O3Y_00020	SM01234	O3Y_00020
O3Y_00035	SM00382	ATPases associated with a variety of cellular activities
O3Y_00045	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_00050	SM00382	ATPases associated with a variety of cellular activities
O3Y_00050	SM00760	Bacterial dnaA protein helix-turn-helix domain
O3Y_00055	SM00480	DNA polymerase III beta subunit
O3Y_00065	SM00387	Histidine kinase-like ATPases
O3Y_00065	SM00433	TopoisomeraseII
O3Y_00120	SM00829	Enoylreductase
O3Y_00150	SM00382	ATPases associated with a variety of cellular activities
O3Y_00155	SM00563	Phosphate acyltransferases
O3Y_00220	SM00257	Lysin motif
O3Y_00245	SM01001	AIR carboxylase
O3Y_00310	SM00876	Biotin and Thiamin Synthesis associated domain
O3Y_00335	SM00344	helix_turn_helix ASNC type
O3Y_00340	SM00052	Putative diguanylate phosphodiesterase
O3Y_00340	SM00091	PAS domain
O3Y_00340	SM00267	diguanylate cyclase
O3Y_00440	SM00563	Phosphate acyltransferases
O3Y_00460	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
O3Y_00460	SM00091	PAS domain
O3Y_00460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_00470	SM00450	Rhodanese Homology Domain
O3Y_00480	SM01004	Delta-aminolevulinic acid dehydratase
O3Y_00490	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
O3Y_00490	SM00474	3'-5' exonuclease
O3Y_00490	SM00475	5'-3' exonuclease
O3Y_00490	SM00482	DNA polymerase A domain
O3Y_00520	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_00550	SM01219	O3Y_00550
O3Y_00585	SM00052	Putative diguanylate phosphodiesterase
O3Y_00585	SM00267	diguanylate cyclase
O3Y_00585	SM00897	FIST N domain
O3Y_00585	SM01204	O3Y_00585
O3Y_00590	SM01144	O3Y_00590
O3Y_00660	SM00382	ATPases associated with a variety of cellular activities
O3Y_00660	SM00962	SRP54-type protein, GTPase domain
O3Y_00660	SM00963	SRP54-type protein, helical bundle domain
O3Y_00665	SM00382	ATPases associated with a variety of cellular activities
O3Y_00715	SM00360	RNA recognition motif
O3Y_00765	SM00382	ATPases associated with a variety of cellular activities
O3Y_00800	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_00880	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_00895	SM00341	Helicase and RNase D C-terminal
O3Y_00895	SM00487	DEAD-like helicases superfamily
O3Y_00895	SM00490	helicase superfamily c-terminal domain
O3Y_00895	SM00956	O3Y_00895
O3Y_00910	SM00382	ATPases associated with a variety of cellular activities
O3Y_00920	SM00382	ATPases associated with a variety of cellular activities
O3Y_00990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_00990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_00990	SM01049	O3Y_00990
O3Y_01015	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
O3Y_01015	SM01232	O3Y_01015
O3Y_01140	SM00382	ATPases associated with a variety of cellular activities
O3Y_01230	SM00849	Metallo-beta-lactamase superfamily
O3Y_01230	SM01027	Beta-Casp domain
O3Y_01240	SM00986	Uracil DNA glycosylase superfamily
O3Y_01240	SM00987	UreE urease accessory protein, C-terminal domain 
O3Y_01270	SM00411	bacterial (prokaryotic) histone like domain
O3Y_01280	SM01209	O3Y_01280
O3Y_01280	SM01210	O3Y_01280
O3Y_01285	SM00798	AICARFT/IMPCHase bienzyme
O3Y_01285	SM00851	MGS-like domain
O3Y_01290	SM00422	helix_turn_helix, mercury resistance
O3Y_01295	SM00862	Transcriptional regulatory protein, C terminal
O3Y_01310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_01310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_01310	SM01049	O3Y_01310
O3Y_01350	SM00354	helix_turn _helix lactose operon repressor
O3Y_01370	SM00878	Biotin carboxylase C-terminal domain
O3Y_01390	SM00479	O3Y_01390
O3Y_01405	SM00387	Histidine kinase-like ATPases
O3Y_01405	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_01405	SM00448	cheY-homologous receiver domain
O3Y_01415	SM00487	DEAD-like helicases superfamily
O3Y_01415	SM00490	helicase superfamily c-terminal domain
O3Y_01425	SM00357	Cold shock protein domain
O3Y_01425	SM00382	ATPases associated with a variety of cellular activities
O3Y_01425	SM00959	Rho termination factor, N-terminal domain
O3Y_01450	SM00155	Phospholipase D. Active site motifs.
O3Y_01485	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
O3Y_01485	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
O3Y_01490	SM00649	Ribosomal protein L11/L12
O3Y_01515	SM00663	RNA polymerase I subunit A N-terminus
O3Y_01575	SM00479	O3Y_01575
O3Y_01590	SM00257	Lysin motif
O3Y_01590	SM00646	O3Y_01590
O3Y_01595	SM00853	MutL C terminal dimerisation domain
O3Y_01595	SM01340	O3Y_01595
O3Y_01615	SM00244	prohibitin homologues
O3Y_01620	SM00244	prohibitin homologues
O3Y_01635	SM00320	WD40 repeats
O3Y_01675	SM00838	Elongation factor G C-terminus
O3Y_01675	SM00889	Elongation factor G, domain IV
O3Y_01720	SM00382	ATPases associated with a variety of cellular activities
O3Y_01725	SM01005	Alanine racemase, C-terminal domain
O3Y_01795	SM01018	B12 binding domain
O3Y_01825	SM00421	helix_turn_helix, Lux Regulon
O3Y_01835	SM00052	Putative diguanylate phosphodiesterase
O3Y_01835	SM00267	diguanylate cyclase
O3Y_01855	SM00965	Secretin and TonB N terminus short domain
O3Y_01865	SM00028	Tetratricopeptide repeats
O3Y_01870	SM00382	ATPases associated with a variety of cellular activities
O3Y_01940	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_02055	SM00650	Ribosomal RNA adenine dimethylases
O3Y_02075	SM00271	DnaJ molecular chaperone homology domain
O3Y_02080	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_02080	SM01049	O3Y_02080
O3Y_02095	SM00478	endonuclease III
O3Y_02095	SM00525	O3Y_02095
O3Y_02110	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_02125	SM01152	O3Y_02125
O3Y_02145	SM00382	ATPases associated with a variety of cellular activities
O3Y_02155	SM00421	helix_turn_helix, Lux Regulon
O3Y_02160	SM00363	S4 RNA-binding domain
O3Y_02165	SM00732	Likely ribonuclease with RNase H fold.
O3Y_02190	SM00731	SprT homologues.
O3Y_02205	SM00861	Transketolase, pyrimidine binding domain
O3Y_02220	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
O3Y_02265	SM00420	helix_turn_helix, Deoxyribose operon repressor
O3Y_02265	SM01134	O3Y_02265
O3Y_02440	SM00400	zinc finger
O3Y_02440	SM00493	O3Y_02440
O3Y_02440	SM00766	DNA primase DnaG DnaB-binding
O3Y_02465	SM01207	O3Y_02465
O3Y_02475	SM00905	Dihydroneopterin aldolase
O3Y_02520	SM00257	Lysin motif
O3Y_02530	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
O3Y_02530	SM00534	ATPase domain of DNA mismatch repair MUTS family
O3Y_02555	SM00382	ATPases associated with a variety of cellular activities
O3Y_02565	SM00382	ATPases associated with a variety of cellular activities
O3Y_02575	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
O3Y_02605	SM00829	Enoylreductase
O3Y_02630	SM01091	Transporter associated domain
O3Y_02640	SM00382	ATPases associated with a variety of cellular activities
O3Y_02640	SM00962	SRP54-type protein, GTPase domain
O3Y_02640	SM00963	SRP54-type protein, helical bundle domain
O3Y_02665	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
O3Y_02670	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
O3Y_02720	SM00749	bacterial OsmY and nodulation domain
O3Y_02745	SM00382	ATPases associated with a variety of cellular activities
O3Y_02795	SM00487	DEAD-like helicases superfamily
O3Y_02795	SM00490	helicase superfamily c-terminal domain
O3Y_02795	SM00847	Helicase associated domain (HA2)  Add an annotation
O3Y_02820	SM00938	Nitrogen regulatory protein P-II
O3Y_02840	SM00382	ATPases associated with a variety of cellular activities
O3Y_02850	SM01068	Putative carbohydrate binding domain
O3Y_02870	SM00382	ATPases associated with a variety of cellular activities
O3Y_02875	SM00382	ATPases associated with a variety of cellular activities
O3Y_02895	SM00091	PAS domain
O3Y_02895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_02895	SM00387	Histidine kinase-like ATPases
O3Y_02895	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_02895	SM00448	cheY-homologous receiver domain
O3Y_02940	SM00363	S4 RNA-binding domain
O3Y_02960	SM01103	O3Y_02960
O3Y_02970	SM00382	ATPases associated with a variety of cellular activities
O3Y_02995	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_02995	SM00322	K homology RNA-binding domain
O3Y_03015	SM01387	O3Y_03015
O3Y_03020	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_03020	SM00322	K homology RNA-binding domain
O3Y_03025	SM00028	Tetratricopeptide repeats
O3Y_03030	SM00347	helix_turn_helix multiple antibiotic resistance protein
O3Y_03050	SM00052	Putative diguanylate phosphodiesterase
O3Y_03050	SM00091	PAS domain
O3Y_03050	SM00267	diguanylate cyclase
O3Y_03075	SM00052	Putative diguanylate phosphodiesterase
O3Y_03075	SM00267	diguanylate cyclase
O3Y_03085	SM00487	DEAD-like helicases superfamily
O3Y_03085	SM00490	helicase superfamily c-terminal domain
O3Y_03100	SM00937	O3Y_03100
O3Y_03110	SM00382	ATPases associated with a variety of cellular activities
O3Y_03125	SM00927	DNA mismatch repair enzyme MutH
O3Y_03140	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
O3Y_03170	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
O3Y_03185	SM00904	Riboflavin kinase
O3Y_03240	SM00448	cheY-homologous receiver domain
O3Y_03240	SM00850	LytTr DNA-binding domain
O3Y_03255	SM00830	Chorismate mutase type II
O3Y_03265	SM00382	ATPases associated with a variety of cellular activities
O3Y_03285	SM00052	Putative diguanylate phosphodiesterase
O3Y_03285	SM00267	diguanylate cyclase
O3Y_03295	SM00830	Chorismate mutase type II
O3Y_03310	SM00363	S4 RNA-binding domain
O3Y_03320	SM00382	ATPases associated with a variety of cellular activities
O3Y_03320	SM01086	C-terminal, D2-small domain, of ClpB protein
O3Y_03350	SM00448	cheY-homologous receiver domain
O3Y_03350	SM00862	Transcriptional regulatory protein, C terminal
O3Y_03355	SM00091	PAS domain
O3Y_03355	SM00387	Histidine kinase-like ATPases
O3Y_03355	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_03390	SM00382	ATPases associated with a variety of cellular activities
O3Y_03430	SM00116	Domain in cystathionine beta-synthase and other proteins.
O3Y_03445	SM01323	O3Y_03445
O3Y_03490	SM00271	DnaJ molecular chaperone homology domain
O3Y_03515	SM00562	O3Y_03515
O3Y_03525	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_03545	SM00564	beta-propeller repeat
O3Y_03550	SM00382	ATPases associated with a variety of cellular activities
O3Y_03570	SM00116	Domain in cystathionine beta-synthase and other proteins.
O3Y_03570	SM01240	O3Y_03570
O3Y_03580	SM00495	Chitin-binding domain type 3
O3Y_03630	SM00382	ATPases associated with a variety of cellular activities
O3Y_03645	SM00849	Metallo-beta-lactamase superfamily
O3Y_03675	SM00448	cheY-homologous receiver domain
O3Y_03680	SM00091	PAS domain
O3Y_03680	SM00387	Histidine kinase-like ATPases
O3Y_03705	SM00764	Citrate lyase ligase C-terminal domain
O3Y_03775	SM00487	DEAD-like helicases superfamily
O3Y_03775	SM00490	helicase superfamily c-terminal domain
O3Y_03785	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_03815	SM00060	Fibronectin type 3 domain
O3Y_03820	SM00247	Beta/gamma crystallins
O3Y_03835	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_03840	SM00862	Transcriptional regulatory protein, C terminal
O3Y_03900	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_03910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_03910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_03935	SM01276	O3Y_03935
O3Y_03990	SM00271	DnaJ molecular chaperone homology domain
O3Y_04035	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_04045	SM01211	O3Y_04045
O3Y_04050	SM01321	O3Y_04050
O3Y_04130	SM00861	Transketolase, pyrimidine binding domain
O3Y_04155	SM00981	O3Y_04155
O3Y_04170	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
O3Y_04170	SM00475	5'-3' exonuclease
O3Y_04180	SM00267	diguanylate cyclase
O3Y_04185	SM00028	Tetratricopeptide repeats
O3Y_04215	SM00382	ATPases associated with a variety of cellular activities
O3Y_04215	SM00930	O3Y_04215
O3Y_04225	SM00354	helix_turn _helix lactose operon repressor
O3Y_04235	SM00642	Alpha-amylase domain
O3Y_04255	SM00226	Low molecular weight phosphatase family
O3Y_04265	SM00984	UDP binding domain
O3Y_04320	SM00710	Parallel beta-helix repeats
O3Y_04385	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_04400	SM00936	Penicillin-binding protein 5, C-terminal domain 
O3Y_04455	SM00116	Domain in cystathionine beta-synthase and other proteins.
O3Y_04455	SM01091	Transporter associated domain
O3Y_04470	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_04505	SM00771	ZipA, C-terminal domain (FtsZ-binding)
O3Y_04510	SM00278	Helix-hairpin-helix DNA-binding motif class 1
O3Y_04510	SM00292	breast cancer carboxy-terminal domain
O3Y_04510	SM00532	Ligase N family
O3Y_04525	SM00422	helix_turn_helix, mercury resistance
O3Y_04535	SM00244	prohibitin homologues
O3Y_04570	SM00862	Transcriptional regulatory protein, C terminal
O3Y_04575	SM00387	Histidine kinase-like ATPases
O3Y_04595	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
O3Y_04595	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
O3Y_04670	SM00479	O3Y_04670
O3Y_04695	SM00478	endonuclease III
O3Y_04695	SM00525	O3Y_04695
O3Y_04705	SM00900	O3Y_04705
O3Y_04730	SM00487	DEAD-like helicases superfamily
O3Y_04730	SM00490	helicase superfamily c-terminal domain
O3Y_04735	SM00382	ATPases associated with a variety of cellular activities
O3Y_04735	SM00448	cheY-homologous receiver domain
O3Y_04750	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_04755	SM00852	Probable molybdopterin binding domain
O3Y_04775	SM00267	diguanylate cyclase
O3Y_04780	SM00116	Domain in cystathionine beta-synthase and other proteins.
O3Y_04830	SM00226	Low molecular weight phosphatase family
O3Y_04875	SM00448	cheY-homologous receiver domain
O3Y_04895	SM00382	ATPases associated with a variety of cellular activities
O3Y_04905	SM00493	O3Y_04905
O3Y_04935	SM00344	helix_turn_helix ASNC type
O3Y_04960	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_04960	SM00267	diguanylate cyclase
O3Y_04970	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
O3Y_04975	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
O3Y_04990	SM00495	Chitin-binding domain type 3
O3Y_04990	SM00636	O3Y_04990
O3Y_05005	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_05030	SM00448	cheY-homologous receiver domain
O3Y_05035	SM00448	cheY-homologous receiver domain
O3Y_05045	SM00387	Histidine kinase-like ATPases
O3Y_05045	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_05050	SM00387	Histidine kinase-like ATPases
O3Y_05055	SM00052	Putative diguanylate phosphodiesterase
O3Y_05055	SM00448	cheY-homologous receiver domain
O3Y_05060	SM00448	cheY-homologous receiver domain
O3Y_05065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_05065	SM00387	Histidine kinase-like ATPases
O3Y_05090	SM00382	ATPases associated with a variety of cellular activities
O3Y_05095	SM00382	ATPases associated with a variety of cellular activities
O3Y_05135	SM00382	ATPases associated with a variety of cellular activities
O3Y_05140	SM00267	diguanylate cyclase
O3Y_05160	SM00382	ATPases associated with a variety of cellular activities
O3Y_05175	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_05175	SM00876	Biotin and Thiamin Synthesis associated domain
O3Y_05265	SM00528	Domain in histone-like proteins of HNS family
O3Y_05325	SM00357	Cold shock protein domain
O3Y_05335	SM00382	ATPases associated with a variety of cellular activities
O3Y_05335	SM01086	C-terminal, D2-small domain, of ClpB protein
O3Y_05390	SM00448	cheY-homologous receiver domain
O3Y_05395	SM00387	Histidine kinase-like ATPases
O3Y_05490	SM00481	DNA polymerase alpha chain like domain
O3Y_05500	SM00363	S4 RNA-binding domain
O3Y_05505	SM00382	ATPases associated with a variety of cellular activities
O3Y_05510	SM00382	ATPases associated with a variety of cellular activities
O3Y_05530	SM00267	diguanylate cyclase
O3Y_05545	SM00919	Malic enzyme, NAD binding domain
O3Y_05545	SM01274	O3Y_05545
O3Y_05570	SM00271	DnaJ molecular chaperone homology domain
O3Y_05570	SM00671	Sel1-like repeats.
O3Y_05600	SM00020	Trypsin-like serine protease
O3Y_05630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
O3Y_05630	SM00866	O3Y_05630
O3Y_05645	SM00841	Elongation factor P, C-terminal
O3Y_05645	SM01185	O3Y_05645
O3Y_05655	SM00052	Putative diguanylate phosphodiesterase
O3Y_05660	SM00486	DNA polymerase type-B family
O3Y_05665	SM00421	helix_turn_helix, Lux Regulon
O3Y_05665	SM00448	cheY-homologous receiver domain
O3Y_05670	SM00278	Helix-hairpin-helix DNA-binding motif class 1
O3Y_05670	SM00465	GIY-YIG type nucleases (URI domain)
O3Y_05680	SM00267	diguanylate cyclase
O3Y_05695	SM00873	B3/4 domain
O3Y_05695	SM00874	tRNA synthetase B5 domain
O3Y_05695	SM00896	Ferredoxin-fold anticodon binding domain
O3Y_05700	SM00411	bacterial (prokaryotic) histone like domain
O3Y_05775	SM00855	Phosphoglycerate mutase family
O3Y_05790	SM00382	ATPases associated with a variety of cellular activities
O3Y_05805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_05805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_05805	SM01049	O3Y_05805
O3Y_05820	SM00852	Probable molybdopterin binding domain
O3Y_05845	SM00434	DNA Topoisomerase IV
O3Y_05850	SM00450	Rhodanese Homology Domain
O3Y_05855	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_05905	SM00849	Metallo-beta-lactamase superfamily
O3Y_05935	SM00387	Histidine kinase-like ATPases
O3Y_05935	SM01049	O3Y_05935
O3Y_05940	SM00421	helix_turn_helix, Lux Regulon
O3Y_05940	SM00448	cheY-homologous receiver domain
O3Y_05945	SM00347	helix_turn_helix multiple antibiotic resistance protein
O3Y_05955	SM00495	Chitin-binding domain type 3
O3Y_05985	SM00354	helix_turn _helix lactose operon repressor
O3Y_06000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_06000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_06005	SM00479	O3Y_06005
O3Y_06010	SM00100	Cyclic nucleotide-monophosphate binding domain
O3Y_06010	SM00116	Domain in cystathionine beta-synthase and other proteins.
O3Y_06040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_06040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_06090	SM00091	PAS domain
O3Y_06090	SM00382	ATPases associated with a variety of cellular activities
O3Y_06110	SM01005	Alanine racemase, C-terminal domain
O3Y_06115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_06115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_06125	SM00387	Histidine kinase-like ATPases
O3Y_06130	SM00448	cheY-homologous receiver domain
O3Y_06145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_06145	SM00387	Histidine kinase-like ATPases
O3Y_06145	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_06150	SM00448	cheY-homologous receiver domain
O3Y_06150	SM00862	Transcriptional regulatory protein, C terminal
O3Y_06175	SM00382	ATPases associated with a variety of cellular activities
O3Y_06210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
O3Y_06210	SM00895	O3Y_06210
O3Y_06275	SM00448	cheY-homologous receiver domain
O3Y_06275	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_06280	SM00073	Histidine Phosphotransfer domain
O3Y_06280	SM00091	PAS domain
O3Y_06280	SM00387	Histidine kinase-like ATPases
O3Y_06280	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_06280	SM00448	cheY-homologous receiver domain
O3Y_06290	SM00267	diguanylate cyclase
O3Y_06295	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
O3Y_06315	SM00382	ATPases associated with a variety of cellular activities
O3Y_06330	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_06355	SM00028	Tetratricopeptide repeats
O3Y_06355	SM00267	diguanylate cyclase
O3Y_06370	SM00267	diguanylate cyclase
O3Y_06380	SM00267	diguanylate cyclase
O3Y_06400	SM00267	diguanylate cyclase
O3Y_06400	SM01079	O3Y_06400
O3Y_06405	SM00479	O3Y_06405
O3Y_06420	SM00382	ATPases associated with a variety of cellular activities
O3Y_06420	SM00487	DEAD-like helicases superfamily
O3Y_06420	SM00490	helicase superfamily c-terminal domain
O3Y_06420	SM00847	Helicase associated domain (HA2)  Add an annotation
O3Y_06465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_06470	SM00448	cheY-homologous receiver domain
O3Y_06480	SM00073	Histidine Phosphotransfer domain
O3Y_06480	SM00260	Two component signalling adaptor domain
O3Y_06480	SM00387	Histidine kinase-like ATPases
O3Y_06480	SM01231	O3Y_06480
O3Y_06485	SM00448	cheY-homologous receiver domain
O3Y_06490	SM00138	Methyltransferase, chemotaxis proteins 
O3Y_06500	SM00448	cheY-homologous receiver domain
O3Y_06505	SM00260	Two component signalling adaptor domain
O3Y_06510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_06515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_06515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_06520	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
O3Y_06520	SM00091	PAS domain
O3Y_06520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_06525	SM00487	DEAD-like helicases superfamily
O3Y_06525	SM00490	helicase superfamily c-terminal domain
O3Y_06550	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_06550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_06630	SM00382	ATPases associated with a variety of cellular activities
O3Y_06660	SM00100	Cyclic nucleotide-monophosphate binding domain
O3Y_06660	SM00419	helix_turn_helix, cAMP Regulatory protein
O3Y_06710	SM00897	FIST N domain
O3Y_06710	SM01204	O3Y_06710
O3Y_06715	SM00387	Histidine kinase-like ATPases
O3Y_06715	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_06715	SM00448	cheY-homologous receiver domain
O3Y_06720	SM00382	ATPases associated with a variety of cellular activities
O3Y_06730	SM00382	ATPases associated with a variety of cellular activities
O3Y_06765	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_06815	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_06830	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_06860	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_06925	SM00382	ATPases associated with a variety of cellular activities
O3Y_06935	SM00981	O3Y_06935
O3Y_07130	SM00507	HNH nucleases
O3Y_07205	SM00482	DNA polymerase A domain
O3Y_07210	SM00493	O3Y_07210
O3Y_07265	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
O3Y_07265	SM00245	tail specific protease
O3Y_07270	SM00945	ProQ/FINO family
O3Y_07280	SM00382	ATPases associated with a variety of cellular activities
O3Y_07300	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_07345	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
O3Y_07380	SM00382	ATPases associated with a variety of cellular activities
O3Y_07385	SM00387	Histidine kinase-like ATPases
O3Y_07385	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_07390	SM00382	ATPases associated with a variety of cellular activities
O3Y_07390	SM00448	cheY-homologous receiver domain
O3Y_07405	SM00382	ATPases associated with a variety of cellular activities
O3Y_07415	SM00852	Probable molybdopterin binding domain
O3Y_07445	SM01144	O3Y_07445
O3Y_07455	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_07540	SM00382	ATPases associated with a variety of cellular activities
O3Y_07545	SM00420	helix_turn_helix, Deoxyribose operon repressor
O3Y_07545	SM01134	O3Y_07545
O3Y_07565	SM00354	helix_turn _helix lactose operon repressor
O3Y_07585	SM00849	Metallo-beta-lactamase superfamily
O3Y_07610	SM00382	ATPases associated with a variety of cellular activities
O3Y_07645	SM01022	O3Y_07645
O3Y_07685	SM00248	ankyrin repeats
O3Y_07690	SM01060	O3Y_07690
O3Y_07715	SM00822	O3Y_07715
O3Y_07720	SM00052	Putative diguanylate phosphodiesterase
O3Y_07725	SM00267	diguanylate cyclase
O3Y_07755	SM00267	diguanylate cyclase
O3Y_07770	SM00260	Two component signalling adaptor domain
O3Y_07770	SM00448	cheY-homologous receiver domain
O3Y_07780	SM00448	cheY-homologous receiver domain
O3Y_07785	SM00387	Histidine kinase-like ATPases
O3Y_07825	SM00028	Tetratricopeptide repeats
O3Y_07825	SM00386	HAT (Half-A-TPR) repeats
O3Y_07915	SM00382	ATPases associated with a variety of cellular activities
O3Y_07940	SM00363	S4 RNA-binding domain
O3Y_07945	SM00487	DEAD-like helicases superfamily
O3Y_07945	SM00490	helicase superfamily c-terminal domain
O3Y_07955	SM00448	cheY-homologous receiver domain
O3Y_07955	SM00862	Transcriptional regulatory protein, C terminal
O3Y_07960	SM00387	Histidine kinase-like ATPases
O3Y_07970	SM00052	Putative diguanylate phosphodiesterase
O3Y_07985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_07985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_08010	SM00020	Trypsin-like serine protease
O3Y_08020	SM00448	cheY-homologous receiver domain
O3Y_08025	SM00052	Putative diguanylate phosphodiesterase
O3Y_08025	SM00421	helix_turn_helix, Lux Regulon
O3Y_08025	SM00448	cheY-homologous receiver domain
O3Y_08030	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_08030	SM00073	Histidine Phosphotransfer domain
O3Y_08030	SM00387	Histidine kinase-like ATPases
O3Y_08030	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_08030	SM00448	cheY-homologous receiver domain
O3Y_08030	SM00918	Ligated ion channel L-glutamate- and glycine-binding site
O3Y_08035	SM00116	Domain in cystathionine beta-synthase and other proteins.
O3Y_08060	SM00382	ATPases associated with a variety of cellular activities
O3Y_08095	SM00382	ATPases associated with a variety of cellular activities
O3Y_08115	SM00155	Phospholipase D. Active site motifs.
O3Y_08160	SM00382	ATPases associated with a variety of cellular activities
O3Y_08180	SM00382	ATPases associated with a variety of cellular activities
O3Y_08185	SM00382	ATPases associated with a variety of cellular activities
O3Y_08200	SM01131	O3Y_08200
O3Y_08310	SM00052	Putative diguanylate phosphodiesterase
O3Y_08310	SM00091	PAS domain
O3Y_08315	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_08325	SM00344	helix_turn_helix ASNC type
O3Y_08355	SM00448	cheY-homologous receiver domain
O3Y_08355	SM00862	Transcriptional regulatory protein, C terminal
O3Y_08365	SM00354	helix_turn _helix lactose operon repressor
O3Y_08400	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
O3Y_08400	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
O3Y_08400	SM00493	O3Y_08400
O3Y_08430	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_08525	SM00487	DEAD-like helicases superfamily
O3Y_08525	SM00490	helicase superfamily c-terminal domain
O3Y_08545	SM00487	DEAD-like helicases superfamily
O3Y_08600	SM01130	O3Y_08600
O3Y_08815	SM00382	ATPases associated with a variety of cellular activities
O3Y_08850	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_08870	SM00387	Histidine kinase-like ATPases
O3Y_08870	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_08870	SM00448	cheY-homologous receiver domain
O3Y_08940	SM00382	ATPases associated with a variety of cellular activities
O3Y_08945	SM00278	Helix-hairpin-helix DNA-binding motif class 1
O3Y_08955	SM00840	O3Y_08955
O3Y_08970	SM00052	Putative diguanylate phosphodiesterase
O3Y_08990	SM00491	O3Y_08990
O3Y_09010	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_09010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_09030	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_09030	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
O3Y_09035	SM00382	ATPases associated with a variety of cellular activities
O3Y_09055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_09075	SM00763	PrkA AAA domain
O3Y_09105	SM00382	ATPases associated with a variety of cellular activities
O3Y_09110	SM00849	Metallo-beta-lactamase superfamily
O3Y_09125	SM00382	ATPases associated with a variety of cellular activities
O3Y_09140	SM00487	DEAD-like helicases superfamily
O3Y_09140	SM00490	helicase superfamily c-terminal domain
O3Y_09140	SM00982	O3Y_09140
O3Y_09140	SM01058	CarD-like/TRCF domain
O3Y_09195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_09195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_09205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
O3Y_09220	SM00843	O3Y_09220
O3Y_09225	SM00344	helix_turn_helix ASNC type
O3Y_09230	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
O3Y_09230	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
O3Y_09255	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
O3Y_09260	SM00028	Tetratricopeptide repeats
O3Y_09270	SM00411	bacterial (prokaryotic) histone like domain
O3Y_09275	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_09285	SM00278	Helix-hairpin-helix DNA-binding motif class 1
O3Y_09295	SM00411	bacterial (prokaryotic) histone like domain
O3Y_09300	SM00382	ATPases associated with a variety of cellular activities
O3Y_09300	SM00464	Found in ATP-dependent protease La (LON)
O3Y_09305	SM00382	ATPases associated with a variety of cellular activities
O3Y_09305	SM00994	ClpX C4-type zinc finger
O3Y_09305	SM01086	C-terminal, D2-small domain, of ClpB protein
O3Y_09320	SM00387	Histidine kinase-like ATPases
O3Y_09320	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_09325	SM00382	ATPases associated with a variety of cellular activities
O3Y_09325	SM00448	cheY-homologous receiver domain
O3Y_09360	SM00052	Putative diguanylate phosphodiesterase
O3Y_09360	SM00267	diguanylate cyclase
O3Y_09375	SM00563	Phosphate acyltransferases
O3Y_09435	SM00495	Chitin-binding domain type 3
O3Y_09435	SM00636	O3Y_09435
O3Y_09485	SM00978	O3Y_09485
O3Y_09495	SM00563	Phosphate acyltransferases
O3Y_09505	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_09505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_09510	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_09525	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
O3Y_09555	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_09560	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_09565	SM01144	O3Y_09565
O3Y_09580	SM00474	3'-5' exonuclease
O3Y_09610	SM00487	DEAD-like helicases superfamily
O3Y_09610	SM00491	O3Y_09610
O3Y_09635	SM00870	O3Y_09635
O3Y_09655	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
O3Y_09685	SM00260	Two component signalling adaptor domain
O3Y_09685	SM00448	cheY-homologous receiver domain
O3Y_09755	SM00825	Beta-ketoacyl synthase
O3Y_09765	SM00822	O3Y_09765
O3Y_09770	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
O3Y_09800	SM00363	S4 RNA-binding domain
O3Y_09810	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_09835	SM00859	Semialdehyde dehydrogenase, NAD binding domain
O3Y_09845	SM00073	Histidine Phosphotransfer domain
O3Y_09870	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
O3Y_09870	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
O3Y_09870	SM00493	O3Y_09870
O3Y_09940	SM00382	ATPases associated with a variety of cellular activities
O3Y_09950	SM00260	Two component signalling adaptor domain
O3Y_09955	SM00260	Two component signalling adaptor domain
O3Y_09965	SM00448	cheY-homologous receiver domain
O3Y_09970	SM00073	Histidine Phosphotransfer domain
O3Y_09970	SM00260	Two component signalling adaptor domain
O3Y_09970	SM00387	Histidine kinase-like ATPases
O3Y_09970	SM01231	O3Y_09970
O3Y_09980	SM00448	cheY-homologous receiver domain
O3Y_09995	SM00382	ATPases associated with a variety of cellular activities
O3Y_09995	SM00962	SRP54-type protein, GTPase domain
O3Y_10005	SM00855	Phosphoglycerate mutase family
O3Y_10020	SM00836	DALR anticodon binding domain
O3Y_10020	SM01016	Arginyl tRNA synthetase N terminal dom
O3Y_10040	SM00899	O3Y_10040
O3Y_10045	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_10055	SM00382	ATPases associated with a variety of cellular activities
O3Y_10065	SM00881	CoA binding domain
O3Y_10080	SM00861	Transketolase, pyrimidine binding domain
O3Y_10170	SM00859	Semialdehyde dehydrogenase, NAD binding domain
O3Y_10180	SM00825	Beta-ketoacyl synthase
O3Y_10220	SM00463	Small MutS-related domain
O3Y_10275	SM00382	ATPases associated with a variety of cellular activities
O3Y_10300	SM00382	ATPases associated with a variety of cellular activities
O3Y_10300	SM00448	cheY-homologous receiver domain
O3Y_10305	SM00091	PAS domain
O3Y_10305	SM00387	Histidine kinase-like ATPases
O3Y_10305	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_10310	SM00382	ATPases associated with a variety of cellular activities
O3Y_10395	SM01130	O3Y_10395
O3Y_10410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_10410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_10425	SM00028	Tetratricopeptide repeats
O3Y_10485	SM00937	O3Y_10485
O3Y_10505	SM01400	O3Y_10505
O3Y_10550	SM00047	Lysozyme subfamily 2
O3Y_10595	SM00138	Methyltransferase, chemotaxis proteins 
O3Y_10600	SM00260	Two component signalling adaptor domain
O3Y_10600	SM00448	cheY-homologous receiver domain
O3Y_10605	SM00858	O3Y_10605
O3Y_10635	SM00823	Phosphopantetheine attachment site
O3Y_10675	SM01081	Putative carbohydrate binding domain
O3Y_10690	SM00463	Small MutS-related domain
O3Y_10695	SM00363	S4 RNA-binding domain
O3Y_10700	SM00267	diguanylate cyclase
O3Y_10745	SM00479	O3Y_10745
O3Y_10760	SM00849	Metallo-beta-lactamase superfamily
O3Y_10765	SM00257	Lysin motif
O3Y_10775	SM00938	Nitrogen regulatory protein P-II
O3Y_10790	SM00977	TilS substrate C-terminal domain
O3Y_10800	SM00481	DNA polymerase alpha chain like domain
O3Y_10830	SM00935	Outer membrane protein (OmpH-like)
O3Y_10840	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
O3Y_10885	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_10940	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
O3Y_10990	SM00267	diguanylate cyclase
O3Y_11030	SM00900	O3Y_11030
O3Y_11080	SM00464	Found in ATP-dependent protease La (LON)
O3Y_11115	SM00925	MltA specific insert domain
O3Y_11200	SM00354	helix_turn _helix lactose operon repressor
O3Y_11205	SM01038	Beta galactosidase small chain
O3Y_11225	SM00838	Elongation factor G C-terminus
O3Y_11225	SM00889	Elongation factor G, domain IV
O3Y_11230	SM00382	ATPases associated with a variety of cellular activities
O3Y_11260	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
O3Y_11265	SM01133	O3Y_11265
O3Y_11300	SM00986	Uracil DNA glycosylase superfamily
O3Y_11300	SM00987	UreE urease accessory protein, C-terminal domain 
O3Y_11305	SM00518	AP endonuclease family 2
O3Y_11345	SM00448	cheY-homologous receiver domain
O3Y_11345	SM00862	Transcriptional regulatory protein, C terminal
O3Y_11350	SM00073	Histidine Phosphotransfer domain
O3Y_11350	SM00091	PAS domain
O3Y_11350	SM00387	Histidine kinase-like ATPases
O3Y_11350	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_11350	SM00448	cheY-homologous receiver domain
O3Y_11355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
O3Y_11355	SM00091	PAS domain
O3Y_11355	SM00267	diguanylate cyclase
O3Y_11360	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_11425	SM00382	ATPases associated with a variety of cellular activities
O3Y_11430	SM00507	HNH nucleases
O3Y_11445	SM00851	MGS-like domain
O3Y_11445	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
O3Y_11450	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
O3Y_11470	SM00957	SecA DEAD-like domain
O3Y_11470	SM00958	SecA preprotein cross-linking domain
O3Y_11485	SM00864	Tubulin/FtsZ family, GTPase domain
O3Y_11485	SM00865	Tubulin/FtsZ family, C-terminal domain
O3Y_11490	SM00842	Cell division protein FtsA
O3Y_11565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
O3Y_11565	SM00895	O3Y_11565
O3Y_11595	SM00644	O3Y_11595
O3Y_11645	SM00434	DNA Topoisomerase IV
O3Y_11650	SM00387	Histidine kinase-like ATPases
O3Y_11650	SM00433	TopoisomeraseII
O3Y_11690	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_11690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_11695	SM00880	O3Y_11695
O3Y_11695	SM01118	O3Y_11695
O3Y_11710	SM00287	Bacterial SH3 domain homologues
O3Y_11720	SM00382	ATPases associated with a variety of cellular activities
O3Y_11730	SM01192	O3Y_11730
O3Y_11730	SM01193	O3Y_11730
O3Y_11750	SM00954	Region found in RelA / SpoT proteins
O3Y_11760	SM00073	Histidine Phosphotransfer domain
O3Y_11760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_11760	SM00387	Histidine kinase-like ATPases
O3Y_11760	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_11760	SM00448	cheY-homologous receiver domain
O3Y_11765	SM00267	diguanylate cyclase
O3Y_11800	SM00358	Double-stranded RNA binding motif
O3Y_11800	SM00535	Ribonuclease III family
O3Y_11920	SM00014	Acid phosphatase homologues
O3Y_11930	SM00917	LeuA allosteric (dimerisation) domain
O3Y_11935	SM01329	O3Y_11935
O3Y_11955	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_12000	SM00487	DEAD-like helicases superfamily
O3Y_12000	SM00490	helicase superfamily c-terminal domain
O3Y_12010	SM00670	Large family of predicted nucleotide-binding domains
O3Y_12040	SM00563	Phosphate acyltransferases
O3Y_12075	SM00382	ATPases associated with a variety of cellular activities
O3Y_12085	SM00116	Domain in cystathionine beta-synthase and other proteins.
O3Y_12105	SM00382	ATPases associated with a variety of cellular activities
O3Y_12135	SM00924	MgtE intracellular N domain
O3Y_12150	SM00382	ATPases associated with a variety of cellular activities
O3Y_12220	SM00382	ATPases associated with a variety of cellular activities
O3Y_12270	SM00487	DEAD-like helicases superfamily
O3Y_12270	SM00490	helicase superfamily c-terminal domain
O3Y_12305	SM00662	RNA polymerases D
O3Y_12310	SM00363	S4 RNA-binding domain
O3Y_12310	SM01390	O3Y_12310
O3Y_12375	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
O3Y_12380	SM01374	O3Y_12380
O3Y_12400	SM00322	K homology RNA-binding domain
O3Y_12415	SM01382	O3Y_12415
O3Y_12415	SM01383	O3Y_12415
O3Y_12435	SM01403	O3Y_12435
O3Y_12440	SM00967	RNA 2'-O ribose methyltransferase substrate binding
O3Y_12445	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_12445	SM00357	Cold shock protein domain
O3Y_12445	SM00955	O3Y_12445
O3Y_12455	SM00671	Sel1-like repeats.
O3Y_12460	SM00788	Adenylosuccinate synthetase
O3Y_12490	SM00382	ATPases associated with a variety of cellular activities
O3Y_12515	SM00100	Cyclic nucleotide-monophosphate binding domain
O3Y_12515	SM00419	helix_turn_helix, cAMP Regulatory protein
O3Y_12520	SM01150	O3Y_12520
O3Y_12545	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_12595	SM00965	Secretin and TonB N terminus short domain
O3Y_12660	SM00859	Semialdehyde dehydrogenase, NAD binding domain
O3Y_12680	SM00971	Serine acetyltransferase, N-terminal
O3Y_12695	SM00450	Rhodanese Homology Domain
O3Y_12725	SM00841	Elongation factor P, C-terminal
O3Y_12725	SM01185	O3Y_12725
O3Y_12745	SM00883	Chaperonin 10 Kd subunit
O3Y_12790	SM00382	ATPases associated with a variety of cellular activities
O3Y_12790	SM01086	C-terminal, D2-small domain, of ClpB protein
O3Y_12805	SM00354	helix_turn _helix lactose operon repressor
O3Y_12810	SM00487	DEAD-like helicases superfamily
O3Y_12810	SM00490	helicase superfamily c-terminal domain
O3Y_12820	SM00919	Malic enzyme, NAD binding domain
O3Y_12820	SM01274	O3Y_12820
O3Y_12875	SM00448	cheY-homologous receiver domain
O3Y_12875	SM00862	Transcriptional regulatory protein, C terminal
O3Y_12880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_12880	SM00387	Histidine kinase-like ATPases
O3Y_12880	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_12900	SM00267	diguanylate cyclase
O3Y_12930	SM00421	helix_turn_helix, Lux Regulon
O3Y_12930	SM00448	cheY-homologous receiver domain
O3Y_12935	SM01091	Transporter associated domain
O3Y_12955	SM00072	Guanylate kinase homologues.
O3Y_12960	SM01409	O3Y_12960
O3Y_12965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_12965	SM00954	Region found in RelA / SpoT proteins
O3Y_12970	SM00487	DEAD-like helicases superfamily
O3Y_12970	SM00490	helicase superfamily c-terminal domain
O3Y_12980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_12980	SM00387	Histidine kinase-like ATPases
O3Y_12980	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_12985	SM00448	cheY-homologous receiver domain
O3Y_12985	SM00862	Transcriptional regulatory protein, C terminal
O3Y_12995	SM00316	Ribosomal protein S1-like RNA-binding domain
O3Y_12995	SM00732	Likely ribonuclease with RNase H fold.
O3Y_13075	SM00382	ATPases associated with a variety of cellular activities
O3Y_13090	SM00363	S4 RNA-binding domain
O3Y_13135	SM01230	O3Y_13135
O3Y_13145	SM00091	PAS domain
O3Y_13145	SM00387	Histidine kinase-like ATPases
O3Y_13145	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_13150	SM00382	ATPases associated with a variety of cellular activities
O3Y_13150	SM00448	cheY-homologous receiver domain
O3Y_13155	SM00052	Putative diguanylate phosphodiesterase
O3Y_13155	SM00267	diguanylate cyclase
O3Y_13215	SM00382	ATPases associated with a variety of cellular activities
O3Y_13255	SM00470	ParB-like nuclease domain
O3Y_13270	SM01228	O3Y_13270
O3Y_13543	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_13543	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_13543	SM01049	O3Y_13543
O3Y_13553	SM00421	helix_turn_helix, Lux Regulon
O3Y_13568	SM00642	Alpha-amylase domain
O3Y_13623	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
O3Y_13623	SM00495	Chitin-binding domain type 3
O3Y_13623	SM00636	O3Y_13623
O3Y_13643	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_13643	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_13663	SM00014	Acid phosphatase homologues
O3Y_13708	SM00245	tail specific protease
O3Y_13723	SM00267	diguanylate cyclase
O3Y_13728	SM00028	Tetratricopeptide repeats
O3Y_13748	SM00422	helix_turn_helix, mercury resistance
O3Y_13758	SM00257	Lysin motif
O3Y_13768	SM00487	DEAD-like helicases superfamily
O3Y_13768	SM00490	helicase superfamily c-terminal domain
O3Y_13798	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_13798	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_13818	SM00382	ATPases associated with a variety of cellular activities
O3Y_13823	SM00267	diguanylate cyclase
O3Y_13853	SM00052	Putative diguanylate phosphodiesterase
O3Y_13853	SM00267	diguanylate cyclase
O3Y_13868	SM00422	helix_turn_helix, mercury resistance
O3Y_13938	SM00450	Rhodanese Homology Domain
O3Y_13943	SM00052	Putative diguanylate phosphodiesterase
O3Y_14018	SM00382	ATPases associated with a variety of cellular activities
O3Y_14018	SM01086	C-terminal, D2-small domain, of ClpB protein
O3Y_14023	SM00382	ATPases associated with a variety of cellular activities
O3Y_14073	SM00382	ATPases associated with a variety of cellular activities
O3Y_14093	SM00354	helix_turn _helix lactose operon repressor
O3Y_14113	SM00100	Cyclic nucleotide-monophosphate binding domain
O3Y_14133	SM00495	Chitin-binding domain type 3
O3Y_14138	SM00091	PAS domain
O3Y_14138	SM00387	Histidine kinase-like ATPases
O3Y_14138	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_14143	SM00382	ATPases associated with a variety of cellular activities
O3Y_14143	SM00448	cheY-homologous receiver domain
O3Y_14243	SM00267	diguanylate cyclase
O3Y_14248	SM00357	Cold shock protein domain
O3Y_14263	SM00028	Tetratricopeptide repeats
O3Y_14268	SM00327	von Willebrand factor (vWF) type A domain
O3Y_14288	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_14288	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_14323	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
O3Y_14323	SM00382	ATPases associated with a variety of cellular activities
O3Y_14333	SM00357	Cold shock protein domain
O3Y_14358	SM00448	cheY-homologous receiver domain
O3Y_14393	SM01240	O3Y_14393
O3Y_14423	SM01321	O3Y_14423
O3Y_14428	SM00487	DEAD-like helicases superfamily
O3Y_14428	SM00490	helicase superfamily c-terminal domain
O3Y_14448	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_14453	SM00387	Histidine kinase-like ATPases
O3Y_14478	SM00267	diguanylate cyclase
O3Y_14488	SM00458	Ricin-type beta-trefoil
O3Y_14493	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_14493	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_14508	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
O3Y_14538	SM00382	ATPases associated with a variety of cellular activities
O3Y_14543	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_14573	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_14573	SM00387	Histidine kinase-like ATPases
O3Y_14573	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_14578	SM00448	cheY-homologous receiver domain
O3Y_14578	SM00862	Transcriptional regulatory protein, C terminal
O3Y_14598	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
O3Y_14608	SM01007	Class II Aldolase and Adducin N-terminal domain
O3Y_14623	SM00420	helix_turn_helix, Deoxyribose operon repressor
O3Y_14623	SM01134	O3Y_14623
O3Y_14638	SM00642	Alpha-amylase domain
O3Y_14663	SM00448	cheY-homologous receiver domain
O3Y_14663	SM00862	Transcriptional regulatory protein, C terminal
O3Y_14668	SM00387	Histidine kinase-like ATPases
O3Y_14668	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_14693	SM00422	helix_turn_helix, mercury resistance
O3Y_14703	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_14713	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_14713	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_14723	SM00936	Penicillin-binding protein 5, C-terminal domain 
O3Y_14738	SM01057	Eukaryotic-type carbonic anhydrase
O3Y_14743	SM01321	O3Y_14743
O3Y_14763	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_14803	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
O3Y_14908	SM00507	HNH nucleases
O3Y_14913	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_15348	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_15858	SM01321	O3Y_15858
O3Y_15973	SM00354	helix_turn _helix lactose operon repressor
O3Y_15988	SM00387	Histidine kinase-like ATPases
O3Y_15988	SM00448	cheY-homologous receiver domain
O3Y_16008	SM00833	Cobalamin synthesis protein cobW C-terminal domain
O3Y_16023	SM00890	Domain of unknown function
O3Y_16028	SM00387	Histidine kinase-like ATPases
O3Y_16028	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_16033	SM00448	cheY-homologous receiver domain
O3Y_16033	SM00862	Transcriptional regulatory protein, C terminal
O3Y_16058	SM00052	Putative diguanylate phosphodiesterase
O3Y_16073	SM00867	YceI-like domain 
O3Y_16078	SM00116	Domain in cystathionine beta-synthase and other proteins.
O3Y_16118	SM00782	PhnA Zinc-Ribbon
O3Y_16148	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_16148	SM00267	diguanylate cyclase
O3Y_16163	SM00267	diguanylate cyclase
O3Y_16178	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
O3Y_16178	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
O3Y_16188	SM00387	Histidine kinase-like ATPases
O3Y_16188	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_16193	SM00448	cheY-homologous receiver domain
O3Y_16193	SM00862	Transcriptional regulatory protein, C terminal
O3Y_16233	SM00881	CoA binding domain
O3Y_16298	SM00382	ATPases associated with a variety of cellular activities
O3Y_16348	SM00345	helix_turn_helix gluconate operon transcriptional repressor
O3Y_16348	SM00866	O3Y_16348
O3Y_16358	SM00382	ATPases associated with a variety of cellular activities
O3Y_16423	SM00852	Probable molybdopterin binding domain
O3Y_16438	SM00450	Rhodanese Homology Domain
O3Y_16458	SM00861	Transketolase, pyrimidine binding domain
O3Y_16543	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
O3Y_16553	SM00450	Rhodanese Homology Domain
O3Y_16563	SM00563	Phosphate acyltransferases
O3Y_16608	SM00354	helix_turn _helix lactose operon repressor
O3Y_16613	SM00640	Glycosyl hydrolases family 32
O3Y_16628	SM00091	PAS domain
O3Y_16628	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_16648	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_16648	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_16678	SM00354	helix_turn _helix lactose operon repressor
O3Y_16683	SM00421	helix_turn_helix, Lux Regulon
O3Y_16683	SM00448	cheY-homologous receiver domain
O3Y_16688	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_16688	SM00387	Histidine kinase-like ATPases
O3Y_16703	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
O3Y_16723	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_16728	SM00421	helix_turn_helix, Lux Regulon
O3Y_16728	SM00448	cheY-homologous receiver domain
O3Y_16733	SM00387	Histidine kinase-like ATPases
O3Y_16753	SM00382	ATPases associated with a variety of cellular activities
O3Y_16773	SM00822	O3Y_16773
O3Y_16798	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
O3Y_16798	SM00267	diguanylate cyclase
O3Y_16808	SM00495	Chitin-binding domain type 3
O3Y_16808	SM00636	O3Y_16808
O3Y_16823	SM00448	cheY-homologous receiver domain
O3Y_16828	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_16828	SM00387	Histidine kinase-like ATPases
O3Y_16828	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_16848	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_16848	SM00387	Histidine kinase-like ATPases
O3Y_16848	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_16848	SM00448	cheY-homologous receiver domain
O3Y_16858	SM00851	MGS-like domain
O3Y_16893	SM00387	Histidine kinase-like ATPases
O3Y_16898	SM00989	O3Y_16898
O3Y_16918	SM00382	ATPases associated with a variety of cellular activities
O3Y_16973	SM00387	Histidine kinase-like ATPases
O3Y_16973	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_16973	SM00448	cheY-homologous receiver domain
O3Y_17083	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_17083	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
O3Y_17088	SM00382	ATPases associated with a variety of cellular activities
O3Y_17093	SM00327	von Willebrand factor (vWF) type A domain
O3Y_17098	SM00382	ATPases associated with a variety of cellular activities
O3Y_17123	SM00487	DEAD-like helicases superfamily
O3Y_17123	SM00490	helicase superfamily c-terminal domain
O3Y_17143	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_17143	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_17158	SM00796	Allophanate hydrolase subunit 1
O3Y_17163	SM00797	Allophanate hydrolase subunit 2
O3Y_17173	SM00984	UDP binding domain
O3Y_17183	SM00382	ATPases associated with a variety of cellular activities
O3Y_17198	SM00052	Putative diguanylate phosphodiesterase
O3Y_17198	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
O3Y_17198	SM00267	diguanylate cyclase
O3Y_17213	SM00271	DnaJ molecular chaperone homology domain
O3Y_17248	SM00857	Resolvase, N terminal domain
O3Y_17283	SM00020	Trypsin-like serine protease
O3Y_17288	SM00487	DEAD-like helicases superfamily
O3Y_17288	SM00490	helicase superfamily c-terminal domain
O3Y_17293	SM00357	Cold shock protein domain
O3Y_17293	SM00955	O3Y_17293
O3Y_17348	SM00924	MgtE intracellular N domain
O3Y_17353	SM00883	Chaperonin 10 Kd subunit
O3Y_17428	SM01266	O3Y_17428
O3Y_17433	SM01091	Transporter associated domain
O3Y_17448	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
O3Y_17468	SM00267	diguanylate cyclase
O3Y_17478	SM00448	cheY-homologous receiver domain
O3Y_17478	SM00850	LytTr DNA-binding domain
O3Y_17483	SM00387	Histidine kinase-like ATPases
O3Y_17503	SM00382	ATPases associated with a variety of cellular activities
O3Y_17523	SM00642	Alpha-amylase domain
O3Y_17548	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
O3Y_17548	SM00091	PAS domain
O3Y_17548	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_17568	SM00345	helix_turn_helix gluconate operon transcriptional repressor
O3Y_17638	SM00829	Enoylreductase
O3Y_17658	SM00421	helix_turn_helix, Lux Regulon
O3Y_17688	SM00481	DNA polymerase alpha chain like domain
O3Y_17693	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_17708	SM01350	O3Y_17708
O3Y_17718	SM00849	Metallo-beta-lactamase superfamily
O3Y_17748	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_17748	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_17763	SM00729	Elongator protein 3, MiaB family, Radical SAM
O3Y_17793	SM00382	ATPases associated with a variety of cellular activities
O3Y_17823	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_17823	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_17838	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_17863	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
O3Y_17868	SM00357	Cold shock protein domain
O3Y_17883	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_17893	SM00091	PAS domain
O3Y_17893	SM00267	diguanylate cyclase
O3Y_17898	SM00420	helix_turn_helix, Deoxyribose operon repressor
O3Y_17898	SM01134	O3Y_17898
O3Y_17928	SM00382	ATPases associated with a variety of cellular activities
O3Y_17943	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
O3Y_17953	SM00421	helix_turn_helix, Lux Regulon
O3Y_17963	SM00260	Two component signalling adaptor domain
O3Y_17963	SM00448	cheY-homologous receiver domain
O3Y_17968	SM00347	helix_turn_helix multiple antibiotic resistance protein
O3Y_17973	SM00267	diguanylate cyclase
O3Y_17983	SM00530	Helix-turn-helix XRE-family like proteins 
O3Y_17988	SM00267	diguanylate cyclase
O3Y_17988	SM01079	O3Y_17988
O3Y_18013	SM00267	diguanylate cyclase
O3Y_18048	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18048	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_18063	SM00382	ATPases associated with a variety of cellular activities
O3Y_18068	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_18073	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18118	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18128	SM00487	DEAD-like helicases superfamily
O3Y_18128	SM00490	helicase superfamily c-terminal domain
O3Y_18158	SM00382	ATPases associated with a variety of cellular activities
O3Y_18183	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_18203	SM00347	helix_turn_helix multiple antibiotic resistance protein
O3Y_18253	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_18253	SM01009	AlkA N-terminal domain
O3Y_18273	SM01154	O3Y_18273
O3Y_18288	SM00671	Sel1-like repeats.
O3Y_18303	SM00642	Alpha-amylase domain
O3Y_18313	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18313	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_18328	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18328	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_18343	SM00382	ATPases associated with a variety of cellular activities
O3Y_18353	SM00062	Bacterial periplasmic substrate-binding proteins
O3Y_18398	SM00849	Metallo-beta-lactamase superfamily
O3Y_18418	SM00450	Rhodanese Homology Domain
O3Y_18433	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18433	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_18478	SM00344	helix_turn_helix ASNC type
O3Y_18483	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18483	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_18508	SM00342	helix_turn_helix, arabinose operon control protein
O3Y_18523	SM00421	helix_turn_helix, Lux Regulon
O3Y_18543	SM00052	Putative diguanylate phosphodiesterase
O3Y_18543	SM00267	diguanylate cyclase
O3Y_18548	SM00382	ATPases associated with a variety of cellular activities
O3Y_18558	SM00331	Sigma factor PP2C-like phosphatases
O3Y_18558	SM00448	cheY-homologous receiver domain
O3Y_18568	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18573	SM00448	cheY-homologous receiver domain
O3Y_18583	SM00138	Methyltransferase, chemotaxis proteins 
O3Y_18588	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
O3Y_18588	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
O3Y_18593	SM00260	Two component signalling adaptor domain
O3Y_18598	SM00260	Two component signalling adaptor domain
O3Y_18603	SM00073	Histidine Phosphotransfer domain
O3Y_18603	SM00260	Two component signalling adaptor domain
O3Y_18603	SM00387	Histidine kinase-like ATPases
O3Y_18603	SM01231	O3Y_18603
O3Y_18608	SM00448	cheY-homologous receiver domain
O3Y_18633	SM00382	ATPases associated with a variety of cellular activities
O3Y_18643	SM00387	Histidine kinase-like ATPases
O3Y_18643	SM00388	His Kinase A (phosphoacceptor) domain
O3Y_18648	SM00448	cheY-homologous receiver domain
O3Y_18648	SM00862	Transcriptional regulatory protein, C terminal
O3Y_18658	SM00822	O3Y_18658
O3Y_18663	SM01236	O3Y_18663
O3Y_18688	SM00470	ParB-like nuclease domain
