 PF08278 DNA primase DnaG DnaB-binding O3Y_02440 PF08275 DNA primase catalytic core, N-terminal domain O3Y_02440 PF01807 CHC2 zinc finger O3Y_02445 PF09424 Yqey-like protein O3Y_02450 PF01165 Ribosomal protein S21 O3Y_02455 PF00814 Glycoprotease family O3Y_02460 PF00561 alpha/beta hydrolase fold O3Y_02465 PF02660 Glycerol-3-phosphate acyltransferase O3Y_02475 PF02152 Dihydroneopterin aldolase O3Y_02480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) O3Y_02485 PF02673 Bacitracin resistance protein BacA O3Y_02490 PF04977 Septum formation initiator O3Y_02495 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase O3Y_02500 PF02542 YgbB family O3Y_02505 PF01142 tRNA pseudouridine synthase D (TruD) O3Y_02510 PF01975 Survival protein SurE O3Y_02520 PF01551 Peptidase family M23 O3Y_02520 PF01476 LysM domain O3Y_02525 PF04545 Sigma-70, region 4 O3Y_02525 PF04539 Sigma-70 region 3 O3Y_02525 PF00140 Sigma-70 factor, region 1.2 O3Y_02525 PF04542 Sigma-70 region 2 O3Y_02530 PF01624 MutS domain I O3Y_02530 PF00488 MutS domain V O3Y_02530 PF05190 MutS family domain IV O3Y_02530 PF05192 MutS domain III O3Y_02530 PF05188 MutS domain II O3Y_02535 PF00291 Pyridoxal-phosphate dependent enzyme O3Y_02545 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_02550 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_02555 PF12857 TOBE-like domain O3Y_02555 PF00005 ABC transporter O3Y_02560 PF02464 Competence-damaged protein O3Y_02565 PF00154 recA bacterial DNA recombination protein O3Y_02570 PF02631 RecX family O3Y_02575 PF01411 tRNA synthetases class II (A) O3Y_02575 PF02272 DHHA1 domain O3Y_02575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain O3Y_02580 PF01842 ACT domain O3Y_02580 PF00696 Amino acid kinase family O3Y_02580 PF13840 ACT domain O3Y_02585 PF02599 Global regulator protein family O3Y_02590 PF04277 Oxaloacetate decarboxylase, gamma chain O3Y_02595 PF00364 Biotin-requiring enzyme O3Y_02595 PF02436 Conserved carboxylase domain O3Y_02595 PF00682 HMGL-like O3Y_02600 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit O3Y_02610 PF09335 SNARE associated Golgi protein O3Y_02615 PF00675 Insulinase (Peptidase family M16) O3Y_02615 PF05193 Peptidase M16 inactive domain O3Y_02620 PF04262 Glutamate-cysteine ligase O3Y_02625 PF02664 S-Ribosylhomocysteinase (LuxS) O3Y_02630 PF03471 Transporter associated domain O3Y_02630 PF00571 CBS domain O3Y_02630 PF01595 Cyclin M transmembrane N-terminal domain O3Y_02635 PF01578 Cytochrome C assembly protein O3Y_02640 PF02978 Signal peptide binding domain O3Y_02640 PF02881 SRP54-type protein, helical bundle domain O3Y_02640 PF00448 SRP54-type protein, GTPase domain O3Y_02645 PF00886 Ribosomal protein S16 O3Y_02650 PF01782 RimM N-terminal domain O3Y_02650 PF05239 PRC-barrel domain O3Y_02655 PF01746 tRNA (Guanine-1)-methyltransferase O3Y_02660 PF01245 Ribosomal protein L19 O3Y_02665 PF13180 PDZ domain O3Y_02670 PF00595 PDZ domain O3Y_02680 PF03969 AFG1-like ATPase O3Y_02685 PF00572 Ribosomal protein L13 O3Y_02690 PF00380 Ribosomal protein S9/S16 O3Y_02695 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal O3Y_02695 PF00355 Rieske [2Fe-2S] domain O3Y_02700 PF00032 Cytochrome b(C-terminal)/b6/petD O3Y_02700 PF00033 Cytochrome b/b6/petB O3Y_02705 PF02167 Cytochrome C1 family O3Y_02710 PF00043 Glutathione S-transferase, C-terminal domain O3Y_02710 PF02798 Glutathione S-transferase, N-terminal domain O3Y_02715 PF04386 Stringent starvation protein B O3Y_02720 PF04972 BON domain O3Y_02725 PF13580 SIS domain O3Y_02730 PF02021 Uncharacterised protein family UPF0102 O3Y_02735 PF04348 LppC putative lipoprotein O3Y_02740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases O3Y_02745 PF00005 ABC transporter O3Y_02750 PF01061 ABC-2 type transporter O3Y_02755 PF02569 Pantoate-beta-alanine ligase O3Y_02760 PF02548 Ketopantoate hydroxymethyltransferase O3Y_02765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) O3Y_02770 PF12627 Probable RNA and SrmB- binding site of polymerase A O3Y_02770 PF12626 Polymerase A arginine-rich C-terminus O3Y_02770 PF01743 Poly A polymerase head domain O3Y_02775 PF00749 tRNA synthetases class I (E and Q), catalytic domain O3Y_02780 PF01258 Prokaryotic dksA/traR C4-type zinc finger O3Y_02785 PF17746 SfsA N-terminal OB domain O3Y_02785 PF03749 Sugar fermentation stimulation protein RE domain O3Y_02795 PF08482 ATP-dependent helicase C-terminal O3Y_02795 PF00271 Helicase conserved C-terminal domain O3Y_02795 PF04408 Helicase associated domain (HA2) O3Y_02795 PF00270 DEAD/DEAH box helicase O3Y_02800 PF14814 Bifunctional transglycosylase second domain O3Y_02800 PF00912 Transglycosylase O3Y_02800 PF00905 Penicillin binding protein transpeptidase domain O3Y_02805 PF01734 Patatin-like phospholipase O3Y_02810 PF00330 Aconitase family (aconitate hydratase) O3Y_02810 PF11791 Aconitate B N-terminal domain O3Y_02810 PF06434 Aconitate hydratase 2 N-terminus O3Y_02815 PF06062 Uncharacterised protein family (UPF0231) O3Y_02820 PF00543 Nitrogen regulatory protein P-II O3Y_02825 PF00909 Ammonium Transporter Family O3Y_02830 PF13416 Bacterial extracellular solute-binding protein O3Y_02840 PF00005 ABC transporter O3Y_02840 PF08402 TOBE domain O3Y_02845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I O3Y_02845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II O3Y_02845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III O3Y_02845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain O3Y_02850 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain O3Y_02850 PF06165 Glycosyltransferase family 36 O3Y_02855 PF00728 Glycosyl hydrolase family 20, catalytic domain O3Y_02855 PF02838 Glycosyl hydrolase family 20, domain 2 O3Y_02860 PF01869 BadF/BadG/BcrA/BcrD ATPase family O3Y_02870 PF00005 ABC transporter O3Y_02870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_02875 PF00005 ABC transporter O3Y_02875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_02880 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_02880 PF12911 N-terminal TM domain of oligopeptide transport permease C O3Y_02885 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_02890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle O3Y_02895 PF00512 His Kinase A (phospho-acceptor) domain O3Y_02895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_02895 PF00072 Response regulator receiver domain O3Y_02895 PF09308 LuxQ, periplasmic O3Y_02900 PF08468 Methyltransferase small domain N-terminal O3Y_02900 PF05175 Methyltransferase small domain O3Y_02905 PF01594 AI-2E family transporter O3Y_02910 PF00202 Aminotransferase class-III O3Y_02920 PF01521 Iron-sulphur cluster biosynthesis O3Y_02930 PF00873 AcrB/AcrD/AcrF family O3Y_02935 PF01551 Peptidase family M23 O3Y_02935 PF04225 Opacity-associated protein A LysM-like domain O3Y_02940 PF00579 tRNA synthetases class I (W and Y) O3Y_02940 PF01479 S4 domain O3Y_02945 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family O3Y_02950 PF13609 Gram-negative porin O3Y_02955 PF03449 Transcription elongation factor, N-terminal O3Y_02955 PF01272 Transcription elongation factor, GreA/GreB, C-term O3Y_02960 PF01985 CRS1 / YhbY (CRM) domain O3Y_02965 PF01728 FtsJ-like methyltransferase O3Y_02970 PF00004 ATPase family associated with various cellular activities (AAA) O3Y_02970 PF17862 AAA+ lid domain O3Y_02970 PF06480 FtsH Extracellular O3Y_02970 PF01434 Peptidase family M41 O3Y_02975 PF00809 Pterin binding enzyme O3Y_02980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain O3Y_02980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III O3Y_02980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I O3Y_02980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II O3Y_02985 PF03840 Preprotein translocase SecG subunit O3Y_02990 PF02576 RimP N-terminal domain O3Y_02990 PF17384 RimP C-terminal SH3 domain O3Y_02995 PF00575 S1 RNA binding domain O3Y_02995 PF13184 NusA-like KH domain O3Y_02995 PF08529 NusA N-terminal domain O3Y_03000 PF11987 Translation-initiation factor 2 O3Y_03000 PF00009 Elongation factor Tu GTP binding domain O3Y_03000 PF08364 Bacterial translation initiation factor IF-2 associated region O3Y_03000 PF04760 Translation initiation factor IF-2, N-terminal region O3Y_03005 PF02033 Ribosome-binding factor A O3Y_03010 PF16198 tRNA pseudouridylate synthase B C-terminal domain O3Y_03010 PF09157 Pseudouridine synthase II TruB, C-terminal O3Y_03010 PF01509 TruB family pseudouridylate synthase (N terminal domain) O3Y_03015 PF00312 Ribosomal protein S15 O3Y_03020 PF00575 S1 RNA binding domain O3Y_03020 PF00013 KH domain O3Y_03020 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain O3Y_03020 PF03725 3' exoribonuclease family, domain 2 O3Y_03020 PF01138 3' exoribonuclease family, domain 1 O3Y_03025 PF07719 Tetratricopeptide repeat O3Y_03025 PF13181 Tetratricopeptide repeat O3Y_03050 PF00563 EAL domain O3Y_03050 PF00990 Diguanylate cyclase, GGDEF domain O3Y_03050 PF03707 Bacterial signalling protein N terminal repeat O3Y_03060 PF13508 Acetyltransferase (GNAT) domain O3Y_03075 PF00563 EAL domain O3Y_03075 PF03707 Bacterial signalling protein N terminal repeat O3Y_03075 PF00990 Diguanylate cyclase, GGDEF domain O3Y_03080 PF00009 Elongation factor Tu GTP binding domain O3Y_03080 PF03144 Elongation factor Tu domain 2 O3Y_03080 PF16658 Class II release factor RF3, C-terminal domain O3Y_03085 PF00271 Helicase conserved C-terminal domain O3Y_03085 PF00270 DEAD/DEAH box helicase O3Y_03090 PF05175 Methyltransferase small domain O3Y_03095 PF05525 Branched-chain amino acid transport protein O3Y_03100 PF00472 RF-1 domain O3Y_03100 PF03462 PCRF domain O3Y_03105 PF01336 OB-fold nucleic acid binding domain O3Y_03105 PF00152 tRNA synthetases class II (D, K and N) O3Y_03110 PF00158 Sigma-54 interaction domain O3Y_03110 PF02954 Bacterial regulatory protein, Fis family O3Y_03110 PF00072 Response regulator receiver domain O3Y_03120 PF00248 Aldo/keto reductase family O3Y_03125 PF02976 DNA mismatch repair enzyme MutH O3Y_03135 PF00293 NUDIX domain O3Y_03140 PF02896 PEP-utilising enzyme, TIM barrel domain O3Y_03140 PF00391 PEP-utilising enzyme, mobile domain O3Y_03140 PF05524 PEP-utilising enzyme, N-terminal O3Y_03140 PF01590 GAF domain O3Y_03145 PF01925 Sulfite exporter TauE/SafE O3Y_03150 PF01790 Prolipoprotein diacylglyceryl transferase O3Y_03155 PF00303 Thymidylate synthase O3Y_03160 PF02690 Na+/Pi-cotransporter O3Y_03165 PF03466 LysR substrate binding domain O3Y_03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_03170 PF01022 Bacterial regulatory protein, arsR family O3Y_03175 PF01649 Ribosomal protein S20 O3Y_03180 PF03023 Lipid II flippase MurJ O3Y_03185 PF01687 Riboflavin kinase O3Y_03185 PF06574 FAD synthetase O3Y_03190 PF06827 Zinc finger found in FPG and IleRS O3Y_03190 PF08264 Anticodon-binding domain of tRNA O3Y_03190 PF00133 tRNA synthetases class I (I, L, M and V) O3Y_03195 PF01252 Signal peptidase (SPase) II O3Y_03200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase O3Y_03205 PF02401 LytB protein O3Y_03210 PF02554 Carbon starvation protein CstA O3Y_03225 PF13580 SIS domain O3Y_03230 PF03702 Anhydro-N-acetylmuramic acid kinase O3Y_03235 PF00933 Glycosyl hydrolase family 3 N terminal domain O3Y_03240 PF04397 LytTr DNA-binding domain O3Y_03240 PF00072 Response regulator receiver domain O3Y_03245 PF07694 5TMR of 5TMR-LYT O3Y_03245 PF06580 Histidine kinase O3Y_03250 PF00793 DAHP synthetase I family O3Y_03255 PF01817 Chorismate mutase type II O3Y_03255 PF02153 Prephenate dehydrogenase O3Y_03260 PF07238 PilZ domain O3Y_03265 PF12848 ABC transporter O3Y_03265 PF00005 ABC transporter O3Y_03270 PF01464 Transglycosylase SLT domain O3Y_03270 PF14718 Soluble lytic murein transglycosylase L domain O3Y_03275 PF01371 Trp repressor protein O3Y_03280 PF01931 Protein of unknown function DUF84 O3Y_03285 PF00990 Diguanylate cyclase, GGDEF domain O3Y_03285 PF00563 EAL domain O3Y_03290 PF13416 Bacterial extracellular solute-binding protein O3Y_03295 PF00800 Prephenate dehydratase O3Y_03295 PF01817 Chorismate mutase type II O3Y_03300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein O3Y_03305 PF13525 Outer membrane lipoprotein O3Y_03310 PF00849 RNA pseudouridylate synthase O3Y_03310 PF01479 S4 domain O3Y_03320 PF00004 ATPase family associated with various cellular activities (AAA) O3Y_03320 PF17871 AAA lid domain O3Y_03320 PF10431 C-terminal, D2-small domain, of ClpB protein O3Y_03320 PF07724 AAA domain (Cdc48 subfamily) O3Y_03320 PF02861 Clp amino terminal domain, pathogenicity island component O3Y_03330 PF00881 Nitroreductase family O3Y_03335 PF00037 4Fe-4S binding domain O3Y_03345 PF04381 Putative exonuclease, RdgC O3Y_03350 PF00072 Response regulator receiver domain O3Y_03350 PF00486 Transcriptional regulatory protein, C terminal O3Y_03355 PF11808 Phosphate regulon sensor protein PhoR O3Y_03355 PF00989 PAS fold O3Y_03355 PF00512 His Kinase A (phospho-acceptor) domain O3Y_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_03360 PF12849 PBP superfamily domain O3Y_03365 PF02541 Ppx/GppA phosphatase family O3Y_03380 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_03385 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_03390 PF00005 ABC transporter O3Y_03395 PF01895 PhoU domain O3Y_03400 PF03976 Polyphosphate kinase 2 (PPK2) O3Y_03405 PF03932 CutC family O3Y_03410 PF10417 C-terminal domain of 1-Cys peroxiredoxin O3Y_03410 PF00578 AhpC/TSA family O3Y_03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_03415 PF03466 LysR substrate binding domain O3Y_03420 PF01274 Malate synthase O3Y_03425 PF00463 Isocitrate lyase family O3Y_03430 PF00571 CBS domain O3Y_03435 PF02547 Queuosine biosynthesis protein O3Y_03440 PF01702 Queuine tRNA-ribosyltransferase O3Y_03445 PF02699 Preprotein translocase subunit O3Y_03450 PF13721 SecD export protein N-terminal TM region O3Y_03450 PF02355 Protein export membrane protein O3Y_03450 PF07549 SecD/SecF GG Motif O3Y_03455 PF02355 Protein export membrane protein O3Y_03455 PF07549 SecD/SecF GG Motif O3Y_03460 PF00459 Inositol monophosphatase family O3Y_03465 PF00588 SpoU rRNA Methylase family O3Y_03470 PF02082 Transcriptional regulator O3Y_03475 PF00266 Aminotransferase class-V O3Y_03480 PF01592 NifU-like N terminal domain O3Y_03485 PF01521 Iron-sulphur cluster biosynthesis O3Y_03490 PF00226 DnaJ domain O3Y_03490 PF07743 HSCB C-terminal oligomerisation domain O3Y_03495 PF00012 Hsp70 protein O3Y_03500 PF00111 2Fe-2S iron-sulfur cluster binding domain O3Y_03505 PF04384 Iron-sulphur cluster assembly O3Y_03510 PF00883 Cytosol aminopeptidase family, catalytic domain O3Y_03510 PF12404 Peptidase O3Y_03515 PF00334 Nucleoside diphosphate kinase O3Y_03520 PF04055 Radical SAM superfamily O3Y_03525 PF13464 Domain of unknown function (DUF4115) O3Y_03530 PF04551 GcpE protein O3Y_03535 PF13393 Histidyl-tRNA synthetase O3Y_03535 PF03129 Anticodon binding domain O3Y_03540 PF09976 Tetratricopeptide repeat-like domain O3Y_03545 PF13360 PQQ-like domain O3Y_03550 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal O3Y_03550 PF01926 50S ribosome-binding GTPase O3Y_03565 PF02601 Exonuclease VII, large subunit O3Y_03565 PF13742 OB-fold nucleic acid binding domain O3Y_03570 PF00478 IMP dehydrogenase / GMP reductase domain O3Y_03570 PF00571 CBS domain O3Y_03575 PF00117 Glutamine amidotransferase class-I O3Y_03575 PF02540 NAD synthase O3Y_03575 PF00958 GMP synthase C terminal domain O3Y_03580 PF06483 Chitinase C O3Y_03580 PF00704 Glycosyl hydrolases family 18 O3Y_03585 PF01184 GPR1/FUN34/yaaH family O3Y_03590 PF00857 Isochorismatase family O3Y_03590 PF00550 Phosphopantetheine attachment site O3Y_03595 PF13193 AMP-binding enzyme C-terminal domain O3Y_03595 PF00501 AMP-binding enzyme O3Y_03600 PF00425 chorismate binding enzyme O3Y_03615 PF01497 Periplasmic binding protein O3Y_03620 PF01032 FecCD transport family O3Y_03625 PF01032 FecCD transport family O3Y_03630 PF00005 ABC transporter O3Y_03635 PF17837 4'-phosphopantetheinyl transferase N-terminal domain O3Y_03635 PF01648 4'-phosphopantetheinyl transferase superfamily O3Y_03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_03640 PF03466 LysR substrate binding domain O3Y_03645 PF14864 Alkyl sulfatase C-terminal O3Y_03645 PF14863 Alkyl sulfatase dimerisation O3Y_03645 PF00753 Metallo-beta-lactamase superfamily O3Y_03650 PF01235 Sodium:alanine symporter family O3Y_03655 PF01266 FAD dependent oxidoreductase O3Y_03660 PF03466 LysR substrate binding domain O3Y_03660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_03675 PF00072 Response regulator receiver domain O3Y_03675 PF12431 Transcriptional regulator O3Y_03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_03680 PF17203 Single cache domain 3 O3Y_03685 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit O3Y_03690 PF00364 Biotin-requiring enzyme O3Y_03690 PF02436 Conserved carboxylase domain O3Y_03690 PF00682 HMGL-like O3Y_03695 PF04277 Oxaloacetate decarboxylase, gamma chain O3Y_03700 PF03390 2-hydroxycarboxylate transporter family O3Y_03705 PF08218 Citrate lyase ligase C-terminal domain O3Y_03710 PF06857 Malonate decarboxylase delta subunit (MdcD) O3Y_03715 PF03328 HpcH/HpaI aldolase/citrate lyase family O3Y_03720 PF04223 Citrate lyase, alpha subunit (CitF) O3Y_03725 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase O3Y_03730 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase O3Y_03740 PF08032 RNA 2'-O ribose methyltransferase substrate binding O3Y_03740 PF00588 SpoU rRNA Methylase family O3Y_03745 PF00037 4Fe-4S binding domain O3Y_03745 PF11953 Domain of unknown function (DUF3470) O3Y_03800 PF13737 Transposase DDE domain O3Y_03805 PF13737 Transposase DDE domain O3Y_03810 PF00171 Aldehyde dehydrogenase family O3Y_03815 PF00041 Fibronectin type III domain O3Y_03815 PF12561 ToxR activated gene A lipoprotein domain O3Y_03830 PF08534 Redoxin O3Y_03835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_03840 PF00486 Transcriptional regulatory protein, C terminal O3Y_03850 PF07963 Prokaryotic N-terminal methylation motif O3Y_03850 PF05946 Toxin-coregulated pilus subunit TcpA O3Y_03860 PF10671 Toxin co-regulated pilus biosynthesis protein Q O3Y_03880 PF17456 Toxin-coregulated pilus protein S O3Y_03885 PF00437 Type II/IV secretion system protein O3Y_03890 PF00482 Type II secretion system (T2SS), protein F O3Y_03895 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F O3Y_03900 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family O3Y_03905 PF01478 Type IV leader peptidase family O3Y_03905 PF06750 Bacterial Peptidase A24 N-terminal domain O3Y_03910 PF02743 Cache domain O3Y_03910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_03910 PF00672 HAMP domain O3Y_03925 PF01551 Peptidase family M23 O3Y_03925 PF04225 Opacity-associated protein A LysM-like domain O3Y_03935 PF13322 Domain of unknown function (DUF4092) O3Y_03935 PF13402 Peptidase M60, enhancin and enhancin-like O3Y_03935 PF17291 N-terminal domain of M60-like peptidases O3Y_03945 PF13356 Arm DNA-binding domain O3Y_03945 PF00589 Phage integrase family O3Y_03950 PF01668 SmpB protein O3Y_03955 PF03364 Polyketide cyclase / dehydrase and lipid transport O3Y_03960 PF03658 RnfH family Ubiquitin O3Y_03965 PF04355 SmpA / OmlA family O3Y_03970 PF02463 RecF/RecN/SMC N terminal domain O3Y_03975 PF01513 ATP-NAD kinase O3Y_03980 PF01025 GrpE O3Y_03985 PF00012 Hsp70 protein O3Y_03990 PF00226 DnaJ domain O3Y_03990 PF00684 DnaJ central domain O3Y_03990 PF01556 DnaJ C terminal domain O3Y_03995 PF07963 Prokaryotic N-terminal methylation motif O3Y_03995 PF00114 Pilin (bacterial filament) O3Y_04020 PF03806 AbgT putative transporter family O3Y_04025 PF14437 MafB19-like deaminase O3Y_04035 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_04035 PF01464 Transglycosylase SLT domain O3Y_04045 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal O3Y_04045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain O3Y_04045 PF02769 AIR synthase related protein, C-terminal domain O3Y_04050 PF01797 Transposase IS200 like O3Y_04060 PF06786 Uncharacterised protein family (UPF0253) O3Y_04070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) O3Y_04070 PF03129 Anticodon binding domain O3Y_04070 PF04073 Aminoacyl-tRNA editing domain O3Y_04075 PF18389 TrmO C-terminal domain O3Y_04075 PF01980 tRNA-methyltransferase O O3Y_04080 PF01197 Ribosomal protein L31 O3Y_04085 PF00444 Ribosomal protein L36 O3Y_04090 PF03806 AbgT putative transporter family O3Y_04095 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 O3Y_04105 PF13302 Acetyltransferase (GNAT) domain O3Y_04120 PF04287 tRNA pseudouridine synthase C O3Y_04125 PF00849 RNA pseudouridylate synthase O3Y_04130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase O3Y_04130 PF02779 Transketolase, pyrimidine binding domain O3Y_04130 PF02780 Transketolase, C-terminal domain O3Y_04135 PF00348 Polyprenyl synthetase O3Y_04140 PF02609 Exonuclease VII small subunit O3Y_04145 PF01618 MotA/TolQ/ExbB proton channel family O3Y_04150 PF00691 OmpA family O3Y_04150 PF13677 Membrane MotB of proton-channel complex MotA/MotB O3Y_04155 PF02568 Thiamine biosynthesis protein (ThiI) O3Y_04155 PF02926 THUMP domain O3Y_04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_04160 PF03466 LysR substrate binding domain O3Y_04165 PF04241 Protein of unknown function (DUF423) O3Y_04170 PF01367 5'-3' exonuclease, C-terminal SAM fold O3Y_04170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain O3Y_04175 PF03641 Possible lysine decarboxylase O3Y_04175 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases O3Y_04175 PF11892 Domain of unknown function (DUF3412) O3Y_04180 PF00990 Diguanylate cyclase, GGDEF domain O3Y_04190 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term O3Y_04190 PF14489 QueF-like protein O3Y_04195 PF07348 Syd protein (SUKH-2) O3Y_04200 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) O3Y_04205 PF03180 NLPA lipoprotein O3Y_04210 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_04215 PF00005 ABC transporter O3Y_04215 PF09383 NIL domain O3Y_04225 PF00356 Bacterial regulatory proteins, lacI family O3Y_04230 PF02378 Phosphotransferase system, EIIC O3Y_04230 PF00367 phosphotransferase system, EIIB O3Y_04235 PF00128 Alpha amylase, catalytic domain O3Y_04235 PF16657 Maltogenic Amylase, C-terminal domain O3Y_04245 PF13533 Biotin-lipoyl like O3Y_04250 PF00873 AcrB/AcrD/AcrF family O3Y_04255 PF01451 Low molecular weight phosphotyrosine protein phosphatase O3Y_04260 PF02350 UDP-N-acetylglucosamine 2-epimerase O3Y_04265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain O3Y_04265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain O3Y_04265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain O3Y_04270 PF14602 Hexapeptide repeat of succinyl-transferase O3Y_04270 PF12464 Maltose acetyltransferase O3Y_04290 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_04300 PF00862 Sucrose synthase O3Y_04300 PF00534 Glycosyl transferases group 1 O3Y_04310 PF03808 Glycosyl transferase WecB/TagA/CpsF family O3Y_04325 PF17945 Beta/Gamma crystallin O3Y_04325 PF12561 ToxR activated gene A lipoprotein domain O3Y_04340 PF02397 Bacterial sugar transferase O3Y_04350 PF10531 SLBB domain O3Y_04350 PF02563 Polysaccharide biosynthesis/export protein O3Y_04350 PF18412 Outer-membrane lipoprotein Wza C-terminal domain O3Y_04355 PF13807 G-rich domain on putative tyrosine kinase O3Y_04355 PF13614 AAA domain O3Y_04355 PF02706 Chain length determinant protein O3Y_04375 PF00464 Serine hydroxymethyltransferase O3Y_04385 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family O3Y_04385 PF04055 Radical SAM superfamily O3Y_04390 PF03099 Biotin/lipoate A/B protein ligase family O3Y_04395 PF04359 Protein of unknown function (DUF493) O3Y_04400 PF07943 Penicillin-binding protein 5, C-terminal domain O3Y_04400 PF00768 D-alanyl-D-alanine carboxypeptidase O3Y_04405 PF05036 Sporulation related domain O3Y_04405 PF03330 Lytic transglycolase O3Y_04410 PF01098 Cell cycle protein O3Y_04415 PF03717 Penicillin-binding Protein dimerisation domain O3Y_04415 PF00905 Penicillin binding protein transpeptidase domain O3Y_04420 PF02590 Predicted SPOUT methyltransferase O3Y_04430 PF14840 Processivity clamp loader gamma complex DNA pol III C-term O3Y_04430 PF06144 DNA polymerase III, delta subunit O3Y_04435 PF04390 Lipopolysaccharide-assembly O3Y_04440 PF13603 Leucyl-tRNA synthetase, Domain 2 O3Y_04440 PF00133 tRNA synthetases class I (I, L, M and V) O3Y_04440 PF08264 Anticodon-binding domain of tRNA O3Y_04445 PF07295 Zinc-ribbon containing domain O3Y_04450 PF00795 Carbon-nitrogen hydrolase O3Y_04455 PF03471 Transporter associated domain O3Y_04455 PF00571 CBS domain O3Y_04460 PF02130 Uncharacterized protein family UPF0054 O3Y_04465 PF02562 PhoH-like protein O3Y_04470 PF00919 Uncharacterized protein family UPF0004 O3Y_04470 PF04055 Radical SAM superfamily O3Y_04470 PF01938 TRAM domain O3Y_04475 PF01494 FAD binding domain O3Y_04480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 O3Y_04485 PF00391 PEP-utilising enzyme, mobile domain O3Y_04485 PF05524 PEP-utilising enzyme, N-terminal O3Y_04485 PF02896 PEP-utilising enzyme, TIM barrel domain O3Y_04490 PF00381 PTS HPr component phosphorylation site O3Y_04495 PF00291 Pyridoxal-phosphate dependent enzyme O3Y_04505 PF04354 ZipA, C-terminal FtsZ-binding domain O3Y_04510 PF01653 NAD-dependent DNA ligase adenylation domain O3Y_04510 PF03119 NAD-dependent DNA ligase C4 zinc finger domain O3Y_04510 PF03120 NAD-dependent DNA ligase OB-fold domain O3Y_04510 PF12826 Helix-hairpin-helix motif O3Y_04510 PF00533 BRCA1 C Terminus (BRCT) domain O3Y_04515 PF13609 Gram-negative porin O3Y_04525 PF13411 MerR HTH family regulatory protein O3Y_04530 PF01957 NfeD-like C-terminal, partner-binding O3Y_04535 PF16200 C-terminal region of band_7 O3Y_04535 PF01145 SPFH domain / Band 7 family O3Y_04540 PF00085 Thioredoxin O3Y_04545 PF00106 short chain dehydrogenase O3Y_04550 PF08338 Domain of unknown function (DUF1731) O3Y_04550 PF01370 NAD dependent epimerase/dehydratase family O3Y_04555 PF12850 Calcineurin-like phosphoesterase superfamily domain O3Y_04565 PF17323 Trans-membrane regulatory protein ToxS O3Y_04570 PF00486 Transcriptional regulatory protein, C terminal O3Y_04575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_04575 PF00183 Hsp90 protein O3Y_04580 PF05191 Adenylate kinase, active site lid O3Y_04585 PF00762 Ferrochelatase O3Y_04590 PF00854 POT family O3Y_04595 PF02357 Transcription termination factor nusG O3Y_04600 PF00733 Asparagine synthase O3Y_04600 PF13537 Glutamine amidotransferase domain O3Y_04605 PF02254 TrkA-N domain O3Y_04605 PF00999 Sodium/hydrogen exchanger family O3Y_04610 PF01047 MarR family O3Y_04610 PF00480 ROK family O3Y_04615 PF01979 Amidohydrolase family O3Y_04620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 O3Y_04620 PF00367 phosphotransferase system, EIIB O3Y_04620 PF02378 Phosphotransferase system, EIIC O3Y_04625 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain O3Y_04625 PF00749 tRNA synthetases class I (E and Q), catalytic domain O3Y_04635 PF01416 tRNA pseudouridine synthase O3Y_04640 PF17848 Acetyl-coA carboxylase zinc finger domain O3Y_04640 PF01039 Carboxyl transferase domain O3Y_04645 PF08245 Mur ligase middle domain O3Y_04645 PF02875 Mur ligase family, glutamate ligase domain O3Y_04650 PF05036 Sporulation related domain O3Y_04655 PF02674 Colicin V production protein O3Y_04660 PF00156 Phosphoribosyl transferase domain O3Y_04665 PF13726 Na+-H+ antiporter family O3Y_04665 PF03553 Na+/H+ antiporter family O3Y_04670 PF00929 Exonuclease O3Y_04680 PF18393 MotY N-terminal domain O3Y_04680 PF00691 OmpA family O3Y_04685 PF10952 Protein of unknown function (DUF2753) O3Y_04690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_04695 PF00730 HhH-GPD superfamily base excision DNA repair protein O3Y_04695 PF00633 Helix-hairpin-helix motif O3Y_04695 PF10576 Iron-sulfur binding domain of endonuclease III O3Y_04700 PF02508 Rnf-Nqr subunit, membrane protein O3Y_04705 PF04205 FMN-binding domain O3Y_04710 PF03116 NQR2, RnfD, RnfE family O3Y_04715 PF12838 4Fe-4S dicluster domain O3Y_04715 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit O3Y_04715 PF10531 SLBB domain O3Y_04715 PF13375 RnfC Barrel sandwich hybrid domain O3Y_04720 PF04060 Putative Fe-S cluster O3Y_04725 PF02508 Rnf-Nqr subunit, membrane protein O3Y_04730 PF12344 Ultra-violet resistance protein B O3Y_04730 PF04851 Type III restriction enzyme, res subunit O3Y_04730 PF00271 Helicase conserved C-terminal domain O3Y_04730 PF17757 UvrB interaction domain O3Y_04730 PF02151 UvrB/uvrC motif O3Y_04735 PF02954 Bacterial regulatory protein, Fis family O3Y_04735 PF00158 Sigma-54 interaction domain O3Y_04735 PF00072 Response regulator receiver domain O3Y_04740 PF01627 Hpt domain O3Y_04745 PF01933 Uncharacterised protein family UPF0052 O3Y_04750 PF04055 Radical SAM superfamily O3Y_04750 PF06463 Molybdenum Cofactor Synthesis C O3Y_04755 PF00994 Probable molybdopterin binding domain O3Y_04760 PF01967 MoaC family O3Y_04765 PF02597 ThiS family O3Y_04770 PF02391 MoaE protein O3Y_04775 PF07694 5TMR of 5TMR-LYT O3Y_04775 PF00990 Diguanylate cyclase, GGDEF domain O3Y_04780 PF00392 Bacterial regulatory proteins, gntR family O3Y_04780 PF07085 DRTGG domain O3Y_04780 PF00571 CBS domain O3Y_04780 PF03061 Thioesterase superfamily O3Y_04785 PF00403 Heavy-metal-associated domain O3Y_04790 PF01048 Phosphorylase superfamily O3Y_04800 PF01588 Putative tRNA binding domain O3Y_04800 PF09334 tRNA synthetases class I (M) O3Y_04805 PF10609 NUBPL iron-transfer P-loop NTPase O3Y_04815 PF00485 Phosphoribulokinase / Uridine kinase family O3Y_04820 PF05170 AsmA family O3Y_04825 PF12557 Cob(I)alamin adenosyltransferase N terminal O3Y_04825 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP O3Y_04830 PF01451 Low molecular weight phosphotyrosine protein phosphatase O3Y_04835 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) O3Y_04840 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) O3Y_04850 PF08281 Sigma-70, region 4 O3Y_04850 PF04542 Sigma-70 region 2 O3Y_04855 PF02803 Thiolase, C-terminal domain O3Y_04855 PF00108 Thiolase, N-terminal domain O3Y_04860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain O3Y_04860 PF00378 Enoyl-CoA hydratase/isomerase O3Y_04860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain O3Y_04865 PF00881 Nitroreductase family O3Y_04870 PF03466 LysR substrate binding domain O3Y_04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_04875 PF00072 Response regulator receiver domain O3Y_04890 PF00156 Phosphoribosyl transferase domain O3Y_04895 PF12170 DNA polymerase III tau subunit V interacting with alpha O3Y_04895 PF12169 DNA polymerase III subunits gamma and tau domain III O3Y_04895 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding O3Y_04900 PF02575 YbaB/EbfC DNA-binding family O3Y_04905 PF13662 Toprim domain O3Y_04905 PF02132 RecR protein O3Y_04910 PF03692 Putative zinc- or iron-chelating domain O3Y_04915 PF03692 Putative zinc- or iron-chelating domain O3Y_04920 PF00106 short chain dehydrogenase O3Y_04925 PF08496 Peptidase family S49 N-terminal O3Y_04925 PF01343 Peptidase family S49 O3Y_04930 PF00291 Pyridoxal-phosphate dependent enzyme O3Y_04935 PF13404 AsnC-type helix-turn-helix domain O3Y_04935 PF01037 Lrp/AsnC ligand binding domain O3Y_04950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain O3Y_04960 PF08448 PAS fold O3Y_04960 PF00990 Diguanylate cyclase, GGDEF domain O3Y_04970 PF01022 Bacterial regulatory protein, arsR family O3Y_04975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain O3Y_04975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain O3Y_04990 PF00704 Glycosyl hydrolases family 18 O3Y_04990 PF06483 Chitinase C O3Y_05000 PF01161 Phosphatidylethanolamine-binding protein O3Y_05020 PF01300 Telomere recombination O3Y_05020 PF03481 Putative GTP-binding controlling metal-binding O3Y_05035 PF00072 Response regulator receiver domain O3Y_05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_05045 PF13426 PAS domain O3Y_05045 PF00512 His Kinase A (phospho-acceptor) domain O3Y_05045 PF13188 PAS domain O3Y_05045 PF00989 PAS fold O3Y_05050 PF00512 His Kinase A (phospho-acceptor) domain O3Y_05050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_05055 PF03707 Bacterial signalling protein N terminal repeat O3Y_05055 PF00990 Diguanylate cyclase, GGDEF domain O3Y_05055 PF00563 EAL domain O3Y_05055 PF13188 PAS domain O3Y_05060 PF02954 Bacterial regulatory protein, Fis family O3Y_05060 PF00072 Response regulator receiver domain O3Y_05060 PF00158 Sigma-54 interaction domain O3Y_05065 PF13188 PAS domain O3Y_05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_05065 PF00072 Response regulator receiver domain O3Y_05065 PF08448 PAS fold O3Y_05065 PF00512 His Kinase A (phospho-acceptor) domain O3Y_05075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle O3Y_05080 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_05085 PF12911 N-terminal TM domain of oligopeptide transport permease C O3Y_05085 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_05090 PF00005 ABC transporter O3Y_05090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_05095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_05095 PF00005 ABC transporter O3Y_05100 PF13409 Glutathione S-transferase, N-terminal domain O3Y_05105 PF07085 DRTGG domain O3Y_05105 PF01515 Phosphate acetyl/butaryl transferase O3Y_05110 PF00871 Acetokinase family O3Y_05115 PF04217 Protein of unknown function, DUF412 O3Y_05120 PF09905 DNA-binding protein VF530 O3Y_05130 PF02653 Branched-chain amino acid transport system / permease component O3Y_05135 PF00005 ABC transporter O3Y_05140 PF00990 Diguanylate cyclase, GGDEF domain O3Y_05145 PF01207 Dihydrouridine synthase (Dus) O3Y_05150 PF07516 SecA Wing and Scaffold domain O3Y_05150 PF07517 SecA DEAD-like domain O3Y_05150 PF02810 SEC-C motif O3Y_05150 PF01043 SecA preprotein cross-linking domain O3Y_05155 PF03548 Outer membrane lipoprotein carrier protein LolA O3Y_05160 PF00004 ATPase family associated with various cellular activities (AAA) O3Y_05160 PF12002 MgsA AAA+ ATPase C terminal O3Y_05160 PF16193 AAA C-terminal domain O3Y_05165 PF02403 Seryl-tRNA synthetase N-terminal domain O3Y_05165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) O3Y_05170 PF00202 Aminotransferase class-III O3Y_05175 PF04055 Radical SAM superfamily O3Y_05175 PF06968 Biotin and Thiamin Synthesis associated domain O3Y_05180 PF00155 Aminotransferase class I and II O3Y_05185 PF08241 Methyltransferase domain O3Y_05200 PF01435 Peptidase family M48 O3Y_05210 PF00106 short chain dehydrogenase O3Y_05235 PF16036 Chalcone isomerase-like O3Y_05245 PF08328 Adenylosuccinate lyase C-terminal O3Y_05245 PF00206 Lyase O3Y_05250 PF04356 Protein of unknown function (DUF489) O3Y_05260 PF00294 pfkB family carbohydrate kinase O3Y_05265 PF00816 H-NS histone family O3Y_05270 PF03553 Na+/H+ antiporter family O3Y_05275 PF01634 ATP phosphoribosyltransferase O3Y_05275 PF08029 HisG, C-terminal domain O3Y_05280 PF00815 Histidinol dehydrogenase O3Y_05285 PF00155 Aminotransferase class I and II O3Y_05290 PF08645 Polynucleotide kinase 3 phosphatase O3Y_05290 PF00475 Imidazoleglycerol-phosphate dehydratase O3Y_05295 PF00117 Glutamine amidotransferase class-I O3Y_05300 PF00977 Histidine biosynthesis protein O3Y_05305 PF00977 Histidine biosynthesis protein O3Y_05310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase O3Y_05310 PF01502 Phosphoribosyl-AMP cyclohydrolase O3Y_05315 PF00849 RNA pseudouridylate synthase O3Y_05320 PF03971 Monomeric isocitrate dehydrogenase O3Y_05325 PF00313 'Cold-shock' DNA-binding domain O3Y_05330 PF02617 ATP-dependent Clp protease adaptor protein ClpS O3Y_05335 PF10431 C-terminal, D2-small domain, of ClpB protein O3Y_05335 PF02861 Clp amino terminal domain, pathogenicity island component O3Y_05335 PF17871 AAA lid domain O3Y_05335 PF07724 AAA domain (Cdc48 subfamily) O3Y_05335 PF00004 ATPase family associated with various cellular activities (AAA) O3Y_05340 PF06826 Predicted Permease Membrane Region O3Y_05340 PF02080 TrkA-C domain O3Y_05345 PF00462 Glutaredoxin O3Y_05350 PF00465 Iron-containing alcohol dehydrogenase O3Y_05350 PF00171 Aldehyde dehydrogenase family O3Y_05355 PF01380 SIS domain O3Y_05355 PF01418 Helix-turn-helix domain, rpiR family O3Y_05360 PF00282 Pyridoxal-dependent decarboxylase conserved domain O3Y_05370 PF03956 Lysine exporter LysO O3Y_05380 PF04994 TfoX C-terminal domain O3Y_05380 PF04993 TfoX N-terminal domain O3Y_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_05395 PF00512 His Kinase A (phospho-acceptor) domain O3Y_05395 PF00989 PAS fold O3Y_05405 PF00266 Aminotransferase class-V O3Y_05420 PF18030 RimK PreATP-grasp domain O3Y_05420 PF08443 RimK-like ATP-grasp domain O3Y_05425 PF08003 Protein of unknown function (DUF1698) O3Y_05430 PF13649 Methyltransferase domain O3Y_05435 PF01904 Protein of unknown function DUF72 O3Y_05440 PF01336 OB-fold nucleic acid binding domain O3Y_05440 PF02938 GAD domain O3Y_05440 PF00152 tRNA synthetases class II (D, K and N) O3Y_05445 PF00265 Thymidine kinase O3Y_05450 PF00375 Sodium:dicarboxylate symporter family O3Y_05455 PF00290 Tryptophan synthase alpha chain O3Y_05460 PF00291 Pyridoxal-phosphate dependent enzyme O3Y_05465 PF00218 Indole-3-glycerol phosphate synthase O3Y_05465 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase O3Y_05470 PF00591 Glycosyl transferase family, a/b domain O3Y_05470 PF02885 Glycosyl transferase family, helical bundle domain O3Y_05475 PF00117 Glutamine amidotransferase class-I O3Y_05480 PF00425 chorismate binding enzyme O3Y_05480 PF04715 Anthranilate synthase component I, N terminal region O3Y_05485 PF08056 Tryptophan operon leader peptide O3Y_05490 PF02811 PHP domain O3Y_05495 PF01300 Telomere recombination O3Y_05500 PF01479 S4 domain O3Y_05500 PF00849 RNA pseudouridylate synthase O3Y_05505 PF00664 ABC transporter transmembrane region O3Y_05505 PF00005 ABC transporter O3Y_05510 PF00664 ABC transporter transmembrane region O3Y_05510 PF00005 ABC transporter O3Y_05515 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_05525 PF00266 Aminotransferase class-V O3Y_05530 PF08448 PAS fold O3Y_05530 PF00990 Diguanylate cyclase, GGDEF domain O3Y_05535 PF02698 DUF218 domain O3Y_05545 PF03949 Malic enzyme, NAD binding domain O3Y_05545 PF00390 Malic enzyme, N-terminal domain O3Y_05555 PF01259 SAICAR synthetase O3Y_05575 PF00691 OmpA family O3Y_05575 PF13488 Glycine zipper O3Y_05590 PF13183 4Fe-4S dicluster domain O3Y_05590 PF01565 FAD binding domain O3Y_05590 PF02913 FAD linked oxidases, C-terminal domain O3Y_05595 PF04191 Phospholipid methyltransferase O3Y_05600 PF00089 Trypsin O3Y_05610 PF00221 Aromatic amino acid lyase O3Y_05615 PF17391 Urocanase N-terminal domain O3Y_05615 PF17392 Urocanase C-terminal domain O3Y_05615 PF01175 Urocanase Rossmann-like domain O3Y_05620 PF00491 Arginase family O3Y_05625 PF01979 Amidohydrolase family O3Y_05630 PF00392 Bacterial regulatory proteins, gntR family O3Y_05630 PF07702 UTRA domain O3Y_05640 PF04269 Protein of unknown function, DUF440 O3Y_05645 PF09285 Elongation factor P, C-terminal O3Y_05645 PF08207 Elongation factor P (EF-P) KOW-like domain O3Y_05645 PF01132 Elongation factor P (EF-P) OB domain O3Y_05655 PF00563 EAL domain O3Y_05655 PF00990 Diguanylate cyclase, GGDEF domain O3Y_05655 PF13426 PAS domain O3Y_05660 PF00136 DNA polymerase family B O3Y_05660 PF03104 DNA polymerase family B, exonuclease domain O3Y_05665 PF00196 Bacterial regulatory proteins, luxR family O3Y_05665 PF00072 Response regulator receiver domain O3Y_05670 PF08459 UvrC Helix-hairpin-helix N-terminal O3Y_05670 PF01541 GIY-YIG catalytic domain O3Y_05670 PF02151 UvrB/uvrC motif O3Y_05675 PF01066 CDP-alcohol phosphatidyltransferase O3Y_05680 PF00072 Response regulator receiver domain O3Y_05680 PF00990 Diguanylate cyclase, GGDEF domain O3Y_05690 PF01409 tRNA synthetases class II core domain (F) O3Y_05690 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain O3Y_05695 PF03483 B3/4 domain O3Y_05695 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain O3Y_05695 PF01588 Putative tRNA binding domain O3Y_05695 PF03147 Ferredoxin-fold anticodon binding domain O3Y_05695 PF03484 tRNA synthetase B5 domain O3Y_05700 PF00216 Bacterial DNA-binding protein O3Y_05715 PF05724 Thiopurine S-methyltransferase (TPMT) O3Y_05720 PF02222 ATP-grasp domain O3Y_05730 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region O3Y_05730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region O3Y_05735 PF04172 LrgB-like family O3Y_05740 PF03788 LrgA family O3Y_05745 PF08411 Exonuclease C-terminal O3Y_05745 PF00929 Exonuclease O3Y_05755 PF01641 SelR domain O3Y_05760 PF02277 Phosphoribosyltransferase O3Y_05765 PF02654 Cobalamin-5-phosphate synthase O3Y_05770 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase O3Y_05780 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family O3Y_05785 PF01032 FecCD transport family O3Y_05790 PF00005 ABC transporter O3Y_05805 PF17200 Single Cache domain 2 O3Y_05805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_05805 PF00672 HAMP domain O3Y_05820 PF00994 Probable molybdopterin binding domain O3Y_05825 PF00111 2Fe-2S iron-sulfur cluster binding domain O3Y_05825 PF00970 Oxidoreductase FAD-binding domain O3Y_05825 PF00175 Oxidoreductase NAD-binding domain O3Y_05830 PF00268 Ribonucleotide reductase, small chain O3Y_05835 PF02867 Ribonucleotide reductase, barrel domain O3Y_05835 PF00317 Ribonucleotide reductase, all-alpha domain O3Y_05835 PF03477 ATP cone domain O3Y_05845 PF00521 DNA gyrase/topoisomerase IV, subunit A O3Y_05845 PF03989 DNA gyrase C-terminal domain, beta-propeller O3Y_05860 PF07690 Major Facilitator Superfamily O3Y_05870 PF00925 GTP cyclohydrolase II O3Y_05895 PF03734 L,D-transpeptidase catalytic domain O3Y_05895 PF01471 Putative peptidoglycan binding domain O3Y_05900 PF05951 Bacterial protein of unknown function (DUF882) O3Y_05905 PF00753 Metallo-beta-lactamase superfamily O3Y_05920 PF03480 Bacterial extracellular solute-binding protein, family 7 O3Y_05930 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component O3Y_05935 PF07730 Histidine kinase O3Y_05935 PF17200 Single Cache domain 2 O3Y_05940 PF00196 Bacterial regulatory proteins, luxR family O3Y_05940 PF00072 Response regulator receiver domain O3Y_05945 PF01047 MarR family O3Y_05950 PF02028 BCCT, betaine/carnitine/choline family transporter O3Y_05955 PF01522 Polysaccharide deacetylase O3Y_05960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit O3Y_05965 PF02378 Phosphotransferase system, EIIC O3Y_05970 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit O3Y_05975 PF11975 Family 4 glycosyl hydrolase C-terminal domain O3Y_05975 PF02056 Family 4 glycosyl hydrolase O3Y_05980 PF04794 YdjC-like protein O3Y_05985 PF00356 Bacterial regulatory proteins, lacI family O3Y_05990 PF13506 Glycosyl transferase family 21 O3Y_05995 PF04349 Periplasmic glucan biosynthesis protein, MdoG O3Y_06000 PF00672 HAMP domain O3Y_06000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_06000 PF17200 Single Cache domain 2 O3Y_06015 PF00155 Aminotransferase class I and II O3Y_06030 PF08543 Phosphomethylpyrimidine kinase O3Y_06035 PF00152 tRNA synthetases class II (D, K and N) O3Y_06035 PF01336 OB-fold nucleic acid binding domain O3Y_06040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_06040 PF00672 HAMP domain O3Y_06045 PF01242 6-pyruvoyl tetrahydropterin synthase O3Y_06050 PF03315 Serine dehydratase beta chain O3Y_06050 PF03313 Serine dehydratase alpha chain O3Y_06055 PF03222 Tryptophan/tyrosine permease family O3Y_06060 PF00293 NUDIX domain O3Y_06065 PF00425 chorismate binding enzyme O3Y_06065 PF04715 Anthranilate synthase component I, N terminal region O3Y_06080 PF04317 YcjX-like family, DUF463 O3Y_06085 PF05128 Domain of unknown function (DUF697) O3Y_06090 PF18024 Helix-turn-helix domain O3Y_06090 PF00158 Sigma-54 interaction domain O3Y_06095 PF13302 Acetyltransferase (GNAT) domain O3Y_06105 PF00892 EamA-like transporter family O3Y_06110 PF01168 Alanine racemase, N-terminal domain O3Y_06110 PF00842 Alanine racemase, C-terminal domain O3Y_06115 PF00672 HAMP domain O3Y_06115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_06120 PF00939 Sodium:sulfate symporter transmembrane region O3Y_06125 PF00512 His Kinase A (phospho-acceptor) domain O3Y_06125 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_06125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_06130 PF02954 Bacterial regulatory protein, Fis family O3Y_06130 PF00072 Response regulator receiver domain O3Y_06130 PF00158 Sigma-54 interaction domain O3Y_06135 PF04393 Protein of unknown function (DUF535) O3Y_06140 PF06629 MltA-interacting protein MipA O3Y_06145 PF00672 HAMP domain O3Y_06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_06145 PF00512 His Kinase A (phospho-acceptor) domain O3Y_06150 PF00072 Response regulator receiver domain O3Y_06150 PF00486 Transcriptional regulatory protein, C terminal O3Y_06170 PF13407 Periplasmic binding protein domain O3Y_06175 PF00005 ABC transporter O3Y_06180 PF02653 Branched-chain amino acid transport system / permease component O3Y_06195 PF01970 Tripartite tricarboxylate transporter TctA family O3Y_06210 PF00392 Bacterial regulatory proteins, gntR family O3Y_06210 PF07729 FCD domain O3Y_06220 PF00285 Citrate synthase, C-terminal domain O3Y_06225 PF00694 Aconitase C-terminal domain O3Y_06225 PF00330 Aconitase family (aconitate hydratase) O3Y_06230 PF04303 PrpF protein O3Y_06235 PF16177 Acetyl-coenzyme A synthetase N-terminus O3Y_06235 PF00501 AMP-binding enzyme O3Y_06235 PF13193 AMP-binding enzyme C-terminal domain O3Y_06250 PF07687 Peptidase dimerisation domain O3Y_06250 PF01546 Peptidase family M20/M25/M40 O3Y_06255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_06260 PF04209 homogentisate 1,2-dioxygenase O3Y_06270 PF14497 Glutathione S-transferase, C-terminal domain O3Y_06270 PF02798 Glutathione S-transferase, N-terminal domain O3Y_06275 PF00072 Response regulator receiver domain O3Y_06280 PF01627 Hpt domain O3Y_06280 PF00072 Response regulator receiver domain O3Y_06280 PF00672 HAMP domain O3Y_06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_06280 PF00512 His Kinase A (phospho-acceptor) domain O3Y_06280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) O3Y_06285 PF08534 Redoxin O3Y_06285 PF00462 Glutaredoxin O3Y_06290 PF00990 Diguanylate cyclase, GGDEF domain O3Y_06295 PF17785 PUA-like domain O3Y_06295 PF10672 S-adenosylmethionine-dependent methyltransferase O3Y_06300 PF00708 Acylphosphatase O3Y_06305 PF04358 DsrC like protein O3Y_06310 PF01027 Inhibitor of apoptosis-promoting Bax1 O3Y_06315 PF00005 ABC transporter O3Y_06320 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_06325 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_06330 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_06335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases O3Y_06335 PF14824 Sirohaem biosynthesis protein central O3Y_06335 PF10414 Sirohaem synthase dimerisation region O3Y_06345 PF04055 Radical SAM superfamily O3Y_06350 PF06508 Queuosine biosynthesis protein QueC O3Y_06370 PF00563 EAL domain O3Y_06370 PF00990 Diguanylate cyclase, GGDEF domain O3Y_06370 PF03707 Bacterial signalling protein N terminal repeat O3Y_06380 PF00990 Diguanylate cyclase, GGDEF domain O3Y_06380 PF17158 Membrane-associated sensor, integral membrane domain O3Y_06385 PF00012 Hsp70 protein O3Y_06390 PF00012 Hsp70 protein O3Y_06400 PF00563 EAL domain O3Y_06400 PF00990 Diguanylate cyclase, GGDEF domain O3Y_06400 PF03707 Bacterial signalling protein N terminal repeat O3Y_06420 PF00271 Helicase conserved C-terminal domain O3Y_06420 PF00270 DEAD/DEAH box helicase O3Y_06420 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold O3Y_06420 PF04408 Helicase associated domain (HA2) O3Y_06420 PF11898 Domain of unknown function (DUF3418) O3Y_06430 PF00012 Hsp70 protein O3Y_06435 PF10437 Bacterial lipoate protein ligase C-terminus O3Y_06435 PF03099 Biotin/lipoate A/B protein ligase family O3Y_06445 PF03466 LysR substrate binding domain O3Y_06445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_06450 PF07690 Major Facilitator Superfamily O3Y_06455 PF03441 FAD binding domain of DNA photolyase O3Y_06455 PF00875 DNA photolyase O3Y_06460 PF00893 Small Multidrug Resistance protein O3Y_06465 PF00672 HAMP domain O3Y_06465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_06480 PF07194 P2 response regulator binding domain O3Y_06480 PF01584 CheW-like domain O3Y_06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_06480 PF02895 Signal transducing histidine kinase, homodimeric domain O3Y_06480 PF01627 Hpt domain O3Y_06485 PF01627 Hpt domain O3Y_06485 PF01584 CheW-like domain O3Y_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_06485 PF00072 Response regulator receiver domain O3Y_06490 PF03705 CheR methyltransferase, all-alpha domain O3Y_06490 PF01739 CheR methyltransferase, SAM binding domain O3Y_06500 PF01339 CheB methylesterase O3Y_06500 PF00072 Response regulator receiver domain O3Y_06505 PF01584 CheW-like domain O3Y_06510 PF17202 Single cache domain 3 O3Y_06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_06510 PF00672 HAMP domain O3Y_06515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_06515 PF00672 HAMP domain O3Y_06515 PF12729 Four helix bundle sensory module for signal transduction O3Y_06520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_06520 PF13426 PAS domain O3Y_06520 PF08447 PAS fold O3Y_06525 PF00271 Helicase conserved C-terminal domain O3Y_06525 PF00270 DEAD/DEAH box helicase O3Y_06535 PF02321 Outer membrane efflux protein O3Y_06540 PF00529 HlyD membrane-fusion protein of T1SS O3Y_06540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion O3Y_06545 PF07690 Major Facilitator Superfamily O3Y_06550 PF00672 HAMP domain O3Y_06550 PF02743 Cache domain O3Y_06550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_06555 PF02074 Carboxypeptidase Taq (M32) metallopeptidase O3Y_06560 PF05638 Type VI secretion system effector, Hcp O3Y_06565 PF16671 Actin cross-linking domain O3Y_06565 PF04717 Type VI secretion system, phage-baseplate injector O3Y_06590 PF01810 LysE type translocator O3Y_06595 PF01235 Sodium:alanine symporter family O3Y_06610 PF13416 Bacterial extracellular solute-binding protein O3Y_06615 PF13416 Bacterial extracellular solute-binding protein O3Y_06620 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_06625 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_06630 PF00005 ABC transporter O3Y_06630 PF08402 TOBE domain O3Y_06650 PF01171 PP-loop family O3Y_06655 PF00582 Universal stress protein family O3Y_06660 PF13545 Crp-like helix-turn-helix domain O3Y_06660 PF00027 Cyclic nucleotide-binding domain O3Y_06675 PF00403 Heavy-metal-associated domain O3Y_06685 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP O3Y_06685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III O3Y_06700 PF00115 Cytochrome C and Quinol oxidase polypeptide I O3Y_06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_06715 PF00072 Response regulator receiver domain O3Y_06715 PF09308 LuxQ, periplasmic O3Y_06715 PF00512 His Kinase A (phospho-acceptor) domain O3Y_06720 PF00664 ABC transporter transmembrane region O3Y_06720 PF00005 ABC transporter O3Y_06720 PF03412 Peptidase C39 family O3Y_06730 PF00005 ABC transporter O3Y_06730 PF03412 Peptidase C39 family O3Y_06730 PF00664 ABC transporter transmembrane region O3Y_06740 PF02794 RTX toxin acyltransferase family O3Y_06745 PF07634 RtxA repeat O3Y_06745 PF11713 Peptidase C80 family O3Y_06745 PF11647 Membrane Localization Domain O3Y_06745 PF12146 Serine aminopeptidase, S33 O3Y_06745 PF16671 Actin cross-linking domain O3Y_06765 PF01381 Helix-turn-helix O3Y_06770 PF01376 Heat-labile enterotoxin beta chain O3Y_06775 PF01375 Heat-labile enterotoxin alpha chain O3Y_06780 PF05707 Zonular occludens toxin (Zot) O3Y_06785 PF10734 Protein of unknown function (DUF2523) O3Y_06790 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII O3Y_06815 PF01381 Helix-turn-helix O3Y_06880 PF01527 Transposase O3Y_06885 PF00665 Integrase core domain O3Y_06900 PF06303 MatP N-terminal domain O3Y_06900 PF17414 MatP C-terminal ribbon-helix-helix domain O3Y_06905 PF13654 AAA domain O3Y_06905 PF05362 Lon protease (S16) C-terminal proteolytic domain O3Y_06910 PF07977 FabA-like domain O3Y_06915 PF04957 Ribosome modulation factor O3Y_06935 PF02926 THUMP domain O3Y_06935 PF01170 Putative RNA methylase family UPF0020 O3Y_06935 PF10672 S-adenosylmethionine-dependent methyltransferase O3Y_06940 PF07126 Cell-division protein ZapC O3Y_06945 PF01180 Dihydroorotate dehydrogenase O3Y_06950 PF05088 Bacterial NAD-glutamate dehydrogenase O3Y_06960 PF11940 Domain of unknown function (DUF3458) Ig-like fold O3Y_06960 PF17432 Domain of unknown function (DUF3458_C) ARM repeats O3Y_06960 PF01433 Peptidase family M1 domain O3Y_06995 PF04055 Radical SAM superfamily O3Y_06995 PF13186 Iron-sulfur cluster-binding domain O3Y_07075 PF04860 Phage portal protein O3Y_07175 PF01712 Deoxynucleoside kinase O3Y_07250 PF13408 Recombinase zinc beta ribbon domain O3Y_07250 PF00239 Resolvase, N terminal domain O3Y_07250 PF07508 Recombinase O3Y_07255 PF11940 Domain of unknown function (DUF3458) Ig-like fold O3Y_07255 PF01433 Peptidase family M1 domain O3Y_07255 PF17432 Domain of unknown function (DUF3458_C) ARM repeats O3Y_07265 PF17804 Tail specific protease N-terminal domain O3Y_07265 PF03572 Peptidase family S41 O3Y_07265 PF00595 PDZ domain O3Y_07265 PF11818 C-terminal domain of tail specific protease (DUF3340) O3Y_07270 PF04352 ProQ/FINO family O3Y_07270 PF17516 ProQ C-terminal domain O3Y_07275 PF13185 GAF domain O3Y_07280 PF00005 ABC transporter O3Y_07280 PF00664 ABC transporter transmembrane region O3Y_07285 PF04403 Paraquat-inducible protein A O3Y_07290 PF02470 MlaD protein O3Y_07295 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF O3Y_07295 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF O3Y_07295 PF01189 16S rRNA methyltransferase RsmB/F O3Y_07300 PF13509 S1 domain O3Y_07300 PF17783 CvfB-like winged helix domain O3Y_07315 PF00793 DAHP synthetase I family O3Y_07320 PF04461 Protein of unknown function (DUF520) O3Y_07325 PF02146 Sir2 family O3Y_07340 PF13247 4Fe-4S dicluster domain O3Y_07345 PF01568 Molydopterin dinucleotide binding domain O3Y_07345 PF00384 Molybdopterin oxidoreductase O3Y_07345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain O3Y_07355 PF02613 Nitrate reductase delta subunit O3Y_07375 PF02634 FdhD/NarQ family O3Y_07380 PF12848 ABC transporter O3Y_07380 PF00005 ABC transporter O3Y_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_07385 PF00512 His Kinase A (phospho-acceptor) domain O3Y_07385 PF00989 PAS fold O3Y_07390 PF00072 Response regulator receiver domain O3Y_07390 PF00158 Sigma-54 interaction domain O3Y_07390 PF02954 Bacterial regulatory protein, Fis family O3Y_07395 PF12849 PBP superfamily domain O3Y_07400 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_07405 PF00005 ABC transporter O3Y_07405 PF08402 TOBE domain O3Y_07410 PF12804 MobA-like NTP transferase domain O3Y_07415 PF03453 MoeA N-terminal region (domain I and II) O3Y_07415 PF03454 MoeA C-terminal region (domain IV) O3Y_07415 PF00994 Probable molybdopterin binding domain O3Y_07440 PF00480 ROK family O3Y_07455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_07455 PF00672 HAMP domain O3Y_07455 PF02743 Cache domain O3Y_07460 PF00877 NlpC/P60 family O3Y_07480 PF01554 MatE O3Y_07490 PF14743 DNA ligase OB-like domain O3Y_07490 PF01068 ATP dependent DNA ligase domain O3Y_07500 PF03544 Gram-negative bacterial TonB protein C-terminal O3Y_07505 PF02472 Biopolymer transport protein ExbD/TolR O3Y_07510 PF01618 MotA/TolQ/ExbB proton channel family O3Y_07515 PF01618 MotA/TolQ/ExbB proton channel family O3Y_07525 PF13416 Bacterial extracellular solute-binding protein O3Y_07530 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_07535 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_07540 PF00005 ABC transporter O3Y_07540 PF17912 MalK OB fold domain O3Y_07545 PF00455 DeoR C terminal sensor domain O3Y_07545 PF08220 DeoR-like helix-turn-helix domain O3Y_07550 PF03009 Glycerophosphoryl diester phosphodiesterase family O3Y_07555 PF04074 YhcH/YjgK/YiaL O3Y_07560 PF01042 Endoribonuclease L-PSP O3Y_07565 PF00356 Bacterial regulatory proteins, lacI family O3Y_07570 PF00232 Glycosyl hydrolase family 1 O3Y_07575 PF00141 Peroxidase O3Y_07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_07580 PF03466 LysR substrate binding domain O3Y_07590 PF00529 HlyD membrane-fusion protein of T1SS O3Y_07600 PF00005 ABC transporter O3Y_07600 PF02687 FtsX-like permease family O3Y_07600 PF12704 MacB-like periplasmic core domain O3Y_07605 PF00005 ABC transporter O3Y_07605 PF12704 MacB-like periplasmic core domain O3Y_07605 PF02687 FtsX-like permease family O3Y_07610 PF00005 ABC transporter O3Y_07610 PF02687 FtsX-like permease family O3Y_07610 PF12704 MacB-like periplasmic core domain O3Y_07615 PF02322 Cytochrome bd terminal oxidase subunit II O3Y_07620 PF01654 Cytochrome bd terminal oxidase subunit I O3Y_07630 PF10415 Fumarase C C-terminus O3Y_07630 PF00206 Lyase O3Y_07660 PF00501 AMP-binding enzyme O3Y_07660 PF13193 AMP-binding enzyme C-terminal domain O3Y_07665 PF03466 LysR substrate binding domain O3Y_07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_07670 PF00361 Proton-conducting membrane transporter O3Y_07670 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus O3Y_07675 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) O3Y_07680 PF00080 Copper/zinc superoxide dismutase (SODC) O3Y_07690 PF00199 Catalase O3Y_07690 PF06628 Catalase-related immune-responsive O3Y_07700 PF03466 LysR substrate binding domain O3Y_07700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_07705 PF03306 Alpha-acetolactate decarboxylase O3Y_07710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain O3Y_07710 PF00205 Thiamine pyrophosphate enzyme, central domain O3Y_07710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain O3Y_07720 PF00563 EAL domain O3Y_07720 PF17154 Gammaproteobacterial periplasmic sensor domain O3Y_07720 PF00990 Diguanylate cyclase, GGDEF domain O3Y_07720 PF00672 HAMP domain O3Y_07725 PF00990 Diguanylate cyclase, GGDEF domain O3Y_07730 PF01263 Aldose 1-epimerase O3Y_07735 PF08544 GHMP kinases C terminal O3Y_07735 PF00288 GHMP kinases N terminal domain O3Y_07735 PF10509 Galactokinase galactose-binding signature O3Y_07740 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain O3Y_07740 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain O3Y_07745 PF07690 Major Facilitator Superfamily O3Y_07755 PF00990 Diguanylate cyclase, GGDEF domain O3Y_07755 PF00072 Response regulator receiver domain O3Y_07770 PF00072 Response regulator receiver domain O3Y_07770 PF01584 CheW-like domain O3Y_07780 PF12431 Transcriptional regulator O3Y_07780 PF00072 Response regulator receiver domain O3Y_07785 PF00989 PAS fold O3Y_07785 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain O3Y_07785 PF17203 Single cache domain 3 O3Y_07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_07800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion O3Y_07820 PF04204 Homoserine O-succinyltransferase O3Y_07835 PF05971 RNA methyltransferase O3Y_07840 PF01863 Protein of unknown function DUF45 O3Y_07850 PF03466 LysR substrate binding domain O3Y_07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_07875 PF02321 Outer membrane efflux protein O3Y_07880 PF05736 OprF membrane domain O3Y_07880 PF00691 OmpA family O3Y_07890 PF03435 Saccharopine dehydrogenase NADP binding domain O3Y_07890 PF16653 Saccharopine dehydrogenase C-terminal domain O3Y_07895 PF00202 Aminotransferase class-III O3Y_07900 PF06965 Na+/H+ antiporter 1 O3Y_07915 PF00005 ABC transporter O3Y_07920 PF01554 MatE O3Y_07925 PF11066 Protein of unknown function (DUF2867) O3Y_07925 PF13460 NAD(P)H-binding O3Y_07935 PF07690 Major Facilitator Superfamily O3Y_07940 PF01479 S4 domain O3Y_07940 PF00849 RNA pseudouridylate synthase O3Y_07945 PF04851 Type III restriction enzyme, res subunit O3Y_07945 PF00271 Helicase conserved C-terminal domain O3Y_07955 PF00486 Transcriptional regulatory protein, C terminal O3Y_07955 PF00072 Response regulator receiver domain O3Y_07965 PF01386 Ribosomal L25p family O3Y_07970 PF00990 Diguanylate cyclase, GGDEF domain O3Y_07970 PF01590 GAF domain O3Y_07970 PF00563 EAL domain O3Y_07970 PF00360 Phytochrome region O3Y_07985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_07985 PF00672 HAMP domain O3Y_07985 PF12729 Four helix bundle sensory module for signal transduction O3Y_08005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle O3Y_08005 PF12793 Sugar transport-related sRNA regulator N-term O3Y_08015 PF04151 Bacterial pre-peptidase C-terminal domain O3Y_08015 PF01752 Collagenase O3Y_08015 PF08453 Peptidase family M9 N-terminal O3Y_08025 PF03707 Bacterial signalling protein N terminal repeat O3Y_08025 PF00563 EAL domain O3Y_08025 PF00990 Diguanylate cyclase, GGDEF domain O3Y_08030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_08030 PF00512 His Kinase A (phospho-acceptor) domain O3Y_08030 PF09308 LuxQ, periplasmic O3Y_08030 PF00072 Response regulator receiver domain O3Y_08035 PF03448 MgtE intracellular N domain O3Y_08035 PF00571 CBS domain O3Y_08035 PF01769 Divalent cation transporter O3Y_08050 PF03222 Tryptophan/tyrosine permease family O3Y_08055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion O3Y_08060 PF00005 ABC transporter O3Y_08075 PF06945 Protein of unknown function (DUF1289) O3Y_08085 PF13416 Bacterial extracellular solute-binding protein O3Y_08090 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_08095 PF00005 ABC transporter O3Y_08100 PF01066 CDP-alcohol phosphatidyltransferase O3Y_08105 PF00849 RNA pseudouridylate synthase O3Y_08110 PF00209 Sodium:neurotransmitter symporter family O3Y_08115 PF13396 Phospholipase_D-nuclease N-terminal O3Y_08115 PF13091 PLD-like domain O3Y_08120 PF01053 Cys/Met metabolism PLP-dependent enzyme O3Y_08125 PF03352 Methyladenine glycosylase O3Y_08130 PF00873 AcrB/AcrD/AcrF family O3Y_08135 PF13533 Biotin-lipoyl like O3Y_08140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion O3Y_08140 PF00529 HlyD membrane-fusion protein of T1SS O3Y_08155 PF04012 PspA/IM30 family O3Y_08160 PF00158 Sigma-54 interaction domain O3Y_08160 PF02954 Bacterial regulatory protein, Fis family O3Y_08165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle O3Y_08170 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_08175 PF12911 N-terminal TM domain of oligopeptide transport permease C O3Y_08175 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_08180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_08180 PF00005 ABC transporter O3Y_08185 PF00005 ABC transporter O3Y_08200 PF02833 DHHA2 domain O3Y_08200 PF01368 DHH family O3Y_08220 PF01568 Molydopterin dinucleotide binding domain O3Y_08220 PF18364 Molybdopterin oxidoreductase N-terminal domain O3Y_08220 PF00384 Molybdopterin oxidoreductase O3Y_08225 PF03264 NapC/NirT cytochrome c family, N-terminal region O3Y_08230 PF06796 Periplasmic nitrate reductase protein NapE O3Y_08240 PF01226 Formate/nitrite transporter O3Y_08250 PF01370 NAD dependent epimerase/dehydratase family O3Y_08255 PF02698 DUF218 domain O3Y_08265 PF04279 Intracellular septation protein A O3Y_08270 PF03061 Thioesterase superfamily O3Y_08275 PF03795 YCII-related domain O3Y_08285 PF01717 Cobalamin-independent synthase, Catalytic domain O3Y_08285 PF08267 Cobalamin-independent synthase, N-terminal domain O3Y_08290 PF03466 LysR substrate binding domain O3Y_08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_08305 PF05193 Peptidase M16 inactive domain O3Y_08305 PF00675 Insulinase (Peptidase family M16) O3Y_08310 PF00563 EAL domain O3Y_08310 PF00990 Diguanylate cyclase, GGDEF domain O3Y_08310 PF03707 Bacterial signalling protein N terminal repeat O3Y_08315 PF11842 Domain of unknown function (DUF3362) O3Y_08315 PF04055 Radical SAM superfamily O3Y_08315 PF08497 Radical SAM N-terminal O3Y_08320 PF01810 LysE type translocator O3Y_08325 PF01037 Lrp/AsnC ligand binding domain O3Y_08330 PF04310 MukB N-terminal O3Y_08330 PF16330 MukB hinge domain O3Y_08335 PF04288 MukE-like family O3Y_08340 PF03882 MukF winged-helix domain O3Y_08340 PF17192 MukF middle domain O3Y_08340 PF17193 MukF C-terminal domain O3Y_08350 PF02698 DUF218 domain O3Y_08355 PF00486 Transcriptional regulatory protein, C terminal O3Y_08355 PF00072 Response regulator receiver domain O3Y_08360 PF02613 Nitrate reductase delta subunit O3Y_08365 PF00356 Bacterial regulatory proteins, lacI family O3Y_08370 PF04994 TfoX C-terminal domain O3Y_08370 PF04993 TfoX N-terminal domain O3Y_08390 PF00534 Glycosyl transferases group 1 O3Y_08390 PF08323 Starch synthase catalytic domain O3Y_08395 PF00483 Nucleotidyl transferase O3Y_08400 PF01131 DNA topoisomerase O3Y_08400 PF08272 Topoisomerase I zinc-ribbon-like O3Y_08400 PF01396 Topoisomerase DNA binding C4 zinc finger O3Y_08400 PF01751 Toprim domain O3Y_08405 PF10692 Protein of unknown function (DUF2498) O3Y_08410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) O3Y_08420 PF03588 Leucyl/phenylalanyl-tRNA protein transferase O3Y_08425 PF04376 Arginine-tRNA-protein transferase, N terminus O3Y_08425 PF04377 Arginine-tRNA-protein transferase, C terminus O3Y_08430 PF01176 Translation initiation factor 1A / IF-1 O3Y_08435 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase O3Y_08435 PF12241 Trans-2-enoyl-CoA reductase catalytic region O3Y_08435 PF07055 Enoyl reductase FAD binding domain O3Y_08440 PF09317 Domain of unknown function (DUF1974) O3Y_08440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain O3Y_08440 PF02770 Acyl-CoA dehydrogenase, middle domain O3Y_08440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain O3Y_08445 PF00440 Bacterial regulatory proteins, tetR family O3Y_08445 PF16295 Tetracyclin repressor-like, C-terminal domain O3Y_08455 PF07383 Protein of unknown function (DUF1496) O3Y_08460 PF00171 Aldehyde dehydrogenase family O3Y_08465 PF08362 YcdC-like protein, C-terminal region O3Y_08465 PF00440 Bacterial regulatory proteins, tetR family O3Y_08485 PF00924 Mechanosensitive ion channel O3Y_08485 PF05552 Conserved TM helix O3Y_08490 PF04403 Paraquat-inducible protein A O3Y_08495 PF02470 MlaD protein O3Y_08505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion O3Y_08510 PF00873 AcrB/AcrD/AcrF family O3Y_08515 PF13356 Arm DNA-binding domain O3Y_08515 PF00589 Phage integrase family O3Y_08520 PF13356 Arm DNA-binding domain O3Y_08520 PF00589 Phage integrase family O3Y_08525 PF00176 SNF2 family N-terminal domain O3Y_08525 PF12419 SNF2 Helicase protein O3Y_08525 PF00271 Helicase conserved C-terminal domain O3Y_08545 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) O3Y_08545 PF18766 SWI2/SNF2 ATPase O3Y_08545 PF11867 Domain of unknown function (DUF3387) O3Y_08565 PF02384 N-6 DNA Methylase O3Y_08585 PF07646 Kelch motif O3Y_08590 PF01344 Kelch motif O3Y_08595 PF01418 Helix-turn-helix domain, rpiR family O3Y_08595 PF01380 SIS domain O3Y_08600 PF00701 Dihydrodipicolinate synthetase family O3Y_08605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component O3Y_08610 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component O3Y_08615 PF03480 Bacterial extracellular solute-binding protein, family 7 O3Y_08620 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase O3Y_08625 PF00480 ROK family O3Y_08630 PF01979 Amidohydrolase family O3Y_08635 PF13088 BNR repeat-like domain O3Y_08635 PF09264 Vibrio cholerae sialidase, lectin insertion O3Y_08645 PF04002 RadC-like JAB domain O3Y_08660 PF00665 Integrase core domain O3Y_08665 PF01527 Transposase O3Y_08715 PF00005 ABC transporter O3Y_08800 PF03441 FAD binding domain of DNA photolyase O3Y_08800 PF00875 DNA photolyase O3Y_08810 PF09905 DNA-binding protein VF530 O3Y_08815 PF02954 Bacterial regulatory protein, Fis family O3Y_08815 PF00158 Sigma-54 interaction domain O3Y_08815 PF01590 GAF domain O3Y_08820 PF00171 Aldehyde dehydrogenase family O3Y_08840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit O3Y_08850 PF12833 Helix-turn-helix domain O3Y_08855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit O3Y_08855 PF02378 Phosphotransferase system, EIIC O3Y_08855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 O3Y_08860 PF01238 Phosphomannose isomerase type I O3Y_08865 PF06610 L-alanine exporter O3Y_08870 PF00072 Response regulator receiver domain O3Y_08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_08870 PF00512 His Kinase A (phospho-acceptor) domain O3Y_08870 PF09308 LuxQ, periplasmic O3Y_08880 PF02445 Quinolinate synthetase A protein O3Y_08890 PF00691 OmpA family O3Y_08895 PF07676 WD40-like Beta Propeller Repeat O3Y_08895 PF04052 TolB amino-terminal domain O3Y_08905 PF02472 Biopolymer transport protein ExbD/TolR O3Y_08910 PF01618 MotA/TolQ/ExbB proton channel family O3Y_08915 PF03061 Thioesterase superfamily O3Y_08920 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) O3Y_08925 PF08173 Membrane bound YbgT-like protein O3Y_08930 PF02322 Cytochrome bd terminal oxidase subunit II O3Y_08935 PF01654 Cytochrome bd terminal oxidase subunit I O3Y_08940 PF17864 RuvB AAA lid domain O3Y_08940 PF05491 RuvB C-terminal winged helix domain O3Y_08940 PF05496 Holliday junction DNA helicase RuvB P-loop domain O3Y_08945 PF01330 RuvA N terminal domain O3Y_08945 PF07499 RuvA, C-terminal domain O3Y_08950 PF02075 Crossover junction endodeoxyribonuclease RuvC O3Y_08955 PF09190 DALR domain O3Y_08955 PF01406 tRNA synthetases class I (C) catalytic domain O3Y_08960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD O3Y_08965 PF00149 Calcineurin-like phosphoesterase O3Y_08970 PF00563 EAL domain O3Y_08970 PF08668 HDOD domain O3Y_08975 PF02810 SEC-C motif O3Y_08980 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) O3Y_08985 PF13609 Gram-negative porin O3Y_08990 PF06733 DEAD_2 O3Y_08990 PF13307 Helicase C-terminal domain O3Y_08995 PF01925 Sulfite exporter TauE/SafE O3Y_09000 PF07445 Primosomal replication protein priC O3Y_09005 PF10689 Protein of unknown function (DUF2496) O3Y_09010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_09010 PF00672 HAMP domain O3Y_09015 PF03372 Endonuclease/Exonuclease/phosphatase family O3Y_09020 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_09025 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_09030 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_09035 PF00005 ABC transporter O3Y_09045 PF01228 Glycine radical O3Y_09045 PF02901 Pyruvate formate lyase-like O3Y_09055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_09055 PF00672 HAMP domain O3Y_09055 PF12729 Four helix bundle sensory module for signal transduction O3Y_09060 PF04055 Radical SAM superfamily O3Y_09070 PF03887 YfbU domain O3Y_09075 PF08298 PrkA AAA domain O3Y_09075 PF06798 PrkA serine protein kinase C-terminal domain O3Y_09080 PF04285 Protein of unknown function (DUF444) O3Y_09085 PF04293 SpoVR like protein O3Y_09090 PF02348 Cytidylyltransferase O3Y_09095 PF03966 Trm112p-like protein O3Y_09100 PF02606 Tetraacyldisaccharide-1-P 4'-kinase O3Y_09105 PF00005 ABC transporter O3Y_09105 PF00664 ABC transporter transmembrane region O3Y_09110 PF00753 Metallo-beta-lactamase superfamily O3Y_09110 PF03772 Competence protein O3Y_09110 PF13567 Domain of unknown function (DUF4131) O3Y_09120 PF02687 FtsX-like permease family O3Y_09120 PF12704 MacB-like periplasmic core domain O3Y_09125 PF00005 ABC transporter O3Y_09130 PF02687 FtsX-like permease family O3Y_09130 PF12704 MacB-like periplasmic core domain O3Y_09140 PF00270 DEAD/DEAH box helicase O3Y_09140 PF17757 UvrB interaction domain O3Y_09140 PF00271 Helicase conserved C-terminal domain O3Y_09140 PF03461 TRCF domain O3Y_09140 PF02559 CarD-like/TRCF domain O3Y_09150 PF12563 Hemolytic toxin N terminal O3Y_09150 PF16458 Beta-prism lectin O3Y_09150 PF07968 Leukocidin/Hemolysin toxin family O3Y_09160 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_09165 PF05728 Uncharacterised protein family (UPF0227) O3Y_09175 PF08139 Prokaryotic membrane lipoprotein lipid attachment site O3Y_09175 PF13036 Peptidoglycan-synthase activator LpoB O3Y_09190 PF01230 HIT domain O3Y_09195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_09195 PF00672 HAMP domain O3Y_09205 PF07840 FadR C-terminal domain O3Y_09205 PF00392 Bacterial regulatory proteins, gntR family O3Y_09210 PF06450 Bacterial Na+/H+ antiporter B (NhaB) O3Y_09215 PF02600 Disulfide bond formation protein DsbB O3Y_09220 PF09397 Ftsk gamma domain O3Y_09220 PF17854 FtsK alpha domain O3Y_09220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE O3Y_09220 PF01580 FtsK/SpoIIIE family O3Y_09225 PF01037 Lrp/AsnC ligand binding domain O3Y_09230 PF05222 Alanine dehydrogenase/PNT, N-terminal domain O3Y_09230 PF01262 Alanine dehydrogenase/PNT, C-terminal domain O3Y_09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_09240 PF03466 LysR substrate binding domain O3Y_09250 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) O3Y_09255 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family O3Y_09260 PF18073 Rubredoxin metal binding domain O3Y_09265 PF06305 Lipopolysaccharide assembly protein A domain O3Y_09270 PF00216 Bacterial DNA-binding protein O3Y_09275 PF00575 S1 RNA binding domain O3Y_09280 PF02224 Cytidylate kinase O3Y_09290 PF13145 PPIC-type PPIASE domain O3Y_09295 PF00216 Bacterial DNA-binding protein O3Y_09300 PF05362 Lon protease (S16) C-terminal proteolytic domain O3Y_09300 PF00004 ATPase family associated with various cellular activities (AAA) O3Y_09300 PF02190 ATP-dependent protease La (LON) substrate-binding domain O3Y_09305 PF07724 AAA domain (Cdc48 subfamily) O3Y_09305 PF06689 ClpX C4-type zinc finger O3Y_09305 PF10431 C-terminal, D2-small domain, of ClpB protein O3Y_09310 PF00574 Clp protease O3Y_09315 PF05698 Bacterial trigger factor protein (TF) C-terminus O3Y_09315 PF05697 Bacterial trigger factor protein (TF) O3Y_09315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase O3Y_09320 PF02743 Cache domain O3Y_09320 PF00512 His Kinase A (phospho-acceptor) domain O3Y_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_09325 PF02954 Bacterial regulatory protein, Fis family O3Y_09325 PF00072 Response regulator receiver domain O3Y_09325 PF00158 Sigma-54 interaction domain O3Y_09330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component O3Y_09335 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component O3Y_09340 PF03480 Bacterial extracellular solute-binding protein, family 7 O3Y_09345 PF02696 Uncharacterized ACR, YdiU/UPF0061 family O3Y_09360 PF13188 PAS domain O3Y_09360 PF00990 Diguanylate cyclase, GGDEF domain O3Y_09360 PF03707 Bacterial signalling protein N terminal repeat O3Y_09360 PF00563 EAL domain O3Y_09400 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain O3Y_09400 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain O3Y_09405 PF02668 Taurine catabolism dioxygenase TauD, TfdA family O3Y_09410 PF01494 FAD binding domain O3Y_09415 PF03466 LysR substrate binding domain O3Y_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_09425 PF00384 Molybdopterin oxidoreductase O3Y_09425 PF18364 Molybdopterin oxidoreductase N-terminal domain O3Y_09425 PF01568 Molydopterin dinucleotide binding domain O3Y_09430 PF03264 NapC/NirT cytochrome c family, N-terminal region O3Y_09435 PF00704 Glycosyl hydrolases family 18 O3Y_09440 PF01773 Na+ dependent nucleoside transporter N-terminus O3Y_09440 PF07662 Na+ dependent nucleoside transporter C-terminus O3Y_09440 PF07670 Nucleoside recognition O3Y_09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_09445 PF03466 LysR substrate binding domain O3Y_09450 PF13406 Transglycosylase SLT domain O3Y_09455 PF05166 YcgL domain O3Y_09460 PF03775 Septum formation inhibitor MinC, C-terminal domain O3Y_09460 PF05209 Septum formation inhibitor MinC, N-terminal domain O3Y_09465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain O3Y_09470 PF03776 Septum formation topological specificity factor MinE O3Y_09475 PF04170 NlpE N-terminal domain O3Y_09495 PF07690 Major Facilitator Superfamily O3Y_09505 PF12729 Four helix bundle sensory module for signal transduction O3Y_09505 PF00672 HAMP domain O3Y_09505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_09510 PF01381 Helix-turn-helix O3Y_09510 PF07883 Cupin domain O3Y_09515 PF03594 Benzoate membrane transport protein O3Y_09520 PF00501 AMP-binding enzyme O3Y_09520 PF13193 AMP-binding enzyme C-terminal domain O3Y_09525 PF13378 Enolase C-terminal domain-like O3Y_09530 PF00378 Enoyl-CoA hydratase/isomerase O3Y_09535 PF12697 Alpha/beta hydrolase family O3Y_09540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain O3Y_09540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain O3Y_09540 PF16582 Middle domain of thiamine pyrophosphate O3Y_09545 PF00425 chorismate binding enzyme O3Y_09550 PF00155 Aminotransferase class I and II O3Y_09560 PF01966 HD domain O3Y_09560 PF13286 Phosphohydrolase-associated domain O3Y_09580 PF01612 3'-5' exonuclease O3Y_09580 PF00570 HRDC domain O3Y_09585 PF00501 AMP-binding enzyme O3Y_09585 PF13193 AMP-binding enzyme C-terminal domain O3Y_09590 PF00561 alpha/beta hydrolase fold O3Y_09605 PF00814 Glycoprotease family O3Y_09610 PF04851 Type III restriction enzyme, res subunit O3Y_09610 PF13307 Helicase C-terminal domain O3Y_09620 PF00551 Formyl transferase O3Y_09620 PF01842 ACT domain O3Y_09625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family O3Y_09625 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_09630 PF01343 Peptidase family S49 O3Y_09635 PF00710 Asparaginase, N-terminal O3Y_09635 PF17763 Glutaminase/Asparaginase C-terminal domain O3Y_09640 PF07023 Protein of unknown function (DUF1315) O3Y_09650 PF01641 SelR domain O3Y_09655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain O3Y_09655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain O3Y_09660 PF01263 Aldose 1-epimerase O3Y_09670 PF13847 Methyltransferase domain O3Y_09685 PF01584 CheW-like domain O3Y_09685 PF00072 Response regulator receiver domain O3Y_09690 PF00480 ROK family O3Y_09695 PF00224 Pyruvate kinase, barrel domain O3Y_09695 PF02887 Pyruvate kinase, alpha/beta domain O3Y_09700 PF01734 Patatin-like phospholipase O3Y_09715 PF00209 Sodium:neurotransmitter symporter family O3Y_09725 PF00367 phosphotransferase system, EIIB O3Y_09725 PF02378 Phosphotransferase system, EIIC O3Y_09730 PF01026 TatD related DNase O3Y_09735 PF09115 DNA polymerase III, delta subunit, C terminal O3Y_09740 PF02223 Thymidylate kinase O3Y_09745 PF02618 YceG-like family O3Y_09750 PF01063 Amino-transferase class IV O3Y_09755 PF02801 Beta-ketoacyl synthase, C-terminal domain O3Y_09755 PF00109 Beta-ketoacyl synthase, N-terminal domain O3Y_09760 PF00550 Phosphopantetheine attachment site O3Y_09770 PF00698 Acyl transferase domain O3Y_09775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal O3Y_09775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III O3Y_09780 PF02504 Fatty acid synthesis protein O3Y_09785 PF01783 Ribosomal L32p protein family O3Y_09790 PF02620 Large ribosomal RNA subunit accumulation protein YceD O3Y_09795 PF02545 Maf-like protein O3Y_09800 PF01479 S4 domain O3Y_09800 PF00849 RNA pseudouridylate synthase O3Y_09810 PF12111 Polyribonucleotide phosphorylase C terminal O3Y_09810 PF10150 Ribonuclease E/G family O3Y_09810 PF00575 S1 RNA binding domain O3Y_09815 PF00916 Sulfate permease family O3Y_09815 PF01740 STAS domain O3Y_09825 PF00465 Iron-containing alcohol dehydrogenase O3Y_09825 PF00171 Aldehyde dehydrogenase family O3Y_09830 PF01914 MarC family integral membrane protein O3Y_09835 PF02774 Semialdehyde dehydrogenase, dimerisation domain O3Y_09835 PF01118 Semialdehyde dehydrogenase, NAD binding domain O3Y_09840 PF03553 Na+/H+ antiporter family O3Y_09850 PF04245 37-kD nucleoid-associated bacterial protein O3Y_09855 PF07208 Protein of unknown function (DUF1414) O3Y_09860 PF11893 Domain of unknown function (DUF3413) O3Y_09860 PF00884 Sulfatase O3Y_09865 PF00850 Histone deacetylase domain O3Y_09870 PF01131 DNA topoisomerase O3Y_09870 PF01751 Toprim domain O3Y_09875 PF00462 Glutaredoxin O3Y_09880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain O3Y_09880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain O3Y_09895 PF04333 MlaA lipoprotein O3Y_09905 PF03918 Cytochrome C biogenesis protein O3Y_09910 PF08534 Redoxin O3Y_09915 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal O3Y_09915 PF01578 Cytochrome C assembly protein O3Y_09920 PF03100 CcmE O3Y_09925 PF04995 Heme exporter protein D (CcmD) O3Y_09930 PF01578 Cytochrome C assembly protein O3Y_09935 PF03379 CcmB protein O3Y_09940 PF00005 ABC transporter O3Y_09950 PF01584 CheW-like domain O3Y_09960 PF13614 AAA domain O3Y_09965 PF00072 Response regulator receiver domain O3Y_09965 PF01339 CheB methylesterase O3Y_09970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_09970 PF01627 Hpt domain O3Y_09970 PF01584 CheW-like domain O3Y_09970 PF07194 P2 response regulator binding domain O3Y_09970 PF02895 Signal transducing histidine kinase, homodimeric domain O3Y_09975 PF04344 Chemotaxis phosphatase, CheZ O3Y_09980 PF00072 Response regulator receiver domain O3Y_09985 PF04542 Sigma-70 region 2 O3Y_09985 PF04545 Sigma-70, region 4 O3Y_09985 PF04539 Sigma-70 region 3 O3Y_09990 PF10609 NUBPL iron-transfer P-loop NTPase O3Y_09995 PF00448 SRP54-type protein, GTPase domain O3Y_10000 PF00771 FHIPEP family O3Y_10005 PF00300 Histidine phosphatase superfamily (branch 1) O3Y_10010 PF00675 Insulinase (Peptidase family M16) O3Y_10010 PF05193 Peptidase M16 inactive domain O3Y_10020 PF00750 tRNA synthetases class I (R) O3Y_10020 PF03485 Arginyl tRNA synthetase N terminal domain O3Y_10020 PF05746 DALR anticodon binding domain O3Y_10035 PF02421 Ferrous iron transport protein B O3Y_10035 PF07670 Nucleoside recognition O3Y_10035 PF07664 Ferrous iron transport protein B C terminus O3Y_10040 PF04023 FeoA domain O3Y_10045 PF02311 AraC-like ligand binding domain O3Y_10045 PF12833 Helix-turn-helix domain O3Y_10050 PF01297 Zinc-uptake complex component A periplasmic O3Y_10055 PF00005 ABC transporter O3Y_10060 PF00950 ABC 3 transport family O3Y_10065 PF02629 CoA binding domain O3Y_10065 PF00549 CoA-ligase O3Y_10070 PF08442 ATP-grasp domain O3Y_10070 PF00549 CoA-ligase O3Y_10075 PF02817 e3 binding domain O3Y_10075 PF00364 Biotin-requiring enzyme O3Y_10075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) O3Y_10080 PF02779 Transketolase, pyrimidine binding domain O3Y_10080 PF16078 2-oxoglutarate dehydrogenase N-terminus O3Y_10080 PF00676 Dehydrogenase E1 component O3Y_10080 PF16870 2-oxoglutarate dehydrogenase C-terminal O3Y_10085 PF13085 2Fe-2S iron-sulfur cluster binding domain O3Y_10090 PF00890 FAD binding domain O3Y_10090 PF02910 Fumarate reductase flavoprotein C-term O3Y_10095 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit O3Y_10100 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit O3Y_10105 PF00285 Citrate synthase, C-terminal domain O3Y_10110 PF01784 NIF3 (NGG1p interacting factor 3) O3Y_10120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III O3Y_10120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II O3Y_10120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain O3Y_10120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I O3Y_10125 PF03925 SeqA protein C-terminal domain O3Y_10125 PF17206 SeqA protein N-terminal domain O3Y_10130 PF12697 Alpha/beta hydrolase family O3Y_10140 PF00258 Flavodoxin O3Y_10145 PF04172 LrgB-like family O3Y_10150 PF03788 LrgA family O3Y_10155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_10155 PF03466 LysR substrate binding domain O3Y_10165 PF01475 Ferric uptake regulator family O3Y_10170 PF02774 Semialdehyde dehydrogenase, dimerisation domain O3Y_10170 PF01118 Semialdehyde dehydrogenase, NAD binding domain O3Y_10175 PF11890 Domain of unknown function (DUF3410) O3Y_10175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain O3Y_10175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain O3Y_10180 PF02801 Beta-ketoacyl synthase, C-terminal domain O3Y_10180 PF00109 Beta-ketoacyl synthase, N-terminal domain O3Y_10185 PF01266 FAD dependent oxidoreductase O3Y_10185 PF05430 S-adenosyl-L-methionine-dependent methyltransferase O3Y_10190 PF03358 NADPH-dependent FMN reductase O3Y_10195 PF08891 YfcL protein O3Y_10200 PF04315 Elongation factor P hydroxylase O3Y_10205 PF03458 UPF0126 domain O3Y_10210 PF01264 Chorismate synthase O3Y_10215 PF05175 Methyltransferase small domain O3Y_10220 PF01713 Smr domain O3Y_10225 PF01312 FlhB HrpN YscU SpaS Family O3Y_10230 PF01311 Bacterial export proteins, family 1 O3Y_10235 PF01313 Bacterial export proteins, family 3 O3Y_10240 PF00813 FliP family O3Y_10245 PF04347 Flagellar biosynthesis protein, FliO O3Y_10250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term O3Y_10255 PF02154 Flagellar motor switch protein FliM O3Y_10255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term O3Y_10260 PF03748 Flagellar basal body-associated protein FliL O3Y_10275 PF18269 T3SS EscN ATPase C-terminal domain O3Y_10275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain O3Y_10280 PF02108 Flagellar assembly protein FliH O3Y_10285 PF14841 FliG middle domain O3Y_10285 PF01706 FliG C-terminal domain O3Y_10285 PF14842 FliG N-terminal domain O3Y_10290 PF08345 Flagellar M-ring protein C-terminal O3Y_10290 PF01514 Secretory protein of YscJ/FliF family O3Y_10295 PF02049 Flagellar hook-basal body complex protein FliE O3Y_10300 PF02954 Bacterial regulatory protein, Fis family O3Y_10300 PF00072 Response regulator receiver domain O3Y_10300 PF00158 Sigma-54 interaction domain O3Y_10305 PF08447 PAS fold O3Y_10305 PF00989 PAS fold O3Y_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_10305 PF00512 His Kinase A (phospho-acceptor) domain O3Y_10305 PF13493 Domain of unknown function (DUF4118) O3Y_10305 PF13426 PAS domain O3Y_10310 PF00072 Response regulator receiver domain O3Y_10310 PF02954 Bacterial regulatory protein, Fis family O3Y_10310 PF00158 Sigma-54 interaction domain O3Y_10315 PF02561 Flagellar protein FliS O3Y_10325 PF07196 Flagellin hook IN motif O3Y_10325 PF07195 Flagellar hook-associated protein 2 C-terminus O3Y_10325 PF02465 Flagellar hook-associated protein 2 N-terminus O3Y_10330 PF03646 FlaG protein O3Y_10335 PF07196 Flagellin hook IN motif O3Y_10335 PF00700 Bacterial flagellin C-terminal helical region O3Y_10335 PF00669 Bacterial flagellin N-terminal helical region O3Y_10340 PF07196 Flagellin hook IN motif O3Y_10340 PF00700 Bacterial flagellin C-terminal helical region O3Y_10340 PF00669 Bacterial flagellin N-terminal helical region O3Y_10345 PF00700 Bacterial flagellin C-terminal helical region O3Y_10345 PF07196 Flagellin hook IN motif O3Y_10345 PF00669 Bacterial flagellin N-terminal helical region O3Y_10350 PF04261 Dyp-type peroxidase family O3Y_10355 PF11143 Protein of unknown function (DUF2919) O3Y_10370 PF03960 ArsC family O3Y_10375 PF01546 Peptidase family M20/M25/M40 O3Y_10375 PF07687 Peptidase dimerisation domain O3Y_10380 PF02557 D-alanyl-D-alanine carboxypeptidase O3Y_10390 PF06804 NlpB/DapX lipoprotein O3Y_10395 PF00701 Dihydrodipicolinate synthetase family O3Y_10405 PF00578 AhpC/TSA family O3Y_10410 PF00672 HAMP domain O3Y_10410 PF02743 Cache domain O3Y_10410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_10415 PF01594 AI-2E family transporter O3Y_10425 PF13181 Tetratricopeptide repeat O3Y_10425 PF01435 Peptidase family M48 O3Y_10430 PF03960 ArsC family O3Y_10435 PF03358 NADPH-dependent FMN reductase O3Y_10450 PF00860 Permease family O3Y_10455 PF04073 Aminoacyl-tRNA editing domain O3Y_10460 PF02872 5'-nucleotidase, C-terminal domain O3Y_10460 PF00149 Calcineurin-like phosphoesterase O3Y_10465 PF00793 DAHP synthetase I family O3Y_10470 PF13369 Transglutaminase-like superfamily O3Y_10475 PF04247 Invasion gene expression up-regulator, SirB O3Y_10480 PF13847 Methyltransferase domain O3Y_10480 PF17827 PrmC N-terminal domain O3Y_10485 PF03462 PCRF domain O3Y_10485 PF00472 RF-1 domain O3Y_10490 PF01488 Shikimate / quinate 5-dehydrogenase O3Y_10490 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain O3Y_10490 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain O3Y_10495 PF03550 Outer membrane lipoprotein LolB O3Y_10500 PF08544 GHMP kinases C terminal O3Y_10500 PF00288 GHMP kinases N terminal domain O3Y_10505 PF14572 Phosphoribosyl synthetase-associated domain O3Y_10505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase O3Y_10510 PF01195 Peptidyl-tRNA hydrolase O3Y_10515 PF01926 50S ribosome-binding GTPase O3Y_10515 PF06071 Protein of unknown function (DUF933) O3Y_10530 PF00669 Bacterial flagellin N-terminal helical region O3Y_10530 PF00700 Bacterial flagellin C-terminal helical region O3Y_10530 PF07196 Flagellin hook IN motif O3Y_10535 PF00669 Bacterial flagellin N-terminal helical region O3Y_10535 PF00700 Bacterial flagellin C-terminal helical region O3Y_10535 PF07196 Flagellin hook IN motif O3Y_10545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal O3Y_10545 PF07196 Flagellin hook IN motif O3Y_10550 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase O3Y_10550 PF10135 Rod binding protein O3Y_10555 PF02119 Flagellar P-ring protein O3Y_10560 PF02107 Flagellar L-ring protein O3Y_10565 PF00460 Flagella basal body rod protein O3Y_10565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal O3Y_10570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal O3Y_10570 PF00460 Flagella basal body rod protein O3Y_10575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal O3Y_10575 PF00460 Flagella basal body rod protein O3Y_10575 PF07559 Flagellar basal body protein FlaE O3Y_10580 PF13860 FlgD Ig-like domain O3Y_10580 PF03963 Flagellar hook capping protein - N-terminal region O3Y_10580 PF13861 FlgD Tudor-like domain O3Y_10585 PF00460 Flagella basal body rod protein O3Y_10585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal O3Y_10590 PF00460 Flagella basal body rod protein O3Y_10595 PF01739 CheR methyltransferase, SAM binding domain O3Y_10595 PF03705 CheR methyltransferase, all-alpha domain O3Y_10600 PF01584 CheW-like domain O3Y_10600 PF00072 Response regulator receiver domain O3Y_10635 PF08242 Methyltransferase domain O3Y_10635 PF00501 AMP-binding enzyme O3Y_10635 PF00668 Condensation domain O3Y_10635 PF00550 Phosphopantetheine attachment site O3Y_10640 PF08021 Siderophore-interacting FAD-binding domain O3Y_10640 PF04954 Siderophore-interacting protein O3Y_10645 PF07715 TonB-dependent Receptor Plug Domain O3Y_10655 PF01389 OmpA-like transmembrane domain O3Y_10655 PF00691 OmpA family O3Y_10660 PF00749 tRNA synthetases class I (E and Q), catalytic domain O3Y_10665 PF00403 Heavy-metal-associated domain O3Y_10675 PF00728 Glycosyl hydrolase family 20, catalytic domain O3Y_10675 PF02838 Glycosyl hydrolase family 20, domain 2 O3Y_10675 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain O3Y_10675 PF03173 Putative carbohydrate binding domain O3Y_10680 PF01963 TraB family O3Y_10690 PF01713 Smr domain O3Y_10695 PF00849 RNA pseudouridylate synthase O3Y_10695 PF01479 S4 domain O3Y_10700 PF08448 PAS fold O3Y_10700 PF00990 Diguanylate cyclase, GGDEF domain O3Y_10710 PF02769 AIR synthase related protein, C-terminal domain O3Y_10710 PF00586 AIR synthase related protein, N-terminal domain O3Y_10715 PF00551 Formyl transferase O3Y_10720 PF13230 Glutamine amidotransferases class-II O3Y_10725 PF13580 SIS domain O3Y_10745 PF00929 Exonuclease O3Y_10750 PF00075 RNase H O3Y_10755 PF08241 Methyltransferase domain O3Y_10760 PF16123 Hydroxyacylglutathione hydrolase C-terminus O3Y_10760 PF00753 Metallo-beta-lactamase superfamily O3Y_10765 PF01476 LysM domain O3Y_10765 PF01464 Transglycosylase SLT domain O3Y_10770 PF03372 Endonuclease/Exonuclease/phosphatase family O3Y_10775 PF00543 Nitrogen regulatory protein P-II O3Y_10780 PF05870 Phenolic acid decarboxylase (PAD) O3Y_10785 PF00034 Cytochrome c O3Y_10790 PF01171 PP-loop family O3Y_10790 PF09179 TilS substrate binding domain O3Y_10790 PF11734 TilS substrate C-terminal domain O3Y_10795 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit O3Y_10800 PF01336 OB-fold nucleic acid binding domain O3Y_10800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain O3Y_10800 PF02811 PHP domain O3Y_10800 PF07733 Bacterial DNA polymerase III alpha NTPase domain O3Y_10800 PF14579 Helix-hairpin-helix motif O3Y_10805 PF01351 Ribonuclease HII O3Y_10810 PF02684 Lipid-A-disaccharide synthetase O3Y_10815 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 O3Y_10815 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_10820 PF07977 FabA-like domain O3Y_10825 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_10825 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD O3Y_10830 PF03938 Outer membrane protein (OmpH-like) O3Y_10835 PF01103 Surface antigen O3Y_10835 PF07244 Surface antigen variable number repeat O3Y_10840 PF02163 Peptidase family M50 O3Y_10840 PF17820 PDZ domain O3Y_10845 PF13288 DXP reductoisomerase C-terminal domain O3Y_10845 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase O3Y_10845 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain O3Y_10855 PF01255 Putative undecaprenyl diphosphate synthase O3Y_10860 PF01765 Ribosome recycling factor O3Y_10865 PF00696 Amino acid kinase family O3Y_10870 PF00889 Elongation factor TS O3Y_10875 PF00318 Ribosomal protein S2 O3Y_10880 PF00557 Metallopeptidase family M24 O3Y_10885 PF08335 GlnD PII-uridylyltransferase O3Y_10885 PF01909 Nucleotidyltransferase domain O3Y_10885 PF01966 HD domain O3Y_10890 PF11944 Protein of unknown function (DUF3461) O3Y_10895 PF04608 Phosphatidylglycerophosphatase A O3Y_10900 PF00586 AIR synthase related protein, N-terminal domain O3Y_10900 PF02769 AIR synthase related protein, C-terminal domain O3Y_10905 PF01029 NusB family O3Y_10910 PF00885 6,7-dimethyl-8-ribityllumazine synthase O3Y_10915 PF00925 GTP cyclohydrolase II O3Y_10915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase O3Y_10920 PF00677 Lumazine binding domain O3Y_10925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region O3Y_10925 PF01872 RibD C-terminal domain O3Y_10930 PF03477 ATP cone domain O3Y_10935 PF00171 Aldehyde dehydrogenase family O3Y_10940 PF00696 Amino acid kinase family O3Y_10940 PF01472 PUA domain O3Y_10945 PF07417 Sigma factor-binding transcriptional regulator Crl O3Y_10955 PF00156 Phosphoribosyl transferase domain O3Y_10960 PF00860 Permease family O3Y_10965 PF01546 Peptidase family M20/M25/M40 O3Y_10965 PF07687 Peptidase dimerisation domain O3Y_10970 PF08443 RimK-like ATP-grasp domain O3Y_10970 PF18030 RimK PreATP-grasp domain O3Y_10975 PF18030 RimK PreATP-grasp domain O3Y_10975 PF08443 RimK-like ATP-grasp domain O3Y_10985 PF00209 Sodium:neurotransmitter symporter family O3Y_10990 PF17158 Membrane-associated sensor, integral membrane domain O3Y_10990 PF00990 Diguanylate cyclase, GGDEF domain O3Y_11000 PF00817 impB/mucB/samB family O3Y_11000 PF11798 IMS family HHH motif O3Y_11010 PF02424 ApbE family O3Y_11015 PF00970 Oxidoreductase FAD-binding domain O3Y_11015 PF00111 2Fe-2S iron-sulfur cluster binding domain O3Y_11015 PF00175 Oxidoreductase NAD-binding domain O3Y_11020 PF02508 Rnf-Nqr subunit, membrane protein O3Y_11025 PF02508 Rnf-Nqr subunit, membrane protein O3Y_11030 PF04205 FMN-binding domain O3Y_11035 PF03116 NQR2, RnfD, RnfE family O3Y_11040 PF11973 NQRA C-terminal domain O3Y_11040 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) O3Y_11045 PF01722 BolA-like protein O3Y_11050 PF05175 Methyltransferase small domain O3Y_11060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD O3Y_11065 PF07690 Major Facilitator Superfamily O3Y_11075 PF04545 Sigma-70, region 4 O3Y_11075 PF04542 Sigma-70 region 2 O3Y_11085 PF03502 Nucleoside-specific channel-forming protein, Tsx O3Y_11090 PF02558 Ketopantoate reductase PanE/ApbA O3Y_11090 PF08546 Ketopantoate reductase PanE/ApbA C terminal O3Y_11095 PF01965 DJ-1/PfpI family O3Y_11100 PF00266 Aminotransferase class-V O3Y_11105 PF02657 Fe-S metabolism associated domain O3Y_11110 PF00899 ThiF family O3Y_11115 PF03562 MltA specific insert domain O3Y_11115 PF06725 3D domain O3Y_11125 PF00696 Amino acid kinase family O3Y_11125 PF00583 Acetyltransferase (GNAT) family O3Y_11135 PF13538 UvrD-like helicase C-terminal domain O3Y_11140 PF12705 PD-(D/E)XK nuclease superfamily O3Y_11140 PF00580 UvrD/REP helicase N-terminal domain O3Y_11140 PF13361 UvrD-like helicase C-terminal domain O3Y_11145 PF17946 RecC C-terminal domain O3Y_11160 PF07130 YebG protein O3Y_11165 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle O3Y_11165 PF14602 Hexapeptide repeat of succinyl-transferase O3Y_11175 PF00583 Acetyltransferase (GNAT) family O3Y_11180 PF18030 RimK PreATP-grasp domain O3Y_11180 PF08443 RimK-like ATP-grasp domain O3Y_11180 PF02080 TrkA-C domain O3Y_11185 PF01544 CorA-like Mg2+ transporter protein O3Y_11195 PF01588 Putative tRNA binding domain O3Y_11200 PF00356 Bacterial regulatory proteins, lacI family O3Y_11205 PF16353 Domain of unknown function(DUF4981) O3Y_11205 PF00703 Glycosyl hydrolases family 2 O3Y_11205 PF02929 Beta galactosidase small chain O3Y_11205 PF02836 Glycosyl hydrolases family 2, TIM barrel domain O3Y_11205 PF02837 Glycosyl hydrolases family 2, sugar binding domain O3Y_11215 PF00072 Response regulator receiver domain O3Y_11220 PF00501 AMP-binding enzyme O3Y_11225 PF00679 Elongation factor G C-terminus O3Y_11225 PF00009 Elongation factor Tu GTP binding domain O3Y_11225 PF03764 Elongation factor G, domain IV O3Y_11225 PF03144 Elongation factor Tu domain 2 O3Y_11225 PF14492 Elongation Factor G, domain II O3Y_11230 PF18073 Rubredoxin metal binding domain O3Y_11240 PF18429 Domain of unknown function (DUF5609) O3Y_11250 PF01048 Phosphorylase superfamily O3Y_11255 PF01676 Metalloenzyme superfamily O3Y_11260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain O3Y_11260 PF00591 Glycosyl transferase family, a/b domain O3Y_11260 PF02885 Glycosyl transferase family, helical bundle domain O3Y_11265 PF01791 DeoC/LacD family aldolase O3Y_11270 PF07670 Nucleoside recognition O3Y_11270 PF07662 Na+ dependent nucleoside transporter C-terminus O3Y_11270 PF01773 Na+ dependent nucleoside transporter N-terminus O3Y_11275 PF01026 TatD related DNase O3Y_11280 PF03883 Peroxide stress protein YaaA O3Y_11285 PF01235 Sodium:alanine symporter family O3Y_11300 PF03167 Uracil DNA glycosylase superfamily O3Y_11305 PF01261 Xylose isomerase-like TIM barrel O3Y_11310 PF01228 Glycine radical O3Y_11315 PF14821 Threonine synthase N terminus O3Y_11315 PF00291 Pyridoxal-phosphate dependent enzyme O3Y_11320 PF08544 GHMP kinases C terminal O3Y_11320 PF00288 GHMP kinases N terminal domain O3Y_11325 PF00696 Amino acid kinase family O3Y_11325 PF01842 ACT domain O3Y_11325 PF03447 Homoserine dehydrogenase, NAD binding domain O3Y_11325 PF00742 Homoserine dehydrogenase O3Y_11325 PF13840 ACT domain O3Y_11335 PF03737 Aldolase/RraA O3Y_11345 PF00072 Response regulator receiver domain O3Y_11345 PF00486 Transcriptional regulatory protein, C terminal O3Y_11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_11350 PF00989 PAS fold O3Y_11350 PF00512 His Kinase A (phospho-acceptor) domain O3Y_11350 PF00072 Response regulator receiver domain O3Y_11350 PF01627 Hpt domain O3Y_11350 PF18415 Histidine kinase receptor ArcB trans-membrane domain O3Y_11355 PF00990 Diguanylate cyclase, GGDEF domain O3Y_11355 PF01590 GAF domain O3Y_11355 PF00563 EAL domain O3Y_11355 PF00360 Phytochrome region O3Y_11360 PF04055 Radical SAM superfamily O3Y_11360 PF16199 Radical_SAM C-terminal domain O3Y_11365 PF00310 Glutamine amidotransferases class-II O3Y_11365 PF04898 Glutamate synthase central domain O3Y_11365 PF01645 Conserved region in glutamate synthase O3Y_11365 PF01493 GXGXG motif O3Y_11370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster O3Y_11370 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_11375 PF01493 GXGXG motif O3Y_11375 PF00310 Glutamine amidotransferases class-II O3Y_11375 PF01645 Conserved region in glutamate synthase O3Y_11375 PF04898 Glutamate synthase central domain O3Y_11380 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_11380 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster O3Y_11390 PF01048 Phosphorylase superfamily O3Y_11400 PF01497 Periplasmic binding protein O3Y_11405 PF03458 UPF0126 domain O3Y_11410 PF03466 LysR substrate binding domain O3Y_11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_11415 PF01925 Sulfite exporter TauE/SafE O3Y_11420 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) O3Y_11425 PF00005 ABC transporter O3Y_11445 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain O3Y_11445 PF02142 MGS-like domain O3Y_11445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain O3Y_11450 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain O3Y_11450 PF00117 Glutamine amidotransferase class-I O3Y_11460 PF01113 Dihydrodipicolinate reductase, N-terminus O3Y_11460 PF05173 Dihydrodipicolinate reductase, C-terminus O3Y_11465 PF00293 NUDIX domain O3Y_11470 PF07517 SecA DEAD-like domain O3Y_11470 PF07516 SecA Wing and Scaffold domain O3Y_11470 PF02810 SEC-C motif O3Y_11470 PF01043 SecA preprotein cross-linking domain O3Y_11480 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase O3Y_11485 PF00091 Tubulin/FtsZ family, GTPase domain O3Y_11485 PF12327 FtsZ family, C-terminal domain O3Y_11490 PF02491 SHS2 domain inserted in FTSA O3Y_11495 PF03799 Cell division protein FtsQ O3Y_11495 PF08478 POTRA domain, FtsQ-type O3Y_11500 PF02875 Mur ligase family, glutamate ligase domain O3Y_11500 PF01225 Mur ligase family, catalytic domain O3Y_11500 PF08245 Mur ligase middle domain O3Y_11505 PF04101 Glycosyltransferase family 28 C-terminal domain O3Y_11505 PF03033 Glycosyltransferase family 28 N-terminal domain O3Y_11510 PF01098 Cell cycle protein O3Y_11515 PF08245 Mur ligase middle domain O3Y_11515 PF02875 Mur ligase family, glutamate ligase domain O3Y_11520 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 O3Y_11520 PF00953 Glycosyl transferase family 4 O3Y_11525 PF01225 Mur ligase family, catalytic domain O3Y_11525 PF02875 Mur ligase family, glutamate ligase domain O3Y_11525 PF08245 Mur ligase middle domain O3Y_11530 PF01225 Mur ligase family, catalytic domain O3Y_11530 PF02875 Mur ligase family, glutamate ligase domain O3Y_11530 PF08245 Mur ligase middle domain O3Y_11535 PF03717 Penicillin-binding Protein dimerisation domain O3Y_11535 PF00905 Penicillin binding protein transpeptidase domain O3Y_11540 PF04999 Cell division protein FtsL O3Y_11545 PF01795 MraW methylase family O3Y_11550 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_11550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain O3Y_11555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) O3Y_11555 PF00364 Biotin-requiring enzyme O3Y_11555 PF02817 e3 binding domain O3Y_11560 PF17831 Pyruvate dehydrogenase E1 component middle domain O3Y_11560 PF00456 Transketolase, thiamine diphosphate binding domain O3Y_11565 PF00392 Bacterial regulatory proteins, gntR family O3Y_11565 PF07729 FCD domain O3Y_11570 PF02872 5'-nucleotidase, C-terminal domain O3Y_11570 PF00149 Calcineurin-like phosphoesterase O3Y_11575 PF02272 DHHA1 domain O3Y_11575 PF17768 RecJ OB domain O3Y_11575 PF01368 DHH family O3Y_11580 PF13098 Thioredoxin-like domain O3Y_11580 PF10411 Disulfide bond isomerase protein N-terminus O3Y_11585 PF02899 Phage integrase, N-terminal SAM-like domain O3Y_11585 PF00589 Phage integrase family O3Y_11590 PF00258 Flavodoxin O3Y_11595 PF01510 N-acetylmuramoyl-L-alanine amidase O3Y_11600 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain O3Y_11600 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain O3Y_11605 PF00114 Pilin (bacterial filament) O3Y_11605 PF07963 Prokaryotic N-terminal methylation motif O3Y_11610 PF00437 Type II/IV secretion system protein O3Y_11610 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain O3Y_11615 PF00482 Type II secretion system (T2SS), protein F O3Y_11620 PF01478 Type IV leader peptidase family O3Y_11620 PF06750 Bacterial Peptidase A24 N-terminal domain O3Y_11625 PF01121 Dephospho-CoA kinase O3Y_11630 PF07072 Cell division protein O3Y_11640 PF03884 DNA gyrase inhibitor YacG O3Y_11645 PF00521 DNA gyrase/topoisomerase IV, subunit A O3Y_11645 PF03989 DNA gyrase C-terminal domain, beta-propeller O3Y_11650 PF01751 Toprim domain O3Y_11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_11650 PF00986 DNA gyrase B subunit, carboxyl terminus O3Y_11650 PF00204 DNA gyrase B O3Y_11655 PF05728 Uncharacterised protein family (UPF0227) O3Y_11660 PF00149 Calcineurin-like phosphoesterase O3Y_11665 PF06853 Protein of unknown function (DUF1249) O3Y_11670 PF00293 NUDIX domain O3Y_11675 PF02321 Outer membrane efflux protein O3Y_11680 PF00294 pfkB family carbohydrate kinase O3Y_11680 PF01467 Cytidylyltransferase-like O3Y_11685 PF08335 GlnD PII-uridylyltransferase O3Y_11685 PF03710 Glutamate-ammonia ligase adenylyltransferase O3Y_11690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_11690 PF02743 Cache domain O3Y_11690 PF00672 HAMP domain O3Y_11695 PF01928 CYTH domain O3Y_11700 PF01865 Protein of unknown function DUF47 O3Y_11705 PF01384 Phosphate transporter family O3Y_11710 PF08239 Bacterial SH3 domain O3Y_11720 PF13401 AAA domain O3Y_11720 PF01471 Putative peptidoglycan binding domain O3Y_11725 PF12627 Probable RNA and SrmB- binding site of polymerase A O3Y_11725 PF01743 Poly A polymerase head domain O3Y_11725 PF01966 HD domain O3Y_11730 PF00113 Enolase, C-terminal TIM barrel domain O3Y_11730 PF03952 Enolase, N-terminal domain O3Y_11735 PF06418 CTP synthase N-terminus O3Y_11735 PF00117 Glutamine amidotransferase class-I O3Y_11745 PF03819 MazG nucleotide pyrophosphohydrolase domain O3Y_11750 PF02824 TGS domain O3Y_11750 PF13291 ACT domain O3Y_11750 PF04607 Region found in RelA / SpoT proteins O3Y_11755 PF05958 tRNA (Uracil-5-)-methyltransferase O3Y_11755 PF01938 TRAM domain O3Y_11760 PF00512 His Kinase A (phospho-acceptor) domain O3Y_11760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) O3Y_11760 PF00672 HAMP domain O3Y_11760 PF00072 Response regulator receiver domain O3Y_11760 PF01627 Hpt domain O3Y_11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_11765 PF00563 EAL domain O3Y_11765 PF00990 Diguanylate cyclase, GGDEF domain O3Y_11780 PF01648 4'-phosphopantetheinyl transferase superfamily O3Y_11785 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ O3Y_11790 PF11967 Recombination protein O N terminal O3Y_11790 PF02565 Recombination protein O C terminal O3Y_11795 PF01926 50S ribosome-binding GTPase O3Y_11795 PF07650 KH domain O3Y_11800 PF14622 Ribonuclease-III-like O3Y_11800 PF00035 Double-stranded RNA binding motif O3Y_11805 PF10502 Signal peptidase, peptidase S26 O3Y_11810 PF06421 GTP-binding protein LepA C-terminus O3Y_11810 PF00009 Elongation factor Tu GTP binding domain O3Y_11810 PF00679 Elongation factor G C-terminus O3Y_11810 PF03144 Elongation factor Tu domain 2 O3Y_11820 PF03888 MucB/RseB N-terminal domain O3Y_11820 PF17188 MucB/RseB C-terminal domain O3Y_11825 PF03872 Anti sigma-E protein RseA, N-terminal domain O3Y_11825 PF03873 Anti sigma-E protein RseA, C-terminal domain O3Y_11830 PF04542 Sigma-70 region 2 O3Y_11830 PF08281 Sigma-70, region 4 O3Y_11835 PF02910 Fumarate reductase flavoprotein C-term O3Y_11835 PF00890 FAD binding domain O3Y_11845 PF03937 Flavinator of succinate dehydrogenase O3Y_11860 PF01494 FAD binding domain O3Y_11865 PF01494 FAD binding domain O3Y_11870 PF03695 Uncharacterised protein family (UPF0149) O3Y_11875 PF05164 Cell division protein ZapA O3Y_11880 PF01812 5-formyltetrahydrofolate cyclo-ligase family O3Y_11885 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) O3Y_11890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain O3Y_11890 PF01842 ACT domain O3Y_11890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain O3Y_11895 PF10369 Small subunit of acetolactate synthase O3Y_11900 PF00205 Thiamine pyrophosphate enzyme, central domain O3Y_11900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain O3Y_11900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain O3Y_11905 PF00501 AMP-binding enzyme O3Y_11910 PF03466 LysR substrate binding domain O3Y_11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_11920 PF01569 PAP2 superfamily O3Y_11930 PF08502 LeuA allosteric (dimerisation) domain O3Y_11930 PF00682 HMGL-like O3Y_11935 PF00180 Isocitrate/isopropylmalate dehydrogenase O3Y_11940 PF00330 Aconitase family (aconitate hydratase) O3Y_11945 PF00694 Aconitase C-terminal domain O3Y_11955 PF00072 Response regulator receiver domain O3Y_11965 PF03739 Lipopolysaccharide export system permease LptF/LptG O3Y_11970 PF03739 Lipopolysaccharide export system permease LptF/LptG O3Y_11975 PF02789 Cytosol aminopeptidase family, N-terminal domain O3Y_11975 PF00883 Cytosol aminopeptidase family, catalytic domain O3Y_11980 PF04364 DNA polymerase III chi subunit, HolC O3Y_11985 PF08264 Anticodon-binding domain of tRNA O3Y_11985 PF10458 Valyl tRNA synthetase tRNA binding arm O3Y_11985 PF00133 tRNA synthetases class I (I, L, M and V) O3Y_11990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain O3Y_11990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain O3Y_11995 PF00849 RNA pseudouridylate synthase O3Y_12000 PF18337 RapA N-terminal Tudor like domain O3Y_12000 PF18339 RapA N-terminal Tudor like domain 1 O3Y_12000 PF00176 SNF2 family N-terminal domain O3Y_12000 PF12137 RNA polymerase recycling family C-terminal O3Y_12000 PF00271 Helicase conserved C-terminal domain O3Y_12010 PF13638 PIN domain O3Y_12010 PF02562 PhoH-like protein O3Y_12015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain O3Y_12015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain O3Y_12025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain O3Y_12025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain O3Y_12030 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain O3Y_12030 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain O3Y_12035 PF01042 Endoribonuclease L-PSP O3Y_12040 PF01553 Acyltransferase O3Y_12045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) O3Y_12050 PF01722 BolA-like protein O3Y_12060 PF05494 MlaC protein O3Y_12065 PF02470 MlaD protein O3Y_12070 PF02405 Permease MlaE O3Y_12075 PF00005 ABC transporter O3Y_12080 PF01699 Sodium/calcium exchanger protein O3Y_12085 PF00571 CBS domain O3Y_12085 PF01380 SIS domain O3Y_12100 PF03968 OstA-like protein O3Y_12105 PF12399 Branched-chain amino acid ATP-binding cassette transporter O3Y_12105 PF00005 ABC transporter O3Y_12110 PF04552 Sigma-54, DNA binding domain O3Y_12110 PF00309 Sigma-54 factor, Activator interacting domain (AID) O3Y_12110 PF04963 Sigma-54 factor, core binding domain O3Y_12115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein O3Y_12120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 O3Y_12125 PF03668 P-loop ATPase protein family O3Y_12130 PF00381 PTS HPr component phosphorylation site O3Y_12135 PF01769 Divalent cation transporter O3Y_12135 PF03448 MgtE intracellular N domain O3Y_12135 PF00571 CBS domain O3Y_12140 PF01523 Putative modulator of DNA gyrase O3Y_12145 PF04751 Protein of unknown function (DUF615) O3Y_12150 PF00005 ABC transporter O3Y_12155 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_12165 PF02441 Flavoprotein O3Y_12170 PF02875 Mur ligase family, glutamate ligase domain O3Y_12170 PF01225 Mur ligase family, catalytic domain O3Y_12170 PF08245 Mur ligase middle domain O3Y_12175 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain O3Y_12180 PF00719 Inorganic pyrophosphatase O3Y_12185 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like O3Y_12190 PF04357 TamB, inner membrane protein subunit of TAM complex O3Y_12195 PF01103 Surface antigen O3Y_12195 PF17243 POTRA domain TamA domain 1 O3Y_12195 PF07244 Surface antigen variable number repeat O3Y_12200 PF01625 Peptide methionine sulfoxide reductase O3Y_12205 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) O3Y_12210 PF10795 Protein of unknown function (DUF2607) O3Y_12220 PF00005 ABC transporter O3Y_12245 PF00009 Elongation factor Tu GTP binding domain O3Y_12250 PF01507 Phosphoadenosine phosphosulfate reductase family O3Y_12255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases O3Y_12255 PF14824 Sirohaem biosynthesis protein central O3Y_12255 PF10414 Sirohaem synthase dimerisation region O3Y_12260 PF00149 Calcineurin-like phosphoesterase O3Y_12260 PF02872 5'-nucleotidase, C-terminal domain O3Y_12270 PF00270 DEAD/DEAH box helicase O3Y_12270 PF00271 Helicase conserved C-terminal domain O3Y_12270 PF03880 DbpA RNA binding domain O3Y_12275 PF13673 Acetyltransferase (GNAT) domain O3Y_12280 PF00892 EamA-like transporter family O3Y_12285 PF04225 Opacity-associated protein A LysM-like domain O3Y_12285 PF08525 Opacity-associated protein A N-terminal motif O3Y_12290 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase O3Y_12290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase O3Y_12300 PF01196 Ribosomal protein L17 O3Y_12305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain O3Y_12305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain O3Y_12305 PF01000 RNA polymerase Rpb3/RpoA insert domain O3Y_12310 PF01479 S4 domain O3Y_12310 PF00163 Ribosomal protein S4/S9 N-terminal domain O3Y_12315 PF00411 Ribosomal protein S11 O3Y_12320 PF00416 Ribosomal protein S13/S18 O3Y_12325 PF00444 Ribosomal protein L36 O3Y_12330 PF00344 SecY translocase O3Y_12335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A O3Y_12340 PF00327 Ribosomal protein L30p/L7e O3Y_12345 PF03719 Ribosomal protein S5, C-terminal domain O3Y_12345 PF00333 Ribosomal protein S5, N-terminal domain O3Y_12350 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast O3Y_12355 PF00347 Ribosomal protein L6 O3Y_12360 PF00410 Ribosomal protein S8 O3Y_12365 PF00253 Ribosomal protein S14p/S29e O3Y_12370 PF00281 Ribosomal protein L5 O3Y_12370 PF00673 ribosomal L5P family C-terminus O3Y_12375 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 O3Y_12375 PF00467 KOW motif O3Y_12380 PF00238 Ribosomal protein L14p/L23e O3Y_12385 PF00366 Ribosomal protein S17 O3Y_12390 PF00831 Ribosomal L29 protein O3Y_12395 PF00252 Ribosomal protein L16p/L10e O3Y_12400 PF07650 KH domain O3Y_12400 PF00189 Ribosomal protein S3, C-terminal domain O3Y_12405 PF00237 Ribosomal protein L22p/L17e O3Y_12410 PF00203 Ribosomal protein S19 O3Y_12415 PF00181 Ribosomal Proteins L2, RNA binding domain O3Y_12415 PF03947 Ribosomal Proteins L2, C-terminal domain O3Y_12420 PF00276 Ribosomal protein L23 O3Y_12425 PF00573 Ribosomal protein L4/L1 family O3Y_12430 PF00297 Ribosomal protein L3 O3Y_12435 PF00338 Ribosomal protein S10p/S20e O3Y_12440 PF08032 RNA 2'-O ribose methyltransferase substrate binding O3Y_12440 PF00588 SpoU rRNA Methylase family O3Y_12445 PF08206 Ribonuclease B OB domain O3Y_12445 PF17876 Cold shock domain O3Y_12445 PF08461 Ribonuclease R winged-helix domain O3Y_12445 PF00773 RNB domain O3Y_12445 PF00575 S1 RNA binding domain O3Y_12450 PF00884 Sulfatase O3Y_12450 PF11893 Domain of unknown function (DUF3413) O3Y_12455 PF08238 Sel1 repeat O3Y_12460 PF00709 Adenylosuccinate synthetase O3Y_12465 PF01112 Asparaginase O3Y_12470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase O3Y_12480 PF00999 Sodium/hydrogen exchanger family O3Y_12480 PF02254 TrkA-N domain O3Y_12485 PF02525 Flavodoxin-like fold O3Y_12490 PF00005 ABC transporter O3Y_12490 PF12848 ABC transporter O3Y_12500 PF00561 alpha/beta hydrolase fold O3Y_12505 PF06794 Uncharacterised protein family (UPF0270) O3Y_12510 PF00485 Phosphoribulokinase / Uridine kinase family O3Y_12515 PF13545 Crp-like helix-turn-helix domain O3Y_12515 PF00027 Cyclic nucleotide-binding domain O3Y_12525 PF00171 Aldehyde dehydrogenase family O3Y_12530 PF04958 Arginine N-succinyltransferase beta subunit O3Y_12535 PF00202 Aminotransferase class-III O3Y_12540 PF00117 Glutamine amidotransferase class-I O3Y_12545 PF04055 Radical SAM superfamily O3Y_12545 PF00919 Uncharacterized protein family UPF0004 O3Y_12545 PF18693 TRAM domain O3Y_12560 PF00579 tRNA synthetases class I (W and Y) O3Y_12565 PF13419 Haloacid dehalogenase-like hydrolase O3Y_12570 PF00834 Ribulose-phosphate 3 epimerase family O3Y_12575 PF02086 D12 class N6 adenine-specific DNA methyltransferase O3Y_12585 PF01761 3-dehydroquinate synthase O3Y_12590 PF01202 Shikimate kinase O3Y_12595 PF00263 Bacterial type II and III secretion system protein O3Y_12595 PF11741 AMIN domain O3Y_12595 PF03958 Bacterial type II/III secretion system short domain O3Y_12595 PF07660 Secretin and TonB N terminus short domain O3Y_12620 PF00905 Penicillin binding protein transpeptidase domain O3Y_12620 PF17092 Penicillin-binding protein OB-like domain O3Y_12620 PF00912 Transglycosylase O3Y_12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_12625 PF03466 LysR substrate binding domain O3Y_12630 PF08534 Redoxin O3Y_12630 PF00462 Glutaredoxin O3Y_12635 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_12635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain O3Y_12645 PF14698 Argininosuccinate lyase C-terminal O3Y_12645 PF00206 Lyase O3Y_12650 PF00764 Arginosuccinate synthase O3Y_12655 PF00696 Amino acid kinase family O3Y_12660 PF01118 Semialdehyde dehydrogenase, NAD binding domain O3Y_12660 PF02774 Semialdehyde dehydrogenase, dimerisation domain O3Y_12665 PF07687 Peptidase dimerisation domain O3Y_12665 PF01546 Peptidase family M20/M25/M40 O3Y_12670 PF00311 Phosphoenolpyruvate carboxylase O3Y_12680 PF06426 Serine acetyltransferase, N-terminal O3Y_12680 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_12685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus O3Y_12685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus O3Y_12690 PF02556 Preprotein translocase subunit SecB O3Y_12695 PF00581 Rhodanese-like domain O3Y_12700 PF00152 tRNA synthetases class II (D, K and N) O3Y_12705 PF00890 FAD binding domain O3Y_12705 PF02910 Fumarate reductase flavoprotein C-term O3Y_12710 PF13183 4Fe-4S dicluster domain O3Y_12710 PF13085 2Fe-2S iron-sulfur cluster binding domain O3Y_12715 PF02300 Fumarate reductase subunit C O3Y_12720 PF02313 Fumarate reductase subunit D O3Y_12725 PF09285 Elongation factor P, C-terminal O3Y_12725 PF08207 Elongation factor P (EF-P) KOW-like domain O3Y_12725 PF01132 Elongation factor P (EF-P) OB domain O3Y_12730 PF04055 Radical SAM superfamily O3Y_12740 PF00118 TCP-1/cpn60 chaperonin family O3Y_12745 PF00166 Chaperonin 10 Kd subunit O3Y_12750 PF00455 DeoR C terminal sensor domain O3Y_12750 PF08220 DeoR-like helix-turn-helix domain O3Y_12770 PF00121 Triosephosphate isomerase O3Y_12780 PF03737 Aldolase/RraA O3Y_12785 PF01040 UbiA prenyltransferase family O3Y_12790 PF00004 ATPase family associated with various cellular activities (AAA) O3Y_12790 PF07724 AAA domain (Cdc48 subfamily) O3Y_12790 PF10431 C-terminal, D2-small domain, of ClpB protein O3Y_12795 PF00227 Proteasome subunit O3Y_12800 PF05036 Sporulation related domain O3Y_12805 PF00356 Bacterial regulatory proteins, lacI family O3Y_12810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain O3Y_12810 PF18074 Primosomal protein N C-terminal domain O3Y_12810 PF17764 3′ DNA-binding domain (3′BD) O3Y_12810 PF00271 Helicase conserved C-terminal domain O3Y_12810 PF00270 DEAD/DEAH box helicase O3Y_12815 PF01197 Ribosomal protein L31 O3Y_12820 PF00390 Malic enzyme, N-terminal domain O3Y_12820 PF03949 Malic enzyme, NAD binding domain O3Y_12825 PF01340 Met Apo-repressor, MetJ O3Y_12830 PF01053 Cys/Met metabolism PLP-dependent enzyme O3Y_12835 PF00696 Amino acid kinase family O3Y_12835 PF00742 Homoserine dehydrogenase O3Y_12835 PF03447 Homoserine dehydrogenase, NAD binding domain O3Y_12845 PF02219 Methylenetetrahydrofolate reductase O3Y_12850 PF06005 Cell division protein ZapB O3Y_12855 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded O3Y_12860 PF00365 Phosphofructokinase O3Y_12865 PF16916 Dimerisation domain of Zinc Transporter O3Y_12865 PF01545 Cation efflux family O3Y_12875 PF00072 Response regulator receiver domain O3Y_12875 PF00486 Transcriptional regulatory protein, C terminal O3Y_12880 PF00512 His Kinase A (phospho-acceptor) domain O3Y_12880 PF00672 HAMP domain O3Y_12880 PF16527 Two-component sensor protein CpxA, periplasmic domain O3Y_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_12885 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain O3Y_12885 PF02777 Iron/manganese superoxide dismutases, C-terminal domain O3Y_12890 PF00588 SpoU rRNA Methylase family O3Y_12895 PF04186 FxsA cytoplasmic membrane protein O3Y_12900 PF17158 Membrane-associated sensor, integral membrane domain O3Y_12900 PF00990 Diguanylate cyclase, GGDEF domain O3Y_12905 PF00206 Lyase O3Y_12905 PF10415 Fumarase C C-terminus O3Y_12910 PF03605 Anaerobic c4-dicarboxylate membrane transporter O3Y_12920 PF03714 Bacterial pullanase-associated domain O3Y_12920 PF18494 Pullulanase Ins domain O3Y_12920 PF17967 Pullulanase N2 domain O3Y_12920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) O3Y_12920 PF11852 Domain of unknown function (DUF3372) O3Y_12925 PF11412 Disulphide bond corrector protein DsbC O3Y_12925 PF02683 Cytochrome C biogenesis protein transmembrane region O3Y_12930 PF00072 Response regulator receiver domain O3Y_12930 PF00196 Bacterial regulatory proteins, luxR family O3Y_12935 PF03471 Transporter associated domain O3Y_12935 PF00999 Sodium/hydrogen exchanger family O3Y_12935 PF02080 TrkA-C domain O3Y_12945 PF00474 Sodium:solute symporter family O3Y_12950 PF02592 Putative vitamin uptake transporter O3Y_12955 PF00625 Guanylate kinase O3Y_12960 PF01192 RNA polymerase Rpb6 O3Y_12965 PF04607 Region found in RelA / SpoT proteins O3Y_12965 PF13291 ACT domain O3Y_12965 PF02824 TGS domain O3Y_12970 PF17191 RecG wedge domain O3Y_12970 PF00271 Helicase conserved C-terminal domain O3Y_12970 PF00270 DEAD/DEAH box helicase O3Y_12975 PF00860 Permease family O3Y_12980 PF00512 His Kinase A (phospho-acceptor) domain O3Y_12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_12980 PF00672 HAMP domain O3Y_12985 PF00486 Transcriptional regulatory protein, C terminal O3Y_12985 PF00072 Response regulator receiver domain O3Y_12990 PF03449 Transcription elongation factor, N-terminal O3Y_12990 PF01272 Transcription elongation factor, GreA/GreB, C-term O3Y_12995 PF09371 Tex-like protein N-terminal domain O3Y_12995 PF00575 S1 RNA binding domain O3Y_12995 PF17674 HHH domain O3Y_12995 PF16921 Tex protein YqgF-like domain O3Y_13005 PF00561 alpha/beta hydrolase fold O3Y_13010 PF00156 Phosphoribosyl transferase domain O3Y_13015 PF01106 NifU-like domain O3Y_13015 PF01521 Iron-sulphur cluster biosynthesis O3Y_13020 PF00293 NUDIX domain O3Y_13025 PF00459 Inositol monophosphatase family O3Y_13030 PF01203 Type II secretion system (T2SS), protein N O3Y_13035 PF04612 Type II secretion system (T2SS), protein M O3Y_13040 PF05134 Type II secretion system (T2SS), protein L O3Y_13040 PF12693 GspL periplasmic domain O3Y_13045 PF03934 Type II secretion system (T2SS), protein K O3Y_13050 PF11612 Type II secretion system (T2SS), protein J O3Y_13050 PF07963 Prokaryotic N-terminal methylation motif O3Y_13055 PF02501 Type II secretion system (T2SS), protein I O3Y_13055 PF07963 Prokaryotic N-terminal methylation motif O3Y_13060 PF12019 Type II transport protein GspH O3Y_13065 PF08334 Type II secretion system (T2SS), protein G O3Y_13065 PF07963 Prokaryotic N-terminal methylation motif O3Y_13070 PF00482 Type II secretion system (T2SS), protein F O3Y_13075 PF00437 Type II/IV secretion system protein O3Y_13080 PF00263 Bacterial type II and III secretion system protein O3Y_13080 PF03958 Bacterial type II/III secretion system short domain O3Y_13085 PF11356 Type II secretion system protein C O3Y_13090 PF01479 S4 domain O3Y_13095 PF01430 Hsp33 protein O3Y_13100 PF01293 Phosphoenolpyruvate carboxykinase O3Y_13110 PF00583 Acetyltransferase (GNAT) family O3Y_13110 PF09500 Putative thioesterase (yiiD_Cterm) O3Y_13115 PF02580 D-Tyr-tRNA(Tyr) deacylase O3Y_13120 PF03631 Virulence factor BrkB O3Y_13135 PF00120 Glutamine synthetase, catalytic domain O3Y_13135 PF03951 Glutamine synthetase, beta-Grasp domain O3Y_13145 PF00512 His Kinase A (phospho-acceptor) domain O3Y_13145 PF00989 PAS fold O3Y_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_13150 PF02954 Bacterial regulatory protein, Fis family O3Y_13150 PF00158 Sigma-54 interaction domain O3Y_13150 PF00072 Response regulator receiver domain O3Y_13155 PF13188 PAS domain O3Y_13155 PF00990 Diguanylate cyclase, GGDEF domain O3Y_13155 PF03707 Bacterial signalling protein N terminal repeat O3Y_13155 PF00563 EAL domain O3Y_13160 PF00962 Adenosine/AMP deaminase O3Y_13170 PF12724 Flavodoxin domain O3Y_13175 PF02386 Cation transport protein O3Y_13180 PF01205 Uncharacterized protein family UPF0029 O3Y_13180 PF09186 Domain of unknown function (DUF1949) O3Y_13185 PF00378 Enoyl-CoA hydratase/isomerase O3Y_13185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain O3Y_13185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain O3Y_13190 PF02803 Thiolase, C-terminal domain O3Y_13190 PF00108 Thiolase, N-terminal domain O3Y_13195 PF03466 LysR substrate binding domain O3Y_13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_13200 PF07690 Major Facilitator Superfamily O3Y_13205 PF12804 MobA-like NTP transferase domain O3Y_13205 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_13210 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain O3Y_13210 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain O3Y_13215 PF02874 ATP synthase alpha/beta family, beta-barrel domain O3Y_13215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain O3Y_13220 PF00231 ATP synthase O3Y_13225 PF02874 ATP synthase alpha/beta family, beta-barrel domain O3Y_13225 PF00306 ATP synthase alpha/beta chain, C terminal domain O3Y_13225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain O3Y_13230 PF00213 ATP synthase delta (OSCP) subunit O3Y_13235 PF00430 ATP synthase B/B' CF(0) O3Y_13240 PF00137 ATP synthase subunit C O3Y_13245 PF00119 ATP synthase A chain O3Y_13250 PF03899 ATP synthase I chain O3Y_13255 PF17762 HTH domain found in ParB protein O3Y_13255 PF02195 ParB-like nuclease domain O3Y_13260 PF13614 AAA domain O3Y_13265 PF02527 rRNA small subunit methyltransferase G O3Y_13270 PF01134 Glucose inhibited division protein A O3Y_13270 PF13932 GidA associated domain O3Y_13533 PF01709 Transcriptional regulator O3Y_13538 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase O3Y_13538 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase O3Y_13543 PF17200 Single Cache domain 2 O3Y_13543 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_13543 PF00672 HAMP domain O3Y_13548 PF10928 Protein of unknown function (DUF2810) O3Y_13553 PF17874 MalT-like TPR region O3Y_13553 PF00196 Bacterial regulatory proteins, luxR family O3Y_13558 PF00343 Carbohydrate phosphorylase O3Y_13563 PF02446 4-alpha-glucanotransferase O3Y_13568 PF00128 Alpha amylase, catalytic domain O3Y_13568 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) O3Y_13568 PF02806 Alpha amylase, C-terminal all-beta domain O3Y_13573 PF05638 Type VI secretion system effector, Hcp O3Y_13578 PF16671 Actin cross-linking domain O3Y_13578 PF04717 Type VI secretion system, phage-baseplate injector O3Y_13603 PF00842 Alanine racemase, C-terminal domain O3Y_13603 PF01757 Acyltransferase family O3Y_13603 PF01168 Alanine racemase, N-terminal domain O3Y_13613 PF00939 Sodium:sulfate symporter transmembrane region O3Y_13618 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) O3Y_13623 PF08329 Chitinase A, N-terminal domain O3Y_13623 PF00704 Glycosyl hydrolases family 18 O3Y_13643 PF02743 Cache domain O3Y_13643 PF00672 HAMP domain O3Y_13643 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_13663 PF01569 PAP2 superfamily O3Y_13668 PF00375 Sodium:dicarboxylate symporter family O3Y_13678 PF02630 SCO1/SenC O3Y_13693 PF03616 Sodium/glutamate symporter O3Y_13698 PF12945 Flagellar protein YcgR O3Y_13698 PF07238 PilZ domain O3Y_13713 PF00529 HlyD membrane-fusion protein of T1SS O3Y_13713 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion O3Y_13718 PF11742 Protein of unknown function (DUF3302) O3Y_13723 PF00990 Diguanylate cyclase, GGDEF domain O3Y_13738 PF01048 Phosphorylase superfamily O3Y_13743 PF08349 Protein of unknown function (DUF1722) O3Y_13748 PF13411 MerR HTH family regulatory protein O3Y_13753 PF03441 FAD binding domain of DNA photolyase O3Y_13753 PF00875 DNA photolyase O3Y_13758 PF03734 L,D-transpeptidase catalytic domain O3Y_13758 PF01476 LysM domain O3Y_13758 PF17969 L,D-transpeptidase C-terminal domain O3Y_13768 PF00271 Helicase conserved C-terminal domain O3Y_13768 PF00270 DEAD/DEAH box helicase O3Y_13773 PF00326 Prolyl oligopeptidase family O3Y_13773 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain O3Y_13778 PF00593 TonB dependent receptor O3Y_13778 PF07715 TonB-dependent Receptor Plug Domain O3Y_13798 PF12729 Four helix bundle sensory module for signal transduction O3Y_13798 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_13798 PF00672 HAMP domain O3Y_13803 PF12849 PBP superfamily domain O3Y_13808 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_13813 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_13818 PF00005 ABC transporter O3Y_13823 PF00563 EAL domain O3Y_13823 PF00990 Diguanylate cyclase, GGDEF domain O3Y_13823 PF03707 Bacterial signalling protein N terminal repeat O3Y_13838 PF00916 Sulfate permease family O3Y_13838 PF01740 STAS domain O3Y_13848 PF01551 Peptidase family M23 O3Y_13848 PF01476 LysM domain O3Y_13848 PF08525 Opacity-associated protein A N-terminal motif O3Y_13853 PF00563 EAL domain O3Y_13853 PF03707 Bacterial signalling protein N terminal repeat O3Y_13853 PF00990 Diguanylate cyclase, GGDEF domain O3Y_13853 PF13188 PAS domain O3Y_13858 PF03466 LysR substrate binding domain O3Y_13858 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_13863 PF07690 Major Facilitator Superfamily O3Y_13868 PF00376 MerR family regulatory protein O3Y_13868 PF09278 MerR, DNA binding O3Y_13888 PF00375 Sodium:dicarboxylate symporter family O3Y_13898 PF02001 Protein of unknown function DUF134 O3Y_13918 PF02868 Thermolysin metallopeptidase, alpha-helical domain O3Y_13918 PF07504 Fungalysin/Thermolysin Propeptide Motif O3Y_13918 PF01483 Proprotein convertase P-domain O3Y_13918 PF01447 Thermolysin metallopeptidase, catalytic domain O3Y_13928 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family O3Y_13928 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain O3Y_13933 PF02894 Oxidoreductase family, C-terminal alpha/beta domain O3Y_13933 PF01408 Oxidoreductase family, NAD-binding Rossmann fold O3Y_13938 PF00581 Rhodanese-like domain O3Y_13943 PF00563 EAL domain O3Y_13943 PF00196 Bacterial regulatory proteins, luxR family O3Y_13948 PF13419 Haloacid dehalogenase-like hydrolase O3Y_13953 PF00916 Sulfate permease family O3Y_13953 PF01740 STAS domain O3Y_13958 PF00849 RNA pseudouridylate synthase O3Y_14018 PF00004 ATPase family associated with various cellular activities (AAA) O3Y_14018 PF07724 AAA domain (Cdc48 subfamily) O3Y_14018 PF17871 AAA lid domain O3Y_14018 PF10431 C-terminal, D2-small domain, of ClpB protein O3Y_14053 PF16671 Actin cross-linking domain O3Y_14053 PF04717 Type VI secretion system, phage-baseplate injector O3Y_14068 PF05025 RbsD / FucU transport protein family O3Y_14073 PF00005 ABC transporter O3Y_14078 PF02653 Branched-chain amino acid transport system / permease component O3Y_14083 PF13407 Periplasmic binding protein domain O3Y_14088 PF00294 pfkB family carbohydrate kinase O3Y_14093 PF00356 Bacterial regulatory proteins, lacI family O3Y_14098 PF04973 Nicotinamide mononucleotide transporter O3Y_14103 PF04973 Nicotinamide mononucleotide transporter O3Y_14108 PF01048 Phosphorylase superfamily O3Y_14118 PF03009 Glycerophosphoryl diester phosphodiesterase family O3Y_14123 PF07690 Major Facilitator Superfamily O3Y_14138 PF02743 Cache domain O3Y_14138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_14138 PF00512 His Kinase A (phospho-acceptor) domain O3Y_14143 PF00158 Sigma-54 interaction domain O3Y_14143 PF02954 Bacterial regulatory protein, Fis family O3Y_14143 PF00072 Response regulator receiver domain O3Y_14163 PF01266 FAD dependent oxidoreductase O3Y_14168 PF12561 ToxR activated gene A lipoprotein domain O3Y_14168 PF00041 Fibronectin type III domain O3Y_14173 PF01327 Polypeptide deformylase O3Y_14183 PF03334 Na+/H+ antiporter subunit O3Y_14188 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) O3Y_14208 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter O3Y_14208 PF13244 Domain of unknown function (DUF4040) O3Y_14208 PF00361 Proton-conducting membrane transporter O3Y_14208 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus O3Y_14218 PF00582 Universal stress protein family O3Y_14223 PF03222 Tryptophan/tyrosine permease family O3Y_14228 PF01212 Beta-eliminating lyase O3Y_14233 PF12843 Putative quorum-sensing-regulated virulence factor O3Y_14243 PF00563 EAL domain O3Y_14243 PF08448 PAS fold O3Y_14243 PF00990 Diguanylate cyclase, GGDEF domain O3Y_14248 PF00313 'Cold-shock' DNA-binding domain O3Y_14263 PF13519 von Willebrand factor type A domain O3Y_14263 PF07584 Aerotolerance regulator N-terminal O3Y_14278 PF01882 Protein of unknown function DUF58 O3Y_14283 PF07726 ATPase family associated with various cellular activities (AAA) O3Y_14283 PF17863 AAA lid domain O3Y_14288 PF02743 Cache domain O3Y_14288 PF00672 HAMP domain O3Y_14288 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_14308 PF01773 Na+ dependent nucleoside transporter N-terminus O3Y_14308 PF07662 Na+ dependent nucleoside transporter C-terminus O3Y_14308 PF07670 Nucleoside recognition O3Y_14313 PF01546 Peptidase family M20/M25/M40 O3Y_14313 PF07687 Peptidase dimerisation domain O3Y_14323 PF00158 Sigma-54 interaction domain O3Y_14323 PF01590 GAF domain O3Y_14328 PF00175 Oxidoreductase NAD-binding domain O3Y_14328 PF00970 Oxidoreductase FAD-binding domain O3Y_14328 PF00042 Globin O3Y_14333 PF00313 'Cold-shock' DNA-binding domain O3Y_14338 PF03889 Alternative ribosome-rescue factor A O3Y_14358 PF00072 Response regulator receiver domain O3Y_14368 PF01256 Carbohydrate kinase O3Y_14368 PF03853 YjeF-related protein N-terminus O3Y_14373 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain O3Y_14373 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain O3Y_14383 PF07885 Ion channel O3Y_14393 PF00478 IMP dehydrogenase / GMP reductase domain O3Y_14398 PF00145 C-5 cytosine-specific DNA methylase O3Y_14423 PF01797 Transposase IS200 like O3Y_14428 PF00271 Helicase conserved C-terminal domain O3Y_14428 PF00270 DEAD/DEAH box helicase O3Y_14433 PF03605 Anaerobic c4-dicarboxylate membrane transporter O3Y_14438 PF02540 NAD synthase O3Y_14443 PF01467 Cytidylyltransferase-like O3Y_14448 PF11849 Domain of unknown function (DUF3369) O3Y_14453 PF00512 His Kinase A (phospho-acceptor) domain O3Y_14453 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_14453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_14463 PF03553 Na+/H+ antiporter family O3Y_14468 PF07690 Major Facilitator Superfamily O3Y_14478 PF08448 PAS fold O3Y_14478 PF00990 Diguanylate cyclase, GGDEF domain O3Y_14483 PF00657 GDSL-like Lipase/Acylhydrolase O3Y_14488 PF07968 Leukocidin/Hemolysin toxin family O3Y_14488 PF12563 Hemolytic toxin N terminal O3Y_14488 PF16458 Beta-prism lectin O3Y_14493 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_14493 PF12729 Four helix bundle sensory module for signal transduction O3Y_14493 PF00672 HAMP domain O3Y_14498 PF00561 alpha/beta hydrolase fold O3Y_14503 PF03280 Proteobacterial lipase chaperone protein O3Y_14508 PF00801 PKD domain O3Y_14508 PF05547 Immune inhibitor A peptidase M6 O3Y_14528 PF01032 FecCD transport family O3Y_14533 PF01032 FecCD transport family O3Y_14538 PF00005 ABC transporter O3Y_14543 PF12833 Helix-turn-helix domain O3Y_14548 PF00593 TonB dependent receptor O3Y_14548 PF07715 TonB-dependent Receptor Plug Domain O3Y_14558 PF00871 Acetokinase family O3Y_14573 PF00672 HAMP domain O3Y_14573 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_14573 PF00512 His Kinase A (phospho-acceptor) domain O3Y_14578 PF00486 Transcriptional regulatory protein, C terminal O3Y_14578 PF00072 Response regulator receiver domain O3Y_14593 PF01261 Xylose isomerase-like TIM barrel O3Y_14598 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family O3Y_14608 PF00596 Class II Aldolase and Adducin N-terminal domain O3Y_14613 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 O3Y_14618 PF03611 PTS system sugar-specific permease component O3Y_14623 PF00455 DeoR C terminal sensor domain O3Y_14623 PF08220 DeoR-like helix-turn-helix domain O3Y_14633 PF01292 Prokaryotic cytochrome b561 O3Y_14638 PF00128 Alpha amylase, catalytic domain O3Y_14643 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_14663 PF00072 Response regulator receiver domain O3Y_14663 PF00486 Transcriptional regulatory protein, C terminal O3Y_14668 PF14827 Double sensory domain of two-component sensor kinase O3Y_14668 PF00672 HAMP domain O3Y_14668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_14668 PF00512 His Kinase A (phospho-acceptor) domain O3Y_14668 PF13426 PAS domain O3Y_14708 PF07690 Major Facilitator Superfamily O3Y_14713 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_14713 PF02743 Cache domain O3Y_14713 PF00672 HAMP domain O3Y_14723 PF00768 D-alanyl-D-alanine carboxypeptidase O3Y_14723 PF07943 Penicillin-binding protein 5, C-terminal domain O3Y_14738 PF00194 Eukaryotic-type carbonic anhydrase O3Y_14743 PF01797 Transposase IS200 like O3Y_14748 PF02347 Glycine cleavage system P-protein O3Y_14753 PF01597 Glycine cleavage H-protein O3Y_14758 PF00464 Serine hydroxymethyltransferase O3Y_14768 PF01571 Aminomethyltransferase folate-binding domain O3Y_14768 PF08669 Glycine cleavage T-protein C-terminal barrel domain O3Y_14778 PF01609 Transposase DDE domain O3Y_14778 PF05598 Transposase domain (DUF772) O3Y_14803 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain O3Y_14803 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) O3Y_14803 PF02824 TGS domain O3Y_14803 PF03129 Anticodon binding domain O3Y_14808 PF00707 Translation initiation factor IF-3, C-terminal domain O3Y_14808 PF05198 Translation initiation factor IF-3, N-terminal domain O3Y_14813 PF01632 Ribosomal protein L35 O3Y_14818 PF00453 Ribosomal protein L20 O3Y_14823 PF00589 Phage integrase family O3Y_14823 PF13495 Phage integrase, N-terminal SAM-like domain O3Y_14868 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_14913 PF01966 HD domain O3Y_14913 PF13286 Phosphohydrolase-associated domain O3Y_14938 PF00293 NUDIX domain O3Y_14953 PF13302 Acetyltransferase (GNAT) domain O3Y_14958 PF08212 Lipocalin-like domain O3Y_14988 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ O3Y_14998 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_15053 PF17676 LD-carboxypeptidase C-terminal domain O3Y_15053 PF02016 LD-carboxypeptidase N-terminal domain O3Y_15073 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_15098 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_15113 PF08212 Lipocalin-like domain O3Y_15133 PF04229 GrpB protein O3Y_15143 PF01810 LysE type translocator O3Y_15178 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH O3Y_15238 PF00665 Integrase core domain O3Y_15243 PF01527 Transposase O3Y_15343 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB O3Y_15348 PF01381 Helix-turn-helix O3Y_15363 PF02567 Phenazine biosynthesis-like protein O3Y_15393 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_15418 PF08212 Lipocalin-like domain O3Y_15473 PF13302 Acetyltransferase (GNAT) domain O3Y_15573 PF02016 LD-carboxypeptidase N-terminal domain O3Y_15573 PF17676 LD-carboxypeptidase C-terminal domain O3Y_15593 PF08212 Lipocalin-like domain O3Y_15598 PF05016 ParE toxin of type II toxin-antitoxin system, parDE O3Y_15613 PF01555 DNA methylase O3Y_15653 PF12833 Helix-turn-helix domain O3Y_15653 PF01965 DJ-1/PfpI family O3Y_15703 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_15733 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system O3Y_15738 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA O3Y_15753 PF01609 Transposase DDE domain O3Y_15753 PF05598 Transposase domain (DUF772) O3Y_15758 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_15773 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_15783 PF05016 ParE toxin of type II toxin-antitoxin system, parDE O3Y_15843 PF07859 alpha/beta hydrolase fold O3Y_15858 PF01797 Transposase IS200 like O3Y_15918 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_15923 PF01527 Transposase O3Y_15928 PF00665 Integrase core domain O3Y_15938 PF13597 Anaerobic ribonucleoside-triphosphate reductase O3Y_15938 PF03477 ATP cone domain O3Y_15948 PF00155 Aminotransferase class I and II O3Y_15953 PF08443 RimK-like ATP-grasp domain O3Y_15953 PF18030 RimK PreATP-grasp domain O3Y_15958 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit O3Y_15958 PF02378 Phosphotransferase system, EIIC O3Y_15963 PF00294 pfkB family carbohydrate kinase O3Y_15968 PF00381 PTS HPr component phosphorylation site O3Y_15968 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 O3Y_15973 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family O3Y_15973 PF00356 Bacterial regulatory proteins, lacI family O3Y_15978 PF12320 Type 5 capsule protein repressor C-terminal domain O3Y_15978 PF00149 Calcineurin-like phosphoesterase O3Y_15983 PF13476 AAA domain O3Y_15988 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_15988 PF00072 Response regulator receiver domain O3Y_15993 PF00155 Aminotransferase class I and II O3Y_16003 PF00654 Voltage gated chloride channel O3Y_16008 PF02492 CobW/HypB/UreG, nucleotide-binding domain O3Y_16008 PF07683 Cobalamin synthesis protein cobW C-terminal domain O3Y_16013 PF01926 50S ribosome-binding GTPase O3Y_16018 PF02705 K+ potassium transporter O3Y_16023 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain O3Y_16023 PF10371 Domain of unknown function O3Y_16023 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg O3Y_16023 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase O3Y_16023 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II O3Y_16028 PF00512 His Kinase A (phospho-acceptor) domain O3Y_16028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_16028 PF13493 Domain of unknown function (DUF4118) O3Y_16028 PF02702 Osmosensitive K+ channel His kinase sensor domain O3Y_16033 PF00072 Response regulator receiver domain O3Y_16033 PF00486 Transcriptional regulatory protein, C terminal O3Y_16038 PF02416 mttA/Hcf106 family O3Y_16043 PF09335 SNARE associated Golgi protein O3Y_16058 PF00563 EAL domain O3Y_16058 PF10388 EAL-domain associated signalling protein domain O3Y_16068 PF01292 Prokaryotic cytochrome b561 O3Y_16073 PF04264 YceI-like domain O3Y_16078 PF01226 Formate/nitrite transporter O3Y_16088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_16088 PF03466 LysR substrate binding domain O3Y_16093 PF06496 Protein of unknown function (DUF1097) O3Y_16098 PF11398 Protein of unknown function (DUF2813) O3Y_16103 PF02872 5'-nucleotidase, C-terminal domain O3Y_16103 PF00149 Calcineurin-like phosphoesterase O3Y_16108 PF03741 Integral membrane protein TerC family O3Y_16118 PF03831 PhnA domain O3Y_16118 PF08274 PhnA Zinc-Ribbon O3Y_16148 PF00990 Diguanylate cyclase, GGDEF domain O3Y_16148 PF17151 Periplasmic sensor domain O3Y_16163 PF00990 Diguanylate cyclase, GGDEF domain O3Y_16163 PF17158 Membrane-associated sensor, integral membrane domain O3Y_16178 PF05222 Alanine dehydrogenase/PNT, N-terminal domain O3Y_16178 PF01262 Alanine dehydrogenase/PNT, C-terminal domain O3Y_16178 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch O3Y_16183 PF02233 NAD(P) transhydrogenase beta subunit O3Y_16193 PF00072 Response regulator receiver domain O3Y_16193 PF00486 Transcriptional regulatory protein, C terminal O3Y_16208 PF03701 Uncharacterised protein family (UPF0181) O3Y_16213 PF01253 Translation initiation factor SUI1 O3Y_16223 PF01820 D-ala D-ala ligase N-terminus O3Y_16223 PF07478 D-ala D-ala ligase C-terminus O3Y_16233 PF00583 Acetyltransferase (GNAT) family O3Y_16233 PF13607 Succinyl-CoA ligase like flavodoxin domain O3Y_16233 PF13380 CoA binding domain O3Y_16238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_16238 PF03466 LysR substrate binding domain O3Y_16243 PF07715 TonB-dependent Receptor Plug Domain O3Y_16243 PF00593 TonB dependent receptor O3Y_16248 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle O3Y_16248 PF12793 Sugar transport-related sRNA regulator N-term O3Y_16258 PF03061 Thioesterase superfamily O3Y_16278 PF00043 Glutathione S-transferase, C-terminal domain O3Y_16278 PF02798 Glutathione S-transferase, N-terminal domain O3Y_16293 PF12804 MobA-like NTP transferase domain O3Y_16293 PF03479 Plants and Prokaryotes Conserved (PCC) domain O3Y_16293 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_16298 PF00005 ABC transporter O3Y_16298 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_16303 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_16303 PF12911 N-terminal TM domain of oligopeptide transport permease C O3Y_16308 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_16313 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle O3Y_16338 PF00854 POT family O3Y_16348 PF00392 Bacterial regulatory proteins, gntR family O3Y_16348 PF07702 UTRA domain O3Y_16353 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_16358 PF00005 ABC transporter O3Y_16368 PF00266 Aminotransferase class-V O3Y_16378 PF13419 Haloacid dehalogenase-like hydrolase O3Y_16383 PF01272 Transcription elongation factor, GreA/GreB, C-term O3Y_16383 PF14760 Rnk N-terminus O3Y_16388 PF13419 Haloacid dehalogenase-like hydrolase O3Y_16403 PF01741 Large-conductance mechanosensitive channel, MscL O3Y_16408 PF01268 Formate--tetrahydrofolate ligase O3Y_16413 PF01641 SelR domain O3Y_16413 PF01625 Peptide methionine sulfoxide reductase O3Y_16418 PF01227 GTP cyclohydrolase I O3Y_16423 PF00994 Probable molybdopterin binding domain O3Y_16423 PF03454 MoeA C-terminal region (domain IV) O3Y_16423 PF03453 MoeA N-terminal region (domain I and II) O3Y_16428 PF00899 ThiF family O3Y_16438 PF00581 Rhodanese-like domain O3Y_16443 PF04198 Putative sugar-binding domain O3Y_16453 PF00923 Transaldolase/Fructose-6-phosphate aldolase O3Y_16458 PF02779 Transketolase, pyrimidine binding domain O3Y_16458 PF02780 Transketolase, C-terminal domain O3Y_16458 PF00456 Transketolase, thiamine diphosphate binding domain O3Y_16473 PF01043 SecA preprotein cross-linking domain O3Y_16473 PF07517 SecA DEAD-like domain O3Y_16473 PF07516 SecA Wing and Scaffold domain O3Y_16473 PF02810 SEC-C motif O3Y_16483 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain O3Y_16483 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain O3Y_16498 PF06942 GlpM protein O3Y_16508 PF03466 LysR substrate binding domain O3Y_16508 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_16513 PF03992 Antibiotic biosynthesis monooxygenase O3Y_16518 PF00881 Nitroreductase family O3Y_16523 PF00873 AcrB/AcrD/AcrF family O3Y_16538 PF04143 Sulphur transport O3Y_16553 PF07992 Pyridine nucleotide-disulphide oxidoreductase O3Y_16553 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain O3Y_16613 PF00251 Glycosyl hydrolases family 32 N-terminal domain O3Y_16613 PF08244 Glycosyl hydrolases family 32 C terminal O3Y_16618 PF00294 pfkB family carbohydrate kinase O3Y_16623 PF01266 FAD dependent oxidoreductase O3Y_16623 PF16901 C-terminal domain of alpha-glycerophosphate oxidase O3Y_16628 PF00672 HAMP domain O3Y_16628 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_16633 PF13488 Glycine zipper O3Y_16633 PF00691 OmpA family O3Y_16638 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase O3Y_16638 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase O3Y_16643 PF13419 Haloacid dehalogenase-like hydrolase O3Y_16648 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_16648 PF00672 HAMP domain O3Y_16648 PF12729 Four helix bundle sensory module for signal transduction O3Y_16653 PF03606 C4-dicarboxylate anaerobic carrier O3Y_16658 PF03315 Serine dehydratase beta chain O3Y_16658 PF03313 Serine dehydratase alpha chain O3Y_16663 PF00474 Sodium:solute symporter family O3Y_16678 PF00356 Bacterial regulatory proteins, lacI family O3Y_16683 PF00196 Bacterial regulatory proteins, luxR family O3Y_16683 PF00072 Response regulator receiver domain O3Y_16688 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term O3Y_16688 PF07730 Histidine kinase O3Y_16688 PF00672 HAMP domain O3Y_16688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_16693 PF12838 4Fe-4S dicluster domain O3Y_16693 PF13187 4Fe-4S dicluster domain O3Y_16703 PF01568 Molydopterin dinucleotide binding domain O3Y_16703 PF00384 Molybdopterin oxidoreductase O3Y_16703 PF04879 Molybdopterin oxidoreductase Fe4S4 domain O3Y_16708 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) O3Y_16713 PF03264 NapC/NirT cytochrome c family, N-terminal region O3Y_16723 PF01966 HD domain O3Y_16728 PF00072 Response regulator receiver domain O3Y_16728 PF00196 Bacterial regulatory proteins, luxR family O3Y_16733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_16733 PF07730 Histidine kinase O3Y_16733 PF05231 MASE1 O3Y_16738 PF07690 Major Facilitator Superfamily O3Y_16748 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_16753 PF00005 ABC transporter O3Y_16753 PF08402 TOBE domain O3Y_16758 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus O3Y_16768 PF00108 Thiolase, N-terminal domain O3Y_16768 PF02803 Thiolase, C-terminal domain O3Y_16773 PF00106 short chain dehydrogenase O3Y_16778 PF07549 SecD/SecF GG Motif O3Y_16778 PF02355 Protein export membrane protein O3Y_16783 PF07549 SecD/SecF GG Motif O3Y_16783 PF13721 SecD export protein N-terminal TM region O3Y_16783 PF02355 Protein export membrane protein O3Y_16798 PF17158 Membrane-associated sensor, integral membrane domain O3Y_16798 PF00990 Diguanylate cyclase, GGDEF domain O3Y_16803 PF00483 Nucleotidyl transferase O3Y_16808 PF00704 Glycosyl hydrolases family 18 O3Y_16808 PF06483 Chitinase C O3Y_16813 PF00465 Iron-containing alcohol dehydrogenase O3Y_16823 PF02954 Bacterial regulatory protein, Fis family O3Y_16823 PF00072 Response regulator receiver domain O3Y_16823 PF14532 Sigma-54 interaction domain O3Y_16828 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_16828 PF02743 Cache domain O3Y_16828 PF00512 His Kinase A (phospho-acceptor) domain O3Y_16838 PF07690 Major Facilitator Superfamily O3Y_16843 PF00224 Pyruvate kinase, barrel domain O3Y_16843 PF02887 Pyruvate kinase, alpha/beta domain O3Y_16848 PF00072 Response regulator receiver domain O3Y_16848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_16848 PF00672 HAMP domain O3Y_16848 PF00512 His Kinase A (phospho-acceptor) domain O3Y_16848 PF01627 Hpt domain O3Y_16853 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family O3Y_16858 PF02142 MGS-like domain O3Y_16863 PF00857 Isochorismatase family O3Y_16868 PF01219 Prokaryotic diacylglycerol kinase O3Y_16883 PF12462 DNA helicase IV / RNA helicase N terminal O3Y_16883 PF00580 UvrD/REP helicase N-terminal domain O3Y_16883 PF13361 UvrD-like helicase C-terminal domain O3Y_16888 PF12805 FUSC-like inner membrane protein yccS O3Y_16893 PF00512 His Kinase A (phospho-acceptor) domain O3Y_16893 PF08448 PAS fold O3Y_16893 PF13188 PAS domain O3Y_16893 PF00072 Response regulator receiver domain O3Y_16893 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_16918 PF03459 TOBE domain O3Y_16918 PF00005 ABC transporter O3Y_16923 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_16933 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain O3Y_16933 PF07685 CobB/CobQ-like glutamine amidotransferase domain O3Y_16973 PF00512 His Kinase A (phospho-acceptor) domain O3Y_16973 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_16973 PF00072 Response regulator receiver domain O3Y_16973 PF09308 LuxQ, periplasmic O3Y_16978 PF13407 Periplasmic binding protein domain O3Y_16988 PF01541 GIY-YIG catalytic domain O3Y_16993 PF04337 Protein of unknown function, DUF480 O3Y_17003 PF04363 Protein of unknown function (DUF496) O3Y_17018 PF00370 FGGY family of carbohydrate kinases, N-terminal domain O3Y_17018 PF02782 FGGY family of carbohydrate kinases, C-terminal domain O3Y_17023 PF00230 Major intrinsic protein O3Y_17028 PF04324 BFD-like [2Fe-2S] binding domain O3Y_17028 PF01266 FAD dependent oxidoreductase O3Y_17033 PF00890 FAD binding domain O3Y_17038 PF13183 4Fe-4S dicluster domain O3Y_17038 PF02754 Cysteine-rich domain O3Y_17043 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III O3Y_17043 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal O3Y_17048 PF00085 Thioredoxin O3Y_17053 PF07690 Major Facilitator Superfamily O3Y_17068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_17068 PF03466 LysR substrate binding domain O3Y_17073 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_17078 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_17083 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_17088 PF00005 ABC transporter O3Y_17093 PF05762 VWA domain containing CoxE-like protein O3Y_17098 PF12592 Protein of unknown function (DUF3763) O3Y_17098 PF07728 AAA domain (dynein-related subfamily) O3Y_17098 PF17868 AAA lid domain O3Y_17103 PF00293 NUDIX domain O3Y_17108 PF01212 Beta-eliminating lyase O3Y_17113 PF00034 Cytochrome c O3Y_17118 PF00440 Bacterial regulatory proteins, tetR family O3Y_17118 PF08361 MAATS-type transcriptional repressor, C-terminal region O3Y_17123 PF00271 Helicase conserved C-terminal domain O3Y_17123 PF00270 DEAD/DEAH box helicase O3Y_17128 PF04336 Acyl carrier protein phosphodiesterase O3Y_17138 PF03222 Tryptophan/tyrosine permease family O3Y_17143 PF12729 Four helix bundle sensory module for signal transduction O3Y_17143 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_17143 PF00672 HAMP domain O3Y_17148 PF16363 GDP-mannose 4,6 dehydratase O3Y_17153 PF03746 LamB/YcsF family O3Y_17163 PF02626 Carboxyltransferase domain, subdomain A and B O3Y_17173 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain O3Y_17173 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain O3Y_17183 PF00005 ABC transporter O3Y_17188 PF13472 GDSL-like Lipase/Acylhydrolase family O3Y_17193 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase O3Y_17193 PF07055 Enoyl reductase FAD binding domain O3Y_17193 PF12241 Trans-2-enoyl-CoA reductase catalytic region O3Y_17198 PF00990 Diguanylate cyclase, GGDEF domain O3Y_17198 PF00498 FHA domain O3Y_17198 PF00563 EAL domain O3Y_17213 PF00226 DnaJ domain O3Y_17213 PF00684 DnaJ central domain O3Y_17213 PF01556 DnaJ C terminal domain O3Y_17228 PF00665 Integrase core domain O3Y_17233 PF01527 Transposase O3Y_17248 PF02796 Helix-turn-helix domain of resolvase O3Y_17248 PF00239 Resolvase, N terminal domain O3Y_17258 PF13419 Haloacid dehalogenase-like hydrolase O3Y_17273 PF00294 pfkB family carbohydrate kinase O3Y_17278 PF00884 Sulfatase O3Y_17288 PF03880 DbpA RNA binding domain O3Y_17288 PF00270 DEAD/DEAH box helicase O3Y_17288 PF00271 Helicase conserved C-terminal domain O3Y_17293 PF08206 Ribonuclease B OB domain O3Y_17293 PF00575 S1 RNA binding domain O3Y_17293 PF00773 RNB domain O3Y_17303 PF12849 PBP superfamily domain O3Y_17308 PF01575 MaoC like domain O3Y_17313 PF04244 Deoxyribodipyrimidine photo-lyase-related protein O3Y_17318 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading O3Y_17318 PF18416 N-acetylglucosamine binding protein domain 2 O3Y_17323 PF03413 Peptidase propeptide and YPEB domain O3Y_17323 PF07504 Fungalysin/Thermolysin Propeptide Motif O3Y_17323 PF01447 Thermolysin metallopeptidase, catalytic domain O3Y_17323 PF04151 Bacterial pre-peptidase C-terminal domain O3Y_17323 PF02868 Thermolysin metallopeptidase, alpha-helical domain O3Y_17328 PF04389 Peptidase family M28 O3Y_17328 PF04151 Bacterial pre-peptidase C-terminal domain O3Y_17333 PF00491 Arginase family O3Y_17338 PF17944 Arginine decarboxylase C-terminal helical extension O3Y_17338 PF17810 Arginine decarboxylase helical bundle domain O3Y_17338 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain O3Y_17348 PF03448 MgtE intracellular N domain O3Y_17348 PF01769 Divalent cation transporter O3Y_17348 PF00571 CBS domain O3Y_17353 PF00166 Chaperonin 10 Kd subunit O3Y_17358 PF00118 TCP-1/cpn60 chaperonin family O3Y_17368 PF13840 ACT domain O3Y_17368 PF00696 Amino acid kinase family O3Y_17373 PF06339 Ectoine synthase O3Y_17378 PF00202 Aminotransferase class-III O3Y_17383 PF00583 Acetyltransferase (GNAT) family O3Y_17388 PF01329 Pterin 4 alpha carbinolamine dehydratase O3Y_17393 PF00351 Biopterin-dependent aromatic amino acid hydroxylase O3Y_17398 PF00501 AMP-binding enzyme O3Y_17398 PF13193 AMP-binding enzyme C-terminal domain O3Y_17413 PF03466 LysR substrate binding domain O3Y_17413 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_17423 PF00892 EamA-like transporter family O3Y_17428 PF00132 Bacterial transferase hexapeptide (six repeats) O3Y_17428 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal O3Y_17428 PF14602 Hexapeptide repeat of succinyl-transferase O3Y_17433 PF00571 CBS domain O3Y_17433 PF03471 Transporter associated domain O3Y_17433 PF01595 Cyclin M transmembrane N-terminal domain O3Y_17438 PF02566 OsmC-like protein O3Y_17443 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region O3Y_17448 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain O3Y_17448 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain O3Y_17463 PF13520 Amino acid permease O3Y_17468 PF00990 Diguanylate cyclase, GGDEF domain O3Y_17478 PF04397 LytTr DNA-binding domain O3Y_17478 PF00072 Response regulator receiver domain O3Y_17483 PF06580 Histidine kinase O3Y_17483 PF07694 5TMR of 5TMR-LYT O3Y_17483 PF13492 GAF domain O3Y_17483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_17498 PF00005 ABC transporter O3Y_17498 PF02687 FtsX-like permease family O3Y_17498 PF12704 MacB-like periplasmic core domain O3Y_17503 PF00005 ABC transporter O3Y_17518 PF00248 Aldo/keto reductase family O3Y_17523 PF00128 Alpha amylase, catalytic domain O3Y_17538 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) O3Y_17543 PF12262 Bacterial virulence factor lipase N-terminal O3Y_17548 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_17548 PF08447 PAS fold O3Y_17548 PF13426 PAS domain O3Y_17553 PF07504 Fungalysin/Thermolysin Propeptide Motif O3Y_17553 PF03413 Peptidase propeptide and YPEB domain O3Y_17553 PF01447 Thermolysin metallopeptidase, catalytic domain O3Y_17553 PF02868 Thermolysin metallopeptidase, alpha-helical domain O3Y_17553 PF04151 Bacterial pre-peptidase C-terminal domain O3Y_17558 PF03922 OmpW family O3Y_17563 PF00768 D-alanyl-D-alanine carboxypeptidase O3Y_17568 PF00155 Aminotransferase class I and II O3Y_17568 PF00392 Bacterial regulatory proteins, gntR family O3Y_17573 PF01654 Cytochrome bd terminal oxidase subunit I O3Y_17578 PF02322 Cytochrome bd terminal oxidase subunit II O3Y_17593 PF00291 Pyridoxal-phosphate dependent enzyme O3Y_17598 PF03466 LysR substrate binding domain O3Y_17598 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_17638 PF00107 Zinc-binding dehydrogenase O3Y_17638 PF08240 Alcohol dehydrogenase GroES-like domain O3Y_17643 PF00155 Aminotransferase class I and II O3Y_17663 PF03466 LysR substrate binding domain O3Y_17663 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_17668 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily O3Y_17693 PF01966 HD domain O3Y_17698 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain O3Y_17698 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain O3Y_17703 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase O3Y_17708 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain O3Y_17708 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase O3Y_17733 PF02595 Glycerate kinase family O3Y_17738 PF02447 GntP family permease O3Y_17743 PF13556 PucR C-terminal helix-turn-helix domain O3Y_17743 PF17853 GGDEF-like domain O3Y_17743 PF05651 Putative sugar diacid recognition O3Y_17748 PF00672 HAMP domain O3Y_17748 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_17753 PF01243 Pyridoxamine 5'-phosphate oxidase O3Y_17758 PF06228 Haem utilisation ChuX/HutX O3Y_17763 PF04055 Radical SAM superfamily O3Y_17768 PF03544 Gram-negative bacterial TonB protein C-terminal O3Y_17773 PF01618 MotA/TolQ/ExbB proton channel family O3Y_17778 PF02472 Biopolymer transport protein ExbD/TolR O3Y_17783 PF01497 Periplasmic binding protein O3Y_17788 PF01032 FecCD transport family O3Y_17793 PF00005 ABC transporter O3Y_17823 PF00672 HAMP domain O3Y_17823 PF02743 Cache domain O3Y_17823 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_17828 PF00111 2Fe-2S iron-sulfur cluster binding domain O3Y_17828 PF03473 MOSC domain O3Y_17828 PF03476 MOSC N-terminal beta barrel domain O3Y_17828 PF03476 MOSC N-terminal beta barrel domain O3Y_17828 PF03473 MOSC domain O3Y_17828 PF00111 2Fe-2S iron-sulfur cluster binding domain O3Y_17833 PF01979 Amidohydrolase family O3Y_17843 PF05656 Protein of unknown function (DUF805) O3Y_17853 PF05958 tRNA (Uracil-5-)-methyltransferase O3Y_17858 PF05661 Protein of unknown function (DUF808) O3Y_17868 PF00313 'Cold-shock' DNA-binding domain O3Y_17893 PF08448 PAS fold O3Y_17893 PF00990 Diguanylate cyclase, GGDEF domain O3Y_17898 PF08220 DeoR-like helix-turn-helix domain O3Y_17898 PF00455 DeoR C terminal sensor domain O3Y_17913 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_17918 PF14785 Maltose transport system permease protein MalF P2 domain O3Y_17918 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_17923 PF01547 Bacterial extracellular solute-binding protein O3Y_17928 PF08402 TOBE domain O3Y_17928 PF00005 ABC transporter O3Y_17933 PF13302 Acetyltransferase (GNAT) domain O3Y_17948 PF01906 Putative heavy-metal-binding O3Y_17953 PF00196 Bacterial regulatory proteins, luxR family O3Y_17963 PF01584 CheW-like domain O3Y_17963 PF00072 Response regulator receiver domain O3Y_17968 PF01047 MarR family O3Y_17973 PF00990 Diguanylate cyclase, GGDEF domain O3Y_17988 PF00563 EAL domain O3Y_17988 PF00990 Diguanylate cyclase, GGDEF domain O3Y_17988 PF03707 Bacterial signalling protein N terminal repeat O3Y_18008 PF03466 LysR substrate binding domain O3Y_18008 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_18013 PF00563 EAL domain O3Y_18013 PF00990 Diguanylate cyclase, GGDEF domain O3Y_18023 PF05726 Pirin C-terminal cupin domain O3Y_18023 PF02678 Pirin O3Y_18028 PF06865 Pyrimidine/purine nucleoside phosphorylase O3Y_18038 PF07690 Major Facilitator Superfamily O3Y_18048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18048 PF17200 Single Cache domain 2 O3Y_18048 PF00672 HAMP domain O3Y_18053 PF05362 Lon protease (S16) C-terminal proteolytic domain O3Y_18053 PF13654 AAA domain O3Y_18063 PF00005 ABC transporter O3Y_18063 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_18068 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_18073 PF08447 PAS fold O3Y_18073 PF13426 PAS domain O3Y_18073 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_18088 PF03466 LysR substrate binding domain O3Y_18093 PF02652 L-lactate permease O3Y_18098 PF01070 FMN-dependent dehydrogenase O3Y_18108 PF03618 Kinase/pyrophosphorylase O3Y_18113 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain O3Y_18113 PF02896 PEP-utilising enzyme, TIM barrel domain O3Y_18113 PF00391 PEP-utilising enzyme, mobile domain O3Y_18118 PF08447 PAS fold O3Y_18118 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18123 PF01554 MatE O3Y_18128 PF00270 DEAD/DEAH box helicase O3Y_18128 PF00271 Helicase conserved C-terminal domain O3Y_18133 PF03466 LysR substrate binding domain O3Y_18133 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_18143 PF00724 NADH:flavin oxidoreductase / NADH oxidase family O3Y_18158 PF00664 ABC transporter transmembrane region O3Y_18158 PF00005 ABC transporter O3Y_18168 PF00724 NADH:flavin oxidoreductase / NADH oxidase family O3Y_18178 PF01810 LysE type translocator O3Y_18183 PF12833 Helix-turn-helix domain O3Y_18198 PF01557 Fumarylacetoacetate (FAA) hydrolase family O3Y_18203 PF01047 MarR family O3Y_18208 PF02566 OsmC-like protein O3Y_18213 PF13609 Gram-negative porin O3Y_18218 PF00892 EamA-like transporter family O3Y_18223 PF00462 Glutaredoxin O3Y_18228 PF07670 Nucleoside recognition O3Y_18233 PF07670 Nucleoside recognition O3Y_18238 PF03600 Citrate transporter O3Y_18248 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain O3Y_18248 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain O3Y_18253 PF06029 AlkA N-terminal domain O3Y_18253 PF00730 HhH-GPD superfamily base excision DNA repair protein O3Y_18258 PF07681 DoxX O3Y_18263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_18263 PF03466 LysR substrate binding domain O3Y_18283 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase O3Y_18293 PF07148 Maltose operon periplasmic protein precursor (MalM) O3Y_18298 PF02264 LamB porin O3Y_18303 PF00128 Alpha amylase, catalytic domain O3Y_18303 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) O3Y_18313 PF12729 Four helix bundle sensory module for signal transduction O3Y_18313 PF00672 HAMP domain O3Y_18313 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18328 PF00672 HAMP domain O3Y_18328 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18338 PF00793 DAHP synthetase I family O3Y_18343 PF00005 ABC transporter O3Y_18348 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_18353 PF00497 Bacterial extracellular solute-binding proteins, family 3 O3Y_18358 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_18363 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I O3Y_18363 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain O3Y_18363 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II O3Y_18363 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III O3Y_18373 PF04225 Opacity-associated protein A LysM-like domain O3Y_18373 PF01551 Peptidase family M23 O3Y_18378 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 O3Y_18378 PF02378 Phosphotransferase system, EIIC O3Y_18378 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit O3Y_18383 PF08125 Mannitol dehydrogenase C-terminal domain O3Y_18383 PF01232 Mannitol dehydrogenase Rossmann domain O3Y_18388 PF05068 Mannitol repressor O3Y_18393 PF01408 Oxidoreductase family, NAD-binding Rossmann fold O3Y_18423 PF13460 NAD(P)H-binding O3Y_18428 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_18428 PF03466 LysR substrate binding domain O3Y_18433 PF00672 HAMP domain O3Y_18433 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18433 PF02743 Cache domain O3Y_18438 PF00106 short chain dehydrogenase O3Y_18443 PF03466 LysR substrate binding domain O3Y_18443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family O3Y_18448 PF04013 Putative SAM-dependent RNA methyltransferase O3Y_18453 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase O3Y_18458 PF13520 Amino acid permease O3Y_18463 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain O3Y_18463 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain O3Y_18463 PF01276 Orn/Lys/Arg decarboxylase, major domain O3Y_18473 PF00171 Aldehyde dehydrogenase family O3Y_18478 PF01037 Lrp/AsnC ligand binding domain O3Y_18483 PF02743 Cache domain O3Y_18483 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18483 PF00672 HAMP domain O3Y_18493 PF00474 Sodium:solute symporter family O3Y_18503 PF00171 Aldehyde dehydrogenase family O3Y_18503 PF01619 Proline dehydrogenase O3Y_18503 PF18327 Proline utilization A proline dehydrogenase N-terminal domain O3Y_18503 PF14850 DNA-binding domain of Proline dehydrogenase O3Y_18508 PF12833 Helix-turn-helix domain O3Y_18518 PF03781 Sulfatase-modifying factor enzyme 1 O3Y_18523 PF00072 Response regulator receiver domain O3Y_18523 PF00196 Bacterial regulatory proteins, luxR family O3Y_18528 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region O3Y_18528 PF01243 Pyridoxamine 5'-phosphate oxidase O3Y_18533 PF00529 HlyD membrane-fusion protein of T1SS O3Y_18548 PF00005 ABC transporter O3Y_18548 PF03412 Peptidase C39 family O3Y_18548 PF00664 ABC transporter transmembrane region O3Y_18558 PF00486 Transcriptional regulatory protein, C terminal O3Y_18558 PF00072 Response regulator receiver domain O3Y_18568 PF02743 Cache domain O3Y_18568 PF00672 HAMP domain O3Y_18568 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18573 PF01339 CheB methylesterase O3Y_18573 PF00072 Response regulator receiver domain O3Y_18578 PF03975 CheD chemotactic sensory transduction O3Y_18583 PF03705 CheR methyltransferase, all-alpha domain O3Y_18583 PF01739 CheR methyltransferase, SAM binding domain O3Y_18588 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain O3Y_18588 PF00672 HAMP domain O3Y_18588 PF02203 Tar ligand binding domain homologue O3Y_18593 PF01584 CheW-like domain O3Y_18598 PF01584 CheW-like domain O3Y_18603 PF01584 CheW-like domain O3Y_18603 PF09078 CheY binding O3Y_18603 PF02895 Signal transducing histidine kinase, homodimeric domain O3Y_18603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_18603 PF01627 Hpt domain O3Y_18608 PF00072 Response regulator receiver domain O3Y_18623 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_18628 PF12911 N-terminal TM domain of oligopeptide transport permease C O3Y_18628 PF00528 Binding-protein-dependent transport system inner membrane component O3Y_18633 PF08352 Oligopeptide/dipeptide transporter, C-terminal region O3Y_18633 PF00005 ABC transporter O3Y_18638 PF08019 Phosphoethanolamine transferase EptA/EptB O3Y_18638 PF00884 Sulfatase O3Y_18643 PF08521 Two-component sensor kinase N-terminal O3Y_18643 PF00512 His Kinase A (phospho-acceptor) domain O3Y_18643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase O3Y_18648 PF00486 Transcriptional regulatory protein, C terminal O3Y_18648 PF00072 Response regulator receiver domain O3Y_18668 PF00501 AMP-binding enzyme O3Y_18678 PF05127 Helicase O3Y_18678 PF13718 GNAT acetyltransferase 2 O3Y_18683 PF13416 Bacterial extracellular solute-binding protein O3Y_18688 PF02195 ParB-like nuclease domain O3Y_18688 PF08775 ParB family O3Y_18693 PF13614 AAA domain O3Y_18693 PF18607 ParA helix turn helix domain