locus-tag class description HPY16_00005 PF08299 Bacterial dnaA protein helix-turn-helix HPY16_00005 PF00308 Bacterial dnaA protein HPY16_00005 PF11638 DnaA N-terminal domain HPY16_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HPY16_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HPY16_00010 PF02767 DNA polymerase III beta subunit, central domain HPY16_00015 PF02463 RecF/RecN/SMC N terminal domain HPY16_00020 PF18053 DNA gyrase B subunit insert domain HPY16_00020 PF00204 DNA gyrase B HPY16_00020 PF01751 Toprim domain HPY16_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HPY16_00030 PF00011 Hsp20/alpha crystallin family HPY16_00035 PF00155 Aminotransferase class I and II HPY16_00040 PF05746 DALR anticodon binding domain HPY16_00040 PF02092 Glycyl-tRNA synthetase beta subunit HPY16_00045 PF02091 Glycyl-tRNA synthetase alpha subunit HPY16_00050 PF01169 Uncharacterized protein family UPF0016 HPY16_00060 PF01206 Sulfurtransferase TusA HPY16_00070 PF08240 Alcohol dehydrogenase GroES-like domain HPY16_00070 PF00107 Zinc-binding dehydrogenase HPY16_00075 PF00291 Pyridoxal-phosphate dependent enzyme HPY16_00075 PF00585 C-terminal regulatory domain of Threonine dehydratase HPY16_00080 PF00920 Dehydratase family HPY16_00085 PF01063 Amino-transferase class IV HPY16_00095 PF00205 Thiamine pyrophosphate enzyme, central domain HPY16_00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY16_00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY16_00100 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPY16_00100 PF01078 Magnesium chelatase, subunit ChlI HPY16_00105 PF01553 Acyltransferase HPY16_00110 PF01323 DSBA-like thioredoxin domain HPY16_00115 PF01636 Phosphotransferase enzyme family HPY16_00120 PF13746 4Fe-4S dicluster domain HPY16_00120 PF12801 4Fe-4S binding domain HPY16_00120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HPY16_00125 PF06288 Protein of unknown function (DUF1040) HPY16_00130 PF07070 SpoOM protein HPY16_00135 PF03006 Haemolysin-III related HPY16_00145 PF02386 Cation transport protein HPY16_00150 PF02080 TrkA-C domain HPY16_00150 PF02254 TrkA-N domain HPY16_00155 PF01029 NusB family HPY16_00155 PF01189 16S rRNA methyltransferase RsmB/F HPY16_00160 PF00551 Formyl transferase HPY16_00160 PF02911 Formyl transferase, C-terminal domain HPY16_00165 PF01327 Polypeptide deformylase HPY16_00170 PF01476 LysM domain HPY16_00175 PF17782 DprA winged helix domain HPY16_00175 PF02481 DNA recombination-mediator protein A HPY16_00180 PF04361 Protein of unknown function (DUF494) HPY16_00185 PF01396 Topoisomerase DNA binding C4 zinc finger HPY16_00190 PF02222 ATP-grasp domain HPY16_00190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HPY16_00195 PF00731 AIR carboxylase HPY16_00200 PF01300 Telomere recombination HPY16_00205 PF01218 Coproporphyrinogen III oxidase HPY16_00210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HPY16_00210 PF08501 Shikimate dehydrogenase substrate binding domain HPY16_00210 PF01488 Shikimate / quinate 5-dehydrogenase HPY16_00220 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_00260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HPY16_00265 PF13667 ThiC-associated domain HPY16_00265 PF01964 Radical SAM ThiC family HPY16_00270 PF02581 Thiamine monophosphate synthase HPY16_00275 PF00899 ThiF family HPY16_00280 PF02597 ThiS family HPY16_00285 PF05690 Thiazole biosynthesis protein ThiG HPY16_00290 PF06968 Biotin and Thiamin Synthesis associated domain HPY16_00290 PF04055 Radical SAM superfamily HPY16_00295 PF01321 Creatinase/Prolidase N-terminal domain HPY16_00295 PF00557 Metallopeptidase family M24 HPY16_00295 PF00557 Metallopeptidase family M24 HPY16_00295 PF01321 Creatinase/Prolidase N-terminal domain HPY16_00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_00300 PF03466 LysR substrate binding domain HPY16_00305 PF07690 Major Facilitator Superfamily HPY16_00315 PF01037 Lrp/AsnC ligand binding domain HPY16_00320 PF00990 Diguanylate cyclase, GGDEF domain HPY16_00320 PF08448 PAS fold HPY16_00320 PF00563 EAL domain HPY16_00325 PF04445 Putative SAM-dependent methyltransferase HPY16_00335 PF00892 EamA-like transporter family HPY16_00340 PF00582 Universal stress protein family HPY16_00345 PF00210 Ferritin-like domain HPY16_00350 PF10625 Universal stress protein B (UspB) HPY16_00365 PF02646 RmuC family HPY16_00370 PF01209 ubiE/COQ5 methyltransferase family HPY16_00375 PF02036 SCP-2 sterol transfer family HPY16_00380 PF03109 ABC1 family HPY16_00385 PF02416 mttA/Hcf106 family HPY16_00390 PF02416 mttA/Hcf106 family HPY16_00395 PF00902 Sec-independent protein translocase protein (TatC) HPY16_00400 PF00034 Cytochrome c HPY16_00400 PF03150 Di-haem cytochrome c peroxidase HPY16_00405 PF01554 MatE HPY16_00420 PF01553 Acyltransferase HPY16_00425 PF01040 UbiA prenyltransferase family HPY16_00430 PF04345 Chorismate lyase HPY16_00435 PF03748 Flagellar basal body-associated protein FliL HPY16_00440 PF08447 PAS fold HPY16_00440 PF13426 PAS domain HPY16_00440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_00445 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HPY16_00445 PF01694 Rhomboid family HPY16_00450 PF00581 Rhodanese-like domain HPY16_00455 PF01026 TatD related DNase HPY16_00460 PF00490 Delta-aminolevulinic acid dehydratase HPY16_00470 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY16_00470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY16_00470 PF00476 DNA polymerase family A HPY16_00470 PF01612 3'-5' exonuclease HPY16_00475 PF01926 50S ribosome-binding GTPase HPY16_00480 PF00034 Cytochrome c HPY16_00490 PF04220 Der GTPase activator (YihI) HPY16_00495 PF10675 Protein of unknown function (DUF2489) HPY16_00500 PF06969 HemN C-terminal domain HPY16_00500 PF04055 Radical SAM superfamily HPY16_00510 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HPY16_00515 PF02602 Uroporphyrinogen-III synthase HemD HPY16_00520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HPY16_00520 PF03900 Porphobilinogen deaminase, C-terminal domain HPY16_00525 PF12633 Adenylate cyclase NT domain HPY16_00525 PF01295 Adenylate cyclase, class-I HPY16_00530 PF01491 Frataxin-like domain HPY16_00540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPY16_00540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY16_00545 PF01678 Diaminopimelate epimerase HPY16_00550 PF04340 Protein of unknown function, DUF484 HPY16_00555 PF02899 Phage integrase, N-terminal SAM-like domain HPY16_00555 PF00589 Phage integrase family HPY16_00560 PF13419 Haloacid dehalogenase-like hydrolase HPY16_00565 PF10442 FIST C domain HPY16_00565 PF08495 FIST N domain HPY16_00565 PF00563 EAL domain HPY16_00565 PF00990 Diguanylate cyclase, GGDEF domain HPY16_00585 PF12146 Serine aminopeptidase, S33 HPY16_00590 PF01810 LysE type translocator HPY16_00595 PF08668 HDOD domain HPY16_00595 PF00563 EAL domain HPY16_00600 PF00210 Ferritin-like domain HPY16_00635 PF02881 SRP54-type protein, helical bundle domain HPY16_00635 PF00448 SRP54-type protein, GTPase domain HPY16_00640 PF00005 ABC transporter HPY16_00645 PF18075 FtsX extracellular domain HPY16_00650 PF04545 Sigma-70, region 4 HPY16_00650 PF04542 Sigma-70 region 2 HPY16_00650 PF00140 Sigma-70 factor, region 1.2 HPY16_00655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY16_00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_00660 PF00440 Bacterial regulatory proteins, tetR family HPY16_00670 PF05958 tRNA (Uracil-5-)-methyltransferase HPY16_00675 PF00593 TonB dependent receptor HPY16_00675 PF07715 TonB-dependent Receptor Plug Domain HPY16_00680 PF05922 Peptidase inhibitor I9 HPY16_00680 PF00082 Subtilase family HPY16_00680 PF04151 Bacterial pre-peptidase C-terminal domain HPY16_00685 PF01177 Asp/Glu/Hydantoin racemase HPY16_00750 PF00962 Adenosine/AMP deaminase HPY16_00755 PF13188 PAS domain HPY16_00755 PF00563 EAL domain HPY16_00755 PF00990 Diguanylate cyclase, GGDEF domain HPY16_00755 PF03707 Bacterial signalling protein N terminal repeat HPY16_00760 PF02954 Bacterial regulatory protein, Fis family HPY16_00760 PF00072 Response regulator receiver domain HPY16_00760 PF00158 Sigma-54 interaction domain HPY16_00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_00765 PF00512 His Kinase A (phospho-acceptor) domain HPY16_00765 PF00989 PAS fold HPY16_00775 PF00120 Glutamine synthetase, catalytic domain HPY16_00775 PF03951 Glutamine synthetase, beta-Grasp domain HPY16_00795 PF03631 Virulence factor BrkB HPY16_00800 PF02580 D-Tyr-tRNA(Tyr) deacylase HPY16_00805 PF09500 Putative thioesterase (yiiD_Cterm) HPY16_00805 PF00583 Acetyltransferase (GNAT) family HPY16_00815 PF01293 Phosphoenolpyruvate carboxykinase HPY16_00820 PF01430 Hsp33 protein HPY16_00825 PF01479 S4 domain HPY16_00830 PF11356 Type II secretion system protein C HPY16_00835 PF03958 Bacterial type II/III secretion system short domain HPY16_00835 PF00263 Bacterial type II and III secretion system protein HPY16_00840 PF00437 Type II/IV secretion system protein HPY16_00845 PF00482 Type II secretion system (T2SS), protein F HPY16_00850 PF08334 Type II secretion system (T2SS), protein G HPY16_00850 PF07963 Prokaryotic N-terminal methylation motif HPY16_00855 PF12019 Type II transport protein GspH HPY16_00860 PF02501 Type II secretion system (T2SS), protein I HPY16_00860 PF07963 Prokaryotic N-terminal methylation motif HPY16_00865 PF07963 Prokaryotic N-terminal methylation motif HPY16_00865 PF11612 Type II secretion system (T2SS), protein J HPY16_00870 PF03934 Type II secretion system (T2SS), protein K HPY16_00875 PF05134 Type II secretion system (T2SS), protein L HPY16_00875 PF12693 GspL periplasmic domain HPY16_00880 PF04612 Type II secretion system (T2SS), protein M HPY16_00885 PF01203 Type II secretion system (T2SS), protein N HPY16_00890 PF00459 Inositol monophosphatase family HPY16_00895 PF00293 NUDIX domain HPY16_00900 PF01106 NifU-like domain HPY16_00900 PF01521 Iron-sulphur cluster biosynthesis HPY16_00905 PF00156 Phosphoribosyl transferase domain HPY16_00915 PF00561 alpha/beta hydrolase fold HPY16_00925 PF00575 S1 RNA binding domain HPY16_00925 PF17674 HHH domain HPY16_00925 PF16921 Tex protein YqgF-like domain HPY16_00925 PF09371 Tex-like protein N-terminal domain HPY16_00930 PF03449 Transcription elongation factor, N-terminal HPY16_00930 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY16_00935 PF00072 Response regulator receiver domain HPY16_00935 PF00486 Transcriptional regulatory protein, C terminal HPY16_00940 PF00512 His Kinase A (phospho-acceptor) domain HPY16_00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_00940 PF00672 HAMP domain HPY16_00945 PF00860 Permease family HPY16_00950 PF00271 Helicase conserved C-terminal domain HPY16_00950 PF00270 DEAD/DEAH box helicase HPY16_00950 PF17191 RecG wedge domain HPY16_00955 PF02824 TGS domain HPY16_00955 PF04607 Region found in RelA / SpoT proteins HPY16_00955 PF13291 ACT domain HPY16_00960 PF01192 RNA polymerase Rpb6 HPY16_00965 PF00625 Guanylate kinase HPY16_00970 PF02592 Putative vitamin uptake transporter HPY16_00975 PF00474 Sodium:solute symporter family HPY16_00985 PF03471 Transporter associated domain HPY16_00985 PF00999 Sodium/hydrogen exchanger family HPY16_00985 PF02080 TrkA-C domain HPY16_00990 PF00072 Response regulator receiver domain HPY16_00990 PF00196 Bacterial regulatory proteins, luxR family HPY16_00995 PF11412 Disulphide bond corrector protein DsbC HPY16_00995 PF02683 Cytochrome C biogenesis protein transmembrane region HPY16_01000 PF01609 Transposase DDE domain HPY16_01000 PF02281 Transposase Tn5 dimerisation domain HPY16_01000 PF14706 Transposase DNA-binding HPY16_01005 PF11852 Domain of unknown function (DUF3372) HPY16_01005 PF03714 Bacterial pullanase-associated domain HPY16_01005 PF18494 Pullulanase Ins domain HPY16_01005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY16_01005 PF17967 Pullulanase N2 domain HPY16_01010 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY16_01015 PF00206 Lyase HPY16_01015 PF10415 Fumarase C C-terminus HPY16_01020 PF00990 Diguanylate cyclase, GGDEF domain HPY16_01020 PF17158 Membrane-associated sensor, integral membrane domain HPY16_01025 PF04186 FxsA cytoplasmic membrane protein HPY16_01030 PF00588 SpoU rRNA Methylase family HPY16_01035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY16_01035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY16_01040 PF16527 Two-component sensor protein CpxA, periplasmic domain HPY16_01040 PF00672 HAMP domain HPY16_01040 PF00512 His Kinase A (phospho-acceptor) domain HPY16_01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_01045 PF00486 Transcriptional regulatory protein, C terminal HPY16_01045 PF00072 Response regulator receiver domain HPY16_01055 PF16916 Dimerisation domain of Zinc Transporter HPY16_01055 PF01545 Cation efflux family HPY16_01060 PF00365 Phosphofructokinase HPY16_01065 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HPY16_01070 PF06005 Cell division protein ZapB HPY16_01075 PF02219 Methylenetetrahydrofolate reductase HPY16_01080 PF00696 Amino acid kinase family HPY16_01080 PF00742 Homoserine dehydrogenase HPY16_01080 PF03447 Homoserine dehydrogenase, NAD binding domain HPY16_01085 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY16_01090 PF01340 Met Apo-repressor, MetJ HPY16_01095 PF00390 Malic enzyme, N-terminal domain HPY16_01095 PF03949 Malic enzyme, NAD binding domain HPY16_01100 PF01197 Ribosomal protein L31 HPY16_01105 PF00270 DEAD/DEAH box helicase HPY16_01105 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPY16_01105 PF18074 Primosomal protein N C-terminal domain HPY16_01105 PF00271 Helicase conserved C-terminal domain HPY16_01105 PF17764 3′ DNA-binding domain (3′BD) HPY16_01110 PF00356 Bacterial regulatory proteins, lacI family HPY16_01115 PF05036 Sporulation related domain HPY16_01120 PF00227 Proteasome subunit HPY16_01125 PF00004 ATPase family associated with various cellular activities (AAA) HPY16_01125 PF10431 C-terminal, D2-small domain, of ClpB protein HPY16_01125 PF07724 AAA domain (Cdc48 subfamily) HPY16_01130 PF01040 UbiA prenyltransferase family HPY16_01135 PF03737 Aldolase/RraA HPY16_01140 PF01554 MatE HPY16_01145 PF00121 Triosephosphate isomerase HPY16_01165 PF00455 DeoR C terminal sensor domain HPY16_01165 PF08220 DeoR-like helix-turn-helix domain HPY16_01170 PF00166 Chaperonin 10 Kd subunit HPY16_01175 PF00118 TCP-1/cpn60 chaperonin family HPY16_01185 PF04055 Radical SAM superfamily HPY16_01190 PF01132 Elongation factor P (EF-P) OB domain HPY16_01190 PF08207 Elongation factor P (EF-P) KOW-like domain HPY16_01190 PF09285 Elongation factor P, C-terminal HPY16_01195 PF02313 Fumarate reductase subunit D HPY16_01200 PF02300 Fumarate reductase subunit C HPY16_01205 PF13183 4Fe-4S dicluster domain HPY16_01205 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY16_01210 PF02910 Fumarate reductase flavoprotein C-term HPY16_01210 PF00890 FAD binding domain HPY16_01215 PF00152 tRNA synthetases class II (D, K and N) HPY16_01220 PF00581 Rhodanese-like domain HPY16_01225 PF02556 Preprotein translocase subunit SecB HPY16_01230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPY16_01230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPY16_01235 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_01235 PF06426 Serine acetyltransferase, N-terminal HPY16_01245 PF00311 Phosphoenolpyruvate carboxylase HPY16_01250 PF01546 Peptidase family M20/M25/M40 HPY16_01250 PF07687 Peptidase dimerisation domain HPY16_01255 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY16_01255 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY16_01260 PF00696 Amino acid kinase family HPY16_01265 PF00764 Arginosuccinate synthase HPY16_01270 PF00206 Lyase HPY16_01270 PF14698 Argininosuccinate lyase C-terminal HPY16_01280 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_01280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY16_01285 PF00462 Glutaredoxin HPY16_01285 PF08534 Redoxin HPY16_01290 PF03466 LysR substrate binding domain HPY16_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_01295 PF00912 Transglycosylase HPY16_01295 PF17092 Penicillin-binding protein OB-like domain HPY16_01295 PF00905 Penicillin binding protein transpeptidase domain HPY16_01320 PF11741 AMIN domain HPY16_01320 PF00263 Bacterial type II and III secretion system protein HPY16_01320 PF03958 Bacterial type II/III secretion system short domain HPY16_01320 PF07660 Secretin and TonB N terminus short domain HPY16_01325 PF01202 Shikimate kinase HPY16_01330 PF01761 3-dehydroquinate synthase HPY16_01340 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPY16_01345 PF00834 Ribulose-phosphate 3 epimerase family HPY16_01350 PF13419 Haloacid dehalogenase-like hydrolase HPY16_01355 PF00579 tRNA synthetases class I (W and Y) HPY16_01370 PF04055 Radical SAM superfamily HPY16_01370 PF00919 Uncharacterized protein family UPF0004 HPY16_01370 PF18693 TRAM domain HPY16_01375 PF00117 Glutamine amidotransferase class-I HPY16_01380 PF00202 Aminotransferase class-III HPY16_01385 PF04958 Arginine N-succinyltransferase beta subunit HPY16_01390 PF00171 Aldehyde dehydrogenase family HPY16_01400 PF13545 Crp-like helix-turn-helix domain HPY16_01400 PF00027 Cyclic nucleotide-binding domain HPY16_01405 PF00485 Phosphoribulokinase / Uridine kinase family HPY16_01410 PF06794 Uncharacterised protein family (UPF0270) HPY16_01415 PF00561 alpha/beta hydrolase fold HPY16_01425 PF12848 ABC transporter HPY16_01425 PF00005 ABC transporter HPY16_01430 PF02525 Flavodoxin-like fold HPY16_01435 PF00999 Sodium/hydrogen exchanger family HPY16_01435 PF02254 TrkA-N domain HPY16_01445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY16_01450 PF01112 Asparaginase HPY16_01455 PF00709 Adenylosuccinate synthetase HPY16_01460 PF08238 Sel1 repeat HPY16_01465 PF00884 Sulfatase HPY16_01465 PF11893 Domain of unknown function (DUF3413) HPY16_01470 PF08461 Ribonuclease R winged-helix domain HPY16_01470 PF17876 Cold shock domain HPY16_01470 PF08206 Ribonuclease B OB domain HPY16_01470 PF00575 S1 RNA binding domain HPY16_01470 PF00773 RNB domain HPY16_01475 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY16_01475 PF00588 SpoU rRNA Methylase family HPY16_01480 PF00338 Ribosomal protein S10p/S20e HPY16_01485 PF00297 Ribosomal protein L3 HPY16_01490 PF00573 Ribosomal protein L4/L1 family HPY16_01495 PF00276 Ribosomal protein L23 HPY16_01500 PF03947 Ribosomal Proteins L2, C-terminal domain HPY16_01500 PF00181 Ribosomal Proteins L2, RNA binding domain HPY16_01505 PF00203 Ribosomal protein S19 HPY16_01510 PF00237 Ribosomal protein L22p/L17e HPY16_01515 PF00189 Ribosomal protein S3, C-terminal domain HPY16_01515 PF07650 KH domain HPY16_01520 PF00252 Ribosomal protein L16p/L10e HPY16_01525 PF00831 Ribosomal L29 protein HPY16_01530 PF00366 Ribosomal protein S17 HPY16_01535 PF00238 Ribosomal protein L14p/L23e HPY16_01540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPY16_01540 PF00467 KOW motif HPY16_01545 PF00673 ribosomal L5P family C-terminus HPY16_01545 PF00281 Ribosomal protein L5 HPY16_01550 PF00253 Ribosomal protein S14p/S29e HPY16_01555 PF00410 Ribosomal protein S8 HPY16_01560 PF00347 Ribosomal protein L6 HPY16_01565 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPY16_01570 PF03719 Ribosomal protein S5, C-terminal domain HPY16_01570 PF00333 Ribosomal protein S5, N-terminal domain HPY16_01575 PF00327 Ribosomal protein L30p/L7e HPY16_01580 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPY16_01585 PF00344 SecY translocase HPY16_01590 PF00444 Ribosomal protein L36 HPY16_01595 PF00416 Ribosomal protein S13/S18 HPY16_01600 PF00411 Ribosomal protein S11 HPY16_01605 PF00163 Ribosomal protein S4/S9 N-terminal domain HPY16_01605 PF01479 S4 domain HPY16_01610 PF01000 RNA polymerase Rpb3/RpoA insert domain HPY16_01610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPY16_01610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPY16_01615 PF01196 Ribosomal protein L17 HPY16_01625 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY16_01625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY16_01630 PF04225 Opacity-associated protein A LysM-like domain HPY16_01630 PF08525 Opacity-associated protein A N-terminal motif HPY16_01635 PF00892 EamA-like transporter family HPY16_01640 PF13673 Acetyltransferase (GNAT) domain HPY16_01645 PF03880 DbpA RNA binding domain HPY16_01645 PF00271 Helicase conserved C-terminal domain HPY16_01645 PF00270 DEAD/DEAH box helicase HPY16_01655 PF02872 5'-nucleotidase, C-terminal domain HPY16_01655 PF00149 Calcineurin-like phosphoesterase HPY16_01660 PF10414 Sirohaem synthase dimerisation region HPY16_01660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY16_01660 PF14824 Sirohaem biosynthesis protein central HPY16_01665 PF01507 Phosphoadenosine phosphosulfate reductase family HPY16_01670 PF00009 Elongation factor Tu GTP binding domain HPY16_01695 PF00005 ABC transporter HPY16_01705 PF10795 Protein of unknown function (DUF2607) HPY16_01710 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HPY16_01715 PF01625 Peptide methionine sulfoxide reductase HPY16_01720 PF17243 POTRA domain TamA domain 1 HPY16_01720 PF01103 Surface antigen HPY16_01720 PF07244 Surface antigen variable number repeat HPY16_01725 PF04357 TamB, inner membrane protein subunit of TAM complex HPY16_01730 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HPY16_01735 PF00719 Inorganic pyrophosphatase HPY16_01740 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HPY16_01745 PF02875 Mur ligase family, glutamate ligase domain HPY16_01745 PF08245 Mur ligase middle domain HPY16_01745 PF01225 Mur ligase family, catalytic domain HPY16_01750 PF02441 Flavoprotein HPY16_01760 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_01765 PF00005 ABC transporter HPY16_01770 PF04751 Protein of unknown function (DUF615) HPY16_01775 PF01523 Putative modulator of DNA gyrase HPY16_01780 PF00571 CBS domain HPY16_01780 PF01769 Divalent cation transporter HPY16_01780 PF03448 MgtE intracellular N domain HPY16_01785 PF00381 PTS HPr component phosphorylation site HPY16_01790 PF03668 P-loop ATPase protein family HPY16_01795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY16_01800 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY16_01805 PF04963 Sigma-54 factor, core binding domain HPY16_01805 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPY16_01805 PF04552 Sigma-54, DNA binding domain HPY16_01810 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPY16_01810 PF00005 ABC transporter HPY16_01815 PF03968 OstA-like protein HPY16_01830 PF01380 SIS domain HPY16_01830 PF00571 CBS domain HPY16_01835 PF01699 Sodium/calcium exchanger protein HPY16_01840 PF00005 ABC transporter HPY16_01845 PF02405 Permease MlaE HPY16_01850 PF02470 MlaD protein HPY16_01855 PF05494 MlaC protein HPY16_01865 PF01722 BolA-like protein HPY16_01870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY16_01875 PF01553 Acyltransferase HPY16_01880 PF01042 Endoribonuclease L-PSP HPY16_01885 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HPY16_01885 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HPY16_01890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY16_01890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY16_01895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY16_01895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY16_01900 PF13638 PIN domain HPY16_01900 PF02562 PhoH-like protein HPY16_01905 PF12137 RNA polymerase recycling family C-terminal HPY16_01905 PF00176 SNF2 family N-terminal domain HPY16_01905 PF18339 RapA N-terminal Tudor like domain 1 HPY16_01905 PF00271 Helicase conserved C-terminal domain HPY16_01905 PF18337 RapA N-terminal Tudor like domain HPY16_01910 PF00849 RNA pseudouridylate synthase HPY16_01915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY16_01915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY16_01920 PF08264 Anticodon-binding domain of tRNA HPY16_01920 PF10458 Valyl tRNA synthetase tRNA binding arm HPY16_01920 PF00133 tRNA synthetases class I (I, L, M and V) HPY16_01925 PF04364 DNA polymerase III chi subunit, HolC HPY16_01930 PF00883 Cytosol aminopeptidase family, catalytic domain HPY16_01930 PF02789 Cytosol aminopeptidase family, N-terminal domain HPY16_01935 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY16_01940 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY16_01955 PF00072 Response regulator receiver domain HPY16_01995 PF00694 Aconitase C-terminal domain HPY16_02000 PF00330 Aconitase family (aconitate hydratase) HPY16_02005 PF00180 Isocitrate/isopropylmalate dehydrogenase HPY16_02010 PF08502 LeuA allosteric (dimerisation) domain HPY16_02010 PF00682 HMGL-like HPY16_02015 PF01569 PAP2 superfamily HPY16_02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_02025 PF03466 LysR substrate binding domain HPY16_02030 PF00501 AMP-binding enzyme HPY16_02035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY16_02035 PF00205 Thiamine pyrophosphate enzyme, central domain HPY16_02035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY16_02040 PF10369 Small subunit of acetolactate synthase HPY16_02045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY16_02045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY16_02045 PF01842 ACT domain HPY16_02050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HPY16_02055 PF01812 5-formyltetrahydrofolate cyclo-ligase family HPY16_02065 PF05164 Cell division protein ZapA HPY16_02070 PF03695 Uncharacterised protein family (UPF0149) HPY16_02075 PF01494 FAD binding domain HPY16_02080 PF01494 FAD binding domain HPY16_02095 PF03937 Flavinator of succinate dehydrogenase HPY16_02105 PF00890 FAD binding domain HPY16_02105 PF02910 Fumarate reductase flavoprotein C-term HPY16_02110 PF08281 Sigma-70, region 4 HPY16_02110 PF04542 Sigma-70 region 2 HPY16_02115 PF03872 Anti sigma-E protein RseA, N-terminal domain HPY16_02115 PF03873 Anti sigma-E protein RseA, C-terminal domain HPY16_02120 PF03888 MucB/RseB N-terminal domain HPY16_02120 PF17188 MucB/RseB C-terminal domain HPY16_02130 PF00679 Elongation factor G C-terminus HPY16_02130 PF00009 Elongation factor Tu GTP binding domain HPY16_02130 PF03144 Elongation factor Tu domain 2 HPY16_02130 PF06421 GTP-binding protein LepA C-terminus HPY16_02135 PF10502 Signal peptidase, peptidase S26 HPY16_02140 PF00035 Double-stranded RNA binding motif HPY16_02140 PF14622 Ribonuclease-III-like HPY16_02145 PF01926 50S ribosome-binding GTPase HPY16_02145 PF07650 KH domain HPY16_02150 PF02565 Recombination protein O C terminal HPY16_02150 PF11967 Recombination protein O N terminal HPY16_02155 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HPY16_02160 PF01648 4'-phosphopantetheinyl transferase superfamily HPY16_02175 PF00990 Diguanylate cyclase, GGDEF domain HPY16_02180 PF01627 Hpt domain HPY16_02180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY16_02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_02180 PF00512 His Kinase A (phospho-acceptor) domain HPY16_02180 PF00072 Response regulator receiver domain HPY16_02180 PF00672 HAMP domain HPY16_02185 PF05958 tRNA (Uracil-5-)-methyltransferase HPY16_02185 PF01938 TRAM domain HPY16_02190 PF04607 Region found in RelA / SpoT proteins HPY16_02190 PF02824 TGS domain HPY16_02190 PF13291 ACT domain HPY16_02195 PF03819 MazG nucleotide pyrophosphohydrolase domain HPY16_02200 PF06418 CTP synthase N-terminus HPY16_02200 PF00117 Glutamine amidotransferase class-I HPY16_02205 PF00113 Enolase, C-terminal TIM barrel domain HPY16_02205 PF03952 Enolase, N-terminal domain HPY16_02210 PF01966 HD domain HPY16_02210 PF01743 Poly A polymerase head domain HPY16_02210 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY16_02225 PF08239 Bacterial SH3 domain HPY16_02230 PF01384 Phosphate transporter family HPY16_02235 PF01865 Protein of unknown function DUF47 HPY16_02240 PF01928 CYTH domain HPY16_02245 PF14706 Transposase DNA-binding HPY16_02245 PF01609 Transposase DDE domain HPY16_02245 PF02281 Transposase Tn5 dimerisation domain HPY16_02250 PF00672 HAMP domain HPY16_02250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_02250 PF02743 Cache domain HPY16_02255 PF08335 GlnD PII-uridylyltransferase HPY16_02255 PF03710 Glutamate-ammonia ligase adenylyltransferase HPY16_02260 PF01467 Cytidylyltransferase-like HPY16_02260 PF00294 pfkB family carbohydrate kinase HPY16_02265 PF02321 Outer membrane efflux protein HPY16_02270 PF00293 NUDIX domain HPY16_02275 PF06853 Protein of unknown function (DUF1249) HPY16_02280 PF00149 Calcineurin-like phosphoesterase HPY16_02285 PF05728 Uncharacterised protein family (UPF0227) HPY16_02290 PF01751 Toprim domain HPY16_02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_02290 PF00986 DNA gyrase B subunit, carboxyl terminus HPY16_02290 PF00204 DNA gyrase B HPY16_02295 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY16_02295 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY16_02300 PF03884 DNA gyrase inhibitor YacG HPY16_02305 PF07072 Cell division protein HPY16_02310 PF01121 Dephospho-CoA kinase HPY16_02315 PF01478 Type IV leader peptidase family HPY16_02315 PF06750 Bacterial Peptidase A24 N-terminal domain HPY16_02320 PF00482 Type II secretion system (T2SS), protein F HPY16_02325 PF00437 Type II/IV secretion system protein HPY16_02325 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HPY16_02330 PF07963 Prokaryotic N-terminal methylation motif HPY16_02330 PF00114 Pilin (bacterial filament) HPY16_02335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HPY16_02335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HPY16_02340 PF01510 N-acetylmuramoyl-L-alanine amidase HPY16_02345 PF14706 Transposase DNA-binding HPY16_02345 PF01609 Transposase DDE domain HPY16_02345 PF02281 Transposase Tn5 dimerisation domain HPY16_02350 PF00258 Flavodoxin HPY16_02355 PF02899 Phage integrase, N-terminal SAM-like domain HPY16_02355 PF00589 Phage integrase family HPY16_02360 PF10411 Disulfide bond isomerase protein N-terminus HPY16_02360 PF13098 Thioredoxin-like domain HPY16_02365 PF01368 DHH family HPY16_02365 PF17768 RecJ OB domain HPY16_02365 PF02272 DHHA1 domain HPY16_02370 PF00392 Bacterial regulatory proteins, gntR family HPY16_02370 PF07729 FCD domain HPY16_02375 PF17831 Pyruvate dehydrogenase E1 component middle domain HPY16_02375 PF00456 Transketolase, thiamine diphosphate binding domain HPY16_02380 PF02817 e3 binding domain HPY16_02380 PF00364 Biotin-requiring enzyme HPY16_02380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY16_02385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY16_02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_02395 PF01795 MraW methylase family HPY16_02400 PF04999 Cell division protein FtsL HPY16_02405 PF03717 Penicillin-binding Protein dimerisation domain HPY16_02405 PF00905 Penicillin binding protein transpeptidase domain HPY16_02410 PF08245 Mur ligase middle domain HPY16_02410 PF01225 Mur ligase family, catalytic domain HPY16_02410 PF02875 Mur ligase family, glutamate ligase domain HPY16_02415 PF08245 Mur ligase middle domain HPY16_02415 PF02875 Mur ligase family, glutamate ligase domain HPY16_02415 PF01225 Mur ligase family, catalytic domain HPY16_02420 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HPY16_02420 PF00953 Glycosyl transferase family 4 HPY16_02425 PF02875 Mur ligase family, glutamate ligase domain HPY16_02425 PF08245 Mur ligase middle domain HPY16_02430 PF01098 Cell cycle protein HPY16_02435 PF03033 Glycosyltransferase family 28 N-terminal domain HPY16_02435 PF04101 Glycosyltransferase family 28 C-terminal domain HPY16_02440 PF02875 Mur ligase family, glutamate ligase domain HPY16_02440 PF08245 Mur ligase middle domain HPY16_02440 PF01225 Mur ligase family, catalytic domain HPY16_02450 PF02491 SHS2 domain inserted in FTSA HPY16_02455 PF12327 FtsZ family, C-terminal domain HPY16_02455 PF00091 Tubulin/FtsZ family, GTPase domain HPY16_02460 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HPY16_02470 PF02810 SEC-C motif HPY16_02470 PF01043 SecA preprotein cross-linking domain HPY16_02470 PF07517 SecA DEAD-like domain HPY16_02470 PF07516 SecA Wing and Scaffold domain HPY16_02475 PF00293 NUDIX domain HPY16_02480 PF05173 Dihydrodipicolinate reductase, C-terminus HPY16_02480 PF01113 Dihydrodipicolinate reductase, N-terminus HPY16_02490 PF00117 Glutamine amidotransferase class-I HPY16_02490 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HPY16_02495 PF02142 MGS-like domain HPY16_02495 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HPY16_02495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY16_02510 PF01925 Sulfite exporter TauE/SafE HPY16_02515 PF03466 LysR substrate binding domain HPY16_02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_02520 PF03458 UPF0126 domain HPY16_02525 PF01497 Periplasmic binding protein HPY16_02535 PF01048 Phosphorylase superfamily HPY16_02545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY16_02545 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_02550 PF01493 GXGXG motif HPY16_02550 PF04898 Glutamate synthase central domain HPY16_02550 PF00310 Glutamine amidotransferases class-II HPY16_02550 PF01645 Conserved region in glutamate synthase HPY16_02555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY16_02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_02560 PF00310 Glutamine amidotransferases class-II HPY16_02560 PF01493 GXGXG motif HPY16_02560 PF04898 Glutamate synthase central domain HPY16_02560 PF01645 Conserved region in glutamate synthase HPY16_02565 PF16199 Radical_SAM C-terminal domain HPY16_02565 PF04055 Radical SAM superfamily HPY16_02570 PF00990 Diguanylate cyclase, GGDEF domain HPY16_02570 PF01590 GAF domain HPY16_02570 PF00563 EAL domain HPY16_02570 PF00360 Phytochrome region HPY16_02575 PF00072 Response regulator receiver domain HPY16_02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_02575 PF00512 His Kinase A (phospho-acceptor) domain HPY16_02575 PF18415 Histidine kinase receptor ArcB trans-membrane domain HPY16_02575 PF01627 Hpt domain HPY16_02575 PF00989 PAS fold HPY16_02580 PF00072 Response regulator receiver domain HPY16_02580 PF00486 Transcriptional regulatory protein, C terminal HPY16_02590 PF03737 Aldolase/RraA HPY16_02605 PF00742 Homoserine dehydrogenase HPY16_02605 PF03447 Homoserine dehydrogenase, NAD binding domain HPY16_02605 PF13840 ACT domain HPY16_02605 PF01842 ACT domain HPY16_02605 PF00696 Amino acid kinase family HPY16_02610 PF00288 GHMP kinases N terminal domain HPY16_02610 PF08544 GHMP kinases C terminal HPY16_02615 PF00291 Pyridoxal-phosphate dependent enzyme HPY16_02615 PF14821 Threonine synthase N terminus HPY16_02620 PF01228 Glycine radical HPY16_02625 PF01261 Xylose isomerase-like TIM barrel HPY16_02630 PF03167 Uracil DNA glycosylase superfamily HPY16_02645 PF01235 Sodium:alanine symporter family HPY16_02650 PF03883 Peroxide stress protein YaaA HPY16_02660 PF01026 TatD related DNase HPY16_02665 PF07670 Nucleoside recognition HPY16_02665 PF01773 Na+ dependent nucleoside transporter N-terminus HPY16_02665 PF07662 Na+ dependent nucleoside transporter C-terminus HPY16_02675 PF01791 DeoC/LacD family aldolase HPY16_02680 PF02885 Glycosyl transferase family, helical bundle domain HPY16_02680 PF00591 Glycosyl transferase family, a/b domain HPY16_02680 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HPY16_02685 PF01676 Metalloenzyme superfamily HPY16_02690 PF01048 Phosphorylase superfamily HPY16_02700 PF18429 Domain of unknown function (DUF5609) HPY16_02710 PF18073 Rubredoxin metal binding domain HPY16_02715 PF03144 Elongation factor Tu domain 2 HPY16_02715 PF00009 Elongation factor Tu GTP binding domain HPY16_02715 PF03764 Elongation factor G, domain IV HPY16_02715 PF14492 Elongation Factor G, domain II HPY16_02715 PF00679 Elongation factor G C-terminus HPY16_02720 PF00501 AMP-binding enzyme HPY16_02725 PF00072 Response regulator receiver domain HPY16_02735 PF02929 Beta galactosidase small chain HPY16_02735 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HPY16_02735 PF02837 Glycosyl hydrolases family 2, sugar binding domain HPY16_02735 PF16353 Domain of unknown function(DUF4981) HPY16_02735 PF00703 Glycosyl hydrolases family 2 HPY16_02740 PF00356 Bacterial regulatory proteins, lacI family HPY16_02745 PF01588 Putative tRNA binding domain HPY16_02755 PF01544 CorA-like Mg2+ transporter protein HPY16_02760 PF18030 RimK PreATP-grasp domain HPY16_02760 PF08443 RimK-like ATP-grasp domain HPY16_02760 PF02080 TrkA-C domain HPY16_02765 PF00583 Acetyltransferase (GNAT) family HPY16_02775 PF14602 Hexapeptide repeat of succinyl-transferase HPY16_02775 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HPY16_02780 PF07130 YebG protein HPY16_02785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_02785 PF03466 LysR substrate binding domain HPY16_02795 PF17946 RecC C-terminal domain HPY16_02800 PF00580 UvrD/REP helicase N-terminal domain HPY16_02800 PF12705 PD-(D/E)XK nuclease superfamily HPY16_02800 PF13361 UvrD-like helicase C-terminal domain HPY16_02805 PF13538 UvrD-like helicase C-terminal domain HPY16_02815 PF00583 Acetyltransferase (GNAT) family HPY16_02815 PF00696 Amino acid kinase family HPY16_02825 PF03562 MltA specific insert domain HPY16_02825 PF06725 3D domain HPY16_02830 PF00899 ThiF family HPY16_02835 PF02657 Fe-S metabolism associated domain HPY16_02840 PF00266 Aminotransferase class-V HPY16_02845 PF01965 DJ-1/PfpI family HPY16_02850 PF02558 Ketopantoate reductase PanE/ApbA HPY16_02850 PF08546 Ketopantoate reductase PanE/ApbA C terminal HPY16_02855 PF03502 Nucleoside-specific channel-forming protein, Tsx HPY16_02865 PF04545 Sigma-70, region 4 HPY16_02865 PF04542 Sigma-70 region 2 HPY16_02875 PF07690 Major Facilitator Superfamily HPY16_02880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY16_02890 PF05175 Methyltransferase small domain HPY16_02895 PF01722 BolA-like protein HPY16_02900 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HPY16_02900 PF11973 NQRA C-terminal domain HPY16_02905 PF03116 NQR2, RnfD, RnfE family HPY16_02910 PF04205 FMN-binding domain HPY16_02915 PF02508 Rnf-Nqr subunit, membrane protein HPY16_02920 PF02508 Rnf-Nqr subunit, membrane protein HPY16_02925 PF00970 Oxidoreductase FAD-binding domain HPY16_02925 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY16_02925 PF00175 Oxidoreductase NAD-binding domain HPY16_02930 PF02424 ApbE family HPY16_02940 PF11798 IMS family HHH motif HPY16_02940 PF00817 impB/mucB/samB family HPY16_02950 PF17158 Membrane-associated sensor, integral membrane domain HPY16_02950 PF00990 Diguanylate cyclase, GGDEF domain HPY16_02955 PF00209 Sodium:neurotransmitter symporter family HPY16_02965 PF18030 RimK PreATP-grasp domain HPY16_02965 PF08443 RimK-like ATP-grasp domain HPY16_02970 PF18030 RimK PreATP-grasp domain HPY16_02970 PF08443 RimK-like ATP-grasp domain HPY16_02975 PF07687 Peptidase dimerisation domain HPY16_02975 PF01546 Peptidase family M20/M25/M40 HPY16_02980 PF00860 Permease family HPY16_02985 PF00156 Phosphoribosyl transferase domain HPY16_02995 PF07417 Sigma factor-binding transcriptional regulator Crl HPY16_03000 PF01472 PUA domain HPY16_03000 PF00696 Amino acid kinase family HPY16_03005 PF00171 Aldehyde dehydrogenase family HPY16_03010 PF03477 ATP cone domain HPY16_03015 PF01872 RibD C-terminal domain HPY16_03015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY16_03020 PF00677 Lumazine binding domain HPY16_03025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY16_03025 PF00925 GTP cyclohydrolase II HPY16_03030 PF00885 6,7-dimethyl-8-ribityllumazine synthase HPY16_03035 PF01029 NusB family HPY16_03040 PF02769 AIR synthase related protein, C-terminal domain HPY16_03040 PF00586 AIR synthase related protein, N-terminal domain HPY16_03045 PF04608 Phosphatidylglycerophosphatase A HPY16_03050 PF11944 Protein of unknown function (DUF3461) HPY16_03055 PF01909 Nucleotidyltransferase domain HPY16_03055 PF01966 HD domain HPY16_03055 PF08335 GlnD PII-uridylyltransferase HPY16_03060 PF00557 Metallopeptidase family M24 HPY16_03065 PF00318 Ribosomal protein S2 HPY16_03070 PF00889 Elongation factor TS HPY16_03075 PF00696 Amino acid kinase family HPY16_03080 PF01765 Ribosome recycling factor HPY16_03085 PF01255 Putative undecaprenyl diphosphate synthase HPY16_03095 PF13288 DXP reductoisomerase C-terminal domain HPY16_03095 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPY16_03095 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPY16_03100 PF02163 Peptidase family M50 HPY16_03100 PF17820 PDZ domain HPY16_03105 PF01103 Surface antigen HPY16_03105 PF07244 Surface antigen variable number repeat HPY16_03110 PF03938 Outer membrane protein (OmpH-like) HPY16_03115 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_03115 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPY16_03120 PF07977 FabA-like domain HPY16_03125 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HPY16_03125 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_03130 PF02684 Lipid-A-disaccharide synthetase HPY16_03135 PF01351 Ribonuclease HII HPY16_03140 PF02811 PHP domain HPY16_03140 PF14579 Helix-hairpin-helix motif HPY16_03140 PF01336 OB-fold nucleic acid binding domain HPY16_03140 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPY16_03140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPY16_03145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HPY16_03150 PF14706 Transposase DNA-binding HPY16_03150 PF01609 Transposase DDE domain HPY16_03150 PF02281 Transposase Tn5 dimerisation domain HPY16_03155 PF09179 TilS substrate binding domain HPY16_03155 PF01171 PP-loop family HPY16_03155 PF11734 TilS substrate C-terminal domain HPY16_03160 PF00034 Cytochrome c HPY16_03165 PF05870 Phenolic acid decarboxylase (PAD) HPY16_03170 PF00543 Nitrogen regulatory protein P-II HPY16_03175 PF03372 Endonuclease/Exonuclease/phosphatase family HPY16_03180 PF01464 Transglycosylase SLT domain HPY16_03180 PF01476 LysM domain HPY16_03185 PF16123 Hydroxyacylglutathione hydrolase C-terminus HPY16_03185 PF00753 Metallo-beta-lactamase superfamily HPY16_03190 PF08241 Methyltransferase domain HPY16_03195 PF00075 RNase H HPY16_03200 PF00929 Exonuclease HPY16_03210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY16_03210 PF09317 Domain of unknown function (DUF1974) HPY16_03210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY16_03210 PF02770 Acyl-CoA dehydrogenase, middle domain HPY16_03215 PF13580 SIS domain HPY16_03220 PF13230 Glutamine amidotransferases class-II HPY16_03225 PF00551 Formyl transferase HPY16_03230 PF00586 AIR synthase related protein, N-terminal domain HPY16_03230 PF02769 AIR synthase related protein, C-terminal domain HPY16_03240 PF00990 Diguanylate cyclase, GGDEF domain HPY16_03240 PF08448 PAS fold HPY16_03245 PF00849 RNA pseudouridylate synthase HPY16_03245 PF01479 S4 domain HPY16_03250 PF01713 Smr domain HPY16_03265 PF01963 TraB family HPY16_03270 PF03173 Putative carbohydrate binding domain HPY16_03270 PF02838 Glycosyl hydrolase family 20, domain 2 HPY16_03270 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY16_03270 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HPY16_03280 PF00403 Heavy-metal-associated domain HPY16_03285 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY16_03290 PF00691 OmpA family HPY16_03290 PF01389 OmpA-like transmembrane domain HPY16_03300 PF07715 TonB-dependent Receptor Plug Domain HPY16_03305 PF08021 Siderophore-interacting FAD-binding domain HPY16_03305 PF04954 Siderophore-interacting protein HPY16_03310 PF00550 Phosphopantetheine attachment site HPY16_03310 PF08242 Methyltransferase domain HPY16_03310 PF00668 Condensation domain HPY16_03310 PF00501 AMP-binding enzyme HPY16_03345 PF00072 Response regulator receiver domain HPY16_03345 PF01584 CheW-like domain HPY16_03350 PF03705 CheR methyltransferase, all-alpha domain HPY16_03350 PF01739 CheR methyltransferase, SAM binding domain HPY16_03355 PF00460 Flagella basal body rod protein HPY16_03360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY16_03360 PF00460 Flagella basal body rod protein HPY16_03365 PF03963 Flagellar hook capping protein - N-terminal region HPY16_03365 PF13861 FlgD Tudor-like domain HPY16_03365 PF13860 FlgD Ig-like domain HPY16_03370 PF07559 Flagellar basal body protein FlaE HPY16_03370 PF00460 Flagella basal body rod protein HPY16_03370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY16_03375 PF00460 Flagella basal body rod protein HPY16_03375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY16_03380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY16_03380 PF00460 Flagella basal body rod protein HPY16_03385 PF02107 Flagellar L-ring protein HPY16_03390 PF02119 Flagellar P-ring protein HPY16_03395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HPY16_03395 PF10135 Rod binding protein HPY16_03400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY16_03400 PF07196 Flagellin hook IN motif HPY16_03410 PF00669 Bacterial flagellin N-terminal helical region HPY16_03410 PF07196 Flagellin hook IN motif HPY16_03410 PF00700 Bacterial flagellin C-terminal helical region HPY16_03415 PF00700 Bacterial flagellin C-terminal helical region HPY16_03415 PF00669 Bacterial flagellin N-terminal helical region HPY16_03415 PF07196 Flagellin hook IN motif HPY16_03500 PF06071 Protein of unknown function (DUF933) HPY16_03500 PF01926 50S ribosome-binding GTPase HPY16_03505 PF01195 Peptidyl-tRNA hydrolase HPY16_03510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPY16_03510 PF14572 Phosphoribosyl synthetase-associated domain HPY16_03515 PF00288 GHMP kinases N terminal domain HPY16_03515 PF08544 GHMP kinases C terminal HPY16_03520 PF03550 Outer membrane lipoprotein LolB HPY16_03525 PF01488 Shikimate / quinate 5-dehydrogenase HPY16_03525 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HPY16_03525 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HPY16_03530 PF00472 RF-1 domain HPY16_03530 PF03462 PCRF domain HPY16_03535 PF13847 Methyltransferase domain HPY16_03535 PF17827 PrmC N-terminal domain HPY16_03540 PF04247 Invasion gene expression up-regulator, SirB HPY16_03545 PF13369 Transglutaminase-like superfamily HPY16_03550 PF00793 DAHP synthetase I family HPY16_03555 PF02872 5'-nucleotidase, C-terminal domain HPY16_03555 PF00149 Calcineurin-like phosphoesterase HPY16_03560 PF04073 Aminoacyl-tRNA editing domain HPY16_03565 PF00860 Permease family HPY16_03580 PF03358 NADPH-dependent FMN reductase HPY16_03585 PF03960 ArsC family HPY16_03590 PF01435 Peptidase family M48 HPY16_03590 PF13181 Tetratricopeptide repeat HPY16_03600 PF01594 AI-2E family transporter HPY16_03605 PF00672 HAMP domain HPY16_03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_03605 PF02743 Cache domain HPY16_03610 PF00578 AhpC/TSA family HPY16_03620 PF00701 Dihydrodipicolinate synthetase family HPY16_03625 PF06804 NlpB/DapX lipoprotein HPY16_03635 PF02557 D-alanyl-D-alanine carboxypeptidase HPY16_03640 PF01546 Peptidase family M20/M25/M40 HPY16_03640 PF07687 Peptidase dimerisation domain HPY16_03645 PF03960 ArsC family HPY16_03660 PF11143 Protein of unknown function (DUF2919) HPY16_03665 PF04261 Dyp-type peroxidase family HPY16_03670 PF00669 Bacterial flagellin N-terminal helical region HPY16_03670 PF00700 Bacterial flagellin C-terminal helical region HPY16_03670 PF07196 Flagellin hook IN motif HPY16_03675 PF00669 Bacterial flagellin N-terminal helical region HPY16_03675 PF00700 Bacterial flagellin C-terminal helical region HPY16_03675 PF07196 Flagellin hook IN motif HPY16_03680 PF00700 Bacterial flagellin C-terminal helical region HPY16_03680 PF07196 Flagellin hook IN motif HPY16_03680 PF00669 Bacterial flagellin N-terminal helical region HPY16_03685 PF03646 FlaG protein HPY16_03690 PF07196 Flagellin hook IN motif HPY16_03690 PF07195 Flagellar hook-associated protein 2 C-terminus HPY16_03690 PF02465 Flagellar hook-associated protein 2 N-terminus HPY16_03700 PF02561 Flagellar protein FliS HPY16_03705 PF02954 Bacterial regulatory protein, Fis family HPY16_03705 PF00158 Sigma-54 interaction domain HPY16_03705 PF06490 Flagellar regulatory protein FleQ HPY16_03710 PF13426 PAS domain HPY16_03710 PF08447 PAS fold HPY16_03710 PF00989 PAS fold HPY16_03710 PF00512 His Kinase A (phospho-acceptor) domain HPY16_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_03710 PF13493 Domain of unknown function (DUF4118) HPY16_03715 PF00072 Response regulator receiver domain HPY16_03715 PF02954 Bacterial regulatory protein, Fis family HPY16_03715 PF00158 Sigma-54 interaction domain HPY16_03720 PF02049 Flagellar hook-basal body complex protein FliE HPY16_03725 PF01514 Secretory protein of YscJ/FliF family HPY16_03725 PF08345 Flagellar M-ring protein C-terminal HPY16_03730 PF14842 FliG N-terminal domain HPY16_03730 PF14841 FliG middle domain HPY16_03730 PF01706 FliG C-terminal domain HPY16_03735 PF02108 Flagellar assembly protein FliH HPY16_03740 PF18269 T3SS EscN ATPase C-terminal domain HPY16_03740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY16_03760 PF03748 Flagellar basal body-associated protein FliL HPY16_03765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY16_03765 PF02154 Flagellar motor switch protein FliM HPY16_03770 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY16_03775 PF04347 Flagellar biosynthesis protein, FliO HPY16_03780 PF00813 FliP family HPY16_03785 PF01313 Bacterial export proteins, family 3 HPY16_03790 PF01311 Bacterial export proteins, family 1 HPY16_03795 PF01312 FlhB HrpN YscU SpaS Family HPY16_03800 PF01713 Smr domain HPY16_03805 PF05175 Methyltransferase small domain HPY16_03810 PF01264 Chorismate synthase HPY16_03815 PF03458 UPF0126 domain HPY16_03820 PF04315 Elongation factor P hydroxylase HPY16_03825 PF08891 YfcL protein HPY16_03830 PF03358 NADPH-dependent FMN reductase HPY16_03835 PF01266 FAD dependent oxidoreductase HPY16_03835 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HPY16_03840 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY16_03840 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY16_03845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY16_03845 PF11890 Domain of unknown function (DUF3410) HPY16_03845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY16_03850 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY16_03850 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY16_03855 PF01475 Ferric uptake regulator family HPY16_03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_03865 PF03466 LysR substrate binding domain HPY16_03870 PF03788 LrgA family HPY16_03875 PF04172 LrgB-like family HPY16_03880 PF00258 Flavodoxin HPY16_03890 PF12697 Alpha/beta hydrolase family HPY16_03895 PF17206 SeqA protein N-terminal domain HPY16_03895 PF03925 SeqA protein C-terminal domain HPY16_03900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY16_03900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY16_03900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY16_03900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY16_03910 PF01784 NIF3 (NGG1p interacting factor 3) HPY16_03915 PF00285 Citrate synthase, C-terminal domain HPY16_03920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY16_03925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY16_03930 PF02910 Fumarate reductase flavoprotein C-term HPY16_03930 PF00890 FAD binding domain HPY16_03935 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY16_03940 PF16870 2-oxoglutarate dehydrogenase C-terminal HPY16_03940 PF16078 2-oxoglutarate dehydrogenase N-terminus HPY16_03940 PF00676 Dehydrogenase E1 component HPY16_03940 PF02779 Transketolase, pyrimidine binding domain HPY16_03945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY16_03945 PF00364 Biotin-requiring enzyme HPY16_03945 PF02817 e3 binding domain HPY16_03950 PF08442 ATP-grasp domain HPY16_03950 PF00549 CoA-ligase HPY16_03955 PF02629 CoA binding domain HPY16_03955 PF00549 CoA-ligase HPY16_03960 PF00950 ABC 3 transport family HPY16_03965 PF00005 ABC transporter HPY16_03970 PF01297 Zinc-uptake complex component A periplasmic HPY16_03975 PF12833 Helix-turn-helix domain HPY16_03975 PF02311 AraC-like ligand binding domain HPY16_03980 PF04023 FeoA domain HPY16_03985 PF07670 Nucleoside recognition HPY16_03985 PF02421 Ferrous iron transport protein B HPY16_03985 PF07664 Ferrous iron transport protein B C terminus HPY16_04000 PF03485 Arginyl tRNA synthetase N terminal domain HPY16_04000 PF00750 tRNA synthetases class I (R) HPY16_04000 PF05746 DALR anticodon binding domain HPY16_04010 PF05193 Peptidase M16 inactive domain HPY16_04010 PF00675 Insulinase (Peptidase family M16) HPY16_04015 PF00300 Histidine phosphatase superfamily (branch 1) HPY16_04020 PF00771 FHIPEP family HPY16_04025 PF00448 SRP54-type protein, GTPase domain HPY16_04030 PF10609 NUBPL iron-transfer P-loop NTPase HPY16_04035 PF04545 Sigma-70, region 4 HPY16_04035 PF04539 Sigma-70 region 3 HPY16_04035 PF04542 Sigma-70 region 2 HPY16_04040 PF00072 Response regulator receiver domain HPY16_04045 PF04344 Chemotaxis phosphatase, CheZ HPY16_04050 PF02895 Signal transducing histidine kinase, homodimeric domain HPY16_04050 PF00072 Response regulator receiver domain HPY16_04050 PF01627 Hpt domain HPY16_04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_04050 PF01584 CheW-like domain HPY16_04055 PF01339 CheB methylesterase HPY16_04055 PF00072 Response regulator receiver domain HPY16_04060 PF13614 AAA domain HPY16_04070 PF01584 CheW-like domain HPY16_04080 PF00005 ABC transporter HPY16_04085 PF03379 CcmB protein HPY16_04090 PF01578 Cytochrome C assembly protein HPY16_04095 PF04995 Heme exporter protein D (CcmD) HPY16_04100 PF03100 CcmE HPY16_04105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HPY16_04105 PF01578 Cytochrome C assembly protein HPY16_04110 PF08534 Redoxin HPY16_04115 PF03918 Cytochrome C biogenesis protein HPY16_04125 PF04333 MlaA lipoprotein HPY16_04140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY16_04140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY16_04145 PF00462 Glutaredoxin HPY16_04150 PF01131 DNA topoisomerase HPY16_04150 PF01751 Toprim domain HPY16_04155 PF00850 Histone deacetylase domain HPY16_04170 PF11893 Domain of unknown function (DUF3413) HPY16_04170 PF00884 Sulfatase HPY16_04175 PF07208 Protein of unknown function (DUF1414) HPY16_04180 PF04245 37-kD nucleoid-associated bacterial protein HPY16_04190 PF03553 Na+/H+ antiporter family HPY16_04195 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY16_04195 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY16_04200 PF01914 MarC family integral membrane protein HPY16_04205 PF00465 Iron-containing alcohol dehydrogenase HPY16_04205 PF00171 Aldehyde dehydrogenase family HPY16_04215 PF00916 Sulfate permease family HPY16_04215 PF01740 STAS domain HPY16_04220 PF00575 S1 RNA binding domain HPY16_04220 PF10150 Ribonuclease E/G family HPY16_04220 PF12111 Polyribonucleotide phosphorylase C terminal HPY16_04225 PF01479 S4 domain HPY16_04225 PF00849 RNA pseudouridylate synthase HPY16_04230 PF02545 Maf-like protein HPY16_04235 PF02620 Large ribosomal RNA subunit accumulation protein YceD HPY16_04240 PF01783 Ribosomal L32p protein family HPY16_04245 PF02504 Fatty acid synthesis protein HPY16_04250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY16_04250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY16_04255 PF00698 Acyl transferase domain HPY16_04265 PF00550 Phosphopantetheine attachment site HPY16_04270 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY16_04270 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY16_04275 PF01063 Amino-transferase class IV HPY16_04280 PF02618 YceG-like family HPY16_04285 PF02223 Thymidylate kinase HPY16_04290 PF09115 DNA polymerase III, delta subunit, C terminal HPY16_04295 PF01026 TatD related DNase HPY16_04300 PF00367 phosphotransferase system, EIIB HPY16_04300 PF02378 Phosphotransferase system, EIIC HPY16_04305 PF02281 Transposase Tn5 dimerisation domain HPY16_04305 PF14706 Transposase DNA-binding HPY16_04305 PF01609 Transposase DDE domain HPY16_04315 PF00209 Sodium:neurotransmitter symporter family HPY16_04330 PF01734 Patatin-like phospholipase HPY16_04335 PF02887 Pyruvate kinase, alpha/beta domain HPY16_04335 PF00224 Pyruvate kinase, barrel domain HPY16_04340 PF00480 ROK family HPY16_04345 PF01584 CheW-like domain HPY16_04345 PF00072 Response regulator receiver domain HPY16_04360 PF13847 Methyltransferase domain HPY16_04370 PF01263 Aldose 1-epimerase HPY16_04375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY16_04375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY16_04380 PF01641 SelR domain HPY16_04390 PF07023 Protein of unknown function (DUF1315) HPY16_04395 PF00710 Asparaginase, N-terminal HPY16_04395 PF17763 Glutaminase/Asparaginase C-terminal domain HPY16_04400 PF01343 Peptidase family S49 HPY16_04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_04405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY16_04410 PF00551 Formyl transferase HPY16_04410 PF01842 ACT domain HPY16_04420 PF13307 Helicase C-terminal domain HPY16_04420 PF04851 Type III restriction enzyme, res subunit HPY16_04425 PF00814 Glycoprotease family HPY16_04440 PF00561 alpha/beta hydrolase fold HPY16_04445 PF13193 AMP-binding enzyme C-terminal domain HPY16_04445 PF00501 AMP-binding enzyme HPY16_04450 PF01612 3'-5' exonuclease HPY16_04450 PF00570 HRDC domain HPY16_04465 PF13286 Phosphohydrolase-associated domain HPY16_04465 PF01966 HD domain HPY16_04475 PF00155 Aminotransferase class I and II HPY16_04480 PF00425 chorismate binding enzyme HPY16_04485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY16_04485 PF16582 Middle domain of thiamine pyrophosphate HPY16_04485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY16_04490 PF12697 Alpha/beta hydrolase family HPY16_04495 PF00378 Enoyl-CoA hydratase/isomerase HPY16_04500 PF13378 Enolase C-terminal domain-like HPY16_04505 PF13193 AMP-binding enzyme C-terminal domain HPY16_04505 PF00501 AMP-binding enzyme HPY16_04510 PF03594 Benzoate membrane transport protein HPY16_04515 PF07690 Major Facilitator Superfamily HPY16_04535 PF04170 NlpE N-terminal domain HPY16_04540 PF03776 Septum formation topological specificity factor MinE HPY16_04545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY16_04550 PF05209 Septum formation inhibitor MinC, N-terminal domain HPY16_04550 PF03775 Septum formation inhibitor MinC, C-terminal domain HPY16_04555 PF05166 YcgL domain HPY16_04560 PF13406 Transglycosylase SLT domain HPY16_04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_04565 PF03466 LysR substrate binding domain HPY16_04570 PF01773 Na+ dependent nucleoside transporter N-terminus HPY16_04570 PF07670 Nucleoside recognition HPY16_04570 PF07662 Na+ dependent nucleoside transporter C-terminus HPY16_04575 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY16_04580 PF01568 Molydopterin dinucleotide binding domain HPY16_04580 PF00384 Molybdopterin oxidoreductase HPY16_04580 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY16_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_04590 PF03466 LysR substrate binding domain HPY16_04595 PF01494 FAD binding domain HPY16_04600 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HPY16_04610 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPY16_04610 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPY16_04620 PF01797 Transposase IS200 like HPY16_04655 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HPY16_04660 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY16_04665 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY16_04670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY16_04675 PF00158 Sigma-54 interaction domain HPY16_04675 PF00072 Response regulator receiver domain HPY16_04675 PF02954 Bacterial regulatory protein, Fis family HPY16_04680 PF02743 Cache domain HPY16_04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_04680 PF00512 His Kinase A (phospho-acceptor) domain HPY16_04690 PF05697 Bacterial trigger factor protein (TF) HPY16_04690 PF05698 Bacterial trigger factor protein (TF) C-terminus HPY16_04690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY16_04695 PF00574 Clp protease HPY16_04700 PF10431 C-terminal, D2-small domain, of ClpB protein HPY16_04700 PF06689 ClpX C4-type zinc finger HPY16_04700 PF07724 AAA domain (Cdc48 subfamily) HPY16_04705 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY16_04705 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPY16_04705 PF00004 ATPase family associated with various cellular activities (AAA) HPY16_04710 PF00216 Bacterial DNA-binding protein HPY16_04715 PF13145 PPIC-type PPIASE domain HPY16_04725 PF02224 Cytidylate kinase HPY16_04730 PF00575 S1 RNA binding domain HPY16_04735 PF00216 Bacterial DNA-binding protein HPY16_04740 PF06305 Lipopolysaccharide assembly protein A domain HPY16_04745 PF18073 Rubredoxin metal binding domain HPY16_04750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY16_04755 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HPY16_04765 PF03466 LysR substrate binding domain HPY16_04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_04775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY16_04775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY16_04780 PF01037 Lrp/AsnC ligand binding domain HPY16_04785 PF17854 FtsK alpha domain HPY16_04785 PF09397 Ftsk gamma domain HPY16_04785 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HPY16_04785 PF01580 FtsK/SpoIIIE family HPY16_04790 PF02600 Disulfide bond formation protein DsbB HPY16_04795 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HPY16_04800 PF07840 FadR C-terminal domain HPY16_04800 PF00392 Bacterial regulatory proteins, gntR family HPY16_04810 PF00672 HAMP domain HPY16_04810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_04815 PF01230 HIT domain HPY16_04830 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HPY16_04830 PF13036 Peptidoglycan-synthase activator LpoB HPY16_04840 PF05728 Uncharacterised protein family (UPF0227) HPY16_04845 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_04855 PF07968 Leukocidin/Hemolysin toxin family HPY16_04855 PF12563 Hemolytic toxin N terminal HPY16_04855 PF16458 Beta-prism lectin HPY16_04860 PF16458 Beta-prism lectin HPY16_04860 PF12563 Hemolytic toxin N terminal HPY16_04860 PF07968 Leukocidin/Hemolysin toxin family HPY16_04870 PF02559 CarD-like/TRCF domain HPY16_04870 PF00270 DEAD/DEAH box helicase HPY16_04870 PF00271 Helicase conserved C-terminal domain HPY16_04870 PF03461 TRCF domain HPY16_04870 PF17757 UvrB interaction domain HPY16_04880 PF02687 FtsX-like permease family HPY16_04880 PF12704 MacB-like periplasmic core domain HPY16_04885 PF00005 ABC transporter HPY16_04890 PF12704 MacB-like periplasmic core domain HPY16_04890 PF02687 FtsX-like permease family HPY16_04900 PF03772 Competence protein HPY16_04900 PF00753 Metallo-beta-lactamase superfamily HPY16_04900 PF13567 Domain of unknown function (DUF4131) HPY16_04905 PF00664 ABC transporter transmembrane region HPY16_04905 PF00005 ABC transporter HPY16_04910 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HPY16_04915 PF03966 Trm112p-like protein HPY16_04920 PF02348 Cytidylyltransferase HPY16_04925 PF04293 SpoVR like protein HPY16_04930 PF04285 Protein of unknown function (DUF444) HPY16_04935 PF08298 PrkA AAA domain HPY16_04935 PF06798 PrkA serine protein kinase C-terminal domain HPY16_04940 PF03887 YfbU domain HPY16_04950 PF04055 Radical SAM superfamily HPY16_04955 PF12729 Four helix bundle sensory module for signal transduction HPY16_04955 PF00672 HAMP domain HPY16_04955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_04965 PF01228 Glycine radical HPY16_04965 PF02901 Pyruvate formate lyase-like HPY16_04975 PF00005 ABC transporter HPY16_04980 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_04985 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_04990 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_04995 PF03372 Endonuclease/Exonuclease/phosphatase family HPY16_05000 PF10689 Protein of unknown function (DUF2496) HPY16_05005 PF07445 Primosomal replication protein priC HPY16_05010 PF01925 Sulfite exporter TauE/SafE HPY16_05015 PF13307 Helicase C-terminal domain HPY16_05015 PF06733 DEAD_2 HPY16_05025 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY16_05030 PF02810 SEC-C motif HPY16_05035 PF00563 EAL domain HPY16_05035 PF08668 HDOD domain HPY16_05040 PF00149 Calcineurin-like phosphoesterase HPY16_05045 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY16_05050 PF01406 tRNA synthetases class I (C) catalytic domain HPY16_05050 PF09190 DALR domain HPY16_05055 PF02075 Crossover junction endodeoxyribonuclease RuvC HPY16_05060 PF07499 RuvA, C-terminal domain HPY16_05060 PF01330 RuvA N terminal domain HPY16_05065 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPY16_05065 PF05491 RuvB C-terminal winged helix domain HPY16_05065 PF17864 RuvB AAA lid domain HPY16_05070 PF01654 Cytochrome bd terminal oxidase subunit I HPY16_05075 PF02322 Cytochrome bd terminal oxidase subunit II HPY16_05080 PF08173 Membrane bound YbgT-like protein HPY16_05085 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HPY16_05090 PF03061 Thioesterase superfamily HPY16_05095 PF01618 MotA/TolQ/ExbB proton channel family HPY16_05100 PF02472 Biopolymer transport protein ExbD/TolR HPY16_05110 PF07676 WD40-like Beta Propeller Repeat HPY16_05110 PF04052 TolB amino-terminal domain HPY16_05115 PF00691 OmpA family HPY16_05125 PF02445 Quinolinate synthetase A protein HPY16_05135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_05135 PF00512 His Kinase A (phospho-acceptor) domain HPY16_05135 PF09308 LuxQ, periplasmic HPY16_05135 PF00072 Response regulator receiver domain HPY16_05140 PF06610 L-alanine exporter HPY16_05145 PF01238 Phosphomannose isomerase type I HPY16_05150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY16_05150 PF02378 Phosphotransferase system, EIIC HPY16_05150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY16_05155 PF12833 Helix-turn-helix domain HPY16_05165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY16_05190 PF09905 DNA-binding protein VF530 HPY16_05200 PF00875 DNA photolyase HPY16_05200 PF03441 FAD binding domain of DNA photolyase HPY16_05230 PF00873 AcrB/AcrD/AcrF family HPY16_05235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY16_05245 PF02470 MlaD protein HPY16_05250 PF04403 Paraquat-inducible protein A HPY16_05255 PF00924 Mechanosensitive ion channel HPY16_05255 PF05552 Conserved TM helix HPY16_05275 PF00440 Bacterial regulatory proteins, tetR family HPY16_05275 PF08362 YcdC-like protein, C-terminal region HPY16_05280 PF00171 Aldehyde dehydrogenase family HPY16_05285 PF07383 Protein of unknown function (DUF1496) HPY16_05300 PF16295 Tetracyclin repressor-like, C-terminal domain HPY16_05300 PF00440 Bacterial regulatory proteins, tetR family HPY16_05305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY16_05305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY16_05305 PF02770 Acyl-CoA dehydrogenase, middle domain HPY16_05305 PF09317 Domain of unknown function (DUF1974) HPY16_05310 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY16_05310 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY16_05310 PF07055 Enoyl reductase FAD binding domain HPY16_05315 PF01176 Translation initiation factor 1A / IF-1 HPY16_05320 PF04376 Arginine-tRNA-protein transferase, N terminus HPY16_05320 PF04377 Arginine-tRNA-protein transferase, C terminus HPY16_05325 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HPY16_05330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY16_05335 PF10692 Protein of unknown function (DUF2498) HPY16_05340 PF01396 Topoisomerase DNA binding C4 zinc finger HPY16_05340 PF08272 Topoisomerase I zinc-ribbon-like HPY16_05340 PF01131 DNA topoisomerase HPY16_05340 PF01751 Toprim domain HPY16_05345 PF00483 Nucleotidyl transferase HPY16_05350 PF00534 Glycosyl transferases group 1 HPY16_05350 PF08323 Starch synthase catalytic domain HPY16_05370 PF04993 TfoX N-terminal domain HPY16_05370 PF04994 TfoX C-terminal domain HPY16_05375 PF00356 Bacterial regulatory proteins, lacI family HPY16_05380 PF02613 Nitrate reductase delta subunit HPY16_05385 PF00486 Transcriptional regulatory protein, C terminal HPY16_05385 PF00072 Response regulator receiver domain HPY16_05390 PF02698 DUF218 domain HPY16_05395 PF13847 Methyltransferase domain HPY16_05400 PF03882 MukF winged-helix domain HPY16_05400 PF17192 MukF middle domain HPY16_05400 PF17193 MukF C-terminal domain HPY16_05405 PF04288 MukE-like family HPY16_05410 PF16330 MukB hinge domain HPY16_05410 PF04310 MukB N-terminal HPY16_05415 PF01037 Lrp/AsnC ligand binding domain HPY16_05420 PF01810 LysE type translocator HPY16_05425 PF08497 Radical SAM N-terminal HPY16_05425 PF04055 Radical SAM superfamily HPY16_05425 PF11842 Domain of unknown function (DUF3362) HPY16_05430 PF00563 EAL domain HPY16_05430 PF00990 Diguanylate cyclase, GGDEF domain HPY16_05430 PF08447 PAS fold HPY16_05430 PF08448 PAS fold HPY16_05435 PF05193 Peptidase M16 inactive domain HPY16_05435 PF00675 Insulinase (Peptidase family M16) HPY16_05450 PF03466 LysR substrate binding domain HPY16_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_05455 PF01717 Cobalamin-independent synthase, Catalytic domain HPY16_05455 PF08267 Cobalamin-independent synthase, N-terminal domain HPY16_05465 PF03795 YCII-related domain HPY16_05470 PF03061 Thioesterase superfamily HPY16_05475 PF04279 Intracellular septation protein A HPY16_05485 PF02698 DUF218 domain HPY16_05490 PF01370 NAD dependent epimerase/dehydratase family HPY16_05500 PF01226 Formate/nitrite transporter HPY16_05505 PF06796 Periplasmic nitrate reductase protein NapE HPY16_05510 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY16_05515 PF01568 Molydopterin dinucleotide binding domain HPY16_05515 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY16_05515 PF00384 Molybdopterin oxidoreductase HPY16_05535 PF01368 DHH family HPY16_05535 PF02833 DHHA2 domain HPY16_05555 PF00005 ABC transporter HPY16_05560 PF00005 ABC transporter HPY16_05560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_05565 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY16_05565 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_05570 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_05575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY16_05580 PF00158 Sigma-54 interaction domain HPY16_05580 PF02954 Bacterial regulatory protein, Fis family HPY16_05585 PF04012 PspA/IM30 family HPY16_05600 PF00529 HlyD membrane-fusion protein of T1SS HPY16_05600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY16_05605 PF13533 Biotin-lipoyl like HPY16_05610 PF00873 AcrB/AcrD/AcrF family HPY16_05615 PF03352 Methyladenine glycosylase HPY16_05620 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY16_05625 PF13396 Phospholipase_D-nuclease N-terminal HPY16_05625 PF13091 PLD-like domain HPY16_05630 PF00209 Sodium:neurotransmitter symporter family HPY16_05635 PF00849 RNA pseudouridylate synthase HPY16_05640 PF01066 CDP-alcohol phosphatidyltransferase HPY16_05645 PF00005 ABC transporter HPY16_05650 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_05655 PF13416 Bacterial extracellular solute-binding protein HPY16_05665 PF06945 Protein of unknown function (DUF1289) HPY16_05675 PF03222 Tryptophan/tyrosine permease family HPY16_05685 PF00571 CBS domain HPY16_05685 PF03448 MgtE intracellular N domain HPY16_05685 PF01769 Divalent cation transporter HPY16_05690 PF00072 Response regulator receiver domain HPY16_05690 PF09308 LuxQ, periplasmic HPY16_05690 PF00512 His Kinase A (phospho-acceptor) domain HPY16_05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_05695 PF03707 Bacterial signalling protein N terminal repeat HPY16_05695 PF00990 Diguanylate cyclase, GGDEF domain HPY16_05695 PF00563 EAL domain HPY16_05705 PF04151 Bacterial pre-peptidase C-terminal domain HPY16_05705 PF01752 Collagenase HPY16_05705 PF08453 Peptidase family M9 N-terminal HPY16_05715 PF12793 Sugar transport-related sRNA regulator N-term HPY16_05715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY16_05730 PF09009 Exotoxin A catalytic HPY16_05730 PF09102 Exotoxin A, targeting HPY16_05730 PF09101 Exotoxin A binding HPY16_05740 PF00672 HAMP domain HPY16_05740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_05740 PF12729 Four helix bundle sensory module for signal transduction HPY16_05750 PF01590 GAF domain HPY16_05750 PF00990 Diguanylate cyclase, GGDEF domain HPY16_05750 PF00563 EAL domain HPY16_05750 PF00360 Phytochrome region HPY16_05755 PF01386 Ribosomal L25p family HPY16_05760 PF11808 Phosphate regulon sensor protein PhoR HPY16_05760 PF00512 His Kinase A (phospho-acceptor) domain HPY16_05760 PF00989 PAS fold HPY16_05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_05765 PF00486 Transcriptional regulatory protein, C terminal HPY16_05765 PF00072 Response regulator receiver domain HPY16_05775 PF04851 Type III restriction enzyme, res subunit HPY16_05775 PF00271 Helicase conserved C-terminal domain HPY16_05780 PF00849 RNA pseudouridylate synthase HPY16_05780 PF01479 S4 domain HPY16_05785 PF07690 Major Facilitator Superfamily HPY16_05795 PF11066 Protein of unknown function (DUF2867) HPY16_05795 PF13460 NAD(P)H-binding HPY16_05800 PF01554 MatE HPY16_05805 PF00005 ABC transporter HPY16_05820 PF06965 Na+/H+ antiporter 1 HPY16_05825 PF00202 Aminotransferase class-III HPY16_05830 PF03435 Saccharopine dehydrogenase NADP binding domain HPY16_05830 PF16653 Saccharopine dehydrogenase C-terminal domain HPY16_05840 PF05736 OprF membrane domain HPY16_05840 PF00691 OmpA family HPY16_05845 PF02321 Outer membrane efflux protein HPY16_05865 PF03466 LysR substrate binding domain HPY16_05865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_05875 PF01863 Protein of unknown function DUF45 HPY16_05880 PF05971 RNA methyltransferase HPY16_05895 PF04204 Homoserine O-succinyltransferase HPY16_05915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY16_05930 PF00989 PAS fold HPY16_05930 PF17203 Single cache domain 3 HPY16_05930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HPY16_05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_05935 PF00072 Response regulator receiver domain HPY16_05935 PF12431 Transcriptional regulator HPY16_05945 PF01584 CheW-like domain HPY16_05945 PF00072 Response regulator receiver domain HPY16_05965 PF00990 Diguanylate cyclase, GGDEF domain HPY16_05965 PF00072 Response regulator receiver domain HPY16_05990 PF07690 Major Facilitator Superfamily HPY16_05995 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HPY16_05995 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HPY16_06000 PF10509 Galactokinase galactose-binding signature HPY16_06000 PF08544 GHMP kinases C terminal HPY16_06000 PF00288 GHMP kinases N terminal domain HPY16_06005 PF01263 Aldose 1-epimerase HPY16_06015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY16_06015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY16_06015 PF00205 Thiamine pyrophosphate enzyme, central domain HPY16_06020 PF03306 Alpha-acetolactate decarboxylase HPY16_06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_06025 PF03466 LysR substrate binding domain HPY16_06040 PF06628 Catalase-related immune-responsive HPY16_06040 PF00199 Catalase HPY16_06050 PF00080 Copper/zinc superoxide dismutase (SODC) HPY16_06055 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HPY16_06060 PF00361 Proton-conducting membrane transporter HPY16_06060 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY16_06065 PF03466 LysR substrate binding domain HPY16_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_06070 PF13193 AMP-binding enzyme C-terminal domain HPY16_06070 PF00501 AMP-binding enzyme HPY16_06100 PF00206 Lyase HPY16_06100 PF10415 Fumarase C C-terminus HPY16_06110 PF01654 Cytochrome bd terminal oxidase subunit I HPY16_06115 PF02322 Cytochrome bd terminal oxidase subunit II HPY16_06120 PF00005 ABC transporter HPY16_06120 PF12704 MacB-like periplasmic core domain HPY16_06120 PF02687 FtsX-like permease family HPY16_06125 PF00005 ABC transporter HPY16_06125 PF12704 MacB-like periplasmic core domain HPY16_06125 PF02687 FtsX-like permease family HPY16_06130 PF00005 ABC transporter HPY16_06130 PF12704 MacB-like periplasmic core domain HPY16_06130 PF02687 FtsX-like permease family HPY16_06140 PF00529 HlyD membrane-fusion protein of T1SS HPY16_06150 PF00175 Oxidoreductase NAD-binding domain HPY16_06155 PF04443 Acyl-protein synthetase, LuxE HPY16_06160 PF00296 Luciferase-like monooxygenase HPY16_06165 PF00296 Luciferase-like monooxygenase HPY16_06170 PF02273 Acyl transferase HPY16_06175 PF05893 Acyl-CoA reductase (LuxC) HPY16_06180 PF09297 NADH pyrophosphatase zinc ribbon domain HPY16_06180 PF00293 NUDIX domain HPY16_06185 PF00709 Adenylosuccinate synthetase HPY16_06200 PF00977 Histidine biosynthesis protein HPY16_06205 PF00141 Peroxidase HPY16_06210 PF00232 Glycosyl hydrolase family 1 HPY16_06215 PF00356 Bacterial regulatory proteins, lacI family HPY16_06220 PF01042 Endoribonuclease L-PSP HPY16_06225 PF04074 YhcH/YjgK/YiaL HPY16_06230 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY16_06235 PF00455 DeoR C terminal sensor domain HPY16_06235 PF08220 DeoR-like helix-turn-helix domain HPY16_06240 PF00005 ABC transporter HPY16_06240 PF17912 MalK OB fold domain HPY16_06245 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_06250 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_06255 PF13416 Bacterial extracellular solute-binding protein HPY16_06265 PF01618 MotA/TolQ/ExbB proton channel family HPY16_06270 PF01618 MotA/TolQ/ExbB proton channel family HPY16_06275 PF02472 Biopolymer transport protein ExbD/TolR HPY16_06280 PF03544 Gram-negative bacterial TonB protein C-terminal HPY16_06290 PF14743 DNA ligase OB-like domain HPY16_06290 PF01068 ATP dependent DNA ligase domain HPY16_06300 PF01554 MatE HPY16_06310 PF03881 Fructosamine kinase HPY16_06320 PF00877 NlpC/P60 family HPY16_06325 PF12729 Four helix bundle sensory module for signal transduction HPY16_06325 PF00672 HAMP domain HPY16_06325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_06340 PF00480 ROK family HPY16_06350 PF03454 MoeA C-terminal region (domain IV) HPY16_06350 PF00994 Probable molybdopterin binding domain HPY16_06350 PF03453 MoeA N-terminal region (domain I and II) HPY16_06355 PF12804 MobA-like NTP transferase domain HPY16_06360 PF08402 TOBE domain HPY16_06360 PF00005 ABC transporter HPY16_06365 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_06370 PF12849 PBP superfamily domain HPY16_06375 PF00158 Sigma-54 interaction domain HPY16_06375 PF00072 Response regulator receiver domain HPY16_06375 PF02954 Bacterial regulatory protein, Fis family HPY16_06380 PF00512 His Kinase A (phospho-acceptor) domain HPY16_06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_06380 PF00989 PAS fold HPY16_06385 PF00005 ABC transporter HPY16_06385 PF12848 ABC transporter HPY16_06390 PF02634 FdhD/NarQ family HPY16_06410 PF02613 Nitrate reductase delta subunit HPY16_06420 PF01568 Molydopterin dinucleotide binding domain HPY16_06420 PF00384 Molybdopterin oxidoreductase HPY16_06420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY16_06425 PF13247 4Fe-4S dicluster domain HPY16_06440 PF02146 Sir2 family HPY16_06445 PF04461 Protein of unknown function (DUF520) HPY16_06450 PF00793 DAHP synthetase I family HPY16_06465 PF13509 S1 domain HPY16_06465 PF17783 CvfB-like winged helix domain HPY16_06470 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HPY16_06470 PF01189 16S rRNA methyltransferase RsmB/F HPY16_06470 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HPY16_06475 PF02470 MlaD protein HPY16_06480 PF04403 Paraquat-inducible protein A HPY16_06485 PF00664 ABC transporter transmembrane region HPY16_06485 PF00005 ABC transporter HPY16_06490 PF13185 GAF domain HPY16_06495 PF04352 ProQ/FINO family HPY16_06495 PF17516 ProQ C-terminal domain HPY16_06500 PF17804 Tail specific protease N-terminal domain HPY16_06500 PF03572 Peptidase family S41 HPY16_06500 PF11818 C-terminal domain of tail specific protease (DUF3340) HPY16_06500 PF00595 PDZ domain HPY16_06510 PF01433 Peptidase family M1 domain HPY16_06510 PF11940 Domain of unknown function (DUF3458) Ig-like fold HPY16_06510 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HPY16_06520 PF05088 Bacterial NAD-glutamate dehydrogenase HPY16_06525 PF01180 Dihydroorotate dehydrogenase HPY16_06530 PF07126 Cell-division protein ZapC HPY16_06535 PF02926 THUMP domain HPY16_06535 PF10672 S-adenosylmethionine-dependent methyltransferase HPY16_06535 PF01170 Putative RNA methylase family UPF0020 HPY16_06555 PF04957 Ribosome modulation factor HPY16_06560 PF07977 FabA-like domain HPY16_06565 PF13654 AAA domain HPY16_06565 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY16_06570 PF06303 MatP N-terminal domain HPY16_06570 PF17414 MatP C-terminal ribbon-helix-helix domain HPY16_06585 PF16671 Actin cross-linking domain HPY16_06585 PF07634 RtxA repeat HPY16_06585 PF12146 Serine aminopeptidase, S33 HPY16_06585 PF11713 Peptidase C80 family HPY16_06585 PF11647 Membrane Localization Domain HPY16_06590 PF02794 RTX toxin acyltransferase family HPY16_06600 PF03412 Peptidase C39 family HPY16_06600 PF00664 ABC transporter transmembrane region HPY16_06600 PF00005 ABC transporter HPY16_06610 PF03412 Peptidase C39 family HPY16_06610 PF00664 ABC transporter transmembrane region HPY16_06610 PF00005 ABC transporter HPY16_06615 PF09308 LuxQ, periplasmic HPY16_06615 PF00512 His Kinase A (phospho-acceptor) domain HPY16_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_06615 PF00072 Response regulator receiver domain HPY16_06630 PF00115 Cytochrome C and Quinol oxidase polypeptide I HPY16_06645 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HPY16_06645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY16_06655 PF00403 Heavy-metal-associated domain HPY16_06670 PF13545 Crp-like helix-turn-helix domain HPY16_06670 PF00027 Cyclic nucleotide-binding domain HPY16_06675 PF00582 Universal stress protein family HPY16_06680 PF01171 PP-loop family HPY16_06700 PF08402 TOBE domain HPY16_06700 PF00005 ABC transporter HPY16_06705 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_06710 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_06715 PF13416 Bacterial extracellular solute-binding protein HPY16_06720 PF13416 Bacterial extracellular solute-binding protein HPY16_06735 PF01235 Sodium:alanine symporter family HPY16_06740 PF01810 LysE type translocator HPY16_06770 PF16671 Actin cross-linking domain HPY16_06770 PF04717 Type VI secretion system, phage-baseplate injector HPY16_06775 PF05638 Type VI secretion system effector, Hcp HPY16_06780 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HPY16_06800 PF00270 DEAD/DEAH box helicase HPY16_06800 PF00271 Helicase conserved C-terminal domain HPY16_06805 PF00893 Small Multidrug Resistance protein HPY16_06810 PF00875 DNA photolyase HPY16_06810 PF03441 FAD binding domain of DNA photolyase HPY16_06815 PF07690 Major Facilitator Superfamily HPY16_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_06820 PF03466 LysR substrate binding domain HPY16_06830 PF01979 Amidohydrolase family HPY16_06835 PF10437 Bacterial lipoate protein ligase C-terminus HPY16_06835 PF03099 Biotin/lipoate A/B protein ligase family HPY16_06840 PF00012 Hsp70 protein HPY16_06850 PF00270 DEAD/DEAH box helicase HPY16_06850 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HPY16_06850 PF00271 Helicase conserved C-terminal domain HPY16_06850 PF04408 Helicase associated domain (HA2) HPY16_06850 PF11898 Domain of unknown function (DUF3418) HPY16_06870 PF00990 Diguanylate cyclase, GGDEF domain HPY16_06870 PF00563 EAL domain HPY16_06870 PF03707 Bacterial signalling protein N terminal repeat HPY16_06880 PF00012 Hsp70 protein HPY16_06885 PF00012 Hsp70 protein HPY16_06890 PF00990 Diguanylate cyclase, GGDEF domain HPY16_06890 PF17158 Membrane-associated sensor, integral membrane domain HPY16_06900 PF00990 Diguanylate cyclase, GGDEF domain HPY16_06900 PF03707 Bacterial signalling protein N terminal repeat HPY16_06900 PF00563 EAL domain HPY16_06920 PF06508 Queuosine biosynthesis protein QueC HPY16_06925 PF04055 Radical SAM superfamily HPY16_06935 PF10414 Sirohaem synthase dimerisation region HPY16_06935 PF14824 Sirohaem biosynthesis protein central HPY16_06935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY16_06940 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_06945 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_06950 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_06955 PF00005 ABC transporter HPY16_06960 PF01027 Inhibitor of apoptosis-promoting Bax1 HPY16_06965 PF04358 DsrC like protein HPY16_06970 PF00708 Acylphosphatase HPY16_06975 PF17785 PUA-like domain HPY16_06975 PF10672 S-adenosylmethionine-dependent methyltransferase HPY16_06980 PF00990 Diguanylate cyclase, GGDEF domain HPY16_06985 PF08534 Redoxin HPY16_06985 PF00462 Glutaredoxin HPY16_06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_06990 PF00072 Response regulator receiver domain HPY16_06990 PF00672 HAMP domain HPY16_06990 PF01627 Hpt domain HPY16_06990 PF00512 His Kinase A (phospho-acceptor) domain HPY16_06990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY16_06995 PF00072 Response regulator receiver domain HPY16_07000 PF14497 Glutathione S-transferase, C-terminal domain HPY16_07000 PF02798 Glutathione S-transferase, N-terminal domain HPY16_07010 PF04209 homogentisate 1,2-dioxygenase HPY16_07015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY16_07020 PF07687 Peptidase dimerisation domain HPY16_07020 PF01546 Peptidase family M20/M25/M40 HPY16_07035 PF13193 AMP-binding enzyme C-terminal domain HPY16_07035 PF00501 AMP-binding enzyme HPY16_07035 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY16_07040 PF04303 PrpF protein HPY16_07045 PF00330 Aconitase family (aconitate hydratase) HPY16_07045 PF00694 Aconitase C-terminal domain HPY16_07050 PF00285 Citrate synthase, C-terminal domain HPY16_07060 PF00392 Bacterial regulatory proteins, gntR family HPY16_07060 PF07729 FCD domain HPY16_07075 PF01970 Tripartite tricarboxylate transporter TctA family HPY16_07080 PF03466 LysR substrate binding domain HPY16_07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_07085 PF00593 TonB dependent receptor HPY16_07085 PF07715 TonB-dependent Receptor Plug Domain HPY16_07105 PF02653 Branched-chain amino acid transport system / permease component HPY16_07110 PF00005 ABC transporter HPY16_07115 PF13407 Periplasmic binding protein domain HPY16_07135 PF00486 Transcriptional regulatory protein, C terminal HPY16_07135 PF00072 Response regulator receiver domain HPY16_07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_07140 PF00512 His Kinase A (phospho-acceptor) domain HPY16_07140 PF00672 HAMP domain HPY16_07145 PF06629 MltA-interacting protein MipA HPY16_07150 PF04393 Protein of unknown function (DUF535) HPY16_07155 PF00158 Sigma-54 interaction domain HPY16_07155 PF00072 Response regulator receiver domain HPY16_07155 PF02954 Bacterial regulatory protein, Fis family HPY16_07160 PF00512 His Kinase A (phospho-acceptor) domain HPY16_07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_07160 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_07165 PF00939 Sodium:sulfate symporter transmembrane region HPY16_07170 PF00672 HAMP domain HPY16_07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_07175 PF01168 Alanine racemase, N-terminal domain HPY16_07175 PF00842 Alanine racemase, C-terminal domain HPY16_07180 PF00892 EamA-like transporter family HPY16_07190 PF13302 Acetyltransferase (GNAT) domain HPY16_07195 PF18024 Helix-turn-helix domain HPY16_07195 PF00158 Sigma-54 interaction domain HPY16_07200 PF05128 Domain of unknown function (DUF697) HPY16_07205 PF04317 YcjX-like family, DUF463 HPY16_07215 PF01797 Transposase IS200 like HPY16_07225 PF04715 Anthranilate synthase component I, N terminal region HPY16_07225 PF00425 chorismate binding enzyme HPY16_07230 PF00293 NUDIX domain HPY16_07235 PF03222 Tryptophan/tyrosine permease family HPY16_07240 PF03313 Serine dehydratase alpha chain HPY16_07240 PF03315 Serine dehydratase beta chain HPY16_07245 PF01242 6-pyruvoyl tetrahydropterin synthase HPY16_07250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_07250 PF12729 Four helix bundle sensory module for signal transduction HPY16_07250 PF00672 HAMP domain HPY16_07255 PF01336 OB-fold nucleic acid binding domain HPY16_07255 PF00152 tRNA synthetases class II (D, K and N) HPY16_07260 PF08543 Phosphomethylpyrimidine kinase HPY16_07260 PF02581 Thiamine monophosphate synthase HPY16_07265 PF00672 HAMP domain HPY16_07265 PF01966 HD domain HPY16_07270 PF00155 Aminotransferase class I and II HPY16_07285 PF00672 HAMP domain HPY16_07285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_07285 PF17200 Single Cache domain 2 HPY16_07290 PF04349 Periplasmic glucan biosynthesis protein, MdoG HPY16_07295 PF13506 Glycosyl transferase family 21 HPY16_07300 PF02028 BCCT, betaine/carnitine/choline family transporter HPY16_07305 PF01047 MarR family HPY16_07310 PF00072 Response regulator receiver domain HPY16_07310 PF00196 Bacterial regulatory proteins, luxR family HPY16_07315 PF07730 Histidine kinase HPY16_07315 PF17200 Single Cache domain 2 HPY16_07320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY16_07330 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY16_07345 PF00753 Metallo-beta-lactamase superfamily HPY16_07350 PF05951 Bacterial protein of unknown function (DUF882) HPY16_07380 PF00925 GTP cyclohydrolase II HPY16_07390 PF07690 Major Facilitator Superfamily HPY16_07405 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY16_07405 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY16_07415 PF00317 Ribonucleotide reductase, all-alpha domain HPY16_07415 PF03477 ATP cone domain HPY16_07415 PF02867 Ribonucleotide reductase, barrel domain HPY16_07420 PF00268 Ribonucleotide reductase, small chain HPY16_07425 PF00175 Oxidoreductase NAD-binding domain HPY16_07425 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY16_07425 PF00970 Oxidoreductase FAD-binding domain HPY16_07435 PF00994 Probable molybdopterin binding domain HPY16_07450 PF00672 HAMP domain HPY16_07450 PF17200 Single Cache domain 2 HPY16_07450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_07465 PF00005 ABC transporter HPY16_07470 PF01032 FecCD transport family HPY16_07475 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HPY16_07485 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HPY16_07495 PF02277 Phosphoribosyltransferase HPY16_07500 PF01641 SelR domain HPY16_07510 PF08411 Exonuclease C-terminal HPY16_07510 PF00929 Exonuclease HPY16_07515 PF03788 LrgA family HPY16_07520 PF04172 LrgB-like family HPY16_07525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY16_07525 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HPY16_07535 PF02222 ATP-grasp domain HPY16_07540 PF05724 Thiopurine S-methyltransferase (TPMT) HPY16_07550 PF00216 Bacterial DNA-binding protein HPY16_07555 PF03147 Ferredoxin-fold anticodon binding domain HPY16_07555 PF01588 Putative tRNA binding domain HPY16_07555 PF03483 B3/4 domain HPY16_07555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPY16_07555 PF03484 tRNA synthetase B5 domain HPY16_07560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HPY16_07560 PF01409 tRNA synthetases class II core domain (F) HPY16_07570 PF00072 Response regulator receiver domain HPY16_07570 PF00990 Diguanylate cyclase, GGDEF domain HPY16_07595 PF01066 CDP-alcohol phosphatidyltransferase HPY16_07600 PF08459 UvrC Helix-hairpin-helix N-terminal HPY16_07600 PF02151 UvrB/uvrC motif HPY16_07600 PF01541 GIY-YIG catalytic domain HPY16_07605 PF00196 Bacterial regulatory proteins, luxR family HPY16_07605 PF00072 Response regulator receiver domain HPY16_07610 PF03104 DNA polymerase family B, exonuclease domain HPY16_07610 PF00136 DNA polymerase family B HPY16_07615 PF00563 EAL domain HPY16_07615 PF00990 Diguanylate cyclase, GGDEF domain HPY16_07615 PF13426 PAS domain HPY16_07625 PF01132 Elongation factor P (EF-P) OB domain HPY16_07625 PF08207 Elongation factor P (EF-P) KOW-like domain HPY16_07625 PF09285 Elongation factor P, C-terminal HPY16_07630 PF04269 Protein of unknown function, DUF440 HPY16_07640 PF00392 Bacterial regulatory proteins, gntR family HPY16_07640 PF07702 UTRA domain HPY16_07645 PF01979 Amidohydrolase family HPY16_07650 PF00491 Arginase family HPY16_07655 PF01175 Urocanase Rossmann-like domain HPY16_07655 PF17392 Urocanase C-terminal domain HPY16_07655 PF17391 Urocanase N-terminal domain HPY16_07660 PF00221 Aromatic amino acid lyase HPY16_07670 PF00089 Trypsin HPY16_07675 PF04191 Phospholipid methyltransferase HPY16_07680 PF13183 4Fe-4S dicluster domain HPY16_07680 PF01565 FAD binding domain HPY16_07680 PF02913 FAD linked oxidases, C-terminal domain HPY16_07695 PF00691 OmpA family HPY16_07695 PF13488 Glycine zipper HPY16_07715 PF01259 SAICAR synthetase HPY16_07725 PF00390 Malic enzyme, N-terminal domain HPY16_07725 PF03949 Malic enzyme, NAD binding domain HPY16_07735 PF02698 DUF218 domain HPY16_07740 PF00990 Diguanylate cyclase, GGDEF domain HPY16_07740 PF08448 PAS fold HPY16_07745 PF00266 Aminotransferase class-V HPY16_07755 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_07760 PF00005 ABC transporter HPY16_07760 PF00664 ABC transporter transmembrane region HPY16_07765 PF00005 ABC transporter HPY16_07765 PF00664 ABC transporter transmembrane region HPY16_07770 PF01479 S4 domain HPY16_07770 PF00849 RNA pseudouridylate synthase HPY16_07775 PF01300 Telomere recombination HPY16_07780 PF02811 PHP domain HPY16_07785 PF08056 Tryptophan operon leader peptide HPY16_07790 PF00425 chorismate binding enzyme HPY16_07790 PF04715 Anthranilate synthase component I, N terminal region HPY16_07795 PF00117 Glutamine amidotransferase class-I HPY16_07800 PF02885 Glycosyl transferase family, helical bundle domain HPY16_07800 PF00591 Glycosyl transferase family, a/b domain HPY16_07805 PF00218 Indole-3-glycerol phosphate synthase HPY16_07805 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HPY16_07810 PF00291 Pyridoxal-phosphate dependent enzyme HPY16_07815 PF00290 Tryptophan synthase alpha chain HPY16_07820 PF00375 Sodium:dicarboxylate symporter family HPY16_07825 PF00265 Thymidine kinase HPY16_07830 PF02938 GAD domain HPY16_07830 PF00152 tRNA synthetases class II (D, K and N) HPY16_07830 PF01336 OB-fold nucleic acid binding domain HPY16_07835 PF01904 Protein of unknown function DUF72 HPY16_07840 PF13649 Methyltransferase domain HPY16_07845 PF08003 Protein of unknown function (DUF1698) HPY16_07850 PF18030 RimK PreATP-grasp domain HPY16_07850 PF08443 RimK-like ATP-grasp domain HPY16_07865 PF00266 Aminotransferase class-V HPY16_07875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_07875 PF00989 PAS fold HPY16_07875 PF00512 His Kinase A (phospho-acceptor) domain HPY16_07890 PF04994 TfoX C-terminal domain HPY16_07890 PF04993 TfoX N-terminal domain HPY16_07900 PF03956 Lysine exporter LysO HPY16_07910 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY16_07915 PF01418 Helix-turn-helix domain, rpiR family HPY16_07915 PF01380 SIS domain HPY16_07920 PF00171 Aldehyde dehydrogenase family HPY16_07920 PF00465 Iron-containing alcohol dehydrogenase HPY16_07925 PF00462 Glutaredoxin HPY16_07930 PF02080 TrkA-C domain HPY16_07930 PF06826 Predicted Permease Membrane Region HPY16_07935 PF10431 C-terminal, D2-small domain, of ClpB protein HPY16_07935 PF02861 Clp amino terminal domain, pathogenicity island component HPY16_07935 PF17871 AAA lid domain HPY16_07935 PF00004 ATPase family associated with various cellular activities (AAA) HPY16_07935 PF07724 AAA domain (Cdc48 subfamily) HPY16_07940 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPY16_07945 PF00313 'Cold-shock' DNA-binding domain HPY16_07950 PF03971 Monomeric isocitrate dehydrogenase HPY16_07955 PF00849 RNA pseudouridylate synthase HPY16_07960 PF01502 Phosphoribosyl-AMP cyclohydrolase HPY16_07960 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HPY16_07965 PF00977 Histidine biosynthesis protein HPY16_07970 PF00977 Histidine biosynthesis protein HPY16_07975 PF00117 Glutamine amidotransferase class-I HPY16_07980 PF08645 Polynucleotide kinase 3 phosphatase HPY16_07980 PF00475 Imidazoleglycerol-phosphate dehydratase HPY16_07985 PF00155 Aminotransferase class I and II HPY16_07990 PF00815 Histidinol dehydrogenase HPY16_07995 PF01634 ATP phosphoribosyltransferase HPY16_07995 PF08029 HisG, C-terminal domain HPY16_08000 PF03553 Na+/H+ antiporter family HPY16_08005 PF00816 H-NS histone family HPY16_08010 PF00294 pfkB family carbohydrate kinase HPY16_08020 PF04356 Protein of unknown function (DUF489) HPY16_08025 PF08328 Adenylosuccinate lyase C-terminal HPY16_08025 PF00206 Lyase HPY16_08035 PF16036 Chalcone isomerase-like HPY16_08060 PF00106 short chain dehydrogenase HPY16_08070 PF01435 Peptidase family M48 HPY16_08085 PF08241 Methyltransferase domain HPY16_08090 PF00155 Aminotransferase class I and II HPY16_08095 PF04055 Radical SAM superfamily HPY16_08095 PF06968 Biotin and Thiamin Synthesis associated domain HPY16_08100 PF00202 Aminotransferase class-III HPY16_08105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY16_08105 PF02403 Seryl-tRNA synthetase N-terminal domain HPY16_08110 PF12002 MgsA AAA+ ATPase C terminal HPY16_08110 PF16193 AAA C-terminal domain HPY16_08110 PF00004 ATPase family associated with various cellular activities (AAA) HPY16_08115 PF03548 Outer membrane lipoprotein carrier protein LolA HPY16_08120 PF07517 SecA DEAD-like domain HPY16_08120 PF02810 SEC-C motif HPY16_08120 PF01043 SecA preprotein cross-linking domain HPY16_08120 PF07516 SecA Wing and Scaffold domain HPY16_08125 PF01207 Dihydrouridine synthase (Dus) HPY16_08130 PF00990 Diguanylate cyclase, GGDEF domain HPY16_08130 PF05230 MASE2 domain HPY16_08135 PF00005 ABC transporter HPY16_08140 PF02653 Branched-chain amino acid transport system / permease component HPY16_08150 PF09905 DNA-binding protein VF530 HPY16_08155 PF04217 Protein of unknown function, DUF412 HPY16_08160 PF00871 Acetokinase family HPY16_08165 PF07085 DRTGG domain HPY16_08165 PF01515 Phosphate acetyl/butaryl transferase HPY16_08170 PF13409 Glutathione S-transferase, N-terminal domain HPY16_08175 PF00005 ABC transporter HPY16_08175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_08180 PF00005 ABC transporter HPY16_08180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_08185 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY16_08185 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_08190 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_08195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY16_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_08205 PF00072 Response regulator receiver domain HPY16_08205 PF08448 PAS fold HPY16_08205 PF00512 His Kinase A (phospho-acceptor) domain HPY16_08205 PF13188 PAS domain HPY16_08210 PF02954 Bacterial regulatory protein, Fis family HPY16_08210 PF00072 Response regulator receiver domain HPY16_08210 PF00158 Sigma-54 interaction domain HPY16_08215 PF03707 Bacterial signalling protein N terminal repeat HPY16_08215 PF13188 PAS domain HPY16_08215 PF00563 EAL domain HPY16_08215 PF00990 Diguanylate cyclase, GGDEF domain HPY16_08220 PF00512 His Kinase A (phospho-acceptor) domain HPY16_08220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_08225 PF00512 His Kinase A (phospho-acceptor) domain HPY16_08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_08225 PF00989 PAS fold HPY16_08225 PF13426 PAS domain HPY16_08225 PF13188 PAS domain HPY16_08235 PF00072 Response regulator receiver domain HPY16_08250 PF03481 Putative GTP-binding controlling metal-binding HPY16_08250 PF01300 Telomere recombination HPY16_08265 PF01161 Phosphatidylethanolamine-binding protein HPY16_08275 PF06483 Chitinase C HPY16_08275 PF00704 Glycosyl hydrolases family 18 HPY16_08290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY16_08290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY16_08295 PF01022 Bacterial regulatory protein, arsR family HPY16_08305 PF08448 PAS fold HPY16_08305 PF00990 Diguanylate cyclase, GGDEF domain HPY16_08315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY16_08330 PF01037 Lrp/AsnC ligand binding domain HPY16_08330 PF13404 AsnC-type helix-turn-helix domain HPY16_08335 PF00291 Pyridoxal-phosphate dependent enzyme HPY16_08340 PF01343 Peptidase family S49 HPY16_08340 PF08496 Peptidase family S49 N-terminal HPY16_08345 PF00106 short chain dehydrogenase HPY16_08350 PF03692 Putative zinc- or iron-chelating domain HPY16_08355 PF03692 Putative zinc- or iron-chelating domain HPY16_08360 PF13662 Toprim domain HPY16_08360 PF02132 RecR protein HPY16_08365 PF02575 YbaB/EbfC DNA-binding family HPY16_08370 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HPY16_08370 PF12169 DNA polymerase III subunits gamma and tau domain III HPY16_08370 PF12170 DNA polymerase III tau subunit V interacting with alpha HPY16_08375 PF00156 Phosphoribosyl transferase domain HPY16_08380 PF04304 Protein of unknown function (DUF454) HPY16_08385 PF00072 Response regulator receiver domain HPY16_08390 PF03466 LysR substrate binding domain HPY16_08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_08395 PF00881 Nitroreductase family HPY16_08400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY16_08400 PF00378 Enoyl-CoA hydratase/isomerase HPY16_08400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY16_08405 PF00108 Thiolase, N-terminal domain HPY16_08405 PF02803 Thiolase, C-terminal domain HPY16_08410 PF04542 Sigma-70 region 2 HPY16_08410 PF08281 Sigma-70, region 4 HPY16_08420 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY16_08425 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY16_08430 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY16_08435 PF12557 Cob(I)alamin adenosyltransferase N terminal HPY16_08435 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HPY16_08440 PF05170 AsmA family HPY16_08445 PF00485 Phosphoribulokinase / Uridine kinase family HPY16_08450 PF10609 NUBPL iron-transfer P-loop NTPase HPY16_08455 PF09334 tRNA synthetases class I (M) HPY16_08455 PF01588 Putative tRNA binding domain HPY16_08465 PF01048 Phosphorylase superfamily HPY16_08470 PF00403 Heavy-metal-associated domain HPY16_08475 PF00571 CBS domain HPY16_08475 PF01743 Poly A polymerase head domain HPY16_08480 PF00990 Diguanylate cyclase, GGDEF domain HPY16_08480 PF07694 5TMR of 5TMR-LYT HPY16_08485 PF02391 MoaE protein HPY16_08490 PF02597 ThiS family HPY16_08495 PF01967 MoaC family HPY16_08500 PF00994 Probable molybdopterin binding domain HPY16_08505 PF04055 Radical SAM superfamily HPY16_08505 PF06463 Molybdenum Cofactor Synthesis C HPY16_08510 PF01933 Uncharacterised protein family UPF0052 HPY16_08515 PF01627 Hpt domain HPY16_08520 PF02954 Bacterial regulatory protein, Fis family HPY16_08520 PF00072 Response regulator receiver domain HPY16_08520 PF00158 Sigma-54 interaction domain HPY16_08525 PF17757 UvrB interaction domain HPY16_08525 PF12344 Ultra-violet resistance protein B HPY16_08525 PF02151 UvrB/uvrC motif HPY16_08525 PF00271 Helicase conserved C-terminal domain HPY16_08525 PF04851 Type III restriction enzyme, res subunit HPY16_08535 PF02508 Rnf-Nqr subunit, membrane protein HPY16_08540 PF04060 Putative Fe-S cluster HPY16_08545 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HPY16_08545 PF12838 4Fe-4S dicluster domain HPY16_08545 PF13375 RnfC Barrel sandwich hybrid domain HPY16_08545 PF10531 SLBB domain HPY16_08550 PF03116 NQR2, RnfD, RnfE family HPY16_08555 PF04205 FMN-binding domain HPY16_08560 PF02508 Rnf-Nqr subunit, membrane protein HPY16_08565 PF00633 Helix-hairpin-helix motif HPY16_08565 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY16_08565 PF10576 Iron-sulfur binding domain of endonuclease III HPY16_08570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY16_08575 PF10952 Protein of unknown function (DUF2753) HPY16_08580 PF00691 OmpA family HPY16_08580 PF18393 MotY N-terminal domain HPY16_08585 PF00929 Exonuclease HPY16_08590 PF13726 Na+-H+ antiporter family HPY16_08590 PF03553 Na+/H+ antiporter family HPY16_08595 PF01797 Transposase IS200 like HPY16_08600 PF00156 Phosphoribosyl transferase domain HPY16_08605 PF02674 Colicin V production protein HPY16_08610 PF05036 Sporulation related domain HPY16_08615 PF08245 Mur ligase middle domain HPY16_08615 PF02875 Mur ligase family, glutamate ligase domain HPY16_08620 PF01039 Carboxyl transferase domain HPY16_08620 PF17848 Acetyl-coA carboxylase zinc finger domain HPY16_08625 PF01416 tRNA pseudouridine synthase HPY16_08635 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY16_08635 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HPY16_08640 PF00367 phosphotransferase system, EIIB HPY16_08640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY16_08640 PF02378 Phosphotransferase system, EIIC HPY16_08645 PF01979 Amidohydrolase family HPY16_08650 PF01047 MarR family HPY16_08650 PF00480 ROK family HPY16_08655 PF02254 TrkA-N domain HPY16_08655 PF00999 Sodium/hydrogen exchanger family HPY16_08660 PF00733 Asparagine synthase HPY16_08660 PF13537 Glutamine amidotransferase domain HPY16_08665 PF02357 Transcription termination factor nusG HPY16_08670 PF00854 POT family HPY16_08675 PF00762 Ferrochelatase HPY16_08680 PF05191 Adenylate kinase, active site lid HPY16_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_08685 PF00183 Hsp90 protein HPY16_08690 PF00486 Transcriptional regulatory protein, C terminal HPY16_08695 PF17323 Trans-membrane regulatory protein ToxS HPY16_08705 PF12850 Calcineurin-like phosphoesterase superfamily domain HPY16_08710 PF08338 Domain of unknown function (DUF1731) HPY16_08710 PF01370 NAD dependent epimerase/dehydratase family HPY16_08715 PF00106 short chain dehydrogenase HPY16_08720 PF00085 Thioredoxin HPY16_08725 PF01145 SPFH domain / Band 7 family HPY16_08725 PF16200 C-terminal region of band_7 HPY16_08730 PF01957 NfeD-like C-terminal, partner-binding HPY16_08735 PF13411 MerR HTH family regulatory protein HPY16_08745 PF13609 Gram-negative porin HPY16_08750 PF00533 BRCA1 C Terminus (BRCT) domain HPY16_08750 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HPY16_08750 PF12826 Helix-hairpin-helix motif HPY16_08750 PF03120 NAD-dependent DNA ligase OB-fold domain HPY16_08750 PF01653 NAD-dependent DNA ligase adenylation domain HPY16_08755 PF04354 ZipA, C-terminal FtsZ-binding domain HPY16_08765 PF00291 Pyridoxal-phosphate dependent enzyme HPY16_08770 PF00381 PTS HPr component phosphorylation site HPY16_08775 PF02896 PEP-utilising enzyme, TIM barrel domain HPY16_08775 PF05524 PEP-utilising enzyme, N-terminal HPY16_08775 PF00391 PEP-utilising enzyme, mobile domain HPY16_08780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY16_08785 PF01494 FAD binding domain HPY16_08790 PF01938 TRAM domain HPY16_08790 PF00919 Uncharacterized protein family UPF0004 HPY16_08790 PF04055 Radical SAM superfamily HPY16_08795 PF02562 PhoH-like protein HPY16_08800 PF02130 Uncharacterized protein family UPF0054 HPY16_08805 PF03471 Transporter associated domain HPY16_08805 PF00571 CBS domain HPY16_08810 PF00795 Carbon-nitrogen hydrolase HPY16_08815 PF07295 Zinc-ribbon containing domain HPY16_08820 PF08264 Anticodon-binding domain of tRNA HPY16_08820 PF00133 tRNA synthetases class I (I, L, M and V) HPY16_08820 PF13603 Leucyl-tRNA synthetase, Domain 2 HPY16_08825 PF04390 Lipopolysaccharide-assembly HPY16_08830 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HPY16_08830 PF06144 DNA polymerase III, delta subunit HPY16_08840 PF02590 Predicted SPOUT methyltransferase HPY16_08845 PF00905 Penicillin binding protein transpeptidase domain HPY16_08845 PF03717 Penicillin-binding Protein dimerisation domain HPY16_08850 PF01098 Cell cycle protein HPY16_08855 PF03330 Lytic transglycolase HPY16_08855 PF05036 Sporulation related domain HPY16_08860 PF00768 D-alanyl-D-alanine carboxypeptidase HPY16_08860 PF07943 Penicillin-binding protein 5, C-terminal domain HPY16_08865 PF04359 Protein of unknown function (DUF493) HPY16_08870 PF03099 Biotin/lipoate A/B protein ligase family HPY16_08875 PF04055 Radical SAM superfamily HPY16_08875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HPY16_08885 PF00464 Serine hydroxymethyltransferase HPY16_08910 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY16_08910 PF10531 SLBB domain HPY16_08910 PF02563 Polysaccharide biosynthesis/export protein HPY16_08920 PF02397 Bacterial sugar transferase HPY16_08935 PF12561 ToxR activated gene A lipoprotein domain HPY16_08935 PF17945 Beta/Gamma crystallin HPY16_08950 PF03808 Glycosyl transferase WecB/TagA/CpsF family HPY16_08960 PF00862 Sucrose synthase HPY16_08960 PF00534 Glycosyl transferases group 1 HPY16_08970 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_08990 PF12464 Maltose acetyltransferase HPY16_08990 PF14602 Hexapeptide repeat of succinyl-transferase HPY16_08995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY16_08995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY16_08995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY16_09000 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY16_09005 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY16_09010 PF00873 AcrB/AcrD/AcrF family HPY16_09015 PF13533 Biotin-lipoyl like HPY16_09040 PF16657 Maltogenic Amylase, C-terminal domain HPY16_09040 PF00128 Alpha amylase, catalytic domain HPY16_09045 PF00367 phosphotransferase system, EIIB HPY16_09045 PF02378 Phosphotransferase system, EIIC HPY16_09050 PF00356 Bacterial regulatory proteins, lacI family HPY16_09060 PF00005 ABC transporter HPY16_09060 PF09383 NIL domain HPY16_09065 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_09070 PF03180 NLPA lipoprotein HPY16_09075 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HPY16_09080 PF07348 Syd protein (SUKH-2) HPY16_09085 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HPY16_09085 PF14489 QueF-like protein HPY16_09095 PF00990 Diguanylate cyclase, GGDEF domain HPY16_09100 PF11892 Domain of unknown function (DUF3412) HPY16_09100 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HPY16_09100 PF03641 Possible lysine decarboxylase HPY16_09105 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY16_09105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY16_09110 PF04241 Protein of unknown function (DUF423) HPY16_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_09115 PF03466 LysR substrate binding domain HPY16_09120 PF02926 THUMP domain HPY16_09120 PF02568 Thiamine biosynthesis protein (ThiI) HPY16_09125 PF00691 OmpA family HPY16_09125 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPY16_09130 PF01618 MotA/TolQ/ExbB proton channel family HPY16_09135 PF02609 Exonuclease VII small subunit HPY16_09140 PF00348 Polyprenyl synthetase HPY16_09145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPY16_09145 PF02780 Transketolase, C-terminal domain HPY16_09145 PF02779 Transketolase, pyrimidine binding domain HPY16_09150 PF00849 RNA pseudouridylate synthase HPY16_09155 PF04287 tRNA pseudouridine synthase C HPY16_09170 PF13302 Acetyltransferase (GNAT) domain HPY16_09180 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HPY16_09185 PF03806 AbgT putative transporter family HPY16_09190 PF00444 Ribosomal protein L36 HPY16_09195 PF01197 Ribosomal protein L31 HPY16_09200 PF01980 tRNA-methyltransferase O HPY16_09200 PF18389 TrmO C-terminal domain HPY16_09205 PF03129 Anticodon binding domain HPY16_09205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY16_09205 PF04073 Aminoacyl-tRNA editing domain HPY16_09215 PF06786 Uncharacterised protein family (UPF0253) HPY16_09225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HPY16_09225 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HPY16_09225 PF02769 AIR synthase related protein, C-terminal domain HPY16_09235 PF01464 Transglycosylase SLT domain HPY16_09235 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_09240 PF14437 MafB19-like deaminase HPY16_09245 PF03806 AbgT putative transporter family HPY16_09270 PF00114 Pilin (bacterial filament) HPY16_09270 PF07963 Prokaryotic N-terminal methylation motif HPY16_09275 PF00684 DnaJ central domain HPY16_09275 PF01556 DnaJ C terminal domain HPY16_09275 PF00226 DnaJ domain HPY16_09280 PF00012 Hsp70 protein HPY16_09285 PF01025 GrpE HPY16_09290 PF01513 ATP-NAD kinase HPY16_09295 PF02463 RecF/RecN/SMC N terminal domain HPY16_09300 PF04355 SmpA / OmlA family HPY16_09305 PF03658 RnfH family Ubiquitin HPY16_09310 PF03364 Polyketide cyclase / dehydrase and lipid transport HPY16_09315 PF01668 SmpB protein HPY16_09400 PF00037 4Fe-4S binding domain HPY16_09400 PF11953 Domain of unknown function (DUF3470) HPY16_09405 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY16_09405 PF00588 SpoU rRNA Methylase family HPY16_09415 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HPY16_09420 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HPY16_09425 PF04223 Citrate lyase, alpha subunit (CitF) HPY16_09430 PF03328 HpcH/HpaI aldolase/citrate lyase family HPY16_09435 PF06857 Malonate decarboxylase delta subunit (MdcD) HPY16_09440 PF08218 Citrate lyase ligase C-terminal domain HPY16_09445 PF03390 2-hydroxycarboxylate transporter family HPY16_09450 PF04277 Oxaloacetate decarboxylase, gamma chain HPY16_09455 PF02436 Conserved carboxylase domain HPY16_09455 PF00364 Biotin-requiring enzyme HPY16_09455 PF00682 HMGL-like HPY16_09460 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY16_09465 PF17203 Single cache domain 3 HPY16_09465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_09470 PF12431 Transcriptional regulator HPY16_09470 PF00072 Response regulator receiver domain HPY16_09495 PF01266 FAD dependent oxidoreductase HPY16_09500 PF01235 Sodium:alanine symporter family HPY16_09505 PF14864 Alkyl sulfatase C-terminal HPY16_09505 PF00753 Metallo-beta-lactamase superfamily HPY16_09505 PF14863 Alkyl sulfatase dimerisation HPY16_09510 PF03466 LysR substrate binding domain HPY16_09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_09515 PF01648 4'-phosphopantetheinyl transferase superfamily HPY16_09515 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HPY16_09520 PF00005 ABC transporter HPY16_09525 PF01032 FecCD transport family HPY16_09530 PF01032 FecCD transport family HPY16_09535 PF01497 Periplasmic binding protein HPY16_09550 PF00425 chorismate binding enzyme HPY16_09555 PF13193 AMP-binding enzyme C-terminal domain HPY16_09555 PF00501 AMP-binding enzyme HPY16_09560 PF00857 Isochorismatase family HPY16_09560 PF00550 Phosphopantetheine attachment site HPY16_09565 PF01184 GPR1/FUN34/yaaH family HPY16_09570 PF06483 Chitinase C HPY16_09570 PF00704 Glycosyl hydrolases family 18 HPY16_09575 PF01510 N-acetylmuramoyl-L-alanine amidase HPY16_09580 PF05199 GMC oxidoreductase HPY16_09580 PF00732 GMC oxidoreductase HPY16_09585 PF02540 NAD synthase HPY16_09585 PF00958 GMP synthase C terminal domain HPY16_09585 PF00117 Glutamine amidotransferase class-I HPY16_09590 PF00478 IMP dehydrogenase / GMP reductase domain HPY16_09590 PF00571 CBS domain HPY16_09595 PF02601 Exonuclease VII, large subunit HPY16_09595 PF13742 OB-fold nucleic acid binding domain HPY16_09610 PF01926 50S ribosome-binding GTPase HPY16_09610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPY16_09615 PF13360 PQQ-like domain HPY16_09620 PF09976 Tetratricopeptide repeat-like domain HPY16_09625 PF13393 Histidyl-tRNA synthetase HPY16_09625 PF03129 Anticodon binding domain HPY16_09630 PF04551 GcpE protein HPY16_09635 PF13464 Domain of unknown function (DUF4115) HPY16_09640 PF04055 Radical SAM superfamily HPY16_09645 PF00334 Nucleoside diphosphate kinase HPY16_09650 PF00883 Cytosol aminopeptidase family, catalytic domain HPY16_09650 PF12404 Peptidase HPY16_09655 PF04384 Iron-sulphur cluster assembly HPY16_09660 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY16_09665 PF00012 Hsp70 protein HPY16_09670 PF00226 DnaJ domain HPY16_09670 PF07743 HSCB C-terminal oligomerisation domain HPY16_09675 PF01521 Iron-sulphur cluster biosynthesis HPY16_09680 PF01592 NifU-like N terminal domain HPY16_09685 PF00266 Aminotransferase class-V HPY16_09690 PF02082 Transcriptional regulator HPY16_09695 PF00588 SpoU rRNA Methylase family HPY16_09700 PF00459 Inositol monophosphatase family HPY16_09705 PF02355 Protein export membrane protein HPY16_09705 PF07549 SecD/SecF GG Motif HPY16_09710 PF13721 SecD export protein N-terminal TM region HPY16_09710 PF07549 SecD/SecF GG Motif HPY16_09710 PF02355 Protein export membrane protein HPY16_09715 PF02699 Preprotein translocase subunit HPY16_09720 PF01702 Queuine tRNA-ribosyltransferase HPY16_09725 PF02547 Queuosine biosynthesis protein HPY16_09730 PF00571 CBS domain HPY16_09735 PF00463 Isocitrate lyase family HPY16_09740 PF01274 Malate synthase HPY16_09745 PF03466 LysR substrate binding domain HPY16_09745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_09750 PF10417 C-terminal domain of 1-Cys peroxiredoxin HPY16_09750 PF00578 AhpC/TSA family HPY16_09755 PF03932 CutC family HPY16_09760 PF03976 Polyphosphate kinase 2 (PPK2) HPY16_09765 PF01895 PhoU domain HPY16_09770 PF00005 ABC transporter HPY16_09775 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_09780 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_09785 PF02503 Polyphosphate kinase middle domain HPY16_09785 PF13089 Polyphosphate kinase N-terminal domain HPY16_09785 PF13090 Polyphosphate kinase C-terminal domain 2 HPY16_09785 PF17941 Polyphosphate kinase C-terminal domain 1 HPY16_09790 PF02541 Ppx/GppA phosphatase family HPY16_09795 PF12849 PBP superfamily domain HPY16_09800 PF11808 Phosphate regulon sensor protein PhoR HPY16_09800 PF00989 PAS fold HPY16_09800 PF00512 His Kinase A (phospho-acceptor) domain HPY16_09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_09805 PF00072 Response regulator receiver domain HPY16_09805 PF00486 Transcriptional regulatory protein, C terminal HPY16_09810 PF04381 Putative exonuclease, RdgC HPY16_09820 PF00037 4Fe-4S binding domain HPY16_09825 PF00881 Nitroreductase family HPY16_09865 PF17871 AAA lid domain HPY16_09865 PF02861 Clp amino terminal domain, pathogenicity island component HPY16_09865 PF10431 C-terminal, D2-small domain, of ClpB protein HPY16_09865 PF00004 ATPase family associated with various cellular activities (AAA) HPY16_09865 PF07724 AAA domain (Cdc48 subfamily) HPY16_09875 PF01479 S4 domain HPY16_09875 PF00849 RNA pseudouridylate synthase HPY16_09880 PF13525 Outer membrane lipoprotein HPY16_09885 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY16_09890 PF01817 Chorismate mutase type II HPY16_09890 PF00800 Prephenate dehydratase HPY16_09895 PF13416 Bacterial extracellular solute-binding protein HPY16_09900 PF00990 Diguanylate cyclase, GGDEF domain HPY16_09900 PF00563 EAL domain HPY16_09905 PF01931 Protein of unknown function DUF84 HPY16_09910 PF01371 Trp repressor protein HPY16_09915 PF01464 Transglycosylase SLT domain HPY16_09915 PF14718 Soluble lytic murein transglycosylase L domain HPY16_09920 PF12848 ABC transporter HPY16_09920 PF00005 ABC transporter HPY16_09925 PF07238 PilZ domain HPY16_09930 PF02153 Prephenate dehydrogenase HPY16_09930 PF01817 Chorismate mutase type II HPY16_09935 PF00793 DAHP synthetase I family HPY16_09940 PF07694 5TMR of 5TMR-LYT HPY16_09940 PF06580 Histidine kinase HPY16_09945 PF04397 LytTr DNA-binding domain HPY16_09945 PF00072 Response regulator receiver domain HPY16_09950 PF00933 Glycosyl hydrolase family 3 N terminal domain HPY16_09955 PF03702 Anhydro-N-acetylmuramic acid kinase HPY16_09960 PF13580 SIS domain HPY16_09970 PF02554 Carbon starvation protein CstA HPY16_09975 PF02401 LytB protein HPY16_09980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY16_09985 PF01252 Signal peptidase (SPase) II HPY16_09990 PF06827 Zinc finger found in FPG and IleRS HPY16_09990 PF00133 tRNA synthetases class I (I, L, M and V) HPY16_09990 PF08264 Anticodon-binding domain of tRNA HPY16_09995 PF06574 FAD synthetase HPY16_09995 PF01687 Riboflavin kinase HPY16_10000 PF03023 Lipid II flippase MurJ HPY16_10005 PF01649 Ribosomal protein S20 HPY16_10010 PF01022 Bacterial regulatory protein, arsR family HPY16_10015 PF03466 LysR substrate binding domain HPY16_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_10020 PF02690 Na+/Pi-cotransporter HPY16_10025 PF00303 Thymidylate synthase HPY16_10030 PF01790 Prolipoprotein diacylglyceryl transferase HPY16_10035 PF01925 Sulfite exporter TauE/SafE HPY16_10040 PF02896 PEP-utilising enzyme, TIM barrel domain HPY16_10040 PF01590 GAF domain HPY16_10040 PF05524 PEP-utilising enzyme, N-terminal HPY16_10040 PF00391 PEP-utilising enzyme, mobile domain HPY16_10045 PF00293 NUDIX domain HPY16_10050 PF02976 DNA mismatch repair enzyme MutH HPY16_10055 PF00248 Aldo/keto reductase family HPY16_10065 PF00158 Sigma-54 interaction domain HPY16_10065 PF00072 Response regulator receiver domain HPY16_10065 PF02954 Bacterial regulatory protein, Fis family HPY16_10070 PF01336 OB-fold nucleic acid binding domain HPY16_10070 PF00152 tRNA synthetases class II (D, K and N) HPY16_10080 PF05525 Branched-chain amino acid transport protein HPY16_10085 PF05175 Methyltransferase small domain HPY16_10090 PF00270 DEAD/DEAH box helicase HPY16_10090 PF00271 Helicase conserved C-terminal domain HPY16_10095 PF00009 Elongation factor Tu GTP binding domain HPY16_10095 PF03144 Elongation factor Tu domain 2 HPY16_10095 PF16658 Class II release factor RF3, C-terminal domain HPY16_10100 PF00990 Diguanylate cyclase, GGDEF domain HPY16_10100 PF00563 EAL domain HPY16_10100 PF03707 Bacterial signalling protein N terminal repeat HPY16_10115 PF13508 Acetyltransferase (GNAT) domain HPY16_10120 PF02036 SCP-2 sterol transfer family HPY16_10125 PF00990 Diguanylate cyclase, GGDEF domain HPY16_10125 PF00563 EAL domain HPY16_10125 PF03707 Bacterial signalling protein N terminal repeat HPY16_10130 PF01136 Peptidase family U32 HPY16_10135 PF01136 Peptidase family U32 HPY16_10150 PF13181 Tetratricopeptide repeat HPY16_10150 PF07719 Tetratricopeptide repeat HPY16_10155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HPY16_10155 PF01138 3' exoribonuclease family, domain 1 HPY16_10155 PF03725 3' exoribonuclease family, domain 2 HPY16_10155 PF00575 S1 RNA binding domain HPY16_10155 PF00013 KH domain HPY16_10160 PF00312 Ribosomal protein S15 HPY16_10165 PF16198 tRNA pseudouridylate synthase B C-terminal domain HPY16_10165 PF01509 TruB family pseudouridylate synthase (N terminal domain) HPY16_10165 PF09157 Pseudouridine synthase II TruB, C-terminal HPY16_10170 PF02033 Ribosome-binding factor A HPY16_10175 PF04760 Translation initiation factor IF-2, N-terminal region HPY16_10175 PF08364 Bacterial translation initiation factor IF-2 associated region HPY16_10175 PF00009 Elongation factor Tu GTP binding domain HPY16_10175 PF11987 Translation-initiation factor 2 HPY16_10180 PF13184 NusA-like KH domain HPY16_10180 PF08529 NusA N-terminal domain HPY16_10180 PF00575 S1 RNA binding domain HPY16_10185 PF02576 RimP N-terminal domain HPY16_10185 PF17384 RimP C-terminal SH3 domain HPY16_10200 PF03840 Preprotein translocase SecG subunit HPY16_10205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY16_10205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY16_10205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY16_10205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY16_10210 PF00809 Pterin binding enzyme HPY16_10215 PF01434 Peptidase family M41 HPY16_10215 PF17862 AAA+ lid domain HPY16_10215 PF00004 ATPase family associated with various cellular activities (AAA) HPY16_10215 PF06480 FtsH Extracellular HPY16_10220 PF01728 FtsJ-like methyltransferase HPY16_10225 PF01985 CRS1 / YhbY (CRM) domain HPY16_10230 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY16_10230 PF03449 Transcription elongation factor, N-terminal HPY16_10235 PF13609 Gram-negative porin HPY16_10240 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HPY16_10245 PF00579 tRNA synthetases class I (W and Y) HPY16_10245 PF01479 S4 domain HPY16_10250 PF04225 Opacity-associated protein A LysM-like domain HPY16_10250 PF01551 Peptidase family M23 HPY16_10255 PF00873 AcrB/AcrD/AcrF family HPY16_10265 PF01521 Iron-sulphur cluster biosynthesis HPY16_10275 PF00202 Aminotransferase class-III HPY16_10280 PF01594 AI-2E family transporter HPY16_10285 PF08468 Methyltransferase small domain N-terminal HPY16_10285 PF05175 Methyltransferase small domain HPY16_10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_10290 PF00072 Response regulator receiver domain HPY16_10290 PF09308 LuxQ, periplasmic HPY16_10290 PF00512 His Kinase A (phospho-acceptor) domain HPY16_10295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY16_10300 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_10305 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY16_10305 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_10310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_10310 PF00005 ABC transporter HPY16_10315 PF00005 ABC transporter HPY16_10315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_10325 PF01869 BadF/BadG/BcrA/BcrD ATPase family HPY16_10330 PF02838 Glycosyl hydrolase family 20, domain 2 HPY16_10330 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY16_10335 PF06165 Glycosyltransferase family 36 HPY16_10335 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HPY16_10340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY16_10340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY16_10340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY16_10340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY16_10345 PF08402 TOBE domain HPY16_10345 PF00005 ABC transporter HPY16_10355 PF13416 Bacterial extracellular solute-binding protein HPY16_10360 PF00909 Ammonium Transporter Family HPY16_10365 PF00543 Nitrogen regulatory protein P-II HPY16_10370 PF06062 Uncharacterised protein family (UPF0231) HPY16_10375 PF00330 Aconitase family (aconitate hydratase) HPY16_10375 PF06434 Aconitate hydratase 2 N-terminus HPY16_10375 PF11791 Aconitate B N-terminal domain HPY16_10380 PF01734 Patatin-like phospholipase HPY16_10385 PF14814 Bifunctional transglycosylase second domain HPY16_10385 PF00905 Penicillin binding protein transpeptidase domain HPY16_10385 PF00912 Transglycosylase HPY16_10390 PF00270 DEAD/DEAH box helicase HPY16_10390 PF04408 Helicase associated domain (HA2) HPY16_10390 PF08482 ATP-dependent helicase C-terminal HPY16_10390 PF00271 Helicase conserved C-terminal domain HPY16_10400 PF17746 SfsA N-terminal OB domain HPY16_10400 PF03749 Sugar fermentation stimulation protein RE domain HPY16_10405 PF01258 Prokaryotic dksA/traR C4-type zinc finger HPY16_10410 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY16_10415 PF12626 Polymerase A arginine-rich C-terminus HPY16_10415 PF01743 Poly A polymerase head domain HPY16_10415 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY16_10420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY16_10425 PF02548 Ketopantoate hydroxymethyltransferase HPY16_10430 PF02569 Pantoate-beta-alanine ligase HPY16_10435 PF01061 ABC-2 type transporter HPY16_10440 PF00005 ABC transporter HPY16_10445 PF00916 Sulfate permease family HPY16_10445 PF01740 STAS domain HPY16_10450 PF00484 Carbonic anhydrase HPY16_10455 PF00156 Phosphoribosyl transferase domain HPY16_10460 PF00440 Bacterial regulatory proteins, tetR family HPY16_10465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY16_10470 PF04348 LppC putative lipoprotein HPY16_10475 PF02021 Uncharacterised protein family UPF0102 HPY16_10480 PF13580 SIS domain HPY16_10485 PF04972 BON domain HPY16_10490 PF04386 Stringent starvation protein B HPY16_10495 PF00043 Glutathione S-transferase, C-terminal domain HPY16_10495 PF02798 Glutathione S-transferase, N-terminal domain HPY16_10500 PF02167 Cytochrome C1 family HPY16_10505 PF00032 Cytochrome b(C-terminal)/b6/petD HPY16_10505 PF00033 Cytochrome b/b6/petB HPY16_10510 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HPY16_10510 PF00355 Rieske [2Fe-2S] domain HPY16_10515 PF00380 Ribosomal protein S9/S16 HPY16_10520 PF00572 Ribosomal protein L13 HPY16_10525 PF03969 AFG1-like ATPase HPY16_10535 PF00595 PDZ domain HPY16_10540 PF13180 PDZ domain HPY16_10545 PF01245 Ribosomal protein L19 HPY16_10550 PF01746 tRNA (Guanine-1)-methyltransferase HPY16_10555 PF05239 PRC-barrel domain HPY16_10555 PF01782 RimM N-terminal domain HPY16_10560 PF00886 Ribosomal protein S16 HPY16_10565 PF02978 Signal peptide binding domain HPY16_10565 PF00448 SRP54-type protein, GTPase domain HPY16_10565 PF02881 SRP54-type protein, helical bundle domain HPY16_10570 PF01578 Cytochrome C assembly protein HPY16_10575 PF01595 Cyclin M transmembrane N-terminal domain HPY16_10575 PF03471 Transporter associated domain HPY16_10575 PF00571 CBS domain HPY16_10580 PF02664 S-Ribosylhomocysteinase (LuxS) HPY16_10585 PF04262 Glutamate-cysteine ligase HPY16_10590 PF05193 Peptidase M16 inactive domain HPY16_10590 PF00675 Insulinase (Peptidase family M16) HPY16_10595 PF09335 SNARE associated Golgi protein HPY16_10605 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY16_10610 PF00364 Biotin-requiring enzyme HPY16_10610 PF02436 Conserved carboxylase domain HPY16_10610 PF00682 HMGL-like HPY16_10615 PF04277 Oxaloacetate decarboxylase, gamma chain HPY16_10660 PF02599 Global regulator protein family HPY16_10665 PF13840 ACT domain HPY16_10665 PF01842 ACT domain HPY16_10665 PF00696 Amino acid kinase family HPY16_10670 PF01411 tRNA synthetases class II (A) HPY16_10670 PF02272 DHHA1 domain HPY16_10670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY16_10675 PF02631 RecX family HPY16_10680 PF00154 recA bacterial DNA recombination protein HPY16_10685 PF02464 Competence-damaged protein HPY16_10690 PF12857 TOBE-like domain HPY16_10690 PF00005 ABC transporter HPY16_10695 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_10700 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_10710 PF00291 Pyridoxal-phosphate dependent enzyme HPY16_10715 PF01624 MutS domain I HPY16_10715 PF00488 MutS domain V HPY16_10715 PF05188 MutS domain II HPY16_10715 PF05190 MutS family domain IV HPY16_10715 PF05192 MutS domain III HPY16_10720 PF04539 Sigma-70 region 3 HPY16_10720 PF04545 Sigma-70, region 4 HPY16_10720 PF00140 Sigma-70 factor, region 1.2 HPY16_10720 PF04542 Sigma-70 region 2 HPY16_10725 PF01476 LysM domain HPY16_10725 PF01551 Peptidase family M23 HPY16_10735 PF01975 Survival protein SurE HPY16_10740 PF01142 tRNA pseudouridine synthase D (TruD) HPY16_10745 PF02542 YgbB family HPY16_10750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPY16_10755 PF04977 Septum formation initiator HPY16_10760 PF02673 Bacitracin resistance protein BacA HPY16_10765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY16_10770 PF02152 Dihydroneopterin aldolase HPY16_10775 PF02660 Glycerol-3-phosphate acyltransferase HPY16_10780 PF00561 alpha/beta hydrolase fold HPY16_10785 PF00814 Glycoprotease family HPY16_10790 PF01165 Ribosomal protein S21 HPY16_10795 PF09424 Yqey-like protein HPY16_10800 PF08275 DNA primase catalytic core, N-terminal domain HPY16_10800 PF01807 CHC2 zinc finger HPY16_10800 PF08278 DNA primase DnaG DnaB-binding HPY16_10800 PF10410 DnaB-helicase binding domain of primase HPY16_10805 PF04539 Sigma-70 region 3 HPY16_10805 PF04542 Sigma-70 region 2 HPY16_10805 PF04545 Sigma-70, region 4 HPY16_10805 PF03979 Sigma-70 factor, region 1.1 HPY16_10805 PF00140 Sigma-70 factor, region 1.2 HPY16_10805 PF04546 Sigma-70, non-essential region HPY16_10820 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY16_10825 PF01380 SIS domain HPY16_10830 PF08220 DeoR-like helix-turn-helix domain HPY16_10830 PF00455 DeoR C terminal sensor domain HPY16_10835 PF02887 Pyruvate kinase, alpha/beta domain HPY16_10835 PF00224 Pyruvate kinase, barrel domain HPY16_10840 PF04402 Protein of unknown function (DUF541) HPY16_10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_10845 PF03466 LysR substrate binding domain HPY16_10850 PF01810 LysE type translocator HPY16_10855 PF05552 Conserved TM helix HPY16_10855 PF00924 Mechanosensitive ion channel HPY16_10860 PF01116 Fructose-bisphosphate aldolase class-II HPY16_10865 PF00162 Phosphoglycerate kinase HPY16_10870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY16_10870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY16_10875 PF00593 TonB dependent receptor HPY16_10875 PF07715 TonB-dependent Receptor Plug Domain HPY16_10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_10880 PF03466 LysR substrate binding domain HPY16_10885 PF02779 Transketolase, pyrimidine binding domain HPY16_10885 PF00456 Transketolase, thiamine diphosphate binding domain HPY16_10885 PF02780 Transketolase, C-terminal domain HPY16_10890 PF02772 S-adenosylmethionine synthetase, central domain HPY16_10890 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPY16_10890 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPY16_10895 PF10263 SprT-like family HPY16_10895 PF17283 SprT-like zinc ribbon domain HPY16_10900 PF04231 Endonuclease I HPY16_10905 PF04452 RNA methyltransferase HPY16_10910 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HPY16_10910 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HPY16_10915 PF02622 Uncharacterized ACR, COG1678 HPY16_10920 PF03652 Holliday junction resolvase HPY16_10925 PF01479 S4 domain HPY16_10925 PF00579 tRNA synthetases class I (W and Y) HPY16_10935 PF00437 Type II/IV secretion system protein HPY16_10940 PF00437 Type II/IV secretion system protein HPY16_10945 PF01168 Alanine racemase, N-terminal domain HPY16_10950 PF03807 NADP oxidoreductase coenzyme F420-dependent HPY16_10950 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPY16_10955 PF02325 YGGT family HPY16_10960 PF02594 Uncharacterised ACR, YggU family COG1872 HPY16_10970 PF01725 Ham1 family HPY16_10975 PF06969 HemN C-terminal domain HPY16_10975 PF04055 Radical SAM superfamily HPY16_10980 PF04960 Glutaminase HPY16_10985 PF02390 Putative methyltransferase HPY16_10990 PF14815 NUDIX domain HPY16_10990 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY16_10990 PF00633 Helix-hairpin-helix motif HPY16_10990 PF10576 Iron-sulfur binding domain of endonuclease III HPY16_10995 PF04362 Bacterial Fe(2+) trafficking HPY16_11000 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HPY16_11000 PF01464 Transglycosylase SLT domain HPY16_11025 PF17200 Single Cache domain 2 HPY16_11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_11025 PF00672 HAMP domain HPY16_11055 PF05099 Tellurite resistance protein TerB HPY16_11055 PF00226 DnaJ domain HPY16_11060 PF04453 LPS transport system D HPY16_11060 PF03968 OstA-like protein HPY16_11065 PF09312 SurA N-terminal domain HPY16_11070 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HPY16_11075 PF00398 Ribosomal RNA adenine dimethylase HPY16_11080 PF04379 ApaG domain HPY16_11085 PF00149 Calcineurin-like phosphoesterase HPY16_11090 PF00186 Dihydrofolate reductase HPY16_11095 PF12821 Threonine/Serine exporter, ThrE HPY16_11100 PF06738 Putative threonine/serine exporter HPY16_11105 PF01926 50S ribosome-binding GTPase HPY16_11105 PF01018 GTP1/OBG HPY16_11110 PF01016 Ribosomal L27 protein HPY16_11115 PF00829 Ribosomal prokaryotic L21 protein HPY16_11120 PF00348 Polyprenyl synthetase HPY16_11125 PF13520 Amino acid permease HPY16_11130 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HPY16_11130 PF00056 lactate/malate dehydrogenase, NAD binding domain HPY16_11135 PF02863 Arginine repressor, C-terminal domain HPY16_11135 PF01316 Arginine repressor, DNA binding domain HPY16_11140 PF16868 NMT1-like family HPY16_11150 PF00582 Universal stress protein family HPY16_11165 PF06877 Regulator of ribonuclease activity B HPY16_11175 PF01523 Putative modulator of DNA gyrase HPY16_11180 PF00795 Carbon-nitrogen hydrolase HPY16_11185 PF13502 AsmA-like C-terminal region HPY16_11185 PF13116 Protein of unknown function HPY16_11190 PF10150 Ribonuclease E/G family HPY16_11190 PF00575 S1 RNA binding domain HPY16_11195 PF02545 Maf-like protein HPY16_11200 PF04093 rod shape-determining protein MreD HPY16_11205 PF04085 rod shape-determining protein MreC HPY16_11245 PF00114 Pilin (bacterial filament) HPY16_11245 PF07963 Prokaryotic N-terminal methylation motif HPY16_11255 PF00482 Type II secretion system (T2SS), protein F HPY16_11260 PF00437 Type II/IV secretion system protein HPY16_11270 PF13401 AAA domain HPY16_11270 PF01471 Putative peptidoglycan binding domain HPY16_11295 PF00563 EAL domain HPY16_11295 PF17157 Gammaproteobacterial periplasmic sensor domain HPY16_11295 PF00990 Diguanylate cyclase, GGDEF domain HPY16_11300 PF00436 Single-strand binding protein family HPY16_11305 PF00196 Bacterial regulatory proteins, luxR family HPY16_11310 PF00483 Nucleotidyl transferase HPY16_11315 PF00005 ABC transporter HPY16_11315 PF17755 UvrA DNA-binding domain HPY16_11315 PF17760 UvrA interaction domain HPY16_11325 PF00266 Aminotransferase class-V HPY16_11330 PF00696 Amino acid kinase family HPY16_11330 PF01842 ACT domain HPY16_11335 PF00809 Pterin binding enzyme HPY16_11335 PF02965 Vitamin B12 dependent methionine synthase, activation domain HPY16_11335 PF02574 Homocysteine S-methyltransferase HPY16_11335 PF02607 B12 binding domain HPY16_11335 PF02310 B12 binding domain HPY16_11340 PF00999 Sodium/hydrogen exchanger family HPY16_11410 PF01507 Phosphoadenosine phosphosulfate reductase family HPY16_11415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HPY16_11415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HPY16_11420 PF00175 Oxidoreductase NAD-binding domain HPY16_11420 PF00258 Flavodoxin HPY16_11420 PF00667 FAD binding domain HPY16_11440 PF09583 Phage shock protein G (Phageshock_PspG) HPY16_11445 PF01207 Dihydrouridine synthase (Dus) HPY16_11450 PF01475 Ferric uptake regulator family HPY16_11460 PF12706 Beta-lactamase superfamily domain HPY16_11465 PF00342 Phosphoglucose isomerase HPY16_11470 PF01894 Uncharacterised protein family UPF0047 HPY16_11475 PF00842 Alanine racemase, C-terminal domain HPY16_11475 PF01168 Alanine racemase, N-terminal domain HPY16_11480 PF03796 DnaB-like helicase C terminal domain HPY16_11480 PF00772 DnaB-like helicase N terminal domain HPY16_11490 PF03948 Ribosomal protein L9, C-terminal domain HPY16_11490 PF01281 Ribosomal protein L9, N-terminal domain HPY16_11495 PF01084 Ribosomal protein S18 HPY16_11500 PF00436 Single-strand binding protein family HPY16_11505 PF01250 Ribosomal protein S6 HPY16_11510 PF00210 Ferritin-like domain HPY16_11515 PF04324 BFD-like [2Fe-2S] binding domain HPY16_11520 PF03143 Elongation factor Tu C-terminal domain HPY16_11520 PF03144 Elongation factor Tu domain 2 HPY16_11520 PF00009 Elongation factor Tu GTP binding domain HPY16_11525 PF14492 Elongation Factor G, domain II HPY16_11525 PF03764 Elongation factor G, domain IV HPY16_11525 PF03144 Elongation factor Tu domain 2 HPY16_11525 PF00679 Elongation factor G C-terminus HPY16_11525 PF00009 Elongation factor Tu GTP binding domain HPY16_11530 PF00177 Ribosomal protein S7p/S5e HPY16_11535 PF00164 Ribosomal protein S12/S23 HPY16_11545 PF02635 DsrE/DsrF-like family HPY16_11550 PF02635 DsrE/DsrF-like family HPY16_11555 PF08348 YheO-like PAS domain HPY16_11555 PF13309 HTH domain HPY16_11560 PF01797 Transposase IS200 like HPY16_11565 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY16_11565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY16_11575 PF04102 SlyX HPY16_11580 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HPY16_11585 PF01145 SPFH domain / Band 7 family HPY16_11590 PF01145 SPFH domain / Band 7 family HPY16_11590 PF12221 Bacterial membrane protein N terminal HPY16_11595 PF01926 50S ribosome-binding GTPase HPY16_11595 PF13167 GTP-binding GTPase N-terminal HPY16_11595 PF16360 GTP-binding GTPase Middle Region HPY16_11600 PF17209 Hfq protein HPY16_11610 PF01119 DNA mismatch repair protein, C-terminal domain HPY16_11610 PF08676 MutL C terminal dimerisation domain HPY16_11615 PF01520 N-acetylmuramoyl-L-alanine amidase HPY16_11620 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HPY16_11625 PF08331 Domain of unknown function (DUF1730) HPY16_11675 PF00929 Exonuclease HPY16_11680 PF03193 RsgA GTPase HPY16_11685 PF02666 Phosphatidylserine decarboxylase HPY16_11690 PF00939 Sodium:sulfate symporter transmembrane region HPY16_11700 PF01676 Metalloenzyme superfamily HPY16_11700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HPY16_11705 PF01551 Peptidase family M23 HPY16_11715 PF00440 Bacterial regulatory proteins, tetR family HPY16_11715 PF08360 QacR-like protein, C-terminal region HPY16_11720 PF01208 Uroporphyrinogen decarboxylase (URO-D) HPY16_11725 PF09297 NADH pyrophosphatase zinc ribbon domain HPY16_11725 PF00293 NUDIX domain HPY16_11730 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HPY16_11735 PF04998 RNA polymerase Rpb1, domain 5 HPY16_11735 PF05000 RNA polymerase Rpb1, domain 4 HPY16_11735 PF04997 RNA polymerase Rpb1, domain 1 HPY16_11735 PF00623 RNA polymerase Rpb1, domain 2 HPY16_11735 PF04983 RNA polymerase Rpb1, domain 3 HPY16_11740 PF00562 RNA polymerase Rpb2, domain 6 HPY16_11740 PF10385 RNA polymerase beta subunit external 1 domain HPY16_11740 PF04565 RNA polymerase Rpb2, domain 3 HPY16_11740 PF04561 RNA polymerase Rpb2, domain 2 HPY16_11740 PF04563 RNA polymerase beta subunit HPY16_11740 PF04560 RNA polymerase Rpb2, domain 7 HPY16_11745 PF16320 Ribosomal protein L7/L12 dimerisation domain HPY16_11745 PF00542 Ribosomal protein L7/L12 C-terminal domain HPY16_11750 PF00466 Ribosomal protein L10 HPY16_11755 PF00687 Ribosomal protein L1p/L10e family HPY16_11760 PF00298 Ribosomal protein L11, RNA binding domain HPY16_11760 PF03946 Ribosomal protein L11, N-terminal domain HPY16_11765 PF02357 Transcription termination factor nusG HPY16_11765 PF00467 KOW motif HPY16_11770 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HPY16_11775 PF03144 Elongation factor Tu domain 2 HPY16_11775 PF00009 Elongation factor Tu GTP binding domain HPY16_11775 PF03143 Elongation factor Tu C-terminal domain HPY16_11800 PF00485 Phosphoribulokinase / Uridine kinase family HPY16_11805 PF02237 Biotin protein ligase C terminal domain HPY16_11805 PF08279 HTH domain HPY16_11805 PF03099 Biotin/lipoate A/B protein ligase family HPY16_11810 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPY16_11810 PF01565 FAD binding domain HPY16_11820 PF13091 PLD-like domain HPY16_11855 PF00175 Oxidoreductase NAD-binding domain HPY16_11860 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY16_11860 PF00970 Oxidoreductase FAD-binding domain HPY16_11860 PF00175 Oxidoreductase NAD-binding domain HPY16_11865 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HPY16_11875 PF07497 Rho termination factor, RNA-binding domain HPY16_11875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY16_11875 PF07498 Rho termination factor, N-terminal domain HPY16_11880 PF00085 Thioredoxin HPY16_11885 PF00270 DEAD/DEAH box helicase HPY16_11885 PF00271 Helicase conserved C-terminal domain HPY16_11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_11895 PF00512 His Kinase A (phospho-acceptor) domain HPY16_11895 PF09456 RcsC Alpha-Beta-Loop (ABL) HPY16_11895 PF00072 Response regulator receiver domain HPY16_11900 PF12832 MFS_1 like family HPY16_11915 PF00501 AMP-binding enzyme HPY16_11915 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY16_11915 PF13193 AMP-binding enzyme C-terminal domain HPY16_11920 PF01220 Dehydroquinase class II HPY16_11925 PF00364 Biotin-requiring enzyme HPY16_11930 PF02785 Biotin carboxylase C-terminal domain HPY16_11930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY16_11930 PF00289 Biotin carboxylase, N-terminal domain HPY16_11940 PF01207 Dihydrouridine synthase (Dus) HPY16_11945 PF02954 Bacterial regulatory protein, Fis family HPY16_11950 PF13784 Fic/DOC family N-terminal HPY16_11950 PF02661 Fic/DOC family HPY16_11955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY16_11955 PF00356 Bacterial regulatory proteins, lacI family HPY16_11960 PF11647 Membrane Localization Domain HPY16_11965 PF01699 Sodium/calcium exchanger protein HPY16_11970 PF00920 Dehydratase family HPY16_11975 PF01202 Shikimate kinase HPY16_11980 PF02447 GntP family permease HPY16_11985 PF01081 KDPG and KHG aldolase HPY16_11990 PF07715 TonB-dependent Receptor Plug Domain HPY16_11990 PF00593 TonB dependent receptor HPY16_12005 PF17200 Single Cache domain 2 HPY16_12005 PF00672 HAMP domain HPY16_12005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_12010 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY16_12010 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY16_12010 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY16_12015 PF13520 Amino acid permease HPY16_12020 PF00486 Transcriptional regulatory protein, C terminal HPY16_12020 PF18500 CadC C-terminal domain 1 HPY16_12025 PF13411 MerR HTH family regulatory protein HPY16_12035 PF01808 AICARFT/IMPCHase bienzyme HPY16_12035 PF02142 MGS-like domain HPY16_12040 PF02844 Phosphoribosylglycinamide synthetase, N domain HPY16_12040 PF02843 Phosphoribosylglycinamide synthetase, C domain HPY16_12040 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPY16_12050 PF00216 Bacterial DNA-binding protein HPY16_12055 PF01595 Cyclin M transmembrane N-terminal domain HPY16_12055 PF00571 CBS domain HPY16_12060 PF04222 Protein of unknown function (DUF416) HPY16_12065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY16_12070 PF03167 Uracil DNA glycosylase superfamily HPY16_12075 PF00924 Mechanosensitive ion channel HPY16_12090 PF14706 Transposase DNA-binding HPY16_12090 PF02281 Transposase Tn5 dimerisation domain HPY16_12090 PF01609 Transposase DDE domain HPY16_12095 PF00753 Metallo-beta-lactamase superfamily HPY16_12095 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HPY16_12095 PF10996 Beta-Casp domain HPY16_12100 PF02719 Polysaccharide biosynthesis protein HPY16_12105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPY16_12115 PF02397 Bacterial sugar transferase HPY16_12125 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY16_12145 PF00977 Histidine biosynthesis protein HPY16_12150 PF00117 Glutamine amidotransferase class-I HPY16_12175 PF00551 Formyl transferase HPY16_12175 PF02911 Formyl transferase, C-terminal domain HPY16_12180 PF13537 Glutamine amidotransferase domain HPY16_12180 PF00733 Asparagine synthase HPY16_12190 PF01757 Acyltransferase family HPY16_12195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPY16_12200 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_12205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY16_12205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY16_12205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY16_12210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY16_12210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPY16_12215 PF02706 Chain length determinant protein HPY16_12220 PF01370 NAD dependent epimerase/dehydratase family HPY16_12225 PF01522 Polysaccharide deacetylase HPY16_12225 PF00457 Glycosyl hydrolases family 11 HPY16_12245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY16_12250 PF04488 Glycosyltransferase sugar-binding region containing DXD motif HPY16_12255 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HPY16_12285 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY16_12290 PF00535 Glycosyl transferase family 2 HPY16_12295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY16_12300 PF01467 Cytidylyltransferase-like HPY16_12305 PF06827 Zinc finger found in FPG and IleRS HPY16_12305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HPY16_12305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HPY16_12315 PF00471 Ribosomal protein L33 HPY16_12320 PF00830 Ribosomal L28 family HPY16_12325 PF04002 RadC-like JAB domain HPY16_12330 PF00672 HAMP domain HPY16_12330 PF17200 Single Cache domain 2 HPY16_12330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_12335 PF02441 Flavoprotein HPY16_12335 PF04127 DNA / pantothenate metabolism flavoprotein HPY16_12345 PF00440 Bacterial regulatory proteins, tetR family HPY16_12350 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY16_12355 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY16_12360 PF00156 Phosphoribosyl transferase domain HPY16_12365 PF01138 3' exoribonuclease family, domain 1 HPY16_12365 PF03725 3' exoribonuclease family, domain 2 HPY16_12370 PF03755 YicC-like family, N-terminal region HPY16_12370 PF08340 Domain of unknown function (DUF1732) HPY16_12375 PF03350 Uncharacterized protein family, UPF0114 HPY16_12380 PF00267 Gram-negative porin HPY16_12385 PF00367 phosphotransferase system, EIIB HPY16_12385 PF02378 Phosphotransferase system, EIIC HPY16_12390 PF13580 SIS domain HPY16_12395 PF01380 SIS domain HPY16_12395 PF01418 Helix-turn-helix domain, rpiR family HPY16_12405 PF00271 Helicase conserved C-terminal domain HPY16_12405 PF09382 RQC domain HPY16_12405 PF00270 DEAD/DEAH box helicase HPY16_12405 PF16124 RecQ zinc-binding HPY16_12405 PF00570 HRDC domain HPY16_12410 PF00892 EamA-like transporter family HPY16_12420 PF12833 Helix-turn-helix domain HPY16_12425 PF01810 LysE type translocator HPY16_12430 PF13361 UvrD-like helicase C-terminal domain HPY16_12430 PF00580 UvrD/REP helicase N-terminal domain HPY16_12435 PF01432 Peptidase family M3 HPY16_12440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HPY16_12445 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_12445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY16_12450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY16_12460 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY16_12460 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_12470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY16_12475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_12475 PF00005 ABC transporter HPY16_12510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY16_12515 PF13361 UvrD-like helicase C-terminal domain HPY16_12515 PF00580 UvrD/REP helicase N-terminal domain HPY16_12520 PF00440 Bacterial regulatory proteins, tetR family HPY16_12525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY16_12530 PF00873 AcrB/AcrD/AcrF family HPY16_12535 PF04380 Membrane fusogenic activity HPY16_12540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HPY16_12540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HPY16_12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_12545 PF03466 LysR substrate binding domain HPY16_12615 PF12724 Flavodoxin domain HPY16_12620 PF02386 Cation transport protein HPY16_12625 PF09186 Domain of unknown function (DUF1949) HPY16_12625 PF01205 Uncharacterized protein family UPF0029 HPY16_12630 PF00378 Enoyl-CoA hydratase/isomerase HPY16_12630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY16_12630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY16_12635 PF02803 Thiolase, C-terminal domain HPY16_12635 PF00108 Thiolase, N-terminal domain HPY16_12640 PF03466 LysR substrate binding domain HPY16_12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_12645 PF07690 Major Facilitator Superfamily HPY16_12650 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_12650 PF12804 MobA-like NTP transferase domain HPY16_12655 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HPY16_12655 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HPY16_12660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY16_12660 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY16_12665 PF00231 ATP synthase HPY16_12670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY16_12670 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY16_12670 PF00306 ATP synthase alpha/beta chain, C terminal domain HPY16_12675 PF00213 ATP synthase delta (OSCP) subunit HPY16_12680 PF00430 ATP synthase B/B' CF(0) HPY16_12685 PF00137 ATP synthase subunit C HPY16_12690 PF00119 ATP synthase A chain HPY16_12695 PF03899 ATP synthase I chain HPY16_12700 PF17762 HTH domain found in ParB protein HPY16_12700 PF02195 ParB-like nuclease domain HPY16_12705 PF13614 AAA domain HPY16_12710 PF02527 rRNA small subunit methyltransferase G HPY16_12715 PF01134 Glucose inhibited division protein A HPY16_12715 PF13932 GidA associated domain HPY16_12720 PF00258 Flavodoxin HPY16_12725 PF10396 GTP-binding protein TrmE N-terminus HPY16_12725 PF12631 MnmE helical domain HPY16_12725 PF01926 50S ribosome-binding GTPase HPY16_12730 PF14849 YidC periplasmic domain HPY16_12730 PF02096 60Kd inner membrane protein HPY16_12735 PF01809 Putative membrane protein insertion efficiency factor HPY16_12740 PF00825 Ribonuclease P HPY16_12745 PF00468 Ribosomal protein L34 HPY16_12750 PF00005 ABC transporter HPY16_12755 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_12760 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_12765 PF02195 ParB-like nuclease domain HPY16_12765 PF08775 ParB family HPY16_12770 PF18607 ParA helix turn helix domain HPY16_12770 PF13614 AAA domain HPY16_12795 PF01709 Transcriptional regulator HPY16_12800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY16_12800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HPY16_12805 PF00672 HAMP domain HPY16_12805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_12805 PF17200 Single Cache domain 2 HPY16_12810 PF10928 Protein of unknown function (DUF2810) HPY16_12815 PF00196 Bacterial regulatory proteins, luxR family HPY16_12815 PF17874 MalT-like TPR region HPY16_12820 PF00343 Carbohydrate phosphorylase HPY16_12825 PF02446 4-alpha-glucanotransferase HPY16_12830 PF02806 Alpha amylase, C-terminal all-beta domain HPY16_12830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY16_12830 PF00128 Alpha amylase, catalytic domain HPY16_12835 PF05638 Type VI secretion system effector, Hcp HPY16_12840 PF16671 Actin cross-linking domain HPY16_12840 PF04717 Type VI secretion system, phage-baseplate injector HPY16_12850 PF01476 LysM domain HPY16_12865 PF00842 Alanine racemase, C-terminal domain HPY16_12865 PF01168 Alanine racemase, N-terminal domain HPY16_12865 PF01757 Acyltransferase family HPY16_12875 PF00939 Sodium:sulfate symporter transmembrane region HPY16_12880 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY16_12885 PF08329 Chitinase A, N-terminal domain HPY16_12885 PF00704 Glycosyl hydrolases family 18 HPY16_12910 PF01569 PAP2 superfamily HPY16_12915 PF02225 PA domain HPY16_12915 PF04389 Peptidase family M28 HPY16_12920 PF00375 Sodium:dicarboxylate symporter family HPY16_12930 PF02630 SCO1/SenC HPY16_12945 PF03616 Sodium/glutamate symporter HPY16_12950 PF07238 PilZ domain HPY16_12950 PF12945 Flagellar protein YcgR HPY16_12965 PF00529 HlyD membrane-fusion protein of T1SS HPY16_12965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY16_12970 PF11742 Protein of unknown function (DUF3302) HPY16_12975 PF00990 Diguanylate cyclase, GGDEF domain HPY16_12990 PF01048 Phosphorylase superfamily HPY16_12995 PF08349 Protein of unknown function (DUF1722) HPY16_13000 PF13411 MerR HTH family regulatory protein HPY16_13005 PF00875 DNA photolyase HPY16_13005 PF03441 FAD binding domain of DNA photolyase HPY16_13010 PF03734 L,D-transpeptidase catalytic domain HPY16_13010 PF01476 LysM domain HPY16_13010 PF17969 L,D-transpeptidase C-terminal domain HPY16_13020 PF00270 DEAD/DEAH box helicase HPY16_13020 PF00271 Helicase conserved C-terminal domain HPY16_13025 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HPY16_13025 PF00326 Prolyl oligopeptidase family HPY16_13030 PF00593 TonB dependent receptor HPY16_13030 PF07715 TonB-dependent Receptor Plug Domain HPY16_13050 PF12849 PBP superfamily domain HPY16_13055 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_13060 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_13065 PF00005 ABC transporter HPY16_13070 PF00072 Response regulator receiver domain HPY16_13070 PF00990 Diguanylate cyclase, GGDEF domain HPY16_13090 PF00916 Sulfate permease family HPY16_13090 PF01740 STAS domain HPY16_13100 PF01476 LysM domain HPY16_13100 PF01551 Peptidase family M23 HPY16_13100 PF08525 Opacity-associated protein A N-terminal motif HPY16_13105 PF13188 PAS domain HPY16_13105 PF03707 Bacterial signalling protein N terminal repeat HPY16_13105 PF00990 Diguanylate cyclase, GGDEF domain HPY16_13105 PF00563 EAL domain HPY16_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_13110 PF03466 LysR substrate binding domain HPY16_13115 PF07690 Major Facilitator Superfamily HPY16_13120 PF09278 MerR, DNA binding HPY16_13120 PF00376 MerR family regulatory protein HPY16_13135 PF00375 Sodium:dicarboxylate symporter family HPY16_13150 PF02001 Protein of unknown function DUF134 HPY16_13175 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY16_13175 PF01483 Proprotein convertase P-domain HPY16_13175 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY16_13175 PF01447 Thermolysin metallopeptidase, catalytic domain HPY16_13185 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HPY16_13185 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HPY16_13190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPY16_13190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY16_13195 PF00581 Rhodanese-like domain HPY16_13200 PF00563 EAL domain HPY16_13200 PF00196 Bacterial regulatory proteins, luxR family HPY16_13205 PF13419 Haloacid dehalogenase-like hydrolase HPY16_13210 PF00916 Sulfate permease family HPY16_13210 PF01740 STAS domain HPY16_13215 PF00849 RNA pseudouridylate synthase HPY16_13275 PF10431 C-terminal, D2-small domain, of ClpB protein HPY16_13275 PF07724 AAA domain (Cdc48 subfamily) HPY16_13275 PF00004 ATPase family associated with various cellular activities (AAA) HPY16_13275 PF17871 AAA lid domain HPY16_13325 PF05025 RbsD / FucU transport protein family HPY16_13330 PF00005 ABC transporter HPY16_13335 PF02653 Branched-chain amino acid transport system / permease component HPY16_13340 PF13407 Periplasmic binding protein domain HPY16_13345 PF00294 pfkB family carbohydrate kinase HPY16_13350 PF00356 Bacterial regulatory proteins, lacI family HPY16_13355 PF04973 Nicotinamide mononucleotide transporter HPY16_13360 PF01048 Phosphorylase superfamily HPY16_13370 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY16_13375 PF07690 Major Facilitator Superfamily HPY16_13390 PF00512 His Kinase A (phospho-acceptor) domain HPY16_13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_13390 PF02743 Cache domain HPY16_13395 PF00072 Response regulator receiver domain HPY16_13395 PF00158 Sigma-54 interaction domain HPY16_13395 PF02954 Bacterial regulatory protein, Fis family HPY16_13410 PF01266 FAD dependent oxidoreductase HPY16_13415 PF12561 ToxR activated gene A lipoprotein domain HPY16_13415 PF00041 Fibronectin type III domain HPY16_13420 PF01327 Polypeptide deformylase HPY16_13425 PF03611 PTS system sugar-specific permease component HPY16_13435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY16_13445 PF00970 Oxidoreductase FAD-binding domain HPY16_13445 PF00042 Globin HPY16_13445 PF00175 Oxidoreductase NAD-binding domain HPY16_13450 PF03334 Na+/H+ antiporter subunit HPY16_13455 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HPY16_13475 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HPY16_13475 PF13244 Domain of unknown function (DUF4040) HPY16_13475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY16_13475 PF00361 Proton-conducting membrane transporter HPY16_13485 PF00582 Universal stress protein family HPY16_13490 PF03222 Tryptophan/tyrosine permease family HPY16_13495 PF01212 Beta-eliminating lyase HPY16_13505 PF12843 Putative quorum-sensing-regulated virulence factor HPY16_13515 PF08448 PAS fold HPY16_13515 PF00990 Diguanylate cyclase, GGDEF domain HPY16_13515 PF00563 EAL domain HPY16_13520 PF00313 'Cold-shock' DNA-binding domain HPY16_13535 PF07584 Aerotolerance regulator N-terminal HPY16_13535 PF13519 von Willebrand factor type A domain HPY16_13550 PF01882 Protein of unknown function DUF58 HPY16_13555 PF07726 ATPase family associated with various cellular activities (AAA) HPY16_13555 PF17863 AAA lid domain HPY16_13560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_13560 PF00672 HAMP domain HPY16_13560 PF02743 Cache domain HPY16_13575 PF07662 Na+ dependent nucleoside transporter C-terminus HPY16_13575 PF01773 Na+ dependent nucleoside transporter N-terminus HPY16_13575 PF07670 Nucleoside recognition HPY16_13580 PF01546 Peptidase family M20/M25/M40 HPY16_13580 PF07687 Peptidase dimerisation domain HPY16_13590 PF00158 Sigma-54 interaction domain HPY16_13590 PF01590 GAF domain HPY16_13595 PF00175 Oxidoreductase NAD-binding domain HPY16_13595 PF00970 Oxidoreductase FAD-binding domain HPY16_13595 PF00042 Globin HPY16_13600 PF00313 'Cold-shock' DNA-binding domain HPY16_13605 PF03889 Alternative ribosome-rescue factor A HPY16_13620 PF00072 Response regulator receiver domain HPY16_13630 PF03853 YjeF-related protein N-terminus HPY16_13630 PF01256 Carbohydrate kinase HPY16_13635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY16_13635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY16_13645 PF07885 Ion channel HPY16_13655 PF00478 IMP dehydrogenase / GMP reductase domain HPY16_13660 PF00145 C-5 cytosine-specific DNA methylase HPY16_13680 PF00271 Helicase conserved C-terminal domain HPY16_13680 PF00270 DEAD/DEAH box helicase HPY16_13685 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY16_13690 PF02540 NAD synthase HPY16_13695 PF01467 Cytidylyltransferase-like HPY16_13700 PF11849 Domain of unknown function (DUF3369) HPY16_13710 PF00512 His Kinase A (phospho-acceptor) domain HPY16_13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_13710 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_13720 PF03553 Na+/H+ antiporter family HPY16_13725 PF07690 Major Facilitator Superfamily HPY16_13735 PF00657 GDSL-like Lipase/Acylhydrolase HPY16_13740 PF07968 Leukocidin/Hemolysin toxin family HPY16_13740 PF16458 Beta-prism lectin HPY16_13740 PF12563 Hemolytic toxin N terminal HPY16_13745 PF00672 HAMP domain HPY16_13745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_13745 PF12729 Four helix bundle sensory module for signal transduction HPY16_13750 PF00561 alpha/beta hydrolase fold HPY16_13755 PF03280 Proteobacterial lipase chaperone protein HPY16_13760 PF00801 PKD domain HPY16_13760 PF05547 Immune inhibitor A peptidase M6 HPY16_13785 PF01032 FecCD transport family HPY16_13790 PF01032 FecCD transport family HPY16_13795 PF00005 ABC transporter HPY16_13800 PF12833 Helix-turn-helix domain HPY16_13805 PF00593 TonB dependent receptor HPY16_13805 PF07715 TonB-dependent Receptor Plug Domain HPY16_13815 PF00871 Acetokinase family HPY16_13820 PF01022 Bacterial regulatory protein, arsR family HPY16_13825 PF01758 Sodium Bile acid symporter family HPY16_13830 PF01609 Transposase DDE domain HPY16_13830 PF14706 Transposase DNA-binding HPY16_13830 PF02281 Transposase Tn5 dimerisation domain HPY16_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_13840 PF03466 LysR substrate binding domain HPY16_13850 PF00672 HAMP domain HPY16_13850 PF00512 His Kinase A (phospho-acceptor) domain HPY16_13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_13855 PF00072 Response regulator receiver domain HPY16_13855 PF00486 Transcriptional regulatory protein, C terminal HPY16_13865 PF01261 Xylose isomerase-like TIM barrel HPY16_13870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY16_13880 PF00596 Class II Aldolase and Adducin N-terminal domain HPY16_13885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY16_13890 PF03611 PTS system sugar-specific permease component HPY16_13895 PF08220 DeoR-like helix-turn-helix domain HPY16_13895 PF00455 DeoR C terminal sensor domain HPY16_13910 PF00128 Alpha amylase, catalytic domain HPY16_13915 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_13930 PF00072 Response regulator receiver domain HPY16_13930 PF00486 Transcriptional regulatory protein, C terminal HPY16_13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_13935 PF00989 PAS fold HPY16_13935 PF00512 His Kinase A (phospho-acceptor) domain HPY16_13935 PF16736 Single Cache-like HPY16_13960 PF03466 LysR substrate binding domain HPY16_13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_13965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_13965 PF02743 Cache domain HPY16_13965 PF00672 HAMP domain HPY16_13975 PF07943 Penicillin-binding protein 5, C-terminal domain HPY16_13975 PF00768 D-alanyl-D-alanine carboxypeptidase HPY16_13990 PF00194 Eukaryotic-type carbonic anhydrase HPY16_13995 PF02347 Glycine cleavage system P-protein HPY16_14000 PF01597 Glycine cleavage H-protein HPY16_14005 PF00464 Serine hydroxymethyltransferase HPY16_14015 PF08669 Glycine cleavage T-protein C-terminal barrel domain HPY16_14015 PF01571 Aminomethyltransferase folate-binding domain HPY16_14020 PF03129 Anticodon binding domain HPY16_14020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY16_14020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY16_14020 PF02824 TGS domain HPY16_14025 PF05198 Translation initiation factor IF-3, N-terminal domain HPY16_14025 PF00707 Translation initiation factor IF-3, C-terminal domain HPY16_14030 PF01632 Ribosomal protein L35 HPY16_14035 PF00453 Ribosomal protein L20 HPY16_14040 PF00589 Phage integrase family HPY16_14040 PF13495 Phage integrase, N-terminal SAM-like domain HPY16_14085 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HPY16_14105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY16_14120 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HPY16_14185 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HPY16_14190 PF01381 Helix-turn-helix HPY16_14340 PF13302 Acetyltransferase (GNAT) domain HPY16_14400 PF13302 Acetyltransferase (GNAT) domain HPY16_14405 PF01636 Phosphotransferase enzyme family HPY16_14510 PF01119 DNA mismatch repair protein, C-terminal domain HPY16_14510 PF08676 MutL C terminal dimerisation domain HPY16_14600 PF14602 Hexapeptide repeat of succinyl-transferase HPY16_14600 PF12804 MobA-like NTP transferase domain HPY16_14600 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_14720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY16_14730 PF01797 Transposase IS200 like HPY16_14785 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HPY16_14790 PF01381 Helix-turn-helix HPY16_14800 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_14850 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HPY16_14855 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HPY16_14940 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HPY16_15000 PF02810 SEC-C motif HPY16_15000 PF07517 SecA DEAD-like domain HPY16_15000 PF01043 SecA preprotein cross-linking domain HPY16_15000 PF07516 SecA Wing and Scaffold domain HPY16_15030 PF09722 Protein of unknown function (DUF2384) HPY16_15060 PF13302 Acetyltransferase (GNAT) domain HPY16_15090 PF01966 HD domain HPY16_15100 PF01636 Phosphotransferase enzyme family HPY16_15250 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HPY16_15275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY16_15295 PF00293 NUDIX domain HPY16_15415 PF05014 Nucleoside 2-deoxyribosyltransferase HPY16_15440 PF07516 SecA Wing and Scaffold domain HPY16_15440 PF01043 SecA preprotein cross-linking domain HPY16_15440 PF07517 SecA DEAD-like domain HPY16_15440 PF02810 SEC-C motif HPY16_15455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY16_15470 PF04229 GrpB protein HPY16_15550 PF00583 Acetyltransferase (GNAT) family HPY16_15575 PF08212 Lipocalin-like domain HPY16_15705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY16_15705 PF01872 RibD C-terminal domain HPY16_15770 PF13302 Acetyltransferase (GNAT) domain HPY16_15810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY16_15815 PF02016 LD-carboxypeptidase N-terminal domain HPY16_15815 PF17676 LD-carboxypeptidase C-terminal domain HPY16_15835 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system HPY16_15840 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA HPY16_15860 PF07859 alpha/beta hydrolase fold HPY16_15870 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HPY16_15875 PF01381 Helix-turn-helix HPY16_15880 PF01797 Transposase IS200 like HPY16_15910 PF01797 Transposase IS200 like HPY16_15915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY16_15915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY16_15920 PF00691 OmpA family HPY16_15920 PF13488 Glycine zipper HPY16_15925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_15925 PF00672 HAMP domain HPY16_15925 PF17200 Single Cache domain 2 HPY16_15930 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HPY16_15930 PF01266 FAD dependent oxidoreductase HPY16_15935 PF00294 pfkB family carbohydrate kinase HPY16_15940 PF08244 Glycosyl hydrolases family 32 C terminal HPY16_15940 PF00251 Glycosyl hydrolases family 32 N-terminal domain HPY16_15950 PF00367 phosphotransferase system, EIIB HPY16_15950 PF02378 Phosphotransferase system, EIIC HPY16_15995 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_15995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY16_16010 PF04143 Sulphur transport HPY16_16025 PF00873 AcrB/AcrD/AcrF family HPY16_16030 PF00881 Nitroreductase family HPY16_16035 PF03992 Antibiotic biosynthesis monooxygenase HPY16_16040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_16040 PF03466 LysR substrate binding domain HPY16_16050 PF06942 GlpM protein HPY16_16065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY16_16065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY16_16100 PF00456 Transketolase, thiamine diphosphate binding domain HPY16_16100 PF02780 Transketolase, C-terminal domain HPY16_16100 PF02779 Transketolase, pyrimidine binding domain HPY16_16105 PF00923 Transaldolase/Fructose-6-phosphate aldolase HPY16_16110 PF04198 Putative sugar-binding domain HPY16_16115 PF00581 Rhodanese-like domain HPY16_16125 PF00899 ThiF family HPY16_16130 PF00994 Probable molybdopterin binding domain HPY16_16130 PF03453 MoeA N-terminal region (domain I and II) HPY16_16130 PF03454 MoeA C-terminal region (domain IV) HPY16_16135 PF01227 GTP cyclohydrolase I HPY16_16140 PF01641 SelR domain HPY16_16140 PF01625 Peptide methionine sulfoxide reductase HPY16_16145 PF01268 Formate--tetrahydrofolate ligase HPY16_16150 PF01741 Large-conductance mechanosensitive channel, MscL HPY16_16165 PF13419 Haloacid dehalogenase-like hydrolase HPY16_16170 PF14760 Rnk N-terminus HPY16_16170 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY16_16175 PF13419 Haloacid dehalogenase-like hydrolase HPY16_16185 PF00266 Aminotransferase class-V HPY16_16195 PF00005 ABC transporter HPY16_16200 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_16205 PF07702 UTRA domain HPY16_16205 PF00392 Bacterial regulatory proteins, gntR family HPY16_16215 PF00854 POT family HPY16_16240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY16_16245 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_16250 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_16250 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY16_16255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_16255 PF00005 ABC transporter HPY16_16260 PF12804 MobA-like NTP transferase domain HPY16_16260 PF03479 Plants and Prokaryotes Conserved (PCC) domain HPY16_16260 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_16275 PF00043 Glutathione S-transferase, C-terminal domain HPY16_16275 PF02798 Glutathione S-transferase, N-terminal domain HPY16_16295 PF03061 Thioesterase superfamily HPY16_16305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY16_16305 PF12793 Sugar transport-related sRNA regulator N-term HPY16_16310 PF00593 TonB dependent receptor HPY16_16310 PF07715 TonB-dependent Receptor Plug Domain HPY16_16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_16315 PF03466 LysR substrate binding domain HPY16_16320 PF13380 CoA binding domain HPY16_16320 PF00583 Acetyltransferase (GNAT) family HPY16_16320 PF13607 Succinyl-CoA ligase like flavodoxin domain HPY16_16330 PF01820 D-ala D-ala ligase N-terminus HPY16_16330 PF07478 D-ala D-ala ligase C-terminus HPY16_16340 PF01253 Translation initiation factor SUI1 HPY16_16345 PF03701 Uncharacterised protein family (UPF0181) HPY16_16360 PF00072 Response regulator receiver domain HPY16_16360 PF00486 Transcriptional regulatory protein, C terminal HPY16_16370 PF02233 NAD(P) transhydrogenase beta subunit HPY16_16375 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY16_16375 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HPY16_16375 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY16_16390 PF00990 Diguanylate cyclase, GGDEF domain HPY16_16390 PF17158 Membrane-associated sensor, integral membrane domain HPY16_16410 PF17151 Periplasmic sensor domain HPY16_16410 PF00990 Diguanylate cyclase, GGDEF domain HPY16_16440 PF03831 PhnA domain HPY16_16440 PF08274 PhnA Zinc-Ribbon HPY16_16450 PF03741 Integral membrane protein TerC family HPY16_16455 PF00149 Calcineurin-like phosphoesterase HPY16_16455 PF02872 5'-nucleotidase, C-terminal domain HPY16_16460 PF11398 Protein of unknown function (DUF2813) HPY16_16465 PF06496 Protein of unknown function (DUF1097) HPY16_16470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_16470 PF03466 LysR substrate binding domain HPY16_16475 PF01226 Formate/nitrite transporter HPY16_16480 PF04264 YceI-like domain HPY16_16485 PF01292 Prokaryotic cytochrome b561 HPY16_16495 PF10388 EAL-domain associated signalling protein domain HPY16_16495 PF00563 EAL domain HPY16_16510 PF02416 mttA/Hcf106 family HPY16_16515 PF00486 Transcriptional regulatory protein, C terminal HPY16_16515 PF00072 Response regulator receiver domain HPY16_16520 PF02702 Osmosensitive K+ channel His kinase sensor domain HPY16_16520 PF00512 His Kinase A (phospho-acceptor) domain HPY16_16520 PF13493 Domain of unknown function (DUF4118) HPY16_16520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_16525 PF10371 Domain of unknown function HPY16_16525 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPY16_16525 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPY16_16525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY16_16525 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPY16_16530 PF02705 K+ potassium transporter HPY16_16535 PF01926 50S ribosome-binding GTPase HPY16_16540 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPY16_16540 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPY16_16545 PF00654 Voltage gated chloride channel HPY16_16555 PF00155 Aminotransferase class I and II HPY16_16565 PF13476 AAA domain HPY16_16570 PF12320 Type 5 capsule protein repressor C-terminal domain HPY16_16570 PF00149 Calcineurin-like phosphoesterase HPY16_16575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY16_16575 PF00356 Bacterial regulatory proteins, lacI family HPY16_16580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY16_16580 PF00381 PTS HPr component phosphorylation site HPY16_16585 PF00294 pfkB family carbohydrate kinase HPY16_16590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY16_16590 PF02378 Phosphotransferase system, EIIC HPY16_16595 PF18030 RimK PreATP-grasp domain HPY16_16595 PF08443 RimK-like ATP-grasp domain HPY16_16600 PF00155 Aminotransferase class I and II HPY16_16610 PF13597 Anaerobic ribonucleoside-triphosphate reductase HPY16_16610 PF03477 ATP cone domain HPY16_16620 PF13419 Haloacid dehalogenase-like hydrolase HPY16_16625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_16625 PF00672 HAMP domain HPY16_16625 PF12729 Four helix bundle sensory module for signal transduction HPY16_16630 PF03606 C4-dicarboxylate anaerobic carrier HPY16_16635 PF03315 Serine dehydratase beta chain HPY16_16635 PF03313 Serine dehydratase alpha chain HPY16_16640 PF00072 Response regulator receiver domain HPY16_16640 PF00196 Bacterial regulatory proteins, luxR family HPY16_16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_16645 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HPY16_16645 PF00672 HAMP domain HPY16_16645 PF07730 Histidine kinase HPY16_16650 PF12838 4Fe-4S dicluster domain HPY16_16650 PF13187 4Fe-4S dicluster domain HPY16_16660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY16_16660 PF01568 Molydopterin dinucleotide binding domain HPY16_16660 PF00384 Molybdopterin oxidoreductase HPY16_16665 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HPY16_16670 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY16_16680 PF01966 HD domain HPY16_16685 PF00072 Response regulator receiver domain HPY16_16685 PF00196 Bacterial regulatory proteins, luxR family HPY16_16690 PF05231 MASE1 HPY16_16690 PF07730 Histidine kinase HPY16_16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_16695 PF07690 Major Facilitator Superfamily HPY16_16705 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_16710 PF00005 ABC transporter HPY16_16710 PF08402 TOBE domain HPY16_16715 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HPY16_16725 PF02803 Thiolase, C-terminal domain HPY16_16725 PF00108 Thiolase, N-terminal domain HPY16_16730 PF00106 short chain dehydrogenase HPY16_16735 PF02355 Protein export membrane protein HPY16_16735 PF07549 SecD/SecF GG Motif HPY16_16740 PF02355 Protein export membrane protein HPY16_16740 PF07549 SecD/SecF GG Motif HPY16_16740 PF13721 SecD export protein N-terminal TM region HPY16_16755 PF17158 Membrane-associated sensor, integral membrane domain HPY16_16755 PF00990 Diguanylate cyclase, GGDEF domain HPY16_16760 PF00483 Nucleotidyl transferase HPY16_16765 PF00704 Glycosyl hydrolases family 18 HPY16_16765 PF06483 Chitinase C HPY16_16770 PF00465 Iron-containing alcohol dehydrogenase HPY16_16780 PF14532 Sigma-54 interaction domain HPY16_16780 PF00072 Response regulator receiver domain HPY16_16780 PF02954 Bacterial regulatory protein, Fis family HPY16_16785 PF02743 Cache domain HPY16_16785 PF00512 His Kinase A (phospho-acceptor) domain HPY16_16785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_16795 PF07690 Major Facilitator Superfamily HPY16_16800 PF02887 Pyruvate kinase, alpha/beta domain HPY16_16800 PF00224 Pyruvate kinase, barrel domain HPY16_16805 PF00672 HAMP domain HPY16_16805 PF01627 Hpt domain HPY16_16805 PF00072 Response regulator receiver domain HPY16_16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_16805 PF00512 His Kinase A (phospho-acceptor) domain HPY16_16805 PF17149 Periplasmic sensor domain found in signal transduction proteins HPY16_16810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY16_16815 PF02142 MGS-like domain HPY16_16820 PF00857 Isochorismatase family HPY16_16825 PF01219 Prokaryotic diacylglycerol kinase HPY16_16830 PF00580 UvrD/REP helicase N-terminal domain HPY16_16830 PF13361 UvrD-like helicase C-terminal domain HPY16_16830 PF12462 DNA helicase IV / RNA helicase N terminal HPY16_16835 PF12805 FUSC-like inner membrane protein yccS HPY16_16840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_16840 PF13188 PAS domain HPY16_16840 PF00072 Response regulator receiver domain HPY16_16840 PF08448 PAS fold HPY16_16840 PF00512 His Kinase A (phospho-acceptor) domain HPY16_16865 PF00005 ABC transporter HPY16_16865 PF03459 TOBE domain HPY16_16870 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_16880 PF07685 CobB/CobQ-like glutamine amidotransferase domain HPY16_16880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY16_16910 PF12833 Helix-turn-helix domain HPY16_16910 PF02311 AraC-like ligand binding domain HPY16_16915 PF00593 TonB dependent receptor HPY16_16915 PF07715 TonB-dependent Receptor Plug Domain HPY16_16920 PF07690 Major Facilitator Superfamily HPY16_16925 PF00501 AMP-binding enzyme HPY16_16925 PF00668 Condensation domain HPY16_16925 PF08242 Methyltransferase domain HPY16_16925 PF00550 Phosphopantetheine attachment site HPY16_16930 PF00501 AMP-binding enzyme HPY16_16930 PF00668 Condensation domain HPY16_16930 PF00550 Phosphopantetheine attachment site HPY16_16930 PF13193 AMP-binding enzyme C-terminal domain HPY16_16945 PF00425 chorismate binding enzyme HPY16_16950 PF13193 AMP-binding enzyme C-terminal domain HPY16_16950 PF00501 AMP-binding enzyme HPY16_16955 PF02028 BCCT, betaine/carnitine/choline family transporter HPY16_16960 PF13977 BetI-type transcriptional repressor, C-terminal HPY16_16960 PF00440 Bacterial regulatory proteins, tetR family HPY16_16965 PF00171 Aldehyde dehydrogenase family HPY16_16970 PF00732 GMC oxidoreductase HPY16_16970 PF05199 GMC oxidoreductase HPY16_16975 PF00005 ABC transporter HPY16_16975 PF00664 ABC transporter transmembrane region HPY16_16980 PF00664 ABC transporter transmembrane region HPY16_16980 PF00005 ABC transporter HPY16_16990 PF09308 LuxQ, periplasmic HPY16_16990 PF00072 Response regulator receiver domain HPY16_16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_16990 PF00512 His Kinase A (phospho-acceptor) domain HPY16_16995 PF13407 Periplasmic binding protein domain HPY16_17005 PF01541 GIY-YIG catalytic domain HPY16_17010 PF04337 Protein of unknown function, DUF480 HPY16_17020 PF04363 Protein of unknown function (DUF496) HPY16_17030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HPY16_17030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPY16_17035 PF00230 Major intrinsic protein HPY16_17040 PF04324 BFD-like [2Fe-2S] binding domain HPY16_17040 PF01266 FAD dependent oxidoreductase HPY16_17045 PF00890 FAD binding domain HPY16_17050 PF13183 4Fe-4S dicluster domain HPY16_17050 PF02754 Cysteine-rich domain HPY16_17055 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY16_17055 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY16_17060 PF00085 Thioredoxin HPY16_17065 PF07690 Major Facilitator Superfamily HPY16_17085 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_17090 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_17095 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_17100 PF00005 ABC transporter HPY16_17110 PF05762 VWA domain containing CoxE-like protein HPY16_17115 PF07728 AAA domain (dynein-related subfamily) HPY16_17115 PF12592 Protein of unknown function (DUF3763) HPY16_17115 PF17868 AAA lid domain HPY16_17120 PF00293 NUDIX domain HPY16_17125 PF01212 Beta-eliminating lyase HPY16_17130 PF00034 Cytochrome c HPY16_17135 PF00440 Bacterial regulatory proteins, tetR family HPY16_17135 PF08361 MAATS-type transcriptional repressor, C-terminal region HPY16_17140 PF00270 DEAD/DEAH box helicase HPY16_17140 PF00271 Helicase conserved C-terminal domain HPY16_17145 PF04336 Acyl carrier protein phosphodiesterase HPY16_17150 PF03222 Tryptophan/tyrosine permease family HPY16_17155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_17155 PF00672 HAMP domain HPY16_17160 PF16363 GDP-mannose 4,6 dehydratase HPY16_17165 PF03746 LamB/YcsF family HPY16_17170 PF02682 Carboxyltransferase domain, subdomain C and D HPY16_17175 PF02626 Carboxyltransferase domain, subdomain A and B HPY16_17185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY16_17185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY16_17195 PF00005 ABC transporter HPY16_17200 PF13472 GDSL-like Lipase/Acylhydrolase family HPY16_17205 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY16_17205 PF07055 Enoyl reductase FAD binding domain HPY16_17205 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY16_17210 PF00498 FHA domain HPY16_17210 PF00563 EAL domain HPY16_17210 PF00990 Diguanylate cyclase, GGDEF domain HPY16_17220 PF00226 DnaJ domain HPY16_17220 PF01556 DnaJ C terminal domain HPY16_17220 PF00684 DnaJ central domain HPY16_17235 PF13419 Haloacid dehalogenase-like hydrolase HPY16_17250 PF00294 pfkB family carbohydrate kinase HPY16_17260 PF00271 Helicase conserved C-terminal domain HPY16_17260 PF00270 DEAD/DEAH box helicase HPY16_17260 PF03880 DbpA RNA binding domain HPY16_17265 PF08206 Ribonuclease B OB domain HPY16_17265 PF00773 RNB domain HPY16_17265 PF00575 S1 RNA binding domain HPY16_17275 PF12849 PBP superfamily domain HPY16_17280 PF01575 MaoC like domain HPY16_17285 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HPY16_17290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HPY16_17290 PF18416 N-acetylglucosamine binding protein domain 2 HPY16_17295 PF01447 Thermolysin metallopeptidase, catalytic domain HPY16_17295 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY16_17295 PF04151 Bacterial pre-peptidase C-terminal domain HPY16_17295 PF03413 Peptidase propeptide and YPEB domain HPY16_17295 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY16_17300 PF04151 Bacterial pre-peptidase C-terminal domain HPY16_17300 PF04389 Peptidase family M28 HPY16_17305 PF00491 Arginase family HPY16_17310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY16_17310 PF17944 Arginine decarboxylase C-terminal helical extension HPY16_17310 PF17810 Arginine decarboxylase helical bundle domain HPY16_17320 PF01769 Divalent cation transporter HPY16_17320 PF00571 CBS domain HPY16_17320 PF03448 MgtE intracellular N domain HPY16_17330 PF13840 ACT domain HPY16_17330 PF00696 Amino acid kinase family HPY16_17335 PF06339 Ectoine synthase HPY16_17340 PF00202 Aminotransferase class-III HPY16_17345 PF00583 Acetyltransferase (GNAT) family HPY16_17350 PF01329 Pterin 4 alpha carbinolamine dehydratase HPY16_17355 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HPY16_17360 PF00501 AMP-binding enzyme HPY16_17360 PF13193 AMP-binding enzyme C-terminal domain HPY16_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_17380 PF03466 LysR substrate binding domain HPY16_17390 PF00892 EamA-like transporter family HPY16_17395 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HPY16_17395 PF00132 Bacterial transferase hexapeptide (six repeats) HPY16_17395 PF14602 Hexapeptide repeat of succinyl-transferase HPY16_17400 PF03471 Transporter associated domain HPY16_17400 PF00571 CBS domain HPY16_17400 PF01595 Cyclin M transmembrane N-terminal domain HPY16_17405 PF02566 OsmC-like protein HPY16_17420 PF01797 Transposase IS200 like HPY16_17450 PF02566 OsmC-like protein HPY16_17455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY16_17460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY16_17460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY16_17480 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY16_17485 PF13520 Amino acid permease HPY16_17490 PF00990 Diguanylate cyclase, GGDEF domain HPY16_17500 PF00248 Aldo/keto reductase family HPY16_17505 PF00128 Alpha amylase, catalytic domain HPY16_17515 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY16_17520 PF12262 Bacterial virulence factor lipase N-terminal HPY16_17525 PF08447 PAS fold HPY16_17525 PF13426 PAS domain HPY16_17525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_17530 PF01447 Thermolysin metallopeptidase, catalytic domain HPY16_17530 PF04151 Bacterial pre-peptidase C-terminal domain HPY16_17530 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY16_17530 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY16_17530 PF03413 Peptidase propeptide and YPEB domain HPY16_17535 PF03922 OmpW family HPY16_17545 PF00768 D-alanyl-D-alanine carboxypeptidase HPY16_17550 PF08461 Ribonuclease R winged-helix domain HPY16_17550 PF17876 Cold shock domain HPY16_17550 PF00773 RNB domain HPY16_17550 PF00575 S1 RNA binding domain HPY16_17550 PF08206 Ribonuclease B OB domain HPY16_17555 PF00313 'Cold-shock' DNA-binding domain HPY16_17565 PF00291 Pyridoxal-phosphate dependent enzyme HPY16_17570 PF03466 LysR substrate binding domain HPY16_17570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_17580 PF01979 Amidohydrolase family HPY16_17595 PF00672 HAMP domain HPY16_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_17595 PF00512 His Kinase A (phospho-acceptor) domain HPY16_17595 PF00989 PAS fold HPY16_17600 PF00072 Response regulator receiver domain HPY16_17600 PF00486 Transcriptional regulatory protein, C terminal HPY16_17620 PF00589 Phage integrase family HPY16_17620 PF12167 Arm DNA-binding domain HPY16_17635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_17635 PF03466 LysR substrate binding domain HPY16_17640 PF00107 Zinc-binding dehydrogenase HPY16_17640 PF08240 Alcohol dehydrogenase GroES-like domain HPY16_17645 PF00155 Aminotransferase class I and II HPY16_17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_17660 PF03466 LysR substrate binding domain HPY16_17665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY16_17690 PF01966 HD domain HPY16_17695 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HPY16_17695 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HPY16_17700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY16_17705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY16_17705 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HPY16_17730 PF02595 Glycerate kinase family HPY16_17735 PF02447 GntP family permease HPY16_17740 PF13556 PucR C-terminal helix-turn-helix domain HPY16_17740 PF17853 GGDEF-like domain HPY16_17740 PF05651 Putative sugar diacid recognition HPY16_17745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_17745 PF00672 HAMP domain HPY16_17750 PF01243 Pyridoxamine 5'-phosphate oxidase HPY16_17755 PF06228 Haem utilisation ChuX/HutX HPY16_17760 PF04055 Radical SAM superfamily HPY16_17765 PF03544 Gram-negative bacterial TonB protein C-terminal HPY16_17770 PF01618 MotA/TolQ/ExbB proton channel family HPY16_17775 PF02472 Biopolymer transport protein ExbD/TolR HPY16_17780 PF01497 Periplasmic binding protein HPY16_17785 PF01032 FecCD transport family HPY16_17790 PF00005 ABC transporter HPY16_17820 PF02743 Cache domain HPY16_17820 PF00672 HAMP domain HPY16_17820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_17825 PF03473 MOSC domain HPY16_17825 PF03476 MOSC N-terminal beta barrel domain HPY16_17825 PF03476 MOSC N-terminal beta barrel domain HPY16_17825 PF03473 MOSC domain HPY16_17825 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY16_17825 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY16_17830 PF01979 Amidohydrolase family HPY16_17835 PF05958 tRNA (Uracil-5-)-methyltransferase HPY16_17840 PF05661 Protein of unknown function (DUF808) HPY16_17845 PF17151 Periplasmic sensor domain HPY16_17845 PF00990 Diguanylate cyclase, GGDEF domain HPY16_17855 PF00313 'Cold-shock' DNA-binding domain HPY16_17880 PF00990 Diguanylate cyclase, GGDEF domain HPY16_17880 PF08448 PAS fold HPY16_17885 PF00455 DeoR C terminal sensor domain HPY16_17885 PF08220 DeoR-like helix-turn-helix domain HPY16_17900 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_17905 PF14785 Maltose transport system permease protein MalF P2 domain HPY16_17905 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_17910 PF01547 Bacterial extracellular solute-binding protein HPY16_17915 PF08402 TOBE domain HPY16_17915 PF00005 ABC transporter HPY16_17920 PF13302 Acetyltransferase (GNAT) domain HPY16_17935 PF01906 Putative heavy-metal-binding HPY16_17940 PF00196 Bacterial regulatory proteins, luxR family HPY16_17950 PF01584 CheW-like domain HPY16_17950 PF00072 Response regulator receiver domain HPY16_17955 PF01047 MarR family HPY16_17960 PF00990 Diguanylate cyclase, GGDEF domain HPY16_17975 PF00563 EAL domain HPY16_17975 PF00990 Diguanylate cyclase, GGDEF domain HPY16_17975 PF03707 Bacterial signalling protein N terminal repeat HPY16_17995 PF03466 LysR substrate binding domain HPY16_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_18000 PF00990 Diguanylate cyclase, GGDEF domain HPY16_18000 PF00563 EAL domain HPY16_18010 PF02678 Pirin HPY16_18010 PF05726 Pirin C-terminal cupin domain HPY16_18015 PF06865 Pyrimidine/purine nucleoside phosphorylase HPY16_18025 PF07690 Major Facilitator Superfamily HPY16_18030 PF12729 Four helix bundle sensory module for signal transduction HPY16_18030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18030 PF00672 HAMP domain HPY16_18035 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY16_18035 PF13654 AAA domain HPY16_18045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_18045 PF00005 ABC transporter HPY16_18050 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_18055 PF00672 HAMP domain HPY16_18055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18055 PF17200 Single Cache domain 2 HPY16_18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_18065 PF03466 LysR substrate binding domain HPY16_18075 PF02652 L-lactate permease HPY16_18080 PF01070 FMN-dependent dehydrogenase HPY16_18090 PF03618 Kinase/pyrophosphorylase HPY16_18095 PF00391 PEP-utilising enzyme, mobile domain HPY16_18095 PF02896 PEP-utilising enzyme, TIM barrel domain HPY16_18095 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPY16_18100 PF08447 PAS fold HPY16_18100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18105 PF01554 MatE HPY16_18120 PF03473 MOSC domain HPY16_18120 PF03475 3-alpha domain HPY16_18125 PF00270 DEAD/DEAH box helicase HPY16_18125 PF00271 Helicase conserved C-terminal domain HPY16_18130 PF03786 D-mannonate dehydratase (UxuA) HPY16_18135 PF00392 Bacterial regulatory proteins, gntR family HPY16_18135 PF07729 FCD domain HPY16_18140 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY16_18145 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY16_18150 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY16_18155 PF08125 Mannitol dehydrogenase C-terminal domain HPY16_18155 PF01232 Mannitol dehydrogenase Rossmann domain HPY16_18160 PF02614 Glucuronate isomerase HPY16_18165 PF00294 pfkB family carbohydrate kinase HPY16_18170 PF01081 KDPG and KHG aldolase HPY16_18175 PF10688 Bacterial inner membrane protein HPY16_18180 PF03466 LysR substrate binding domain HPY16_18180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_18190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY16_18200 PF00664 ABC transporter transmembrane region HPY16_18200 PF00005 ABC transporter HPY16_18210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY16_18220 PF01810 LysE type translocator HPY16_18225 PF12833 Helix-turn-helix domain HPY16_18240 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY16_18245 PF01047 MarR family HPY16_18250 PF02566 OsmC-like protein HPY16_18255 PF13609 Gram-negative porin HPY16_18260 PF00892 EamA-like transporter family HPY16_18265 PF00462 Glutaredoxin HPY16_18270 PF07670 Nucleoside recognition HPY16_18275 PF07670 Nucleoside recognition HPY16_18280 PF03600 Citrate transporter HPY16_18290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPY16_18290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY16_18305 PF07681 DoxX HPY16_18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_18310 PF03466 LysR substrate binding domain HPY16_18330 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY16_18340 PF07148 Maltose operon periplasmic protein precursor (MalM) HPY16_18345 PF02264 LamB porin HPY16_18350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY16_18350 PF00128 Alpha amylase, catalytic domain HPY16_18360 PF12729 Four helix bundle sensory module for signal transduction HPY16_18360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18360 PF00672 HAMP domain HPY16_18370 PF00672 HAMP domain HPY16_18370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18375 PF00990 Diguanylate cyclase, GGDEF domain HPY16_18375 PF05230 MASE2 domain HPY16_18385 PF00793 DAHP synthetase I family HPY16_18390 PF00005 ABC transporter HPY16_18395 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_18400 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY16_18405 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_18410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY16_18410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY16_18410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY16_18410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY16_18415 PF02378 Phosphotransferase system, EIIC HPY16_18415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY16_18415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY16_18420 PF01232 Mannitol dehydrogenase Rossmann domain HPY16_18420 PF08125 Mannitol dehydrogenase C-terminal domain HPY16_18425 PF05068 Mannitol repressor HPY16_18430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY16_18460 PF13460 NAD(P)H-binding HPY16_18465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_18465 PF03466 LysR substrate binding domain HPY16_18470 PF02743 Cache domain HPY16_18470 PF00672 HAMP domain HPY16_18470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18475 PF00106 short chain dehydrogenase HPY16_18480 PF03466 LysR substrate binding domain HPY16_18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY16_18485 PF04013 Putative SAM-dependent RNA methyltransferase HPY16_18490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY16_18500 PF13520 Amino acid permease HPY16_18505 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY16_18505 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY16_18505 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY16_18515 PF03472 Autoinducer binding domain HPY16_18515 PF00196 Bacterial regulatory proteins, luxR family HPY16_18545 PF00171 Aldehyde dehydrogenase family HPY16_18550 PF01037 Lrp/AsnC ligand binding domain HPY16_18555 PF02743 Cache domain HPY16_18555 PF00672 HAMP domain HPY16_18555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18565 PF00474 Sodium:solute symporter family HPY16_18575 PF14850 DNA-binding domain of Proline dehydrogenase HPY16_18575 PF00171 Aldehyde dehydrogenase family HPY16_18575 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HPY16_18575 PF01619 Proline dehydrogenase HPY16_18580 PF12833 Helix-turn-helix domain HPY16_18590 PF03781 Sulfatase-modifying factor enzyme 1 HPY16_18595 PF00072 Response regulator receiver domain HPY16_18595 PF00196 Bacterial regulatory proteins, luxR family HPY16_18600 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HPY16_18600 PF01243 Pyridoxamine 5'-phosphate oxidase HPY16_18605 PF00529 HlyD membrane-fusion protein of T1SS HPY16_18620 PF03412 Peptidase C39 family HPY16_18620 PF00664 ABC transporter transmembrane region HPY16_18620 PF00005 ABC transporter HPY16_18630 PF00990 Diguanylate cyclase, GGDEF domain HPY16_18630 PF00072 Response regulator receiver domain HPY16_18640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18640 PF02743 Cache domain HPY16_18640 PF00672 HAMP domain HPY16_18645 PF01339 CheB methylesterase HPY16_18645 PF00072 Response regulator receiver domain HPY16_18650 PF03975 CheD chemotactic sensory transduction HPY16_18655 PF03705 CheR methyltransferase, all-alpha domain HPY16_18655 PF01739 CheR methyltransferase, SAM binding domain HPY16_18660 PF00672 HAMP domain HPY16_18660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY16_18660 PF02203 Tar ligand binding domain homologue HPY16_18665 PF01584 CheW-like domain HPY16_18670 PF01584 CheW-like domain HPY16_18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_18675 PF01584 CheW-like domain HPY16_18675 PF09078 CheY binding HPY16_18675 PF02895 Signal transducing histidine kinase, homodimeric domain HPY16_18675 PF01627 Hpt domain HPY16_18680 PF00072 Response regulator receiver domain HPY16_18695 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_18700 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY16_18700 PF00528 Binding-protein-dependent transport system inner membrane component HPY16_18705 PF00005 ABC transporter HPY16_18705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY16_18710 PF00884 Sulfatase HPY16_18710 PF08019 Phosphoethanolamine transferase EptA/EptB HPY16_18715 PF08521 Two-component sensor kinase N-terminal HPY16_18715 PF00512 His Kinase A (phospho-acceptor) domain HPY16_18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY16_18720 PF00072 Response regulator receiver domain HPY16_18720 PF00486 Transcriptional regulatory protein, C terminal HPY16_18730 PF00106 short chain dehydrogenase HPY16_18740 PF00501 AMP-binding enzyme HPY16_18750 PF05127 Helicase HPY16_18750 PF13718 GNAT acetyltransferase 2 HPY16_18755 PF13416 Bacterial extracellular solute-binding protein