locus-tag class description VCD_000003 IPR018357 Hexapeptide transferase, conserved site VCD_000003 IPR001451 Hexapeptide repeat VCD_000003 IPR011004 Trimeric LpxA-like superfamily VCD_000004 IPR017853 Glycoside hydrolase superfamily VCD_000004 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VCD_000004 IPR006046 Alpha amylase VCD_000005 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase VCD_000005 IPR016174 Di-haem cytochrome, transmembrane VCD_000006 IPR023951 L-ascorbate-6-phosphate lactonase UlaG VCD_000006 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VCD_000007 IPR014036 DeoR C-terminal sensor domain VCD_000007 IPR037171 NagB/RpiA transferase-like VCD_000007 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VCD_000007 IPR001034 DeoR-type HTH domain VCD_000007 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000007 IPR036390 Winged helix DNA-binding domain superfamily VCD_000007 IPR023711 Transcription regulator HTH, UlaR VCD_000008 IPR004703 Phosphotransferase system, sugar-specific permease component VCD_000009 IPR016152 Phosphotransferase/anion transporter VCD_000009 IPR002178 PTS EIIA type-2 domain VCD_000010 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF VCD_000010 IPR001303 Class II aldolase/adducin N-terminal VCD_000010 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VCD_000011 IPR023214 HAD superfamily VCD_000011 IPR036412 HAD-like superfamily VCD_000011 IPR006379 HAD-superfamily hydrolase, subfamily IIB VCD_000011 IPR000150 Cof family VCD_000012 IPR001754 Orotidine 5'-phosphate decarboxylase domain VCD_000012 IPR011060 Ribulose-phosphate binding barrel VCD_000012 IPR041710 HPS/KGPDC domain VCD_000012 IPR013785 Aldolase-type TIM barrel VCD_000013 IPR013022 Xylose isomerase-like, TIM barrel domain VCD_000013 IPR036237 Xylose isomerase-like superfamily VCD_000013 IPR004560 L-ribulose-5-phosphate 3-epimerase VCD_000013 IPR001719 AP endonuclease 2 VCD_000016 IPR039420 Transcriptional regulatory protein WalR-like VCD_000016 IPR001789 Signal transduction response regulator, receiver domain VCD_000016 IPR011006 CheY-like superfamily VCD_000016 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000016 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_000017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000017 IPR006290 Heavy metal sensor kinase VCD_000017 IPR003660 HAMP domain VCD_000017 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000017 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000017 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000017 IPR005467 Histidine kinase domain VCD_000017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000020 IPR004372 Acetate/propionate kinase VCD_000020 IPR023865 Aliphatic acid kinase, short-chain, conserved site VCD_000020 IPR000890 Aliphatic acid kinase, short-chain VCD_000022 IPR011276 TonB-dependent haem/haemoglobin receptor VCD_000022 IPR000531 TonB-dependent receptor-like, beta-barrel VCD_000022 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor VCD_000022 IPR010917 TonB-dependent receptor, conserved site VCD_000022 IPR039426 Vitamin B12 transporter BtuB-like VCD_000022 IPR012910 TonB-dependent receptor, plug domain VCD_000022 IPR037066 TonB-dependent receptor, plug domain superfamily VCD_000023 IPR009057 Homeobox-like domain superfamily VCD_000023 IPR018060 DNA binding HTH domain, AraC-type VCD_000023 IPR018062 HTH domain AraC-type, conserved site VCD_000024 IPR003439 ABC transporter-like VCD_000024 IPR017871 ABC transporter, conserved site VCD_000024 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000024 IPR003593 AAA+ ATPase domain VCD_000025 IPR037294 ABC transporter, BtuC-like VCD_000025 IPR000522 ABC transporter, permease protein, BtuC-like VCD_000026 IPR000522 ABC transporter, permease protein, BtuC-like VCD_000026 IPR037294 ABC transporter, BtuC-like VCD_000030 IPR013783 Immunoglobulin-like fold VCD_000030 IPR012300 Peptidase M6, InhA VCD_000030 IPR008757 Peptidase M6-like, domain VCD_000030 IPR022409 PKD/Chitinase domain VCD_000030 IPR000601 PKD domain VCD_000030 IPR035986 PKD domain superfamily VCD_000031 IPR004961 Lipase chaperone VCD_000032 IPR029058 Alpha/Beta hydrolase fold VCD_000032 IPR000073 Alpha/beta hydrolase fold-1 VCD_000033 IPR000727 Target SNARE coiled-coil homology domain VCD_000033 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000033 IPR003660 HAMP domain VCD_000033 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_000033 IPR004090 Chemotaxis methyl-accepting receptor VCD_000034 IPR032496 Hemolysin, beta-prism lectin VCD_000034 IPR000772 Ricin B, lectin domain VCD_000034 IPR035992 Ricin B-like lectins VCD_000034 IPR036435 Leukocidin/porin MspA superfamily VCD_000034 IPR022220 Hemolytic toxin, N-terminal VCD_000034 IPR036404 Jacalin-like lectin domain superfamily VCD_000034 IPR016183 Leukocidin/Hemolysin toxin VCD_000035 IPR001087 GDSL lipase/esterase VCD_000035 IPR008265 Lipase, GDSL, active site VCD_000035 IPR036514 SGNH hydrolase superfamily VCD_000036 IPR000014 PAS domain VCD_000036 IPR000160 GGDEF domain VCD_000036 IPR013656 PAS fold-4 VCD_000036 IPR035965 PAS domain superfamily VCD_000036 IPR000700 PAS-associated, C-terminal VCD_000036 IPR029787 Nucleotide cyclase VCD_000039 IPR036259 MFS transporter superfamily VCD_000039 IPR004734 Multidrug resistance protein VCD_000039 IPR020846 Major facilitator superfamily domain VCD_000039 IPR011701 Major facilitator superfamily VCD_000040 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VCD_000042 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000042 IPR005467 Histidine kinase domain VCD_000042 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000042 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000042 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_000042 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000042 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000043 IPR001789 Signal transduction response regulator, receiver domain VCD_000043 IPR011006 CheY-like superfamily VCD_000043 IPR021800 Domain of unknown function DUF3369 VCD_000043 IPR003607 HD/PDEase domain VCD_000043 IPR037522 HD-GYP domain VCD_000044 IPR004821 Cytidyltransferase-like domain VCD_000044 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_000044 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase VCD_000045 IPR003694 NAD(+) synthetase VCD_000045 IPR022926 NH(3)-dependent NAD(+) synthetase VCD_000045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_000045 IPR022310 NAD/GMP synthase VCD_000046 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VCD_000047 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_000047 IPR028622 ATP-dependent RNA helicase RhlE VCD_000047 IPR011545 DEAD/DEAH box helicase domain VCD_000047 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_000047 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_000047 IPR001650 Helicase, C-terminal VCD_000047 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000048 IPR036515 Transposase IS200-like superfamily VCD_000048 IPR002686 Transposase IS200-like VCD_000052 IPR001525 C-5 cytosine methyltransferase VCD_000052 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_000053 IPR013785 Aldolase-type TIM barrel VCD_000053 IPR005993 GMP reductase VCD_000053 IPR001093 IMP dehydrogenase/GMP reductase VCD_000053 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VCD_000055 IPR013099 Potassium channel domain VCD_000055 IPR028325 Voltage-gated potassium channel VCD_000057 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCD_000057 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCD_000057 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VCD_000057 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VCD_000057 IPR036291 NAD(P)-binding domain superfamily VCD_000058 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr VCD_000058 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase VCD_000058 IPR017953 Carbohydrate kinase, predicted, conserved site VCD_000058 IPR004443 YjeF N-terminal domain VCD_000058 IPR029056 Ribokinase-like VCD_000058 IPR036652 YjeF N-terminal domain superfamily VCD_000060 IPR011006 CheY-like superfamily VCD_000060 IPR001789 Signal transduction response regulator, receiver domain VCD_000064 IPR005589 Alternative ribosome-rescue factor A VCD_000065 IPR012340 Nucleic acid-binding, OB-fold VCD_000065 IPR002059 Cold-shock protein, DNA-binding VCD_000065 IPR011129 Cold shock domain VCD_000065 IPR012156 Cold shock, CspA VCD_000066 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VCD_000066 IPR017927 FAD-binding domain, ferredoxin reductase-type VCD_000066 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VCD_000066 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VCD_000066 IPR000971 Globin VCD_000066 IPR012292 Globin/Protoglobin VCD_000066 IPR023950 Flavohemoprotein VCD_000066 IPR009050 Globin-like superfamily VCD_000066 IPR001433 Oxidoreductase FAD/NAD(P)-binding VCD_000066 IPR017938 Riboflavin synthase-like beta-barrel VCD_000067 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_000067 IPR025944 Sigma-54 interaction domain, conserved site VCD_000067 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_000067 IPR003593 AAA+ ATPase domain VCD_000067 IPR003018 GAF domain VCD_000067 IPR029016 GAF-like domain superfamily VCD_000067 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_000067 IPR009057 Homeobox-like domain superfamily VCD_000067 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000070 IPR010161 Peptidase M20B, tripeptide aminopeptidase VCD_000070 IPR011650 Peptidase M20, dimerisation domain VCD_000070 IPR002933 Peptidase M20 VCD_000070 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VCD_000070 IPR036264 Bacterial exopeptidase dimerisation domain VCD_000071 IPR008276 Concentrative nucleoside transporter VCD_000071 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VCD_000071 IPR002668 Concentrative nucleoside transporter N-terminal domain VCD_000071 IPR011657 Concentrative nucleoside transporter C-terminal domain VCD_000071 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VCD_000074 IPR033479 Double Cache domain 1 VCD_000074 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000074 IPR003660 HAMP domain VCD_000075 IPR011703 ATPase, AAA-3 VCD_000075 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000075 IPR041628 ChlI/MoxR, AAA lid domain VCD_000076 IPR002881 Domain of unknown function DUF58 VCD_000076 IPR036465 von Willebrand factor A-like domain superfamily VCD_000079 IPR002035 von Willebrand factor, type A VCD_000079 IPR022933 Uncharacterised protein family UPF0353 VCD_000079 IPR024163 Aerotolerance regulator, N-terminal VCD_000079 IPR036465 von Willebrand factor A-like domain superfamily VCD_000082 IPR019844 Cold-shock (CSD) domain VCD_000082 IPR012156 Cold shock, CspA VCD_000082 IPR012340 Nucleic acid-binding, OB-fold VCD_000082 IPR002059 Cold-shock protein, DNA-binding VCD_000082 IPR011129 Cold shock domain VCD_000083 IPR013656 PAS fold-4 VCD_000083 IPR035965 PAS domain superfamily VCD_000083 IPR000014 PAS domain VCD_000083 IPR029787 Nucleotide cyclase VCD_000083 IPR000160 GGDEF domain VCD_000083 IPR001633 EAL domain VCD_000083 IPR035919 EAL domain superfamily VCD_000085 IPR024530 Putative quorum-sensing-regulated virulence factor VCD_000086 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VCD_000086 IPR011166 Beta-eliminating lyase family VCD_000086 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000086 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000086 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000086 IPR013440 Tryptophanase VCD_000086 IPR018176 Tryptophanase, conserved site VCD_000087 IPR013059 Tryptophan/tyrosine transporter VCD_000087 IPR013061 Tryptophan/tryrosine permease, conserved site VCD_000087 IPR018227 Amino acid/polyamine transporter 2 VCD_000088 IPR006016 UspA VCD_000090 IPR005663 Monovalent cation proton antiporter subunit A VCD_000090 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup VCD_000090 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit VCD_000090 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal VCD_000090 IPR025383 Domain of unknown function DUF4040 VCD_000094 IPR007208 Na(+)/H(+) antiporter subunit F-like VCD_000095 IPR005133 Na+/H+ antiporter subunit G VCD_000097 IPR036821 Peptide deformylase superfamily VCD_000097 IPR023635 Peptide deformylase VCD_000099 IPR019503 Peptidase M66 domain VCD_000099 IPR036116 Fibronectin type III superfamily VCD_000099 IPR003961 Fibronectin type III VCD_000099 IPR022218 ToxR activated gene A lipoprotein domain VCD_000099 IPR013783 Immunoglobulin-like fold VCD_000100 IPR006076 FAD dependent oxidoreductase VCD_000100 IPR030862 L-2-hydroxyglutarate dehydrogenase VCD_000100 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_000104 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_000104 IPR001789 Signal transduction response regulator, receiver domain VCD_000104 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_000104 IPR003593 AAA+ ATPase domain VCD_000104 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000104 IPR025944 Sigma-54 interaction domain, conserved site VCD_000104 IPR002197 DNA binding HTH domain, Fis-type VCD_000104 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_000104 IPR011006 CheY-like superfamily VCD_000104 IPR009057 Homeobox-like domain superfamily VCD_000105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000105 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VCD_000105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000105 IPR029151 Periplasmic sensor-like domain superfamily VCD_000105 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000105 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000105 IPR005467 Histidine kinase domain VCD_000105 IPR033479 Double Cache domain 1 VCD_000105 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000108 IPR011701 Major facilitator superfamily VCD_000108 IPR020846 Major facilitator superfamily domain VCD_000108 IPR036259 MFS transporter superfamily VCD_000108 IPR021159 Glycerate/sugar phosphate transporter, conserved site VCD_000108 IPR000849 Sugar phosphate transporter VCD_000108 IPR005267 Glycerol-3-phosphate transporter VCD_000109 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily VCD_000109 IPR030395 Glycerophosphodiester phosphodiesterase domain VCD_000111 IPR000845 Nucleoside phosphorylase domain VCD_000111 IPR018016 Nucleoside phosphorylase, conserved site VCD_000111 IPR010058 Uridine phosphorylase VCD_000111 IPR035994 Nucleoside phosphorylase superfamily VCD_000114 IPR000843 LacI-type HTH domain VCD_000114 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_000114 IPR028082 Periplasmic binding protein-like I VCD_000115 IPR002139 Ribokinase/fructokinase VCD_000115 IPR029056 Ribokinase-like VCD_000115 IPR011877 Ribokinase VCD_000115 IPR011611 Carbohydrate kinase PfkB VCD_000115 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VCD_000116 IPR028082 Periplasmic binding protein-like I VCD_000116 IPR025997 Periplasmic binding protein VCD_000117 IPR001851 ABC transporter, permease VCD_000118 IPR003593 AAA+ ATPase domain VCD_000118 IPR003439 ABC transporter-like VCD_000118 IPR017871 ABC transporter, conserved site VCD_000118 IPR015861 ABC transporter, ribose import, RbsA VCD_000118 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000119 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU VCD_000119 IPR023750 RbsD-like superfamily VCD_000119 IPR023064 D-ribose pyranase VCD_000122 IPR037026 Vgr protein, OB-fold domain superfamily VCD_000122 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VCD_000122 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VCD_000122 IPR006531 Gp5 N-terminal VCD_000122 IPR032074 Actin cross-linking domain VCD_000128 IPR003593 AAA+ ATPase domain VCD_000128 IPR003959 ATPase, AAA-type, core VCD_000128 IPR017729 Type VI secretion system, ATPase ClpV1 VCD_000128 IPR019489 Clp ATPase, C-terminal VCD_000128 IPR036628 Clp, N-terminal domain superfamily VCD_000128 IPR004176 Clp, N-terminal VCD_000128 IPR001270 ClpA/B family VCD_000128 IPR018368 ClpA/B, conserved site 1 VCD_000128 IPR041546 ClpA/ClpB, AAA lid domain VCD_000128 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000140 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_000140 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_000140 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VCD_000140 IPR006225 Pseudouridine synthase, RluC/RluD VCD_000141 IPR011547 SLC26A/SulP transporter domain VCD_000141 IPR036513 STAS domain superfamily VCD_000141 IPR002645 STAS domain VCD_000141 IPR001902 SLC26A/SulP transporter VCD_000142 IPR036412 HAD-like superfamily VCD_000142 IPR006439 HAD hydrolase, subfamily IA VCD_000142 IPR041492 Haloacid dehalogenase-like hydrolase VCD_000142 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VCD_000142 IPR023214 HAD superfamily VCD_000142 IPR010976 Beta-phosphoglucomutase hydrolase VCD_000143 IPR001633 EAL domain VCD_000143 IPR035919 EAL domain superfamily VCD_000143 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000143 IPR000792 Transcription regulator LuxR, C-terminal VCD_000143 IPR016032 Signal transduction response regulator, C-terminal effector VCD_000144 IPR001763 Rhodanese-like domain VCD_000144 IPR023695 Thiosulfate sulfurtransferase, bacterial VCD_000144 IPR036873 Rhodanese-like domain superfamily VCD_000145 IPR036291 NAD(P)-binding domain superfamily VCD_000145 IPR000683 Oxidoreductase, N-terminal VCD_000145 IPR004104 Oxidoreductase, C-terminal VCD_000146 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal VCD_000146 IPR007229 Nicotinate phosphoribosyltransferase family VCD_000146 IPR006406 Nicotinate phosphoribosyltransferase VCD_000146 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain VCD_000146 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase VCD_000148 IPR027268 Peptidase M4/M1, CTD superfamily VCD_000148 IPR001570 Peptidase M4, C-terminal VCD_000148 IPR013856 Peptidase M4 domain VCD_000148 IPR006644 Dystroglycan-type cadherin-like VCD_000148 IPR015919 Cadherin-like superfamily VCD_000148 IPR011096 FTP domain VCD_000148 IPR008979 Galactose-binding-like domain superfamily VCD_000148 IPR013783 Immunoglobulin-like fold VCD_000148 IPR002884 P domain VCD_000148 IPR023612 Peptidase M4 VCD_000151 IPR002852 Uncharacterised protein family UPF0251 VCD_000153 IPR034703 Proton/glutamate-aspartate symporter GltP VCD_000153 IPR033380 Glutamate-aspartate symport protein GltP/GltT VCD_000153 IPR036458 Sodium:dicarboxylate symporter superfamily VCD_000153 IPR018107 Sodium:dicarboxylate symporter, conserved site VCD_000153 IPR001991 Sodium:dicarboxylate symporter VCD_000157 IPR009061 Putative DNA-binding domain superfamily VCD_000157 IPR000551 MerR-type HTH domain VCD_000157 IPR010211 Redox-sensitive transcriptional activator SoxR VCD_000157 IPR015358 Transcription regulator MerR, DNA binding VCD_000158 IPR004734 Multidrug resistance protein VCD_000158 IPR036259 MFS transporter superfamily VCD_000158 IPR020846 Major facilitator superfamily domain VCD_000158 IPR011701 Major facilitator superfamily VCD_000159 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000159 IPR000847 Transcription regulator HTH, LysR VCD_000159 IPR036390 Winged helix DNA-binding domain superfamily VCD_000159 IPR005119 LysR, substrate-binding VCD_000160 IPR035919 EAL domain superfamily VCD_000160 IPR035965 PAS domain superfamily VCD_000160 IPR000014 PAS domain VCD_000160 IPR005330 MHYT domain VCD_000160 IPR000160 GGDEF domain VCD_000160 IPR001633 EAL domain VCD_000160 IPR029787 Nucleotide cyclase VCD_000161 IPR013731 Opacity-associated protein A, N-terminal VCD_000161 IPR011055 Duplicated hybrid motif VCD_000161 IPR018392 LysM domain VCD_000161 IPR016047 Peptidase M23 VCD_000163 IPR001902 SLC26A/SulP transporter VCD_000163 IPR036513 STAS domain superfamily VCD_000163 IPR011547 SLC26A/SulP transporter domain VCD_000163 IPR002645 STAS domain VCD_000166 IPR029787 Nucleotide cyclase VCD_000166 IPR005330 MHYT domain VCD_000166 IPR000160 GGDEF domain VCD_000166 IPR035919 EAL domain superfamily VCD_000166 IPR001633 EAL domain VCD_000167 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000167 IPR003593 AAA+ ATPase domain VCD_000167 IPR003439 ABC transporter-like VCD_000167 IPR015850 ABC transporter, phosphate import, PstB VCD_000167 IPR005670 Phosphate transport system permease protein 1 VCD_000167 IPR017871 ABC transporter, conserved site VCD_000168 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000168 IPR035906 MetI-like superfamily VCD_000168 IPR005672 Phosphate transport system permease protein PstA VCD_000169 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000169 IPR035906 MetI-like superfamily VCD_000169 IPR011864 Phosphate ABC transporter, permease protein PstC VCD_000170 IPR011862 Phosphate binding protein VCD_000170 IPR024370 PBP domain VCD_000171 IPR003660 HAMP domain VCD_000171 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_000171 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000171 IPR000727 Target SNARE coiled-coil homology domain VCD_000171 IPR004090 Chemotaxis methyl-accepting receptor VCD_000175 IPR010917 TonB-dependent receptor, conserved site VCD_000175 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VCD_000175 IPR010105 TonB-dependent siderophore receptor VCD_000175 IPR000531 TonB-dependent receptor-like, beta-barrel VCD_000175 IPR037066 TonB-dependent receptor, plug domain superfamily VCD_000175 IPR039426 Vitamin B12 transporter BtuB-like VCD_000175 IPR012910 TonB-dependent receptor, plug domain VCD_000175 IPR010916 TonB box, conserved site VCD_000176 IPR002471 Peptidase S9, serine active site VCD_000176 IPR002470 Peptidase S9A, prolyl oligopeptidase VCD_000176 IPR029058 Alpha/Beta hydrolase fold VCD_000176 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain VCD_000176 IPR023302 Peptidase S9A, N-terminal domain VCD_000177 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_000177 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000177 IPR001650 Helicase, C-terminal VCD_000177 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_000177 IPR028622 ATP-dependent RNA helicase RhlE VCD_000177 IPR011545 DEAD/DEAH box helicase domain VCD_000177 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_000180 IPR038063 L,D-transpeptidase catalytic domain-like VCD_000180 IPR018392 LysM domain VCD_000180 IPR005490 L,D-transpeptidase catalytic domain VCD_000180 IPR041597 L,D-transpeptidase C-terminal domain VCD_000181 IPR002081 Cryptochrome/DNA photolyase class 1 VCD_000181 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VCD_000181 IPR006050 DNA photolyase, N-terminal VCD_000181 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_000181 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VCD_000181 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily VCD_000181 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VCD_000182 IPR000551 MerR-type HTH domain VCD_000182 IPR009061 Putative DNA-binding domain superfamily VCD_000183 IPR013560 Domain of unknown function DUF1722 VCD_000184 IPR035994 Nucleoside phosphorylase superfamily VCD_000184 IPR000845 Nucleoside phosphorylase domain VCD_000184 IPR018016 Nucleoside phosphorylase, conserved site VCD_000184 IPR004402 Purine nucleoside phosphorylase DeoD-type VCD_000187 IPR000160 GGDEF domain VCD_000187 IPR029787 Nucleotide cyclase VCD_000188 IPR011223 Uncharacterised conserved protein UCP028770 VCD_000189 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCD_000192 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VCD_000192 IPR009875 PilZ domain VCD_000192 IPR012349 FMN-binding split barrel VCD_000193 IPR004445 Sodium/glutamate symport carrier protein GltS VCD_000196 IPR003782 Copper chaperone SCO1/SenC VCD_000196 IPR036249 Thioredoxin-like superfamily VCD_000198 IPR036458 Sodium:dicarboxylate symporter superfamily VCD_000198 IPR001991 Sodium:dicarboxylate symporter VCD_000198 IPR023025 Serine/threonine transporter SstT VCD_000199 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VCD_000199 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VCD_000203 IPR003660 HAMP domain VCD_000203 IPR004090 Chemotaxis methyl-accepting receptor VCD_000203 IPR033479 Double Cache domain 1 VCD_000203 IPR000727 Target SNARE coiled-coil homology domain VCD_000203 IPR029151 Periplasmic sensor-like domain superfamily VCD_000203 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000206 IPR022409 PKD/Chitinase domain VCD_000206 IPR011583 Chitinase II VCD_000206 IPR013783 Immunoglobulin-like fold VCD_000206 IPR017853 Glycoside hydrolase superfamily VCD_000206 IPR001579 Glycoside hydrolase, chitinase active site VCD_000206 IPR001223 Glycoside hydrolase family 18, catalytic domain VCD_000206 IPR013540 Chitinase A N-terminal VCD_000206 IPR029070 Chitinase insertion domain superfamily VCD_000206 IPR002126 Cadherin-like VCD_000206 IPR003610 Carbohydrate-binding module family 5/12 VCD_000206 IPR036573 Carbohydrate-binding module superfamily 5/12 VCD_000206 IPR014756 Immunoglobulin E-set VCD_000207 IPR018635 Uncharacterised protein family UPF0319 VCD_000208 IPR001898 Solute carrier family 13 VCD_000208 IPR031312 Sodium/sulphate symporter, conserved site VCD_000210 IPR001608 Alanine racemase, N-terminal VCD_000210 IPR011248 Serine/alanine racemase VCD_000210 IPR011079 Alanine racemase, C-terminal VCD_000210 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VCD_000210 IPR000821 Alanine racemase VCD_000210 IPR002656 Acyltransferase 3 VCD_000210 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VCD_000210 IPR029066 PLP-binding barrel VCD_000215 IPR037026 Vgr protein, OB-fold domain superfamily VCD_000215 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VCD_000215 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VCD_000215 IPR006531 Gp5 N-terminal VCD_000215 IPR032074 Actin cross-linking domain VCD_000216 IPR008514 Type VI secretion system effector, Hcp VCD_000216 IPR036624 Hcp1-like superfamily VCD_000217 IPR013783 Immunoglobulin-like fold VCD_000217 IPR014756 Immunoglobulin E-set VCD_000217 IPR017853 Glycoside hydrolase superfamily VCD_000217 IPR013780 Glycosyl hydrolase, all-beta VCD_000217 IPR004193 Glycoside hydrolase, family 13, N-terminal VCD_000217 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VCD_000217 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB VCD_000217 IPR037439 1,4-alpha-glucan-branching enzyme VCD_000217 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta VCD_000218 IPR003385 Glycoside hydrolase, family 77 VCD_000218 IPR017853 Glycoside hydrolase superfamily VCD_000219 IPR011833 Glycogen/starch/alpha-glucan phosphorylase VCD_000219 IPR000811 Glycosyl transferase, family 35 VCD_000219 IPR035090 Phosphorylase pyridoxal-phosphate attachment site VCD_000220 IPR000792 Transcription regulator LuxR, C-terminal VCD_000220 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000220 IPR041617 MalT-like TPR region VCD_000220 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_000220 IPR016032 Signal transduction response regulator, C-terminal effector VCD_000220 IPR023768 Transcriptional regulator HTH-type, MalT VCD_000220 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000221 IPR021230 Protein of unknown function DUF2810 VCD_000222 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000222 IPR033480 Single Cache domain 2 VCD_000222 IPR003660 HAMP domain VCD_000222 IPR004090 Chemotaxis methyl-accepting receptor VCD_000222 IPR000727 Target SNARE coiled-coil homology domain VCD_000223 IPR036291 NAD(P)-binding domain superfamily VCD_000223 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VCD_000223 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VCD_000223 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_000223 IPR015815 3-hydroxyisobutyrate dehydrogenase-related VCD_000223 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain VCD_000223 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site VCD_000224 IPR029072 YebC-like VCD_000224 IPR026564 Transcriptional regulator TACO1-like, domain 3 VCD_000224 IPR017856 Integrase-like, N-terminal VCD_000224 IPR002876 Transcriptional regulator TACO1-like VCD_000229 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000229 IPR025669 AAA domain VCD_000229 IPR041250 ParA helix turn helix domain VCD_000230 IPR014884 ParB protein family, C-terminal VCD_000230 IPR036086 ParB/Sulfiredoxin superfamily VCD_000230 IPR003115 ParB/Sulfiredoxin VCD_000230 IPR004437 ParB/RepB/Spo0J partition protein VCD_000231 IPR006059 Bacterial extracellular solute-binding protein VCD_000231 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VCD_000232 IPR000182 GNAT domain VCD_000232 IPR007807 Helicase domain VCD_000232 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000232 IPR032672 TmcA/NAT10/Kre33 VCD_000232 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA VCD_000232 IPR016181 Acyl-CoA N-acyltransferase VCD_000234 IPR000873 AMP-dependent synthetase/ligase VCD_000234 IPR020845 AMP-binding, conserved site VCD_000234 IPR042099 AMP-dependent synthetase-like superfamily VCD_000238 IPR039420 Transcriptional regulatory protein WalR-like VCD_000238 IPR011006 CheY-like superfamily VCD_000238 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_000238 IPR001789 Signal transduction response regulator, receiver domain VCD_000238 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000239 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000239 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000239 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000239 IPR005467 Histidine kinase domain VCD_000239 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000239 IPR013727 Two-component sensor kinase, N-terminal VCD_000239 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000241 IPR017850 Alkaline-phosphatase-like, core domain superfamily VCD_000241 IPR012549 Phosphoethanolamine transferase, N-terminal VCD_000241 IPR000917 Sulfatase, N-terminal VCD_000241 IPR040423 Phosphoethanolamine transferase VCD_000242 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_000242 IPR003439 ABC transporter-like VCD_000242 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000242 IPR003593 AAA+ ATPase domain VCD_000242 IPR017871 ABC transporter, conserved site VCD_000243 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000243 IPR035906 MetI-like superfamily VCD_000243 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCD_000244 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000244 IPR035906 MetI-like superfamily VCD_000244 IPR014156 Nickel ABC transporter, permease subunit NikB VCD_000247 IPR001789 Signal transduction response regulator, receiver domain VCD_000247 IPR011006 CheY-like superfamily VCD_000248 IPR036061 CheW-like domain superfamily VCD_000248 IPR002545 CheW-like domain VCD_000248 IPR035891 CheY-binding domain of CheA VCD_000248 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000248 IPR005467 Histidine kinase domain VCD_000248 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000248 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_000248 IPR015162 CheY binding VCD_000248 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily VCD_000248 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000248 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000248 IPR004105 Histidine kinase CheA-like, homodimeric domain VCD_000248 IPR036641 HPT domain superfamily VCD_000249 IPR002545 CheW-like domain VCD_000249 IPR036061 CheW-like domain superfamily VCD_000249 IPR039315 Chemotaxis protein CheW VCD_000250 IPR039315 Chemotaxis protein CheW VCD_000250 IPR036061 CheW-like domain superfamily VCD_000250 IPR002545 CheW-like domain VCD_000251 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily VCD_000251 IPR004090 Chemotaxis methyl-accepting receptor VCD_000251 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site VCD_000251 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000251 IPR003660 HAMP domain VCD_000251 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding VCD_000252 IPR000780 MCP methyltransferase, CheR-type VCD_000252 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_000252 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VCD_000252 IPR026024 Chemotaxis protein methyltransferase CheR VCD_000252 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VCD_000252 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCD_000253 IPR011324 Cytotoxic necrotizing factor-like, catalytic VCD_000253 IPR005659 Chemoreceptor glutamine deamidase CheD VCD_000253 IPR038592 CheD-like superfamily VCD_000254 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VCD_000254 IPR011006 CheY-like superfamily VCD_000254 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type VCD_000254 IPR001789 Signal transduction response regulator, receiver domain VCD_000254 IPR035909 Methylesterase CheB, C-terminal VCD_000255 IPR003660 HAMP domain VCD_000255 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000255 IPR033479 Double Cache domain 1 VCD_000255 IPR029151 Periplasmic sensor-like domain superfamily VCD_000255 IPR000727 Target SNARE coiled-coil homology domain VCD_000257 IPR039420 Transcriptional regulatory protein WalR-like VCD_000257 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000257 IPR001789 Signal transduction response regulator, receiver domain VCD_000257 IPR011006 CheY-like superfamily VCD_000257 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_000257 IPR016032 Signal transduction response regulator, C-terminal effector VCD_000259 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_000259 IPR003439 ABC transporter-like VCD_000259 IPR017871 ABC transporter, conserved site VCD_000259 IPR010132 ATPase, type I secretion system, HlyB VCD_000259 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000259 IPR011527 ABC transporter type 1, transmembrane domain VCD_000259 IPR003593 AAA+ ATPase domain VCD_000259 IPR039395 Peptidase C39-like A VCD_000259 IPR005074 Peptidase C39, bacteriocin processing VCD_000259 IPR039421 Type I protein exporter VCD_000262 IPR010129 Type I secretion membrane fusion protein, HlyD family VCD_000262 IPR006144 Secretion protein HlyD, conserved site VCD_000263 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal VCD_000263 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site VCD_000263 IPR012349 FMN-binding split barrel VCD_000263 IPR000659 Pyridoxamine 5'-phosphate oxidase VCD_000263 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative VCD_000264 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000264 IPR000792 Transcription regulator LuxR, C-terminal VCD_000264 IPR001789 Signal transduction response regulator, receiver domain VCD_000264 IPR016032 Signal transduction response regulator, C-terminal effector VCD_000264 IPR011006 CheY-like superfamily VCD_000265 IPR042095 Sulfatase-modifying factor enzyme superfamily VCD_000265 IPR005532 Sulfatase-modifying factor enzyme VCD_000265 IPR016187 C-type lectin fold VCD_000268 IPR018060 DNA binding HTH domain, AraC-type VCD_000268 IPR018062 HTH domain AraC-type, conserved site VCD_000268 IPR011051 RmlC-like cupin domain superfamily VCD_000268 IPR014710 RmlC-like jelly roll fold VCD_000268 IPR009057 Homeobox-like domain superfamily VCD_000268 IPR020449 Transcription regulator HTH, AraC- type VCD_000269 IPR029041 FAD-linked oxidoreductase-like VCD_000269 IPR016161 Aldehyde/histidinol dehydrogenase VCD_000269 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_000269 IPR016160 Aldehyde dehydrogenase, cysteine active site VCD_000269 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VCD_000269 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_000269 IPR015590 Aldehyde dehydrogenase domain VCD_000269 IPR013321 Arc-type ribbon-helix-helix VCD_000269 IPR025703 Bifunctional protein PutA VCD_000269 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 VCD_000269 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain VCD_000269 IPR024089 Proline dehydrogenase PutA, domain I/II VCD_000269 IPR024090 Proline dehydrogenase PutA, domain I VCD_000269 IPR010985 Ribbon-helix-helix VCD_000269 IPR002872 Proline dehydrogenase domain VCD_000269 IPR024082 Proline dehydrogenase PutA, domain II VCD_000271 IPR018212 Sodium/solute symporter, conserved site VCD_000271 IPR011851 Sodium/proline symporter VCD_000271 IPR038377 Sodium/glucose symporter superfamily VCD_000271 IPR001734 Sodium/solute symporter VCD_000273 IPR033479 Double Cache domain 1 VCD_000273 IPR003660 HAMP domain VCD_000273 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000273 IPR029151 Periplasmic sensor-like domain superfamily VCD_000273 IPR000727 Target SNARE coiled-coil homology domain VCD_000273 IPR004090 Chemotaxis methyl-accepting receptor VCD_000274 IPR000485 AsnC-type HTH domain VCD_000274 IPR011008 Dimeric alpha-beta barrel VCD_000274 IPR019888 Transcription regulator AsnC-type VCD_000274 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCD_000274 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VCD_000274 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000274 IPR036390 Winged helix DNA-binding domain superfamily VCD_000274 IPR011991 ArsR-like helix-turn-helix domain VCD_000275 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VCD_000275 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_000275 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent VCD_000275 IPR015590 Aldehyde dehydrogenase domain VCD_000275 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_000275 IPR016161 Aldehyde/histidinol dehydrogenase VCD_000277 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VCD_000277 IPR027568 Ornithine decarboxylase SpeF VCD_000277 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VCD_000277 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily VCD_000277 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000277 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000277 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000277 IPR027464 Ornithine decarboxylase, N-terminal VCD_000277 IPR011006 CheY-like superfamily VCD_000277 IPR011193 Ornithine/lysine/arginine decarboxylase VCD_000277 IPR000310 Orn/Lys/Arg decarboxylase, major domain VCD_000278 IPR002293 Amino acid/polyamine transporter I VCD_000278 IPR004754 Amino acid antiporter VCD_000278 IPR027566 Putrescine transporter PotE VCD_000280 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VCD_000280 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VCD_000281 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY VCD_000281 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCD_000281 IPR029028 Alpha/beta knot methyltransferases VCD_000282 IPR000847 Transcription regulator HTH, LysR VCD_000282 IPR036390 Winged helix DNA-binding domain superfamily VCD_000282 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000282 IPR005119 LysR, substrate-binding VCD_000283 IPR002347 Short-chain dehydrogenase/reductase SDR VCD_000283 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_000283 IPR036291 NAD(P)-binding domain superfamily VCD_000284 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000284 IPR033479 Double Cache domain 1 VCD_000284 IPR003660 HAMP domain VCD_000285 IPR036390 Winged helix DNA-binding domain superfamily VCD_000285 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000285 IPR005119 LysR, substrate-binding VCD_000285 IPR000847 Transcription regulator HTH, LysR VCD_000286 IPR036291 NAD(P)-binding domain superfamily VCD_000286 IPR016040 NAD(P)-binding domain VCD_000292 IPR036291 NAD(P)-binding domain superfamily VCD_000292 IPR000683 Oxidoreductase, N-terminal VCD_000293 IPR007761 Mannitol repressor MtlR-like VCD_000293 IPR038026 MtlR-like superfamily VCD_000294 IPR023027 Mannitol dehydrogenase, conserved site VCD_000294 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VCD_000294 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_000294 IPR036291 NAD(P)-binding domain superfamily VCD_000294 IPR013131 Mannitol dehydrogenase, N-terminal VCD_000294 IPR023028 Mannitol-1-phosphate 5-dehydrogenase VCD_000294 IPR000669 Mannitol dehydrogenase VCD_000294 IPR013118 Mannitol dehydrogenase, C-terminal VCD_000295 IPR029503 Phosphotransferase system EIIB component, mannitol-specific VCD_000295 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VCD_000295 IPR036095 PTS system IIB component-like superfamily VCD_000295 IPR016152 Phosphotransferase/anion transporter VCD_000295 IPR003352 Phosphotransferase system, EIIC VCD_000295 IPR013014 Phosphotransferase system, EIIC component, type 2 VCD_000295 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC VCD_000295 IPR002178 PTS EIIA type-2 domain VCD_000295 IPR013011 Phosphotransferase system, EIIB component, type 2 VCD_000297 IPR016047 Peptidase M23 VCD_000297 IPR011055 Duplicated hybrid motif VCD_000297 IPR007340 Opacity-associated protein A VCD_000299 IPR005841 Alpha-D-phosphohexomutase superfamily VCD_000299 IPR016066 Alpha-D-phosphohexomutase, conserved site VCD_000299 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VCD_000299 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VCD_000299 IPR005843 Alpha-D-phosphohexomutase, C-terminal VCD_000299 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VCD_000299 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VCD_000299 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VCD_000300 IPR035906 MetI-like superfamily VCD_000300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000300 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_000301 IPR001320 Ionotropic glutamate receptor VCD_000301 IPR018313 Solute-binding protein family 3, conserved site VCD_000301 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_000301 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VCD_000302 IPR035906 MetI-like superfamily VCD_000302 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000302 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_000303 IPR003439 ABC transporter-like VCD_000303 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VCD_000303 IPR003593 AAA+ ATPase domain VCD_000303 IPR017871 ABC transporter, conserved site VCD_000303 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000304 IPR006219 DHAP synthase, class 1 VCD_000304 IPR013785 Aldolase-type TIM barrel VCD_000304 IPR006218 DAHP synthetase I/KDSA VCD_000306 IPR003660 HAMP domain VCD_000306 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000310 IPR003660 HAMP domain VCD_000310 IPR004090 Chemotaxis methyl-accepting receptor VCD_000310 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000310 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_000310 IPR000727 Target SNARE coiled-coil homology domain VCD_000312 IPR013783 Immunoglobulin-like fold VCD_000312 IPR017853 Glycoside hydrolase superfamily VCD_000312 IPR004193 Glycoside hydrolase, family 13, N-terminal VCD_000312 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VCD_000312 IPR011837 Glycogen debranching enzyme, GlgX type VCD_000312 IPR013780 Glycosyl hydrolase, all-beta VCD_000312 IPR014756 Immunoglobulin E-set VCD_000313 IPR023738 Maltoporin VCD_000313 IPR003192 Porin, LamB-type VCD_000313 IPR036998 Porin, LamB-type superfamily VCD_000314 IPR010794 Maltose operon periplasmic VCD_000316 IPR004547 Glucosamine-6-phosphate isomerase VCD_000316 IPR018321 Glucosamine-6-phosphate isomerase, conserved site VCD_000316 IPR037171 NagB/RpiA transferase-like VCD_000316 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VCD_000320 IPR036390 Winged helix DNA-binding domain superfamily VCD_000320 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000320 IPR020890 Transcription regulator HTH, HdfR VCD_000320 IPR005119 LysR, substrate-binding VCD_000320 IPR000847 Transcription regulator HTH, LysR VCD_000321 IPR032808 DoxX family VCD_000322 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VCD_000322 IPR003265 HhH-GPD domain VCD_000322 IPR011257 DNA glycosylase VCD_000322 IPR000035 Alkylbase DNA glycosidase, conserved site VCD_000322 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VCD_000322 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VCD_000323 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily VCD_000323 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000323 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain VCD_000323 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain VCD_000323 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VCD_000323 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site VCD_000323 IPR023546 Methylated-DNA--protein-cysteine methyltransferase VCD_000325 IPR004680 Citrate transporter-like domain VCD_000326 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VCD_000327 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VCD_000328 IPR002109 Glutaredoxin VCD_000328 IPR014025 Glutaredoxin subgroup VCD_000328 IPR011767 Glutaredoxin active site VCD_000328 IPR011900 Glutaredoxin, GrxC VCD_000328 IPR036249 Thioredoxin-like superfamily VCD_000329 IPR000620 EamA domain VCD_000330 IPR033900 Porin domain, Gram-negative type VCD_000330 IPR023614 Porin domain superfamily VCD_000332 IPR003718 OsmC/Ohr family VCD_000332 IPR015946 K homology domain-like, alpha/beta VCD_000332 IPR036102 OsmC/Ohr superfamily VCD_000332 IPR019953 Organic hydroperoxide resistance protein famiy VCD_000333 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000333 IPR000835 MarR-type HTH domain VCD_000333 IPR036390 Winged helix DNA-binding domain superfamily VCD_000334 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily VCD_000334 IPR011234 Fumarylacetoacetase-like, C-terminal VCD_000337 IPR011051 RmlC-like cupin domain superfamily VCD_000337 IPR018062 HTH domain AraC-type, conserved site VCD_000337 IPR018060 DNA binding HTH domain, AraC-type VCD_000337 IPR009057 Homeobox-like domain superfamily VCD_000338 IPR001123 Amino acid exporter protein, LeuE-type VCD_000338 IPR004778 Homoserine/Threonine efflux protein VCD_000340 IPR013785 Aldolase-type TIM barrel VCD_000340 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VCD_000342 IPR017871 ABC transporter, conserved site VCD_000342 IPR003439 ABC transporter-like VCD_000342 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_000342 IPR011527 ABC transporter type 1, transmembrane domain VCD_000342 IPR003593 AAA+ ATPase domain VCD_000342 IPR039421 Type I protein exporter VCD_000342 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000345 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VCD_000345 IPR013785 Aldolase-type TIM barrel VCD_000347 IPR005119 LysR, substrate-binding VCD_000347 IPR036390 Winged helix DNA-binding domain superfamily VCD_000347 IPR000847 Transcription regulator HTH, LysR VCD_000347 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000348 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_000348 IPR011545 DEAD/DEAH box helicase domain VCD_000348 IPR001650 Helicase, C-terminal VCD_000348 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_000348 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000348 IPR028622 ATP-dependent RNA helicase RhlE VCD_000348 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_000349 IPR002528 Multi antimicrobial extrusion protein VCD_000350 IPR013655 PAS fold-3 VCD_000350 IPR035965 PAS domain superfamily VCD_000350 IPR001610 PAC motif VCD_000350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000350 IPR003660 HAMP domain VCD_000350 IPR004090 Chemotaxis methyl-accepting receptor VCD_000350 IPR000014 PAS domain VCD_000351 IPR008279 PEP-utilising enzyme, mobile domain VCD_000351 IPR006319 Phosphoenolpyruvate synthase VCD_000351 IPR018274 PEP-utilising enzyme, active site VCD_000351 IPR000121 PEP-utilising enzyme, C-terminal VCD_000351 IPR023151 PEP-utilising enzyme, conserved site VCD_000351 IPR036637 Phosphohistidine domain superfamily VCD_000351 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding VCD_000351 IPR040442 Pyruvate kinase-like domain superfamily VCD_000351 IPR013815 ATP-grasp fold, subdomain 1 VCD_000351 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_000352 IPR005177 Bifunctional kinase-pyrophosphorylase VCD_000352 IPR026530 Phosphoenolpyruvate synthase regulatory protein VCD_000354 IPR020920 L-lactate dehydrogenase, bacterial VCD_000354 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site VCD_000354 IPR037396 FMN hydroxy acid dehydrogenase domain VCD_000354 IPR000262 FMN-dependent dehydrogenase VCD_000354 IPR013785 Aldolase-type TIM barrel VCD_000354 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent VCD_000355 IPR003804 L-lactate permease VCD_000356 IPR000847 Transcription regulator HTH, LysR VCD_000356 IPR005119 LysR, substrate-binding VCD_000356 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000356 IPR036390 Winged helix DNA-binding domain superfamily VCD_000360 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_000360 IPR018313 Solute-binding protein family 3, conserved site VCD_000360 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VCD_000361 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000361 IPR003593 AAA+ ATPase domain VCD_000361 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_000361 IPR017871 ABC transporter, conserved site VCD_000361 IPR003439 ABC transporter-like VCD_000363 IPR041699 Lon protease, AAA domain VCD_000363 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_000363 IPR008269 Peptidase S16, Lon proteolytic domain VCD_000363 IPR027065 Lon protease VCD_000363 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_000364 IPR003660 HAMP domain VCD_000364 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000364 IPR033480 Single Cache domain 2 VCD_000364 IPR004090 Chemotaxis methyl-accepting receptor VCD_000365 IPR011701 Major facilitator superfamily VCD_000365 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG VCD_000365 IPR005829 Sugar transporter, conserved site VCD_000365 IPR036259 MFS transporter superfamily VCD_000365 IPR020846 Major facilitator superfamily domain VCD_000367 IPR009664 Pyrimidine/purine nucleoside phosphorylase VCD_000367 IPR014710 RmlC-like jelly roll fold VCD_000367 IPR011051 RmlC-like cupin domain superfamily VCD_000368 IPR014710 RmlC-like jelly roll fold VCD_000368 IPR003829 Pirin, N-terminal domain VCD_000368 IPR008778 Pirin, C-terminal domain VCD_000368 IPR012093 Pirin VCD_000368 IPR011051 RmlC-like cupin domain superfamily VCD_000370 IPR029787 Nucleotide cyclase VCD_000370 IPR001633 EAL domain VCD_000370 IPR003660 HAMP domain VCD_000370 IPR035919 EAL domain superfamily VCD_000370 IPR000160 GGDEF domain VCD_000371 IPR036390 Winged helix DNA-binding domain superfamily VCD_000371 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000371 IPR005119 LysR, substrate-binding VCD_000371 IPR000847 Transcription regulator HTH, LysR VCD_000375 IPR000160 GGDEF domain VCD_000375 IPR001633 EAL domain VCD_000375 IPR029787 Nucleotide cyclase VCD_000375 IPR035919 EAL domain superfamily VCD_000375 IPR005330 MHYT domain VCD_000378 IPR000160 GGDEF domain VCD_000378 IPR029787 Nucleotide cyclase VCD_000379 IPR000835 MarR-type HTH domain VCD_000379 IPR036390 Winged helix DNA-binding domain superfamily VCD_000379 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000380 IPR024181 Chemotaxis response regulator CheV VCD_000380 IPR036061 CheW-like domain superfamily VCD_000380 IPR002545 CheW-like domain VCD_000380 IPR011006 CheY-like superfamily VCD_000380 IPR001789 Signal transduction response regulator, receiver domain VCD_000381 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VCD_000381 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VCD_000383 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000383 IPR000792 Transcription regulator LuxR, C-terminal VCD_000383 IPR016032 Signal transduction response regulator, C-terminal effector VCD_000384 IPR002765 Uncharacterised protein family UPF0145 VCD_000384 IPR035439 UPF0145 domain superfamily VCD_000387 IPR016181 Acyl-CoA N-acyltransferase VCD_000387 IPR000182 GNAT domain VCD_000388 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000388 IPR008995 Molybdate/tungstate binding, C-terminal VCD_000388 IPR015855 ABC transporter, maltose/maltodextrin import, MalK VCD_000388 IPR003439 ABC transporter-like VCD_000388 IPR003593 AAA+ ATPase domain VCD_000388 IPR017871 ABC transporter, conserved site VCD_000388 IPR013611 Transport-associated OB, type 2 VCD_000389 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein VCD_000389 IPR006061 Solute-binding family 1, conserved site VCD_000389 IPR006059 Bacterial extracellular solute-binding protein VCD_000390 IPR035906 MetI-like superfamily VCD_000390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000390 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like VCD_000390 IPR029345 Maltose transport system permease protein MalF, P2 domain VCD_000390 IPR035277 MalF, N-terminal VCD_000391 IPR035906 MetI-like superfamily VCD_000391 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000394 IPR014036 DeoR C-terminal sensor domain VCD_000394 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000394 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VCD_000394 IPR037171 NagB/RpiA transferase-like VCD_000394 IPR036390 Winged helix DNA-binding domain superfamily VCD_000394 IPR001034 DeoR-type HTH domain VCD_000395 IPR000700 PAS-associated, C-terminal VCD_000395 IPR035965 PAS domain superfamily VCD_000395 IPR013656 PAS fold-4 VCD_000395 IPR000014 PAS domain VCD_000395 IPR029787 Nucleotide cyclase VCD_000395 IPR000160 GGDEF domain VCD_000397 IPR009057 Homeobox-like domain superfamily VCD_000397 IPR001789 Signal transduction response regulator, receiver domain VCD_000397 IPR011006 CheY-like superfamily VCD_000397 IPR018060 DNA binding HTH domain, AraC-type VCD_000400 IPR012340 Nucleic acid-binding, OB-fold VCD_000400 IPR012156 Cold shock, CspA VCD_000400 IPR011129 Cold shock domain VCD_000400 IPR002059 Cold-shock protein, DNA-binding VCD_000401 IPR037522 HD-GYP domain VCD_000401 IPR003607 HD/PDEase domain VCD_000402 IPR008526 Inner membrane protein YedI VCD_000403 IPR030390 RNA methyltransferase TrmA, active site VCD_000403 IPR010280 (Uracil-5)-methyltransferase family VCD_000403 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_000403 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC VCD_000405 IPR008523 Protein of unknown function DUF805 VCD_000407 IPR004721 Dihydroorotase homodimeric type VCD_000407 IPR006680 Amidohydrolase-related VCD_000407 IPR032466 Metal-dependent hydrolase VCD_000407 IPR002195 Dihydroorotase, conserved site VCD_000408 IPR005303 MOSC, N-terminal beta barrel VCD_000408 IPR005302 Molybdenum cofactor sulfurase, C-terminal VCD_000408 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VCD_000408 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VCD_000408 IPR036010 2Fe-2S ferredoxin-like superfamily VCD_000408 IPR011037 Pyruvate kinase-like, insert domain superfamily VCD_000408 IPR005303 MOSC, N-terminal beta barrel VCD_000408 IPR005302 Molybdenum cofactor sulfurase, C-terminal VCD_000408 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VCD_000408 IPR012675 Beta-grasp domain superfamily VCD_000408 IPR012675 Beta-grasp domain superfamily VCD_000408 IPR036010 2Fe-2S ferredoxin-like superfamily VCD_000408 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VCD_000408 IPR011037 Pyruvate kinase-like, insert domain superfamily VCD_000409 IPR003660 HAMP domain VCD_000409 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000409 IPR029151 Periplasmic sensor-like domain superfamily VCD_000409 IPR004090 Chemotaxis methyl-accepting receptor VCD_000409 IPR033479 Double Cache domain 1 VCD_000409 IPR000727 Target SNARE coiled-coil homology domain VCD_000416 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000416 IPR003593 AAA+ ATPase domain VCD_000416 IPR003439 ABC transporter-like VCD_000416 IPR015863 ABC transporter, hemin import, HmuV VCD_000417 IPR000522 ABC transporter, permease protein, BtuC-like VCD_000417 IPR037294 ABC transporter, BtuC-like VCD_000418 IPR002491 ABC transporter periplasmic binding domain VCD_000419 IPR003400 Biopolymer transport protein ExbD/TolR VCD_000420 IPR002898 MotA/TolQ/ExbB proton channel VCD_000421 IPR003538 Gram-negative bacterial TonB protein VCD_000421 IPR006260 TonB/TolA, C-terminal VCD_000421 IPR037682 TonB, C-terminal VCD_000422 IPR006638 Elp3/MiaB/NifB VCD_000422 IPR034505 Anaerobic coproporphyrinogen-III oxidase VCD_000422 IPR026332 Anaerobilin synthase HutW VCD_000422 IPR007197 Radical SAM VCD_000422 IPR023404 Radical SAM, alpha/beta horseshoe VCD_000423 IPR010413 Intracellular heme transport protein HutX-like VCD_000424 IPR012349 FMN-binding split barrel VCD_000424 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative VCD_000424 IPR014419 Heme utilization protein HutZ VCD_000425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000425 IPR003660 HAMP domain VCD_000425 IPR004090 Chemotaxis methyl-accepting receptor VCD_000426 IPR042070 PucR C-terminal helix-turn-helix domain superfamily VCD_000426 IPR041522 CdaR, GGDEF-like domain VCD_000426 IPR008599 Putative sugar diacid recognition VCD_000426 IPR025736 PucR C-terminal helix-turn-helix domain VCD_000427 IPR003474 Gluconate transporter VCD_000428 IPR018197 Glycerate kinase, restriction-enzyme-like fold VCD_000428 IPR018193 Glycerate kinase, flavodoxin-like fold VCD_000428 IPR036129 Glycerate kinase superfamily VCD_000428 IPR004381 Glycerate kinase VCD_000433 IPR006183 6-phosphogluconate dehydrogenase VCD_000433 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating VCD_000433 IPR036291 NAD(P)-binding domain superfamily VCD_000433 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VCD_000433 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_000433 IPR006184 6-phosphogluconate-binding site VCD_000433 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VCD_000433 IPR006114 6-phosphogluconate dehydrogenase, C-terminal VCD_000434 IPR005900 6-phosphogluconolactonase, DevB-type VCD_000434 IPR039104 6-Phosphogluconolactonase VCD_000434 IPR037171 NagB/RpiA transferase-like VCD_000434 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VCD_000435 IPR036291 NAD(P)-binding domain superfamily VCD_000435 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding VCD_000435 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal VCD_000435 IPR019796 Glucose-6-phosphate dehydrogenase, active site VCD_000435 IPR001282 Glucose-6-phosphate dehydrogenase VCD_000436 IPR037522 HD-GYP domain VCD_000436 IPR003607 HD/PDEase domain VCD_000436 IPR006674 HD domain VCD_000436 IPR006675 HDIG domain VCD_000437 IPR023710 Probable phosphatase YcdX VCD_000437 IPR003141 Polymerase/histidinol phosphatase, N-terminal VCD_000437 IPR016195 Polymerase/histidinol phosphatase-like VCD_000441 IPR037478 YwkD-like domain VCD_000441 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_000441 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_000441 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_000442 IPR036390 Winged helix DNA-binding domain superfamily VCD_000442 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000442 IPR000847 Transcription regulator HTH, LysR VCD_000442 IPR005119 LysR, substrate-binding VCD_000447 IPR004839 Aminotransferase, class I/classII VCD_000447 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000447 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase VCD_000447 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VCD_000447 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000447 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000448 IPR013149 Alcohol dehydrogenase, C-terminal VCD_000448 IPR013154 Alcohol dehydrogenase, N-terminal VCD_000448 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VCD_000448 IPR011032 GroES-like superfamily VCD_000448 IPR004627 L-threonine 3-dehydrogenase VCD_000448 IPR036291 NAD(P)-binding domain superfamily VCD_000448 IPR020843 Polyketide synthase, enoylreductase domain VCD_000457 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000457 IPR036390 Winged helix DNA-binding domain superfamily VCD_000457 IPR005119 LysR, substrate-binding VCD_000457 IPR000847 Transcription regulator HTH, LysR VCD_000457 IPR011781 D-serine deaminase transcriptional activator VCD_000458 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCD_000458 IPR001926 Pyridoxal-phosphate dependent enzyme VCD_000458 IPR011780 D-serine ammonia-lyase VCD_000458 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VCD_000460 IPR003317 Cytochrome ubiquinol oxidase subunit 2 VCD_000461 IPR002585 Cytochrome ubiquinol oxidase subunit 1 VCD_000462 IPR036390 Winged helix DNA-binding domain superfamily VCD_000462 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000462 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000462 IPR000524 Transcription regulator HTH, GntR VCD_000462 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000462 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000462 IPR004839 Aminotransferase, class I/classII VCD_000463 IPR012338 Beta-lactamase/transpeptidase-like VCD_000463 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VCD_000463 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VCD_000465 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VCD_000465 IPR005618 Outer membrane protein, OmpW VCD_000466 IPR023612 Peptidase M4 VCD_000466 IPR013856 Peptidase M4 domain VCD_000466 IPR001570 Peptidase M4, C-terminal VCD_000466 IPR027268 Peptidase M4/M1, CTD superfamily VCD_000466 IPR007280 Peptidase, C-terminal, archaeal/bacterial VCD_000466 IPR025711 PepSY domain VCD_000466 IPR011096 FTP domain VCD_000467 IPR000014 PAS domain VCD_000467 IPR013655 PAS fold-3 VCD_000467 IPR035965 PAS domain superfamily VCD_000467 IPR000700 PAS-associated, C-terminal VCD_000467 IPR001610 PAC motif VCD_000467 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000467 IPR004090 Chemotaxis methyl-accepting receptor VCD_000468 IPR025920 Bacterial virulence factor lipase, N-terminal domain VCD_000468 IPR029058 Alpha/Beta hydrolase fold VCD_000468 IPR020009 Extracellular lipase, Pla-1/cef family VCD_000469 IPR042117 OMPP1/FadL/TodX superfamily VCD_000469 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCD_000470 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VCD_000470 IPR017853 Glycoside hydrolase superfamily VCD_000470 IPR014635 Alpha-amylase, MalS type VCD_000471 IPR023210 NADP-dependent oxidoreductase domain VCD_000471 IPR036812 NADP-dependent oxidoreductase domain superfamily VCD_000471 IPR020471 Aldo/keto reductase VCD_000474 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000474 IPR017871 ABC transporter, conserved site VCD_000474 IPR003439 ABC transporter-like VCD_000474 IPR003593 AAA+ ATPase domain VCD_000475 IPR017911 ABC transporter, macrolide export, ATP-binding domain VCD_000475 IPR025857 MacB-like periplasmic core domain VCD_000475 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000475 IPR017871 ABC transporter, conserved site VCD_000475 IPR003838 ABC transporter permease protein domain VCD_000475 IPR003593 AAA+ ATPase domain VCD_000475 IPR003439 ABC transporter-like VCD_000478 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VCD_000478 IPR010559 Signal transduction histidine kinase, internal region VCD_000478 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000478 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000478 IPR003018 GAF domain VCD_000479 IPR011006 CheY-like superfamily VCD_000479 IPR007492 LytTR DNA-binding domain VCD_000479 IPR001789 Signal transduction response regulator, receiver domain VCD_000481 IPR000160 GGDEF domain VCD_000481 IPR029787 Nucleotide cyclase VCD_000482 IPR002293 Amino acid/polyamine transporter I VCD_000485 IPR036291 NAD(P)-binding domain superfamily VCD_000485 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VCD_000485 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VCD_000485 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VCD_000485 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VCD_000485 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VCD_000487 IPR016192 APOBEC/CMP deaminase, zinc-binding VCD_000487 IPR016193 Cytidine deaminase-like VCD_000487 IPR002125 Cytidine and deoxycytidylate deaminase domain VCD_000487 IPR035105 Deoxycytidylate deaminase domain VCD_000487 IPR015517 Deoxycytidylate deaminase-related VCD_000487 IPR016473 Deoxycytidylate deaminase VCD_000488 IPR003718 OsmC/Ohr family VCD_000488 IPR015946 K homology domain-like, alpha/beta VCD_000488 IPR036102 OsmC/Ohr superfamily VCD_000489 IPR005170 Transporter-associated domain VCD_000489 IPR036318 FAD-binding, type PCMH-like superfamily VCD_000489 IPR000644 CBS domain VCD_000489 IPR002550 CNNM, transmembrane domain VCD_000489 IPR016169 FAD-binding, type PCMH, subdomain 2 VCD_000490 IPR001451 Hexapeptide repeat VCD_000490 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal VCD_000490 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH VCD_000490 IPR018357 Hexapeptide transferase, conserved site VCD_000490 IPR011004 Trimeric LpxA-like superfamily VCD_000491 IPR000620 EamA domain VCD_000493 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000493 IPR000847 Transcription regulator HTH, LysR VCD_000493 IPR036390 Winged helix DNA-binding domain superfamily VCD_000493 IPR005119 LysR, substrate-binding VCD_000494 IPR010233 Ubiquinone biosynthesis O-methyltransferase VCD_000494 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_000496 IPR005914 Acetoacetyl-CoA synthase VCD_000496 IPR000873 AMP-dependent synthetase/ligase VCD_000496 IPR042099 AMP-dependent synthetase-like superfamily VCD_000496 IPR025110 AMP-binding enzyme, C-terminal domain VCD_000496 IPR020845 AMP-binding, conserved site VCD_000497 IPR019774 Aromatic amino acid hydroxylase, C-terminal VCD_000497 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VCD_000497 IPR036951 Aromatic amino acid hydroxylase superfamily VCD_000497 IPR005960 Phenylalanine-4-hydroxylase, monomeric form VCD_000497 IPR001273 Aromatic amino acid hydroxylase VCD_000497 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site VCD_000498 IPR001533 Pterin 4 alpha carbinolamine dehydratase VCD_000498 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily VCD_000499 IPR000182 GNAT domain VCD_000499 IPR012772 L-2,4-diaminobutyric acid acetyltransferase VCD_000499 IPR016181 Acyl-CoA N-acyltransferase VCD_000500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000500 IPR005814 Aminotransferase class-III VCD_000500 IPR004637 2,4-diaminobutyrate 4-transaminase VCD_000500 IPR012773 Ectoine biosynthetic protein VCD_000500 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000500 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000501 IPR010462 Ectoine synthase VCD_000501 IPR011051 RmlC-like cupin domain superfamily VCD_000501 IPR014710 RmlC-like jelly roll fold VCD_000502 IPR001048 Aspartate/glutamate/uridylate kinase VCD_000502 IPR027795 CASTOR, ACT domain VCD_000502 IPR036393 Acetylglutamate kinase-like superfamily VCD_000504 IPR001844 Chaperonin Cpn60 VCD_000504 IPR002423 Chaperonin Cpn60/TCP-1 family VCD_000504 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VCD_000504 IPR027413 GroEL-like equatorial domain superfamily VCD_000504 IPR027409 GroEL-like apical domain superfamily VCD_000504 IPR018370 Chaperonin Cpn60, conserved site VCD_000505 IPR037124 GroES chaperonin superfamily VCD_000505 IPR011032 GroES-like superfamily VCD_000505 IPR020818 GroES chaperonin family VCD_000505 IPR018369 Chaperonin GroES, conserved site VCD_000506 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VCD_000506 IPR006667 SLC41 divalent cation transporters, integral membrane domain VCD_000506 IPR006669 Magnesium transporter MgtE VCD_000506 IPR038048 Magnesium transporter MgtE, transmembrane domain VCD_000506 IPR038076 MgtE, N-terminal domain superfamily VCD_000506 IPR006668 Magnesium transporter, MgtE intracellular domain VCD_000506 IPR000644 CBS domain VCD_000509 IPR000183 Ornithine/DAP/Arg decarboxylase VCD_000509 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VCD_000509 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VCD_000509 IPR041128 Arginine decarboxylase, C-terminal helical VCD_000509 IPR040634 Arginine decarboxylase, helical bundle domain VCD_000509 IPR029066 PLP-binding barrel VCD_000509 IPR002985 Arginine decarboxylase VCD_000510 IPR023694 Agmatinase VCD_000510 IPR023696 Ureohydrolase domain superfamily VCD_000510 IPR020855 Ureohydrolase, manganese-binding site VCD_000510 IPR006035 Ureohydrolase VCD_000510 IPR005925 Agmatinase-related VCD_000511 IPR007484 Peptidase M28 VCD_000511 IPR007280 Peptidase, C-terminal, archaeal/bacterial VCD_000511 IPR012189 Peptidase M28E, aminopeptidase AP1 VCD_000512 IPR023612 Peptidase M4 VCD_000512 IPR013856 Peptidase M4 domain VCD_000512 IPR001570 Peptidase M4, C-terminal VCD_000512 IPR027268 Peptidase M4/M1, CTD superfamily VCD_000512 IPR007280 Peptidase, C-terminal, archaeal/bacterial VCD_000512 IPR025711 PepSY domain VCD_000512 IPR011096 FTP domain VCD_000513 IPR014756 Immunoglobulin E-set VCD_000513 IPR041029 N-acetylglucosamine binding protein A domain 2 VCD_000513 IPR020879 N-acetylglucosamine-binding protein A VCD_000513 IPR004302 Cellulose/chitin-binding protein, N-terminal VCD_000514 IPR007357 Deoxyribodipyrimidine photolyase-related protein VCD_000514 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_000514 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VCD_000515 IPR039375 Nodulation protein N-like VCD_000515 IPR029069 HotDog domain superfamily VCD_000515 IPR002539 MaoC-like dehydratase domain VCD_000516 IPR024370 PBP domain VCD_000516 IPR011862 Phosphate binding protein VCD_000518 IPR011129 Cold shock domain VCD_000518 IPR012340 Nucleic acid-binding, OB-fold VCD_000518 IPR013223 Ribonuclease B, N-terminal OB domain VCD_000518 IPR003029 S1 domain VCD_000518 IPR004476 Ribonuclease II/ribonuclease R VCD_000518 IPR022966 Ribonuclease II/R, conserved site VCD_000518 IPR001900 Ribonuclease II/R VCD_000518 IPR011804 Ribonuclease II VCD_000519 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_000519 IPR034415 CsdA, RNA recognition motif VCD_000519 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VCD_000519 IPR011545 DEAD/DEAH box helicase domain VCD_000519 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000519 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_000519 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_000519 IPR028618 ATP-dependent RNA helicase DeaD VCD_000519 IPR001650 Helicase, C-terminal VCD_000519 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VCD_000521 IPR017850 Alkaline-phosphatase-like, core domain superfamily VCD_000521 IPR000917 Sulfatase, N-terminal VCD_000521 IPR012160 Lipoteichoic acid synthase-like VCD_000522 IPR029056 Ribokinase-like VCD_000522 IPR011611 Carbohydrate kinase PfkB VCD_000522 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VCD_000525 IPR036412 HAD-like superfamily VCD_000525 IPR006439 HAD hydrolase, subfamily IA VCD_000525 IPR041492 Haloacid dehalogenase-like hydrolase VCD_000525 IPR023214 HAD superfamily VCD_000525 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VCD_000525 IPR037512 Phosphoglycolate phosphatase, prokaryotic VCD_000527 IPR006118 Recombinase, conserved site VCD_000527 IPR009057 Homeobox-like domain superfamily VCD_000527 IPR006119 Resolvase, N-terminal catalytic domain VCD_000527 IPR006120 Resolvase, HTH domain VCD_000527 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily VCD_000530 IPR009057 Homeobox-like domain superfamily VCD_000530 IPR002514 Transposase IS3/IS911family VCD_000531 IPR038965 Transposase InsF-like VCD_000531 IPR001584 Integrase, catalytic core VCD_000531 IPR036397 Ribonuclease H superfamily VCD_000531 IPR012337 Ribonuclease H-like superfamily VCD_000534 IPR036869 Chaperone J-domain superfamily VCD_000534 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VCD_000534 IPR008971 HSP40/DnaJ peptide-binding VCD_000534 IPR018253 DnaJ domain, conserved site VCD_000534 IPR001623 DnaJ domain VCD_000534 IPR002939 Chaperone DnaJ, C-terminal VCD_000534 IPR012724 Chaperone DnaJ VCD_000534 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VCD_000537 IPR029787 Nucleotide cyclase VCD_000537 IPR008984 SMAD/FHA domain superfamily VCD_000537 IPR000160 GGDEF domain VCD_000537 IPR000253 Forkhead-associated (FHA) domain VCD_000537 IPR035919 EAL domain superfamily VCD_000537 IPR001633 EAL domain VCD_000538 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VCD_000538 IPR010758 Trans-2-enoyl-CoA reductase VCD_000538 IPR036291 NAD(P)-binding domain superfamily VCD_000538 IPR024906 Enoyl reductase FAD binding domain VCD_000539 IPR036514 SGNH hydrolase superfamily VCD_000539 IPR008265 Lipase, GDSL, active site VCD_000539 IPR013830 SGNH hydrolase-type esterase domain VCD_000540 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000540 IPR017871 ABC transporter, conserved site VCD_000540 IPR003593 AAA+ ATPase domain VCD_000540 IPR003439 ABC transporter-like VCD_000541 IPR038766 Membrane component of ABC transporter, predicted VCD_000542 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VCD_000542 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VCD_000542 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily VCD_000542 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VCD_000542 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VCD_000542 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_000542 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type VCD_000542 IPR036291 NAD(P)-binding domain superfamily VCD_000544 IPR029000 Cyclophilin-like domain superfamily VCD_000544 IPR003778 Carboxyltransferase domain, subdomain A and B VCD_000546 IPR005501 LamB/YcsF/PxpA-like VCD_000546 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VCD_000547 IPR005886 UDP-glucose 4-epimerase VCD_000547 IPR036291 NAD(P)-binding domain superfamily VCD_000547 IPR016040 NAD(P)-binding domain VCD_000548 IPR004090 Chemotaxis methyl-accepting receptor VCD_000548 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_000548 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000548 IPR000727 Target SNARE coiled-coil homology domain VCD_000548 IPR003660 HAMP domain VCD_000549 IPR018227 Amino acid/polyamine transporter 2 VCD_000549 IPR013059 Tryptophan/tyrosine transporter VCD_000549 IPR013061 Tryptophan/tryrosine permease, conserved site VCD_000551 IPR007431 Acyl carrier protein phosphodiesterase VCD_000551 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria VCD_000552 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_000552 IPR011545 DEAD/DEAH box helicase domain VCD_000552 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000552 IPR001650 Helicase, C-terminal VCD_000552 IPR028622 ATP-dependent RNA helicase RhlE VCD_000552 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_000552 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_000553 IPR001647 DNA-binding HTH domain, TetR-type VCD_000553 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VCD_000553 IPR009057 Homeobox-like domain superfamily VCD_000553 IPR013572 Transcription regulator MAATS, C-terminal VCD_000553 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VCD_000554 IPR024167 Cytochrome c4-like VCD_000554 IPR009056 Cytochrome c-like domain VCD_000554 IPR036909 Cytochrome c-like domain superfamily VCD_000555 IPR023603 Threonine aldolase VCD_000555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000555 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000555 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VCD_000556 IPR000086 NUDIX hydrolase domain VCD_000556 IPR020084 NUDIX hydrolase, conserved site VCD_000556 IPR020476 NUDIX hydrolase VCD_000556 IPR015797 NUDIX hydrolase-like domain superfamily VCD_000557 IPR011704 ATPase, dynein-related, AAA domain VCD_000557 IPR023671 ATPase RavA VCD_000557 IPR003593 AAA+ ATPase domain VCD_000557 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000557 IPR041538 ATPase RavA-like, AAA lid domain VCD_000557 IPR022547 ATPase, RavA, C-terminal VCD_000558 IPR036465 von Willebrand factor A-like domain superfamily VCD_000558 IPR002035 von Willebrand factor, type A VCD_000558 IPR008912 Uncharacterised protein family CoxE-like VCD_000558 IPR023481 Uncharacterised protein family ViaA VCD_000560 IPR003439 ABC transporter-like VCD_000560 IPR003593 AAA+ ATPase domain VCD_000560 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VCD_000560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000560 IPR017871 ABC transporter, conserved site VCD_000561 IPR001320 Ionotropic glutamate receptor VCD_000561 IPR018313 Solute-binding protein family 3, conserved site VCD_000561 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_000561 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VCD_000562 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000562 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_000562 IPR035906 MetI-like superfamily VCD_000563 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000563 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_000563 IPR035906 MetI-like superfamily VCD_000564 IPR036390 Winged helix DNA-binding domain superfamily VCD_000564 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000564 IPR005119 LysR, substrate-binding VCD_000564 IPR000847 Transcription regulator HTH, LysR VCD_000565 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_000565 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_000567 IPR011701 Major facilitator superfamily VCD_000567 IPR020846 Major facilitator superfamily domain VCD_000567 IPR036259 MFS transporter superfamily VCD_000567 IPR023745 MSF-type transporter, YcaD VCD_000568 IPR017937 Thioredoxin, conserved site VCD_000568 IPR036249 Thioredoxin-like superfamily VCD_000568 IPR013766 Thioredoxin domain VCD_000568 IPR005746 Thioredoxin VCD_000569 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VCD_000569 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCD_000569 IPR016039 Thiolase-like VCD_000569 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal VCD_000570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_000570 IPR009051 Alpha-helical ferredoxin VCD_000570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_000570 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit VCD_000570 IPR004017 Cysteine-rich domain VCD_000571 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VCD_000571 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_000571 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit VCD_000572 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit VCD_000572 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase VCD_000572 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_000572 IPR006076 FAD dependent oxidoreductase VCD_000572 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily VCD_000572 IPR007419 BFD-like [2Fe-2S]-binding domain VCD_000574 IPR000425 Major intrinsic protein VCD_000574 IPR022357 Major intrinsic protein, conserved site VCD_000574 IPR023271 Aquaporin-like VCD_000575 IPR000577 Carbohydrate kinase, FGGY VCD_000575 IPR018484 Carbohydrate kinase, FGGY, N-terminal VCD_000575 IPR005999 Glycerol kinase VCD_000575 IPR018485 Carbohydrate kinase, FGGY, C-terminal VCD_000575 IPR018483 Carbohydrate kinase, FGGY, conserved site VCD_000578 IPR007458 Protein of unknown function DUF496 VCD_000580 IPR007432 Protein of unknown function DUF480 VCD_000580 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000580 IPR036390 Winged helix DNA-binding domain superfamily VCD_000581 IPR035901 GIY-YIG endonuclease superfamily VCD_000581 IPR000305 GIY-YIG endonuclease VCD_000583 IPR028082 Periplasmic binding protein-like I VCD_000583 IPR025997 Periplasmic binding protein VCD_000584 IPR001789 Signal transduction response regulator, receiver domain VCD_000584 IPR011006 CheY-like superfamily VCD_000584 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000584 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000584 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000584 IPR015387 LuxQ, periplasmic VCD_000584 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000584 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000584 IPR029151 Periplasmic sensor-like domain superfamily VCD_000584 IPR005467 Histidine kinase domain VCD_000592 IPR017929 CobB/CobQ glutamine amidotransferase VCD_000592 IPR004459 Cobyric acid synthase CobQ VCD_000592 IPR029062 Class I glutamine amidotransferase-like VCD_000592 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VCD_000592 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 VCD_000592 IPR011698 CobB/CobQ-like glutamine amidotransferase VCD_000592 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000593 IPR005950 Molybdate ABC transporter, substrate-binding protein VCD_000594 IPR011867 Molybdate ABC transporter, permease protein VCD_000594 IPR035906 MetI-like superfamily VCD_000594 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000595 IPR008995 Molybdate/tungstate binding, C-terminal VCD_000595 IPR015852 ABC transporter, molybdenum import, ModC VCD_000595 IPR017871 ABC transporter, conserved site VCD_000595 IPR003439 ABC transporter-like VCD_000595 IPR003593 AAA+ ATPase domain VCD_000595 IPR004606 Molybdenum-pterin binding VCD_000595 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000595 IPR005116 Transport-associated OB, type 1 VCD_000595 IPR011868 Molybdate ABC transporter, ATP-binding protein VCD_000600 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000600 IPR005467 Histidine kinase domain VCD_000600 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000600 IPR013656 PAS fold-4 VCD_000600 IPR001789 Signal transduction response regulator, receiver domain VCD_000600 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000600 IPR011006 CheY-like superfamily VCD_000600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000600 IPR035965 PAS domain superfamily VCD_000600 IPR000014 PAS domain VCD_000601 IPR010019 Integral membrane protein, YccS VCD_000601 IPR010020 Integral membrane protein, YccS/YhfK VCD_000601 IPR032692 Integral membrane protein YccS, N-terminal VCD_000602 IPR014016 UvrD-like helicase, ATP-binding domain VCD_000602 IPR014017 UvrD-like DNA helicase, C-terminal VCD_000602 IPR000212 DNA helicase, UvrD/REP type VCD_000602 IPR022161 DNA helicase IV, N-terminal domain VCD_000602 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000602 IPR034739 UvrD/AddA helicase, N-terminal VCD_000605 IPR000829 DAGK family VCD_000605 IPR036945 Diacylglycerol kinase (DAGK) superfamily VCD_000605 IPR033718 Diacylglycerol kinase, prokaryotic VCD_000607 IPR036380 Isochorismatase-like superfamily VCD_000607 IPR000868 Isochorismatase-like VCD_000608 IPR011607 Methylglyoxal synthase-like domain VCD_000608 IPR036914 Methylglyoxal synthase-like domain superfamily VCD_000608 IPR004363 Methylglyoxal synthase VCD_000608 IPR018148 Methylglyoxal synthase, active site VCD_000609 IPR014301 TMAO reductase system, periplasmic protein TorT VCD_000609 IPR028082 Periplasmic binding protein-like I VCD_000609 IPR001761 Periplasmic binding protein/LacI sugar binding domain VCD_000610 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000610 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000610 IPR036641 HPT domain superfamily VCD_000610 IPR037952 Sensor histidine kinase TorS, sensor domain VCD_000610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000610 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_000610 IPR001789 Signal transduction response regulator, receiver domain VCD_000610 IPR038188 TorS, sensor domain superfamily VCD_000610 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000610 IPR005467 Histidine kinase domain VCD_000610 IPR003660 HAMP domain VCD_000610 IPR011006 CheY-like superfamily VCD_000611 IPR036918 Pyruvate kinase, C-terminal domain superfamily VCD_000611 IPR015806 Pyruvate kinase, insert domain superfamily VCD_000611 IPR018209 Pyruvate kinase, active site VCD_000611 IPR011037 Pyruvate kinase-like, insert domain superfamily VCD_000611 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_000611 IPR001697 Pyruvate kinase VCD_000611 IPR015793 Pyruvate kinase, barrel VCD_000611 IPR015795 Pyruvate kinase, C-terminal VCD_000611 IPR040442 Pyruvate kinase-like domain superfamily VCD_000612 IPR021159 Glycerate/sugar phosphate transporter, conserved site VCD_000612 IPR036259 MFS transporter superfamily VCD_000612 IPR020846 Major facilitator superfamily domain VCD_000612 IPR011701 Major facilitator superfamily VCD_000612 IPR000849 Sugar phosphate transporter VCD_000614 IPR005467 Histidine kinase domain VCD_000614 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000614 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000614 IPR033479 Double Cache domain 1 VCD_000614 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VCD_000614 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000614 IPR029151 Periplasmic sensor-like domain superfamily VCD_000614 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000614 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000615 IPR002197 DNA binding HTH domain, Fis-type VCD_000615 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_000615 IPR025944 Sigma-54 interaction domain, conserved site VCD_000615 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000615 IPR009057 Homeobox-like domain superfamily VCD_000615 IPR001789 Signal transduction response regulator, receiver domain VCD_000615 IPR011006 CheY-like superfamily VCD_000617 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VCD_000617 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VCD_000618 IPR009470 Chitinase, C-terminal VCD_000618 IPR011583 Chitinase II VCD_000618 IPR036573 Carbohydrate-binding module superfamily 5/12 VCD_000618 IPR029070 Chitinase insertion domain superfamily VCD_000618 IPR001223 Glycoside hydrolase family 18, catalytic domain VCD_000618 IPR013783 Immunoglobulin-like fold VCD_000618 IPR017853 Glycoside hydrolase superfamily VCD_000618 IPR003610 Carbohydrate-binding module family 5/12 VCD_000619 IPR005836 ADP-glucose pyrophosphorylase, conserved site VCD_000619 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial VCD_000619 IPR029044 Nucleotide-diphospho-sugar transferases VCD_000619 IPR011831 Glucose-1-phosphate adenylyltransferase VCD_000619 IPR011004 Trimeric LpxA-like superfamily VCD_000619 IPR005835 Nucleotidyl transferase domain VCD_000620 IPR000160 GGDEF domain VCD_000620 IPR029787 Nucleotide cyclase VCD_000620 IPR033424 Membrane-associated sensor domain VCD_000629 IPR035105 Deoxycytidylate deaminase domain VCD_000629 IPR016192 APOBEC/CMP deaminase, zinc-binding VCD_000629 IPR002125 Cytidine and deoxycytidylate deaminase domain VCD_000629 IPR013404 Competence operon E, ComEB VCD_000629 IPR016193 Cytidine deaminase-like VCD_000629 IPR015517 Deoxycytidylate deaminase-related VCD_000632 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCD_000632 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VCD_000632 IPR001036 Acriflavin resistance protein VCD_000632 IPR027398 SecD export protein N-terminal TM domain VCD_000632 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VCD_000632 IPR005791 Protein translocase subunit SecD VCD_000633 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCD_000633 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VCD_000633 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VCD_000633 IPR005665 Protein-export membrane protein SecF, bacterial VCD_000634 IPR011283 Acetoacetyl-CoA reductase VCD_000634 IPR036291 NAD(P)-binding domain superfamily VCD_000634 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_000634 IPR002347 Short-chain dehydrogenase/reductase SDR VCD_000635 IPR020615 Thiolase, acyl-enzyme intermediate active site VCD_000635 IPR020616 Thiolase, N-terminal VCD_000635 IPR020613 Thiolase, conserved site VCD_000635 IPR020617 Thiolase, C-terminal VCD_000635 IPR020610 Thiolase, active site VCD_000635 IPR016039 Thiolase-like VCD_000635 IPR002155 Thiolase VCD_000637 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain VCD_000637 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I VCD_000637 IPR029058 Alpha/Beta hydrolase fold VCD_000638 IPR013611 Transport-associated OB, type 2 VCD_000638 IPR003439 ABC transporter-like VCD_000638 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000638 IPR017871 ABC transporter, conserved site VCD_000638 IPR003593 AAA+ ATPase domain VCD_000638 IPR015853 ABC transporter, ferric cation import, FbpC VCD_000638 IPR008995 Molybdate/tungstate binding, C-terminal VCD_000639 IPR035906 MetI-like superfamily VCD_000639 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000640 IPR026045 Ferric binding protein VCD_000641 IPR000849 Sugar phosphate transporter VCD_000641 IPR021159 Glycerate/sugar phosphate transporter, conserved site VCD_000641 IPR036259 MFS transporter superfamily VCD_000641 IPR020846 Major facilitator superfamily domain VCD_000641 IPR011701 Major facilitator superfamily VCD_000642 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VCD_000642 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000642 IPR005467 Histidine kinase domain VCD_000642 IPR007895 MASE1 VCD_000642 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000643 IPR000792 Transcription regulator LuxR, C-terminal VCD_000643 IPR011006 CheY-like superfamily VCD_000643 IPR016032 Signal transduction response regulator, C-terminal effector VCD_000643 IPR001789 Signal transduction response regulator, receiver domain VCD_000644 IPR037522 HD-GYP domain VCD_000644 IPR006674 HD domain VCD_000644 IPR003607 HD/PDEase domain VCD_000644 IPR006675 HDIG domain VCD_000646 IPR005126 NapC/NirT cytochrome c, N-terminal VCD_000646 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT VCD_000646 IPR038266 NapC/NirT cytochrome c superfamily VCD_000646 IPR024717 Denitrification system component NapC/NirT/NrfH VCD_000646 IPR011031 Multihaem cytochrome VCD_000646 IPR036280 Multiheme cytochrome superfamily VCD_000647 IPR036280 Multiheme cytochrome superfamily VCD_000647 IPR011031 Multihaem cytochrome VCD_000647 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VCD_000648 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain VCD_000648 IPR009010 Aspartate decarboxylase-like domain superfamily VCD_000648 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VCD_000648 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VCD_000648 IPR010051 Periplasmic nitrate reductase, large subunit VCD_000648 IPR006311 Twin-arginine translocation pathway, signal sequence VCD_000648 IPR006656 Molybdopterin oxidoreductase VCD_000648 IPR006657 Molybdopterin dinucleotide-binding domain VCD_000650 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_000650 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_000650 IPR004496 Ferredoxin-type protein NapF VCD_000651 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000651 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VCD_000651 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing VCD_000651 IPR042295 NarX-like, N-terminal domain superfamily VCD_000651 IPR029095 NarX-like, N-terminal VCD_000651 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000651 IPR005467 Histidine kinase domain VCD_000651 IPR003660 HAMP domain VCD_000652 IPR011006 CheY-like superfamily VCD_000652 IPR016032 Signal transduction response regulator, C-terminal effector VCD_000652 IPR001789 Signal transduction response regulator, receiver domain VCD_000652 IPR000792 Transcription regulator LuxR, C-terminal VCD_000653 IPR023588 Transcription regulator HTH, PurR VCD_000653 IPR028082 Periplasmic binding protein-like I VCD_000653 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_000653 IPR000843 LacI-type HTH domain VCD_000657 IPR038377 Sodium/glucose symporter superfamily VCD_000657 IPR001734 Sodium/solute symporter VCD_000657 IPR018212 Sodium/solute symporter, conserved site VCD_000658 IPR005131 Serine dehydratase beta chain VCD_000658 IPR005130 Serine dehydratase-like, alpha subunit VCD_000658 IPR029009 Allosteric substrate binding domain superfamily VCD_000658 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VCD_000659 IPR004669 C4-dicarboxylate anaerobic carrier VCD_000659 IPR018385 C4-dicarboxylate anaerobic carrier-like VCD_000660 IPR003660 HAMP domain VCD_000660 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000660 IPR000727 Target SNARE coiled-coil homology domain VCD_000660 IPR004090 Chemotaxis methyl-accepting receptor VCD_000660 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_000661 IPR010976 Beta-phosphoglucomutase hydrolase VCD_000661 IPR006439 HAD hydrolase, subfamily IA VCD_000661 IPR041492 Haloacid dehalogenase-like hydrolase VCD_000661 IPR023214 HAD superfamily VCD_000661 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VCD_000661 IPR036412 HAD-like superfamily VCD_000662 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VCD_000662 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VCD_000662 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VCD_000663 IPR006664 Outer membrane protein, bacterial VCD_000663 IPR006665 OmpA-like domain VCD_000663 IPR039567 Glycine zipper domain VCD_000663 IPR036737 OmpA-like domain superfamily VCD_000663 IPR006690 Outer membrane protein, OmpA-like, conserved site VCD_000664 IPR004090 Chemotaxis methyl-accepting receptor VCD_000664 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_000664 IPR003660 HAMP domain VCD_000665 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily VCD_000665 IPR031656 Alpha-glycerophosphate oxidase, C-terminal VCD_000665 IPR006076 FAD dependent oxidoreductase VCD_000665 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_000665 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase VCD_000666 IPR029056 Ribokinase-like VCD_000666 IPR002139 Ribokinase/fructokinase VCD_000666 IPR011611 Carbohydrate kinase PfkB VCD_000666 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VCD_000667 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VCD_000667 IPR001362 Glycoside hydrolase, family 32 VCD_000667 IPR006232 Sucrose-6-phosphate hydrolase VCD_000667 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VCD_000667 IPR013148 Glycosyl hydrolase family 32, N-terminal VCD_000667 IPR013189 Glycosyl hydrolase family 32, C-terminal VCD_000667 IPR018053 Glycoside hydrolase, family 32, active site VCD_000669 IPR013013 Phosphotransferase system, EIIC component, type 1 VCD_000669 IPR001996 Phosphotransferase system, IIB component, type 1 VCD_000669 IPR010973 Phosphotransferase system, sucrose-specific IIBC component VCD_000669 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VCD_000669 IPR036878 Glucose permease domain IIB VCD_000669 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VCD_000669 IPR003352 Phosphotransferase system, EIIC VCD_000678 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VCD_000678 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_000678 IPR023753 FAD/NAD(P)-binding domain VCD_000678 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCD_000680 IPR036390 Winged helix DNA-binding domain superfamily VCD_000680 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000680 IPR001845 HTH ArsR-type DNA-binding domain VCD_000680 IPR011991 ArsR-like helix-turn-helix domain VCD_000681 IPR007272 Sulphur transport domain VCD_000684 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 VCD_000684 IPR001036 Acriflavin resistance protein VCD_000684 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCD_000685 IPR000415 Nitroreductase-like VCD_000685 IPR033878 Nitroreductase NfsB-like VCD_000685 IPR029479 Nitroreductase VCD_000686 IPR007138 Antibiotic biosynthesis monooxygenase domain VCD_000686 IPR011008 Dimeric alpha-beta barrel VCD_000687 IPR005119 LysR, substrate-binding VCD_000687 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000687 IPR000847 Transcription regulator HTH, LysR VCD_000687 IPR036390 Winged helix DNA-binding domain superfamily VCD_000689 IPR009707 Membrane protein GlpM/YdgC VCD_000692 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VCD_000692 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCD_000692 IPR036291 NAD(P)-binding domain superfamily VCD_000692 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCD_000694 IPR004027 SEC-C motif VCD_000694 IPR036670 SecA, preprotein cross-linking domain superfamily VCD_000694 IPR000185 Protein translocase subunit SecA VCD_000694 IPR020937 SecA conserved site VCD_000694 IPR036266 SecA, Wing/Scaffold superfamily VCD_000694 IPR011116 SecA Wing/Scaffold VCD_000694 IPR011115 SecA DEAD-like, N-terminal VCD_000694 IPR011130 SecA, preprotein cross-linking domain VCD_000694 IPR014018 SecA motor DEAD VCD_000694 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000697 IPR029061 Thiamin diphosphate-binding fold VCD_000697 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VCD_000697 IPR005475 Transketolase-like, pyrimidine-binding domain VCD_000697 IPR033247 Transketolase family VCD_000697 IPR020826 Transketolase binding site VCD_000697 IPR005478 Transketolase, bacterial-like VCD_000697 IPR005474 Transketolase, N-terminal VCD_000697 IPR033248 Transketolase, C-terminal domain VCD_000698 IPR001585 Transaldolase/Fructose-6-phosphate aldolase VCD_000698 IPR013785 Aldolase-type TIM barrel VCD_000698 IPR004730 Transaldolase type 1 VCD_000698 IPR018225 Transaldolase, active site VCD_000700 IPR007324 Sugar-binding domain, putative VCD_000700 IPR037171 NagB/RpiA transferase-like VCD_000700 IPR013324 RNA polymerase sigma factor, region 3/4-like VCD_000701 IPR001763 Rhodanese-like domain VCD_000701 IPR036873 Rhodanese-like domain superfamily VCD_000701 IPR001307 Thiosulphate sulfurtransferase, conserved site VCD_000703 IPR000594 THIF-type NAD/FAD binding fold VCD_000703 IPR012730 Molybdopterin synthase sulfurylase MoeB VCD_000703 IPR035985 Ubiquitin-activating enzyme VCD_000704 IPR005111 MoeA, C-terminal, domain IV VCD_000704 IPR036135 MoeA, N-terminal and linker domain superfamily VCD_000704 IPR036688 MoeA, C-terminal, domain IV superfamily VCD_000704 IPR038987 Molybdopterin biosynthesis protein MoeA-like VCD_000704 IPR008284 Molybdenum cofactor biosynthesis, conserved site VCD_000704 IPR005110 MoeA, N-terminal and linker domain VCD_000704 IPR001453 MoaB/Mog domain VCD_000704 IPR036425 MoaB/Mog-like domain superfamily VCD_000705 IPR001474 GTP cyclohydrolase I VCD_000705 IPR020602 GTP cyclohydrolase I domain VCD_000705 IPR018234 GTP cyclohydrolase I, conserved site VCD_000706 IPR002579 Peptide methionine sulphoxide reductase MrsB VCD_000706 IPR011057 Mss4-like superfamily VCD_000706 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily VCD_000706 IPR002569 Peptide methionine sulphoxide reductase MsrA VCD_000706 IPR028427 Peptide methionine sulfoxide reductase VCD_000707 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000707 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site VCD_000707 IPR000559 Formate-tetrahydrofolate ligase, FTHFS VCD_000708 IPR019823 Large-conductance mechanosensitive channel, conserved site VCD_000708 IPR036019 Gated mechanosensitive channel VCD_000708 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L VCD_000708 IPR001185 Large-conductance mechanosensitive channel VCD_000709 IPR029062 Class I glutamine amidotransferase-like VCD_000709 IPR026041 Glyoxalase ElbB VCD_000711 IPR041492 Haloacid dehalogenase-like hydrolase VCD_000711 IPR023214 HAD superfamily VCD_000711 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB VCD_000711 IPR006439 HAD hydrolase, subfamily IA VCD_000711 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VCD_000711 IPR036412 HAD-like superfamily VCD_000712 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain VCD_000712 IPR028625 Regulator of nucleoside diphosphate kinase VCD_000712 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VCD_000712 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VCD_000712 IPR023459 Transcription elongation factor GreA/GreB family VCD_000713 IPR006323 Phosphonoacetaldehyde hydrolase VCD_000713 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VCD_000713 IPR023214 HAD superfamily VCD_000713 IPR041492 Haloacid dehalogenase-like hydrolase VCD_000713 IPR036412 HAD-like superfamily VCD_000713 IPR006439 HAD hydrolase, subfamily IA VCD_000715 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VCD_000715 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000715 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000715 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000715 IPR012703 2-aminoethylphosphonate--pyruvate transaminase VCD_000715 IPR000192 Aminotransferase class V domain VCD_000717 IPR003593 AAA+ ATPase domain VCD_000717 IPR008995 Molybdate/tungstate binding, C-terminal VCD_000717 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000717 IPR015853 ABC transporter, ferric cation import, FbpC VCD_000717 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 VCD_000717 IPR017871 ABC transporter, conserved site VCD_000717 IPR003439 ABC transporter-like VCD_000718 IPR035906 MetI-like superfamily VCD_000718 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000719 IPR000524 Transcription regulator HTH, GntR VCD_000719 IPR017722 Phosphonate utilization transcriptional regulator PhnR VCD_000719 IPR011663 UbiC transcription regulator-associated VCD_000719 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000719 IPR036390 Winged helix DNA-binding domain superfamily VCD_000719 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VCD_000721 IPR005279 Dipeptide/tripeptide permease VCD_000721 IPR036259 MFS transporter superfamily VCD_000721 IPR000109 Proton-dependent oligopeptide transporter family VCD_000721 IPR020846 Major facilitator superfamily domain VCD_000721 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VCD_000726 IPR000914 Solute-binding protein family 5 domain VCD_000726 IPR039424 Solute-binding protein family 5 VCD_000726 IPR030678 Peptide/nickel binding protein, MppA-type VCD_000727 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000727 IPR035906 MetI-like superfamily VCD_000728 IPR035906 MetI-like superfamily VCD_000728 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_000728 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCD_000729 IPR003593 AAA+ ATPase domain VCD_000729 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_000729 IPR017871 ABC transporter, conserved site VCD_000729 IPR003439 ABC transporter-like VCD_000729 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000730 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase VCD_000730 IPR038009 GlmU, C-terminal LbH domain VCD_000730 IPR001451 Hexapeptide repeat VCD_000730 IPR005175 PPC domain VCD_000730 IPR011004 Trimeric LpxA-like superfamily VCD_000730 IPR025877 MobA-like NTP transferase VCD_000730 IPR029044 Nucleotide-diphospho-sugar transferases VCD_000733 IPR036249 Thioredoxin-like superfamily VCD_000733 IPR010987 Glutathione S-transferase, C-terminal-like VCD_000733 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VCD_000733 IPR004045 Glutathione S-transferase, N-terminal VCD_000733 IPR004046 Glutathione S-transferase, C-terminal VCD_000738 IPR003736 Phenylacetic acid degradation-related domain VCD_000738 IPR029069 HotDog domain superfamily VCD_000738 IPR006683 Thioesterase domain VCD_000741 IPR036390 Winged helix DNA-binding domain superfamily VCD_000741 IPR023767 Transcriptional regulator SgrR VCD_000741 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VCD_000741 IPR039424 Solute-binding protein family 5 VCD_000741 IPR000914 Solute-binding protein family 5 domain VCD_000742 IPR039426 Vitamin B12 transporter BtuB-like VCD_000742 IPR037066 TonB-dependent receptor, plug domain superfamily VCD_000742 IPR000531 TonB-dependent receptor-like, beta-barrel VCD_000742 IPR012910 TonB-dependent receptor, plug domain VCD_000742 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor VCD_000742 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VCD_000743 IPR036390 Winged helix DNA-binding domain superfamily VCD_000743 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000743 IPR000847 Transcription regulator HTH, LysR VCD_000743 IPR005119 LysR, substrate-binding VCD_000744 IPR003781 CoA-binding VCD_000744 IPR011761 ATP-grasp fold VCD_000744 IPR013815 ATP-grasp fold, subdomain 1 VCD_000744 IPR016181 Acyl-CoA N-acyltransferase VCD_000744 IPR036291 NAD(P)-binding domain superfamily VCD_000744 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VCD_000744 IPR016102 Succinyl-CoA synthetase-like VCD_000744 IPR000182 GNAT domain VCD_000746 IPR011761 ATP-grasp fold VCD_000746 IPR005905 D-alanine--D-alanine ligase VCD_000746 IPR011095 D-alanine--D-alanine ligase, C-terminal VCD_000746 IPR016185 Pre-ATP-grasp domain superfamily VCD_000746 IPR011127 D-alanine--D-alanine ligase, N-terminal domain VCD_000746 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site VCD_000746 IPR013815 ATP-grasp fold, subdomain 1 VCD_000748 IPR005872 Archaeal/bacterial translation initiation factor SUI1 VCD_000748 IPR036877 SUI1 domain superfamily VCD_000748 IPR001950 SUI1 domain VCD_000749 IPR001835 Heat-labile enterotoxin, B chain VCD_000749 IPR008992 Enterotoxin VCD_000750 IPR001144 Heat-labile enterotoxin, A chain VCD_000751 IPR008900 Zona occludens toxin, N-terminal VCD_000752 IPR019670 Protein of unkown function DUF2523 VCD_000753 IPR032014 Vibrio phage CTXphi pIII, N-terminal N1 domain VCD_000753 IPR038618 CTXphi pIII, N1 domain superfamily VCD_000757 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_000757 IPR001387 Cro/C1-type helix-turn-helix domain VCD_000759 IPR005371 Uncharacterised protein family UPF0181 VCD_000762 IPR001789 Signal transduction response regulator, receiver domain VCD_000762 IPR011006 CheY-like superfamily VCD_000762 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_000762 IPR016032 Signal transduction response regulator, C-terminal effector VCD_000762 IPR039420 Transcriptional regulatory protein WalR-like VCD_000762 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000764 IPR034300 NADP transhydrogenase beta-like domain VCD_000764 IPR029035 DHS-like NAD/FAD-binding domain superfamily VCD_000764 IPR012136 NADP transhydrogenase, beta subunit VCD_000765 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VCD_000765 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal VCD_000765 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VCD_000765 IPR036291 NAD(P)-binding domain superfamily VCD_000765 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 VCD_000765 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 VCD_000765 IPR026255 NAD(P) transhydrogenase, alpha subunit VCD_000768 IPR000160 GGDEF domain VCD_000768 IPR033424 Membrane-associated sensor domain VCD_000768 IPR029787 Nucleotide cyclase VCD_000770 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_000771 IPR029787 Nucleotide cyclase VCD_000771 IPR000160 GGDEF domain VCD_000771 IPR033416 Periplasmic sensor domain CHASE7 VCD_000778 IPR013988 PhnA protein, C-terminal VCD_000778 IPR004624 PhnA protein VCD_000778 IPR013987 PhnA protein, N-terminal VCD_000781 IPR005496 Integral membrane protein TerC VCD_000781 IPR022369 Integral membrane protein TerC, riboswitch-linked VCD_000782 IPR029052 Metallo-dependent phosphatase-like VCD_000782 IPR006179 5'-Nucleotidase/apyrase VCD_000782 IPR006146 5'-Nucleotidase, conserved site VCD_000782 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VCD_000782 IPR008334 5'-Nucleotidase, C-terminal VCD_000782 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN VCD_000782 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VCD_000783 IPR006171 TOPRIM domain VCD_000783 IPR034139 OLD protein-like, TOPRIM domain VCD_000783 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000783 IPR022602 Protein of unknown function DUF2813 VCD_000784 IPR009476 Protein of unknown function DUF1097 VCD_000785 IPR005119 LysR, substrate-binding VCD_000785 IPR000847 Transcription regulator HTH, LysR VCD_000785 IPR036390 Winged helix DNA-binding domain superfamily VCD_000785 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000787 IPR024002 Formate/nitrite transporter, conserved site VCD_000787 IPR000292 Formate/nitrite transporter VCD_000787 IPR023999 Formate transporter FocA, putative VCD_000787 IPR023271 Aquaporin-like VCD_000788 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VCD_000788 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VCD_000788 IPR023480 Uncharacterised protein family UPF0312/YceI VCD_000789 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase VCD_000789 IPR016174 Di-haem cytochrome, transmembrane VCD_000791 IPR018842 YkuI, C-terminal VCD_000791 IPR029151 Periplasmic sensor-like domain superfamily VCD_000791 IPR035919 EAL domain superfamily VCD_000791 IPR001633 EAL domain VCD_000794 IPR032818 DedA family VCD_000794 IPR032816 SNARE associated Golgi protein VCD_000795 IPR024905 Sec-independent protein translocase protein TatE VCD_000795 IPR006312 Sec-independent protein translocase protein TatA/E VCD_000795 IPR003369 Sec-independent protein translocase protein TatA/B/E VCD_000796 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_000796 IPR011006 CheY-like superfamily VCD_000796 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_000796 IPR001789 Signal transduction response regulator, receiver domain VCD_000796 IPR039420 Transcriptional regulatory protein WalR-like VCD_000797 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal VCD_000797 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000797 IPR005467 Histidine kinase domain VCD_000797 IPR038318 KdpD, transmembrane domain superfamily VCD_000797 IPR025201 Sensor protein KdpD, transmembrane domain VCD_000797 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000797 IPR029016 GAF-like domain superfamily VCD_000797 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000797 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000797 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000797 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000798 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal VCD_000798 IPR011895 Pyruvate-flavodoxin oxidoreductase VCD_000798 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain VCD_000798 IPR029061 Thiamin diphosphate-binding fold VCD_000798 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VCD_000798 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain VCD_000798 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain VCD_000798 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily VCD_000798 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II VCD_000798 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_000798 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_000798 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VCD_000799 IPR003855 Potassium transporter VCD_000799 IPR023051 Potassium uptake protein, low affinity, Kup VCD_000800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000800 IPR016478 GTPase, MTG1 VCD_000800 IPR006073 GTP binding domain VCD_000800 IPR019991 GTP-binding protein, ribosome biogenesis VCD_000800 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VCD_000800 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VCD_000801 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VCD_000801 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000801 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VCD_000802 IPR001807 Chloride channel, voltage gated VCD_000802 IPR023861 Chloride channel, ClcA VCD_000802 IPR014743 Chloride channel, core VCD_000804 IPR004839 Aminotransferase, class I/classII VCD_000804 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000804 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000804 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_000805 IPR005467 Histidine kinase domain VCD_000805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_000805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_000805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_000805 IPR001789 Signal transduction response regulator, receiver domain VCD_000805 IPR011006 CheY-like superfamily VCD_000805 IPR003594 Histidine kinase/HSP90-like ATPase VCD_000806 IPR038729 Rad50/SbcC-type AAA domain VCD_000806 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_000807 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain VCD_000807 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VCD_000807 IPR029052 Metallo-dependent phosphatase-like VCD_000807 IPR004593 Nuclease SbcCD subunit D VCD_000807 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VCD_000808 IPR001761 Periplasmic binding protein/LacI sugar binding domain VCD_000808 IPR012781 D-fructose-responsive transcription factor VCD_000808 IPR000843 LacI-type HTH domain VCD_000808 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_000808 IPR028082 Periplasmic binding protein-like I VCD_000809 IPR000032 Phosphocarrier protein HPr-like VCD_000809 IPR002178 PTS EIIA type-2 domain VCD_000809 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VCD_000809 IPR035895 HPr-like superfamily VCD_000809 IPR016152 Phosphotransferase/anion transporter VCD_000809 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VCD_000810 IPR022463 Fructose 1-phosphate kinase VCD_000810 IPR029056 Ribokinase-like VCD_000810 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VCD_000810 IPR011611 Carbohydrate kinase PfkB VCD_000810 IPR017583 Tagatose/fructose phosphokinase VCD_000811 IPR003352 Phosphotransferase system, EIIC VCD_000811 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VCD_000811 IPR013011 Phosphotransferase system, EIIB component, type 2 VCD_000811 IPR036095 PTS system IIB component-like superfamily VCD_000811 IPR013014 Phosphotransferase system, EIIC component, type 2 VCD_000811 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VCD_000811 IPR006327 Phosphotransferase system, fructose IIC component VCD_000813 IPR011761 ATP-grasp fold VCD_000813 IPR013651 ATP-grasp fold, RimK-type VCD_000813 IPR013815 ATP-grasp fold, subdomain 1 VCD_000813 IPR021109 Aspartic peptidase domain superfamily VCD_000813 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VCD_000813 IPR041107 RimK, PreATP-grasp domain VCD_000813 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VCD_000814 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000814 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000814 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000814 IPR004839 Aminotransferase, class I/classII VCD_000814 IPR000796 Aspartate/other aminotransferase VCD_000815 IPR013785 Aldolase-type TIM barrel VCD_000815 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic VCD_000815 IPR034457 Organic radical-activating enzymes VCD_000815 IPR001989 Radical-activating enzyme, conserved site VCD_000815 IPR007197 Radical SAM VCD_000816 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic VCD_000816 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VCD_000816 IPR005144 ATP-cone domain VCD_000816 IPR001150 Glycine radical domain VCD_000818 IPR036397 Ribonuclease H superfamily VCD_000818 IPR012337 Ribonuclease H-like superfamily VCD_000818 IPR038965 Transposase InsF-like VCD_000818 IPR001584 Integrase, catalytic core VCD_000819 IPR002514 Transposase IS3/IS911family VCD_000819 IPR009057 Homeobox-like domain superfamily VCD_000820 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_000820 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_000820 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_000832 IPR002686 Transposase IS200-like VCD_000832 IPR036515 Transposase IS200-like superfamily VCD_000849 IPR033140 Lipase, GDXG, putative serine active site VCD_000849 IPR002168 Lipase, GDXG, putative histidine active site VCD_000849 IPR023508 Acetyl esterase VCD_000849 IPR013094 Alpha/beta hydrolase fold-3 VCD_000849 IPR029058 Alpha/Beta hydrolase fold VCD_000861 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VCD_000861 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VCD_000863 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_000863 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_000863 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_000866 IPR011004 Trimeric LpxA-like superfamily VCD_000866 IPR018357 Hexapeptide transferase, conserved site VCD_000866 IPR001451 Hexapeptide repeat VCD_000867 IPR002559 Transposase, IS4-like VCD_000867 IPR008490 Transposase InsH, N-terminal VCD_000869 IPR001387 Cro/C1-type helix-turn-helix domain VCD_000869 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_000869 IPR032758 Antitoxin MqsA/HigA-2 VCD_000870 IPR009387 Toxin HigB-2 VCD_000873 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_000873 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_000873 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_000881 IPR005669 Thiosulphate/Sulfate-binding protein VCD_000881 IPR034408 Sulphate/thiosulphate-binding site VCD_000881 IPR000957 Sulphate/thiosulphate-binding, conserved site VCD_000885 IPR001091 Restriction/modification DNA-methylase VCD_000885 IPR002941 DNA methylase N-4/N-6 VCD_000885 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_000885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_000888 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VCD_000888 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VCD_000889 IPR012674 Calycin VCD_000889 IPR022271 Lipocalin, ApoD type VCD_000889 IPR002446 Lipocalin, bacterial VCD_000889 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VCD_000889 IPR022272 Lipocalin family conserved site VCD_000892 IPR040449 LD-carboxypeptidase, N-terminal VCD_000892 IPR040921 LD-carboxypeptidase, C-terminal VCD_000892 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal VCD_000892 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VCD_000892 IPR003507 Peptidase family S66 VCD_000892 IPR029062 Class I glutamine amidotransferase-like VCD_000895 IPR013430 Toxin-antitoxin system, antidote protein, HigA VCD_000895 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_000895 IPR001387 Cro/C1-type helix-turn-helix domain VCD_000896 IPR007711 Toxin HigB-1 VCD_000896 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VCD_000902 IPR000182 GNAT domain VCD_000902 IPR016181 Acyl-CoA N-acyltransferase VCD_000917 IPR002514 Transposase IS3/IS911family VCD_000917 IPR009057 Homeobox-like domain superfamily VCD_000918 IPR001584 Integrase, catalytic core VCD_000918 IPR012337 Ribonuclease H-like superfamily VCD_000918 IPR036397 Ribonuclease H superfamily VCD_000918 IPR038965 Transposase InsF-like VCD_000930 IPR001123 Amino acid exporter protein, LeuE-type VCD_000930 IPR004778 Homoserine/Threonine efflux protein VCD_000931 IPR007344 GrpB/Dephospho-CoA kinase VCD_000933 IPR022271 Lipocalin, ApoD type VCD_000933 IPR012674 Calycin VCD_000933 IPR002446 Lipocalin, bacterial VCD_000933 IPR022272 Lipocalin family conserved site VCD_000933 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VCD_000936 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_000936 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_000936 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_000941 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_000941 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_000941 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_000944 IPR040921 LD-carboxypeptidase, C-terminal VCD_000944 IPR029062 Class I glutamine amidotransferase-like VCD_000944 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VCD_000944 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal VCD_000944 IPR003507 Peptidase family S66 VCD_000944 IPR040449 LD-carboxypeptidase, N-terminal VCD_000952 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_000952 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_000952 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_000963 IPR022271 Lipocalin, ApoD type VCD_000963 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VCD_000963 IPR012674 Calycin VCD_000963 IPR002446 Lipocalin, bacterial VCD_000963 IPR022272 Lipocalin family conserved site VCD_000964 IPR000182 GNAT domain VCD_000964 IPR016181 Acyl-CoA N-acyltransferase VCD_000966 IPR020084 NUDIX hydrolase, conserved site VCD_000966 IPR000086 NUDIX hydrolase domain VCD_000966 IPR020476 NUDIX hydrolase VCD_000966 IPR015797 NUDIX hydrolase-like domain superfamily VCD_000966 IPR014078 Nucleoside triphosphatase YtkD VCD_000970 IPR006261 dNTP triphosphohydrolase VCD_000970 IPR006674 HD domain VCD_000970 IPR003607 HD/PDEase domain VCD_000970 IPR023023 dNTP triphosphohydrolase, type 2 VCD_000970 IPR026875 Phosphohydrolase-associated domain VCD_000979 IPR036291 NAD(P)-binding domain superfamily VCD_000979 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_000979 IPR002347 Short-chain dehydrogenase/reductase SDR VCD_000980 IPR011004 Trimeric LpxA-like superfamily VCD_000980 IPR018357 Hexapeptide transferase, conserved site VCD_000980 IPR001451 Hexapeptide repeat VCD_000984 IPR004107 Integrase, SAM-like, N-terminal VCD_000984 IPR010998 Integrase/recombinase, N-terminal VCD_000984 IPR011010 DNA breaking-rejoining enzyme, catalytic core VCD_000984 IPR013762 Integrase-like, catalytic domain superfamily VCD_000984 IPR002104 Integrase, catalytic domain VCD_000984 IPR011946 Integrase, integron-type VCD_000985 IPR035566 Ribosomal protein L20, C-terminal VCD_000985 IPR005813 Ribosomal protein L20 VCD_000986 IPR018265 Ribosomal protein L35, conserved site VCD_000986 IPR001706 Ribosomal protein L35, non-mitochondrial VCD_000986 IPR037229 Ribosomal protein L35 superfamily VCD_000986 IPR021137 Ribosomal protein L35 VCD_000987 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily VCD_000987 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily VCD_000987 IPR019813 Translation initiation factor 3, conserved site VCD_000987 IPR001288 Translation initiation factor 3 VCD_000987 IPR019815 Translation initiation factor 3, C-terminal VCD_000987 IPR019814 Translation initiation factor 3, N-terminal VCD_000988 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_000988 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VCD_000988 IPR033728 Threonine-tRNA ligase catalytic core domain VCD_000988 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily VCD_000988 IPR002320 Threonine-tRNA ligase, class IIa VCD_000988 IPR012676 TGS-like VCD_000988 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VCD_000988 IPR012675 Beta-grasp domain superfamily VCD_000988 IPR036621 Anticodon-binding domain superfamily VCD_000988 IPR004154 Anticodon-binding VCD_000988 IPR004095 TGS VCD_000992 IPR008490 Transposase InsH, N-terminal VCD_000992 IPR002559 Transposase, IS4-like VCD_000994 IPR022903 Glycine cleavage system T protein, bacteria VCD_000994 IPR006223 Glycine cleavage system T protein VCD_000994 IPR028896 Aminomethyltransferase-like VCD_000994 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain VCD_000994 IPR006222 Aminomethyltransferase, folate-binding domain VCD_000994 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VCD_000994 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VCD_000996 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000996 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000996 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000996 IPR001085 Serine hydroxymethyltransferase VCD_000996 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VCD_000996 IPR039429 Serine hydroxymethyltransferase-like domain VCD_000997 IPR002930 Glycine cleavage system H-protein VCD_000997 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VCD_000997 IPR017453 Glycine cleavage system H-protein, subgroup VCD_000997 IPR000089 Biotin/lipoyl attachment VCD_000997 IPR011053 Single hybrid motif VCD_000997 IPR033753 Glycine cleavage system H-protein/Simiate VCD_000998 IPR020581 Glycine cleavage system P protein VCD_000998 IPR003437 Glycine dehydrogenase (decarboxylating) VCD_000998 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_000998 IPR015424 Pyridoxal phosphate-dependent transferase VCD_000998 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_000999 IPR036515 Transposase IS200-like superfamily VCD_000999 IPR002686 Transposase IS200-like VCD_001000 IPR001148 Alpha carbonic anhydrase domain VCD_001000 IPR023561 Carbonic anhydrase, alpha-class VCD_001000 IPR041891 Carbonic anhydrase, prokaryotic-like VCD_001000 IPR018338 Carbonic anhydrase, alpha-class, conserved site VCD_001000 IPR036398 Alpha carbonic anhydrase domain superfamily VCD_001003 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VCD_001003 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily VCD_001003 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VCD_001003 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VCD_001003 IPR015956 Penicillin-binding protein, C-terminal domain superfamily VCD_001003 IPR012338 Beta-lactamase/transpeptidase-like VCD_001005 IPR004090 Chemotaxis methyl-accepting receptor VCD_001005 IPR003660 HAMP domain VCD_001005 IPR033479 Double Cache domain 1 VCD_001005 IPR000727 Target SNARE coiled-coil homology domain VCD_001005 IPR029151 Periplasmic sensor-like domain superfamily VCD_001005 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_001006 IPR036259 MFS transporter superfamily VCD_001006 IPR020846 Major facilitator superfamily domain VCD_001006 IPR011701 Major facilitator superfamily VCD_001006 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VCD_001009 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001015 IPR003660 HAMP domain VCD_001015 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001015 IPR029150 Double Cache domain 3 VCD_001015 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_001015 IPR000014 PAS domain VCD_001015 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_001015 IPR005467 Histidine kinase domain VCD_001015 IPR000700 PAS-associated, C-terminal VCD_001015 IPR035965 PAS domain superfamily VCD_001015 IPR029151 Periplasmic sensor-like domain superfamily VCD_001015 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_001016 IPR039420 Transcriptional regulatory protein WalR-like VCD_001016 IPR011006 CheY-like superfamily VCD_001016 IPR001789 Signal transduction response regulator, receiver domain VCD_001016 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001016 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_001018 IPR003700 Ketopantoate hydroxymethyltransferase VCD_001018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_001018 IPR040442 Pyruvate kinase-like domain superfamily VCD_001019 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001019 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain VCD_001019 IPR004821 Cytidyltransferase-like domain VCD_001019 IPR003721 Pantoate-beta-alanine ligase VCD_001020 IPR000412 ABC-2 transporter VCD_001020 IPR013525 ABC-2 type transporter VCD_001021 IPR003439 ABC transporter-like VCD_001021 IPR017871 ABC transporter, conserved site VCD_001021 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001021 IPR003593 AAA+ ATPase domain VCD_001022 IPR011547 SLC26A/SulP transporter domain VCD_001022 IPR001902 SLC26A/SulP transporter VCD_001022 IPR002645 STAS domain VCD_001022 IPR036513 STAS domain superfamily VCD_001023 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site VCD_001023 IPR001765 Carbonic anhydrase VCD_001023 IPR036874 Carbonic anhydrase superfamily VCD_001024 IPR029057 Phosphoribosyltransferase-like VCD_001024 IPR000836 Phosphoribosyltransferase domain VCD_001024 IPR005904 Hypoxanthine phosphoribosyl transferase VCD_001025 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VCD_001025 IPR009057 Homeobox-like domain superfamily VCD_001025 IPR001647 DNA-binding HTH domain, TetR-type VCD_001026 IPR018063 SAM-dependent methyltransferase RsmI, conserved site VCD_001026 IPR000878 Tetrapyrrole methylase VCD_001026 IPR035996 Tetrapyrrole methylase superfamily VCD_001026 IPR014777 Tetrapyrrole methylase, subdomain 1 VCD_001026 IPR008189 rRNA small subunit methyltransferase I VCD_001026 IPR014776 Tetrapyrrole methylase, subdomain 2 VCD_001027 IPR007443 Penicillin-binding protein activator LpoA VCD_001027 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_001027 IPR028082 Periplasmic binding protein-like I VCD_001028 IPR003509 Uncharacterised protein family UPF0102 VCD_001028 IPR011856 tRNA endonuclease-like domain superfamily VCD_001028 IPR011335 Restriction endonuclease type II-like VCD_001029 IPR035461 GmhA/DiaA VCD_001029 IPR023070 DnaA initiator-associating protein VCD_001029 IPR001347 Sugar isomerase (SIS) VCD_001030 IPR014004 Transport-associated and nodulation domain, bacteria VCD_001030 IPR007055 BON domain VCD_001031 IPR007481 Stringent starvation protein B VCD_001031 IPR036760 SspB-like superfamily VCD_001032 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VCD_001032 IPR040079 Glutathione Transferase family VCD_001032 IPR004045 Glutathione S-transferase, N-terminal VCD_001032 IPR004046 Glutathione S-transferase, C-terminal VCD_001032 IPR034341 Stringent starvation protein A, N-terminal VCD_001032 IPR010987 Glutathione S-transferase, C-terminal-like VCD_001032 IPR036249 Thioredoxin-like superfamily VCD_001033 IPR002326 Cytochrome c1 VCD_001033 IPR036909 Cytochrome c-like domain superfamily VCD_001033 IPR009056 Cytochrome c-like domain VCD_001034 IPR030689 Cytochrome b VCD_001034 IPR027387 Cytochrome b/b6-like domain superfamily VCD_001034 IPR005797 Cytochrome b/b6, N-terminal VCD_001034 IPR036150 Cytochrome b/b6, C-terminal domain superfamily VCD_001034 IPR005798 Cytochrome b/b6, C-terminal VCD_001034 IPR016174 Di-haem cytochrome, transmembrane VCD_001035 IPR005805 Rieske iron-sulphur protein, C-terminal VCD_001035 IPR014349 Rieske iron-sulphur protein VCD_001035 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily VCD_001035 IPR017941 Rieske [2Fe-2S] iron-sulphur domain VCD_001035 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit VCD_001035 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal VCD_001036 IPR023035 Ribosomal protein S9, bacterial/plastid VCD_001036 IPR020574 Ribosomal protein S9, conserved site VCD_001036 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001036 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001036 IPR000754 Ribosomal protein S9 VCD_001037 IPR005822 Ribosomal protein L13 VCD_001037 IPR005823 Ribosomal protein L13, bacterial-type VCD_001037 IPR023563 Ribosomal protein L13, conserved site VCD_001037 IPR036899 Ribosomal protein L13 superfamily VCD_001038 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001038 IPR005654 ATPase, AFG1-like VCD_001038 IPR030870 Cell division protein ZapE VCD_001040 IPR001478 PDZ domain VCD_001040 IPR036034 PDZ superfamily VCD_001040 IPR001940 Peptidase S1C VCD_001040 IPR009003 Peptidase S1, PA clan VCD_001040 IPR011782 Peptidase S1C, Do VCD_001041 IPR001478 PDZ domain VCD_001041 IPR009003 Peptidase S1, PA clan VCD_001041 IPR011783 Peptidase S1C, DegS VCD_001041 IPR036034 PDZ superfamily VCD_001041 IPR001940 Peptidase S1C VCD_001042 IPR001857 Ribosomal protein L19 VCD_001042 IPR038657 Ribosomal protein L19 superfamily VCD_001042 IPR008991 Translation protein SH3-like domain superfamily VCD_001042 IPR018257 Ribosomal protein L19, conserved site VCD_001043 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria VCD_001043 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal VCD_001043 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCD_001043 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain VCD_001043 IPR029028 Alpha/beta knot methyltransferases VCD_001044 IPR009000 Translation protein, beta-barrel domain superfamily VCD_001044 IPR036976 RimM, N-terminal domain superfamily VCD_001044 IPR002676 RimM, N-terminal VCD_001044 IPR011033 PRC-barrel-like superfamily VCD_001044 IPR027275 PRC-barrel domain VCD_001044 IPR011961 16S rRNA processing protein RimM VCD_001045 IPR023803 Ribosomal protein S16 domain superfamily VCD_001045 IPR020592 Ribosomal protein S16, conserved site VCD_001045 IPR000307 Ribosomal protein S16 VCD_001046 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VCD_001046 IPR003593 AAA+ ATPase domain VCD_001046 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001046 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily VCD_001046 IPR013822 Signal recognition particle SRP54, helical bundle VCD_001046 IPR004125 Signal recognition particle, SRP54 subunit, M-domain VCD_001046 IPR004780 Signal recognition particle protein VCD_001046 IPR022941 Signal recognition particle, SRP54 subunit VCD_001046 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily VCD_001047 IPR002541 Cytochrome c assembly protein VCD_001048 IPR036318 FAD-binding, type PCMH-like superfamily VCD_001048 IPR000644 CBS domain VCD_001048 IPR016169 FAD-binding, type PCMH, subdomain 2 VCD_001048 IPR005170 Transporter-associated domain VCD_001048 IPR002550 CNNM, transmembrane domain VCD_001049 IPR003815 S-ribosylhomocysteinase (LuxS) VCD_001049 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VCD_001049 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily VCD_001050 IPR006334 Glutamate--cysteine ligase, monofunctional VCD_001050 IPR007370 Glutamate--cysteine ligase VCD_001050 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VCD_001051 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VCD_001051 IPR011765 Peptidase M16, N-terminal VCD_001051 IPR001431 Peptidase M16, zinc-binding site VCD_001051 IPR007863 Peptidase M16, C-terminal VCD_001052 IPR032816 SNARE associated Golgi protein VCD_001054 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit VCD_001055 IPR013785 Aldolase-type TIM barrel VCD_001055 IPR011053 Single hybrid motif VCD_001055 IPR000891 Pyruvate carboxyltransferase VCD_001055 IPR005776 Oxaloacetate decarboxylase, alpha subunit VCD_001055 IPR003379 Carboxylase, conserved domain VCD_001055 IPR000089 Biotin/lipoyl attachment VCD_001055 IPR001882 Biotin-binding site VCD_001056 IPR023424 Oxaloacetate decarboxylase gamma chain, probable VCD_001056 IPR005899 Sodium ion-translocating decarboxylase VCD_001057 IPR036107 Carbon storage regulator superfamily VCD_001057 IPR003751 Translational regulator CsrA VCD_001058 IPR001341 Aspartate kinase VCD_001058 IPR018042 Aspartate kinase, conserved site VCD_001058 IPR036393 Acetylglutamate kinase-like superfamily VCD_001058 IPR002912 ACT domain VCD_001058 IPR027795 CASTOR, ACT domain VCD_001058 IPR005260 Aspartate kinase, monofunctional class VCD_001058 IPR001048 Aspartate/glutamate/uridylate kinase VCD_001058 IPR041740 Aspartokinase catalytic domain VCD_001060 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily VCD_001060 IPR002318 Alanine-tRNA ligase, class IIc VCD_001060 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily VCD_001060 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain VCD_001060 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal VCD_001060 IPR009000 Translation protein, beta-barrel domain superfamily VCD_001060 IPR003156 DHHA1 domain VCD_001060 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria VCD_001060 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VCD_001061 IPR003783 Regulatory protein RecX VCD_001061 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001062 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface VCD_001062 IPR023400 DNA recombination and repair protein RecA, C-terminal VCD_001062 IPR003593 AAA+ ATPase domain VCD_001062 IPR013765 DNA recombination and repair protein RecA VCD_001062 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain VCD_001062 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001062 IPR020584 DNA recombination/repair protein RecA, conserved site VCD_001063 IPR008136 CinA, C-terminal VCD_001063 IPR036653 CinA-like, C-terminal VCD_001064 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001064 IPR003593 AAA+ ATPase domain VCD_001064 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal VCD_001064 IPR003439 ABC transporter-like VCD_001064 IPR017871 ABC transporter, conserved site VCD_001064 IPR024765 TOBE-like domain VCD_001064 IPR005666 Sulphate transport system permease protein 1 VCD_001064 IPR008995 Molybdate/tungstate binding, C-terminal VCD_001065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_001065 IPR005667 Sulphate ABC transporter permease protein 2 VCD_001065 IPR035906 MetI-like superfamily VCD_001065 IPR011866 Sulphate ABC transporter, permease protein CysW VCD_001066 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_001066 IPR035906 MetI-like superfamily VCD_001066 IPR011865 Sulphate ABC transporter, permease protein CysT VCD_001066 IPR005667 Sulphate ABC transporter permease protein 2 VCD_001067 IPR005669 Thiosulphate/Sulfate-binding protein VCD_001067 IPR034408 Sulphate/thiosulphate-binding site VCD_001067 IPR000957 Sulphate/thiosulphate-binding, conserved site VCD_001069 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCD_001069 IPR001926 Pyridoxal-phosphate dependent enzyme VCD_001069 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VCD_001069 IPR005858 Cysteine synthase CysM VCD_001069 IPR005856 Cysteine synthase VCD_001070 IPR005748 DNA mismatch repair protein MutS VCD_001070 IPR007695 DNA mismatch repair protein MutS-like, N-terminal VCD_001070 IPR016151 DNA mismatch repair protein MutS, N-terminal VCD_001070 IPR007861 DNA mismatch repair protein MutS, clamp VCD_001070 IPR000432 DNA mismatch repair protein MutS, C-terminal VCD_001070 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001070 IPR036678 MutS, connector domain superfamily VCD_001070 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VCD_001070 IPR007860 DNA mismatch repair protein MutS, connector domain VCD_001070 IPR007696 DNA mismatch repair protein MutS, core VCD_001070 IPR017261 DNA mismatch repair protein MutS/MSH VCD_001071 IPR007624 RNA polymerase sigma-70 region 3 VCD_001071 IPR007630 RNA polymerase sigma-70 region 4 VCD_001071 IPR013325 RNA polymerase sigma factor, region 2 VCD_001071 IPR013324 RNA polymerase sigma factor, region 3/4-like VCD_001071 IPR000943 RNA polymerase sigma-70 VCD_001071 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001071 IPR014284 RNA polymerase sigma-70 like domain VCD_001071 IPR007627 RNA polymerase sigma-70 region 2 VCD_001071 IPR012761 RNA polymerase sigma factor RpoS VCD_001071 IPR009042 RNA polymerase sigma-70 region 1.2 VCD_001072 IPR018392 LysM domain VCD_001072 IPR011055 Duplicated hybrid motif VCD_001072 IPR036779 LysM domain superfamily VCD_001072 IPR016047 Peptidase M23 VCD_001073 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase VCD_001073 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001074 IPR002828 Survival protein SurE-like phosphatase/nucleotidase VCD_001074 IPR030048 Survival protein SurE VCD_001074 IPR036523 SurE-like phosphatase/nucleotidase superfamily VCD_001075 IPR042214 Pseudouridine synthase, TruD, catalytic domain VCD_001075 IPR011760 Pseudouridine synthase, TruD, insertion domain VCD_001075 IPR020119 Pseudouridine synthase TruD, conserved site VCD_001075 IPR001656 Pseudouridine synthase, TruD VCD_001075 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_001076 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase VCD_001076 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site VCD_001076 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily VCD_001077 IPR029044 Nucleotide-diphospho-sugar transferases VCD_001077 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site VCD_001077 IPR034683 Cytidylyltransferase IspD/TarI VCD_001077 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VCD_001078 IPR007060 Septum formation initiator FtsL/DivIC VCD_001078 IPR023081 Cell division protein FtsB VCD_001079 IPR003824 Undecaprenyl-diphosphatase UppP VCD_001080 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily VCD_001080 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VCD_001081 IPR006157 Dihydroneopterin aldolase/epimerase domain VCD_001081 IPR006156 Dihydroneopterin aldolase VCD_001082 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY VCD_001083 IPR029058 Alpha/Beta hydrolase fold VCD_001083 IPR000073 Alpha/beta hydrolase fold-1 VCD_001083 IPR000639 Epoxide hydrolase-like VCD_001083 IPR023594 Haloalkane dehalogenase, subfamily 2 VCD_001084 IPR017861 Kae1/TsaD family VCD_001084 IPR017860 Peptidase M22, conserved site VCD_001084 IPR000905 Gcp-like domain VCD_001084 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD VCD_001085 IPR001911 Ribosomal protein S21 VCD_001085 IPR038380 Ribosomal protein S21 superfamily VCD_001085 IPR018278 Ribosomal protein S21, conserved site VCD_001086 IPR042184 YqeY/Aim41, N-terminal domain VCD_001086 IPR019004 Uncharacterised protein YqeY/Aim41 VCD_001086 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 VCD_001086 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like VCD_001087 IPR002694 Zinc finger, CHC2-type VCD_001087 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VCD_001087 IPR013264 DNA primase, catalytic core, N-terminal VCD_001087 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VCD_001087 IPR006295 DNA primase, DnaG VCD_001087 IPR034151 Bacterial DnaG primase, TOPRIM domain VCD_001087 IPR019475 DNA primase, DnaB-helicase binding domain VCD_001087 IPR036977 DNA Primase, CHC2-type zinc finger VCD_001087 IPR006171 TOPRIM domain VCD_001087 IPR013173 DNA primase DnaG, DnaB-binding domain VCD_001087 IPR030846 DNA primase DnaG, bacteria VCD_001088 IPR007627 RNA polymerase sigma-70 region 2 VCD_001088 IPR007631 RNA polymerase sigma factor 70, non-essential domain VCD_001088 IPR042189 Sigma-70 factor, region 1.1 superfamily VCD_001088 IPR013325 RNA polymerase sigma factor, region 2 VCD_001088 IPR013324 RNA polymerase sigma factor, region 3/4-like VCD_001088 IPR012760 RNA polymerase sigma factor RpoD, C-terminal VCD_001088 IPR028630 RNA polymerase sigma factor RpoD VCD_001088 IPR007630 RNA polymerase sigma-70 region 4 VCD_001088 IPR007624 RNA polymerase sigma-70 region 3 VCD_001088 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001088 IPR009042 RNA polymerase sigma-70 region 1.2 VCD_001088 IPR007127 RNA polymerase sigma factor 70, region 1.1 VCD_001088 IPR000943 RNA polymerase sigma-70 VCD_001088 IPR014284 RNA polymerase sigma-70 like domain VCD_001089 IPR011010 DNA breaking-rejoining enzyme, catalytic core VCD_001089 IPR013762 Integrase-like, catalytic domain superfamily VCD_001089 IPR002104 Integrase, catalytic domain VCD_001089 IPR025166 Integrase, DNA-binding domain VCD_001089 IPR038488 Integrase, DNA-binding domain superfamily VCD_001089 IPR010998 Integrase/recombinase, N-terminal VCD_001090 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VCD_001090 IPR035919 EAL domain superfamily VCD_001090 IPR013976 Metal-dependent hydrolase HDOD VCD_001090 IPR001633 EAL domain VCD_001091 IPR003660 HAMP domain VCD_001091 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_001091 IPR029151 Periplasmic sensor-like domain superfamily VCD_001091 IPR033479 Double Cache domain 1 VCD_001091 IPR000727 Target SNARE coiled-coil homology domain VCD_001092 IPR020449 Transcription regulator HTH, AraC- type VCD_001092 IPR018060 DNA binding HTH domain, AraC-type VCD_001092 IPR018062 HTH domain AraC-type, conserved site VCD_001092 IPR009057 Homeobox-like domain superfamily VCD_001093 IPR001610 PAC motif VCD_001093 IPR000014 PAS domain VCD_001093 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_001093 IPR035965 PAS domain superfamily VCD_001093 IPR013655 PAS fold-3 VCD_001093 IPR003660 HAMP domain VCD_001093 IPR004090 Chemotaxis methyl-accepting receptor VCD_001095 IPR020891 Uncharacterised protein family UPF0758, conserved site VCD_001095 IPR037518 MPN domain VCD_001095 IPR025657 RadC-like JAB domain VCD_001095 IPR001405 Uncharacterised protein family UPF0758 VCD_001102 IPR016047 Peptidase M23 VCD_001102 IPR013731 Opacity-associated protein A, N-terminal VCD_001102 IPR011055 Duplicated hybrid motif VCD_001102 IPR018392 LysM domain VCD_001103 IPR025668 Transposase DDE domain VCD_001104 IPR025668 Transposase DDE domain VCD_001109 IPR002156 Ribonuclease H domain VCD_001109 IPR012337 Ribonuclease H-like superfamily VCD_001109 IPR036397 Ribonuclease H superfamily VCD_001109 IPR022892 Ribonuclease HI VCD_001118 IPR026289 Solute binding protein, TakP-like VCD_001118 IPR041722 Alpha-keto acid binding periplasmic protein VCD_001118 IPR018389 TRAP transporter solute receptor DctP/TeaA VCD_001118 IPR038404 TRAP transporter solute receptor DctP superfamily VCD_001119 IPR017932 Glutamine amidotransferase type 2 domain VCD_001119 IPR035466 GlmS/AgaS, SIS domain 1 VCD_001119 IPR035490 GlmS/FrlB, SIS domain 2 VCD_001119 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_001119 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising VCD_001119 IPR001347 Sugar isomerase (SIS) VCD_001120 IPR036390 Winged helix DNA-binding domain superfamily VCD_001120 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VCD_001120 IPR037171 NagB/RpiA transferase-like VCD_001120 IPR001034 DeoR-type HTH domain VCD_001120 IPR014036 DeoR C-terminal sensor domain VCD_001120 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001121 IPR040442 Pyruvate kinase-like domain superfamily VCD_001121 IPR036918 Pyruvate kinase, C-terminal domain superfamily VCD_001121 IPR015795 Pyruvate kinase, C-terminal VCD_001121 IPR001697 Pyruvate kinase VCD_001121 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_001121 IPR011037 Pyruvate kinase-like, insert domain superfamily VCD_001121 IPR015793 Pyruvate kinase, barrel VCD_001121 IPR018209 Pyruvate kinase, active site VCD_001121 IPR015806 Pyruvate kinase, insert domain superfamily VCD_001122 IPR007497 Protein of unknown function DUF541 VCD_001123 IPR017685 HTH-type transcriptional regulator ArgP VCD_001123 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VCD_001123 IPR036390 Winged helix DNA-binding domain superfamily VCD_001123 IPR005119 LysR, substrate-binding VCD_001123 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001123 IPR000847 Transcription regulator HTH, LysR VCD_001124 IPR001123 Amino acid exporter protein, LeuE-type VCD_001124 IPR004777 L-lysine exporter/arginine exporter VCD_001124 IPR023445 Arginine exporter protein ArgO, enterobacteria VCD_001125 IPR008910 Conserved TM helix VCD_001125 IPR023408 Mechanosensitive ion channel MscS domain superfamily VCD_001125 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VCD_001125 IPR006686 Mechanosensitive ion channel MscS, conserved site VCD_001125 IPR010920 LSM domain superfamily VCD_001125 IPR011066 Mechanosensitive ion channel MscS, C-terminal VCD_001125 IPR006685 Mechanosensitive ion channel MscS VCD_001127 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype VCD_001127 IPR000771 Fructose-bisphosphate aldolase, class-II VCD_001127 IPR013785 Aldolase-type TIM barrel VCD_001128 IPR015824 Phosphoglycerate kinase, N-terminal VCD_001128 IPR015911 Phosphoglycerate kinase, conserved site VCD_001128 IPR001576 Phosphoglycerate kinase VCD_001128 IPR036043 Phosphoglycerate kinase superfamily VCD_001129 IPR036291 NAD(P)-binding domain superfamily VCD_001129 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VCD_001129 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VCD_001129 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VCD_001129 IPR006422 D-erythrose-4-phosphate dehydrogenase VCD_001130 IPR010916 TonB box, conserved site VCD_001130 IPR037066 TonB-dependent receptor, plug domain superfamily VCD_001130 IPR000531 TonB-dependent receptor-like, beta-barrel VCD_001130 IPR012910 TonB-dependent receptor, plug domain VCD_001130 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VCD_001130 IPR010917 TonB-dependent receptor, conserved site VCD_001130 IPR039426 Vitamin B12 transporter BtuB-like VCD_001131 IPR005119 LysR, substrate-binding VCD_001131 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001131 IPR000847 Transcription regulator HTH, LysR VCD_001131 IPR036390 Winged helix DNA-binding domain superfamily VCD_001133 IPR020826 Transketolase binding site VCD_001133 IPR005474 Transketolase, N-terminal VCD_001133 IPR033247 Transketolase family VCD_001133 IPR033248 Transketolase, C-terminal domain VCD_001133 IPR029061 Thiamin diphosphate-binding fold VCD_001133 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VCD_001133 IPR005475 Transketolase-like, pyrimidine-binding domain VCD_001133 IPR005478 Transketolase, bacterial-like VCD_001134 IPR022630 S-adenosylmethionine synthetase, C-terminal VCD_001134 IPR022631 S-adenosylmethionine synthetase, conserved site VCD_001134 IPR022629 S-adenosylmethionine synthetase, central domain VCD_001134 IPR022628 S-adenosylmethionine synthetase, N-terminal VCD_001134 IPR002133 S-adenosylmethionine synthetase VCD_001134 IPR022636 S-adenosylmethionine synthetase superfamily VCD_001135 IPR023483 Uncharacterised protein family SprT VCD_001135 IPR035240 SprT-like, zinc ribbon domain VCD_001135 IPR006640 SprT-like VCD_001136 IPR007346 Endonuclease I VCD_001137 IPR015947 PUA-like superfamily VCD_001137 IPR006700 Ribosomal RNA small subunit methyltransferase E VCD_001137 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCD_001137 IPR029028 Alpha/beta knot methyltransferases VCD_001138 IPR004215 Prokaryotic glutathione synthetase, N-terminal VCD_001138 IPR006284 Glutathione synthetase, prokaryotic VCD_001138 IPR013815 ATP-grasp fold, subdomain 1 VCD_001138 IPR004218 Prokaryotic glutathione synthetase, ATP-binding VCD_001138 IPR011761 ATP-grasp fold VCD_001138 IPR016185 Pre-ATP-grasp domain superfamily VCD_001139 IPR003774 Protein of unknown function UPF0301 VCD_001140 IPR005227 Putative pre-16S rRNA nuclease VCD_001140 IPR006641 YqgF/RNase H-like domain VCD_001140 IPR037027 YqgF/RNase H-like domain superfamily VCD_001140 IPR012337 Ribonuclease H-like superfamily VCD_001141 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001141 IPR002305 Aminoacyl-tRNA synthetase, class Ic VCD_001141 IPR002307 Tyrosine-tRNA ligase VCD_001141 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 VCD_001141 IPR024088 Tyrosine-tRNA ligase, bacterial-type VCD_001141 IPR002942 RNA-binding S4 domain VCD_001141 IPR036986 RNA-binding S4 domain superfamily VCD_001141 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_001145 IPR006321 Pilus retraction protein PilT VCD_001145 IPR003593 AAA+ ATPase domain VCD_001145 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001145 IPR001482 Type II/IV secretion system protein VCD_001146 IPR029066 PLP-binding barrel VCD_001146 IPR011078 Pyridoxal phosphate homeostasis protein VCD_001146 IPR001608 Alanine racemase, N-terminal VCD_001147 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_001147 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VCD_001147 IPR036291 NAD(P)-binding domain superfamily VCD_001147 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain VCD_001147 IPR000304 Pyrroline-5-carboxylate reductase VCD_001148 IPR003425 CCB3/YggT VCD_001149 IPR003746 Protein of unknown function DUF167 VCD_001149 IPR005228 Conserved hypothetical protein CHP00251 VCD_001149 IPR036591 YggU-like superfamily VCD_001151 IPR020922 dITP/XTP pyrophosphatase VCD_001151 IPR002637 Ham1-like protein VCD_001151 IPR029001 Inosine triphosphate pyrophosphatase-like VCD_001152 IPR010723 HemN, C-terminal VCD_001152 IPR004559 Heme chaperone HemW-like VCD_001152 IPR023404 Radical SAM, alpha/beta horseshoe VCD_001152 IPR006638 Elp3/MiaB/NifB VCD_001152 IPR034505 Anaerobic coproporphyrinogen-III oxidase VCD_001152 IPR007197 Radical SAM VCD_001153 IPR012338 Beta-lactamase/transpeptidase-like VCD_001153 IPR015868 Glutaminase VCD_001154 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001154 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type VCD_001155 IPR029119 MutY, C-terminal VCD_001155 IPR003265 HhH-GPD domain VCD_001155 IPR005760 A/G-specific adenine glycosylase MutY VCD_001155 IPR011257 DNA glycosylase VCD_001155 IPR004035 Endonuclease III, iron-sulphur binding site VCD_001155 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VCD_001155 IPR004036 Endonuclease III-like, conserved site-2 VCD_001155 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VCD_001155 IPR000445 Helix-hairpin-helix motif VCD_001155 IPR015797 NUDIX hydrolase-like domain superfamily VCD_001156 IPR036766 Fe(II) trafficking protein YggX superfamily VCD_001156 IPR007457 Fe(II) trafficking protein YggX VCD_001157 IPR023664 Murein transglycosylase-C VCD_001157 IPR023346 Lysozyme-like domain superfamily VCD_001157 IPR024570 Murein transglycosylase-C, N-terminal VCD_001157 IPR000189 Prokaryotic transglycosylase, active site VCD_001157 IPR008258 Transglycosylase SLT domain 1 VCD_001158 IPR003660 HAMP domain VCD_001158 IPR004090 Chemotaxis methyl-accepting receptor VCD_001158 IPR000727 Target SNARE coiled-coil homology domain VCD_001158 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_001158 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_001159 IPR007791 Co-chaperone DjlA, N-terminal VCD_001159 IPR001623 DnaJ domain VCD_001159 IPR036869 Chaperone J-domain superfamily VCD_001159 IPR029024 TerB-like VCD_001159 IPR023749 Co-chaperone DjlA VCD_001160 IPR007543 LptD, C-terminal VCD_001160 IPR020889 LPS-assembly protein LptD VCD_001160 IPR005653 Organic solvent tolerance-like, N-terminal VCD_001161 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VCD_001161 IPR015391 SurA N-terminal VCD_001161 IPR023034 Peptidyl-prolyl isomerase SurA VCD_001161 IPR027304 Trigger factor/SurA domain superfamily VCD_001162 IPR005255 PdxA family VCD_001162 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase VCD_001163 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VCD_001163 IPR023165 rRNA adenine dimethylase-like VCD_001163 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site VCD_001163 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal VCD_001163 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001163 IPR011530 Ribosomal RNA adenine dimethylase VCD_001164 IPR036767 ApaG domain superfamily VCD_001164 IPR007474 ApaG domain VCD_001164 IPR023065 Uncharacterised protein family ApaG VCD_001165 IPR029052 Metallo-dependent phosphatase-like VCD_001165 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VCD_001165 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) VCD_001166 IPR024072 Dihydrofolate reductase-like domain superfamily VCD_001166 IPR001796 Dihydrofolate reductase domain VCD_001166 IPR017925 Dihydrofolate reductase conserved site VCD_001166 IPR012259 Dihydrofolate reductase VCD_001167 IPR020914 Uncharacterised protein family UPF0442 VCD_001167 IPR024528 Threonine/Serine exporter, ThrE VCD_001168 IPR010619 Putative threonine/serine exporter VCD_001169 IPR014100 GTP-binding protein Obg/CgtA VCD_001169 IPR006169 GTP1/OBG domain VCD_001169 IPR006074 GTP1/OBG, conserved site VCD_001169 IPR035101 GTP-binding protein, Obg-type VCD_001169 IPR031167 OBG-type guanine nucleotide-binding (G) domain VCD_001169 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001169 IPR006073 GTP binding domain VCD_001169 IPR036726 GTP1/OBG domain superfamily VCD_001170 IPR001684 Ribosomal protein L27 VCD_001170 IPR018261 Ribosomal protein L27, conserved site VCD_001171 IPR028909 Ribosomal protein L21-like VCD_001171 IPR036164 L21-like superfamily VCD_001171 IPR001787 Ribosomal protein L21 VCD_001171 IPR018258 Ribosomal protein L21, conserved site VCD_001172 IPR008949 Isoprenoid synthase domain superfamily VCD_001172 IPR033749 Polyprenyl synthetase, conserved site VCD_001172 IPR000092 Polyprenyl synthetase VCD_001175 IPR036291 NAD(P)-binding domain superfamily VCD_001175 IPR023958 Malate dehydrogenase, type 1, bacterial VCD_001175 IPR001252 Malate dehydrogenase, active site VCD_001175 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VCD_001175 IPR022383 Lactate/malate dehydrogenase, C-terminal VCD_001175 IPR001557 L-lactate/malate dehydrogenase VCD_001175 IPR010097 Malate dehydrogenase, type 1 VCD_001175 IPR001236 Lactate/malate dehydrogenase, N-terminal VCD_001176 IPR001669 Arginine repressor VCD_001176 IPR036390 Winged helix DNA-binding domain superfamily VCD_001176 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001176 IPR020900 Arginine repressor, DNA-binding domain VCD_001176 IPR036251 Arginine repressor, C-terminal domain superfamily VCD_001176 IPR020899 Arginine repressor, C-terminal VCD_001177 IPR011852 TRAP transporter solute receptor, TAXI family VCD_001179 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001179 IPR006015 Universal stress protein A family VCD_001179 IPR006016 UspA VCD_001185 IPR012893 HipA-like, C-terminal VCD_001185 IPR017508 HipA, N-terminal subdomain 1 VCD_001188 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001188 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VCD_001188 IPR003356 DNA methylase, adenine-specific VCD_001190 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_001190 IPR021810 Protein of unknown function DUF3387 VCD_001190 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001190 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VCD_001190 IPR040980 SWI2/SNF2 ATPase VCD_001190 IPR004473 Restriction endonuclease, type I, HsdR VCD_001198 IPR009671 Regulator of ribonuclease activity B domain VCD_001198 IPR036701 RraB-like superfamily VCD_001198 IPR016716 Regulator of ribonuclease activity B VCD_001199 IPR003876 Arginine deiminase VCD_001200 IPR025502 TldD VCD_001200 IPR035068 Metalloprotease TldD/PmbA, N-terminal VCD_001200 IPR036059 Metalloprotease TldD/PmbA superfamily VCD_001200 IPR002510 Metalloprotease TldD/PmbA VCD_001201 IPR036526 Carbon-nitrogen hydrolase superfamily VCD_001201 IPR003010 Carbon-nitrogen hydrolase VCD_001201 IPR001110 Uncharacterised protein family UPF0012, conserved site VCD_001202 IPR032712 AsmA-like, C-terminal VCD_001202 IPR011836 Conserved hypothetical protein CHP02099 VCD_001202 IPR025263 Domain of unknown function DUF3971 VCD_001203 IPR022967 RNA-binding domain, S1 VCD_001203 IPR012340 Nucleic acid-binding, OB-fold VCD_001203 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VCD_001203 IPR004659 Ribonuclease E/G VCD_001203 IPR003029 S1 domain VCD_001204 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein VCD_001204 IPR029001 Inosine triphosphate pyrophosphatase-like VCD_001205 IPR026034 Cell shape-determining protein MreD, proteobacterial type VCD_001205 IPR007227 Cell shape-determining protein MreD VCD_001206 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 VCD_001206 IPR007221 Rod shape-determining protein MreC VCD_001206 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 VCD_001207 IPR004753 Cell shape determining protein MreB VCD_001214 IPR012902 Prokaryotic N-terminal methylation site VCD_001214 IPR001082 Fimbrial protein pilin VCD_001217 IPR042094 Type II secretion system F domain superfamily VCD_001217 IPR018076 Type II secretion system F domain VCD_001217 IPR001992 Type II secretion system conserved site VCD_001217 IPR003004 GspF/PilC family VCD_001218 IPR013369 Type II secretion system GspE VCD_001218 IPR001482 Type II/IV secretion system protein VCD_001218 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001218 IPR003593 AAA+ ATPase domain VCD_001218 IPR037257 General secretory system II, protein E, N-terminal superfamily VCD_001218 IPR042181 Type II secretion system, protein E, N-terminal VCD_001220 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001220 IPR036366 PGBD superfamily VCD_001220 IPR002477 Peptidoglycan binding-like VCD_001220 IPR003593 AAA+ ATPase domain VCD_001220 IPR036365 PGBD-like superfamily VCD_001221 IPR001775 GspD/PilQ family VCD_001221 IPR005644 NolW-like VCD_001221 IPR021731 AMIN domain VCD_001221 IPR038591 NolW-like superfamily VCD_001221 IPR013355 Type IV pilus secretin PilQ VCD_001221 IPR004845 Type II secretion system GspD, conserved site VCD_001221 IPR011662 Secretin/TonB, short N-terminal domain VCD_001221 IPR004846 Type II/III secretion system VCD_001225 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VCD_001225 IPR001633 EAL domain VCD_001225 IPR035919 EAL domain superfamily VCD_001225 IPR029787 Nucleotide cyclase VCD_001225 IPR000160 GGDEF domain VCD_001226 IPR000424 Primosome PriB/single-strand DNA-binding VCD_001226 IPR012340 Nucleic acid-binding, OB-fold VCD_001226 IPR011344 Single-stranded DNA-binding protein VCD_001227 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001227 IPR000792 Transcription regulator LuxR, C-terminal VCD_001227 IPR016032 Signal transduction response regulator, C-terminal effector VCD_001228 IPR029044 Nucleotide-diphospho-sugar transferases VCD_001228 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type VCD_001228 IPR005835 Nucleotidyl transferase domain VCD_001229 IPR041102 UvrA, interaction domain VCD_001229 IPR041552 UvrA DNA-binding domain VCD_001229 IPR003439 ABC transporter-like VCD_001229 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001229 IPR017871 ABC transporter, conserved site VCD_001229 IPR004602 UvrABC system subunit A VCD_001231 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VCD_001231 IPR015424 Pyridoxal phosphate-dependent transferase VCD_001231 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_001231 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_001231 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VCD_001231 IPR000192 Aminotransferase class V domain VCD_001232 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain VCD_001232 IPR002912 ACT domain VCD_001232 IPR036393 Acetylglutamate kinase-like superfamily VCD_001232 IPR005260 Aspartate kinase, monofunctional class VCD_001232 IPR001341 Aspartate kinase VCD_001232 IPR018042 Aspartate kinase, conserved site VCD_001232 IPR001048 Aspartate/glutamate/uridylate kinase VCD_001233 IPR036724 Cobalamin-binding domain superfamily VCD_001233 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VCD_001233 IPR003726 Homocysteine-binding domain VCD_001233 IPR036589 Homocysteine-binding domain superfamily VCD_001233 IPR011822 Cobalamin-dependent methionine synthase VCD_001233 IPR036594 Methionine synthase domain VCD_001233 IPR000489 Pterin-binding domain VCD_001233 IPR033706 Methionine synthase, B12-binding domain VCD_001233 IPR004223 Vitamin B12-dependent methionine synthase, activation domain VCD_001233 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily VCD_001233 IPR011005 Dihydropteroate synthase-like VCD_001233 IPR006158 Cobalamin (vitamin B12)-binding domain VCD_001234 IPR038770 Sodium/solute symporter superfamily VCD_001234 IPR018422 Cation/H+ exchanger, CPA1 family VCD_001234 IPR006153 Cation/H+ exchanger VCD_001237 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001237 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase VCD_001237 IPR002500 Phosphoadenosine phosphosulphate reductase VCD_001237 IPR011800 Phosphoadenosine phosphosulphate reductase CysH VCD_001238 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site VCD_001238 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain VCD_001238 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily VCD_001238 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain VCD_001238 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit VCD_001239 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily VCD_001239 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VCD_001239 IPR017927 FAD-binding domain, ferredoxin reductase-type VCD_001239 IPR017938 Riboflavin synthase-like beta-barrel VCD_001239 IPR001094 Flavodoxin-like VCD_001239 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VCD_001239 IPR029039 Flavoprotein-like superfamily VCD_001239 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria VCD_001239 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding VCD_001239 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain VCD_001239 IPR008254 Flavodoxin/nitric oxide synthase VCD_001239 IPR001433 Oxidoreductase FAD/NAD(P)-binding VCD_001242 IPR014318 Phage shock protein, PspG VCD_001244 IPR013785 Aldolase-type TIM barrel VCD_001244 IPR018517 tRNA-dihydrouridine synthase, conserved site VCD_001244 IPR001269 tRNA-dihydrouridine synthase VCD_001244 IPR004653 tRNA-dihydrouridine(20/20a) synthase VCD_001244 IPR035587 DUS-like, FMN-binding domain VCD_001246 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001246 IPR036390 Winged helix DNA-binding domain superfamily VCD_001246 IPR002481 Ferric-uptake regulator VCD_001248 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VCD_001248 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D VCD_001248 IPR001279 Metallo-beta-lactamase VCD_001250 IPR035476 Phosphoglucose isomerase, SIS domain 1 VCD_001250 IPR023096 Phosphoglucose isomerase, C-terminal VCD_001250 IPR001672 Phosphoglucose isomerase (PGI) VCD_001250 IPR018189 Phosphoglucose isomerase, conserved site VCD_001250 IPR035482 Phosphoglucose isomerase, SIS domain 2 VCD_001251 IPR001602 Uncharacterised protein family UPF0047 VCD_001251 IPR035917 YjbQ-like superfamily VCD_001252 IPR000821 Alanine racemase VCD_001252 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VCD_001252 IPR011079 Alanine racemase, C-terminal VCD_001252 IPR001608 Alanine racemase, N-terminal VCD_001252 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VCD_001252 IPR029066 PLP-binding barrel VCD_001253 IPR007693 DNA helicase, DnaB-like, N-terminal VCD_001253 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VCD_001253 IPR007692 DNA helicase, DnaB type VCD_001253 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily VCD_001253 IPR003593 AAA+ ATPase domain VCD_001253 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001253 IPR007694 DNA helicase, DnaB-like, C-terminal VCD_001255 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VCD_001255 IPR020594 Ribosomal protein L9, bacteria/chloroplast VCD_001255 IPR020070 Ribosomal protein L9, N-terminal VCD_001255 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VCD_001255 IPR036935 Ribosomal protein L9, N-terminal domain superfamily VCD_001255 IPR000244 Ribosomal protein L9 VCD_001255 IPR020069 Ribosomal protein L9, C-terminal VCD_001256 IPR036870 Ribosomal protein S18 superfamily VCD_001256 IPR001648 Ribosomal protein S18 VCD_001256 IPR018275 Ribosomal protein S18, conserved site VCD_001257 IPR012340 Nucleic acid-binding, OB-fold VCD_001257 IPR000424 Primosome PriB/single-strand DNA-binding VCD_001257 IPR023646 Primosomal replication protein PriB VCD_001258 IPR020814 Ribosomal protein S6, plastid/chloroplast VCD_001258 IPR000529 Ribosomal protein S6 VCD_001258 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VCD_001258 IPR035980 Ribosomal protein S6 superfamily VCD_001258 IPR020815 Ribosomal protein S6, conserved site VCD_001259 IPR009040 Ferritin-like diiron domain VCD_001259 IPR009078 Ferritin-like superfamily VCD_001259 IPR002024 Bacterioferritin VCD_001259 IPR012347 Ferritin-like VCD_001259 IPR008331 Ferritin/DPS protein domain VCD_001260 IPR007419 BFD-like [2Fe-2S]-binding domain VCD_001260 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily VCD_001261 IPR033720 Elongation factor Tu, domain 2 VCD_001261 IPR004161 Translation elongation factor EFTu-like, domain 2 VCD_001261 IPR000795 Transcription factor, GTP-binding domain VCD_001261 IPR031157 Tr-type G domain, conserved site VCD_001261 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain VCD_001261 IPR005225 Small GTP-binding protein domain VCD_001261 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VCD_001261 IPR009000 Translation protein, beta-barrel domain superfamily VCD_001261 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001261 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VCD_001261 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VCD_001262 IPR004540 Translation elongation factor EFG/EF2 VCD_001262 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001262 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001262 IPR031157 Tr-type G domain, conserved site VCD_001262 IPR004161 Translation elongation factor EFTu-like, domain 2 VCD_001262 IPR000640 Elongation factor EFG, domain V-like VCD_001262 IPR035649 EFG, domain V VCD_001262 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001262 IPR005225 Small GTP-binding protein domain VCD_001262 IPR000795 Transcription factor, GTP-binding domain VCD_001262 IPR009000 Translation protein, beta-barrel domain superfamily VCD_001262 IPR035647 EF-G domain III/V-like VCD_001262 IPR009022 Elongation factor G, domain III VCD_001262 IPR041095 Elongation Factor G, domain II VCD_001262 IPR005517 Translation elongation factor EFG/EF2, domain IV VCD_001263 IPR005717 Ribosomal protein S7, bacterial/organellar-type VCD_001263 IPR020606 Ribosomal protein S7, conserved site VCD_001263 IPR023798 Ribosomal protein S7 domain VCD_001263 IPR036823 Ribosomal protein S7 domain superfamily VCD_001263 IPR000235 Ribosomal protein S5/S7 VCD_001264 IPR012340 Nucleic acid-binding, OB-fold VCD_001264 IPR006032 Ribosomal protein S12/S23 VCD_001264 IPR005679 Ribosomal protein S12, bacterial-type VCD_001266 IPR027396 DsrEFH-like VCD_001266 IPR003787 Sulphur relay, DsrE/F-like protein VCD_001266 IPR017462 Sulphur relay, TusC/DsrF VCD_001267 IPR027396 DsrEFH-like VCD_001267 IPR017463 Sulphur relay, TusD/DsrE VCD_001267 IPR003787 Sulphur relay, DsrE/F-like protein VCD_001268 IPR039445 Transcriptional regulator DauR-like, HTH domain VCD_001268 IPR039446 Transcriptional regulator DauR-like VCD_001268 IPR013559 YheO-like VCD_001269 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VCD_001269 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VCD_001269 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VCD_001271 IPR007236 SlyX VCD_001272 IPR019201 Protein of unknown function DUF2065 VCD_001273 IPR036013 Band 7/SPFH domain superfamily VCD_001273 IPR010200 HflC VCD_001273 IPR001107 Band 7 domain VCD_001274 IPR020980 Menbrane protein HflK, N-terminal VCD_001274 IPR001107 Band 7 domain VCD_001274 IPR036013 Band 7/SPFH domain superfamily VCD_001274 IPR001972 Stomatin family VCD_001274 IPR010201 HflK VCD_001275 IPR030394 HflX-type guanine nucleotide-binding (G) domain VCD_001275 IPR035647 EF-G domain III/V-like VCD_001275 IPR016496 GTPase HflX VCD_001275 IPR006073 GTP binding domain VCD_001275 IPR042108 GTPase HflX, N-terminal domain superfamily VCD_001275 IPR025121 GTPase HflX, N-terminal VCD_001275 IPR032305 GTP-binding protein, middle domain VCD_001275 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001276 IPR005001 RNA-binding protein Hfq VCD_001276 IPR010920 LSM domain superfamily VCD_001277 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001277 IPR039657 Dimethylallyltransferase VCD_001277 IPR018022 IPP transferase VCD_001278 IPR002099 DNA mismatch repair protein family, N-terminal VCD_001278 IPR020667 DNA mismatch repair protein, MutL VCD_001278 IPR014762 DNA mismatch repair, conserved site VCD_001278 IPR013507 DNA mismatch repair protein, S5 domain 2-like VCD_001278 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001278 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms VCD_001278 IPR014790 MutL, C-terminal, dimerisation VCD_001278 IPR042120 MutL, C-terminal domain, dimerisation subdomain VCD_001278 IPR042121 MutL, C-terminal domain, regulatory subdomain VCD_001278 IPR037198 MutL, C-terminal domain superfamily VCD_001278 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001278 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001279 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain VCD_001280 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE VCD_001280 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001281 IPR013542 Domain of unknown function DUF1730 VCD_001281 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_001281 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_001281 IPR004453 Epoxyqueuosine reductase QueG VCD_001282 IPR013520 Exonuclease, RNase T/DNA polymerase III VCD_001282 IPR022894 Oligoribonuclease VCD_001282 IPR012337 Ribonuclease H-like superfamily VCD_001282 IPR036397 Ribonuclease H superfamily VCD_001283 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VCD_001283 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001283 IPR004881 Ribosome biogenesis GTPase RsgA VCD_001283 IPR010914 RsgA GTPase domain VCD_001284 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001284 IPR010914 RsgA GTPase domain VCD_001284 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VCD_001284 IPR004881 Ribosome biogenesis GTPase RsgA VCD_001285 IPR003817 Phosphatidylserine decarboxylase-related VCD_001285 IPR033177 Phosphatidylserine decarboxylase VCD_001285 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 VCD_001286 IPR004680 Citrate transporter-like domain VCD_001286 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VCD_001286 IPR006037 Regulator of K+ conductance, C-terminal VCD_001286 IPR031312 Sodium/sulphate symporter, conserved site VCD_001288 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily VCD_001288 IPR006124 Metalloenzyme VCD_001288 IPR011258 BPG-independent PGAM, N-terminal VCD_001288 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent VCD_001288 IPR017850 Alkaline-phosphatase-like, core domain superfamily VCD_001289 IPR016047 Peptidase M23 VCD_001289 IPR011055 Duplicated hybrid motif VCD_001291 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VCD_001291 IPR013571 Transcription regulator QacR, C-terminal VCD_001291 IPR009057 Homeobox-like domain superfamily VCD_001291 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VCD_001291 IPR001647 DNA-binding HTH domain, TetR-type VCD_001292 IPR000257 Uroporphyrinogen decarboxylase (URO-D) VCD_001292 IPR006361 Uroporphyrinogen decarboxylase HemE VCD_001292 IPR038071 UROD/MetE-like superfamily VCD_001293 IPR020084 NUDIX hydrolase, conserved site VCD_001293 IPR000086 NUDIX hydrolase domain VCD_001293 IPR015376 Zinc ribbon, NADH pyrophosphatase VCD_001293 IPR022925 NADH pyrophosphatase NudC VCD_001293 IPR015797 NUDIX hydrolase-like domain superfamily VCD_001294 IPR038309 Rsd/AlgQ superfamily VCD_001294 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd VCD_001294 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VCD_001295 IPR007080 RNA polymerase Rpb1, domain 1 VCD_001295 IPR006592 RNA polymerase, N-terminal VCD_001295 IPR007066 RNA polymerase Rpb1, domain 3 VCD_001295 IPR042102 RNA polymerase Rpb1, domain 3 superfamily VCD_001295 IPR007083 RNA polymerase Rpb1, domain 4 VCD_001295 IPR007081 RNA polymerase Rpb1, domain 5 VCD_001295 IPR038120 RNA polymerase Rpb1, funnel domain superfamily VCD_001295 IPR012754 DNA-directed RNA polymerase, subunit beta-prime VCD_001295 IPR000722 RNA polymerase, alpha subunit VCD_001296 IPR015712 DNA-directed RNA polymerase, subunit 2 VCD_001296 IPR007642 RNA polymerase Rpb2, domain 2 VCD_001296 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily VCD_001296 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain VCD_001296 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain VCD_001296 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily VCD_001296 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type VCD_001296 IPR007121 RNA polymerase, beta subunit, conserved site VCD_001296 IPR007644 RNA polymerase, beta subunit, protrusion VCD_001296 IPR014724 RNA polymerase Rpb2, OB-fold VCD_001296 IPR037034 RNA polymerase Rpb2, domain 2 superfamily VCD_001296 IPR007645 RNA polymerase Rpb2, domain 3 VCD_001296 IPR007641 RNA polymerase Rpb2, domain 7 VCD_001297 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily VCD_001297 IPR013823 Ribosomal protein L7/L12, C-terminal VCD_001297 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VCD_001297 IPR008932 Ribosomal protein L7/L12, oligomerisation VCD_001297 IPR000206 Ribosomal protein L7/L12 VCD_001298 IPR001790 Ribosomal protein L10P VCD_001298 IPR002363 Ribosomal protein L10, eubacterial, conserved site VCD_001298 IPR022973 Ribosomal protein L10 VCD_001299 IPR023674 Ribosomal protein L1-like VCD_001299 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VCD_001299 IPR002143 Ribosomal protein L1 VCD_001299 IPR005878 Ribosomal protein L1, bacterial-type VCD_001299 IPR023673 Ribosomal protein L1, conserved site VCD_001299 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VCD_001300 IPR000911 Ribosomal protein L11/L12 VCD_001300 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VCD_001300 IPR020783 Ribosomal protein L11, C-terminal VCD_001300 IPR006519 Ribosomal protein L11, bacterial-type VCD_001300 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VCD_001300 IPR020785 Ribosomal protein L11, conserved site VCD_001300 IPR020784 Ribosomal protein L11, N-terminal VCD_001301 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VCD_001301 IPR008991 Translation protein SH3-like domain superfamily VCD_001301 IPR005824 KOW VCD_001301 IPR006645 NusG, N-terminal VCD_001301 IPR036735 NusG, N-terminal domain superfamily VCD_001301 IPR014722 Ribosomal protein L2, domain 2 VCD_001301 IPR001062 Transcription antitermination protein, NusG VCD_001302 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit VCD_001302 IPR038379 SecE superfamily VCD_001302 IPR005807 SecE subunit of protein translocation complex, bacterial-like VCD_001303 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain VCD_001303 IPR004161 Translation elongation factor EFTu-like, domain 2 VCD_001303 IPR033720 Elongation factor Tu, domain 2 VCD_001303 IPR031157 Tr-type G domain, conserved site VCD_001303 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001303 IPR005225 Small GTP-binding protein domain VCD_001303 IPR000795 Transcription factor, GTP-binding domain VCD_001303 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VCD_001303 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VCD_001303 IPR009000 Translation protein, beta-barrel domain superfamily VCD_001303 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VCD_001304 IPR006083 Phosphoribulokinase/uridine kinase VCD_001304 IPR004566 Pantothenate kinase VCD_001304 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001305 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001305 IPR003142 Biotin protein ligase, C-terminal VCD_001305 IPR004409 Biotin operon repressor, helix-turn-helix domain VCD_001305 IPR004408 Biotin--acetyl-CoA-carboxylase ligase VCD_001305 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain VCD_001305 IPR013196 Helix-turn-helix, type 11 VCD_001305 IPR036390 Winged helix DNA-binding domain superfamily VCD_001305 IPR008988 Transcriptional repressor, C-terminal VCD_001305 IPR030855 Bifunctional ligase/repressor BirA VCD_001306 IPR006094 FAD linked oxidase, N-terminal VCD_001306 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily VCD_001306 IPR036318 FAD-binding, type PCMH-like superfamily VCD_001306 IPR016166 FAD-binding domain, PCMH-type VCD_001306 IPR016167 FAD-binding, type PCMH, subdomain 1 VCD_001306 IPR016169 FAD-binding, type PCMH, subdomain 2 VCD_001306 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal VCD_001306 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase VCD_001308 IPR001736 Phospholipase D/Transphosphatidylase VCD_001308 IPR025202 Phospholipase D-like domain VCD_001308 IPR016270 CDP-alcohol phosphatidyltransferase class-II family VCD_001310 IPR017927 FAD-binding domain, ferredoxin reductase-type VCD_001310 IPR001433 Oxidoreductase FAD/NAD(P)-binding VCD_001310 IPR017938 Riboflavin synthase-like beta-barrel VCD_001310 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VCD_001311 IPR017927 FAD-binding domain, ferredoxin reductase-type VCD_001311 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VCD_001311 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VCD_001311 IPR036010 2Fe-2S ferredoxin-like superfamily VCD_001311 IPR012675 Beta-grasp domain superfamily VCD_001311 IPR017938 Riboflavin synthase-like beta-barrel VCD_001311 IPR001433 Oxidoreductase FAD/NAD(P)-binding VCD_001311 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VCD_001311 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VCD_001311 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VCD_001312 IPR002830 UbiD decarboxylyase family VCD_001314 IPR012340 Nucleic acid-binding, OB-fold VCD_001314 IPR003593 AAA+ ATPase domain VCD_001314 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VCD_001314 IPR011129 Cold shock domain VCD_001314 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001314 IPR041703 Transcription termination factor Rho, ATP binding domain VCD_001314 IPR011112 Rho termination factor, N-terminal VCD_001314 IPR036269 Rho termination factor, N-terminal domain superfamily VCD_001314 IPR011113 Rho termination factor, RNA-binding domain VCD_001314 IPR004665 Transcription termination factor Rho VCD_001315 IPR013766 Thioredoxin domain VCD_001315 IPR017937 Thioredoxin, conserved site VCD_001315 IPR036249 Thioredoxin-like superfamily VCD_001315 IPR005746 Thioredoxin VCD_001316 IPR023554 ATP-dependent RNA helicase RhlB type VCD_001316 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_001316 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001316 IPR001650 Helicase, C-terminal VCD_001316 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_001316 IPR011545 DEAD/DEAH box helicase domain VCD_001316 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_001317 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase VCD_001317 IPR030673 Pyrophosphatase, GppA/Ppx-type VCD_001317 IPR003695 Ppx/GppA phosphatase VCD_001318 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_001318 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_001318 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_001318 IPR030856 Sensor histidine kinase RcsC VCD_001318 IPR038388 RcsC, C-terminal domain superfamily VCD_001318 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001318 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal VCD_001318 IPR001789 Signal transduction response regulator, receiver domain VCD_001318 IPR005467 Histidine kinase domain VCD_001318 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001318 IPR011006 CheY-like superfamily VCD_001319 IPR026032 Probable 3-phenylpropionic acid transporter VCD_001319 IPR024989 Major facilitator superfamily associated domain VCD_001319 IPR036259 MFS transporter superfamily VCD_001322 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain VCD_001322 IPR000873 AMP-dependent synthetase/ligase VCD_001322 IPR042099 AMP-dependent synthetase-like superfamily VCD_001322 IPR011904 Acetate-CoA ligase VCD_001322 IPR025110 AMP-binding enzyme, C-terminal domain VCD_001322 IPR020845 AMP-binding, conserved site VCD_001323 IPR036441 Dehydroquinase, class II superfamily VCD_001323 IPR018509 Dehydroquinase, class II, conserved site VCD_001323 IPR001874 Dehydroquinase, class II VCD_001324 IPR000089 Biotin/lipoyl attachment VCD_001324 IPR001249 Acetyl-CoA biotin carboxyl carrier VCD_001324 IPR001882 Biotin-binding site VCD_001324 IPR011053 Single hybrid motif VCD_001325 IPR016185 Pre-ATP-grasp domain superfamily VCD_001325 IPR005482 Biotin carboxylase, C-terminal VCD_001325 IPR011764 Biotin carboxylation domain VCD_001325 IPR005481 Biotin carboxylase-like, N-terminal domain VCD_001325 IPR013815 ATP-grasp fold, subdomain 1 VCD_001325 IPR011761 ATP-grasp fold VCD_001325 IPR011054 Rudiment single hybrid motif VCD_001325 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VCD_001325 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase VCD_001327 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001327 IPR004498 Ribosomal protein L11 methyltransferase VCD_001329 IPR013785 Aldolase-type TIM barrel VCD_001329 IPR035587 DUS-like, FMN-binding domain VCD_001329 IPR032887 tRNA-dihydrouridine synthase B VCD_001329 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal VCD_001329 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 VCD_001329 IPR001269 tRNA-dihydrouridine synthase VCD_001329 IPR018517 tRNA-dihydrouridine synthase, conserved site VCD_001330 IPR002197 DNA binding HTH domain, Fis-type VCD_001330 IPR005412 DNA-binding protein Fis VCD_001330 IPR009057 Homeobox-like domain superfamily VCD_001331 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_001331 IPR001761 Periplasmic binding protein/LacI sugar binding domain VCD_001331 IPR028082 Periplasmic binding protein-like I VCD_001331 IPR000843 LacI-type HTH domain VCD_001332 IPR004786 6-phosphogluconate dehydratase VCD_001332 IPR042096 Dihydroxy-acid dehydratase, C-terminal VCD_001332 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VCD_001332 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VCD_001332 IPR037237 IlvD/EDD, N-terminal domain VCD_001333 IPR006001 Carbohydrate kinase, thermoresistant glucokinase VCD_001333 IPR031322 Shikimate kinase/gluconokinase VCD_001333 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001334 IPR003474 Gluconate transporter VCD_001335 IPR031337 KDPG/KHG aldolase, active site 1 VCD_001335 IPR013785 Aldolase-type TIM barrel VCD_001335 IPR000887 KDPG/KHG aldolase VCD_001335 IPR031338 KDPG/KHG aldolase, active site 2 VCD_001339 IPR004090 Chemotaxis methyl-accepting receptor VCD_001339 IPR003660 HAMP domain VCD_001339 IPR033480 Single Cache domain 2 VCD_001339 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_001340 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily VCD_001340 IPR011193 Ornithine/lysine/arginine decarboxylase VCD_001340 IPR015424 Pyridoxal phosphate-dependent transferase VCD_001340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_001340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_001340 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VCD_001340 IPR000310 Orn/Lys/Arg decarboxylase, major domain VCD_001340 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VCD_001341 IPR004754 Amino acid antiporter VCD_001341 IPR002293 Amino acid/polyamine transporter I VCD_001342 IPR039420 Transcriptional regulatory protein WalR-like VCD_001342 IPR040970 CadC C-terminal domain 1 VCD_001342 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_001342 IPR016032 Signal transduction response regulator, C-terminal effector VCD_001342 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_001342 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001343 IPR011788 Zn(II)-responsive transcriptional regulator VCD_001343 IPR000551 MerR-type HTH domain VCD_001343 IPR009061 Putative DNA-binding domain superfamily VCD_001345 IPR011607 Methylglyoxal synthase-like domain VCD_001345 IPR016193 Cytidine deaminase-like VCD_001345 IPR036914 Methylglyoxal synthase-like domain superfamily VCD_001345 IPR002695 Bifunctional purine biosynthesis protein PurH-like VCD_001345 IPR024051 AICAR transformylase, duplicated domain superfamily VCD_001346 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal VCD_001346 IPR020559 Phosphoribosylglycinamide synthetase, conserved site VCD_001346 IPR020560 Phosphoribosylglycinamide synthetase, C-domain VCD_001346 IPR000115 Phosphoribosylglycinamide synthetase VCD_001346 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VCD_001346 IPR016185 Pre-ATP-grasp domain superfamily VCD_001346 IPR013815 ATP-grasp fold, subdomain 1 VCD_001346 IPR011761 ATP-grasp fold VCD_001346 IPR011054 Rudiment single hybrid motif VCD_001346 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily VCD_001348 IPR000119 Histone-like DNA-binding protein VCD_001348 IPR020816 Histone-like DNA-binding protein, conserved site VCD_001348 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VCD_001350 IPR002550 CNNM, transmembrane domain VCD_001350 IPR000644 CBS domain VCD_001351 IPR000600 ROK family VCD_001352 IPR018050 Phosphomannose isomerase, type I, conserved site VCD_001352 IPR016305 Mannose-6-phosphate isomerase VCD_001352 IPR001250 Mannose-6-phosphate isomerase, type I VCD_001352 IPR011051 RmlC-like cupin domain superfamily VCD_001352 IPR014710 RmlC-like jelly roll fold VCD_001353 IPR023381 YP001051499.1-like domain superfamily VCD_001353 IPR007338 Protein of unknown function DUF416 VCD_001354 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VCD_001354 IPR023514 Glyoxylate/hydroxypyruvate reductase A VCD_001354 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCD_001354 IPR036291 NAD(P)-binding domain superfamily VCD_001355 IPR005122 Uracil-DNA glycosylase-like VCD_001355 IPR036895 Uracil-DNA glycosylase-like domain superfamily VCD_001356 IPR030192 Miniconductance mechanosensitive channel YbdG VCD_001356 IPR011066 Mechanosensitive ion channel MscS, C-terminal VCD_001356 IPR006685 Mechanosensitive ion channel MscS VCD_001356 IPR010920 LSM domain superfamily VCD_001357 IPR022712 Beta-Casp domain VCD_001357 IPR001279 Metallo-beta-lactamase VCD_001357 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VCD_001357 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VCD_001359 IPR003362 Bacterial sugar transferase VCD_001360 IPR036291 NAD(P)-binding domain superfamily VCD_001360 IPR001509 NAD-dependent epimerase/dehydratase VCD_001361 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001361 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VCD_001361 IPR036291 NAD(P)-binding domain superfamily VCD_001367 IPR016161 Aldehyde/histidinol dehydrogenase VCD_001367 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_001367 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_001367 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VCD_001367 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VCD_001367 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain VCD_001367 IPR015590 Aldehyde dehydrogenase domain VCD_001367 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase VCD_001367 IPR039697 Iron-type alcohol dehydrogenase-like VCD_001368 IPR010192 2-succinylbenzoate--CoA ligase VCD_001368 IPR000873 AMP-dependent synthetase/ligase VCD_001368 IPR042099 AMP-dependent synthetase-like superfamily VCD_001368 IPR020845 AMP-binding, conserved site VCD_001368 IPR025110 AMP-binding enzyme, C-terminal domain VCD_001370 IPR029439 Wzt, C-terminal VCD_001370 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001370 IPR003439 ABC transporter-like VCD_001370 IPR003593 AAA+ ATPase domain VCD_001373 IPR015424 Pyridoxal phosphate-dependent transferase VCD_001373 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_001373 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_001373 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VCD_001374 IPR006368 GDP-mannose 4,6-dehydratase VCD_001374 IPR016040 NAD(P)-binding domain VCD_001374 IPR036291 NAD(P)-binding domain superfamily VCD_001375 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VCD_001375 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VCD_001375 IPR005843 Alpha-D-phosphohexomutase, C-terminal VCD_001375 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VCD_001375 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VCD_001375 IPR016066 Alpha-D-phosphohexomutase, conserved site VCD_001375 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VCD_001375 IPR005841 Alpha-D-phosphohexomutase superfamily VCD_001376 IPR029044 Nucleotide-diphospho-sugar transferases VCD_001376 IPR005835 Nucleotidyl transferase domain VCD_001376 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase VCD_001376 IPR014710 RmlC-like jelly roll fold VCD_001376 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal VCD_001376 IPR011051 RmlC-like cupin domain superfamily VCD_001377 IPR036291 NAD(P)-binding domain superfamily VCD_001377 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase VCD_001377 IPR001509 NAD-dependent epimerase/dehydratase VCD_001378 IPR002509 NodB homology domain VCD_001378 IPR033119 Glycoside hydrolase family 11, active site 2 VCD_001378 IPR018208 Glycoside hydrolase family 11, active site 1 VCD_001378 IPR013319 Glycoside hydrolase family 11/12 VCD_001378 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VCD_001378 IPR012291 CBM2, carbohydrate-binding domain superfamily VCD_001378 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily VCD_001378 IPR001919 Carbohydrate-binding type-2 domain VCD_001378 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VCD_001378 IPR001137 Glycoside hydrolase family 11 VCD_001378 IPR006311 Twin-arginine translocation pathway, signal sequence VCD_001378 IPR033123 Glycosyl hydrolases family 11 (GH11) domain VCD_001381 IPR002201 Glycosyl transferase, family 9 VCD_001381 IPR011910 ADP-heptose--LPS heptosyltransferase 2 VCD_001383 IPR007577 Glycosyltransferase, DXD sugar-binding motif VCD_001383 IPR029044 Nucleotide-diphospho-sugar transferases VCD_001384 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily VCD_001384 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal VCD_001384 IPR039901 3-deoxy-D-manno-octulosonic acid transferase VCD_001390 IPR022826 3-deoxy-D-manno-octulosonic acid kinase VCD_001390 IPR011009 Protein kinase-like domain superfamily VCD_001390 IPR000719 Protein kinase domain VCD_001391 IPR002201 Glycosyl transferase, family 9 VCD_001392 IPR029044 Nucleotide-diphospho-sugar transferases VCD_001392 IPR001173 Glycosyltransferase 2-like VCD_001393 IPR002201 Glycosyl transferase, family 9 VCD_001394 IPR004821 Cytidyltransferase-like domain VCD_001394 IPR001980 Phosphopantetheine adenylyltransferase VCD_001394 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001395 IPR020629 Formamidopyrimidine-DNA glycosylase VCD_001395 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain VCD_001395 IPR035937 MutM-like, N-terminal VCD_001395 IPR010979 Ribosomal protein S13-like, H2TH VCD_001395 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type VCD_001395 IPR010663 Zinc finger, FPG/IleRS-type VCD_001395 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site VCD_001395 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding VCD_001397 IPR038584 Ribosomal protein L33 superfamily VCD_001397 IPR018264 Ribosomal protein L33, conserved site VCD_001397 IPR011332 Zinc-binding ribosomal protein VCD_001397 IPR001705 Ribosomal protein L33 VCD_001398 IPR037147 Ribosomal protein L28/L24 superfamily VCD_001398 IPR001383 Ribosomal protein L28 VCD_001398 IPR034704 L28p-like VCD_001398 IPR026569 Ribosomal protein L28/L24 VCD_001399 IPR010994 RuvA domain 2-like VCD_001399 IPR025657 RadC-like JAB domain VCD_001399 IPR037518 MPN domain VCD_001399 IPR020891 Uncharacterised protein family UPF0758, conserved site VCD_001399 IPR001405 Uncharacterised protein family UPF0758 VCD_001400 IPR003660 HAMP domain VCD_001400 IPR033479 Double Cache domain 1 VCD_001400 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_001400 IPR004090 Chemotaxis methyl-accepting receptor VCD_001400 IPR029151 Periplasmic sensor-like domain superfamily VCD_001400 IPR000727 Target SNARE coiled-coil homology domain VCD_001401 IPR035929 CoaB-like superfamily VCD_001401 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal VCD_001401 IPR036551 Flavin prenyltransferase-like VCD_001401 IPR003382 Flavoprotein VCD_001401 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC VCD_001402 IPR009057 Homeobox-like domain superfamily VCD_001402 IPR001647 DNA-binding HTH domain, TetR-type VCD_001402 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VCD_001402 IPR023769 Nucleoid occlusion factor SlmA VCD_001403 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase VCD_001403 IPR004960 Bacterial lipid A biosynthesis acyltransferase VCD_001404 IPR004960 Bacterial lipid A biosynthesis acyltransferase VCD_001404 IPR011921 Lipid A biosynthesis myristoyltransferase VCD_001405 IPR004467 Orotate phosphoribosyl transferase domain VCD_001405 IPR000836 Phosphoribosyltransferase domain VCD_001405 IPR023031 Orotate phosphoribosyltransferase VCD_001405 IPR029057 Phosphoribosyltransferase-like VCD_001406 IPR002381 Ribonuclease PH, bacterial-type VCD_001406 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001406 IPR018336 Ribonuclease PH, conserved site VCD_001406 IPR027408 PNPase/RNase PH domain superfamily VCD_001406 IPR036345 Exoribonuclease, PH domain 2 superfamily VCD_001406 IPR001247 Exoribonuclease, phosphorolytic domain 1 VCD_001406 IPR015847 Exoribonuclease, phosphorolytic domain 2 VCD_001407 IPR013527 YicC-like, N-terminal VCD_001407 IPR013551 Domain of unknown function DUF1732 VCD_001407 IPR005229 Conserved hypothetical protein CHP00255 VCD_001408 IPR005134 Uncharacterised protein family UPF0114 VCD_001408 IPR020761 Uncharacterised protein family UPF0114, bacteria VCD_001409 IPR001996 Phosphotransferase system, IIB component, type 1 VCD_001409 IPR013013 Phosphotransferase system, EIIC component, type 1 VCD_001409 IPR036878 Glucose permease domain IIB VCD_001409 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VCD_001409 IPR003352 Phosphotransferase system, EIIC VCD_001410 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VCD_001410 IPR005486 Glucokinase regulatory protein, conserved site VCD_001410 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein VCD_001410 IPR001347 Sugar isomerase (SIS) VCD_001411 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001411 IPR022821 Transcription regulator HTH, MurR VCD_001411 IPR001347 Sugar isomerase (SIS) VCD_001411 IPR000281 Helix-turn-helix protein RpiR VCD_001411 IPR009057 Homeobox-like domain superfamily VCD_001411 IPR035472 RpiR-like, SIS domain VCD_001412 IPR000522 ABC transporter, permease protein, BtuC-like VCD_001412 IPR037294 ABC transporter, BtuC-like VCD_001413 IPR002491 ABC transporter periplasmic binding domain VCD_001414 IPR003593 AAA+ ATPase domain VCD_001414 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001414 IPR003439 ABC transporter-like VCD_001414 IPR017871 ABC transporter, conserved site VCD_001415 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VCD_001415 IPR010105 TonB-dependent siderophore receptor VCD_001415 IPR010917 TonB-dependent receptor, conserved site VCD_001415 IPR037066 TonB-dependent receptor, plug domain superfamily VCD_001415 IPR012910 TonB-dependent receptor, plug domain VCD_001415 IPR010916 TonB box, conserved site VCD_001415 IPR000531 TonB-dependent receptor-like, beta-barrel VCD_001415 IPR039423 TonB-dependent receptor-like VCD_001416 IPR003439 ABC transporter-like VCD_001416 IPR003593 AAA+ ATPase domain VCD_001416 IPR039421 Type I protein exporter VCD_001416 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001416 IPR017871 ABC transporter, conserved site VCD_001416 IPR011527 ABC transporter type 1, transmembrane domain VCD_001416 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_001419 IPR002121 HRDC domain VCD_001419 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001419 IPR018982 RQC domain VCD_001419 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001419 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VCD_001419 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_001419 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial VCD_001419 IPR004589 DNA helicase, ATP-dependent, RecQ type VCD_001419 IPR011545 DEAD/DEAH box helicase domain VCD_001419 IPR010997 HRDC-like superfamily VCD_001419 IPR001650 Helicase, C-terminal VCD_001420 IPR004626 RarD protein VCD_001420 IPR000620 EamA domain VCD_001421 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_001421 IPR000101 Gamma-glutamyltranspeptidase VCD_001422 IPR020449 Transcription regulator HTH, AraC- type VCD_001422 IPR018062 HTH domain AraC-type, conserved site VCD_001422 IPR018060 DNA binding HTH domain, AraC-type VCD_001422 IPR009057 Homeobox-like domain superfamily VCD_001423 IPR001123 Amino acid exporter protein, LeuE-type VCD_001423 IPR004778 Homoserine/Threonine efflux protein VCD_001424 IPR013986 DExx box DNA helicase domain superfamily VCD_001424 IPR014017 UvrD-like DNA helicase, C-terminal VCD_001424 IPR000212 DNA helicase, UvrD/REP type VCD_001424 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001424 IPR014016 UvrD-like helicase, ATP-binding domain VCD_001424 IPR034739 UvrD/AddA helicase, N-terminal VCD_001424 IPR005753 DNA helicase, ATP-dependent, UvrD type VCD_001425 IPR001567 Peptidase M3A/M3B catalytic domain VCD_001425 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VCD_001426 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001426 IPR007473 Ribosomal RNA large subunit methyltransferase J VCD_001426 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_001427 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VCD_001427 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VCD_001427 IPR006322 Glutathione reductase, eukaryote/bacterial VCD_001427 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCD_001427 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VCD_001427 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001427 IPR023753 FAD/NAD(P)-binding domain VCD_001435 IPR016192 APOBEC/CMP deaminase, zinc-binding VCD_001435 IPR016193 Cytidine deaminase-like VCD_001435 IPR015517 Deoxycytidylate deaminase-related VCD_001435 IPR035105 Deoxycytidylate deaminase domain VCD_001435 IPR002125 Cytidine and deoxycytidylate deaminase domain VCD_001435 IPR013404 Competence operon E, ComEB VCD_001437 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCD_001437 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_001437 IPR035906 MetI-like superfamily VCD_001439 IPR000914 Solute-binding protein family 5 domain VCD_001439 IPR023765 Solute-binding protein family 5, conserved site VCD_001439 IPR039424 Solute-binding protein family 5 VCD_001439 IPR030678 Peptide/nickel binding protein, MppA-type VCD_001440 IPR003593 AAA+ ATPase domain VCD_001440 IPR003439 ABC transporter-like VCD_001440 IPR017871 ABC transporter, conserved site VCD_001440 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001440 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_001441 IPR002323 Cytochrome c, class IE VCD_001441 IPR009056 Cytochrome c-like domain VCD_001441 IPR036909 Cytochrome c-like domain superfamily VCD_001442 IPR014017 UvrD-like DNA helicase, C-terminal VCD_001442 IPR005752 ATP-dependent DNA helicase Rep VCD_001442 IPR000212 DNA helicase, UvrD/REP type VCD_001442 IPR014016 UvrD-like helicase, ATP-binding domain VCD_001442 IPR013986 DExx box DNA helicase domain superfamily VCD_001442 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001442 IPR034739 UvrD/AddA helicase, N-terminal VCD_001443 IPR009057 Homeobox-like domain superfamily VCD_001443 IPR001647 DNA-binding HTH domain, TetR-type VCD_001443 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VCD_001444 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCD_001444 IPR006143 RND efflux pump, membrane fusion protein VCD_001445 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCD_001445 IPR001036 Acriflavin resistance protein VCD_001446 IPR007475 Ubiquinone biosynthesis accessory factor UbiK VCD_001447 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_001447 IPR036291 NAD(P)-binding domain superfamily VCD_001447 IPR013116 Ketol-acid reductoisomerase, N-terminal VCD_001447 IPR000506 Ketol-acid reductoisomerase, C-terminal VCD_001447 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VCD_001447 IPR013023 Ketol-acid reductoisomerase VCD_001448 IPR000847 Transcription regulator HTH, LysR VCD_001448 IPR036390 Winged helix DNA-binding domain superfamily VCD_001448 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain VCD_001448 IPR005119 LysR, substrate-binding VCD_001448 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001451 IPR008254 Flavodoxin/nitric oxide synthase VCD_001451 IPR026816 Flavodoxin domain VCD_001451 IPR029039 Flavoprotein-like superfamily VCD_001451 IPR001226 Flavodoxin, conserved site VCD_001452 IPR003445 Cation transporter VCD_001452 IPR004772 TrkH potassium transport family VCD_001453 IPR015796 Impact family, bacterial/archaeal VCD_001453 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VCD_001453 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VCD_001453 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001453 IPR036956 Impact, N-terminal domain superfamily VCD_001453 IPR001498 Impact, N-terminal VCD_001453 IPR023582 Impact family VCD_001453 IPR035647 EF-G domain III/V-like VCD_001454 IPR036291 NAD(P)-binding domain superfamily VCD_001454 IPR012799 Fatty oxidation complex, alpha subunit FadB VCD_001454 IPR001753 Enoyl-CoA hydratase/isomerase VCD_001454 IPR029045 ClpP/crotonase-like domain superfamily VCD_001454 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_001454 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VCD_001454 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VCD_001454 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VCD_001455 IPR020615 Thiolase, acyl-enzyme intermediate active site VCD_001455 IPR020610 Thiolase, active site VCD_001455 IPR020617 Thiolase, C-terminal VCD_001455 IPR016039 Thiolase-like VCD_001455 IPR002155 Thiolase VCD_001455 IPR012805 Acetyl-CoA C-acyltransferase FadA VCD_001455 IPR020613 Thiolase, conserved site VCD_001455 IPR020616 Thiolase, N-terminal VCD_001456 IPR005119 LysR, substrate-binding VCD_001456 IPR000847 Transcription regulator HTH, LysR VCD_001456 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001456 IPR036390 Winged helix DNA-binding domain superfamily VCD_001457 IPR011701 Major facilitator superfamily VCD_001457 IPR036259 MFS transporter superfamily VCD_001457 IPR020846 Major facilitator superfamily domain VCD_001457 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VCD_001458 IPR029044 Nucleotide-diphospho-sugar transferases VCD_001458 IPR011004 Trimeric LpxA-like superfamily VCD_001458 IPR038009 GlmU, C-terminal LbH domain VCD_001458 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase VCD_001458 IPR025877 MobA-like NTP transferase VCD_001458 IPR001451 Hexapeptide repeat VCD_001459 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily VCD_001459 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit VCD_001459 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VCD_001459 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal VCD_001459 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal VCD_001460 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal VCD_001460 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain VCD_001460 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VCD_001460 IPR005722 ATP synthase, F1 complex, beta subunit VCD_001460 IPR003593 AAA+ ATPase domain VCD_001460 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001460 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VCD_001460 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily VCD_001461 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site VCD_001461 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily VCD_001461 IPR000131 ATP synthase, F1 complex, gamma subunit VCD_001462 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily VCD_001462 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily VCD_001462 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain VCD_001462 IPR005294 ATP synthase, F1 complex, alpha subunit VCD_001462 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VCD_001462 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain VCD_001462 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily VCD_001462 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VCD_001462 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001462 IPR000793 ATP synthase, alpha subunit, C-terminal VCD_001463 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily VCD_001463 IPR020781 ATPase, OSCP/delta subunit, conserved site VCD_001463 IPR000711 ATPase, OSCP/delta subunit VCD_001464 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast VCD_001464 IPR005864 ATP synthase, F0 complex, subunit b, bacterial VCD_001464 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VCD_001465 IPR000454 ATP synthase, F0 complex, subunit C VCD_001465 IPR035921 F/V-ATP synthase subunit C superfamily VCD_001465 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site VCD_001465 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast VCD_001465 IPR038662 F1F0 ATP synthase subunit C superfamily VCD_001465 IPR002379 V-ATPase proteolipid subunit C-like domain VCD_001466 IPR035908 ATP synthase, F0 complex, subunit A superfamily VCD_001466 IPR023011 ATP synthase, F0 complex, subunit A, active site VCD_001466 IPR000568 ATP synthase, F0 complex, subunit A VCD_001467 IPR005598 ATP synthase protein I VCD_001468 IPR004437 ParB/RepB/Spo0J partition protein VCD_001468 IPR041468 ParB/Spo0J, HTH domain VCD_001468 IPR036086 ParB/Sulfiredoxin superfamily VCD_001468 IPR003115 ParB/Sulfiredoxin VCD_001469 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001469 IPR025669 AAA domain VCD_001470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001470 IPR003682 rRNA small subunit methyltransferase G VCD_001471 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG VCD_001471 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001471 IPR020595 MnmG-related, conserved site VCD_001471 IPR026904 GidA associated domain 3 VCD_001471 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related VCD_001472 IPR008254 Flavodoxin/nitric oxide synthase VCD_001472 IPR029039 Flavoprotein-like superfamily VCD_001473 IPR027368 tRNA modification GTPase MnmE domain 2 VCD_001473 IPR006073 GTP binding domain VCD_001473 IPR018948 GTP-binding protein TrmE, N-terminal VCD_001473 IPR031168 TrmE-type guanine nucleotide-binding domain VCD_001473 IPR005225 Small GTP-binding protein domain VCD_001473 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VCD_001473 IPR025867 MnmE, helical domain VCD_001473 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001473 IPR004520 tRNA modification GTPase MnmE VCD_001474 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VCD_001474 IPR028053 Membrane insertase YidC, N-terminal VCD_001474 IPR038221 YidC, periplasmic domain superfamily VCD_001474 IPR038210 Membrane insertase YidC, periplasmic domain VCD_001474 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 VCD_001474 IPR019998 Membrane insertase YidC VCD_001475 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001475 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001475 IPR000100 Ribonuclease P VCD_001476 IPR020939 Ribosomal protein L34, conserved site VCD_001476 IPR000271 Ribosomal protein L34 VCD_001477 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001477 IPR003593 AAA+ ATPase domain VCD_001477 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VCD_001477 IPR017871 ABC transporter, conserved site VCD_001477 IPR003439 ABC transporter-like VCD_001478 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_001478 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_001478 IPR035906 MetI-like superfamily VCD_001479 IPR001320 Ionotropic glutamate receptor VCD_001479 IPR018313 Solute-binding protein family 3, conserved site VCD_001479 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_001480 IPR010921 Trp repressor/replication initiator VCD_001480 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001480 IPR038454 DnaA, N-terminal domain superfamily VCD_001480 IPR024633 DnaA N-terminal domain VCD_001480 IPR013159 Chromosomal replication initiator, DnaA C-terminal VCD_001480 IPR013317 Chromosomal replication initiator protein DnaA VCD_001480 IPR018312 Chromosomal replication control, initiator DnaA, conserved site VCD_001480 IPR020591 Chromosomal replication control, initiator DnaA-like VCD_001480 IPR001957 Chromosomal replication control, initiator DnaA VCD_001480 IPR003593 AAA+ ATPase domain VCD_001481 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal VCD_001481 IPR001001 DNA polymerase III, beta sliding clamp VCD_001481 IPR022637 DNA polymerase III, beta sliding clamp, central VCD_001481 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal VCD_001482 IPR001238 DNA-binding, RecF VCD_001482 IPR042174 DNA-binding RecF, domain 2 VCD_001482 IPR003395 RecF/RecN/SMC, N-terminal VCD_001482 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001482 IPR018078 DNA-binding, RecF, conserved site VCD_001483 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal VCD_001483 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VCD_001483 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VCD_001483 IPR001241 DNA topoisomerase, type IIA VCD_001483 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001483 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001483 IPR018522 DNA topoisomerase, type IIA, conserved site VCD_001483 IPR006171 TOPRIM domain VCD_001483 IPR034160 DNA gyrase subunit B, TOPRIM domain VCD_001483 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001483 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001483 IPR041423 DNA gyrase subunit B insert domain VCD_001483 IPR011557 DNA gyrase, subunit B VCD_001483 IPR002288 DNA gyrase B subunit, C-terminal VCD_001486 IPR023728 Small heat shock protein IbpA VCD_001486 IPR008978 HSP20-like chaperone VCD_001486 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain VCD_001486 IPR002068 Alpha crystallin/Hsp20 domain VCD_001487 IPR004839 Aminotransferase, class I/classII VCD_001487 IPR015424 Pyridoxal phosphate-dependent transferase VCD_001487 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_001488 IPR008909 DALR anticodon binding VCD_001488 IPR015944 Glycine-tRNA ligase, beta subunit VCD_001488 IPR006194 Glycine-tRNA synthetase, heterodimeric VCD_001489 IPR002310 Glycine-tRNA ligase, alpha subunit VCD_001489 IPR006194 Glycine-tRNA synthetase, heterodimeric VCD_001490 IPR001727 Gdt1 family VCD_001492 IPR001455 TusA-like domain VCD_001492 IPR022931 Sulfur carrier protein TusA VCD_001492 IPR036868 TusA-like domain superfamily VCD_001494 IPR036291 NAD(P)-binding domain superfamily VCD_001494 IPR014188 Acrylyl-CoA reductase AcuI VCD_001494 IPR013149 Alcohol dehydrogenase, C-terminal VCD_001494 IPR020843 Polyketide synthase, enoylreductase domain VCD_001494 IPR011032 GroES-like superfamily VCD_001494 IPR013154 Alcohol dehydrogenase, N-terminal VCD_001495 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCD_001495 IPR001926 Pyridoxal-phosphate dependent enzyme VCD_001495 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VCD_001495 IPR001721 Threonine dehydratase, ACT-like domain VCD_001495 IPR038110 Threonine dehydratase, ACT-like domain superfamily VCD_001495 IPR005787 Threonine dehydratase, biosynthetic VCD_001496 IPR042096 Dihydroxy-acid dehydratase, C-terminal VCD_001496 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VCD_001496 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VCD_001496 IPR037237 IlvD/EDD, N-terminal domain VCD_001496 IPR004404 Dihydroxy-acid dehydratase VCD_001497 IPR033939 Branched-chain aminotransferase VCD_001497 IPR036038 Aminotransferase-like, PLP-dependent enzymes VCD_001497 IPR005785 Branched-chain amino acid aminotransferase I VCD_001497 IPR001544 Aminotransferase class IV VCD_001497 IPR018300 Aminotransferase, class IV, conserved site VCD_001499 IPR039368 Acetolactate synthase large subunit, TPP binding domain VCD_001499 IPR029061 Thiamin diphosphate-binding fold VCD_001499 IPR029035 DHS-like NAD/FAD-binding domain superfamily VCD_001499 IPR012846 Acetolactate synthase, large subunit, biosynthetic VCD_001499 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VCD_001499 IPR012000 Thiamine pyrophosphate enzyme, central domain VCD_001499 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VCD_001499 IPR000399 TPP-binding enzyme, conserved site VCD_001500 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001500 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001500 IPR025158 Mg chelatase-related protein, C-terminal domain VCD_001500 IPR004482 Mg chelatase-related protein VCD_001500 IPR001208 MCM domain VCD_001500 IPR003593 AAA+ ATPase domain VCD_001500 IPR000523 Magnesium chelatase ChlI domain VCD_001501 IPR002123 Phospholipid/glycerol acyltransferase VCD_001502 IPR013766 Thioredoxin domain VCD_001502 IPR036249 Thioredoxin-like superfamily VCD_001502 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VCD_001502 IPR001853 DSBA-like thioredoxin domain VCD_001503 IPR011009 Protein kinase-like domain superfamily VCD_001503 IPR032882 SrkA/RdoA protein kinase VCD_001503 IPR002575 Aminoglycoside phosphotransferase VCD_001504 IPR013783 Immunoglobulin-like fold VCD_001504 IPR032879 FixG, C-terminal immunoglobulin-like domain VCD_001504 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_001504 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_001504 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG VCD_001505 IPR009383 Protein of unknown function DUF1040 VCD_001505 IPR038134 YihD-like superfamily VCD_001508 IPR014756 Immunoglobulin E-set VCD_001508 IPR014752 Arrestin, C-terminal VCD_001508 IPR009776 Sporulation stage 0, protein M VCD_001509 IPR004254 AdipoR/Haemolysin-III-related VCD_001509 IPR005744 Hly-III VCD_001511 IPR004772 TrkH potassium transport family VCD_001511 IPR003445 Cation transporter VCD_001512 IPR006036 Potassium uptake protein TrkA VCD_001512 IPR036291 NAD(P)-binding domain superfamily VCD_001512 IPR006037 Regulator of K+ conductance, C-terminal VCD_001512 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VCD_001512 IPR003148 Regulator of K+ conductance, N-terminal VCD_001513 IPR023267 RNA (C5-cytosine) methyltransferase VCD_001513 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VCD_001513 IPR004573 rRNA small subunit methyltransferase B VCD_001513 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type VCD_001513 IPR006027 NusB/RsmB/TIM44 VCD_001513 IPR035926 NusB-like superfamily VCD_001513 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001514 IPR002376 Formyl transferase, N-terminal VCD_001514 IPR036477 Formyl transferase, N-terminal domain superfamily VCD_001514 IPR011034 Formyl transferase-like, C-terminal domain superfamily VCD_001514 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VCD_001514 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain VCD_001514 IPR005794 Methionyl-tRNA formyltransferase VCD_001514 IPR037022 Formyl transferase, C-terminal domain superfamily VCD_001514 IPR005793 Formyl transferase, C-terminal VCD_001515 IPR036821 Peptide deformylase superfamily VCD_001515 IPR023635 Peptide deformylase VCD_001516 IPR018392 LysM domain VCD_001516 IPR036779 LysM domain superfamily VCD_001517 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001517 IPR041614 DprA, winged helix domain VCD_001517 IPR003488 DNA recombination-mediator protein A VCD_001518 IPR007456 Smg VCD_001519 IPR000380 DNA topoisomerase, type IA VCD_001519 IPR013498 DNA topoisomerase, type IA, zn finger VCD_001520 IPR011761 ATP-grasp fold VCD_001520 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VCD_001520 IPR013815 ATP-grasp fold, subdomain 1 VCD_001520 IPR016185 Pre-ATP-grasp domain superfamily VCD_001520 IPR011054 Rudiment single hybrid motif VCD_001520 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain VCD_001520 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit VCD_001521 IPR033747 Class I PurE VCD_001521 IPR000031 PurE domain VCD_001521 IPR024694 PurE, prokaryotic type VCD_001521 IPR035893 PurE domain superfamily VCD_001522 IPR023535 Threonylcarbamoyl-AMP synthase VCD_001522 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VCD_001522 IPR006070 YrdC-like domain VCD_001523 IPR018375 Coproporphyrinogen III oxidase, conserved site VCD_001523 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily VCD_001523 IPR001260 Coproporphyrinogen III oxidase, aerobic VCD_001524 IPR022893 Shikimate dehydrogenase family VCD_001524 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VCD_001524 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal VCD_001524 IPR011342 Shikimate dehydrogenase VCD_001524 IPR041121 SDH, C-terminal VCD_001524 IPR036291 NAD(P)-binding domain superfamily VCD_001526 IPR001451 Hexapeptide repeat VCD_001526 IPR011004 Trimeric LpxA-like superfamily VCD_001528 IPR003691 Putative fluoride ion transporter CrcB VCD_001529 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B VCD_001529 IPR025747 ThiC-associated domain VCD_001529 IPR038521 ThiC/Bza superfamily VCD_001529 IPR037509 Phosphomethylpyrimidine synthase VCD_001530 IPR013785 Aldolase-type TIM barrel VCD_001530 IPR036206 Thiamin phosphate synthase superfamily VCD_001530 IPR022998 Thiamine phosphate synthase/TenI VCD_001530 IPR034291 Thiamine phosphate synthase VCD_001531 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF VCD_001531 IPR000594 THIF-type NAD/FAD binding fold VCD_001531 IPR035985 Ubiquitin-activating enzyme VCD_001532 IPR003749 Sulfur carrier ThiS/MoaD-like VCD_001532 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VCD_001532 IPR010035 ThiS, thiamine-biosynthesis VCD_001532 IPR012675 Beta-grasp domain superfamily VCD_001533 IPR008867 Thiazole synthase VCD_001533 IPR013785 Aldolase-type TIM barrel VCD_001533 IPR033983 Thiazole synthase ThiG VCD_001534 IPR013785 Aldolase-type TIM barrel VCD_001534 IPR034428 ThiH/NocL/HydG-like VCD_001534 IPR012726 Thiazole biosynthesis ThiH VCD_001534 IPR007197 Radical SAM VCD_001534 IPR010722 Biotin and thiamin synthesis-associated domain VCD_001535 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site VCD_001535 IPR036005 Creatinase/aminopeptidase-like VCD_001535 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site VCD_001535 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VCD_001535 IPR036005 Creatinase/aminopeptidase-like VCD_001535 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VCD_001535 IPR000587 Creatinase, N-terminal VCD_001535 IPR000994 Peptidase M24 VCD_001535 IPR001714 Peptidase M24, methionine aminopeptidase VCD_001535 IPR000994 Peptidase M24 VCD_001535 IPR000587 Creatinase, N-terminal VCD_001535 IPR001714 Peptidase M24, methionine aminopeptidase VCD_001536 IPR005119 LysR, substrate-binding VCD_001536 IPR000847 Transcription regulator HTH, LysR VCD_001536 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain VCD_001536 IPR036390 Winged helix DNA-binding domain superfamily VCD_001536 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001536 IPR023746 Transcription regulator HTH, YidZ VCD_001537 IPR020846 Major facilitator superfamily domain VCD_001537 IPR011701 Major facilitator superfamily VCD_001537 IPR036259 MFS transporter superfamily VCD_001537 IPR023697 Multidrug resistance protein MdtL VCD_001539 IPR000485 AsnC-type HTH domain VCD_001539 IPR036390 Winged helix DNA-binding domain superfamily VCD_001539 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VCD_001539 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCD_001539 IPR019888 Transcription regulator AsnC-type VCD_001539 IPR011008 Dimeric alpha-beta barrel VCD_001539 IPR011991 ArsR-like helix-turn-helix domain VCD_001539 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001540 IPR000160 GGDEF domain VCD_001540 IPR013656 PAS fold-4 VCD_001540 IPR035965 PAS domain superfamily VCD_001540 IPR035919 EAL domain superfamily VCD_001540 IPR000014 PAS domain VCD_001540 IPR029787 Nucleotide cyclase VCD_001540 IPR001633 EAL domain VCD_001541 IPR007536 Ribosomal RNA small subunit methyltransferase J VCD_001541 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001543 IPR004779 Carboxylate/Amino Acid/Amine Transporter VCD_001543 IPR000620 EamA domain VCD_001544 IPR006016 UspA VCD_001544 IPR006015 Universal stress protein A family VCD_001544 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001545 IPR001519 Ferritin VCD_001545 IPR008331 Ferritin/DPS protein domain VCD_001545 IPR009040 Ferritin-like diiron domain VCD_001545 IPR012347 Ferritin-like VCD_001545 IPR041719 Ferritin, prokaryotic-type VCD_001545 IPR009078 Ferritin-like superfamily VCD_001546 IPR019598 Universal stress protein B VCD_001547 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like VCD_001547 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001547 IPR023166 HI0933-like insert domain superfamily VCD_001549 IPR003798 DNA recombination RmuC VCD_001550 IPR023576 UbiE/COQ5 methyltransferase, conserved site VCD_001550 IPR004033 UbiE/COQ5 methyltransferase VCD_001550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001551 IPR038989 Ubiquinone biosynthesis protein UbiJ VCD_001551 IPR003033 SCP2 sterol-binding domain VCD_001551 IPR036527 SCP2 sterol-binding domain superfamily VCD_001552 IPR010232 Probable protein kinase UbiB VCD_001552 IPR011009 Protein kinase-like domain superfamily VCD_001552 IPR004147 UbiB domain VCD_001553 IPR003369 Sec-independent protein translocase protein TatA/B/E VCD_001553 IPR006312 Sec-independent protein translocase protein TatA/E VCD_001554 IPR018448 Twin-arginine translocation protein TatB VCD_001554 IPR003369 Sec-independent protein translocase protein TatA/B/E VCD_001555 IPR019820 Sec-independent periplasmic protein translocase, conserved site VCD_001555 IPR002033 Sec-independent periplasmic protein translocase TatC VCD_001556 IPR004852 Di-haem cytochrome c peroxidase VCD_001556 IPR009056 Cytochrome c-like domain VCD_001556 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase VCD_001556 IPR036909 Cytochrome c-like domain superfamily VCD_001557 IPR002528 Multi antimicrobial extrusion protein VCD_001559 IPR036390 Winged helix DNA-binding domain superfamily VCD_001559 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001559 IPR006199 LexA repressor, DNA-binding domain VCD_001559 IPR036286 LexA/Signal peptidase-like superfamily VCD_001559 IPR039418 LexA-like VCD_001559 IPR006200 Transcription regulator LexA VCD_001559 IPR006197 Peptidase S24, LexA-like VCD_001559 IPR015927 Peptidase S24/S26A/S26B/S26C VCD_001560 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase VCD_001560 IPR041728 GPAT/DHAPAT, acyltransferase domain VCD_001560 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB VCD_001560 IPR002123 Phospholipid/glycerol acyltransferase VCD_001561 IPR000537 UbiA prenyltransferase family VCD_001561 IPR006370 4-hydroxybenzoate polyprenyltransferase-like VCD_001561 IPR039653 Prenyltransferase VCD_001562 IPR007440 Chorismate--pyruvate lyase VCD_001562 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VCD_001563 IPR005503 Flagellar basal body-associated protein FliL VCD_001564 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding VCD_001564 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_001564 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily VCD_001564 IPR004090 Chemotaxis methyl-accepting receptor VCD_001564 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site VCD_001564 IPR003660 HAMP domain VCD_001565 IPR035952 Rhomboid-like superfamily VCD_001565 IPR022764 Peptidase S54, rhomboid domain VCD_001565 IPR022732 Peptidase S54, GlpG peptidase, N-terminal VCD_001565 IPR038236 GlpG peptidase, N-terminal domain superfamily VCD_001565 IPR023662 Rhomboid protease GlpG VCD_001566 IPR023695 Thiosulfate sulfurtransferase, bacterial VCD_001566 IPR036873 Rhodanese-like domain superfamily VCD_001566 IPR001763 Rhodanese-like domain VCD_001567 IPR032466 Metal-dependent hydrolase VCD_001567 IPR001130 TatD family VCD_001567 IPR018228 Deoxyribonuclease, TatD-related, conserved site VCD_001567 IPR015991 Uncharacterised hydrolase TatD-type VCD_001568 IPR013785 Aldolase-type TIM barrel VCD_001568 IPR001731 Delta-aminolevulinic acid dehydratase VCD_001568 IPR030656 Delta-aminolevulinic acid dehydratase, active site VCD_001570 IPR002562 3'-5' exonuclease domain VCD_001570 IPR019760 DNA-directed DNA polymerase, family A, conserved site VCD_001570 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VCD_001570 IPR001098 DNA-directed DNA polymerase, family A, palm domain VCD_001570 IPR036397 Ribonuclease H superfamily VCD_001570 IPR012337 Ribonuclease H-like superfamily VCD_001570 IPR029060 PIN-like domain superfamily VCD_001570 IPR008918 Helix-hairpin-helix motif, class 2 VCD_001570 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VCD_001570 IPR018320 DNA polymerase 1 VCD_001570 IPR020045 DNA polymerase I-like, H3TH domain VCD_001570 IPR002421 5'-3' exonuclease, N-terminal VCD_001570 IPR002298 DNA polymerase A VCD_001571 IPR030393 EngB-type guanine nucleotide-binding (G) domain VCD_001571 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC VCD_001571 IPR006073 GTP binding domain VCD_001571 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001572 IPR009056 Cytochrome c-like domain VCD_001572 IPR036909 Cytochrome c-like domain superfamily VCD_001572 IPR024167 Cytochrome c4-like VCD_001574 IPR007336 Der GTPase activator VCD_001575 IPR019617 Domain of unknown function DUF2489 VCD_001576 IPR006638 Elp3/MiaB/NifB VCD_001576 IPR034505 Anaerobic coproporphyrinogen-III oxidase VCD_001576 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN VCD_001576 IPR023404 Radical SAM, alpha/beta horseshoe VCD_001576 IPR007197 Radical SAM VCD_001576 IPR010723 HemN, C-terminal VCD_001577 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_001577 IPR010817 HemY, N-terminal VCD_001577 IPR005254 Heme biosynthesis-associated TPR protein VCD_001578 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VCD_001579 IPR039793 Uroporphyrinogen-III synthase VCD_001579 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase VCD_001579 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily VCD_001580 IPR000860 Porphobilinogen deaminase VCD_001580 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site VCD_001580 IPR022418 Porphobilinogen deaminase, C-terminal VCD_001580 IPR022417 Porphobilinogen deaminase, N-terminal VCD_001580 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily VCD_001582 IPR000274 Adenylate cyclase, class-I VCD_001582 IPR024686 Adenylate cyclase class-I, conserved site VCD_001582 IPR024685 Adenylate cyclase class-I, N-terminal domain VCD_001583 IPR020895 Frataxin conserved site VCD_001583 IPR036524 Frataxin/CyaY superfamily VCD_001583 IPR002908 Frataxin/CyaY VCD_001585 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VCD_001585 IPR000183 Ornithine/DAP/Arg decarboxylase VCD_001585 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VCD_001585 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal VCD_001585 IPR002986 Diaminopimelate decarboxylase, LysA VCD_001585 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VCD_001585 IPR029066 PLP-binding barrel VCD_001585 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VCD_001586 IPR018510 Diaminopimelate epimerase, active site VCD_001586 IPR001653 Diaminopimelate epimerase, DapF VCD_001587 IPR029016 GAF-like domain superfamily VCD_001587 IPR007435 Protein of unknown function DUF484 VCD_001588 IPR004107 Integrase, SAM-like, N-terminal VCD_001588 IPR023009 Tyrosine recombinase XerC/XerD VCD_001588 IPR011010 DNA breaking-rejoining enzyme, catalytic core VCD_001588 IPR011931 Tyrosine recombinase XerC VCD_001588 IPR010998 Integrase/recombinase, N-terminal VCD_001588 IPR002104 Integrase, catalytic domain VCD_001588 IPR013762 Integrase-like, catalytic domain superfamily VCD_001589 IPR036412 HAD-like superfamily VCD_001589 IPR006439 HAD hydrolase, subfamily IA VCD_001589 IPR041492 Haloacid dehalogenase-like hydrolase VCD_001589 IPR023214 HAD superfamily VCD_001590 IPR000160 GGDEF domain VCD_001590 IPR001633 EAL domain VCD_001590 IPR035919 EAL domain superfamily VCD_001590 IPR019494 FIST, C-domain VCD_001590 IPR013702 FIST domain, N-terminal VCD_001590 IPR029787 Nucleotide cyclase VCD_001593 IPR023214 HAD superfamily VCD_001593 IPR006379 HAD-superfamily hydrolase, subfamily IIB VCD_001593 IPR036412 HAD-like superfamily VCD_001593 IPR000150 Cof family VCD_001594 IPR022742 Serine aminopeptidase, S33 VCD_001594 IPR029058 Alpha/Beta hydrolase fold VCD_001595 IPR001123 Amino acid exporter protein, LeuE-type VCD_001596 IPR001633 EAL domain VCD_001596 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VCD_001596 IPR035919 EAL domain superfamily VCD_001596 IPR013976 Metal-dependent hydrolase HDOD VCD_001597 IPR008331 Ferritin/DPS protein domain VCD_001597 IPR009078 Ferritin-like superfamily VCD_001597 IPR012347 Ferritin-like VCD_001597 IPR002177 DNA-binding protein Dps VCD_001597 IPR023188 DNA-binding protein Dps, conserved site VCD_001603 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_001603 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001603 IPR004398 RNA methyltransferase, RsmD VCD_001604 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VCD_001604 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001604 IPR013822 Signal recognition particle SRP54, helical bundle VCD_001604 IPR004390 Signal-recognition particle receptor FtsY VCD_001604 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily VCD_001604 IPR003593 AAA+ ATPase domain VCD_001604 IPR036225 SRP/SRP receptor, N-terminal VCD_001605 IPR003593 AAA+ ATPase domain VCD_001605 IPR003439 ABC transporter-like VCD_001605 IPR005286 Cell division protein FtsE, ATP-binding VCD_001605 IPR017871 ABC transporter, conserved site VCD_001605 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001606 IPR040690 FtsX, extracellular domain VCD_001606 IPR004513 Cell division protein FtsX VCD_001607 IPR000943 RNA polymerase sigma-70 VCD_001607 IPR007627 RNA polymerase sigma-70 region 2 VCD_001607 IPR007630 RNA polymerase sigma-70 region 4 VCD_001607 IPR014284 RNA polymerase sigma-70 like domain VCD_001607 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001607 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria VCD_001607 IPR013324 RNA polymerase sigma factor, region 3/4-like VCD_001607 IPR013325 RNA polymerase sigma factor, region 2 VCD_001607 IPR009042 RNA polymerase sigma-70 region 1.2 VCD_001608 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VCD_001608 IPR022962 Soluble pyridine nucleotide transhydrogenase VCD_001608 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VCD_001608 IPR023753 FAD/NAD(P)-binding domain VCD_001608 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001608 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCD_001609 IPR009057 Homeobox-like domain superfamily VCD_001609 IPR001647 DNA-binding HTH domain, TetR-type VCD_001609 IPR023764 Transcriptional repressor HTH, FabR VCD_001611 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001611 IPR030391 RNA methyltransferase TrmA, conserved site VCD_001611 IPR010280 (Uracil-5)-methyltransferase family VCD_001611 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA VCD_001611 IPR030390 RNA methyltransferase TrmA, active site VCD_001612 IPR037066 TonB-dependent receptor, plug domain superfamily VCD_001612 IPR000531 TonB-dependent receptor-like, beta-barrel VCD_001612 IPR010916 TonB box, conserved site VCD_001612 IPR012910 TonB-dependent receptor, plug domain VCD_001612 IPR039426 Vitamin B12 transporter BtuB-like VCD_001612 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VCD_001612 IPR010917 TonB-dependent receptor, conserved site VCD_001612 IPR010101 TonB-dependent vitamin B12 transporter BtuB VCD_001613 IPR022398 Peptidase S8, subtilisin, His-active site VCD_001613 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 VCD_001613 IPR023828 Peptidase S8, subtilisin, Ser-active site VCD_001613 IPR036852 Peptidase S8/S53 domain superfamily VCD_001613 IPR034193 Proteinase K-like catalytic domain VCD_001613 IPR007280 Peptidase, C-terminal, archaeal/bacterial VCD_001613 IPR000209 Peptidase S8/S53 domain VCD_001613 IPR015500 Peptidase S8, subtilisin-related VCD_001613 IPR023827 Peptidase S8, subtilisin, Asp-active site VCD_001613 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily VCD_001614 IPR004391 Glutamate racemase VCD_001614 IPR015942 Asp/Glu/hydantoin racemase VCD_001614 IPR001920 Asp/Glu racemase VCD_001614 IPR018187 Asp/Glu racemase, active site 1 VCD_001617 IPR001365 Adenosine/AMP deaminase domain VCD_001617 IPR028893 Adenosine deaminase VCD_001617 IPR006330 Adenosine/adenine deaminase VCD_001617 IPR032466 Metal-dependent hydrolase VCD_001618 IPR000014 PAS domain VCD_001618 IPR029787 Nucleotide cyclase VCD_001618 IPR005330 MHYT domain VCD_001618 IPR000160 GGDEF domain VCD_001618 IPR035919 EAL domain superfamily VCD_001618 IPR001633 EAL domain VCD_001618 IPR035965 PAS domain superfamily VCD_001619 IPR003593 AAA+ ATPase domain VCD_001619 IPR011006 CheY-like superfamily VCD_001619 IPR009057 Homeobox-like domain superfamily VCD_001619 IPR002197 DNA binding HTH domain, Fis-type VCD_001619 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001619 IPR001789 Signal transduction response regulator, receiver domain VCD_001619 IPR025944 Sigma-54 interaction domain, conserved site VCD_001619 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_001619 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_001619 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_001619 IPR010114 DNA-binding transcriptional regulator NtrC VCD_001620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_001620 IPR013767 PAS fold VCD_001620 IPR035965 PAS domain superfamily VCD_001620 IPR000014 PAS domain VCD_001620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_001620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_001620 IPR005467 Histidine kinase domain VCD_001620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001620 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001622 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VCD_001622 IPR008147 Glutamine synthetase, beta-Grasp domain VCD_001622 IPR008146 Glutamine synthetase, catalytic domain VCD_001622 IPR027303 Glutamine synthetase, glycine-rich site VCD_001622 IPR004809 Glutamine synthetase type I VCD_001622 IPR036651 Glutamine synthetase, N-terminal domain superfamily VCD_001622 IPR001637 Glutamine synthetase class-I, adenylation site VCD_001622 IPR027302 Glutamine synthetase, N-terminal conserved site VCD_001625 IPR005337 RapZ-like family VCD_001625 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001626 IPR023679 Uncharacterised protein family UPF0761, bacterial VCD_001626 IPR017039 Virulence factor BrkB VCD_001627 IPR003732 D-aminoacyl-tRNA deacylase DTD VCD_001627 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VCD_001628 IPR012660 Thioesterase, putative VCD_001628 IPR029069 HotDog domain superfamily VCD_001628 IPR016181 Acyl-CoA N-acyltransferase VCD_001628 IPR000182 GNAT domain VCD_001630 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal VCD_001630 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal VCD_001630 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site VCD_001630 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising VCD_001631 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VCD_001631 IPR016154 Heat shock protein Hsp33, C-terminal VCD_001631 IPR000397 Heat shock protein Hsp33 VCD_001631 IPR016153 Heat shock protein Hsp33, N-terminal VCD_001632 IPR036986 RNA-binding S4 domain superfamily VCD_001632 IPR002942 RNA-binding S4 domain VCD_001632 IPR025708 Heat shock protein 15 VCD_001633 IPR024961 Type II secretion system protein C, N-terminal VCD_001633 IPR001639 Type II secretion system protein C VCD_001633 IPR036034 PDZ superfamily VCD_001634 IPR038591 NolW-like superfamily VCD_001634 IPR004845 Type II secretion system GspD, conserved site VCD_001634 IPR005644 NolW-like VCD_001634 IPR001775 GspD/PilQ family VCD_001634 IPR013356 Type II secretion system GspD VCD_001634 IPR004846 Type II/III secretion system VCD_001635 IPR042181 Type II secretion system, protein E, N-terminal VCD_001635 IPR001482 Type II/IV secretion system protein VCD_001635 IPR037257 General secretory system II, protein E, N-terminal superfamily VCD_001635 IPR013369 Type II secretion system GspE VCD_001635 IPR003593 AAA+ ATPase domain VCD_001635 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001636 IPR042094 Type II secretion system F domain superfamily VCD_001636 IPR018076 Type II secretion system F domain VCD_001636 IPR001992 Type II secretion system conserved site VCD_001636 IPR011850 General secretion pathway protein F VCD_001636 IPR003004 GspF/PilC family VCD_001637 IPR000983 Bacterial general secretion pathway protein G-type pilin VCD_001637 IPR012902 Prokaryotic N-terminal methylation site VCD_001637 IPR013545 Type II secretion system protein G VCD_001637 IPR010054 General secretion pathway protein G VCD_001638 IPR022346 General secretion pathway, GspH VCD_001638 IPR002416 Type II secretion system protein H VCD_001638 IPR012902 Prokaryotic N-terminal methylation site VCD_001639 IPR012902 Prokaryotic N-terminal methylation site VCD_001639 IPR003413 Type II secretion system protein I domain VCD_001639 IPR010052 Type II secretion system protein I VCD_001640 IPR012902 Prokaryotic N-terminal methylation site VCD_001640 IPR010055 Type II secretion system protein J VCD_001641 IPR038072 GspK, central domain superfamily VCD_001641 IPR005628 General secretion pathway protein K VCD_001642 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VCD_001642 IPR025691 GspL periplasmic domain VCD_001642 IPR007812 Type II secretion system protein L VCD_001643 IPR007690 Type II secretion system, protein M VCD_001643 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VCD_001644 IPR022792 Type II secretion system, protein N VCD_001644 IPR000645 Type II secretion system protein N, conserved site VCD_001645 IPR000760 Inositol monophosphatase-like VCD_001645 IPR020583 Inositol monophosphatase, metal-binding site VCD_001645 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ VCD_001645 IPR020550 Inositol monophosphatase, conserved site VCD_001646 IPR020084 NUDIX hydrolase, conserved site VCD_001646 IPR000086 NUDIX hydrolase domain VCD_001646 IPR015797 NUDIX hydrolase-like domain superfamily VCD_001647 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal VCD_001647 IPR034904 Fe-S cluster assembly domain superfamily VCD_001647 IPR000361 FeS cluster biogenesis VCD_001647 IPR017726 Fe/S biogenesis protein NfuA VCD_001647 IPR035903 HesB-like domain superfamily VCD_001648 IPR029057 Phosphoribosyltransferase-like VCD_001648 IPR000836 Phosphoribosyltransferase domain VCD_001648 IPR005222 Competence protein ComF VCD_001649 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase VCD_001649 IPR000073 Alpha/beta hydrolase fold-1 VCD_001649 IPR029058 Alpha/Beta hydrolase fold VCD_001651 IPR041692 HHH domain 9 VCD_001651 IPR010994 RuvA domain 2-like VCD_001651 IPR022967 RNA-binding domain, S1 VCD_001651 IPR012337 Ribonuclease H-like superfamily VCD_001651 IPR006641 YqgF/RNase H-like domain VCD_001651 IPR032639 Tex protein, YqgF-like domain VCD_001651 IPR018974 Tex-like protein, N-terminal VCD_001651 IPR012340 Nucleic acid-binding, OB-fold VCD_001651 IPR023319 Tex-like protein, HTH domain superfamily VCD_001651 IPR037027 YqgF/RNase H-like domain superfamily VCD_001651 IPR003029 S1 domain VCD_001651 IPR023323 Tex-like domain superfamily VCD_001652 IPR006358 Transcription elongation factor GreB VCD_001652 IPR023459 Transcription elongation factor GreA/GreB family VCD_001652 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VCD_001652 IPR028624 Transcription elongation factor GreA/GreB VCD_001652 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VCD_001652 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VCD_001652 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VCD_001652 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily VCD_001653 IPR011006 CheY-like superfamily VCD_001653 IPR016032 Signal transduction response regulator, C-terminal effector VCD_001653 IPR001789 Signal transduction response regulator, receiver domain VCD_001653 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_001653 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001653 IPR039420 Transcriptional regulatory protein WalR-like VCD_001654 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_001654 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_001654 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_001654 IPR005467 Histidine kinase domain VCD_001654 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001654 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001654 IPR003660 HAMP domain VCD_001655 IPR006043 Xanthine/uracil/vitamin C permease VCD_001655 IPR006042 Xanthine/uracil permease VCD_001656 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001656 IPR033454 RecG, wedge domain VCD_001656 IPR001650 Helicase, C-terminal VCD_001656 IPR004609 ATP-dependent DNA helicase RecG VCD_001656 IPR011545 DEAD/DEAH box helicase domain VCD_001656 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_001656 IPR012340 Nucleic acid-binding, OB-fold VCD_001657 IPR004811 RelA/SpoT family VCD_001657 IPR012676 TGS-like VCD_001657 IPR033655 RelA, TGS domain VCD_001657 IPR004095 TGS VCD_001657 IPR007685 RelA/SpoT VCD_001657 IPR003607 HD/PDEase domain VCD_001657 IPR002912 ACT domain VCD_001657 IPR012675 Beta-grasp domain superfamily VCD_001658 IPR012293 RNA polymerase subunit, RPB6/omega VCD_001658 IPR036161 RPB6/omega subunit-like superfamily VCD_001658 IPR006110 RNA polymerase, subunit omega/K/RPB6 VCD_001658 IPR003716 DNA-directed RNA polymerase, omega subunit VCD_001659 IPR017665 Guanylate kinase VCD_001659 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VCD_001659 IPR008144 Guanylate kinase-like domain VCD_001659 IPR020590 Guanylate kinase, conserved site VCD_001659 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001660 IPR003744 Queuosine precursor transporter VCD_001661 IPR019899 Sodium/solute symporter, VC2705 subfamily VCD_001661 IPR001734 Sodium/solute symporter VCD_001661 IPR038377 Sodium/glucose symporter superfamily VCD_001663 IPR036318 FAD-binding, type PCMH-like superfamily VCD_001663 IPR006153 Cation/H+ exchanger VCD_001663 IPR006037 Regulator of K+ conductance, C-terminal VCD_001663 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VCD_001663 IPR005170 Transporter-associated domain VCD_001663 IPR023729 K(+)/H(+) antiporter NhaP2 VCD_001663 IPR030151 K(+)/H(+) antiporter NhaP VCD_001663 IPR038770 Sodium/solute symporter superfamily VCD_001664 IPR001789 Signal transduction response regulator, receiver domain VCD_001664 IPR000792 Transcription regulator LuxR, C-terminal VCD_001664 IPR016032 Signal transduction response regulator, C-terminal effector VCD_001664 IPR011006 CheY-like superfamily VCD_001665 IPR013766 Thioredoxin domain VCD_001665 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VCD_001665 IPR035671 DsbD gamma VCD_001665 IPR022910 Thiol:disulphide interchange protein DsbD VCD_001665 IPR017937 Thioredoxin, conserved site VCD_001665 IPR003834 Cytochrome C biogenesis protein, transmembrane domain VCD_001665 IPR036249 Thioredoxin-like superfamily VCD_001665 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VCD_001667 IPR014756 Immunoglobulin E-set VCD_001667 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VCD_001667 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VCD_001667 IPR004193 Glycoside hydrolase, family 13, N-terminal VCD_001667 IPR013780 Glycosyl hydrolase, all-beta VCD_001667 IPR041111 Pullulanase, Ins domain VCD_001667 IPR005323 Pullulanase, carbohydrate-binding module 41 VCD_001667 IPR013784 Carbohydrate-binding-like fold VCD_001667 IPR040671 Pullulanase, N2 domain VCD_001667 IPR013783 Immunoglobulin-like fold VCD_001667 IPR017853 Glycoside hydrolase superfamily VCD_001667 IPR011839 Alpha-1,6-glucosidases, pullulanase-type VCD_001669 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VCD_001670 IPR008948 L-Aspartase-like VCD_001670 IPR022761 Fumarate lyase, N-terminal VCD_001670 IPR000362 Fumarate lyase family VCD_001670 IPR020557 Fumarate lyase, conserved site VCD_001670 IPR018951 Fumarase C, C-terminal VCD_001670 IPR024083 Fumarase/histidase, N-terminal VCD_001670 IPR004708 Aspartate ammonia-lyase VCD_001671 IPR029787 Nucleotide cyclase VCD_001671 IPR000160 GGDEF domain VCD_001671 IPR033424 Membrane-associated sensor domain VCD_001672 IPR007313 FxsA cytoplasmic membrane protein VCD_001673 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCD_001673 IPR029028 Alpha/beta knot methyltransferases VCD_001673 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase VCD_001673 IPR001537 tRNA/rRNA methyltransferase, SpoU type VCD_001674 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily VCD_001674 IPR019832 Manganese/iron superoxide dismutase, C-terminal VCD_001674 IPR019831 Manganese/iron superoxide dismutase, N-terminal VCD_001674 IPR001189 Manganese/iron superoxide dismutase VCD_001674 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily VCD_001674 IPR019833 Manganese/iron superoxide dismutase, binding site VCD_001675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_001675 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_001675 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_001675 IPR005467 Histidine kinase domain VCD_001675 IPR032404 Two-component sensor protein CpxA, periplasmic domain VCD_001675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001675 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001675 IPR003660 HAMP domain VCD_001675 IPR038515 CpxA, periplasmic domain superfamily VCD_001676 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001676 IPR039420 Transcriptional regulatory protein WalR-like VCD_001676 IPR001789 Signal transduction response regulator, receiver domain VCD_001676 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_001676 IPR011006 CheY-like superfamily VCD_001678 IPR002524 Cation efflux protein VCD_001678 IPR027470 Cation efflux protein, cytoplasmic domain VCD_001678 IPR036837 Cation efflux protein, cytoplasmic domain superfamily VCD_001678 IPR023783 Cation efflux pump FieF VCD_001678 IPR027469 Cation efflux transmembrane domain superfamily VCD_001679 IPR035966 Phosphofructokinase superfamily VCD_001679 IPR000023 Phosphofructokinase domain VCD_001679 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic VCD_001679 IPR022953 ATP-dependent 6-phosphofructokinase VCD_001679 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type VCD_001679 IPR015912 Phosphofructokinase, conserved site VCD_001680 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase VCD_001681 IPR009252 Cell division protein ZapB VCD_001682 IPR004620 5,10-methylenetetrahydrofolate reductase VCD_001682 IPR029041 FAD-linked oxidoreductase-like VCD_001682 IPR003171 Methylenetetrahydrofolate reductase VCD_001684 IPR036291 NAD(P)-binding domain superfamily VCD_001684 IPR019811 Homoserine dehydrogenase, conserved site VCD_001684 IPR001342 Homoserine dehydrogenase, catalytic VCD_001684 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VCD_001684 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VCD_001684 IPR001341 Aspartate kinase VCD_001684 IPR001048 Aspartate/glutamate/uridylate kinase VCD_001684 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain VCD_001684 IPR018042 Aspartate kinase, conserved site VCD_001684 IPR036393 Acetylglutamate kinase-like superfamily VCD_001685 IPR011821 O-succinylhomoserine (thiol)-lyase VCD_001685 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VCD_001685 IPR015424 Pyridoxal phosphate-dependent transferase VCD_001685 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_001685 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_001686 IPR010985 Ribbon-helix-helix VCD_001686 IPR002084 Methionine repressor MetJ VCD_001686 IPR023453 Methionine repressor MetJ domain superfamily VCD_001687 IPR012301 Malic enzyme, N-terminal domain VCD_001687 IPR015884 Malic enzyme, conserved site VCD_001687 IPR012302 Malic enzyme, NAD-binding VCD_001687 IPR001891 Malic oxidoreductase VCD_001687 IPR036291 NAD(P)-binding domain superfamily VCD_001687 IPR037062 Malic enzyme, N-terminal domain superfamily VCD_001688 IPR034704 L28p-like VCD_001688 IPR002150 Ribosomal protein L31 VCD_001688 IPR027491 Ribosomal protein L31 type A VCD_001688 IPR042105 Ribosomal protein L31 superfamily VCD_001689 IPR041222 Primosomal protein N', 3' DNA-binding domain VCD_001689 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain VCD_001689 IPR041236 Primosomal protein N, C-terminal domain VCD_001689 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily VCD_001689 IPR005259 Primosomal protein N' VCD_001689 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001689 IPR011545 DEAD/DEAH box helicase domain VCD_001689 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_001689 IPR001650 Helicase, C-terminal VCD_001690 IPR028082 Periplasmic binding protein-like I VCD_001690 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_001690 IPR000843 LacI-type HTH domain VCD_001691 IPR036680 Sporulation-like domain superfamily VCD_001691 IPR007730 Sporulation-like domain VCD_001691 IPR011930 Cell division protein FtsN VCD_001692 IPR023333 Proteasome B-type subunit VCD_001692 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_001692 IPR001353 Proteasome, subunit alpha/beta VCD_001692 IPR022281 ATP-dependent protease, HslV subunit VCD_001693 IPR003593 AAA+ ATPase domain VCD_001693 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001693 IPR004491 Heat shock protein HslU VCD_001693 IPR019489 Clp ATPase, C-terminal VCD_001693 IPR003959 ATPase, AAA-type, core VCD_001694 IPR026046 UbiA prenyltransferase domain containing protein 1 VCD_001694 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase VCD_001694 IPR000537 UbiA prenyltransferase family VCD_001695 IPR010203 Regulator of ribonuclease activity A VCD_001695 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VCD_001695 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VCD_001695 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria VCD_001697 IPR035990 Triosephosphate isomerase superfamily VCD_001697 IPR013785 Aldolase-type TIM barrel VCD_001697 IPR000652 Triosephosphate isomerase VCD_001697 IPR020861 Triosephosphate isomerase, active site VCD_001697 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic VCD_001701 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001701 IPR014036 DeoR C-terminal sensor domain VCD_001701 IPR001034 DeoR-type HTH domain VCD_001701 IPR037171 NagB/RpiA transferase-like VCD_001701 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VCD_001701 IPR036390 Winged helix DNA-binding domain superfamily VCD_001702 IPR018369 Chaperonin GroES, conserved site VCD_001702 IPR020818 GroES chaperonin family VCD_001702 IPR037124 GroES chaperonin superfamily VCD_001702 IPR011032 GroES-like superfamily VCD_001703 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VCD_001703 IPR001844 Chaperonin Cpn60 VCD_001703 IPR027409 GroEL-like apical domain superfamily VCD_001703 IPR018370 Chaperonin Cpn60, conserved site VCD_001703 IPR027413 GroEL-like equatorial domain superfamily VCD_001703 IPR002423 Chaperonin Cpn60/TCP-1 family VCD_001705 IPR007197 Radical SAM VCD_001705 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VCD_001705 IPR022462 Lysine-2,3-aminomutase-like VCD_001705 IPR013785 Aldolase-type TIM barrel VCD_001706 IPR008991 Translation protein SH3-like domain superfamily VCD_001706 IPR011768 Translation elongation factor P VCD_001706 IPR013852 Translation elongation factor P/YeiP, conserved site VCD_001706 IPR001059 Translation elongation factor P/YeiP, central VCD_001706 IPR013185 Translation elongation factor, KOW-like VCD_001706 IPR015365 Elongation factor P, C-terminal VCD_001706 IPR012340 Nucleic acid-binding, OB-fold VCD_001706 IPR014722 Ribosomal protein L2, domain 2 VCD_001706 IPR020599 Translation elongation factor P/YeiP VCD_001707 IPR003418 Fumarate reductase, subunit D VCD_001707 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VCD_001708 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VCD_001708 IPR003510 Fumarate reductase, subunit C VCD_001709 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VCD_001709 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_001709 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VCD_001709 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VCD_001709 IPR036010 2Fe-2S ferredoxin-like superfamily VCD_001709 IPR012675 Beta-grasp domain superfamily VCD_001709 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_001709 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VCD_001709 IPR009051 Alpha-helical ferredoxin VCD_001710 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VCD_001710 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VCD_001710 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VCD_001710 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VCD_001710 IPR005884 Fumarate reductase, flavoprotein subunit VCD_001710 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VCD_001710 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VCD_001710 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001711 IPR004525 Elongation factor P--(R)-beta-lysine ligase VCD_001711 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal VCD_001711 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VCD_001711 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_001712 IPR036873 Rhodanese-like domain superfamily VCD_001712 IPR001763 Rhodanese-like domain VCD_001713 IPR003708 Bacterial protein export chaperone SecB VCD_001713 IPR035958 SecB-like superfamily VCD_001714 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal VCD_001714 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent VCD_001714 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VCD_001714 IPR036291 NAD(P)-binding domain superfamily VCD_001714 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_001714 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal VCD_001715 IPR005881 Serine O-acetyltransferase VCD_001715 IPR042122 Serine acetyltransferase, N-terminal domain superfamily VCD_001715 IPR010493 Serine acetyltransferase, N-terminal VCD_001715 IPR001451 Hexapeptide repeat VCD_001715 IPR011004 Trimeric LpxA-like superfamily VCD_001715 IPR018357 Hexapeptide transferase, conserved site VCD_001717 IPR033129 Phosphoenolpyruvate carboxylase, His active site VCD_001717 IPR021135 Phosphoenolpyruvate carboxylase VCD_001717 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type VCD_001717 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site VCD_001717 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_001718 IPR011650 Peptidase M20, dimerisation domain VCD_001718 IPR002933 Peptidase M20 VCD_001718 IPR036264 Bacterial exopeptidase dimerisation domain VCD_001718 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VCD_001718 IPR010169 Acetylornithine deacetylase ArgE VCD_001719 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VCD_001719 IPR000534 Semialdehyde dehydrogenase, NAD-binding VCD_001719 IPR036291 NAD(P)-binding domain superfamily VCD_001719 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 VCD_001719 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site VCD_001720 IPR004662 Acetylglutamate kinase family VCD_001720 IPR037528 Acetylglutamate kinase ArgB VCD_001720 IPR001048 Aspartate/glutamate/uridylate kinase VCD_001720 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic VCD_001720 IPR036393 Acetylglutamate kinase-like superfamily VCD_001721 IPR023434 Argininosuccinate synthase, type 1 subfamily VCD_001721 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001721 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body VCD_001721 IPR001518 Argininosuccinate synthase VCD_001721 IPR018223 Argininosuccinate synthase, conserved site VCD_001723 IPR022761 Fumarate lyase, N-terminal VCD_001723 IPR000362 Fumarate lyase family VCD_001723 IPR020557 Fumarate lyase, conserved site VCD_001723 IPR024083 Fumarase/histidase, N-terminal VCD_001723 IPR009049 Argininosuccinate lyase VCD_001723 IPR029419 Argininosuccinate lyase, C-terminal VCD_001723 IPR008948 L-Aspartase-like VCD_001725 IPR006258 Dihydrolipoamide dehydrogenase VCD_001725 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001725 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VCD_001725 IPR023753 FAD/NAD(P)-binding domain VCD_001725 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCD_001725 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VCD_001725 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VCD_001726 IPR011906 Glutaredoxin domain VCD_001726 IPR002109 Glutaredoxin VCD_001726 IPR011767 Glutaredoxin active site VCD_001726 IPR014025 Glutaredoxin subgroup VCD_001726 IPR037944 Peroxiredoxin-5-like VCD_001726 IPR013740 Redoxin VCD_001726 IPR036249 Thioredoxin-like superfamily VCD_001727 IPR036390 Winged helix DNA-binding domain superfamily VCD_001727 IPR005119 LysR, substrate-binding VCD_001727 IPR000847 Transcription regulator HTH, LysR VCD_001727 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001728 IPR001460 Penicillin-binding protein, transpeptidase VCD_001728 IPR036950 Penicillin binding protein transglycosylase domain VCD_001728 IPR012338 Beta-lactamase/transpeptidase-like VCD_001728 IPR001264 Glycosyl transferase, family 51 VCD_001728 IPR023346 Lysozyme-like domain superfamily VCD_001728 IPR031376 Penicillin-binding protein, OB-like domain VCD_001733 IPR011662 Secretin/TonB, short N-terminal domain VCD_001733 IPR013355 Type IV pilus secretin PilQ VCD_001733 IPR004845 Type II secretion system GspD, conserved site VCD_001733 IPR004846 Type II/III secretion system VCD_001733 IPR021731 AMIN domain VCD_001733 IPR005644 NolW-like VCD_001733 IPR001775 GspD/PilQ family VCD_001733 IPR038591 NolW-like superfamily VCD_001734 IPR000623 Shikimate kinase/Threonine synthase-like 1 VCD_001734 IPR031322 Shikimate kinase/gluconokinase VCD_001734 IPR023000 Shikimate kinase, conserved site VCD_001734 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001735 IPR016037 3-dehydroquinate synthase AroB VCD_001735 IPR030963 3-dehydroquinate synthase family VCD_001735 IPR030960 3-dehydroquinate synthase domain VCD_001737 IPR012263 Adenine modification methylase, M.EcoRV-type VCD_001737 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_001737 IPR012327 D12 class N6 adenine-specific DNA methyltransferase VCD_001737 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001737 IPR023095 Adenine-specific methyltransferase, domain 2 VCD_001738 IPR000056 Ribulose-phosphate 3-epimerase-like VCD_001738 IPR013785 Aldolase-type TIM barrel VCD_001738 IPR011060 Ribulose-phosphate binding barrel VCD_001738 IPR026019 Ribulose-phosphate 3-epimerase VCD_001739 IPR041492 Haloacid dehalogenase-like hydrolase VCD_001739 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VCD_001739 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VCD_001739 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic VCD_001739 IPR036412 HAD-like superfamily VCD_001739 IPR023214 HAD superfamily VCD_001739 IPR037512 Phosphoglycolate phosphatase, prokaryotic VCD_001739 IPR006439 HAD hydrolase, subfamily IA VCD_001740 IPR002306 Tryptophan-tRNA ligase VCD_001740 IPR002305 Aminoacyl-tRNA synthetase, class Ic VCD_001740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001740 IPR024109 Tryptophan-tRNA ligase, bacterial-type VCD_001743 IPR038135 Methylthiotransferase, N-terminal domain superfamily VCD_001743 IPR006638 Elp3/MiaB/NifB VCD_001743 IPR005839 Methylthiotransferase VCD_001743 IPR002792 TRAM domain VCD_001743 IPR023404 Radical SAM, alpha/beta horseshoe VCD_001743 IPR007197 Radical SAM VCD_001743 IPR041582 RimO, TRAM domain VCD_001743 IPR005840 Ribosomal protein S12 methylthiotransferase RimO VCD_001743 IPR013848 Methylthiotransferase, N-terminal VCD_001743 IPR020612 Methylthiotransferase, conserved site VCD_001744 IPR017926 Glutamine amidotransferase VCD_001744 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VCD_001744 IPR029062 Class I glutamine amidotransferase-like VCD_001745 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria VCD_001745 IPR005814 Aminotransferase class-III VCD_001745 IPR015424 Pyridoxal phosphate-dependent transferase VCD_001745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_001745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_001745 IPR004636 Acetylornithine/Succinylornithine transaminase family VCD_001746 IPR016181 Acyl-CoA N-acyltransferase VCD_001746 IPR007041 Arginine N-succinyltransferase AstA/AruG VCD_001746 IPR017650 Arginine N-succinyltransferase VCD_001747 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VCD_001747 IPR016160 Aldehyde dehydrogenase, cysteine active site VCD_001747 IPR017649 Succinylglutamate-semialdehyde dehydrogenase VCD_001747 IPR015590 Aldehyde dehydrogenase domain VCD_001747 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_001747 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_001747 IPR016161 Aldehyde/histidinol dehydrogenase VCD_001749 IPR036390 Winged helix DNA-binding domain superfamily VCD_001749 IPR018335 Transcription regulator HTH, Crp-type, conserved site VCD_001749 IPR014710 RmlC-like jelly roll fold VCD_001749 IPR012318 Crp-type HTH domain VCD_001749 IPR000595 Cyclic nucleotide-binding domain VCD_001749 IPR018488 Cyclic nucleotide-binding, conserved site VCD_001749 IPR018490 Cyclic nucleotide-binding-like VCD_001749 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001750 IPR006083 Phosphoribulokinase/uridine kinase VCD_001750 IPR006082 Phosphoribulokinase VCD_001750 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001751 IPR010648 Uncharacterised protein family UPF0270 VCD_001751 IPR036685 YehU-like superfamily VCD_001753 IPR012020 AB hydrolase 4 family VCD_001753 IPR000952 AB hydrolase 4, conserved site VCD_001753 IPR000073 Alpha/beta hydrolase fold-1 VCD_001753 IPR029058 Alpha/Beta hydrolase fold VCD_001755 IPR003593 AAA+ ATPase domain VCD_001755 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001755 IPR017871 ABC transporter, conserved site VCD_001755 IPR003439 ABC transporter-like VCD_001755 IPR032781 ABC-transporter extension domain VCD_001756 IPR003680 Flavodoxin-like fold VCD_001756 IPR029039 Flavoprotein-like superfamily VCD_001756 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG VCD_001757 IPR004771 K+/H+ exchanger VCD_001757 IPR020884 Glutathione-regulated potassium-efflux system protein KefB VCD_001757 IPR038770 Sodium/solute symporter superfamily VCD_001757 IPR006153 Cation/H+ exchanger VCD_001757 IPR003148 Regulator of K+ conductance, N-terminal VCD_001757 IPR036291 NAD(P)-binding domain superfamily VCD_001759 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VCD_001760 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_001760 IPR000246 Peptidase T2, asparaginase 2 VCD_001761 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001761 IPR001114 Adenylosuccinate synthetase VCD_001761 IPR042110 Adenylosuccinate synthetase, domain 2 VCD_001761 IPR042109 Adenylosuccinate synthetase, domain 1 VCD_001761 IPR042111 Adenylosuccinate synthetase, domain 3 VCD_001761 IPR018220 Adenylosuccinate synthase, GTP-binding site VCD_001761 IPR033128 Adenylosuccinate synthase, active site VCD_001762 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_001762 IPR006597 Sel1-like repeat VCD_001763 IPR000917 Sulfatase, N-terminal VCD_001763 IPR017850 Alkaline-phosphatase-like, core domain superfamily VCD_001763 IPR024588 Inner membrane protein YejM, N-terminal VCD_001763 IPR012159 Inner membrane protein YejM VCD_001764 IPR011805 Ribonuclease R VCD_001764 IPR004476 Ribonuclease II/ribonuclease R VCD_001764 IPR022966 Ribonuclease II/R, conserved site VCD_001764 IPR001900 Ribonuclease II/R VCD_001764 IPR013223 Ribonuclease B, N-terminal OB domain VCD_001764 IPR013668 Ribonuclease R winged-helix domain VCD_001764 IPR040476 RNase II/RNase R, cold shock domain VCD_001764 IPR011129 Cold shock domain VCD_001764 IPR022967 RNA-binding domain, S1 VCD_001764 IPR003029 S1 domain VCD_001764 IPR012340 Nucleic acid-binding, OB-fold VCD_001765 IPR004441 RNA methyltransferase TrmH family VCD_001765 IPR001537 tRNA/rRNA methyltransferase, SpoU type VCD_001765 IPR029028 Alpha/beta knot methyltransferases VCD_001765 IPR029064 50S ribosomal protein L30e-like VCD_001765 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCD_001765 IPR013123 RNA 2-O ribose methyltransferase, substrate binding VCD_001765 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VCD_001766 IPR036838 Ribosomal protein S10 domain superfamily VCD_001766 IPR027486 Ribosomal protein S10 domain VCD_001766 IPR018268 Ribosomal protein S10, conserved site VCD_001766 IPR001848 Ribosomal protein S10 VCD_001767 IPR019927 Ribosomal protein L3, bacterial/organelle-type VCD_001767 IPR019926 Ribosomal protein L3, conserved site VCD_001767 IPR009000 Translation protein, beta-barrel domain superfamily VCD_001767 IPR000597 Ribosomal protein L3 VCD_001768 IPR013005 50S ribosomal protein uL4 VCD_001768 IPR023574 Ribosomal protein L4 domain superfamily VCD_001768 IPR002136 Ribosomal protein L4/L1e VCD_001769 IPR013025 Ribosomal protein L25/L23 VCD_001769 IPR001014 Ribosomal protein L23/L25, conserved site VCD_001769 IPR012678 Ribosomal protein L23/L15e core domain superfamily VCD_001769 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VCD_001770 IPR012340 Nucleic acid-binding, OB-fold VCD_001770 IPR022669 Ribosomal protein L2, C-terminal VCD_001770 IPR014722 Ribosomal protein L2, domain 2 VCD_001770 IPR002171 Ribosomal protein L2 VCD_001770 IPR005880 Ribosomal protein L2, bacterial/organellar-type VCD_001770 IPR022671 Ribosomal protein L2, conserved site VCD_001770 IPR014726 Ribosomal protein L2, domain 3 VCD_001770 IPR022666 Ribosomal Proteins L2, RNA binding domain VCD_001770 IPR008991 Translation protein SH3-like domain superfamily VCD_001771 IPR002222 Ribosomal protein S19/S15 VCD_001771 IPR023575 Ribosomal protein S19, superfamily VCD_001771 IPR005732 Ribosomal protein S19, bacterial-type VCD_001771 IPR020934 Ribosomal protein S19 conserved site VCD_001772 IPR001063 Ribosomal protein L22/L17 VCD_001772 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type VCD_001772 IPR018260 Ribosomal protein L22/L17, conserved site VCD_001772 IPR036394 Ribosomal protein L22/L17 superfamily VCD_001773 IPR004087 K Homology domain VCD_001773 IPR015946 K homology domain-like, alpha/beta VCD_001773 IPR018280 Ribosomal protein S3, conserved site VCD_001773 IPR036419 Ribosomal protein S3, C-terminal domain superfamily VCD_001773 IPR005704 Ribosomal protein S3, bacterial-type VCD_001773 IPR004044 K Homology domain, type 2 VCD_001773 IPR001351 Ribosomal protein S3, C-terminal VCD_001773 IPR009019 K homology domain superfamily, prokaryotic type VCD_001774 IPR000114 Ribosomal protein L16 VCD_001774 IPR020798 Ribosomal protein L16, conserved site VCD_001774 IPR036920 Ribosomal protein L10e/L16 superfamily VCD_001774 IPR016180 Ribosomal protein L10e/L16 VCD_001775 IPR018254 Ribosomal protein L29, conserved site VCD_001775 IPR001854 Ribosomal protein L29/L35 VCD_001775 IPR036049 Ribosomal protein L29/L35 superfamily VCD_001776 IPR019979 Ribosomal protein S17, conserved site VCD_001776 IPR000266 Ribosomal protein S17/S11 VCD_001776 IPR019984 30S ribosomal protein S17 VCD_001776 IPR012340 Nucleic acid-binding, OB-fold VCD_001777 IPR000218 Ribosomal protein L14P VCD_001777 IPR005745 Ribosomal protein L14P, bacterial-type VCD_001777 IPR036853 Ribosomal protein L14 superfamily VCD_001777 IPR019972 Ribosomal protein L14P, conserved site VCD_001778 IPR003256 Ribosomal protein L24 VCD_001778 IPR008991 Translation protein SH3-like domain superfamily VCD_001778 IPR005824 KOW VCD_001778 IPR041988 Ribosomal Protein L26/L24, KOW domain VCD_001778 IPR014722 Ribosomal protein L2, domain 2 VCD_001778 IPR005825 Ribosomal protein L24/L26, conserved site VCD_001779 IPR020929 Ribosomal protein L5, conserved site VCD_001779 IPR031309 Ribosomal protein L5, C-terminal VCD_001779 IPR002132 Ribosomal protein L5 VCD_001779 IPR031310 Ribosomal protein L5, N-terminal VCD_001779 IPR022803 Ribosomal protein L5 domain superfamily VCD_001779 IPR020930 Ribosomal protein L5, bacterial-type VCD_001780 IPR001209 Ribosomal protein S14 VCD_001780 IPR023036 Ribosomal protein S14, bacterial/plastid VCD_001780 IPR018271 Ribosomal protein S14, conserved site VCD_001781 IPR000630 Ribosomal protein S8 VCD_001781 IPR035987 Ribosomal protein S8 superfamily VCD_001782 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily VCD_001782 IPR019906 Ribosomal protein L6, bacterial-type VCD_001782 IPR020040 Ribosomal protein L6, alpha-beta domain VCD_001782 IPR002358 Ribosomal protein L6, conserved site VCD_001782 IPR000702 Ribosomal protein L6 VCD_001783 IPR005484 Ribosomal protein L18 VCD_001783 IPR004389 Ribosomal protein L18, bacterial-type VCD_001784 IPR000851 Ribosomal protein S5 VCD_001784 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001784 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001784 IPR005324 Ribosomal protein S5, C-terminal VCD_001784 IPR013810 Ribosomal protein S5, N-terminal VCD_001784 IPR018192 Ribosomal protein S5, N-terminal, conserved site VCD_001784 IPR005712 Ribosomal protein S5, bacterial-type VCD_001785 IPR005996 Ribosomal protein L30, bacterial-type VCD_001785 IPR018038 Ribosomal protein L30, conserved site VCD_001785 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VCD_001785 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VCD_001786 IPR030878 Ribosomal protein L15 VCD_001786 IPR005749 Ribosomal protein L15, bacterial-type VCD_001786 IPR001196 Ribosomal protein L15, conserved site VCD_001786 IPR036227 Ribosomal L18e/L15P superfamily VCD_001786 IPR021131 Ribosomal protein L18e/L15P VCD_001787 IPR023201 SecY domain superfamily VCD_001787 IPR030659 SecY conserved site VCD_001787 IPR002208 SecY/SEC61-alpha family VCD_001787 IPR026593 Protein translocase subunit SecY VCD_001788 IPR035977 Ribosomal protein L36 superfamily VCD_001788 IPR000473 Ribosomal protein L36 VCD_001789 IPR027437 30s ribosomal protein S13, C-terminal VCD_001789 IPR001892 Ribosomal protein S13 VCD_001789 IPR019980 Ribosomal protein S13, bacterial-type VCD_001789 IPR018269 Ribosomal protein S13, conserved site VCD_001789 IPR010979 Ribosomal protein S13-like, H2TH VCD_001790 IPR019981 Ribosomal protein S11, bacterial-type VCD_001790 IPR018102 Ribosomal S11, conserved site VCD_001790 IPR001971 Ribosomal protein S11 VCD_001790 IPR036967 Ribosomal protein S11 superfamily VCD_001791 IPR005709 Ribosomal protein S4, bacterial-type VCD_001791 IPR002942 RNA-binding S4 domain VCD_001791 IPR036986 RNA-binding S4 domain superfamily VCD_001791 IPR001912 Ribosomal protein S4/S9, N-terminal VCD_001791 IPR018079 Ribosomal protein S4, conserved site VCD_001791 IPR022801 Ribosomal protein S4/S9 VCD_001792 IPR036643 DNA-directed RNA polymerase, insert domain superfamily VCD_001792 IPR011260 RNA polymerase, alpha subunit, C-terminal VCD_001792 IPR036603 RNA polymerase, RBP11-like subunit VCD_001792 IPR011773 DNA-directed RNA polymerase, alpha subunit VCD_001792 IPR011262 DNA-directed RNA polymerase, insert domain VCD_001792 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type VCD_001793 IPR000456 Ribosomal protein L17 VCD_001793 IPR036373 Ribosomal protein L17 superfamily VCD_001795 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VCD_001795 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VCD_001795 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VCD_001796 IPR013731 Opacity-associated protein A, N-terminal VCD_001796 IPR007340 Opacity-associated protein A VCD_001797 IPR000620 EamA domain VCD_001798 IPR016181 Acyl-CoA N-acyltransferase VCD_001798 IPR000182 GNAT domain VCD_001799 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_001799 IPR028619 ATP-dependent RNA helicase DbpA VCD_001799 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001799 IPR011545 DEAD/DEAH box helicase domain VCD_001799 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VCD_001799 IPR001650 Helicase, C-terminal VCD_001799 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_001799 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VCD_001799 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_001801 IPR029052 Metallo-dependent phosphatase-like VCD_001801 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase VCD_001801 IPR041827 CpdB, N-terminal metallophosphatase domain VCD_001801 IPR008334 5'-Nucleotidase, C-terminal VCD_001801 IPR006179 5'-Nucleotidase/apyrase VCD_001801 IPR006146 5'-Nucleotidase, conserved site VCD_001801 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VCD_001801 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VCD_001802 IPR037115 Sirohaem synthase, dimerisation domain superfamily VCD_001802 IPR036291 NAD(P)-binding domain superfamily VCD_001802 IPR028281 Siroheme synthase, central domain VCD_001802 IPR019478 Sirohaem synthase, dimerisation domain VCD_001802 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VCD_001802 IPR006366 Uroporphyrin-III C-methyltransferase VCD_001802 IPR006367 Sirohaem synthase, N-terminal VCD_001802 IPR035996 Tetrapyrrole methylase superfamily VCD_001802 IPR014777 Tetrapyrrole methylase, subdomain 1 VCD_001802 IPR014776 Tetrapyrrole methylase, subdomain 2 VCD_001802 IPR012409 Sirohaem synthase VCD_001802 IPR000878 Tetrapyrrole methylase VCD_001803 IPR002500 Phosphoadenosine phosphosulphate reductase VCD_001803 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001803 IPR011784 Sulphate adenylyltransferase, small subunit VCD_001804 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VCD_001804 IPR011779 Sulphate adenylyltransferase, large subunit VCD_001804 IPR005225 Small GTP-binding protein domain VCD_001804 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001804 IPR031157 Tr-type G domain, conserved site VCD_001804 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain VCD_001804 IPR009000 Translation protein, beta-barrel domain superfamily VCD_001804 IPR000795 Transcription factor, GTP-binding domain VCD_001805 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001805 IPR002891 Adenylyl-sulfate kinase VCD_001809 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001809 IPR017871 ABC transporter, conserved site VCD_001809 IPR003439 ABC transporter-like VCD_001809 IPR003593 AAA+ ATPase domain VCD_001811 IPR019731 Protein of unknown function DUF2607 VCD_001812 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VCD_001813 IPR002569 Peptide methionine sulphoxide reductase MsrA VCD_001813 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily VCD_001814 IPR035243 TamA, POTRA domain 1 VCD_001814 IPR034746 POTRA domain VCD_001814 IPR010827 POTRA domain, BamA/TamA-like VCD_001814 IPR000184 Bacterial surface antigen (D15) VCD_001814 IPR039910 Surface antigen D15-like VCD_001815 IPR007452 Translocation and assembly module TamB VCD_001816 IPR039126 Gamma-glutamylaminecyclotransferase VCD_001816 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VCD_001816 IPR013024 Gamma-glutamyl cyclotransferase-like VCD_001816 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VCD_001817 IPR036649 Inorganic pyrophosphatase superfamily VCD_001817 IPR008162 Inorganic pyrophosphatase VCD_001818 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal VCD_001818 IPR000146 Fructose-1,6-bisphosphatase class 1 VCD_001818 IPR020548 Fructose-1,6-bisphosphatase, active site VCD_001818 IPR028343 Fructose-1,6-bisphosphatase VCD_001819 IPR000713 Mur ligase, N-terminal catalytic domain VCD_001819 IPR013221 Mur ligase, central VCD_001819 IPR036615 Mur ligase, C-terminal domain superfamily VCD_001819 IPR004101 Mur ligase, C-terminal VCD_001819 IPR036565 Mur-like, catalytic domain superfamily VCD_001819 IPR005757 Murein peptide ligase VCD_001820 IPR004507 Flavin prenyltransferase UbiX-like VCD_001820 IPR003382 Flavoprotein VCD_001820 IPR036551 Flavin prenyltransferase-like VCD_001821 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter VCD_001821 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria VCD_001821 IPR006061 Solute-binding family 1, conserved site VCD_001822 IPR005947 Thiamine ABC transporter, permease protein VCD_001822 IPR035906 MetI-like superfamily VCD_001822 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_001823 IPR003593 AAA+ ATPase domain VCD_001823 IPR017871 ABC transporter, conserved site VCD_001823 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001823 IPR003439 ABC transporter-like VCD_001823 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ VCD_001824 IPR023153 PSPTO4464-like domain superfamily VCD_001824 IPR006839 Ribosome-associated, YjgA VCD_001825 IPR035068 Metalloprotease TldD/PmbA, N-terminal VCD_001825 IPR002510 Metalloprotease TldD/PmbA VCD_001825 IPR036059 Metalloprotease TldD/PmbA superfamily VCD_001826 IPR000644 CBS domain VCD_001826 IPR006668 Magnesium transporter, MgtE intracellular domain VCD_001826 IPR038076 MgtE, N-terminal domain superfamily VCD_001826 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VCD_001826 IPR006667 SLC41 divalent cation transporters, integral membrane domain VCD_001826 IPR038048 Magnesium transporter MgtE, transmembrane domain VCD_001826 IPR006669 Magnesium transporter MgtE VCD_001827 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VCD_001827 IPR000032 Phosphocarrier protein HPr-like VCD_001827 IPR035895 HPr-like superfamily VCD_001827 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VCD_001828 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001828 IPR005337 RapZ-like family VCD_001829 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN VCD_001829 IPR016152 Phosphotransferase/anion transporter VCD_001829 IPR002178 PTS EIIA type-2 domain VCD_001830 IPR036567 Ribosome hibernation promotion factor-like VCD_001830 IPR003489 Ribosome hibernation promoting factor/RaiA VCD_001831 IPR000394 RNA polymerase sigma factor 54 VCD_001831 IPR007046 RNA polymerase sigma factor 54, core-binding domain VCD_001831 IPR007634 RNA polymerase sigma factor 54, DNA-binding VCD_001831 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VCD_001832 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001832 IPR030921 LPS export ABC transporter, ATP-binding protein LptB VCD_001832 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VCD_001832 IPR017871 ABC transporter, conserved site VCD_001832 IPR003439 ABC transporter-like VCD_001832 IPR003593 AAA+ ATPase domain VCD_001833 IPR014340 Lipopolysaccharide export system protein LptA VCD_001833 IPR005653 Organic solvent tolerance-like, N-terminal VCD_001835 IPR010023 KdsC family VCD_001835 IPR036412 HAD-like superfamily VCD_001835 IPR023214 HAD superfamily VCD_001836 IPR035474 KpsF-like, SIS domain VCD_001836 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type VCD_001836 IPR000644 CBS domain VCD_001836 IPR001347 Sugar isomerase (SIS) VCD_001837 IPR004481 Sodium/potassium/calcium exchanger VCD_001837 IPR004837 Sodium/calcium exchanger membrane region VCD_001838 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl VCD_001838 IPR017871 ABC transporter, conserved site VCD_001838 IPR003439 ABC transporter-like VCD_001838 IPR003593 AAA+ ATPase domain VCD_001838 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001839 IPR030802 ABC transporter permease MalE VCD_001839 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VCD_001840 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD VCD_001840 IPR003399 Mce/MlaD VCD_001841 IPR042245 Tgt2/MlaC superfamily VCD_001841 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VCD_001843 IPR002634 BolA protein VCD_001843 IPR036065 BolA-like superfamily VCD_001844 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VCD_001844 IPR036968 Enolpyruvate transferase domain superfamily VCD_001844 IPR001986 Enolpyruvate transferase domain VCD_001844 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase VCD_001845 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase VCD_001845 IPR002123 Phospholipid/glycerol acyltransferase VCD_001846 IPR019897 RidA, conserved site VCD_001846 IPR006175 YjgF/YER057c/UK114 family VCD_001846 IPR006056 RidA family VCD_001846 IPR035959 RutC-like superfamily VCD_001847 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VCD_001847 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VCD_001847 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VCD_001847 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VCD_001847 IPR002801 Aspartate transcarbamylase regulatory subunit VCD_001848 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily VCD_001848 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VCD_001848 IPR002082 Aspartate carbamoyltransferase VCD_001848 IPR006130 Aspartate/ornithine carbamoyltransferase VCD_001848 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VCD_001849 IPR002292 Ornithine/putrescine carbamoyltransferase VCD_001849 IPR024904 Ornithine carbamoyltransferase VCD_001849 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VCD_001849 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily VCD_001849 IPR006130 Aspartate/ornithine carbamoyltransferase VCD_001849 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VCD_001850 IPR029060 PIN-like domain superfamily VCD_001850 IPR003714 PhoH-like protein VCD_001850 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001850 IPR002716 PIN domain VCD_001851 IPR000330 SNF2-related, N-terminal domain VCD_001851 IPR040765 RapA, N-terminal Tudor like domain 1 VCD_001851 IPR038718 SNF2-like, N-terminal domain superfamily VCD_001851 IPR022737 RNA polymerase recycling, bacterial, C-terminal VCD_001851 IPR001650 Helicase, C-terminal VCD_001851 IPR023949 RNA polymerase-associated protein RapA VCD_001851 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001851 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_001851 IPR040766 RapA, N-terminal Tudor-like domain 2 VCD_001852 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_001852 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VCD_001852 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_001853 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCD_001853 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCD_001853 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VCD_001853 IPR036291 NAD(P)-binding domain superfamily VCD_001854 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VCD_001854 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm VCD_001854 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_001854 IPR002300 Aminoacyl-tRNA synthetase, class Ia VCD_001854 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001854 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VCD_001854 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VCD_001854 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VCD_001854 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily VCD_001854 IPR002303 Valine-tRNA ligase VCD_001854 IPR033705 Valyl tRNA synthetase, anticodon-binding domain VCD_001855 IPR007459 DNA polymerase III chi subunit, HolC VCD_001855 IPR036768 DNA polymerase III subunit chi superfamily VCD_001856 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B VCD_001856 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal VCD_001856 IPR023042 Peptidase M17, leucine aminopeptidase VCD_001856 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VCD_001857 IPR005495 Permease LptG/LptF-related VCD_001857 IPR030922 LPS export ABC transporter permease LptF VCD_001858 IPR030923 LPS export ABC transporter permease LptG VCD_001858 IPR005495 Permease LptG/LptF-related VCD_001860 IPR001789 Signal transduction response regulator, receiver domain VCD_001860 IPR003607 HD/PDEase domain VCD_001860 IPR037522 HD-GYP domain VCD_001860 IPR011006 CheY-like superfamily VCD_001863 IPR033940 3-isopropylmalate dehydratase, swivel domain VCD_001863 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain VCD_001863 IPR004431 3-isopropylmalate dehydratase, small subunit VCD_001863 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCD_001864 IPR018136 Aconitase family, 4Fe-4S cluster binding site VCD_001864 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VCD_001864 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VCD_001864 IPR033941 3-Isopropylmalate dehydratase, catalytic domain VCD_001864 IPR004430 3-isopropylmalate dehydratase, large subunit VCD_001864 IPR036008 Aconitase, iron-sulfur domain VCD_001865 IPR024084 Isopropylmalate dehydrogenase-like domain VCD_001865 IPR004429 Isopropylmalate dehydrogenase VCD_001865 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site VCD_001866 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain VCD_001866 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site VCD_001866 IPR000891 Pyruvate carboxyltransferase VCD_001866 IPR013785 Aldolase-type TIM barrel VCD_001866 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily VCD_001866 IPR005671 2-isopropylmalate synthase, bacterial-type VCD_001868 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VCD_001868 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VCD_001871 IPR036390 Winged helix DNA-binding domain superfamily VCD_001871 IPR000847 Transcription regulator HTH, LysR VCD_001871 IPR005119 LysR, substrate-binding VCD_001871 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001872 IPR042099 AMP-dependent synthetase-like superfamily VCD_001872 IPR000873 AMP-dependent synthetase/ligase VCD_001872 IPR020845 AMP-binding, conserved site VCD_001873 IPR029035 DHS-like NAD/FAD-binding domain superfamily VCD_001873 IPR012846 Acetolactate synthase, large subunit, biosynthetic VCD_001873 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VCD_001873 IPR000399 TPP-binding enzyme, conserved site VCD_001873 IPR029061 Thiamin diphosphate-binding fold VCD_001873 IPR039368 Acetolactate synthase large subunit, TPP binding domain VCD_001873 IPR012000 Thiamine pyrophosphate enzyme, central domain VCD_001873 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VCD_001874 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VCD_001874 IPR004789 Acetolactate synthase, small subunit VCD_001874 IPR039557 AHAS, ACT domain VCD_001874 IPR002912 ACT domain VCD_001874 IPR019455 Acetolactate synthase, small subunit, C-terminal VCD_001875 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCD_001875 IPR002912 ACT domain VCD_001875 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VCD_001875 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VCD_001875 IPR036291 NAD(P)-binding domain superfamily VCD_001875 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCD_001876 IPR037171 NagB/RpiA transferase-like VCD_001876 IPR004788 Ribose 5-phosphate isomerase, type A VCD_001876 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup VCD_001877 IPR037171 NagB/RpiA transferase-like VCD_001877 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VCD_001877 IPR002698 5-formyltetrahydrofolate cyclo-ligase VCD_001878 IPR007838 Cell division protein ZapA-like VCD_001878 IPR023771 Cell division protein ZapA, eubacteria VCD_001878 IPR036192 Cell division protein ZapA-like superfamily VCD_001879 IPR011978 Uncharacterised protein family UPF0149 VCD_001879 IPR036255 YgfB-like superfamily VCD_001880 IPR002938 FAD-binding domain VCD_001880 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase VCD_001880 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001880 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VCD_001880 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VCD_001881 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VCD_001881 IPR002938 FAD-binding domain VCD_001881 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001881 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VCD_001883 IPR017703 YgfZ/GcvT conserved site VCD_001883 IPR023758 tRNA-modifying protein YgfZ VCD_001883 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VCD_001884 IPR005631 Flavinator of succinate dehydrogenase VCD_001884 IPR036714 Flavinator of succinate dehydrogenase superfamily VCD_001886 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001886 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VCD_001886 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VCD_001886 IPR005288 L-aspartate oxidase VCD_001886 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VCD_001886 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VCD_001887 IPR039425 RNA polymerase sigma-70 like VCD_001887 IPR014284 RNA polymerase sigma-70 like domain VCD_001887 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site VCD_001887 IPR007627 RNA polymerase sigma-70 region 2 VCD_001887 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VCD_001887 IPR013325 RNA polymerase sigma factor, region 2 VCD_001887 IPR013324 RNA polymerase sigma factor, region 3/4-like VCD_001887 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001887 IPR014286 RNA polymerase sigma-70 RpoE type VCD_001888 IPR005573 Anti sigma-E protein RseA, C-terminal VCD_001888 IPR005572 Anti sigma-E protein RseA, N-terminal VCD_001888 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily VCD_001888 IPR026279 Sigma-E factor negative regulatory protein RseA VCD_001889 IPR038484 MucB/RseB, C-terminal domain superfamily VCD_001889 IPR005588 MucB/RseB VCD_001889 IPR033434 MucB/RseB, N-terminal VCD_001889 IPR033436 MucB/RseB, C-terminal VCD_001890 IPR026268 Protein RseC VCD_001890 IPR007359 Positive regulator of sigma(E), RseC/MucC VCD_001891 IPR009000 Translation protein, beta-barrel domain superfamily VCD_001891 IPR013842 GTP-binding protein LepA, C-terminal VCD_001891 IPR038363 LepA, C-terminal domain superfamily VCD_001891 IPR031157 Tr-type G domain, conserved site VCD_001891 IPR004161 Translation elongation factor EFTu-like, domain 2 VCD_001891 IPR000640 Elongation factor EFG, domain V-like VCD_001891 IPR035647 EF-G domain III/V-like VCD_001891 IPR006297 Elongation factor 4 VCD_001891 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001891 IPR035654 Elongation factor 4, domain IV VCD_001891 IPR005225 Small GTP-binding protein domain VCD_001891 IPR000795 Transcription factor, GTP-binding domain VCD_001892 IPR000223 Peptidase S26A, signal peptidase I VCD_001892 IPR019758 Peptidase S26A, signal peptidase I, conserved site VCD_001892 IPR019757 Peptidase S26A, signal peptidase I, lysine active site VCD_001892 IPR019756 Peptidase S26A, signal peptidase I, serine active site VCD_001892 IPR019533 Peptidase S26 VCD_001892 IPR036286 LexA/Signal peptidase-like superfamily VCD_001893 IPR014720 Double-stranded RNA-binding domain VCD_001893 IPR011907 Ribonuclease III VCD_001893 IPR000999 Ribonuclease III domain VCD_001893 IPR036389 Ribonuclease III, endonuclease domain superfamily VCD_001894 IPR030388 Era-type guanine nucleotide-binding (G) domain VCD_001894 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001894 IPR009019 K homology domain superfamily, prokaryotic type VCD_001894 IPR005225 Small GTP-binding protein domain VCD_001894 IPR005662 GTP-binding protein Era VCD_001894 IPR004044 K Homology domain, type 2 VCD_001894 IPR015946 K homology domain-like, alpha/beta VCD_001894 IPR006073 GTP binding domain VCD_001895 IPR003717 Recombination protein O, RecO VCD_001895 IPR022572 DNA replication/recombination mediator RecO, N-terminal VCD_001895 IPR012340 Nucleic acid-binding, OB-fold VCD_001895 IPR037278 ARFGAP/RecO-like zinc finger VCD_001896 IPR036130 Pyridoxine 5'-phosphate synthase VCD_001896 IPR013785 Aldolase-type TIM barrel VCD_001896 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ VCD_001897 IPR004568 Phosphopantetheine-protein transferase domain VCD_001897 IPR008278 4'-phosphopantetheinyl transferase domain VCD_001897 IPR037143 4'-phosphopantetheinyl transferase domain superfamily VCD_001897 IPR002582 Holo-[acyl carrier protein] synthase VCD_001900 IPR001633 EAL domain VCD_001900 IPR035919 EAL domain superfamily VCD_001900 IPR000160 GGDEF domain VCD_001900 IPR003660 HAMP domain VCD_001900 IPR029787 Nucleotide cyclase VCD_001901 IPR003660 HAMP domain VCD_001901 IPR011006 CheY-like superfamily VCD_001901 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001901 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001901 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_001901 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_001901 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_001901 IPR036641 HPT domain superfamily VCD_001901 IPR019247 Histidine kinase BarA, N-terminal VCD_001901 IPR001789 Signal transduction response regulator, receiver domain VCD_001901 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_001901 IPR005467 Histidine kinase domain VCD_001902 IPR010280 (Uracil-5)-methyltransferase family VCD_001902 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001902 IPR012340 Nucleic acid-binding, OB-fold VCD_001902 IPR030390 RNA methyltransferase TrmA, active site VCD_001902 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD VCD_001902 IPR002792 TRAM domain VCD_001902 IPR030391 RNA methyltransferase TrmA, conserved site VCD_001903 IPR003607 HD/PDEase domain VCD_001903 IPR033655 RelA, TGS domain VCD_001903 IPR012676 TGS-like VCD_001903 IPR004095 TGS VCD_001903 IPR007685 RelA/SpoT VCD_001903 IPR004811 RelA/SpoT family VCD_001903 IPR012675 Beta-grasp domain superfamily VCD_001903 IPR002912 ACT domain VCD_001904 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VCD_001904 IPR011551 NTP pyrophosphohydrolase MazG VCD_001906 IPR017456 CTP synthase, N-terminal VCD_001906 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001906 IPR033828 CTP synthase GATase domain VCD_001906 IPR017926 Glutamine amidotransferase VCD_001906 IPR004468 CTP synthase VCD_001906 IPR029062 Class I glutamine amidotransferase-like VCD_001907 IPR020809 Enolase, conserved site VCD_001907 IPR020811 Enolase, N-terminal VCD_001907 IPR020810 Enolase, C-terminal TIM barrel domain VCD_001907 IPR029017 Enolase-like, N-terminal VCD_001907 IPR036849 Enolase-like, C-terminal domain superfamily VCD_001907 IPR000941 Enolase VCD_001908 IPR002646 Poly A polymerase, head domain VCD_001908 IPR006674 HD domain VCD_001908 IPR003607 HD/PDEase domain VCD_001908 IPR012006 tRNA nucleotidyltransferase, proteobacteria VCD_001908 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VCD_001909 IPR003593 AAA+ ATPase domain VCD_001909 IPR036365 PGBD-like superfamily VCD_001909 IPR036366 PGBD superfamily VCD_001909 IPR002477 Peptidoglycan binding-like VCD_001909 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001911 IPR003646 SH3-like domain, bacterial-type VCD_001911 IPR016476 SH3 domain protein VCD_001912 IPR001204 Phosphate transporter VCD_001914 IPR038078 PhoU-like domain superfamily VCD_001914 IPR002727 Protein of unknown function DUF47 VCD_001914 IPR018445 Putative phosphate transport regulator VCD_001915 IPR007899 CHAD domain VCD_001915 IPR033469 CYTH-like domain superfamily VCD_001915 IPR023577 CYTH domain VCD_001915 IPR039013 Inorganic triphosphatase YgiF VCD_001916 IPR029151 Periplasmic sensor-like domain superfamily VCD_001916 IPR004090 Chemotaxis methyl-accepting receptor VCD_001916 IPR033479 Double Cache domain 1 VCD_001916 IPR003660 HAMP domain VCD_001916 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_001917 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme VCD_001917 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain VCD_001917 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VCD_001918 IPR029056 Ribokinase-like VCD_001918 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_001918 IPR011913 RfaE bifunctional protein, domain I VCD_001918 IPR011611 Carbohydrate kinase PfkB VCD_001918 IPR004821 Cytidyltransferase-like domain VCD_001918 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VCD_001918 IPR011914 RfaE bifunctional protein, domain II VCD_001918 IPR023030 Bifunctional protein HldE VCD_001919 IPR010130 Type I secretion outer membrane protein, TolC VCD_001919 IPR003423 Outer membrane efflux protein VCD_001920 IPR004385 Nucleoside diphosphate pyrophosphatase VCD_001920 IPR020084 NUDIX hydrolase, conserved site VCD_001920 IPR000086 NUDIX hydrolase domain VCD_001920 IPR015797 NUDIX hydrolase-like domain superfamily VCD_001921 IPR009659 Protein of unknown function DUF1249 VCD_001922 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA VCD_001922 IPR029052 Metallo-dependent phosphatase-like VCD_001922 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VCD_001923 IPR029058 Alpha/Beta hydrolase fold VCD_001923 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VCD_001924 IPR001241 DNA topoisomerase, type IIA VCD_001924 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001924 IPR002288 DNA gyrase B subunit, C-terminal VCD_001924 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001924 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001924 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VCD_001924 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal VCD_001924 IPR006171 TOPRIM domain VCD_001924 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative VCD_001924 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VCD_001924 IPR018522 DNA topoisomerase, type IIA, conserved site VCD_001924 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001925 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VCD_001925 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat VCD_001925 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VCD_001925 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VCD_001925 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily VCD_001925 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative VCD_001925 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VCD_001926 IPR013088 Zinc finger, NHR/GATA-type VCD_001926 IPR005584 DNA gyrase inhibitor YacG VCD_001927 IPR009777 Cell division protein ZapD VCD_001927 IPR036268 ZapD domain superfamily VCD_001927 IPR027462 Z ring-associated protein D, C-terminal VCD_001928 IPR001977 Dephospho-CoA kinase VCD_001928 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001929 IPR000045 Prepilin type IV endopeptidase, peptidase domain VCD_001929 IPR014032 Peptidase A24A, prepilin type IV, bacterial VCD_001929 IPR010627 Peptidase A24A, N-terminal VCD_001930 IPR042094 Type II secretion system F domain superfamily VCD_001930 IPR018076 Type II secretion system F domain VCD_001930 IPR001992 Type II secretion system conserved site VCD_001930 IPR003004 GspF/PilC family VCD_001931 IPR013374 ATPase, type IV, pilus assembly, PilB VCD_001931 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001931 IPR001482 Type II/IV secretion system protein VCD_001931 IPR007831 General secretory system II, protein E, N-terminal VCD_001931 IPR042181 Type II secretion system, protein E, N-terminal VCD_001931 IPR037257 General secretory system II, protein E, N-terminal superfamily VCD_001932 IPR001082 Fimbrial protein pilin VCD_001932 IPR012902 Prokaryotic N-terminal methylation site VCD_001933 IPR013785 Aldolase-type TIM barrel VCD_001933 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal VCD_001933 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal VCD_001933 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily VCD_001933 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal VCD_001933 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VCD_001933 IPR004393 Nicotinate-nucleotide pyrophosphorylase VCD_001934 IPR002502 N-acetylmuramoyl-L-alanine amidase domain VCD_001934 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily VCD_001935 IPR001226 Flavodoxin, conserved site VCD_001935 IPR010086 Flavodoxin, long chain VCD_001935 IPR008254 Flavodoxin/nitric oxide synthase VCD_001935 IPR029039 Flavoprotein-like superfamily VCD_001936 IPR023009 Tyrosine recombinase XerC/XerD VCD_001936 IPR011932 Tyrosine recombinase XerD VCD_001936 IPR004107 Integrase, SAM-like, N-terminal VCD_001936 IPR013762 Integrase-like, catalytic domain superfamily VCD_001936 IPR010998 Integrase/recombinase, N-terminal VCD_001936 IPR002104 Integrase, catalytic domain VCD_001936 IPR011010 DNA breaking-rejoining enzyme, catalytic core VCD_001937 IPR036249 Thioredoxin-like superfamily VCD_001937 IPR013766 Thioredoxin domain VCD_001937 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily VCD_001937 IPR012336 Thioredoxin-like fold VCD_001937 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VCD_001937 IPR033954 Disulphide bond isomerase, DsbC/G VCD_001937 IPR017937 Thioredoxin, conserved site VCD_001938 IPR001667 DDH domain VCD_001938 IPR003156 DHHA1 domain VCD_001938 IPR041122 RecJ, OB domain VCD_001938 IPR004610 Bacterial RecJ exonuclease VCD_001938 IPR038763 DHH phosphoesterase superfamily VCD_001939 IPR008334 5'-Nucleotidase, C-terminal VCD_001939 IPR029052 Metallo-dependent phosphatase-like VCD_001939 IPR019931 LPXTG cell wall anchor domain VCD_001939 IPR006179 5'-Nucleotidase/apyrase VCD_001939 IPR041827 CpdB, N-terminal metallophosphatase domain VCD_001939 IPR006146 5'-Nucleotidase, conserved site VCD_001939 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VCD_001939 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VCD_001940 IPR008920 Transcription regulator FadR/GntR, C-terminal VCD_001940 IPR000524 Transcription regulator HTH, GntR VCD_001940 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001940 IPR011711 GntR, C-terminal VCD_001940 IPR036390 Winged helix DNA-binding domain superfamily VCD_001941 IPR005474 Transketolase, N-terminal VCD_001941 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VCD_001941 IPR029061 Thiamin diphosphate-binding fold VCD_001941 IPR041621 Pyruvate dehydrogenase E1 component, middle domain VCD_001941 IPR004660 Pyruvate dehydrogenase E1 component VCD_001941 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal VCD_001942 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VCD_001942 IPR036625 E3-binding domain superfamily VCD_001942 IPR000089 Biotin/lipoyl attachment VCD_001942 IPR004167 Peripheral subunit-binding domain VCD_001942 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex VCD_001942 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VCD_001942 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VCD_001942 IPR011053 Single hybrid motif VCD_001943 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VCD_001943 IPR006258 Dihydrolipoamide dehydrogenase VCD_001943 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VCD_001943 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCD_001943 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VCD_001943 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001943 IPR023753 FAD/NAD(P)-binding domain VCD_001944 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily VCD_001944 IPR002903 Ribosomal RNA small subunit methyltransferase H VCD_001944 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_001945 IPR011922 Cell division protein FtsL VCD_001946 IPR037532 Peptidoglycan D,D-transpeptidase FtsI VCD_001946 IPR005311 Penicillin-binding protein, dimerisation domain VCD_001946 IPR001460 Penicillin-binding protein, transpeptidase VCD_001946 IPR036138 Penicillin-binding protein, dimerisation domain superfamily VCD_001946 IPR012338 Beta-lactamase/transpeptidase-like VCD_001947 IPR036615 Mur ligase, C-terminal domain superfamily VCD_001947 IPR013221 Mur ligase, central VCD_001947 IPR000713 Mur ligase, N-terminal catalytic domain VCD_001947 IPR035911 MurE/MurF, N-terminal VCD_001947 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase VCD_001947 IPR004101 Mur ligase, C-terminal VCD_001947 IPR036565 Mur-like, catalytic domain superfamily VCD_001948 IPR035911 MurE/MurF, N-terminal VCD_001948 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase VCD_001948 IPR000713 Mur ligase, N-terminal catalytic domain VCD_001948 IPR004101 Mur ligase, C-terminal VCD_001948 IPR036565 Mur-like, catalytic domain superfamily VCD_001948 IPR036615 Mur ligase, C-terminal domain superfamily VCD_001948 IPR013221 Mur ligase, central VCD_001949 IPR000715 Glycosyl transferase, family 4 VCD_001949 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase VCD_001949 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site VCD_001950 IPR004101 Mur ligase, C-terminal VCD_001950 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase VCD_001950 IPR036565 Mur-like, catalytic domain superfamily VCD_001950 IPR036615 Mur ligase, C-terminal domain superfamily VCD_001950 IPR013221 Mur ligase, central VCD_001951 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA VCD_001951 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VCD_001951 IPR013437 Probable peptidoglycan glycosyltransferase FtsW VCD_001952 IPR006009 N-acetylglucosaminyltransferase, MurG VCD_001952 IPR004276 Glycosyltransferase family 28, N-terminal domain VCD_001952 IPR007235 Glycosyl transferase, family 28, C-terminal VCD_001953 IPR013221 Mur ligase, central VCD_001953 IPR036565 Mur-like, catalytic domain superfamily VCD_001953 IPR036615 Mur ligase, C-terminal domain superfamily VCD_001953 IPR000713 Mur ligase, N-terminal catalytic domain VCD_001953 IPR004101 Mur ligase, C-terminal VCD_001953 IPR005758 UDP-N-acetylmuramate--L-alanine ligase VCD_001954 IPR013685 POTRA domain, FtsQ-type VCD_001954 IPR026579 Cell division protein FtsQ VCD_001954 IPR005548 Cell division protein FtsQ/DivIB VCD_001954 IPR034746 POTRA domain VCD_001955 IPR003494 SHS2 domain inserted in FtsA VCD_001955 IPR020823 Cell division protein FtsA VCD_001956 IPR036525 Tubulin/FtsZ, GTPase domain superfamily VCD_001956 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VCD_001956 IPR024757 Cell division protein FtsZ, C-terminal VCD_001956 IPR020805 Cell division protein FtsZ, conserved site VCD_001956 IPR000158 Cell division protein FtsZ VCD_001956 IPR003008 Tubulin/FtsZ, GTPase domain VCD_001956 IPR008280 Tubulin/FtsZ, C-terminal VCD_001957 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001957 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase VCD_001957 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal VCD_001957 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal VCD_001959 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001959 IPR004027 SEC-C motif VCD_001959 IPR000185 Protein translocase subunit SecA VCD_001959 IPR014018 SecA motor DEAD VCD_001959 IPR011115 SecA DEAD-like, N-terminal VCD_001959 IPR036670 SecA, preprotein cross-linking domain superfamily VCD_001959 IPR036266 SecA, Wing/Scaffold superfamily VCD_001959 IPR011116 SecA Wing/Scaffold VCD_001959 IPR011130 SecA, preprotein cross-linking domain VCD_001959 IPR020937 SecA conserved site VCD_001960 IPR015797 NUDIX hydrolase-like domain superfamily VCD_001960 IPR000086 NUDIX hydrolase domain VCD_001960 IPR020084 NUDIX hydrolase, conserved site VCD_001960 IPR020476 NUDIX hydrolase VCD_001960 IPR003561 Mutator MutT VCD_001961 IPR022663 Dihydrodipicolinate reductase, C-terminal VCD_001961 IPR000846 Dihydrodipicolinate reductase, N-terminal VCD_001961 IPR022664 Dihydrodipicolinate reductase, conserved site VCD_001961 IPR023940 Dihydrodipicolinate reductase VCD_001961 IPR036291 NAD(P)-binding domain superfamily VCD_001962 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily VCD_001962 IPR006274 Carbamoyl-phosphate synthase, small subunit VCD_001962 IPR017926 Glutamine amidotransferase VCD_001962 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain VCD_001962 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain VCD_001962 IPR029062 Class I glutamine amidotransferase-like VCD_001963 IPR016185 Pre-ATP-grasp domain superfamily VCD_001963 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily VCD_001963 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain VCD_001963 IPR036914 Methylglyoxal synthase-like domain superfamily VCD_001963 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain VCD_001963 IPR006275 Carbamoyl-phosphate synthase, large subunit VCD_001963 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain VCD_001963 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VCD_001963 IPR011761 ATP-grasp fold VCD_001963 IPR011607 Methylglyoxal synthase-like domain VCD_001965 IPR003593 AAA+ ATPase domain VCD_001965 IPR003439 ABC transporter-like VCD_001965 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_001966 IPR000477 Reverse transcriptase domain VCD_001966 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA VCD_001967 IPR002781 Transmembrane protein TauE-like VCD_001968 IPR036390 Winged helix DNA-binding domain superfamily VCD_001968 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001968 IPR000847 Transcription regulator HTH, LysR VCD_001968 IPR005119 LysR, substrate-binding VCD_001969 IPR005115 Uncharacterised domain UPF0126 VCD_001970 IPR002491 ABC transporter periplasmic binding domain VCD_001970 IPR023544 ABC transporter, vitamin B12-binding protein VCD_001972 IPR010049 MTA/SAH nucleosidase VCD_001972 IPR035994 Nucleoside phosphorylase superfamily VCD_001972 IPR000845 Nucleoside phosphorylase domain VCD_001974 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_001974 IPR028261 Dihydroprymidine dehydrogenase domain II VCD_001974 IPR009051 Alpha-helical ferredoxin VCD_001974 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 VCD_001974 IPR023753 FAD/NAD(P)-binding domain VCD_001974 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001975 IPR013785 Aldolase-type TIM barrel VCD_001975 IPR017932 Glutamine amidotransferase type 2 domain VCD_001975 IPR006982 Glutamate synthase, central-N VCD_001975 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily VCD_001975 IPR002489 Glutamate synthase, alpha subunit, C-terminal VCD_001975 IPR002932 Glutamate synthase domain VCD_001975 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_001976 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 VCD_001976 IPR028261 Dihydroprymidine dehydrogenase domain II VCD_001976 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_001976 IPR023753 FAD/NAD(P)-binding domain VCD_001976 IPR009051 Alpha-helical ferredoxin VCD_001977 IPR006982 Glutamate synthase, central-N VCD_001977 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily VCD_001977 IPR002489 Glutamate synthase, alpha subunit, C-terminal VCD_001977 IPR017932 Glutamine amidotransferase type 2 domain VCD_001977 IPR013785 Aldolase-type TIM barrel VCD_001977 IPR002932 Glutamate synthase domain VCD_001977 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_001978 IPR006638 Elp3/MiaB/NifB VCD_001978 IPR039661 ELP3/YhcC VCD_001978 IPR032432 Radical SAM, C-terminal extension VCD_001978 IPR007197 Radical SAM VCD_001978 IPR023404 Radical SAM, alpha/beta horseshoe VCD_001978 IPR005911 Protein YhcC-like VCD_001979 IPR013515 Phytochrome, central region VCD_001979 IPR000160 GGDEF domain VCD_001979 IPR001633 EAL domain VCD_001979 IPR029016 GAF-like domain superfamily VCD_001979 IPR001294 Phytochrome VCD_001979 IPR016132 Phytochrome chromophore attachment domain VCD_001979 IPR035919 EAL domain superfamily VCD_001979 IPR003018 GAF domain VCD_001979 IPR029787 Nucleotide cyclase VCD_001980 IPR035965 PAS domain superfamily VCD_001980 IPR001789 Signal transduction response regulator, receiver domain VCD_001980 IPR013767 PAS fold VCD_001980 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VCD_001980 IPR003594 Histidine kinase/HSP90-like ATPase VCD_001980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_001980 IPR005467 Histidine kinase domain VCD_001980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_001980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_001980 IPR040642 Histidine kinase receptor ArcB, transmembrane domain VCD_001980 IPR036641 HPT domain superfamily VCD_001980 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB VCD_001980 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_001980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_001980 IPR000014 PAS domain VCD_001980 IPR000700 PAS-associated, C-terminal VCD_001980 IPR011006 CheY-like superfamily VCD_001981 IPR016032 Signal transduction response regulator, C-terminal effector VCD_001981 IPR001789 Signal transduction response regulator, receiver domain VCD_001981 IPR039420 Transcriptional regulatory protein WalR-like VCD_001981 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_001981 IPR011006 CheY-like superfamily VCD_001981 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_001983 IPR010203 Regulator of ribonuclease activity A VCD_001983 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VCD_001983 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VCD_001985 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VCD_001985 IPR027795 CASTOR, ACT domain VCD_001985 IPR001342 Homoserine dehydrogenase, catalytic VCD_001985 IPR019811 Homoserine dehydrogenase, conserved site VCD_001985 IPR036291 NAD(P)-binding domain superfamily VCD_001985 IPR001341 Aspartate kinase VCD_001985 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VCD_001985 IPR018042 Aspartate kinase, conserved site VCD_001985 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain VCD_001985 IPR036393 Acetylglutamate kinase-like superfamily VCD_001985 IPR002912 ACT domain VCD_001985 IPR001048 Aspartate/glutamate/uridylate kinase VCD_001986 IPR006204 GHMP kinase N-terminal domain VCD_001986 IPR000870 Homoserine kinase VCD_001986 IPR006203 GHMP kinase, ATP-binding, conserved site VCD_001986 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_001986 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_001986 IPR036554 GHMP kinase, C-terminal domain superfamily VCD_001986 IPR013750 GHMP kinase, C-terminal domain VCD_001987 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VCD_001987 IPR001926 Pyridoxal-phosphate dependent enzyme VCD_001987 IPR004450 Threonine synthase-like VCD_001987 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCD_001987 IPR037158 Threonine synthase, N-terminal domain superfamily VCD_001987 IPR029144 Threonine synthase, N-terminal VCD_001988 IPR011140 Autonomous glycyl radical cofactor GrcA VCD_001988 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VCD_001988 IPR001150 Glycine radical domain VCD_001989 IPR013022 Xylose isomerase-like, TIM barrel domain VCD_001989 IPR036237 Xylose isomerase-like superfamily VCD_001989 IPR001719 AP endonuclease 2 VCD_001989 IPR018246 AP endonuclease 2, zinc binding site VCD_001990 IPR005122 Uracil-DNA glycosylase-like VCD_001990 IPR036895 Uracil-DNA glycosylase-like domain superfamily VCD_001990 IPR018085 Uracil-DNA glycosylase, active site VCD_001990 IPR002043 Uracil-DNA glycosylase family 1 VCD_001993 IPR001463 Sodium:alanine symporter VCD_001994 IPR005583 Peroxide stress protein YaaA VCD_001996 IPR018228 Deoxyribonuclease, TatD-related, conserved site VCD_001996 IPR032466 Metal-dependent hydrolase VCD_001996 IPR001130 TatD family VCD_001997 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VCD_001997 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VCD_001997 IPR011657 Concentrative nucleoside transporter C-terminal domain VCD_001997 IPR008276 Concentrative nucleoside transporter VCD_001997 IPR002668 Concentrative nucleoside transporter N-terminal domain VCD_001998 IPR013785 Aldolase-type TIM barrel VCD_001998 IPR011343 Deoxyribose-phosphate aldolase VCD_001998 IPR002915 DeoC/FbaB/ lacD aldolase VCD_001998 IPR023649 Deoxyribose-phosphate aldolase type II VCD_001999 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site VCD_001999 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily VCD_001999 IPR013465 Thymidine phosphorylase VCD_001999 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily VCD_001999 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal VCD_001999 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic VCD_001999 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase VCD_001999 IPR000312 Glycosyl transferase, family 3 VCD_001999 IPR017459 Glycosyl transferase family 3, N-terminal domain VCD_001999 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily VCD_002000 IPR006124 Metalloenzyme VCD_002000 IPR010045 Phosphopentomutase VCD_002000 IPR017850 Alkaline-phosphatase-like, core domain superfamily VCD_002000 IPR024052 Phosphopentomutase DeoB cap domain superfamily VCD_002001 IPR035994 Nucleoside phosphorylase superfamily VCD_002001 IPR000845 Nucleoside phosphorylase domain VCD_002001 IPR018016 Nucleoside phosphorylase, conserved site VCD_002001 IPR004402 Purine nucleoside phosphorylase DeoD-type VCD_002003 IPR023190 Phosphoserine phosphatase, domain 2 VCD_002003 IPR036412 HAD-like superfamily VCD_002003 IPR023214 HAD superfamily VCD_002003 IPR041449 Phosphoserine phosphatase, N-terminal VCD_002005 IPR041166 LapB, rubredoxin metal binding domain VCD_002005 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_002005 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain VCD_002005 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002005 IPR004504 DNA repair protein RadA VCD_002005 IPR003593 AAA+ ATPase domain VCD_002005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_002006 IPR009000 Translation protein, beta-barrel domain superfamily VCD_002006 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_002006 IPR005225 Small GTP-binding protein domain VCD_002006 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_002006 IPR000795 Transcription factor, GTP-binding domain VCD_002006 IPR009022 Elongation factor G, domain III VCD_002006 IPR031157 Tr-type G domain, conserved site VCD_002006 IPR004161 Translation elongation factor EFTu-like, domain 2 VCD_002006 IPR005517 Translation elongation factor EFG/EF2, domain IV VCD_002006 IPR035647 EF-G domain III/V-like VCD_002006 IPR000640 Elongation factor EFG, domain V-like VCD_002006 IPR035649 EFG, domain V VCD_002006 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002006 IPR041095 Elongation Factor G, domain II VCD_002006 IPR004540 Translation elongation factor EFG/EF2 VCD_002007 IPR042099 AMP-dependent synthetase-like superfamily VCD_002007 IPR020845 AMP-binding, conserved site VCD_002007 IPR000873 AMP-dependent synthetase/ligase VCD_002008 IPR003607 HD/PDEase domain VCD_002008 IPR037522 HD-GYP domain VCD_002008 IPR001789 Signal transduction response regulator, receiver domain VCD_002008 IPR011006 CheY-like superfamily VCD_002010 IPR006101 Glycoside hydrolase, family 2 VCD_002010 IPR023232 Glycoside hydrolase, family 2, active site VCD_002010 IPR008979 Galactose-binding-like domain superfamily VCD_002010 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase VCD_002010 IPR006103 Glycoside hydrolase family 2, catalytic domain VCD_002010 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VCD_002010 IPR014718 Glycoside hydrolase-type carbohydrate-binding VCD_002010 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich VCD_002010 IPR017853 Glycoside hydrolase superfamily VCD_002010 IPR004199 Beta galactosidase small chain/ domain 5 VCD_002010 IPR023230 Glycoside hydrolase, family 2, conserved site VCD_002010 IPR013783 Immunoglobulin-like fold VCD_002010 IPR032312 Beta-galactosidase, domain 4 VCD_002010 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VCD_002010 IPR011013 Galactose mutarotase-like domain superfamily VCD_002011 IPR028082 Periplasmic binding protein-like I VCD_002011 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_002011 IPR000843 LacI-type HTH domain VCD_002012 IPR012340 Nucleic acid-binding, OB-fold VCD_002012 IPR002547 tRNA-binding domain VCD_002014 IPR023714 Zinc transport protein ZntB VCD_002014 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB VCD_002016 IPR011761 ATP-grasp fold VCD_002016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VCD_002016 IPR041107 RimK, PreATP-grasp domain VCD_002016 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VCD_002016 IPR013651 ATP-grasp fold, RimK-type VCD_002016 IPR013815 ATP-grasp fold, subdomain 1 VCD_002016 IPR006037 Regulator of K+ conductance, C-terminal VCD_002017 IPR017813 Mycothiol acetyltransferase VCD_002017 IPR000182 GNAT domain VCD_002017 IPR016181 Acyl-CoA N-acyltransferase VCD_002019 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily VCD_002019 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain VCD_002019 IPR001451 Hexapeptide repeat VCD_002019 IPR011004 Trimeric LpxA-like superfamily VCD_002019 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family VCD_002019 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria VCD_002020 IPR038627 YebG-like superfamily VCD_002020 IPR009813 Uncharacterised protein family YebG VCD_002023 IPR006697 RecBCD enzyme subunit RecC VCD_002023 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002023 IPR013986 DExx box DNA helicase domain superfamily VCD_002023 IPR011335 Restriction endonuclease type II-like VCD_002023 IPR041500 RecC, C-terminal VCD_002024 IPR004586 RecBCD enzyme subunit RecB VCD_002024 IPR034739 UvrD/AddA helicase, N-terminal VCD_002024 IPR011335 Restriction endonuclease type II-like VCD_002024 IPR014016 UvrD-like helicase, ATP-binding domain VCD_002024 IPR000212 DNA helicase, UvrD/REP type VCD_002024 IPR014017 UvrD-like DNA helicase, C-terminal VCD_002024 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VCD_002024 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002024 IPR011604 Exonuclease, phage-type/RecB, C-terminal VCD_002025 IPR006344 RecBCD enzyme subunit RecD VCD_002025 IPR027785 UvrD-like helicase C-terminal domain VCD_002025 IPR003593 AAA+ ATPase domain VCD_002025 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002025 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain VCD_002027 IPR010167 Amino-acid N-acetyltransferase VCD_002027 IPR016181 Acyl-CoA N-acyltransferase VCD_002027 IPR001048 Aspartate/glutamate/uridylate kinase VCD_002027 IPR036393 Acetylglutamate kinase-like superfamily VCD_002027 IPR000182 GNAT domain VCD_002027 IPR033719 N-acetylglutamate synthase, kinase-like domain VCD_002031 IPR036908 RlpA-like domain superfamily VCD_002031 IPR005300 Lytic transglycosylase MltA, domain B VCD_002031 IPR010611 3D domain VCD_002031 IPR026044 Membrane-bound lytic murein transglycosylase A VCD_002031 IPR034654 MltA, 3D domain VCD_002032 IPR000594 THIF-type NAD/FAD binding fold VCD_002032 IPR035985 Ubiquitin-activating enzyme VCD_002033 IPR003808 Fe-S metabolism associated domain, SufE-like VCD_002033 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VCD_002034 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_002034 IPR015424 Pyridoxal phosphate-dependent transferase VCD_002034 IPR016454 Cysteine desulfurase VCD_002034 IPR010970 Cysteine desulfurase, SufS VCD_002034 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA VCD_002034 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_002034 IPR000192 Aminotransferase class V domain VCD_002035 IPR002818 DJ-1/PfpI VCD_002035 IPR029062 Class I glutamine amidotransferase-like VCD_002035 IPR006287 Protein/nucleic acid deglycase DJ-1 VCD_002036 IPR013332 Ketopantoate reductase, N-terminal domain VCD_002036 IPR036291 NAD(P)-binding domain superfamily VCD_002036 IPR013752 Ketopantoate reductase, C-terminal domain VCD_002036 IPR003710 Ketopantoate reductase ApbA/PanE VCD_002036 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VCD_002036 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_002037 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like VCD_002037 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily VCD_002037 IPR003055 Nucleoside-specific channel-forming protein Tsx VCD_002039 IPR007630 RNA polymerase sigma-70 region 4 VCD_002039 IPR013325 RNA polymerase sigma factor, region 2 VCD_002039 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002039 IPR013324 RNA polymerase sigma factor, region 3/4-like VCD_002039 IPR007627 RNA polymerase sigma-70 region 2 VCD_002039 IPR039425 RNA polymerase sigma-70 like VCD_002039 IPR014284 RNA polymerase sigma-70 like domain VCD_002041 IPR036259 MFS transporter superfamily VCD_002041 IPR011701 Major facilitator superfamily VCD_002041 IPR020846 Major facilitator superfamily domain VCD_002041 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 VCD_002042 IPR029000 Cyclophilin-like domain superfamily VCD_002042 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VCD_002042 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VCD_002044 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_002044 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD VCD_002044 IPR007848 Methyltransferase small domain VCD_002044 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002045 IPR002634 BolA protein VCD_002045 IPR036065 BolA-like superfamily VCD_002046 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A VCD_002046 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain VCD_002047 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD VCD_002047 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B VCD_002048 IPR007329 FMN-binding VCD_002048 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C VCD_002049 IPR003667 NqrDE/RnfAE VCD_002049 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D VCD_002050 IPR003667 NqrDE/RnfAE VCD_002050 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E VCD_002051 IPR017938 Riboflavin synthase-like beta-barrel VCD_002051 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VCD_002051 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VCD_002051 IPR012675 Beta-grasp domain superfamily VCD_002051 IPR017927 FAD-binding domain, ferredoxin reductase-type VCD_002051 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VCD_002051 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F VCD_002051 IPR001433 Oxidoreductase FAD/NAD(P)-binding VCD_002051 IPR036010 2Fe-2S ferredoxin-like superfamily VCD_002052 IPR042159 Flavin-trafficking protein ApbE VCD_002052 IPR003374 ApbE-like superfamily VCD_002052 IPR024932 Flavin transferase ApbE VCD_002054 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VCD_002054 IPR022880 DNA polymerase IV VCD_002054 IPR001126 UmuC domain VCD_002054 IPR024728 DNA polymerase type-Y, HhH motif VCD_002058 IPR037272 Sodium:neurotransmitter symporter superfamily VCD_002058 IPR000175 Sodium:neurotransmitter symporter VCD_002060 IPR011761 ATP-grasp fold VCD_002060 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VCD_002060 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VCD_002060 IPR041107 RimK, PreATP-grasp domain VCD_002060 IPR013815 ATP-grasp fold, subdomain 1 VCD_002060 IPR013651 ATP-grasp fold, RimK-type VCD_002061 IPR011761 ATP-grasp fold VCD_002061 IPR021109 Aspartic peptidase domain superfamily VCD_002061 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VCD_002061 IPR041107 RimK, PreATP-grasp domain VCD_002061 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VCD_002061 IPR013651 ATP-grasp fold, RimK-type VCD_002061 IPR013815 ATP-grasp fold, subdomain 1 VCD_002062 IPR001160 Peptidase M20C, Xaa-His dipeptidase VCD_002062 IPR011650 Peptidase M20, dimerisation domain VCD_002062 IPR002933 Peptidase M20 VCD_002064 IPR006043 Xanthine/uracil/vitamin C permease VCD_002064 IPR026033 Azaguanine-like transporters VCD_002065 IPR029057 Phosphoribosyltransferase-like VCD_002065 IPR023747 Xanthine-guanine phosphoribosyltransferase VCD_002065 IPR000836 Phosphoribosyltransferase domain VCD_002067 IPR009986 Sigma factor-binding transcriptional regulator Crl VCD_002067 IPR038208 Sigma factor-binding protein Crl superfamily VCD_002068 IPR011529 Glutamate 5-kinase VCD_002068 IPR001057 Glutamate/acetylglutamate kinase VCD_002068 IPR036974 PUA domain superfamily VCD_002068 IPR015947 PUA-like superfamily VCD_002068 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase VCD_002068 IPR002478 PUA domain VCD_002068 IPR019797 Glutamate 5-kinase, conserved site VCD_002068 IPR041739 Glutamate-5-kinase domain VCD_002068 IPR001048 Aspartate/glutamate/uridylate kinase VCD_002068 IPR036393 Acetylglutamate kinase-like superfamily VCD_002069 IPR015590 Aldehyde dehydrogenase domain VCD_002069 IPR000965 GPR domain VCD_002069 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_002069 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_002069 IPR016161 Aldehyde/histidinol dehydrogenase VCD_002069 IPR012134 Glutamate-5-semialdehyde dehydrogenase VCD_002069 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site VCD_002070 IPR005144 ATP-cone domain VCD_002070 IPR003796 Ribonucleotide reductase regulator NrdR-like VCD_002071 IPR011549 Riboflavin-specific deaminase, C-terminal VCD_002071 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal VCD_002071 IPR024072 Dihydrofolate reductase-like domain superfamily VCD_002071 IPR016193 Cytidine deaminase-like VCD_002071 IPR002125 Cytidine and deoxycytidylate deaminase domain VCD_002071 IPR004794 Riboflavin biosynthesis protein RibD VCD_002071 IPR016192 APOBEC/CMP deaminase, zinc-binding VCD_002072 IPR026017 Lumazine-binding domain VCD_002072 IPR017938 Riboflavin synthase-like beta-barrel VCD_002072 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily VCD_002072 IPR001783 Lumazine-binding protein VCD_002073 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VCD_002073 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VCD_002073 IPR032677 GTP cyclohydrolase II VCD_002073 IPR036144 RibA-like superfamily VCD_002074 IPR034964 Lumazine synthase VCD_002074 IPR036467 Lumazine/riboflavin synthase superfamily VCD_002074 IPR002180 Lumazine/riboflavin synthase VCD_002075 IPR011605 NusB antitermination factor VCD_002075 IPR035926 NusB-like superfamily VCD_002075 IPR006027 NusB/RsmB/TIM44 VCD_002076 IPR036676 PurM-like, C-terminal domain superfamily VCD_002076 IPR006283 Thiamine-monophosphate kinase VCD_002076 IPR016188 PurM-like, N-terminal domain VCD_002076 IPR036921 PurM-like, N-terminal domain superfamily VCD_002076 IPR010918 PurM-like, C-terminal domain VCD_002077 IPR026037 Phosphatidylglycerophosphatase A VCD_002077 IPR036681 PgpA-like superfamily VCD_002077 IPR007686 YutG/PgpA domain VCD_002078 IPR020911 Uncharacterised protein family UPF0325 VCD_002079 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme VCD_002079 IPR002934 Polymerase, nucleotidyl transferase domain VCD_002079 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VCD_002079 IPR006674 HD domain VCD_002079 IPR003607 HD/PDEase domain VCD_002079 IPR002912 ACT domain VCD_002080 IPR036005 Creatinase/aminopeptidase-like VCD_002080 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 VCD_002080 IPR001714 Peptidase M24, methionine aminopeptidase VCD_002080 IPR000994 Peptidase M24 VCD_002081 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VCD_002081 IPR018130 Ribosomal protein S2, conserved site VCD_002081 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid VCD_002081 IPR001865 Ribosomal protein S2 VCD_002082 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation VCD_002082 IPR009060 UBA-like superfamily VCD_002082 IPR018101 Translation elongation factor Ts, conserved site VCD_002082 IPR001816 Translation elongation factor EFTs/EF1B VCD_002082 IPR036402 Elongation factor Ts, dimerisation domain superfamily VCD_002083 IPR001048 Aspartate/glutamate/uridylate kinase VCD_002083 IPR011817 Uridylate kinase VCD_002083 IPR015963 Uridylate kinase, bacteria VCD_002083 IPR036393 Acetylglutamate kinase-like superfamily VCD_002084 IPR002661 Ribosome recycling factor VCD_002084 IPR023584 Ribosome recycling factor domain VCD_002084 IPR036191 RRF superfamily VCD_002085 IPR001441 Decaprenyl diphosphate synthase-like VCD_002085 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site VCD_002085 IPR036424 Decaprenyl diphosphate synthase-like superfamily VCD_002086 IPR000374 Phosphatidate cytidylyltransferase VCD_002087 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase VCD_002087 IPR036291 NAD(P)-binding domain superfamily VCD_002087 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal VCD_002087 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal VCD_002087 IPR036169 DXP reductoisomerase, C-terminal domain superfamily VCD_002087 IPR026877 DXP reductoisomerase C-terminal domain VCD_002088 IPR001478 PDZ domain VCD_002088 IPR041489 PDZ domain 6 VCD_002088 IPR036034 PDZ superfamily VCD_002088 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase VCD_002088 IPR008915 Peptidase M50 VCD_002089 IPR023707 Outer membrane protein assembly factor BamA VCD_002089 IPR039910 Surface antigen D15-like VCD_002089 IPR034746 POTRA domain VCD_002089 IPR010827 POTRA domain, BamA/TamA-like VCD_002089 IPR000184 Bacterial surface antigen (D15) VCD_002090 IPR005632 Chaperone protein Skp VCD_002090 IPR024930 Skp domain superfamily VCD_002091 IPR001451 Hexapeptide repeat VCD_002091 IPR018357 Hexapeptide transferase, conserved site VCD_002091 IPR011004 Trimeric LpxA-like superfamily VCD_002091 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region VCD_002091 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD VCD_002092 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ VCD_002092 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VCD_002092 IPR029069 HotDog domain superfamily VCD_002093 IPR018357 Hexapeptide transferase, conserved site VCD_002093 IPR011004 Trimeric LpxA-like superfamily VCD_002093 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase VCD_002093 IPR001451 Hexapeptide repeat VCD_002093 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily VCD_002093 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal VCD_002094 IPR003835 Glycosyl transferase, family 19 VCD_002095 IPR022898 Ribonuclease HII VCD_002095 IPR036397 Ribonuclease H superfamily VCD_002095 IPR024567 Ribonuclease HII/HIII domain VCD_002095 IPR012337 Ribonuclease H-like superfamily VCD_002095 IPR001352 Ribonuclease HII/HIII VCD_002096 IPR004013 PHP domain VCD_002096 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain VCD_002096 IPR003141 Polymerase/histidinol phosphatase, N-terminal VCD_002096 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VCD_002096 IPR016195 Polymerase/histidinol phosphatase-like VCD_002096 IPR029460 DNA polymerase, helix-hairpin-helix motif VCD_002096 IPR004805 DNA polymerase III, alpha subunit VCD_002096 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain VCD_002096 IPR040982 DNA polymerase III alpha subunit finger domain VCD_002097 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal VCD_002097 IPR029045 ClpP/crotonase-like domain superfamily VCD_002097 IPR001095 Acetyl-CoA carboxylase, alpha subunit VCD_002098 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal VCD_002098 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain VCD_002098 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal VCD_002098 IPR012094 tRNA(Ile)-lysidine synthase VCD_002098 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VCD_002098 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002099 IPR009056 Cytochrome c-like domain VCD_002099 IPR036909 Cytochrome c-like domain superfamily VCD_002100 IPR008729 Phenolic acid decarboxylase VCD_002100 IPR012674 Calycin VCD_002101 IPR002187 Nitrogen regulatory protein PII VCD_002101 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VCD_002101 IPR011322 Nitrogen regulatory PII-like, alpha/beta VCD_002101 IPR017918 Nitrogen regulatory protein PII, conserved site VCD_002101 IPR002332 Nitrogen regulatory protein P-II, urydylation site VCD_002102 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VCD_002102 IPR005135 Endonuclease/exonuclease/phosphatase VCD_002102 IPR022958 Uncharacterised protein family UPF0294 VCD_002103 IPR036779 LysM domain superfamily VCD_002103 IPR000189 Prokaryotic transglycosylase, active site VCD_002103 IPR023346 Lysozyme-like domain superfamily VCD_002103 IPR008258 Transglycosylase SLT domain 1 VCD_002103 IPR018392 LysM domain VCD_002104 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain VCD_002104 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VCD_002104 IPR001279 Metallo-beta-lactamase VCD_002104 IPR017782 Hydroxyacylglutathione hydrolase VCD_002104 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain VCD_002105 IPR026669 Arsenite methyltransferase-like VCD_002105 IPR013216 Methyltransferase type 11 VCD_002105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002106 IPR002156 Ribonuclease H domain VCD_002106 IPR012337 Ribonuclease H-like superfamily VCD_002106 IPR036397 Ribonuclease H superfamily VCD_002106 IPR022892 Ribonuclease HI VCD_002107 IPR006309 DNA polymerase 3, epsilon subunit VCD_002107 IPR036397 Ribonuclease H superfamily VCD_002107 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain VCD_002107 IPR013520 Exonuclease, RNase T/DNA polymerase III VCD_002107 IPR012337 Ribonuclease H-like superfamily VCD_002109 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VCD_002109 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VCD_002109 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VCD_002109 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VCD_002109 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VCD_002109 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VCD_002109 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VCD_002110 IPR001347 Sugar isomerase (SIS) VCD_002110 IPR035461 GmhA/DiaA VCD_002110 IPR004515 Phosphoheptose isomerase VCD_002111 IPR026869 Putative glutamine amidotransferase type 2 VCD_002111 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_002111 IPR017932 Glutamine amidotransferase type 2 domain VCD_002112 IPR004607 Phosphoribosylglycinamide formyltransferase VCD_002112 IPR002376 Formyl transferase, N-terminal VCD_002112 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VCD_002112 IPR036477 Formyl transferase, N-terminal domain superfamily VCD_002113 IPR010918 PurM-like, C-terminal domain VCD_002113 IPR016188 PurM-like, N-terminal domain VCD_002113 IPR036921 PurM-like, N-terminal domain superfamily VCD_002113 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase VCD_002113 IPR036676 PurM-like, C-terminal domain superfamily VCD_002114 IPR029057 Phosphoribosyltransferase-like VCD_002114 IPR005765 Uracil phosphoribosyl transferase VCD_002114 IPR034332 Uracil phosphoribosyltransferase, bacterial-type VCD_002114 IPR000836 Phosphoribosyltransferase domain VCD_002115 IPR013656 PAS fold-4 VCD_002115 IPR035965 PAS domain superfamily VCD_002115 IPR000700 PAS-associated, C-terminal VCD_002115 IPR000014 PAS domain VCD_002115 IPR029787 Nucleotide cyclase VCD_002115 IPR000160 GGDEF domain VCD_002116 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VCD_002116 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_002116 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_002116 IPR036986 RNA-binding S4 domain superfamily VCD_002116 IPR002942 RNA-binding S4 domain VCD_002116 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VCD_002116 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VCD_002117 IPR002625 Smr domain VCD_002117 IPR036063 Smr domain superfamily VCD_002119 IPR002816 TraB family VCD_002121 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain VCD_002121 IPR014756 Immunoglobulin E-set VCD_002121 IPR013783 Immunoglobulin-like fold VCD_002121 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VCD_002121 IPR015883 Glycoside hydrolase family 20, catalytic domain VCD_002121 IPR017853 Glycoside hydrolase superfamily VCD_002121 IPR025705 Beta-hexosaminidase VCD_002121 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily VCD_002121 IPR012291 CBM2, carbohydrate-binding domain superfamily VCD_002121 IPR004867 Chitobiase C-terminal domain VCD_002121 IPR029018 Beta-hexosaminidase-like, domain 2 VCD_002123 IPR018303 P-type ATPase, phosphorylation site VCD_002123 IPR023299 P-type ATPase, cytoplasmic domain N VCD_002123 IPR036412 HAD-like superfamily VCD_002123 IPR023214 HAD superfamily VCD_002123 IPR017969 Heavy-metal-associated, conserved site VCD_002123 IPR006121 Heavy metal-associated domain, HMA VCD_002123 IPR036163 Heavy metal-associated domain superfamily VCD_002123 IPR027256 P-type ATPase, subfamily IB VCD_002123 IPR023298 P-type ATPase, transmembrane domain superfamily VCD_002123 IPR008250 P-type ATPase, A domain superfamily VCD_002123 IPR001757 P-type ATPase VCD_002124 IPR033910 Glutamyl-tRNA synthetase VCD_002124 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002124 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VCD_002124 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial VCD_002124 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding VCD_002124 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_002124 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 VCD_002124 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VCD_002125 IPR036737 OmpA-like domain superfamily VCD_002125 IPR002368 Outer membrane protein, OmpA VCD_002125 IPR006665 OmpA-like domain VCD_002125 IPR006690 Outer membrane protein, OmpA-like, conserved site VCD_002125 IPR006664 Outer membrane protein, bacterial VCD_002125 IPR000498 Outer membrane protein OmpA-like, transmembrane domain VCD_002125 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VCD_002127 IPR010105 TonB-dependent siderophore receptor VCD_002127 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VCD_002127 IPR012910 TonB-dependent receptor, plug domain VCD_002127 IPR039426 Vitamin B12 transporter BtuB-like VCD_002127 IPR030150 TonB-dependent siderophore receptor ViuA VCD_002128 IPR017927 FAD-binding domain, ferredoxin reductase-type VCD_002128 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VCD_002128 IPR017938 Riboflavin synthase-like beta-barrel VCD_002128 IPR007037 Siderophore-interacting protein, C-terminal domain VCD_002128 IPR039374 Siderophore-interacting protein VCD_002128 IPR013113 FAD-binding 9, siderophore-interacting VCD_002129 IPR010071 Amino acid adenylation domain VCD_002129 IPR042099 AMP-dependent synthetase-like superfamily VCD_002129 IPR001242 Condensation domain VCD_002129 IPR013217 Methyltransferase type 12 VCD_002129 IPR020806 Polyketide synthase, phosphopantetheine-binding domain VCD_002129 IPR009081 Phosphopantetheine binding ACP domain VCD_002129 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002129 IPR006162 Phosphopantetheine attachment site VCD_002129 IPR000873 AMP-dependent synthetase/ligase VCD_002129 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VCD_002129 IPR020845 AMP-binding, conserved site VCD_002129 IPR036736 ACP-like superfamily VCD_002136 IPR001789 Signal transduction response regulator, receiver domain VCD_002136 IPR024181 Chemotaxis response regulator CheV VCD_002136 IPR036061 CheW-like domain superfamily VCD_002136 IPR002545 CheW-like domain VCD_002136 IPR011006 CheY-like superfamily VCD_002137 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCD_002137 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VCD_002137 IPR000780 MCP methyltransferase, CheR-type VCD_002137 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VCD_002137 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002138 IPR001444 Flagellar basal body rod protein, N-terminal VCD_002138 IPR019776 Flagellar basal body rod protein, conserved site VCD_002138 IPR006300 Flagellar basal-body rod protein FlgB VCD_002139 IPR019776 Flagellar basal body rod protein, conserved site VCD_002139 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCD_002139 IPR001444 Flagellar basal body rod protein, N-terminal VCD_002139 IPR006299 Flagellar basal-body rod protein FlgC VCD_002140 IPR005648 Flagellar hook capping protein VCD_002140 IPR025965 FlgD Ig-like domain VCD_002140 IPR025963 FlgD Tudor-like domain VCD_002141 IPR019776 Flagellar basal body rod protein, conserved site VCD_002141 IPR001444 Flagellar basal body rod protein, N-terminal VCD_002141 IPR037058 Flagellar hook protein FlgE superfamily VCD_002141 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VCD_002141 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCD_002141 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VCD_002141 IPR011491 Flagellar hook protein FlgE VCD_002142 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VCD_002142 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCD_002142 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VCD_002142 IPR019776 Flagellar basal body rod protein, conserved site VCD_002142 IPR001444 Flagellar basal body rod protein, N-terminal VCD_002143 IPR001444 Flagellar basal body rod protein, N-terminal VCD_002143 IPR019776 Flagellar basal body rod protein, conserved site VCD_002143 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VCD_002143 IPR012834 Flagellar basal-body rod FlgG VCD_002143 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VCD_002143 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCD_002144 IPR000527 Flagellar L-ring protein VCD_002145 IPR001782 Flagellar P-ring protein VCD_002146 IPR019301 Flagellar protein FlgJ, N-terminal VCD_002146 IPR013377 Peptidoglycan hydrolase FlgJ VCD_002146 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VCD_002147 IPR002371 Flagellar hook-associated protein 1 VCD_002147 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCD_002147 IPR010810 Flagellin hook, IN motif VCD_002149 IPR010810 Flagellin hook, IN motif VCD_002149 IPR001029 Flagellin, D0/D1 domain VCD_002149 IPR042187 Flagellin, C-terminal domain, subdomain 2 VCD_002149 IPR001492 Flagellin VCD_002150 IPR011010 DNA breaking-rejoining enzyme, catalytic core VCD_002150 IPR013762 Integrase-like, catalytic domain superfamily VCD_002150 IPR002104 Integrase, catalytic domain VCD_002150 IPR010998 Integrase/recombinase, N-terminal VCD_002150 IPR004107 Integrase, SAM-like, N-terminal VCD_002150 IPR011931 Tyrosine recombinase XerC VCD_002150 IPR023009 Tyrosine recombinase XerC/XerD VCD_002162 IPR008766 Replication gene A protein VCD_002165 IPR030935 Phage portal protein PBSX family, Proteobacteria VCD_002165 IPR006430 Phage portal protein PBSX family VCD_002191 IPR001029 Flagellin, D0/D1 domain VCD_002191 IPR042187 Flagellin, C-terminal domain, subdomain 2 VCD_002191 IPR001492 Flagellin VCD_002191 IPR010810 Flagellin hook, IN motif VCD_002193 IPR023192 TGS-like domain superfamily VCD_002193 IPR012676 TGS-like VCD_002193 IPR004095 TGS VCD_002193 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002193 IPR006073 GTP binding domain VCD_002193 IPR031167 OBG-type guanine nucleotide-binding (G) domain VCD_002193 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 VCD_002193 IPR013029 YchF, C-terminal domain VCD_002193 IPR041706 YchF, N-terminal VCD_002193 IPR012675 Beta-grasp domain superfamily VCD_002194 IPR036416 Peptidyl-tRNA hydrolase superfamily VCD_002194 IPR001328 Peptidyl-tRNA hydrolase VCD_002194 IPR018171 Peptidyl-tRNA hydrolase, conserved site VCD_002195 IPR029057 Phosphoribosyltransferase-like VCD_002195 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type VCD_002195 IPR000836 Phosphoribosyltransferase domain VCD_002195 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain VCD_002195 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site VCD_002195 IPR005946 Ribose-phosphate pyrophosphokinase VCD_002196 IPR006204 GHMP kinase N-terminal domain VCD_002196 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase VCD_002196 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_002196 IPR036554 GHMP kinase, C-terminal domain superfamily VCD_002196 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_002196 IPR013750 GHMP kinase, C-terminal domain VCD_002197 IPR004565 Outer membrane lipoprotein LolB VCD_002197 IPR029046 Lipoprotein localisation LolA/LolB/LppX VCD_002198 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain VCD_002198 IPR018214 Glutamyl-tRNA reductase, conserved site VCD_002198 IPR036291 NAD(P)-binding domain superfamily VCD_002198 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal VCD_002198 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily VCD_002198 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase VCD_002198 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VCD_002198 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily VCD_002199 IPR005139 Peptide chain release factor VCD_002199 IPR000352 Peptide chain release factor class I VCD_002199 IPR004373 Peptide chain release factor 1 VCD_002200 IPR004556 Methyltransferase HemK-like VCD_002200 IPR025714 Methyltransferase domain VCD_002200 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific VCD_002200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002200 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_002200 IPR040758 Release factor glutamine methyltransferase, N-terminal domain VCD_002201 IPR007360 Invasion gene expression up-regulator, SirB VCD_002202 IPR032698 Protein SirB1, N-terminal VCD_002202 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_002203 IPR013785 Aldolase-type TIM barrel VCD_002203 IPR006218 DAHP synthetase I/KDSA VCD_002203 IPR006269 3-deoxy-8-phosphooctulonate synthase VCD_002204 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VCD_002204 IPR029052 Metallo-dependent phosphatase-like VCD_002204 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VCD_002204 IPR008334 5'-Nucleotidase, C-terminal VCD_002204 IPR006179 5'-Nucleotidase/apyrase VCD_002204 IPR006146 5'-Nucleotidase, conserved site VCD_002205 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VCD_002205 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily VCD_002205 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VCD_002206 IPR006042 Xanthine/uracil permease VCD_002206 IPR029935 Uracil permease VCD_002206 IPR006043 Xanthine/uracil/vitamin C permease VCD_002209 IPR005025 NADPH-dependent FMN reductase-like VCD_002209 IPR001226 Flavodoxin, conserved site VCD_002209 IPR029039 Flavoprotein-like superfamily VCD_002209 IPR010089 Flavoprotein WrbA-like VCD_002209 IPR008254 Flavodoxin/nitric oxide synthase VCD_002210 IPR006660 Arsenate reductase-like VCD_002210 IPR036249 Thioredoxin-like superfamily VCD_002210 IPR006659 Arsenate reductase VCD_002211 IPR019734 Tetratricopeptide repeat VCD_002211 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_002211 IPR013026 Tetratricopeptide repeat-containing domain VCD_002211 IPR030873 Beta-barrel assembly-enhancing protease VCD_002211 IPR001915 Peptidase M48 VCD_002213 IPR002549 Transmembrane protein TqsA-like VCD_002214 IPR003660 HAMP domain VCD_002214 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002214 IPR029151 Periplasmic sensor-like domain superfamily VCD_002214 IPR004090 Chemotaxis methyl-accepting receptor VCD_002214 IPR000727 Target SNARE coiled-coil homology domain VCD_002214 IPR033479 Double Cache domain 1 VCD_002215 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VCD_002215 IPR024706 Peroxiredoxin, AhpC-type VCD_002215 IPR036249 Thioredoxin-like superfamily VCD_002215 IPR013766 Thioredoxin domain VCD_002217 IPR013785 Aldolase-type TIM barrel VCD_002217 IPR020624 Schiff base-forming aldolase, conserved site VCD_002217 IPR020625 Schiff base-forming aldolase, active site VCD_002217 IPR002220 DapA-like VCD_002217 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA VCD_002218 IPR010653 NlpB/DapX lipoprotein VCD_002218 IPR042268 Outer membrane protein assembly factor BamC, C-terminal VCD_002218 IPR014524 Outer membrane protein assembly factor BamC VCD_002220 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily VCD_002220 IPR003709 Peptidase M15B VCD_002221 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VCD_002221 IPR036264 Bacterial exopeptidase dimerisation domain VCD_002221 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria VCD_002221 IPR002933 Peptidase M20 VCD_002221 IPR011650 Peptidase M20, dimerisation domain VCD_002222 IPR006660 Arsenate reductase-like VCD_002222 IPR006504 Transcriptional regulator Spx/MgsR VCD_002222 IPR036249 Thioredoxin-like superfamily VCD_002225 IPR021318 Protein of unknown function DUF2919 VCD_002226 IPR006314 Dyp-type peroxidase VCD_002226 IPR011008 Dimeric alpha-beta barrel VCD_002227 IPR001492 Flagellin VCD_002227 IPR042187 Flagellin, C-terminal domain, subdomain 2 VCD_002227 IPR001029 Flagellin, D0/D1 domain VCD_002227 IPR010810 Flagellin hook, IN motif VCD_002228 IPR042187 Flagellin, C-terminal domain, subdomain 2 VCD_002228 IPR001029 Flagellin, D0/D1 domain VCD_002228 IPR001492 Flagellin VCD_002228 IPR010810 Flagellin hook, IN motif VCD_002229 IPR010810 Flagellin hook, IN motif VCD_002229 IPR001029 Flagellin, D0/D1 domain VCD_002229 IPR042187 Flagellin, C-terminal domain, subdomain 2 VCD_002229 IPR001492 Flagellin VCD_002230 IPR005186 FlaG protein VCD_002230 IPR035924 FlaG-like superfamily VCD_002231 IPR010809 Flagellar hook-associated protein 2, C-terminal VCD_002231 IPR010810 Flagellin hook, IN motif VCD_002231 IPR003481 Flagellar hook-associated protein 2, N-terminal VCD_002231 IPR040026 Flagellar hook-associated protein 2 VCD_002233 IPR003713 Flagellar protein FliS VCD_002233 IPR036584 Flagellar protein FliS superfamily VCD_002234 IPR010114 DNA-binding transcriptional regulator NtrC VCD_002234 IPR025944 Sigma-54 interaction domain, conserved site VCD_002234 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_002234 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_002234 IPR001789 Signal transduction response regulator, receiver domain VCD_002234 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002234 IPR002197 DNA binding HTH domain, Fis-type VCD_002234 IPR009057 Homeobox-like domain superfamily VCD_002234 IPR003593 AAA+ ATPase domain VCD_002234 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_002234 IPR011006 CheY-like superfamily VCD_002235 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002235 IPR005467 Histidine kinase domain VCD_002235 IPR035965 PAS domain superfamily VCD_002235 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002235 IPR038318 KdpD, transmembrane domain superfamily VCD_002235 IPR025201 Sensor protein KdpD, transmembrane domain VCD_002235 IPR001610 PAC motif VCD_002235 IPR000014 PAS domain VCD_002235 IPR000700 PAS-associated, C-terminal VCD_002235 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_002235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002235 IPR013655 PAS fold-3 VCD_002235 IPR013767 PAS fold VCD_002236 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_002236 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_002236 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_002236 IPR003593 AAA+ ATPase domain VCD_002236 IPR002197 DNA binding HTH domain, Fis-type VCD_002236 IPR025944 Sigma-54 interaction domain, conserved site VCD_002236 IPR009057 Homeobox-like domain superfamily VCD_002236 IPR011006 CheY-like superfamily VCD_002236 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002236 IPR001789 Signal transduction response regulator, receiver domain VCD_002237 IPR001624 Flagellar hook-basal body complex protein FliE VCD_002238 IPR013556 Flagellar M-ring C-terminal VCD_002238 IPR006182 Secretory protein YscJ/FliF VCD_002238 IPR000067 Flagellar M-ring protein FliF VCD_002239 IPR032779 Flagellar motor switch protein FliG, middle domain VCD_002239 IPR011002 Flagellar motor switch protein FliG, alpha-helical VCD_002239 IPR023087 Flagellar motor switch protein FliG, C-terminal VCD_002239 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VCD_002239 IPR000090 Flagellar motor switch protein FliG VCD_002240 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VCD_002241 IPR003593 AAA+ ATPase domain VCD_002241 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002241 IPR040627 T3SS EscN ATPase, C-terminal VCD_002241 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VCD_002241 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VCD_002241 IPR020005 Flagellar export ATPase FliI, clade 1 VCD_002241 IPR032463 ATPase, type III secretion system, FliI VCD_002241 IPR005714 ATPase, type III secretion system, FliI/YscN VCD_002244 IPR005503 Flagellar basal body-associated protein FliL VCD_002245 IPR028976 CheC-like superfamily VCD_002245 IPR036429 SpoA-like superfamily VCD_002245 IPR001689 Flagellar motor switch protein FliM VCD_002245 IPR001543 Surface presentation of antigen (SpoA) VCD_002246 IPR012826 Flagellar motor switch FliN VCD_002246 IPR036429 SpoA-like superfamily VCD_002246 IPR001543 Surface presentation of antigen (SpoA) VCD_002246 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb VCD_002247 IPR022781 Flagellar biosynthesis protein, FliO VCD_002248 IPR005837 Flagellar transport protein FliP VCD_002248 IPR005838 Type III secretion system inner membrane P protein VCD_002249 IPR006305 Flagellar biosynthesis protein FliQ VCD_002249 IPR002191 Bacterial export protein family 3 VCD_002250 IPR002010 Type III secretion system inner membrane R protein VCD_002250 IPR006303 Flagellar biosynthesis protein FliR VCD_002251 IPR029025 Type III secretion system substrate exporter, C-terminal VCD_002251 IPR006136 Flagellar biosynthetic protein FlhB VCD_002251 IPR006135 Type III secretion system substrate exporter VCD_002252 IPR002625 Smr domain VCD_002252 IPR036063 Smr domain superfamily VCD_002252 IPR022990 Uncharacterised protein family UPF0115 VCD_002253 IPR004556 Methyltransferase HemK-like VCD_002253 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002253 IPR007848 Methyltransferase small domain VCD_002253 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_002253 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase VCD_002254 IPR020541 Chorismate synthase, conserved site VCD_002254 IPR000453 Chorismate synthase VCD_002254 IPR035904 Chorismate synthase AroC superfamily VCD_002255 IPR005115 Uncharacterised domain UPF0126 VCD_002256 IPR007411 Elongation factor P hydroxylase VCD_002257 IPR014987 Uncharacterised protein family YfcL VCD_002258 IPR005025 NADPH-dependent FMN reductase-like VCD_002258 IPR029039 Flavoprotein-like superfamily VCD_002259 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_002259 IPR006076 FAD dependent oxidoreductase VCD_002259 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal VCD_002259 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC VCD_002259 IPR008471 MnmC-like methyltransferase VCD_002260 IPR000794 Beta-ketoacyl synthase VCD_002260 IPR018201 Beta-ketoacyl synthase, active site VCD_002260 IPR014031 Beta-ketoacyl synthase, C-terminal VCD_002260 IPR014030 Beta-ketoacyl synthase, N-terminal VCD_002260 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VCD_002260 IPR016039 Thiolase-like VCD_002261 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCD_002261 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain VCD_002261 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VCD_002261 IPR020921 Erythronate-4-phosphate dehydrogenase VCD_002261 IPR036291 NAD(P)-binding domain superfamily VCD_002261 IPR038251 PdxB, dimerisation domain superfamily VCD_002261 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCD_002262 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VCD_002262 IPR000534 Semialdehyde dehydrogenase, NAD-binding VCD_002262 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type VCD_002262 IPR012080 Aspartate-semialdehyde dehydrogenase VCD_002262 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VCD_002262 IPR036291 NAD(P)-binding domain superfamily VCD_002263 IPR002481 Ferric-uptake regulator VCD_002263 IPR036390 Winged helix DNA-binding domain superfamily VCD_002263 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002265 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002265 IPR000847 Transcription regulator HTH, LysR VCD_002265 IPR005119 LysR, substrate-binding VCD_002265 IPR036390 Winged helix DNA-binding domain superfamily VCD_002266 IPR023760 Holin-like protein CidA VCD_002266 IPR005538 LrgA/CidA family VCD_002267 IPR005261 Conserved hypothetical protein CHP00659 VCD_002267 IPR007300 CidB/LrgB family VCD_002268 IPR001226 Flavodoxin, conserved site VCD_002268 IPR010086 Flavodoxin, long chain VCD_002268 IPR008254 Flavodoxin/nitric oxide synthase VCD_002268 IPR029039 Flavoprotein-like superfamily VCD_002270 IPR029058 Alpha/Beta hydrolase fold VCD_002270 IPR000073 Alpha/beta hydrolase fold-1 VCD_002271 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain VCD_002271 IPR005621 Negative modulator of initiation of replication SeqA VCD_002271 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily VCD_002271 IPR010985 Ribbon-helix-helix VCD_002271 IPR013321 Arc-type ribbon-helix-helix VCD_002271 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VCD_002272 IPR005843 Alpha-D-phosphohexomutase, C-terminal VCD_002272 IPR005852 Phosphoglucomutase, alpha-D-glucose specific VCD_002272 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VCD_002272 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VCD_002272 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VCD_002272 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VCD_002272 IPR016066 Alpha-D-phosphohexomutase, conserved site VCD_002272 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VCD_002274 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VCD_002274 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VCD_002275 IPR010953 Citrate synthase, type I VCD_002275 IPR002020 Citrate synthase VCD_002275 IPR019810 Citrate synthase active site VCD_002275 IPR024176 Citrate synthase, bacterial-type VCD_002275 IPR036969 Citrate synthase superfamily VCD_002275 IPR016142 Citrate synthase-like, large alpha subdomain VCD_002275 IPR016143 Citrate synthase-like, small alpha subdomain VCD_002276 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit VCD_002276 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VCD_002276 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site VCD_002276 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit VCD_002277 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor VCD_002277 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit VCD_002277 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VCD_002278 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VCD_002278 IPR011281 Succinate dehydrogenase, flavoprotein subunit VCD_002278 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VCD_002278 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VCD_002278 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VCD_002278 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_002278 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VCD_002278 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VCD_002279 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VCD_002279 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VCD_002279 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VCD_002279 IPR009051 Alpha-helical ferredoxin VCD_002279 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_002279 IPR012675 Beta-grasp domain superfamily VCD_002279 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_002279 IPR036010 2Fe-2S ferredoxin-like superfamily VCD_002280 IPR001017 Dehydrogenase, E1 component VCD_002280 IPR005475 Transketolase-like, pyrimidine-binding domain VCD_002280 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain VCD_002280 IPR029061 Thiamin diphosphate-binding fold VCD_002280 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily VCD_002280 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal VCD_002280 IPR011603 2-oxoglutarate dehydrogenase E1 component VCD_002281 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VCD_002281 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VCD_002281 IPR036625 E3-binding domain superfamily VCD_002281 IPR000089 Biotin/lipoyl attachment VCD_002281 IPR011053 Single hybrid motif VCD_002281 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VCD_002281 IPR006255 Dihydrolipoamide succinyltransferase VCD_002281 IPR004167 Peripheral subunit-binding domain VCD_002282 IPR011761 ATP-grasp fold VCD_002282 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type VCD_002282 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VCD_002282 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site VCD_002282 IPR005809 Succinate--CoA synthetase, beta subunit VCD_002282 IPR016102 Succinyl-CoA synthetase-like VCD_002282 IPR013815 ATP-grasp fold, subdomain 1 VCD_002283 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VCD_002283 IPR036291 NAD(P)-binding domain superfamily VCD_002283 IPR003781 CoA-binding VCD_002283 IPR016102 Succinyl-CoA synthetase-like VCD_002283 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VCD_002283 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VCD_002283 IPR005810 Succinyl-CoA ligase, alpha subunit VCD_002284 IPR001626 ABC transporter, TroCD-like VCD_002284 IPR037294 ABC transporter, BtuC-like VCD_002285 IPR017882 Zinc import ATP-binding protein ZnuC VCD_002285 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002285 IPR003439 ABC transporter-like VCD_002285 IPR003593 AAA+ ATPase domain VCD_002286 IPR035520 High-affinity zinc uptake system protein ZnuA VCD_002286 IPR006127 Periplasmic solute binding protein, ZnuA-like VCD_002286 IPR006128 Adhesion lipoprotein VCD_002287 IPR023609 Transcription regulator HTH, RhaS VCD_002287 IPR020449 Transcription regulator HTH, AraC- type VCD_002287 IPR011051 RmlC-like cupin domain superfamily VCD_002287 IPR014710 RmlC-like jelly roll fold VCD_002287 IPR018060 DNA binding HTH domain, AraC-type VCD_002287 IPR009057 Homeobox-like domain superfamily VCD_002287 IPR003313 AraC-type arabinose-binding/dimerisation domain VCD_002289 IPR007167 Ferrous iron transporter FeoA domain VCD_002289 IPR038157 Ferrous iron transporter, core domain VCD_002289 IPR008988 Transcriptional repressor, C-terminal VCD_002290 IPR006073 GTP binding domain VCD_002290 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VCD_002290 IPR030389 FeoB-type guanine nucleotide-binding (G) domain VCD_002290 IPR011640 Ferrous iron transport protein B, C-terminal VCD_002290 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002290 IPR003373 Ferrous iron transport protein B VCD_002293 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily VCD_002293 IPR005148 Arginyl tRNA synthetase N-terminal domain VCD_002293 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VCD_002293 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_002293 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002293 IPR035684 Arginyl-tRNA synthetase, catalytic core domain VCD_002293 IPR008909 DALR anticodon binding VCD_002293 IPR001278 Arginine-tRNA ligase VCD_002295 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VCD_002295 IPR011765 Peptidase M16, N-terminal VCD_002295 IPR001431 Peptidase M16, zinc-binding site VCD_002295 IPR007863 Peptidase M16, C-terminal VCD_002295 IPR011844 Coenzyme PQQ biosynthesis protein PqqF VCD_002296 IPR029033 Histidine phosphatase superfamily VCD_002296 IPR004449 Phosphohistidine phosphatase SixA VCD_002296 IPR013078 Histidine phosphatase superfamily, clade-1 VCD_002297 IPR042193 FHIPEP, domain 3 VCD_002297 IPR042196 FHIPEP, domain 4 VCD_002297 IPR042194 FHIPEP, domain 1 VCD_002297 IPR025505 FHIPEP conserved site VCD_002297 IPR006301 Flagellar biosynthesis protein FlhA VCD_002297 IPR001712 Type III secretion system FHIPEP VCD_002298 IPR020006 Flagellar biosynthesis protein FlhF VCD_002298 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VCD_002298 IPR003593 AAA+ ATPase domain VCD_002298 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002299 IPR025501 ATP binding protein MinD VCD_002299 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002299 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VCD_002300 IPR007630 RNA polymerase sigma-70 region 4 VCD_002300 IPR013325 RNA polymerase sigma factor, region 2 VCD_002300 IPR007627 RNA polymerase sigma-70 region 2 VCD_002300 IPR000943 RNA polymerase sigma-70 VCD_002300 IPR014284 RNA polymerase sigma-70 like domain VCD_002300 IPR013324 RNA polymerase sigma factor, region 3/4-like VCD_002300 IPR028617 RNA polymerase sigma factor FliA VCD_002300 IPR012845 RNA polymerase sigma factor, FliA/WhiG VCD_002300 IPR007624 RNA polymerase sigma-70 region 3 VCD_002301 IPR001789 Signal transduction response regulator, receiver domain VCD_002301 IPR011006 CheY-like superfamily VCD_002302 IPR007439 Chemotaxis phosphatase, CheZ VCD_002303 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_002303 IPR035891 CheY-binding domain of CheA VCD_002303 IPR036641 HPT domain superfamily VCD_002303 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002303 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002303 IPR002545 CheW-like domain VCD_002303 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002303 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002303 IPR005467 Histidine kinase domain VCD_002303 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily VCD_002303 IPR036061 CheW-like domain superfamily VCD_002303 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding VCD_002303 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily VCD_002303 IPR004105 Histidine kinase CheA-like, homodimeric domain VCD_002304 IPR011006 CheY-like superfamily VCD_002304 IPR001789 Signal transduction response regulator, receiver domain VCD_002304 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type VCD_002304 IPR035909 Methylesterase CheB, C-terminal VCD_002304 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VCD_002305 IPR025669 AAA domain VCD_002305 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002307 IPR036061 CheW-like domain superfamily VCD_002307 IPR002545 CheW-like domain VCD_002307 IPR039315 Chemotaxis protein CheW VCD_002309 IPR017871 ABC transporter, conserved site VCD_002309 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002309 IPR003593 AAA+ ATPase domain VCD_002309 IPR003439 ABC transporter-like VCD_002309 IPR005895 ABC transporter, haem export, CcmA VCD_002310 IPR003544 Cytochrome c-type biogenesis protein CcmB VCD_002310 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VCD_002311 IPR003557 Cytochrome c-type biogenesis protein CcmC VCD_002311 IPR002541 Cytochrome c assembly protein VCD_002312 IPR007078 Haem exporter protein D (CcmD) VCD_002313 IPR004329 CcmE/CycJ protein VCD_002313 IPR036127 CcmE-like superfamily VCD_002314 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VCD_002314 IPR002541 Cytochrome c assembly protein VCD_002314 IPR003567 Cytochrome c-type biogenesis protein VCD_002314 IPR003568 Cytochrome c-type biogenesis protein CcmF VCD_002315 IPR013740 Redoxin VCD_002315 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE VCD_002315 IPR036249 Thioredoxin-like superfamily VCD_002315 IPR013766 Thioredoxin domain VCD_002315 IPR017937 Thioredoxin, conserved site VCD_002316 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_002316 IPR005616 CcmH/CycL/Ccl2/NrfF family VCD_002316 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VCD_002316 IPR013026 Tetratricopeptide repeat-containing domain VCD_002316 IPR019734 Tetratricopeptide repeat VCD_002318 IPR007428 MlaA lipoprotein VCD_002322 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily VCD_002322 IPR019831 Manganese/iron superoxide dismutase, N-terminal VCD_002322 IPR019832 Manganese/iron superoxide dismutase, C-terminal VCD_002322 IPR019833 Manganese/iron superoxide dismutase, binding site VCD_002322 IPR001189 Manganese/iron superoxide dismutase VCD_002322 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily VCD_002323 IPR004480 Monothiol glutaredoxin-related VCD_002323 IPR014434 Monothiol glutaredoxin VCD_002323 IPR036249 Thioredoxin-like superfamily VCD_002323 IPR002109 Glutaredoxin VCD_002323 IPR033658 Glutaredoxin, PICOT-like VCD_002324 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VCD_002324 IPR006171 TOPRIM domain VCD_002324 IPR023405 DNA topoisomerase, type IA, core domain VCD_002324 IPR034144 DNA topoisomerase 3-like, TOPRIM domain VCD_002324 IPR005738 DNA topoisomerase III VCD_002324 IPR000380 DNA topoisomerase, type IA VCD_002324 IPR003601 DNA topoisomerase, type IA, domain 2 VCD_002324 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VCD_002324 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VCD_002324 IPR013497 DNA topoisomerase, type IA, central VCD_002324 IPR023406 DNA topoisomerase, type IA, active site VCD_002324 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VCD_002325 IPR000286 Histone deacetylase family VCD_002325 IPR023696 Ureohydrolase domain superfamily VCD_002325 IPR037138 Histone deacetylase domain superfamily VCD_002325 IPR023801 Histone deacetylase domain VCD_002326 IPR000917 Sulfatase, N-terminal VCD_002326 IPR017850 Alkaline-phosphatase-like, core domain superfamily VCD_002326 IPR024588 Inner membrane protein YejM, N-terminal VCD_002326 IPR012159 Inner membrane protein YejM VCD_002327 IPR023202 YejL-like superfamily VCD_002327 IPR009857 Uncharacterised protein family UPF0352 VCD_002328 IPR007358 Nucleoid-associated protein NdpA VCD_002330 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VCD_002330 IPR004770 Na+/H+ antiporter NhaC VCD_002331 IPR036291 NAD(P)-binding domain superfamily VCD_002331 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VCD_002331 IPR000534 Semialdehyde dehydrogenase, NAD-binding VCD_002331 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type VCD_002331 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VCD_002331 IPR012080 Aspartate-semialdehyde dehydrogenase VCD_002332 IPR002771 Multiple antibiotic resistance (MarC)-related VCD_002334 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase VCD_002334 IPR016161 Aldehyde/histidinol dehydrogenase VCD_002334 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain VCD_002334 IPR015590 Aldehyde dehydrogenase domain VCD_002334 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VCD_002334 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VCD_002334 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_002334 IPR039697 Iron-type alcohol dehydrogenase-like VCD_002334 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_002336 IPR011547 SLC26A/SulP transporter domain VCD_002336 IPR018045 Sulphate anion transporter, conserved site VCD_002336 IPR001902 SLC26A/SulP transporter VCD_002336 IPR002645 STAS domain VCD_002336 IPR036513 STAS domain superfamily VCD_002337 IPR003029 S1 domain VCD_002337 IPR004659 Ribonuclease E/G VCD_002337 IPR028878 Ribonuclease E VCD_002337 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VCD_002337 IPR021968 Polyribonucleotide phosphorylase C-terminal VCD_002337 IPR012340 Nucleic acid-binding, OB-fold VCD_002337 IPR022967 RNA-binding domain, S1 VCD_002339 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VCD_002339 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_002339 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_002339 IPR002942 RNA-binding S4 domain VCD_002339 IPR006225 Pseudouridine synthase, RluC/RluD VCD_002339 IPR036986 RNA-binding S4 domain superfamily VCD_002340 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein VCD_002340 IPR029001 Inosine triphosphate pyrophosphatase-like VCD_002341 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria VCD_002341 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VCD_002342 IPR011332 Zinc-binding ribosomal protein VCD_002342 IPR002677 Ribosomal protein L32p VCD_002343 IPR012281 Phospholipid biosynthesis protein, PlsX-like VCD_002343 IPR003664 Fatty acid synthesis PlsX protein VCD_002344 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCD_002344 IPR016039 Thiolase-like VCD_002344 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VCD_002344 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal VCD_002345 IPR024925 Malonyl CoA-acyl carrier protein transacylase VCD_002345 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type VCD_002345 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VCD_002345 IPR014043 Acyl transferase VCD_002345 IPR001227 Acyl transferase domain superfamily VCD_002345 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VCD_002346 IPR036291 NAD(P)-binding domain superfamily VCD_002346 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase VCD_002346 IPR002347 Short-chain dehydrogenase/reductase SDR VCD_002346 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_002347 IPR006162 Phosphopantetheine attachment site VCD_002347 IPR036736 ACP-like superfamily VCD_002347 IPR003231 Acyl carrier protein (ACP) VCD_002347 IPR009081 Phosphopantetheine binding ACP domain VCD_002348 IPR018201 Beta-ketoacyl synthase, active site VCD_002348 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VCD_002348 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 VCD_002348 IPR016039 Thiolase-like VCD_002348 IPR000794 Beta-ketoacyl synthase VCD_002348 IPR014030 Beta-ketoacyl synthase, N-terminal VCD_002348 IPR014031 Beta-ketoacyl synthase, C-terminal VCD_002349 IPR017824 Aminodeoxychorismate lyase, class IV VCD_002349 IPR036038 Aminotransferase-like, PLP-dependent enzymes VCD_002349 IPR001544 Aminotransferase class IV VCD_002349 IPR018300 Aminotransferase, class IV, conserved site VCD_002350 IPR003770 Endolytic murein transglycosylase VCD_002351 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002351 IPR039430 Thymidylate kinase-like domain VCD_002351 IPR018094 Thymidylate kinase VCD_002351 IPR018095 Thymidylate kinase, conserved site VCD_002352 IPR015199 DNA polymerase III, delta subunit, C-terminal VCD_002352 IPR004622 DNA polymerase III, delta prime subunit VCD_002352 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002353 IPR018228 Deoxyribonuclease, TatD-related, conserved site VCD_002353 IPR032466 Metal-dependent hydrolase VCD_002353 IPR015991 Uncharacterised hydrolase TatD-type VCD_002353 IPR001130 TatD family VCD_002354 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VCD_002354 IPR011299 PTS system glucose-specific IIBC component VCD_002354 IPR001996 Phosphotransferase system, IIB component, type 1 VCD_002354 IPR013013 Phosphotransferase system, EIIC component, type 1 VCD_002354 IPR036878 Glucose permease domain IIB VCD_002354 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VCD_002354 IPR003352 Phosphotransferase system, EIIC VCD_002355 IPR000175 Sodium:neurotransmitter symporter VCD_002355 IPR037272 Sodium:neurotransmitter symporter superfamily VCD_002358 IPR037483 YjjU-like VCD_002358 IPR002641 Patatin-like phospholipase domain VCD_002358 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VCD_002359 IPR015806 Pyruvate kinase, insert domain superfamily VCD_002359 IPR015795 Pyruvate kinase, C-terminal VCD_002359 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_002359 IPR040442 Pyruvate kinase-like domain superfamily VCD_002359 IPR018209 Pyruvate kinase, active site VCD_002359 IPR036918 Pyruvate kinase, C-terminal domain superfamily VCD_002359 IPR001697 Pyruvate kinase VCD_002359 IPR015793 Pyruvate kinase, barrel VCD_002359 IPR011037 Pyruvate kinase-like, insert domain superfamily VCD_002360 IPR000600 ROK family VCD_002360 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002360 IPR036390 Winged helix DNA-binding domain superfamily VCD_002361 IPR002545 CheW-like domain VCD_002361 IPR036061 CheW-like domain superfamily VCD_002361 IPR001789 Signal transduction response regulator, receiver domain VCD_002361 IPR011006 CheY-like superfamily VCD_002361 IPR024181 Chemotaxis response regulator CheV VCD_002364 IPR025714 Methyltransferase domain VCD_002364 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002364 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted VCD_002366 IPR014718 Glycoside hydrolase-type carbohydrate-binding VCD_002366 IPR011013 Galactose mutarotase-like domain superfamily VCD_002366 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VCD_002366 IPR025532 Glucose-6-phosphate 1-epimerase VCD_002367 IPR036291 NAD(P)-binding domain superfamily VCD_002367 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VCD_002367 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VCD_002367 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VCD_002367 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VCD_002367 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VCD_002369 IPR011057 Mss4-like superfamily VCD_002369 IPR002579 Peptide methionine sulphoxide reductase MrsB VCD_002369 IPR028427 Peptide methionine sulfoxide reductase VCD_002372 IPR009749 Protein of unknown function DUF1315 VCD_002373 IPR041725 Type I (cytosolic) L-asparaginase VCD_002373 IPR006033 Type I L-asparaginase family VCD_002373 IPR027475 Asparaginase/glutaminase, active site 2 VCD_002373 IPR036152 Asparaginase/glutaminase-like superfamily VCD_002373 IPR027473 L-asparaginase, C-terminal VCD_002373 IPR027474 L-asparaginase, N-terminal VCD_002373 IPR037152 L-asparaginase, N-terminal domain superfamily VCD_002373 IPR040919 Asparaginase/glutaminase, C-terminal VCD_002373 IPR020827 Asparaginase/glutaminase, active site 1 VCD_002373 IPR006034 Asparaginase/glutaminase-like VCD_002374 IPR029045 ClpP/crotonase-like domain superfamily VCD_002374 IPR004635 Peptidase S49, SppA VCD_002374 IPR002142 Peptidase S49 VCD_002374 IPR033854 Signal peptide peptidase A VCD_002374 IPR004634 Peptidase S49, protease IV VCD_002375 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_002375 IPR013785 Aldolase-type TIM barrel VCD_002375 IPR023753 FAD/NAD(P)-binding domain VCD_002375 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VCD_002376 IPR002912 ACT domain VCD_002376 IPR002376 Formyl transferase, N-terminal VCD_002376 IPR036477 Formyl transferase, N-terminal domain superfamily VCD_002376 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain VCD_002376 IPR004810 Formyltetrahydrofolate deformylase VCD_002378 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type VCD_002378 IPR006935 Helicase/UvrB, N-terminal VCD_002378 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002378 IPR006555 ATP-dependent helicase, C-terminal VCD_002378 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002379 IPR000905 Gcp-like domain VCD_002379 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB VCD_002382 IPR029058 Alpha/Beta hydrolase fold VCD_002382 IPR000073 Alpha/beta hydrolase fold-1 VCD_002382 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase VCD_002383 IPR042099 AMP-dependent synthetase-like superfamily VCD_002383 IPR020845 AMP-binding, conserved site VCD_002383 IPR025110 AMP-binding enzyme, C-terminal domain VCD_002383 IPR000873 AMP-dependent synthetase/ligase VCD_002384 IPR002562 3'-5' exonuclease domain VCD_002384 IPR010997 HRDC-like superfamily VCD_002384 IPR002121 HRDC domain VCD_002384 IPR006292 Ribonuclease D VCD_002384 IPR036397 Ribonuclease H superfamily VCD_002384 IPR012337 Ribonuclease H-like superfamily VCD_002388 IPR026875 Phosphohydrolase-associated domain VCD_002388 IPR006261 dNTP triphosphohydrolase VCD_002388 IPR023023 dNTP triphosphohydrolase, type 2 VCD_002388 IPR003607 HD/PDEase domain VCD_002388 IPR006674 HD domain VCD_002389 IPR022971 5'-deoxynucleotidase YfbR VCD_002389 IPR039356 Metal-dependent nucleoside 5'-monophosphatase VCD_002389 IPR003607 HD/PDEase domain VCD_002390 IPR004839 Aminotransferase, class I/classII VCD_002390 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_002390 IPR015424 Pyridoxal phosphate-dependent transferase VCD_002390 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_002391 IPR034681 Isochorismate synthase MenF VCD_002391 IPR015890 Chorismate-utilising enzyme, C-terminal VCD_002391 IPR004561 Isochorismate synthase VCD_002391 IPR005801 ADC synthase VCD_002392 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VCD_002392 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VCD_002392 IPR029061 Thiamin diphosphate-binding fold VCD_002392 IPR032264 Menaquinone biosynthesis protein MenD, middle domain VCD_002392 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase VCD_002393 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase VCD_002393 IPR029058 Alpha/Beta hydrolase fold VCD_002393 IPR000073 Alpha/beta hydrolase fold-1 VCD_002394 IPR029045 ClpP/crotonase-like domain superfamily VCD_002394 IPR014748 Enoyl-CoA hydratase, C-terminal VCD_002394 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB VCD_002394 IPR001753 Enoyl-CoA hydratase/isomerase VCD_002394 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VCD_002395 IPR029065 Enolase C-terminal domain-like VCD_002395 IPR010196 o-Succinylbenzoate synthase, MenC type1 VCD_002395 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VCD_002395 IPR036849 Enolase-like, C-terminal domain superfamily VCD_002395 IPR029017 Enolase-like, N-terminal VCD_002396 IPR020845 AMP-binding, conserved site VCD_002396 IPR010192 2-succinylbenzoate--CoA ligase VCD_002396 IPR042099 AMP-dependent synthetase-like superfamily VCD_002396 IPR025110 AMP-binding enzyme, C-terminal domain VCD_002396 IPR000873 AMP-dependent synthetase/ligase VCD_002397 IPR004711 Benzoate transporter VCD_002398 IPR011051 RmlC-like cupin domain superfamily VCD_002398 IPR014710 RmlC-like jelly roll fold VCD_002398 IPR001387 Cro/C1-type helix-turn-helix domain VCD_002398 IPR013096 Cupin 2, conserved barrel VCD_002398 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_002399 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_002399 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002399 IPR003660 HAMP domain VCD_002399 IPR004090 Chemotaxis methyl-accepting receptor VCD_002399 IPR000727 Target SNARE coiled-coil homology domain VCD_002400 IPR023727 Lysophospholipid transporter LplT VCD_002400 IPR011701 Major facilitator superfamily VCD_002400 IPR036259 MFS transporter superfamily VCD_002404 IPR007298 Copper resistance lipoprotein NlpE VCD_002405 IPR036707 Cell division topological specificity factor MinE superfamily VCD_002405 IPR005527 Cell division topological specificity factor MinE VCD_002406 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VCD_002406 IPR025501 ATP binding protein MinD VCD_002406 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002406 IPR010223 ATP binding protein MinD, bacterial-type VCD_002407 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VCD_002407 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal VCD_002407 IPR013033 Septum formation inhibitor MinC VCD_002407 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily VCD_002407 IPR007874 Septum formation inhibitor MinC, N-terminal VCD_002407 IPR005526 Septum formation inhibitor MinC, C-terminal VCD_002408 IPR027354 YcgL domain VCD_002408 IPR038068 YcgL-like superfamily VCD_002409 IPR023346 Lysozyme-like domain superfamily VCD_002409 IPR031304 Transglycosylase SLT domain 2 VCD_002409 IPR011757 Lytic transglycosylase MltB VCD_002410 IPR036390 Winged helix DNA-binding domain superfamily VCD_002410 IPR005119 LysR, substrate-binding VCD_002410 IPR000847 Transcription regulator HTH, LysR VCD_002410 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002411 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VCD_002411 IPR011657 Concentrative nucleoside transporter C-terminal domain VCD_002411 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VCD_002411 IPR008276 Concentrative nucleoside transporter VCD_002411 IPR002668 Concentrative nucleoside transporter N-terminal domain VCD_002412 IPR013783 Immunoglobulin-like fold VCD_002412 IPR029070 Chitinase insertion domain superfamily VCD_002412 IPR017853 Glycoside hydrolase superfamily VCD_002412 IPR001579 Glycoside hydrolase, chitinase active site VCD_002412 IPR013784 Carbohydrate-binding-like fold VCD_002412 IPR008969 Carboxypeptidase-like, regulatory domain superfamily VCD_002412 IPR011583 Chitinase II VCD_002412 IPR001223 Glycoside hydrolase family 18, catalytic domain VCD_002413 IPR005126 NapC/NirT cytochrome c, N-terminal VCD_002413 IPR011031 Multihaem cytochrome VCD_002413 IPR036280 Multiheme cytochrome superfamily VCD_002413 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK VCD_002413 IPR038266 NapC/NirT cytochrome c superfamily VCD_002414 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase VCD_002414 IPR006311 Twin-arginine translocation pathway, signal sequence VCD_002414 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VCD_002414 IPR006656 Molybdopterin oxidoreductase VCD_002414 IPR006657 Molybdopterin dinucleotide-binding domain VCD_002414 IPR041460 Molybdopterin oxidoreductase, N-terminal VCD_002414 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain VCD_002414 IPR009010 Aspartate decarboxylase-like domain superfamily VCD_002414 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VCD_002416 IPR005119 LysR, substrate-binding VCD_002416 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002416 IPR000847 Transcription regulator HTH, LysR VCD_002416 IPR036390 Winged helix DNA-binding domain superfamily VCD_002417 IPR002938 FAD-binding domain VCD_002417 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_002418 IPR042098 Taurine dioxygenase TauD-like superfamily VCD_002418 IPR003819 TauD/TfdA-like domain VCD_002420 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VCD_002420 IPR036291 NAD(P)-binding domain superfamily VCD_002420 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site VCD_002420 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VCD_002420 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase VCD_002427 IPR000374 Phosphatidate cytidylyltransferase VCD_002429 IPR035919 EAL domain superfamily VCD_002429 IPR000014 PAS domain VCD_002429 IPR029787 Nucleotide cyclase VCD_002429 IPR005330 MHYT domain VCD_002429 IPR000160 GGDEF domain VCD_002429 IPR035965 PAS domain superfamily VCD_002429 IPR001633 EAL domain VCD_002432 IPR003846 Protein adenylyltransferase SelO VCD_002434 IPR038404 TRAP transporter solute receptor DctP superfamily VCD_002434 IPR004682 TRAP transporter solute receptor, DctP family VCD_002434 IPR018389 TRAP transporter solute receptor DctP/TeaA VCD_002435 IPR007387 TRAP transporter, small membrane protein DctQ VCD_002436 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VCD_002436 IPR004681 TRAP transporter large membrane protein DctM VCD_002437 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_002437 IPR009057 Homeobox-like domain superfamily VCD_002437 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002437 IPR003593 AAA+ ATPase domain VCD_002437 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_002437 IPR001789 Signal transduction response regulator, receiver domain VCD_002437 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_002437 IPR025944 Sigma-54 interaction domain, conserved site VCD_002437 IPR011006 CheY-like superfamily VCD_002437 IPR002197 DNA binding HTH domain, Fis-type VCD_002438 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002438 IPR033479 Double Cache domain 1 VCD_002438 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VCD_002438 IPR029151 Periplasmic sensor-like domain superfamily VCD_002438 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002438 IPR005467 Histidine kinase domain VCD_002438 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002438 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002438 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_002439 IPR036611 Trigger factor ribosome-binding domain superfamily VCD_002439 IPR008881 Trigger factor, ribosome-binding, bacterial VCD_002439 IPR037041 Trigger factor, C-terminal domain superfamily VCD_002439 IPR008880 Trigger factor, C-terminal VCD_002439 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VCD_002439 IPR005215 Trigger factor VCD_002439 IPR027304 Trigger factor/SurA domain superfamily VCD_002440 IPR018215 ClpP, Ser active site VCD_002440 IPR033135 ClpP, histidine active site VCD_002440 IPR001907 ATP-dependent Clp protease proteolytic subunit VCD_002440 IPR029045 ClpP/crotonase-like domain superfamily VCD_002440 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VCD_002441 IPR038366 Zinc finger, ClpX C4-type superfamily VCD_002441 IPR010603 Zinc finger, ClpX C4-type VCD_002441 IPR003959 ATPase, AAA-type, core VCD_002441 IPR019489 Clp ATPase, C-terminal VCD_002441 IPR004487 Clp protease, ATP-binding subunit ClpX VCD_002441 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002441 IPR003593 AAA+ ATPase domain VCD_002442 IPR027065 Lon protease VCD_002442 IPR008269 Peptidase S16, Lon proteolytic domain VCD_002442 IPR004815 Lon protease, bacterial/eukaryotic-type VCD_002442 IPR003593 AAA+ ATPase domain VCD_002442 IPR003959 ATPase, AAA-type, core VCD_002442 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002442 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_002442 IPR015947 PUA-like superfamily VCD_002442 IPR027543 Lon protease, bacterial VCD_002442 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_002442 IPR003111 Lon, substrate-binding domain VCD_002443 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VCD_002443 IPR000119 Histone-like DNA-binding protein VCD_002443 IPR020816 Histone-like DNA-binding protein, conserved site VCD_002444 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VCD_002444 IPR027304 Trigger factor/SurA domain superfamily VCD_002444 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VCD_002445 IPR010994 RuvA domain 2-like VCD_002445 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VCD_002445 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VCD_002446 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002446 IPR011994 Cytidylate kinase domain VCD_002446 IPR003136 Cytidylate kinase VCD_002447 IPR000110 Ribosomal protein S1 VCD_002447 IPR012340 Nucleic acid-binding, OB-fold VCD_002447 IPR022967 RNA-binding domain, S1 VCD_002447 IPR003029 S1 domain VCD_002448 IPR005685 Integration host factor, beta subunit VCD_002448 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VCD_002448 IPR020816 Histone-like DNA-binding protein, conserved site VCD_002448 IPR000119 Histone-like DNA-binding protein VCD_002449 IPR010445 Lipopolysaccharide assembly protein A domain VCD_002449 IPR032906 Lipopolysaccharide assembly protein A VCD_002450 IPR013026 Tetratricopeptide repeat-containing domain VCD_002450 IPR041166 LapB, rubredoxin metal binding domain VCD_002450 IPR030865 Lipopolysaccharide assembly protein B VCD_002450 IPR019734 Tetratricopeptide repeat VCD_002450 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_002451 IPR014732 Orotidine 5'-phosphate decarboxylase VCD_002451 IPR013785 Aldolase-type TIM barrel VCD_002451 IPR018089 Orotidine 5'-phosphate decarboxylase, active site VCD_002451 IPR001754 Orotidine 5'-phosphate decarboxylase domain VCD_002451 IPR011060 Ribulose-phosphate binding barrel VCD_002452 IPR012347 Ferritin-like VCD_002452 IPR010386 tRNA-hydroxylase MiaE VCD_002452 IPR009078 Ferritin-like superfamily VCD_002455 IPR000847 Transcription regulator HTH, LysR VCD_002455 IPR005119 LysR, substrate-binding VCD_002455 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002455 IPR036390 Winged helix DNA-binding domain superfamily VCD_002457 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 VCD_002457 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VCD_002457 IPR036291 NAD(P)-binding domain superfamily VCD_002457 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VCD_002457 IPR008141 Alanine dehydrogenase VCD_002458 IPR011991 ArsR-like helix-turn-helix domain VCD_002458 IPR000485 AsnC-type HTH domain VCD_002458 IPR036390 Winged helix DNA-binding domain superfamily VCD_002458 IPR019888 Transcription regulator AsnC-type VCD_002458 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCD_002458 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VCD_002458 IPR011008 Dimeric alpha-beta barrel VCD_002458 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002459 IPR036390 Winged helix DNA-binding domain superfamily VCD_002459 IPR025199 DNA translocase FtsK, 4TM region VCD_002459 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002459 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002459 IPR041027 FtsK alpha domain VCD_002459 IPR002543 FtsK domain VCD_002459 IPR018541 FtsK gamma domain VCD_002460 IPR022920 Disulphide bond formation protein DsbB VCD_002460 IPR023380 DsbB-like superfamily VCD_002460 IPR003752 Disulphide bond formation protein DsbB/BdbC VCD_002461 IPR004671 Na+/H+ antiporter NhaB VCD_002462 IPR036390 Winged helix DNA-binding domain superfamily VCD_002462 IPR008920 Transcription regulator FadR/GntR, C-terminal VCD_002462 IPR000524 Transcription regulator HTH, GntR VCD_002462 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002462 IPR014178 Fatty acid response transcription factor FadR VCD_002462 IPR028374 FadR, C-terminal domain VCD_002464 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002464 IPR003660 HAMP domain VCD_002464 IPR004090 Chemotaxis methyl-accepting receptor VCD_002465 IPR011146 HIT-like domain VCD_002465 IPR019808 Histidine triad, conserved site VCD_002465 IPR036265 HIT-like superfamily VCD_002465 IPR001310 Histidine triad (HIT) protein VCD_002468 IPR014094 Penicillin-binding protein activator LpoB VCD_002468 IPR012640 Membrane lipoprotein, lipid attachment site VCD_002470 IPR029058 Alpha/Beta hydrolase fold VCD_002470 IPR022987 Uncharacterised protein family UPF0227 VCD_002470 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VCD_002471 IPR023753 FAD/NAD(P)-binding domain VCD_002471 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_002473 IPR000772 Ricin B, lectin domain VCD_002473 IPR035992 Ricin B-like lectins VCD_002473 IPR036435 Leukocidin/porin MspA superfamily VCD_002473 IPR016183 Leukocidin/Hemolysin toxin VCD_002473 IPR022220 Hemolytic toxin, N-terminal VCD_002473 IPR036404 Jacalin-like lectin domain superfamily VCD_002473 IPR032496 Hemolysin, beta-prism lectin VCD_002475 IPR001650 Helicase, C-terminal VCD_002475 IPR041471 UvrB, interaction domain VCD_002475 IPR005118 Transcription-repair-coupling factor, C-terminal domain VCD_002475 IPR037235 TRCF-like, C-terminal domain VCD_002475 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002475 IPR004576 Transcription-repair coupling factor VCD_002475 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002475 IPR036101 CarD-like/TRCF domain superfamily VCD_002475 IPR003711 CarD-like/TRCF domain VCD_002475 IPR011545 DEAD/DEAH box helicase domain VCD_002477 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E VCD_002477 IPR003838 ABC transporter permease protein domain VCD_002477 IPR025857 MacB-like periplasmic core domain VCD_002478 IPR003439 ABC transporter-like VCD_002478 IPR017871 ABC transporter, conserved site VCD_002478 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002478 IPR003593 AAA+ ATPase domain VCD_002478 IPR011924 Lipoprotein releasing system, ATP-binding protein VCD_002478 IPR015854 ABC transporter, lipoprotein release, LolD VCD_002479 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type VCD_002479 IPR025857 MacB-like periplasmic core domain VCD_002479 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E VCD_002479 IPR003838 ABC transporter permease protein domain VCD_002482 IPR004477 ComEC/Rec2-related protein VCD_002482 IPR035681 ComA-like, MBL domain VCD_002482 IPR001279 Metallo-beta-lactamase VCD_002482 IPR004797 Competence protein ComEC/Rec2 VCD_002482 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VCD_002482 IPR025405 Domain of unknown function DUF4131 VCD_002483 IPR003439 ABC transporter-like VCD_002483 IPR039421 Type I protein exporter VCD_002483 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002483 IPR011917 ABC transporter, lipid A export, MsbA VCD_002483 IPR003593 AAA+ ATPase domain VCD_002483 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_002483 IPR011527 ABC transporter type 1, transmembrane domain VCD_002483 IPR017871 ABC transporter, conserved site VCD_002485 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002485 IPR003758 Tetraacyldisaccharide 4'-kinase VCD_002486 IPR005651 Trm112-like VCD_002487 IPR003329 Acylneuraminate cytidylyltransferase VCD_002487 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase VCD_002487 IPR029044 Nucleotide-diphospho-sugar transferases VCD_002488 IPR007390 Sporulation stage V, protein R VCD_002489 IPR006698 Uncharacterised protein family UPF0229 VCD_002490 IPR013153 PrkA AAA domain VCD_002490 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002490 IPR010650 PrkA C-terminal domain VCD_002490 IPR016230 Serine-protein kinase, PrkA VCD_002491 IPR023145 YfbU, helix-hairpin domain superfamily VCD_002491 IPR005587 Uncharacterised protein family UPF0304, YfbU VCD_002491 IPR023146 YfbU, alpha-helical bundle domain superfamily VCD_002493 IPR012838 Pyruvate formate-lyase 1 activating enzyme VCD_002493 IPR007197 Radical SAM VCD_002493 IPR012839 Organic radical enzyme activase VCD_002493 IPR034457 Organic radical-activating enzymes VCD_002493 IPR013785 Aldolase-type TIM barrel VCD_002493 IPR001989 Radical-activating enzyme, conserved site VCD_002493 IPR034465 Pyruvate formate-lyase activase VCD_002494 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002494 IPR000727 Target SNARE coiled-coil homology domain VCD_002494 IPR003660 HAMP domain VCD_002494 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_002494 IPR004090 Chemotaxis methyl-accepting receptor VCD_002496 IPR001150 Glycine radical domain VCD_002496 IPR005949 Formate acetyltransferase VCD_002496 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VCD_002496 IPR004184 Pyruvate formate lyase domain VCD_002498 IPR017871 ABC transporter, conserved site VCD_002498 IPR003593 AAA+ ATPase domain VCD_002498 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002498 IPR003439 ABC transporter-like VCD_002498 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VCD_002499 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VCD_002499 IPR018313 Solute-binding protein family 3, conserved site VCD_002499 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_002500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002500 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_002500 IPR035906 MetI-like superfamily VCD_002500 IPR030199 Histidine transport system permease protein HisQ VCD_002501 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002501 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_002501 IPR035906 MetI-like superfamily VCD_002502 IPR005135 Endonuclease/exonuclease/phosphatase VCD_002502 IPR037493 Exodeoxyribonuclease III-like VCD_002502 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VCD_002502 IPR020848 AP endonuclease 1, conserved site VCD_002502 IPR004808 AP endonuclease 1 VCD_002502 IPR020847 AP endonuclease 1, binding site VCD_002509 IPR021810 Protein of unknown function DUF3387 VCD_002509 IPR004473 Restriction endonuclease, type I, HsdR VCD_002509 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002509 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002509 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VCD_002509 IPR040980 SWI2/SNF2 ATPase VCD_002511 IPR003356 DNA methylase, adenine-specific VCD_002511 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VCD_002511 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002514 IPR017508 HipA, N-terminal subdomain 1 VCD_002514 IPR012893 HipA-like, C-terminal VCD_002517 IPR003660 HAMP domain VCD_002517 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002518 IPR019630 Protein of unknown function DUF2496, YbaM-related VCD_002519 IPR038338 PriB/PriC superfamily VCD_002519 IPR010890 Primosomal replication PriB/PriC VCD_002520 IPR002781 Transmembrane protein TauE-like VCD_002521 IPR010614 DEAD2 VCD_002521 IPR039000 ATP-dependent DNA helicase DinG VCD_002521 IPR006555 ATP-dependent helicase, C-terminal VCD_002521 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type VCD_002521 IPR001650 Helicase, C-terminal VCD_002521 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002522 IPR023614 Porin domain superfamily VCD_002522 IPR033900 Porin domain, Gram-negative type VCD_002523 IPR018635 Uncharacterised protein family UPF0319 VCD_002524 IPR023006 Uncharacterised protein family UPF0225 VCD_002524 IPR032710 NTF2-like domain superfamily VCD_002524 IPR004027 SEC-C motif VCD_002525 IPR013976 Metal-dependent hydrolase HDOD VCD_002525 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VCD_002525 IPR001633 EAL domain VCD_002525 IPR035919 EAL domain superfamily VCD_002526 IPR010138 UDP-2,3-diacylglucosamine hydrolase VCD_002526 IPR029052 Metallo-dependent phosphatase-like VCD_002526 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VCD_002527 IPR029000 Cyclophilin-like domain superfamily VCD_002527 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VCD_002527 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VCD_002527 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VCD_002528 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VCD_002528 IPR015803 Cysteine-tRNA ligase VCD_002528 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR VCD_002528 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase VCD_002528 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002528 IPR032678 tRNA synthetases class I, catalytic domain VCD_002529 IPR036397 Ribonuclease H superfamily VCD_002529 IPR002176 Crossover junction endodeoxyribonuclease RuvC VCD_002529 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site VCD_002529 IPR012337 Ribonuclease H-like superfamily VCD_002530 IPR010994 RuvA domain 2-like VCD_002530 IPR036267 RuvA, C-terminal domain superfamily VCD_002530 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial VCD_002530 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VCD_002530 IPR000085 Bacterial DNA recombination protein RuvA VCD_002530 IPR011114 Holliday junction DNA helicase RuvA, C-terminal VCD_002530 IPR012340 Nucleic acid-binding, OB-fold VCD_002531 IPR008824 RuvB-like P-loop domain VCD_002531 IPR003593 AAA+ ATPase domain VCD_002531 IPR041445 RuvB, AAA lid domain VCD_002531 IPR004605 DNA helicase, Holliday junction RuvB-type VCD_002531 IPR008823 RuvB C-terminal winged helix domain VCD_002531 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002531 IPR036390 Winged helix DNA-binding domain superfamily VCD_002531 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002532 IPR002585 Cytochrome ubiquinol oxidase subunit 1 VCD_002533 IPR003317 Cytochrome ubiquinol oxidase subunit 2 VCD_002534 IPR012994 Membrane bound YbgT-like VCD_002534 IPR011724 Cyd operon protein YbgT VCD_002535 IPR011846 Cyd operon protein YbgE VCD_002537 IPR014163 Tol-Pal system, TolQ VCD_002537 IPR002898 MotA/TolQ/ExbB proton channel VCD_002538 IPR003400 Biopolymer transport protein ExbD/TolR VCD_002538 IPR014168 Tol-Pal system protein TolR VCD_002540 IPR011042 Six-bladed beta-propeller, TolB-like VCD_002540 IPR011659 WD40-like Beta Propeller VCD_002540 IPR014167 Tol-Pal system protein TolB VCD_002540 IPR007195 TolB, N-terminal VCD_002540 IPR036752 TolB, N-terminal domain superfamily VCD_002541 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal VCD_002541 IPR006665 OmpA-like domain VCD_002541 IPR039001 Peptidoglycan-associated lipoprotein VCD_002541 IPR006690 Outer membrane protein, OmpA-like, conserved site VCD_002541 IPR006664 Outer membrane protein, bacterial VCD_002541 IPR036737 OmpA-like domain superfamily VCD_002543 IPR003473 Quinolinate synthetase A VCD_002543 IPR036094 Quinolinate synthetase A superfamily VCD_002543 IPR023513 Quinolinate synthase A, type 1 VCD_002545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_002545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002545 IPR015387 LuxQ, periplasmic VCD_002545 IPR029151 Periplasmic sensor-like domain superfamily VCD_002545 IPR001789 Signal transduction response regulator, receiver domain VCD_002545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002545 IPR011006 CheY-like superfamily VCD_002545 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002545 IPR005467 Histidine kinase domain VCD_002546 IPR010574 L-alanine exporter AlaE VCD_002547 IPR016305 Mannose-6-phosphate isomerase VCD_002547 IPR018050 Phosphomannose isomerase, type I, conserved site VCD_002547 IPR014710 RmlC-like jelly roll fold VCD_002547 IPR011051 RmlC-like cupin domain superfamily VCD_002547 IPR001250 Mannose-6-phosphate isomerase, type I VCD_002548 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VCD_002548 IPR002178 PTS EIIA type-2 domain VCD_002548 IPR013014 Phosphotransferase system, EIIC component, type 2 VCD_002548 IPR004715 Phosphotransferase system, IIA component fructose subfamily VCD_002548 IPR006327 Phosphotransferase system, fructose IIC component VCD_002548 IPR003352 Phosphotransferase system, EIIC VCD_002548 IPR016152 Phosphotransferase/anion transporter VCD_002548 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VCD_002548 IPR036095 PTS system IIB component-like superfamily VCD_002548 IPR013011 Phosphotransferase system, EIIB component, type 2 VCD_002549 IPR018060 DNA binding HTH domain, AraC-type VCD_002549 IPR009057 Homeobox-like domain superfamily VCD_002549 IPR020449 Transcription regulator HTH, AraC- type VCD_002549 IPR018062 HTH domain AraC-type, conserved site VCD_002551 IPR013011 Phosphotransferase system, EIIB component, type 2 VCD_002551 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VCD_002551 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VCD_002551 IPR036095 PTS system IIB component-like superfamily VCD_002552 IPR013014 Phosphotransferase system, EIIC component, type 2 VCD_002552 IPR006327 Phosphotransferase system, fructose IIC component VCD_002553 IPR006327 Phosphotransferase system, fructose IIC component VCD_002553 IPR013014 Phosphotransferase system, EIIC component, type 2 VCD_002555 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_002555 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VCD_002555 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_002555 IPR015590 Aldehyde dehydrogenase domain VCD_002555 IPR016161 Aldehyde/histidinol dehydrogenase VCD_002555 IPR016160 Aldehyde dehydrogenase, cysteine active site VCD_002557 IPR003018 GAF domain VCD_002557 IPR003593 AAA+ ATPase domain VCD_002557 IPR009057 Homeobox-like domain superfamily VCD_002557 IPR002197 DNA binding HTH domain, Fis-type VCD_002557 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002557 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_002557 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_002557 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_002557 IPR025944 Sigma-54 interaction domain, conserved site VCD_002557 IPR029016 GAF-like domain superfamily VCD_002558 IPR036361 SAP domain superfamily VCD_002558 IPR018668 DNA-binding protein VF530-like VCD_002560 IPR006050 DNA photolyase, N-terminal VCD_002560 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily VCD_002560 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VCD_002560 IPR002081 Cryptochrome/DNA photolyase class 1 VCD_002560 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VCD_002560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002560 IPR014133 Cryptochrome DASH VCD_002573 IPR003593 AAA+ ATPase domain VCD_002573 IPR017871 ABC transporter, conserved site VCD_002573 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002573 IPR003439 ABC transporter-like VCD_002580 IPR013491 Caudovirus, tape measure, N-terminal VCD_002581 IPR002514 Transposase IS3/IS911family VCD_002581 IPR009057 Homeobox-like domain superfamily VCD_002582 IPR036397 Ribonuclease H superfamily VCD_002582 IPR012337 Ribonuclease H-like superfamily VCD_002582 IPR001584 Integrase, catalytic core VCD_002582 IPR038965 Transposase InsF-like VCD_002585 IPR025657 RadC-like JAB domain VCD_002585 IPR020891 Uncharacterised protein family UPF0758, conserved site VCD_002585 IPR001405 Uncharacterised protein family UPF0758 VCD_002585 IPR037518 MPN domain VCD_002587 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VCD_002587 IPR015344 Vibrio cholerae neuraminidase, lectin-like domain VCD_002587 IPR036278 Sialidase superfamily VCD_002587 IPR026856 Sialidase family VCD_002587 IPR011040 Sialidase VCD_002588 IPR006680 Amidohydrolase-related VCD_002588 IPR032466 Metal-dependent hydrolase VCD_002588 IPR011059 Metal-dependent hydrolase, composite domain superfamily VCD_002588 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VCD_002589 IPR000600 ROK family VCD_002589 IPR023945 N-acetylmannosamine kinase, bacterial VCD_002590 IPR011060 Ribulose-phosphate binding barrel VCD_002590 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase VCD_002590 IPR013785 Aldolase-type TIM barrel VCD_002591 IPR018389 TRAP transporter solute receptor DctP/TeaA VCD_002591 IPR004682 TRAP transporter solute receptor, DctP family VCD_002591 IPR038404 TRAP transporter solute receptor DctP superfamily VCD_002592 IPR007387 TRAP transporter, small membrane protein DctQ VCD_002593 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VCD_002593 IPR004681 TRAP transporter large membrane protein DctM VCD_002594 IPR020625 Schiff base-forming aldolase, active site VCD_002594 IPR005264 N-acetylneuraminate lyase VCD_002594 IPR002220 DapA-like VCD_002594 IPR013785 Aldolase-type TIM barrel VCD_002595 IPR035472 RpiR-like, SIS domain VCD_002595 IPR001347 Sugar isomerase (SIS) VCD_002595 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002595 IPR009057 Homeobox-like domain superfamily VCD_002595 IPR000281 Helix-turn-helix protein RpiR VCD_002596 IPR006652 Kelch repeat type 1 VCD_002596 IPR019936 Mutatrotase, YjhT-like VCD_002596 IPR015915 Kelch-type beta propeller VCD_002597 IPR015915 Kelch-type beta propeller VCD_002597 IPR011498 Kelch repeat type 2 VCD_002597 IPR019936 Mutatrotase, YjhT-like VCD_002601 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002601 IPR003356 DNA methylase, adenine-specific VCD_002601 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VCD_002605 IPR021810 Protein of unknown function DUF3387 VCD_002605 IPR040980 SWI2/SNF2 ATPase VCD_002605 IPR004473 Restriction endonuclease, type I, HsdR VCD_002605 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VCD_002605 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002605 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002616 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002616 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002616 IPR021810 Protein of unknown function DUF3387 VCD_002616 IPR040980 SWI2/SNF2 ATPase VCD_002616 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VCD_002616 IPR004473 Restriction endonuclease, type I, HsdR VCD_002618 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VCD_002618 IPR003356 DNA methylase, adenine-specific VCD_002618 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002621 IPR017508 HipA, N-terminal subdomain 1 VCD_002621 IPR012893 HipA-like, C-terminal VCD_002624 IPR038718 SNF2-like, N-terminal domain superfamily VCD_002624 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002624 IPR000330 SNF2-related, N-terminal domain VCD_002624 IPR001650 Helicase, C-terminal VCD_002624 IPR022138 Helicase SWF/SNF-related VCD_002624 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002625 IPR013762 Integrase-like, catalytic domain superfamily VCD_002625 IPR011010 DNA breaking-rejoining enzyme, catalytic core VCD_002625 IPR002104 Integrase, catalytic domain VCD_002625 IPR038488 Integrase, DNA-binding domain superfamily VCD_002625 IPR025166 Integrase, DNA-binding domain VCD_002625 IPR010998 Integrase/recombinase, N-terminal VCD_002626 IPR010998 Integrase/recombinase, N-terminal VCD_002626 IPR011010 DNA breaking-rejoining enzyme, catalytic core VCD_002626 IPR002104 Integrase, catalytic domain VCD_002626 IPR025166 Integrase, DNA-binding domain VCD_002626 IPR038488 Integrase, DNA-binding domain superfamily VCD_002626 IPR013762 Integrase-like, catalytic domain superfamily VCD_002627 IPR001036 Acriflavin resistance protein VCD_002627 IPR022831 Multidrug resistance protein MdtB VCD_002627 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCD_002628 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCD_002628 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG VCD_002630 IPR003399 Mce/MlaD VCD_002631 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VCD_002631 IPR007498 Intermembrane transport protein PqiA-like VCD_002632 IPR010920 LSM domain superfamily VCD_002632 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VCD_002632 IPR006686 Mechanosensitive ion channel MscS, conserved site VCD_002632 IPR011066 Mechanosensitive ion channel MscS, C-terminal VCD_002632 IPR006685 Mechanosensitive ion channel MscS VCD_002632 IPR008910 Conserved TM helix VCD_002632 IPR023408 Mechanosensitive ion channel MscS domain superfamily VCD_002636 IPR009057 Homeobox-like domain superfamily VCD_002636 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VCD_002636 IPR019915 Transcription regulator, pyrimidine utilisation, RutR VCD_002636 IPR013573 Transcription regulator YcdC, C-terminal VCD_002636 IPR001647 DNA-binding HTH domain, TetR-type VCD_002637 IPR015590 Aldehyde dehydrogenase domain VCD_002637 IPR016161 Aldehyde/histidinol dehydrogenase VCD_002637 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_002637 IPR016160 Aldehyde dehydrogenase, cysteine active site VCD_002637 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VCD_002637 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_002637 IPR010102 Succinate semialdehyde dehydrogenase VCD_002638 IPR009971 Protein of unknown function DUF1496 VCD_002640 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VCD_002640 IPR032551 HTH-type transcriptional repressor, C-terminal VCD_002640 IPR001647 DNA-binding HTH domain, TetR-type VCD_002640 IPR009057 Homeobox-like domain superfamily VCD_002640 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VCD_002641 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VCD_002641 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VCD_002641 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VCD_002641 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VCD_002641 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VCD_002641 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VCD_002641 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VCD_002642 IPR024906 Enoyl reductase FAD binding domain VCD_002642 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VCD_002642 IPR010758 Trans-2-enoyl-CoA reductase VCD_002643 IPR004368 Translation initiation factor IF-1 VCD_002643 IPR022967 RNA-binding domain, S1 VCD_002643 IPR006196 RNA-binding domain, S1, IF1 type VCD_002643 IPR012340 Nucleic acid-binding, OB-fold VCD_002644 IPR016181 Acyl-CoA N-acyltransferase VCD_002644 IPR017138 Aspartate/glutamate leucyltransferase VCD_002644 IPR030700 N-end rule aminoacyl transferase VCD_002644 IPR007472 N-end rule aminoacyl transferase, C-terminal VCD_002644 IPR007471 N-end aminoacyl transferase, N-terminal VCD_002645 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal VCD_002645 IPR016181 Acyl-CoA N-acyltransferase VCD_002645 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase VCD_002647 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase VCD_002647 IPR036968 Enolpyruvate transferase domain superfamily VCD_002647 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VCD_002647 IPR001986 Enolpyruvate transferase domain VCD_002647 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site VCD_002648 IPR038191 YciN superfamily VCD_002648 IPR019633 Protein of unknown function DUF2498 VCD_002649 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type VCD_002649 IPR028612 DNA topoisomerase I, type IA VCD_002649 IPR034149 DNA topoisomerase 1, TOPRIM domain VCD_002649 IPR023406 DNA topoisomerase, type IA, active site VCD_002649 IPR013497 DNA topoisomerase, type IA, central VCD_002649 IPR005733 DNA topoisomerase I, bacterial-type VCD_002649 IPR006171 TOPRIM domain VCD_002649 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VCD_002649 IPR023405 DNA topoisomerase, type IA, core domain VCD_002649 IPR000380 DNA topoisomerase, type IA VCD_002649 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VCD_002649 IPR013498 DNA topoisomerase, type IA, zn finger VCD_002649 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VCD_002649 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VCD_002649 IPR003601 DNA topoisomerase, type IA, domain 2 VCD_002651 IPR005835 Nucleotidyl transferase domain VCD_002651 IPR029044 Nucleotide-diphospho-sugar transferases VCD_002651 IPR005836 ADP-glucose pyrophosphorylase, conserved site VCD_002651 IPR011004 Trimeric LpxA-like superfamily VCD_002651 IPR011831 Glucose-1-phosphate adenylyltransferase VCD_002651 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial VCD_002652 IPR011835 Bacterial/plant glycogen synthase VCD_002652 IPR001296 Glycosyl transferase, family 1 VCD_002652 IPR013534 Starch synthase, catalytic domain VCD_002657 IPR026256 Transcriptional regulator, TfoX/Sxy-type VCD_002657 IPR007077 TfoX, C-terminal VCD_002657 IPR007076 TfoX, N-terminal VCD_002658 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_002658 IPR000843 LacI-type HTH domain VCD_002658 IPR028082 Periplasmic binding protein-like I VCD_002658 IPR023588 Transcription regulator HTH, PurR VCD_002659 IPR036386 HscB, C-terminal domain superfamily VCD_002659 IPR020945 DMSO/Nitrate reductase chaperone VCD_002659 IPR036411 TorD-like superfamily VCD_002659 IPR023069 Chaperone TorD VCD_002660 IPR011006 CheY-like superfamily VCD_002660 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_002660 IPR001789 Signal transduction response regulator, receiver domain VCD_002660 IPR039420 Transcriptional regulatory protein WalR-like VCD_002660 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002661 IPR003848 Domain of unknown function DUF218 VCD_002662 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase VCD_002662 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002663 IPR033440 Chromosome partition protein MukF, middle domain VCD_002663 IPR038198 MukF, C-terminal domain superfamily VCD_002663 IPR036141 MukF, middle domain superfamily VCD_002663 IPR033439 Chromosome partition protein MukF, winged-helix domain VCD_002663 IPR033441 Chromosome partition protein MukF, C-terminal domain VCD_002663 IPR005582 Chromosome partition protein MukF VCD_002663 IPR036390 Winged helix DNA-binding domain superfamily VCD_002663 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002664 IPR042037 MukE, C-terminal domain VCD_002664 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE VCD_002664 IPR042038 MukE, N-terminal domain VCD_002665 IPR007406 MukB, N-terminal domain VCD_002665 IPR012090 Chromosome partition protein MukB VCD_002665 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002665 IPR032520 MukB, hinge domain VCD_002666 IPR011991 ArsR-like helix-turn-helix domain VCD_002666 IPR036390 Winged helix DNA-binding domain superfamily VCD_002666 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002666 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VCD_002666 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCD_002666 IPR019888 Transcription regulator AsnC-type VCD_002666 IPR011008 Dimeric alpha-beta barrel VCD_002666 IPR000485 AsnC-type HTH domain VCD_002667 IPR001123 Amino acid exporter protein, LeuE-type VCD_002668 IPR023404 Radical SAM, alpha/beta horseshoe VCD_002668 IPR024560 Uncharacterised protein family UPF0313, C-terminal VCD_002668 IPR007197 Radical SAM VCD_002668 IPR020612 Methylthiotransferase, conserved site VCD_002668 IPR022946 Uncharacterised protein family UPF0313 VCD_002668 IPR006638 Elp3/MiaB/NifB VCD_002668 IPR013704 Uncharacterised protein family UPF0313, N-terminal VCD_002669 IPR005330 MHYT domain VCD_002669 IPR029787 Nucleotide cyclase VCD_002669 IPR035919 EAL domain superfamily VCD_002669 IPR001633 EAL domain VCD_002669 IPR000160 GGDEF domain VCD_002670 IPR007863 Peptidase M16, C-terminal VCD_002670 IPR001431 Peptidase M16, zinc-binding site VCD_002670 IPR011765 Peptidase M16, N-terminal VCD_002670 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VCD_002673 IPR005119 LysR, substrate-binding VCD_002673 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain VCD_002673 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002673 IPR000847 Transcription regulator HTH, LysR VCD_002673 IPR036390 Winged helix DNA-binding domain superfamily VCD_002674 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal VCD_002674 IPR038071 UROD/MetE-like superfamily VCD_002674 IPR006276 Cobalamin-independent methionine synthase VCD_002674 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal VCD_002676 IPR005545 YCII-related VCD_002676 IPR011008 Dimeric alpha-beta barrel VCD_002677 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain VCD_002677 IPR029069 HotDog domain superfamily VCD_002677 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase VCD_002677 IPR006683 Thioesterase domain VCD_002678 IPR006008 Intracellular septation protein A VCD_002680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002680 IPR003848 Domain of unknown function DUF218 VCD_002681 IPR036291 NAD(P)-binding domain superfamily VCD_002681 IPR001509 NAD-dependent epimerase/dehydratase VCD_002683 IPR000292 Formate/nitrite transporter VCD_002683 IPR024002 Formate/nitrite transporter, conserved site VCD_002683 IPR023999 Formate transporter FocA, putative VCD_002683 IPR023271 Aquaporin-like VCD_002684 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VCD_002684 IPR004448 Nitrate reductas, NapE, periplasmic VCD_002685 IPR005126 NapC/NirT cytochrome c, N-terminal VCD_002685 IPR024717 Denitrification system component NapC/NirT/NrfH VCD_002685 IPR036280 Multiheme cytochrome superfamily VCD_002685 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT VCD_002685 IPR011031 Multihaem cytochrome VCD_002685 IPR038266 NapC/NirT cytochrome c superfamily VCD_002686 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VCD_002686 IPR011887 Trimethylamine-N-oxide reductase TorA VCD_002686 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VCD_002686 IPR006656 Molybdopterin oxidoreductase VCD_002686 IPR009010 Aspartate decarboxylase-like domain superfamily VCD_002686 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain VCD_002686 IPR006311 Twin-arginine translocation pathway, signal sequence VCD_002686 IPR041460 Molybdopterin oxidoreductase, N-terminal VCD_002686 IPR006657 Molybdopterin dinucleotide-binding domain VCD_002690 IPR001667 DDH domain VCD_002690 IPR004097 DHHA2 domain VCD_002690 IPR038222 DHHA2 domain superfamily VCD_002690 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable VCD_002690 IPR038763 DHH phosphoesterase superfamily VCD_002693 IPR003593 AAA+ ATPase domain VCD_002693 IPR003439 ABC transporter-like VCD_002693 IPR017871 ABC transporter, conserved site VCD_002693 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002694 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002694 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_002694 IPR003439 ABC transporter-like VCD_002694 IPR003593 AAA+ ATPase domain VCD_002695 IPR035906 MetI-like superfamily VCD_002695 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCD_002695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002696 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002696 IPR035906 MetI-like superfamily VCD_002697 IPR039424 Solute-binding protein family 5 VCD_002697 IPR000914 Solute-binding protein family 5 domain VCD_002697 IPR023765 Solute-binding protein family 5, conserved site VCD_002697 IPR030678 Peptide/nickel binding protein, MppA-type VCD_002698 IPR003593 AAA+ ATPase domain VCD_002698 IPR014317 Transcription activator PspF VCD_002698 IPR009057 Homeobox-like domain superfamily VCD_002698 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002698 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_002698 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_002698 IPR025944 Sigma-54 interaction domain, conserved site VCD_002698 IPR002197 DNA binding HTH domain, Fis-type VCD_002699 IPR014319 Phage shock protein, PspA VCD_002699 IPR007157 PspA/IM30 VCD_002702 IPR006143 RND efflux pump, membrane fusion protein VCD_002702 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCD_002703 IPR006143 RND efflux pump, membrane fusion protein VCD_002703 IPR022824 Multidrug resistance protein MdtA VCD_002703 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VCD_002704 IPR001036 Acriflavin resistance protein VCD_002704 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCD_002705 IPR005019 Methyladenine glycosylase VCD_002705 IPR004597 DNA-3-methyladenine glycosylase I VCD_002705 IPR011257 DNA glycosylase VCD_002706 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_002706 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_002706 IPR006233 Cystathionine beta-lyase, bacterial VCD_002706 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VCD_002706 IPR015424 Pyridoxal phosphate-dependent transferase VCD_002707 IPR001736 Phospholipase D/Transphosphatidylase VCD_002707 IPR025202 Phospholipase D-like domain VCD_002707 IPR022924 Cardiolipin synthase VCD_002707 IPR027379 Cardiolipin synthase N-terminal VCD_002707 IPR030840 Cardiolipin synthase A VCD_002708 IPR037272 Sodium:neurotransmitter symporter superfamily VCD_002708 IPR000175 Sodium:neurotransmitter symporter VCD_002710 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_002710 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VCD_002710 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_002710 IPR006508 Pseudouridine synthase, RluA-like VCD_002711 IPR000462 CDP-alcohol phosphatidyltransferase VCD_002712 IPR017871 ABC transporter, conserved site VCD_002712 IPR003439 ABC transporter-like VCD_002712 IPR003593 AAA+ ATPase domain VCD_002712 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002713 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002713 IPR035906 MetI-like superfamily VCD_002714 IPR027020 Protein ynjB VCD_002714 IPR006059 Bacterial extracellular solute-binding protein VCD_002716 IPR010710 Protein of unknown function DUF1289 VCD_002718 IPR000412 ABC-2 transporter VCD_002719 IPR003593 AAA+ ATPase domain VCD_002719 IPR003439 ABC transporter-like VCD_002719 IPR017871 ABC transporter, conserved site VCD_002719 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002720 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG VCD_002720 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCD_002721 IPR018227 Amino acid/polyamine transporter 2 VCD_002721 IPR004694 Hydroxy amino acid transporter VCD_002723 IPR006667 SLC41 divalent cation transporters, integral membrane domain VCD_002723 IPR038076 MgtE, N-terminal domain superfamily VCD_002723 IPR038048 Magnesium transporter MgtE, transmembrane domain VCD_002723 IPR006669 Magnesium transporter MgtE VCD_002723 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VCD_002723 IPR000644 CBS domain VCD_002723 IPR006668 Magnesium transporter, MgtE intracellular domain VCD_002724 IPR011006 CheY-like superfamily VCD_002724 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002724 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002724 IPR029151 Periplasmic sensor-like domain superfamily VCD_002724 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002724 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_002724 IPR035965 PAS domain superfamily VCD_002724 IPR015387 LuxQ, periplasmic VCD_002724 IPR001789 Signal transduction response regulator, receiver domain VCD_002724 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002724 IPR005467 Histidine kinase domain VCD_002725 IPR029787 Nucleotide cyclase VCD_002725 IPR035919 EAL domain superfamily VCD_002725 IPR000160 GGDEF domain VCD_002725 IPR001633 EAL domain VCD_002725 IPR005330 MHYT domain VCD_002727 IPR007280 Peptidase, C-terminal, archaeal/bacterial VCD_002727 IPR013661 Peptidase M9, collagenase, N-terminal domain VCD_002727 IPR002169 Peptidase M9A/M9B, collagenase, bacterial VCD_002729 IPR036390 Winged helix DNA-binding domain superfamily VCD_002729 IPR000914 Solute-binding protein family 5 domain VCD_002729 IPR039424 Solute-binding protein family 5 VCD_002729 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VCD_002729 IPR023767 Transcriptional regulator SgrR VCD_002732 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002732 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_002732 IPR003660 HAMP domain VCD_002732 IPR004090 Chemotaxis methyl-accepting receptor VCD_002732 IPR000727 Target SNARE coiled-coil homology domain VCD_002734 IPR016132 Phytochrome chromophore attachment domain VCD_002734 IPR013515 Phytochrome, central region VCD_002734 IPR001294 Phytochrome VCD_002734 IPR029787 Nucleotide cyclase VCD_002734 IPR000160 GGDEF domain VCD_002734 IPR035919 EAL domain superfamily VCD_002734 IPR003018 GAF domain VCD_002734 IPR001633 EAL domain VCD_002734 IPR029016 GAF-like domain superfamily VCD_002735 IPR020055 Ribosomal protein L25, short-form VCD_002735 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily VCD_002735 IPR029751 Ribosomal protein L25 VCD_002735 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal VCD_002737 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002737 IPR039420 Transcriptional regulatory protein WalR-like VCD_002737 IPR001789 Signal transduction response regulator, receiver domain VCD_002737 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response VCD_002737 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_002737 IPR011006 CheY-like superfamily VCD_002739 IPR006935 Helicase/UvrB, N-terminal VCD_002739 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002739 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002739 IPR011332 Zinc-binding ribosomal protein VCD_002739 IPR001650 Helicase, C-terminal VCD_002740 IPR036986 RNA-binding S4 domain superfamily VCD_002740 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_002740 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VCD_002740 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_002740 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VCD_002740 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VCD_002740 IPR002942 RNA-binding S4 domain VCD_002741 IPR020846 Major facilitator superfamily domain VCD_002741 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VCD_002741 IPR011701 Major facilitator superfamily VCD_002741 IPR036259 MFS transporter superfamily VCD_002741 IPR004734 Multidrug resistance protein VCD_002743 IPR016040 NAD(P)-binding domain VCD_002743 IPR036291 NAD(P)-binding domain superfamily VCD_002743 IPR021295 Protein of unknown function DUF2867 VCD_002744 IPR002528 Multi antimicrobial extrusion protein VCD_002745 IPR003593 AAA+ ATPase domain VCD_002745 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002745 IPR017871 ABC transporter, conserved site VCD_002745 IPR003439 ABC transporter-like VCD_002748 IPR023171 Na/H antiporter domain superfamily VCD_002748 IPR004670 Na+/H+ antiporter NhaA VCD_002749 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_002749 IPR002129 Pyridoxal phosphate-dependent decarboxylase VCD_002749 IPR021115 Pyridoxal-phosphate binding site VCD_002749 IPR015424 Pyridoxal phosphate-dependent transferase VCD_002750 IPR005097 Saccharopine dehydrogenase, NADP binding domain VCD_002750 IPR032095 Saccharopine dehydrogenase, C-terminal VCD_002750 IPR036291 NAD(P)-binding domain superfamily VCD_002752 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VCD_002752 IPR005730 Carboxynorspermidine decarboxylase VCD_002752 IPR029066 PLP-binding barrel VCD_002753 IPR006664 Outer membrane protein, bacterial VCD_002753 IPR006665 OmpA-like domain VCD_002753 IPR006690 Outer membrane protein, OmpA-like, conserved site VCD_002753 IPR036737 OmpA-like domain superfamily VCD_002753 IPR008722 Outer membrane porin F, N-terminal VCD_002753 IPR028974 TSP type-3 repeat VCD_002753 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VCD_002754 IPR003423 Outer membrane efflux protein VCD_002754 IPR010130 Type I secretion outer membrane protein, TolC VCD_002759 IPR005119 LysR, substrate-binding VCD_002759 IPR000847 Transcription regulator HTH, LysR VCD_002759 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002759 IPR036390 Winged helix DNA-binding domain superfamily VCD_002761 IPR002725 Protein of unknown function DUF45 VCD_002762 IPR016909 Ribosomal RNA large subunit methyltransferase F VCD_002762 IPR010286 METTL16/RlmF family VCD_002762 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002764 IPR019734 Tetratricopeptide repeat VCD_002764 IPR013360 Pilus biogenesis/stability type IV, PilW VCD_002764 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_002764 IPR013026 Tetratricopeptide repeat-containing domain VCD_002765 IPR029062 Class I glutamine amidotransferase-like VCD_002765 IPR033752 MetA family VCD_002765 IPR005697 Homoserine O-succinyltransferase MetA VCD_002769 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCD_002771 IPR013767 PAS fold VCD_002771 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002771 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB VCD_002771 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002771 IPR039506 SpoOB, alpha-helical domain VCD_002771 IPR035965 PAS domain superfamily VCD_002771 IPR033463 Single cache domain 3 VCD_002771 IPR005467 Histidine kinase domain VCD_002771 IPR029151 Periplasmic sensor-like domain superfamily VCD_002771 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002771 IPR000014 PAS domain VCD_002772 IPR024187 Signal transduction response regulator, citrate/malate metabolism VCD_002772 IPR011006 CheY-like superfamily VCD_002772 IPR028141 Transcriptional regulator VCD_002772 IPR001789 Signal transduction response regulator, receiver domain VCD_002774 IPR011006 CheY-like superfamily VCD_002774 IPR002545 CheW-like domain VCD_002774 IPR036061 CheW-like domain superfamily VCD_002774 IPR001789 Signal transduction response regulator, receiver domain VCD_002774 IPR024181 Chemotaxis response regulator CheV VCD_002777 IPR029787 Nucleotide cyclase VCD_002777 IPR011006 CheY-like superfamily VCD_002777 IPR001789 Signal transduction response regulator, receiver domain VCD_002777 IPR000160 GGDEF domain VCD_002779 IPR011701 Major facilitator superfamily VCD_002779 IPR020846 Major facilitator superfamily domain VCD_002779 IPR036259 MFS transporter superfamily VCD_002779 IPR005829 Sugar transporter, conserved site VCD_002779 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG VCD_002779 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002779 IPR036390 Winged helix DNA-binding domain superfamily VCD_002780 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal VCD_002780 IPR001937 Galactose-1-phosphate uridyl transferase, class I VCD_002780 IPR036265 HIT-like superfamily VCD_002780 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal VCD_002780 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site VCD_002781 IPR019741 Galactokinase, conserved site VCD_002781 IPR036554 GHMP kinase, C-terminal domain superfamily VCD_002781 IPR006204 GHMP kinase N-terminal domain VCD_002781 IPR006203 GHMP kinase, ATP-binding, conserved site VCD_002781 IPR006206 Mevalonate/galactokinase VCD_002781 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_002781 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_002781 IPR022963 Galactokinase, bacterial VCD_002781 IPR000705 Galactokinase VCD_002781 IPR019539 Galactokinase galactose-binding domain VCD_002781 IPR013750 GHMP kinase, C-terminal domain VCD_002782 IPR014718 Glycoside hydrolase-type carbohydrate-binding VCD_002782 IPR011013 Galactose mutarotase-like domain superfamily VCD_002782 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VCD_002782 IPR015443 Aldose 1-epimerase VCD_002782 IPR013458 Aldose 1-epimerase, bacterial VCD_002782 IPR018052 Aldose 1-epimerase, conserved site VCD_002783 IPR000160 GGDEF domain VCD_002783 IPR029787 Nucleotide cyclase VCD_002784 IPR000160 GGDEF domain VCD_002784 IPR003660 HAMP domain VCD_002784 IPR029787 Nucleotide cyclase VCD_002784 IPR001633 EAL domain VCD_002784 IPR035919 EAL domain superfamily VCD_002784 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 VCD_002785 IPR002347 Short-chain dehydrogenase/reductase SDR VCD_002785 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_002785 IPR036291 NAD(P)-binding domain superfamily VCD_002786 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VCD_002786 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VCD_002786 IPR000399 TPP-binding enzyme, conserved site VCD_002786 IPR012000 Thiamine pyrophosphate enzyme, central domain VCD_002786 IPR029061 Thiamin diphosphate-binding fold VCD_002786 IPR029035 DHS-like NAD/FAD-binding domain superfamily VCD_002786 IPR012782 Acetolactate synthase, catabolic VCD_002789 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain VCD_002789 IPR005119 LysR, substrate-binding VCD_002789 IPR000847 Transcription regulator HTH, LysR VCD_002789 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002789 IPR036390 Winged helix DNA-binding domain superfamily VCD_002792 IPR020835 Catalase superfamily VCD_002792 IPR010582 Catalase immune-responsive domain VCD_002792 IPR002226 Catalase haem-binding site VCD_002792 IPR037060 Catalase core domain superfamily VCD_002792 IPR011614 Catalase core domain VCD_002792 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 VCD_002792 IPR018028 Catalase, mono-functional, haem-containing VCD_002792 IPR024708 Catalase active site VCD_002794 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily VCD_002794 IPR018152 Superoxide dismutase, copper/zinc, binding site VCD_002794 IPR001424 Superoxide dismutase, copper/zinc binding domain VCD_002794 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone VCD_002795 IPR018752 Uncharacterised protein family UPF0753 VCD_002796 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal VCD_002796 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit VCD_002797 IPR036390 Winged helix DNA-binding domain superfamily VCD_002797 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002797 IPR005119 LysR, substrate-binding VCD_002797 IPR000847 Transcription regulator HTH, LysR VCD_002798 IPR025110 AMP-binding enzyme, C-terminal domain VCD_002798 IPR020845 AMP-binding, conserved site VCD_002798 IPR000873 AMP-dependent synthetase/ligase VCD_002798 IPR010072 D-alanine--D-alanyl carrier protein ligase VCD_002798 IPR010071 Amino acid adenylation domain VCD_002798 IPR042099 AMP-dependent synthetase-like superfamily VCD_002804 IPR000362 Fumarate lyase family VCD_002804 IPR024083 Fumarase/histidase, N-terminal VCD_002804 IPR018951 Fumarase C, C-terminal VCD_002804 IPR022761 Fumarate lyase, N-terminal VCD_002804 IPR008948 L-Aspartase-like VCD_002804 IPR020557 Fumarate lyase, conserved site VCD_002804 IPR005677 Fumarate hydratase, class II VCD_002806 IPR002585 Cytochrome ubiquinol oxidase subunit 1 VCD_002807 IPR003317 Cytochrome ubiquinol oxidase subunit 2 VCD_002808 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002808 IPR025857 MacB-like periplasmic core domain VCD_002808 IPR017911 ABC transporter, macrolide export, ATP-binding domain VCD_002808 IPR003439 ABC transporter-like VCD_002808 IPR003838 ABC transporter permease protein domain VCD_002808 IPR017871 ABC transporter, conserved site VCD_002808 IPR003593 AAA+ ATPase domain VCD_002809 IPR003838 ABC transporter permease protein domain VCD_002809 IPR003439 ABC transporter-like VCD_002809 IPR017871 ABC transporter, conserved site VCD_002809 IPR003593 AAA+ ATPase domain VCD_002809 IPR017911 ABC transporter, macrolide export, ATP-binding domain VCD_002809 IPR025857 MacB-like periplasmic core domain VCD_002809 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002810 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002810 IPR003838 ABC transporter permease protein domain VCD_002810 IPR003439 ABC transporter-like VCD_002810 IPR017871 ABC transporter, conserved site VCD_002810 IPR017911 ABC transporter, macrolide export, ATP-binding domain VCD_002810 IPR025857 MacB-like periplasmic core domain VCD_002810 IPR003593 AAA+ ATPase domain VCD_002812 IPR010129 Type I secretion membrane fusion protein, HlyD family VCD_002812 IPR006144 Secretion protein HlyD, conserved site VCD_002814 IPR000847 Transcription regulator HTH, LysR VCD_002814 IPR036390 Winged helix DNA-binding domain superfamily VCD_002814 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002814 IPR005119 LysR, substrate-binding VCD_002815 IPR000763 Catalase-peroxidase haem VCD_002815 IPR002016 Haem peroxidase VCD_002815 IPR010255 Haem peroxidase superfamily VCD_002815 IPR019794 Peroxidase, active site VCD_002817 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VCD_002817 IPR018120 Glycoside hydrolase family 1, active site VCD_002817 IPR017853 Glycoside hydrolase superfamily VCD_002817 IPR001360 Glycoside hydrolase family 1 VCD_002818 IPR028082 Periplasmic binding protein-like I VCD_002818 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_002818 IPR000843 LacI-type HTH domain VCD_002819 IPR019897 RidA, conserved site VCD_002819 IPR035959 RutC-like superfamily VCD_002819 IPR006175 YjgF/YER057c/UK114 family VCD_002819 IPR035709 RutC family, YoaB-like VCD_002820 IPR037012 YhcH/YjgK/YiaL superfamily VCD_002820 IPR004375 YhcH/YjgK/YiaL family VCD_002821 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily VCD_002821 IPR030395 Glycerophosphodiester phosphodiesterase domain VCD_002822 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002822 IPR014036 DeoR C-terminal sensor domain VCD_002822 IPR037171 NagB/RpiA transferase-like VCD_002822 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VCD_002822 IPR036390 Winged helix DNA-binding domain superfamily VCD_002822 IPR001034 DeoR-type HTH domain VCD_002823 IPR003593 AAA+ ATPase domain VCD_002823 IPR003439 ABC transporter-like VCD_002823 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002823 IPR040582 MalK, OB fold domain VCD_002823 IPR008995 Molybdate/tungstate binding, C-terminal VCD_002823 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC VCD_002823 IPR017871 ABC transporter, conserved site VCD_002824 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE VCD_002824 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002824 IPR035906 MetI-like superfamily VCD_002825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002825 IPR035906 MetI-like superfamily VCD_002826 IPR006061 Solute-binding family 1, conserved site VCD_002826 IPR006059 Bacterial extracellular solute-binding protein VCD_002828 IPR002898 MotA/TolQ/ExbB proton channel VCD_002829 IPR002898 MotA/TolQ/ExbB proton channel VCD_002830 IPR003400 Biopolymer transport protein ExbD/TolR VCD_002831 IPR037682 TonB, C-terminal VCD_002831 IPR006260 TonB/TolA, C-terminal VCD_002831 IPR003538 Gram-negative bacterial TonB protein VCD_002833 IPR012340 Nucleic acid-binding, OB-fold VCD_002833 IPR029319 DNA ligase, OB-like domain VCD_002833 IPR012310 DNA ligase, ATP-dependent, central VCD_002833 IPR016059 DNA ligase, ATP-dependent, conserved site VCD_002835 IPR002528 Multi antimicrobial extrusion protein VCD_002839 IPR038765 Papain-like cysteine peptidase superfamily VCD_002839 IPR000064 Endopeptidase, NLPC/P60 domain VCD_002840 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002840 IPR029151 Periplasmic sensor-like domain superfamily VCD_002840 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding VCD_002840 IPR003660 HAMP domain VCD_002840 IPR033479 Double Cache domain 1 VCD_002844 IPR000600 ROK family VCD_002844 IPR023505 N-acetyl-D-glucosamine kinase VCD_002848 IPR001453 MoaB/Mog domain VCD_002848 IPR005110 MoeA, N-terminal and linker domain VCD_002848 IPR036425 MoaB/Mog-like domain superfamily VCD_002848 IPR008284 Molybdenum cofactor biosynthesis, conserved site VCD_002848 IPR038987 Molybdopterin biosynthesis protein MoeA-like VCD_002848 IPR005111 MoeA, C-terminal, domain IV VCD_002848 IPR036688 MoeA, C-terminal, domain IV superfamily VCD_002848 IPR036135 MoeA, N-terminal and linker domain superfamily VCD_002849 IPR029044 Nucleotide-diphospho-sugar transferases VCD_002849 IPR013482 Molybdenum cofactor guanylyltransferase VCD_002849 IPR025877 MobA-like NTP transferase VCD_002850 IPR013611 Transport-associated OB, type 2 VCD_002850 IPR003593 AAA+ ATPase domain VCD_002850 IPR003439 ABC transporter-like VCD_002850 IPR017871 ABC transporter, conserved site VCD_002850 IPR015853 ABC transporter, ferric cation import, FbpC VCD_002850 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002850 IPR008995 Molybdate/tungstate binding, C-terminal VCD_002851 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002851 IPR035906 MetI-like superfamily VCD_002852 IPR024370 PBP domain VCD_002853 IPR003593 AAA+ ATPase domain VCD_002853 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_002853 IPR025944 Sigma-54 interaction domain, conserved site VCD_002853 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_002853 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_002853 IPR001789 Signal transduction response regulator, receiver domain VCD_002853 IPR002197 DNA binding HTH domain, Fis-type VCD_002853 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002853 IPR009057 Homeobox-like domain superfamily VCD_002853 IPR011006 CheY-like superfamily VCD_002854 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002854 IPR000014 PAS domain VCD_002854 IPR035965 PAS domain superfamily VCD_002854 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002854 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_002854 IPR003660 HAMP domain VCD_002854 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002854 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002854 IPR005467 Histidine kinase domain VCD_002854 IPR013767 PAS fold VCD_002854 IPR000700 PAS-associated, C-terminal VCD_002855 IPR003593 AAA+ ATPase domain VCD_002855 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002855 IPR003439 ABC transporter-like VCD_002855 IPR032781 ABC-transporter extension domain VCD_002856 IPR003786 Sulfur carrier protein FdhD VCD_002856 IPR016193 Cytidine deaminase-like VCD_002860 IPR036411 TorD-like superfamily VCD_002860 IPR036386 HscB, C-terminal domain superfamily VCD_002860 IPR020945 DMSO/Nitrate reductase chaperone VCD_002860 IPR023069 Chaperone TorD VCD_002862 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VCD_002862 IPR006311 Twin-arginine translocation pathway, signal sequence VCD_002862 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VCD_002862 IPR009010 Aspartate decarboxylase-like domain superfamily VCD_002862 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VCD_002862 IPR006657 Molybdopterin dinucleotide-binding domain VCD_002862 IPR006443 Formate dehydrogenase-N, alpha subunit VCD_002862 IPR006656 Molybdopterin oxidoreductase VCD_002863 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_002863 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_002863 IPR000813 7Fe ferredoxin VCD_002866 IPR026590 Sirtuin family, catalytic core domain VCD_002866 IPR027546 Sirtuin, class III VCD_002866 IPR026591 Sirtuin, catalytic core small domain superfamily VCD_002866 IPR003000 Sirtuin family VCD_002866 IPR029035 DHS-like NAD/FAD-binding domain superfamily VCD_002867 IPR035570 UPF0234, N-terminal VCD_002867 IPR007551 Protein of unknown function DUF520 VCD_002867 IPR035571 UPF0234-like, C-terminal VCD_002867 IPR036183 YajQ-like superfamily VCD_002868 IPR013785 Aldolase-type TIM barrel VCD_002868 IPR006218 DAHP synthetase I/KDSA VCD_002868 IPR006219 DHAP synthase, class 1 VCD_002871 IPR014464 Conserved virulence factor B VCD_002871 IPR022967 RNA-binding domain, S1 VCD_002871 IPR012340 Nucleic acid-binding, OB-fold VCD_002871 IPR040764 Conserved virulence factor B-like, winged helix domain VCD_002871 IPR039566 Conserved virulence factor B, S1 domain VCD_002871 IPR003029 S1 domain VCD_002871 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002872 IPR011023 Nop2p VCD_002872 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VCD_002872 IPR023267 RNA (C5-cytosine) methyltransferase VCD_002872 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002872 IPR023545 rRNA small subunit methyltransferase F VCD_002872 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VCD_002872 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type VCD_002872 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal VCD_002873 IPR003399 Mce/MlaD VCD_002874 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VCD_002874 IPR011031 Multihaem cytochrome VCD_002874 IPR007498 Intermembrane transport protein PqiA-like VCD_002875 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002875 IPR039421 Type I protein exporter VCD_002875 IPR011527 ABC transporter type 1, transmembrane domain VCD_002875 IPR003439 ABC transporter-like VCD_002875 IPR003593 AAA+ ATPase domain VCD_002875 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_002876 IPR029016 GAF-like domain superfamily VCD_002876 IPR003018 GAF domain VCD_002876 IPR000614 Free Met sulfoxide reductase conserved site VCD_002877 IPR023529 RNA chaperone ProQ VCD_002877 IPR035236 RNA chaperone ProQ, C-terminal VCD_002877 IPR016103 ProQ/FinO domain VCD_002877 IPR036442 ProQ/FinO domain superfamily VCD_002878 IPR029045 ClpP/crotonase-like domain superfamily VCD_002878 IPR004447 C-terminal-processing peptidase S41A VCD_002878 IPR005151 Tail specific protease VCD_002878 IPR020992 Tail specific protease, C-terminal VCD_002878 IPR040573 Tail specific protease, N-terminal domain VCD_002878 IPR001478 PDZ domain VCD_002878 IPR036034 PDZ superfamily VCD_002880 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VCD_002880 IPR014782 Peptidase M1, membrane alanine aminopeptidase VCD_002880 IPR012779 Peptidase M1, alanyl aminopeptidase VCD_002880 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VCD_002880 IPR042097 Aminopeptidase N-like , N-terminal VCD_002880 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VCD_002880 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase VCD_002880 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VCD_002880 IPR027268 Peptidase M4/M1, CTD superfamily VCD_002882 IPR007780 NAD-glutamate dehydrogenase, bacteria VCD_002882 IPR036291 NAD(P)-binding domain superfamily VCD_002882 IPR028971 NAD-glutamate dehydrogenase VCD_002883 IPR001295 Dihydroorotate dehydrogenase, conserved site VCD_002883 IPR005719 Dihydroorotate dehydrogenase, class 2 VCD_002883 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 VCD_002883 IPR005720 Dihydroorotate dehydrogenase domain VCD_002883 IPR013785 Aldolase-type TIM barrel VCD_002884 IPR009809 Cell division protein ZapC VCD_002885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002885 IPR019614 S-adenosylmethionine-dependent methyltransferase VCD_002885 IPR000241 Putative RNA methylase domain VCD_002885 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_002885 IPR017244 Ribosomal RNA large subunit methyltransferase K/L VCD_002885 IPR004114 THUMP domain VCD_002889 IPR007040 Ribosome modulation factor VCD_002889 IPR023200 Ribosome modulation factor domain superfamily VCD_002890 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA VCD_002890 IPR029069 HotDog domain superfamily VCD_002890 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VCD_002891 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCD_002891 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_002891 IPR027065 Lon protease VCD_002891 IPR008269 Peptidase S16, Lon proteolytic domain VCD_002891 IPR041699 Lon protease, AAA domain VCD_002892 IPR035087 MatP, N-terminal VCD_002892 IPR035375 MatP, C-terminal ribbon-helix-helix domain VCD_002892 IPR013321 Arc-type ribbon-helix-helix VCD_002892 IPR009390 Macrodomain Ter protein, MatP VCD_002892 IPR038339 MatP, N-terminal domain superfamily VCD_002895 IPR011049 Serralysin-like metalloprotease, C-terminal VCD_002895 IPR022742 Serine aminopeptidase, S33 VCD_002895 IPR011509 RtxA toxin VCD_002895 IPR029058 Alpha/Beta hydrolase fold VCD_002895 IPR032074 Actin cross-linking domain VCD_002895 IPR020974 CGT/MARTX, cysteine protease (CPD) domain VCD_002895 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily VCD_002895 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain VCD_002896 IPR003996 RTX toxin-activating protein C, bacteria VCD_002898 IPR039421 Type I protein exporter VCD_002898 IPR003593 AAA+ ATPase domain VCD_002898 IPR011527 ABC transporter type 1, transmembrane domain VCD_002898 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_002898 IPR003439 ABC transporter-like VCD_002898 IPR017871 ABC transporter, conserved site VCD_002898 IPR010132 ATPase, type I secretion system, HlyB VCD_002898 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002898 IPR005074 Peptidase C39, bacteriocin processing VCD_002898 IPR039395 Peptidase C39-like A VCD_002899 IPR006144 Secretion protein HlyD, conserved site VCD_002899 IPR010129 Type I secretion membrane fusion protein, HlyD family VCD_002900 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002900 IPR010132 ATPase, type I secretion system, HlyB VCD_002900 IPR017871 ABC transporter, conserved site VCD_002900 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_002900 IPR011527 ABC transporter type 1, transmembrane domain VCD_002900 IPR003593 AAA+ ATPase domain VCD_002900 IPR005074 Peptidase C39, bacteriocin processing VCD_002900 IPR003439 ABC transporter-like VCD_002900 IPR039421 Type I protein exporter VCD_002900 IPR039395 Peptidase C39-like A VCD_002901 IPR005467 Histidine kinase domain VCD_002901 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002901 IPR015387 LuxQ, periplasmic VCD_002901 IPR035965 PAS domain superfamily VCD_002901 IPR029151 Periplasmic sensor-like domain superfamily VCD_002901 IPR011006 CheY-like superfamily VCD_002901 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002901 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002901 IPR001789 Signal transduction response regulator, receiver domain VCD_002901 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_002901 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002904 IPR036927 Cytochrome c oxidase-like, subunit I superfamily VCD_002904 IPR000883 Cytochrome c oxidase subunit I VCD_002904 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site VCD_002904 IPR004677 Cytochrome c oxidase cbb3-type, subunit I VCD_002904 IPR023616 Cytochrome c oxidase-like, subunit I domain VCD_002907 IPR036909 Cytochrome c-like domain superfamily VCD_002907 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VCD_002907 IPR008168 Cytochrome c, class IC VCD_002907 IPR009056 Cytochrome c-like domain VCD_002907 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VCD_002907 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VCD_002909 IPR023298 P-type ATPase, transmembrane domain superfamily VCD_002909 IPR006121 Heavy metal-associated domain, HMA VCD_002909 IPR008250 P-type ATPase, A domain superfamily VCD_002909 IPR023299 P-type ATPase, cytoplasmic domain N VCD_002909 IPR036412 HAD-like superfamily VCD_002909 IPR027256 P-type ATPase, subfamily IB VCD_002909 IPR036163 Heavy metal-associated domain superfamily VCD_002909 IPR023214 HAD superfamily VCD_002909 IPR001757 P-type ATPase VCD_002909 IPR017969 Heavy-metal-associated, conserved site VCD_002909 IPR018303 P-type ATPase, phosphorylation site VCD_002912 IPR012318 Crp-type HTH domain VCD_002912 IPR018490 Cyclic nucleotide-binding-like VCD_002912 IPR000595 Cyclic nucleotide-binding domain VCD_002912 IPR036390 Winged helix DNA-binding domain superfamily VCD_002912 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002912 IPR014710 RmlC-like jelly roll fold VCD_002912 IPR018335 Transcription regulator HTH, Crp-type, conserved site VCD_002913 IPR006016 UspA VCD_002914 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type VCD_002914 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase VCD_002914 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VCD_002914 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002918 IPR017871 ABC transporter, conserved site VCD_002918 IPR008995 Molybdate/tungstate binding, C-terminal VCD_002918 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA VCD_002918 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002918 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit VCD_002918 IPR013611 Transport-associated OB, type 2 VCD_002918 IPR003593 AAA+ ATPase domain VCD_002918 IPR003439 ABC transporter-like VCD_002919 IPR035906 MetI-like superfamily VCD_002919 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002920 IPR035906 MetI-like superfamily VCD_002920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002921 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VCD_002921 IPR006059 Bacterial extracellular solute-binding protein VCD_002922 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VCD_002922 IPR006059 Bacterial extracellular solute-binding protein VCD_002925 IPR001463 Sodium:alanine symporter VCD_002926 IPR001123 Amino acid exporter protein, LeuE-type VCD_002931 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VCD_002931 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VCD_002931 IPR006531 Gp5 N-terminal VCD_002931 IPR037026 Vgr protein, OB-fold domain superfamily VCD_002931 IPR032074 Actin cross-linking domain VCD_002932 IPR008514 Type VI secretion system effector, Hcp VCD_002932 IPR036624 Hcp1-like superfamily VCD_002933 IPR001333 Peptidase M32, carboxypeptidase Taq VCD_002934 IPR003660 HAMP domain VCD_002934 IPR033479 Double Cache domain 1 VCD_002934 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002934 IPR029151 Periplasmic sensor-like domain superfamily VCD_002935 IPR036259 MFS transporter superfamily VCD_002935 IPR020846 Major facilitator superfamily domain VCD_002935 IPR011701 Major facilitator superfamily VCD_002935 IPR004638 Drug resistance transporter EmrB-like VCD_002936 IPR005694 Efflux pump membrane protein VCD_002936 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCD_002937 IPR010131 RND efflux system, outer membrane lipoprotein, NodT VCD_002937 IPR003423 Outer membrane efflux protein VCD_002939 IPR011545 DEAD/DEAH box helicase domain VCD_002939 IPR028622 ATP-dependent RNA helicase RhlE VCD_002939 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002939 IPR001650 Helicase, C-terminal VCD_002939 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002939 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_002939 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_002940 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002940 IPR004090 Chemotaxis methyl-accepting receptor VCD_002940 IPR000700 PAS-associated, C-terminal VCD_002940 IPR035965 PAS domain superfamily VCD_002940 IPR013655 PAS fold-3 VCD_002940 IPR000014 PAS domain VCD_002940 IPR001610 PAC motif VCD_002941 IPR003660 HAMP domain VCD_002941 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VCD_002941 IPR000727 Target SNARE coiled-coil homology domain VCD_002941 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002941 IPR004090 Chemotaxis methyl-accepting receptor VCD_002942 IPR033463 Single cache domain 3 VCD_002942 IPR004090 Chemotaxis methyl-accepting receptor VCD_002942 IPR003660 HAMP domain VCD_002942 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002942 IPR029151 Periplasmic sensor-like domain superfamily VCD_002943 IPR036061 CheW-like domain superfamily VCD_002943 IPR002545 CheW-like domain VCD_002943 IPR039315 Chemotaxis protein CheW VCD_002944 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type VCD_002944 IPR011006 CheY-like superfamily VCD_002944 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VCD_002944 IPR001789 Signal transduction response regulator, receiver domain VCD_002944 IPR035909 Methylesterase CheB, C-terminal VCD_002946 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002946 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VCD_002946 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCD_002946 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VCD_002946 IPR026024 Chemotaxis protein methyltransferase CheR VCD_002946 IPR000780 MCP methyltransferase, CheR-type VCD_002947 IPR036061 CheW-like domain superfamily VCD_002947 IPR002545 CheW-like domain VCD_002947 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002947 IPR036641 HPT domain superfamily VCD_002947 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002947 IPR011006 CheY-like superfamily VCD_002947 IPR005467 Histidine kinase domain VCD_002947 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_002947 IPR001789 Signal transduction response regulator, receiver domain VCD_002947 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002948 IPR005467 Histidine kinase domain VCD_002948 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002948 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002948 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_002948 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002948 IPR002545 CheW-like domain VCD_002948 IPR036061 CheW-like domain superfamily VCD_002948 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding VCD_002948 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily VCD_002948 IPR035891 CheY-binding domain of CheA VCD_002948 IPR004105 Histidine kinase CheA-like, homodimeric domain VCD_002948 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily VCD_002948 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002948 IPR036641 HPT domain superfamily VCD_002951 IPR004090 Chemotaxis methyl-accepting receptor VCD_002951 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_002951 IPR003660 HAMP domain VCD_002952 IPR000390 Small multidrug resistance protein family VCD_002953 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VCD_002953 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VCD_002953 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily VCD_002953 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VCD_002953 IPR002081 Cryptochrome/DNA photolyase class 1 VCD_002953 IPR006050 DNA photolyase, N-terminal VCD_002953 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002954 IPR004638 Drug resistance transporter EmrB-like VCD_002954 IPR011701 Major facilitator superfamily VCD_002954 IPR005829 Sugar transporter, conserved site VCD_002954 IPR036259 MFS transporter superfamily VCD_002954 IPR020846 Major facilitator superfamily domain VCD_002955 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_002955 IPR036390 Winged helix DNA-binding domain superfamily VCD_002955 IPR000847 Transcription regulator HTH, LysR VCD_002955 IPR005119 LysR, substrate-binding VCD_002957 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain VCD_002957 IPR023741 Lipoate-protein ligase A VCD_002957 IPR019491 Lipoate protein ligase, C-terminal VCD_002957 IPR004562 Lipoyltransferase/lipoate-protein ligase VCD_002959 IPR018181 Heat shock protein 70, conserved site VCD_002959 IPR013126 Heat shock protein 70 family VCD_002959 IPR042054 YegD-like VCD_002961 IPR024590 RNA helicase HrpA, C-terminal VCD_002961 IPR011545 DEAD/DEAH box helicase domain VCD_002961 IPR011709 Domain of unknown function DUF1605 VCD_002961 IPR007502 Helicase-associated domain VCD_002961 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_002961 IPR001650 Helicase, C-terminal VCD_002961 IPR003593 AAA+ ATPase domain VCD_002961 IPR010222 RNA helicase HrpA VCD_002961 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002965 IPR001633 EAL domain VCD_002965 IPR000160 GGDEF domain VCD_002965 IPR005330 MHYT domain VCD_002965 IPR029787 Nucleotide cyclase VCD_002965 IPR035919 EAL domain superfamily VCD_002967 IPR018181 Heat shock protein 70, conserved site VCD_002967 IPR042039 HscA chaperone, nucleotide-binding domain VCD_002967 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VCD_002967 IPR013126 Heat shock protein 70 family VCD_002967 IPR010236 ISC system FeS cluster assembly, HscA chaperone VCD_002967 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VCD_002968 IPR010236 ISC system FeS cluster assembly, HscA chaperone VCD_002968 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VCD_002968 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VCD_002968 IPR013126 Heat shock protein 70 family VCD_002968 IPR018181 Heat shock protein 70, conserved site VCD_002968 IPR042039 HscA chaperone, nucleotide-binding domain VCD_002969 IPR000160 GGDEF domain VCD_002969 IPR029787 Nucleotide cyclase VCD_002969 IPR033424 Membrane-associated sensor domain VCD_002971 IPR029787 Nucleotide cyclase VCD_002971 IPR005330 MHYT domain VCD_002971 IPR000160 GGDEF domain VCD_002971 IPR035919 EAL domain superfamily VCD_002971 IPR001633 EAL domain VCD_002975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_002975 IPR018317 Queuosine biosynthesis protein QueC VCD_002976 IPR024924 7-carboxy-7-deazaguanine synthase-like VCD_002976 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria VCD_002976 IPR007197 Radical SAM VCD_002976 IPR013785 Aldolase-type TIM barrel VCD_002977 IPR023214 HAD superfamily VCD_002977 IPR006379 HAD-superfamily hydrolase, subfamily IIB VCD_002977 IPR036412 HAD-like superfamily VCD_002977 IPR000150 Cof family VCD_002978 IPR006366 Uroporphyrin-III C-methyltransferase VCD_002978 IPR012409 Sirohaem synthase VCD_002978 IPR036291 NAD(P)-binding domain superfamily VCD_002978 IPR014777 Tetrapyrrole methylase, subdomain 1 VCD_002978 IPR037115 Sirohaem synthase, dimerisation domain superfamily VCD_002978 IPR014776 Tetrapyrrole methylase, subdomain 2 VCD_002978 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VCD_002978 IPR019478 Sirohaem synthase, dimerisation domain VCD_002978 IPR006367 Sirohaem synthase, N-terminal VCD_002978 IPR000878 Tetrapyrrole methylase VCD_002978 IPR035996 Tetrapyrrole methylase superfamily VCD_002978 IPR028281 Siroheme synthase, central domain VCD_002979 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VCD_002979 IPR018313 Solute-binding protein family 3, conserved site VCD_002979 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_002980 IPR035906 MetI-like superfamily VCD_002980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002980 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_002981 IPR035906 MetI-like superfamily VCD_002981 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_002981 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VCD_002982 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_002982 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VCD_002982 IPR003593 AAA+ ATPase domain VCD_002982 IPR017871 ABC transporter, conserved site VCD_002982 IPR003439 ABC transporter-like VCD_002983 IPR006214 Bax inhibitor 1-related VCD_002984 IPR042072 DsrC-like protein, C-terminal domain VCD_002984 IPR007453 Sulphur transfer protein DsrC/TusE VCD_002984 IPR025526 DsrC-like domain superfamily VCD_002985 IPR001792 Acylphosphatase-like domain VCD_002985 IPR036046 Acylphosphatase-like domain superfamily VCD_002985 IPR020456 Acylphosphatase VCD_002985 IPR017968 Acylphosphatase, conserved site VCD_002986 IPR023542 rRNA large subunit methyltransferase I VCD_002986 IPR019614 S-adenosylmethionine-dependent methyltransferase VCD_002986 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_002986 IPR041532 RlmI, PUA-like domain VCD_002986 IPR036974 PUA domain superfamily VCD_002986 IPR002478 PUA domain VCD_002986 IPR015947 PUA-like superfamily VCD_002987 IPR000160 GGDEF domain VCD_002987 IPR029787 Nucleotide cyclase VCD_002989 IPR013766 Thioredoxin domain VCD_002989 IPR036249 Thioredoxin-like superfamily VCD_002989 IPR013740 Redoxin VCD_002989 IPR037944 Peroxiredoxin-5-like VCD_002989 IPR011767 Glutaredoxin active site VCD_002989 IPR002109 Glutaredoxin VCD_002990 IPR036641 HPT domain superfamily VCD_002990 IPR005467 Histidine kinase domain VCD_002990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_002990 IPR003594 Histidine kinase/HSP90-like ATPase VCD_002990 IPR003660 HAMP domain VCD_002990 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_002990 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_002990 IPR019247 Histidine kinase BarA, N-terminal VCD_002990 IPR011006 CheY-like superfamily VCD_002990 IPR001789 Signal transduction response regulator, receiver domain VCD_002990 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_002990 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_002991 IPR003607 HD/PDEase domain VCD_002991 IPR001789 Signal transduction response regulator, receiver domain VCD_002991 IPR037522 HD-GYP domain VCD_002991 IPR011006 CheY-like superfamily VCD_002992 IPR010987 Glutathione S-transferase, C-terminal-like VCD_002992 IPR040079 Glutathione Transferase family VCD_002992 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VCD_002992 IPR034333 Glutathione S-transferases, class Zeta , N-terminal VCD_002992 IPR005955 Glutathione S-transferases, class Zeta VCD_002992 IPR036249 Thioredoxin-like superfamily VCD_002992 IPR004046 Glutathione S-transferase, C-terminal VCD_002992 IPR004045 Glutathione S-transferase, N-terminal VCD_002992 IPR034330 Glutathione S-transferases, class Zeta , C-terminal VCD_002994 IPR005708 Homogentisate 1,2-dioxygenase VCD_002994 IPR014710 RmlC-like jelly roll fold VCD_002994 IPR011051 RmlC-like cupin domain superfamily VCD_002995 IPR005956 4-hydroxyphenylpyruvate dioxygenase VCD_002995 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal VCD_002995 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_002995 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal VCD_002995 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_002995 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_002996 IPR008007 Peptidase M42 VCD_002996 IPR036264 Bacterial exopeptidase dimerisation domain VCD_002996 IPR011650 Peptidase M20, dimerisation domain VCD_002996 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VCD_002996 IPR002933 Peptidase M20 VCD_002996 IPR010162 Peptidase M20B, peptidase T-like VCD_002999 IPR020845 AMP-binding, conserved site VCD_002999 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain VCD_002999 IPR042099 AMP-dependent synthetase-like superfamily VCD_002999 IPR000873 AMP-dependent synthetase/ligase VCD_002999 IPR025110 AMP-binding enzyme, C-terminal domain VCD_003000 IPR012709 2-methyl-aconitate isomerase PrpF VCD_003000 IPR007400 PrpF protein VCD_003001 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCD_003001 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent VCD_003001 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VCD_003001 IPR036008 Aconitase, iron-sulfur domain VCD_003001 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain VCD_003001 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VCD_003001 IPR006249 Aconitase/Iron-responsive element-binding protein 2 VCD_003002 IPR036969 Citrate synthase superfamily VCD_003002 IPR011278 2-methylcitrate synthase/citrate synthase type I VCD_003002 IPR016142 Citrate synthase-like, large alpha subdomain VCD_003002 IPR016143 Citrate synthase-like, small alpha subdomain VCD_003002 IPR019810 Citrate synthase active site VCD_003002 IPR002020 Citrate synthase VCD_003002 IPR024176 Citrate synthase, bacterial-type VCD_003003 IPR040442 Pyruvate kinase-like domain superfamily VCD_003003 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VCD_003003 IPR039556 ICL/PEPM domain VCD_003003 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_003003 IPR012695 2-methylisocitrate lyase VCD_003004 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003004 IPR008920 Transcription regulator FadR/GntR, C-terminal VCD_003004 IPR036390 Winged helix DNA-binding domain superfamily VCD_003004 IPR011711 GntR, C-terminal VCD_003004 IPR000524 Transcription regulator HTH, GntR VCD_003007 IPR002823 Protein of unknown function DUF112, transmembrane VCD_003010 IPR001851 ABC transporter, permease VCD_003010 IPR030158 Galactoside transport system permease protein MglC VCD_003011 IPR003593 AAA+ ATPase domain VCD_003011 IPR017871 ABC transporter, conserved site VCD_003011 IPR003439 ABC transporter-like VCD_003011 IPR015862 ABC transporter, galactose import, MglA VCD_003011 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003012 IPR028082 Periplasmic binding protein-like I VCD_003012 IPR025997 Periplasmic binding protein VCD_003016 IPR001789 Signal transduction response regulator, receiver domain VCD_003016 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_003016 IPR039420 Transcriptional regulatory protein WalR-like VCD_003016 IPR011006 CheY-like superfamily VCD_003016 IPR016032 Signal transduction response regulator, C-terminal effector VCD_003016 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003017 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003017 IPR005467 Histidine kinase domain VCD_003017 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_003017 IPR003660 HAMP domain VCD_003017 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_003017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003018 IPR010583 MltA-interacting MipA VCD_003019 IPR007488 Protein of unknown function DUF535 VCD_003020 IPR025944 Sigma-54 interaction domain, conserved site VCD_003020 IPR001789 Signal transduction response regulator, receiver domain VCD_003020 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_003020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003020 IPR011006 CheY-like superfamily VCD_003020 IPR002197 DNA binding HTH domain, Fis-type VCD_003020 IPR009057 Homeobox-like domain superfamily VCD_003021 IPR005467 Histidine kinase domain VCD_003021 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_003021 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003021 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003021 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_003021 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_003021 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003022 IPR031312 Sodium/sulphate symporter, conserved site VCD_003022 IPR001898 Solute carrier family 13 VCD_003023 IPR004090 Chemotaxis methyl-accepting receptor VCD_003023 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_003023 IPR003660 HAMP domain VCD_003024 IPR000821 Alanine racemase VCD_003024 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VCD_003024 IPR011079 Alanine racemase, C-terminal VCD_003024 IPR001608 Alanine racemase, N-terminal VCD_003024 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VCD_003024 IPR029066 PLP-binding barrel VCD_003025 IPR000620 EamA domain VCD_003027 IPR016181 Acyl-CoA N-acyltransferase VCD_003027 IPR000182 GNAT domain VCD_003028 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_003028 IPR035965 PAS domain superfamily VCD_003028 IPR000014 PAS domain VCD_003028 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003028 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_003028 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_003028 IPR025944 Sigma-54 interaction domain, conserved site VCD_003028 IPR002912 ACT domain VCD_003028 IPR030828 TyrR family, helix-turn-helix domain VCD_003028 IPR009057 Homeobox-like domain superfamily VCD_003028 IPR003593 AAA+ ATPase domain VCD_003029 IPR006507 Uncharacterised protein family UPF0283 VCD_003029 IPR021147 Protein of unknown function DUF697 VCD_003030 IPR007413 Protein of unknown function DUF463, YcjX-like protein VCD_003033 IPR005801 ADC synthase VCD_003033 IPR019999 Anthranilate synthase component I-like VCD_003033 IPR006805 Anthranilate synthase component I, N-terminal VCD_003033 IPR015890 Chorismate-utilising enzyme, C-terminal VCD_003033 IPR005802 Aminodeoxychorismate synthase, component I VCD_003034 IPR015797 NUDIX hydrolase-like domain superfamily VCD_003034 IPR023735 Uncharacterised nudix hydrolase NudL VCD_003034 IPR000086 NUDIX hydrolase domain VCD_003034 IPR000059 NUDIX hydrolase, NudL, conserved site VCD_003035 IPR018227 Amino acid/polyamine transporter 2 VCD_003035 IPR004694 Hydroxy amino acid transporter VCD_003036 IPR029009 Allosteric substrate binding domain superfamily VCD_003036 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VCD_003036 IPR005130 Serine dehydratase-like, alpha subunit VCD_003036 IPR005131 Serine dehydratase beta chain VCD_003037 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily VCD_003037 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family VCD_003044 IPR040980 SWI2/SNF2 ATPase VCD_003044 IPR021810 Protein of unknown function DUF3387 VCD_003044 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_003044 IPR004473 Restriction endonuclease, type I, HsdR VCD_003044 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003044 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VCD_003046 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003046 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VCD_003046 IPR003356 DNA methylase, adenine-specific VCD_003049 IPR017508 HipA, N-terminal subdomain 1 VCD_003049 IPR012893 HipA-like, C-terminal VCD_003053 IPR004090 Chemotaxis methyl-accepting receptor VCD_003053 IPR003660 HAMP domain VCD_003053 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_003054 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VCD_003054 IPR012340 Nucleic acid-binding, OB-fold VCD_003054 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_003054 IPR004522 Asparagine-tRNA ligase VCD_003054 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VCD_003054 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VCD_003055 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase VCD_003055 IPR029056 Ribokinase-like VCD_003055 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase VCD_003056 IPR006674 HD domain VCD_003056 IPR037522 HD-GYP domain VCD_003056 IPR003607 HD/PDEase domain VCD_003056 IPR003660 HAMP domain VCD_003058 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003058 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003058 IPR000796 Aspartate/other aminotransferase VCD_003058 IPR004839 Aminotransferase, class I/classII VCD_003058 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site VCD_003058 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003061 IPR033480 Single Cache domain 2 VCD_003061 IPR003660 HAMP domain VCD_003061 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_003061 IPR004090 Chemotaxis methyl-accepting receptor VCD_003062 IPR014756 Immunoglobulin E-set VCD_003062 IPR013783 Immunoglobulin-like fold VCD_003062 IPR011013 Galactose mutarotase-like domain superfamily VCD_003062 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal VCD_003062 IPR014438 Glucan biosynthesis protein MdoG/MdoD VCD_003062 IPR014718 Glycoside hydrolase-type carbohydrate-binding VCD_003062 IPR023704 Glucan biosynthesis protein G VCD_003063 IPR023725 Glucan biosynthesis glucosyltransferase H VCD_003063 IPR025993 Ceramide glucosyltransferase VCD_003063 IPR029044 Nucleotide-diphospho-sugar transferases VCD_003064 IPR028082 Periplasmic binding protein-like I VCD_003064 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_003064 IPR000843 LacI-type HTH domain VCD_003065 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VCD_003065 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria VCD_003065 IPR006879 Carbohydrate deacetylase YdjC-like VCD_003066 IPR036291 NAD(P)-binding domain superfamily VCD_003066 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VCD_003066 IPR022616 Glycosyl hydrolase, family 4, C-terminal VCD_003066 IPR001088 Glycoside hydrolase, family 4 VCD_003066 IPR019802 Glycoside hydrolase, family 4, conserved site VCD_003067 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit VCD_003067 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily VCD_003068 IPR003352 Phosphotransferase system, EIIC VCD_003068 IPR004501 Phosphotransferase system, EIIC component, type 3 VCD_003068 IPR004796 Phosphotransferase system, cellobiose-type IIC component VCD_003069 IPR013012 Phosphotransferase system, EIIB component, type 3 VCD_003069 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VCD_003069 IPR036095 PTS system IIB component-like superfamily VCD_003070 IPR002509 NodB homology domain VCD_003070 IPR003610 Carbohydrate-binding module family 5/12 VCD_003070 IPR036573 Carbohydrate-binding module superfamily 5/12 VCD_003070 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VCD_003071 IPR018093 BCCT transporter, conserved site VCD_003071 IPR000060 BCCT transporter family VCD_003072 IPR036390 Winged helix DNA-binding domain superfamily VCD_003072 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003072 IPR000835 MarR-type HTH domain VCD_003073 IPR011006 CheY-like superfamily VCD_003073 IPR001789 Signal transduction response regulator, receiver domain VCD_003073 IPR016032 Signal transduction response regulator, C-terminal effector VCD_003073 IPR000792 Transcription regulator LuxR, C-terminal VCD_003074 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003074 IPR033480 Single Cache domain 2 VCD_003074 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VCD_003074 IPR017171 Signal transduction histidine kinase, MctS VCD_003074 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003076 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VCD_003076 IPR004681 TRAP transporter large membrane protein DctM VCD_003078 IPR041722 Alpha-keto acid binding periplasmic protein VCD_003078 IPR018389 TRAP transporter solute receptor DctP/TeaA VCD_003078 IPR038404 TRAP transporter solute receptor DctP superfamily VCD_003078 IPR026289 Solute binding protein, TakP-like VCD_003081 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VCD_003081 IPR001279 Metallo-beta-lactamase VCD_003082 IPR006311 Twin-arginine translocation pathway, signal sequence VCD_003082 IPR010275 Protein of unknown function DUF882 VCD_003082 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily VCD_003083 IPR002477 Peptidoglycan binding-like VCD_003083 IPR038063 L,D-transpeptidase catalytic domain-like VCD_003083 IPR036365 PGBD-like superfamily VCD_003083 IPR005490 L,D-transpeptidase catalytic domain VCD_003088 IPR000926 GTP cyclohydrolase II, RibA VCD_003088 IPR032677 GTP cyclohydrolase II VCD_003088 IPR036144 RibA-like superfamily VCD_003090 IPR011701 Major facilitator superfamily VCD_003090 IPR020846 Major facilitator superfamily domain VCD_003090 IPR036259 MFS transporter superfamily VCD_003090 IPR004750 Sugar efflux VCD_003093 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VCD_003093 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat VCD_003093 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily VCD_003093 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VCD_003093 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VCD_003093 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VCD_003093 IPR005743 DNA gyrase, subunit A VCD_003094 IPR010233 Ubiquinone biosynthesis O-methyltransferase VCD_003094 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003095 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal VCD_003095 IPR000788 Ribonucleotide reductase large subunit, C-terminal VCD_003095 IPR039718 Ribonucleoside-diphosphate reductase large subunit VCD_003095 IPR005144 ATP-cone domain VCD_003095 IPR013509 Ribonucleotide reductase large subunit, N-terminal VCD_003095 IPR013346 Ribonucleotide reductase, class I , alpha subunit VCD_003096 IPR033909 Ribonucleotide reductase small subunit VCD_003096 IPR030475 Ribonucleotide reductase small subunit, acitve site VCD_003096 IPR009078 Ferritin-like superfamily VCD_003096 IPR000358 Ribonucleotide reductase small subunit family VCD_003096 IPR012348 Ribonucleotide reductase-like VCD_003097 IPR017938 Riboflavin synthase-like beta-barrel VCD_003097 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VCD_003097 IPR001433 Oxidoreductase FAD/NAD(P)-binding VCD_003097 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VCD_003097 IPR012675 Beta-grasp domain superfamily VCD_003097 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VCD_003097 IPR017927 FAD-binding domain, ferredoxin reductase-type VCD_003097 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VCD_003097 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VCD_003097 IPR036010 2Fe-2S ferredoxin-like superfamily VCD_003099 IPR036653 CinA-like, C-terminal VCD_003099 IPR008135 Competence-induced protein CinA VCD_003099 IPR001453 MoaB/Mog domain VCD_003099 IPR036425 MoaB/Mog-like domain superfamily VCD_003102 IPR004090 Chemotaxis methyl-accepting receptor VCD_003102 IPR003660 HAMP domain VCD_003102 IPR000727 Target SNARE coiled-coil homology domain VCD_003102 IPR033480 Single Cache domain 2 VCD_003102 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_003105 IPR003593 AAA+ ATPase domain VCD_003105 IPR003439 ABC transporter-like VCD_003105 IPR023693 ABC transporter, vitamin B12, BtuD VCD_003105 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003106 IPR000522 ABC transporter, permease protein, BtuC-like VCD_003106 IPR037294 ABC transporter, BtuC-like VCD_003106 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC VCD_003107 IPR016681 Succinylglutamate desuccinylase VCD_003107 IPR007036 Succinylglutamate desuccinylase/aspartoacylase VCD_003109 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase VCD_003109 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003110 IPR003805 Adenosylcobinamide-GDP ribazoletransferase VCD_003111 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal VCD_003111 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like VCD_003111 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic VCD_003111 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily VCD_003113 IPR011057 Mss4-like superfamily VCD_003113 IPR028427 Peptide methionine sulfoxide reductase VCD_003113 IPR002579 Peptide methionine sulphoxide reductase MrsB VCD_003115 IPR036397 Ribonuclease H superfamily VCD_003115 IPR034748 Exonuclease I, C-terminal alpha-helical domain VCD_003115 IPR023607 Exodeoxyribonuclease I VCD_003115 IPR013520 Exonuclease, RNase T/DNA polymerase III VCD_003115 IPR013620 Exodeoxyribonuclease I, C-terminal VCD_003115 IPR012337 Ribonuclease H-like superfamily VCD_003115 IPR038649 Exonuclease I, SH3-like domain superfamily VCD_003115 IPR034747 Exonuclease I, SH3-like domain VCD_003116 IPR005538 LrgA/CidA family VCD_003116 IPR022957 Uncharacterised protein family UPF0299 VCD_003117 IPR005261 Conserved hypothetical protein CHP00659 VCD_003117 IPR007300 CidB/LrgB family VCD_003118 IPR016192 APOBEC/CMP deaminase, zinc-binding VCD_003118 IPR020797 Cytidine deaminase, bacteria VCD_003118 IPR016193 Cytidine deaminase-like VCD_003118 IPR006263 Cytidine deaminase, homodimeric VCD_003118 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain VCD_003118 IPR002125 Cytidine and deoxycytidylate deaminase domain VCD_003120 IPR011054 Rudiment single hybrid motif VCD_003120 IPR013815 ATP-grasp fold, subdomain 1 VCD_003120 IPR016185 Pre-ATP-grasp domain superfamily VCD_003120 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase VCD_003120 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VCD_003120 IPR011761 ATP-grasp fold VCD_003121 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification VCD_003121 IPR025835 Thiopurine S-methyltransferase VCD_003121 IPR008854 TPMT family VCD_003121 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003123 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VCD_003123 IPR000119 Histone-like DNA-binding protein VCD_003123 IPR020816 Histone-like DNA-binding protein, conserved site VCD_003123 IPR005684 Integration host factor, alpha subunit VCD_003125 IPR005146 B3/B4 tRNA-binding domain VCD_003125 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit VCD_003125 IPR012340 Nucleic acid-binding, OB-fold VCD_003125 IPR002547 tRNA-binding domain VCD_003125 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain VCD_003125 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily VCD_003125 IPR005121 Ferrodoxin-fold anticodon-binding domain VCD_003125 IPR009061 Putative DNA-binding domain superfamily VCD_003125 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VCD_003125 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain VCD_003125 IPR005147 tRNA synthetase, B5-domain VCD_003126 IPR002319 Phenylalanyl-tRNA synthetase VCD_003126 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial VCD_003126 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal VCD_003126 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_003126 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit VCD_003126 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VCD_003128 IPR011006 CheY-like superfamily VCD_003128 IPR000160 GGDEF domain VCD_003128 IPR001789 Signal transduction response regulator, receiver domain VCD_003128 IPR029787 Nucleotide cyclase VCD_003129 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase VCD_003129 IPR000462 CDP-alcohol phosphatidyltransferase VCD_003129 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial VCD_003130 IPR004791 UvrABC system, subunit C VCD_003130 IPR001162 UvrC family homology region VCD_003130 IPR038476 UvrC homology region 2 superfamily VCD_003130 IPR010994 RuvA domain 2-like VCD_003130 IPR001943 UVR domain VCD_003130 IPR035901 GIY-YIG endonuclease superfamily VCD_003130 IPR000305 GIY-YIG endonuclease VCD_003130 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VCD_003130 IPR036876 UVR domain superfamily VCD_003131 IPR011006 CheY-like superfamily VCD_003131 IPR016032 Signal transduction response regulator, C-terminal effector VCD_003131 IPR001789 Signal transduction response regulator, receiver domain VCD_003131 IPR000792 Transcription regulator LuxR, C-terminal VCD_003132 IPR042087 DNA polymerase family B, C-terminal domain VCD_003132 IPR017964 DNA-directed DNA polymerase, family B, conserved site VCD_003132 IPR006172 DNA-directed DNA polymerase, family B VCD_003132 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain VCD_003132 IPR023211 DNA polymerase, palm domain superfamily VCD_003132 IPR012337 Ribonuclease H-like superfamily VCD_003132 IPR036397 Ribonuclease H superfamily VCD_003132 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain VCD_003133 IPR000014 PAS domain VCD_003133 IPR029787 Nucleotide cyclase VCD_003133 IPR000160 GGDEF domain VCD_003133 IPR035919 EAL domain superfamily VCD_003133 IPR035965 PAS domain superfamily VCD_003133 IPR001633 EAL domain VCD_003135 IPR020599 Translation elongation factor P/YeiP VCD_003135 IPR008991 Translation protein SH3-like domain superfamily VCD_003135 IPR015365 Elongation factor P, C-terminal VCD_003135 IPR012340 Nucleic acid-binding, OB-fold VCD_003135 IPR014722 Ribosomal protein L2, domain 2 VCD_003135 IPR013852 Translation elongation factor P/YeiP, conserved site VCD_003135 IPR013185 Translation elongation factor, KOW-like VCD_003135 IPR011897 Translation elongation factor P-like, YeiP VCD_003135 IPR001059 Translation elongation factor P/YeiP, central VCD_003136 IPR036763 Putative dsDNA mimic superfamily VCD_003136 IPR007376 dsDNA mimic, putative VCD_003138 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003138 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VCD_003138 IPR011663 UbiC transcription regulator-associated VCD_003138 IPR036390 Winged helix DNA-binding domain superfamily VCD_003138 IPR010248 Histidine utilization repressor VCD_003138 IPR000524 Transcription regulator HTH, GntR VCD_003139 IPR006680 Amidohydrolase-related VCD_003139 IPR032466 Metal-dependent hydrolase VCD_003139 IPR011059 Metal-dependent hydrolase, composite domain superfamily VCD_003139 IPR005920 Imidazolonepropionase VCD_003140 IPR020855 Ureohydrolase, manganese-binding site VCD_003140 IPR023696 Ureohydrolase domain superfamily VCD_003140 IPR005923 Formiminoglutamase VCD_003140 IPR006035 Ureohydrolase VCD_003141 IPR023636 Urocanase conserved site VCD_003141 IPR035085 Urocanase, Rossmann-like domain VCD_003141 IPR023637 Urocanase VCD_003141 IPR035401 Urocanase, C-terminal domain VCD_003141 IPR035400 Urocanase, N-terminal domain VCD_003141 IPR036190 Urocanase superfamily VCD_003141 IPR038364 Urocanase, central domain superfamily VCD_003142 IPR022313 Phenylalanine/histidine ammonia-lyases, active site VCD_003142 IPR001106 Aromatic amino acid lyase VCD_003142 IPR024083 Fumarase/histidase, N-terminal VCD_003142 IPR005921 Histidine ammonia-lyase VCD_003142 IPR008948 L-Aspartase-like VCD_003144 IPR033116 Serine proteases, trypsin family, serine active site VCD_003144 IPR001254 Serine proteases, trypsin domain VCD_003144 IPR009003 Peptidase S1, PA clan VCD_003144 IPR001314 Peptidase S1A, chymotrypsin family VCD_003144 IPR018114 Serine proteases, trypsin family, histidine active site VCD_003145 IPR007318 Phospholipid methyltransferase VCD_003146 IPR009051 Alpha-helical ferredoxin VCD_003146 IPR006094 FAD linked oxidase, N-terminal VCD_003146 IPR036318 FAD-binding, type PCMH-like superfamily VCD_003146 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_003146 IPR016166 FAD-binding domain, PCMH-type VCD_003146 IPR016164 FAD-linked oxidase-like, C-terminal VCD_003146 IPR004113 FAD-linked oxidase, C-terminal VCD_003146 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_003149 IPR036737 OmpA-like domain superfamily VCD_003149 IPR006690 Outer membrane protein, OmpA-like, conserved site VCD_003149 IPR006665 OmpA-like domain VCD_003149 IPR006664 Outer membrane protein, bacterial VCD_003149 IPR039567 Glycine zipper domain VCD_003153 IPR018236 SAICAR synthetase, conserved site VCD_003153 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type VCD_003153 IPR028923 SAICAR synthetase/ADE2, N-terminal VCD_003155 IPR001891 Malic oxidoreductase VCD_003155 IPR036291 NAD(P)-binding domain superfamily VCD_003155 IPR015884 Malic enzyme, conserved site VCD_003155 IPR012301 Malic enzyme, N-terminal domain VCD_003155 IPR023667 NAD-dependent malic enzyme, proteobacteria VCD_003155 IPR037062 Malic enzyme, N-terminal domain superfamily VCD_003155 IPR012302 Malic enzyme, NAD-binding VCD_003157 IPR023604 Uncharacterised protein family SanA VCD_003157 IPR003848 Domain of unknown function DUF218 VCD_003158 IPR029787 Nucleotide cyclase VCD_003158 IPR000160 GGDEF domain VCD_003158 IPR035965 PAS domain superfamily VCD_003158 IPR013656 PAS fold-4 VCD_003158 IPR000700 PAS-associated, C-terminal VCD_003158 IPR000014 PAS domain VCD_003159 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003159 IPR016454 Cysteine desulfurase VCD_003159 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA VCD_003159 IPR000192 Aminotransferase class V domain VCD_003159 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003159 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003159 IPR010970 Cysteine desulfurase, SufS VCD_003161 IPR005982 Thioredoxin reductase VCD_003161 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site VCD_003161 IPR023753 FAD/NAD(P)-binding domain VCD_003161 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_003162 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD VCD_003162 IPR003593 AAA+ ATPase domain VCD_003162 IPR011527 ABC transporter type 1, transmembrane domain VCD_003162 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_003162 IPR003439 ABC transporter-like VCD_003162 IPR017871 ABC transporter, conserved site VCD_003162 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003162 IPR039421 Type I protein exporter VCD_003163 IPR003593 AAA+ ATPase domain VCD_003163 IPR011527 ABC transporter type 1, transmembrane domain VCD_003163 IPR036640 ABC transporter type 1, transmembrane domain superfamily VCD_003163 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC VCD_003163 IPR003439 ABC transporter-like VCD_003163 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003163 IPR017871 ABC transporter, conserved site VCD_003164 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_003164 IPR036986 RNA-binding S4 domain superfamily VCD_003164 IPR002942 RNA-binding S4 domain VCD_003164 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VCD_003164 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_003164 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VCD_003164 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VCD_003165 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VCD_003165 IPR006070 YrdC-like domain VCD_003166 IPR016195 Polymerase/histidinol phosphatase-like VCD_003166 IPR004013 PHP domain VCD_003166 IPR003141 Polymerase/histidinol phosphatase, N-terminal VCD_003167 IPR012639 Tryptophan operon leader peptide VCD_003169 IPR006805 Anthranilate synthase component I, N-terminal VCD_003169 IPR005801 ADC synthase VCD_003169 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial VCD_003169 IPR015890 Chorismate-utilising enzyme, C-terminal VCD_003169 IPR019999 Anthranilate synthase component I-like VCD_003170 IPR017926 Glutamine amidotransferase VCD_003170 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VCD_003170 IPR029062 Class I glutamine amidotransferase-like VCD_003171 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily VCD_003171 IPR017459 Glycosyl transferase family 3, N-terminal domain VCD_003171 IPR000312 Glycosyl transferase, family 3 VCD_003171 IPR005940 Anthranilate phosphoribosyl transferase VCD_003171 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily VCD_003172 IPR011060 Ribulose-phosphate binding barrel VCD_003172 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) VCD_003172 IPR001468 Indole-3-glycerol phosphate synthase, conserved site VCD_003172 IPR013785 Aldolase-type TIM barrel VCD_003172 IPR013798 Indole-3-glycerol phosphate synthase VCD_003173 IPR001926 Pyridoxal-phosphate dependent enzyme VCD_003173 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCD_003173 IPR006654 Tryptophan synthase, beta chain VCD_003173 IPR006653 Tryptophan synthase, beta chain, conserved site VCD_003173 IPR023026 Tryptophan synthase beta chain/beta chain-like VCD_003174 IPR018204 Tryptophan synthase, alpha chain, active site VCD_003174 IPR002028 Tryptophan synthase, alpha chain VCD_003174 IPR013785 Aldolase-type TIM barrel VCD_003174 IPR011060 Ribulose-phosphate binding barrel VCD_003175 IPR023954 C4-dicarboxylate transport protein VCD_003175 IPR001991 Sodium:dicarboxylate symporter VCD_003175 IPR018107 Sodium:dicarboxylate symporter, conserved site VCD_003175 IPR036458 Sodium:dicarboxylate symporter superfamily VCD_003176 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003176 IPR020633 Thymidine kinase, conserved site VCD_003176 IPR001267 Thymidine kinase VCD_003177 IPR029351 GAD domain VCD_003177 IPR012340 Nucleic acid-binding, OB-fold VCD_003177 IPR004524 Aspartate-tRNA ligase, type 1 VCD_003177 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_003177 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VCD_003177 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VCD_003177 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VCD_003177 IPR004115 GAD-like domain superfamily VCD_003178 IPR036520 UPF0759 superfamily VCD_003178 IPR002763 Protein of unknown function DUF72 VCD_003179 IPR005271 Carboxy-S-adenosyl-L-methionine synthase VCD_003179 IPR041698 Methyltransferase domain 25 VCD_003179 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003180 IPR010017 tRNA U34 carboxymethyltransferase VCD_003180 IPR027555 tRNA (mo5U34)-methyltransferase-like VCD_003181 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VCD_003181 IPR021109 Aspartic peptidase domain superfamily VCD_003181 IPR013815 ATP-grasp fold, subdomain 1 VCD_003181 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VCD_003181 IPR013651 ATP-grasp fold, RimK-type VCD_003181 IPR011761 ATP-grasp fold VCD_003181 IPR041107 RimK, PreATP-grasp domain VCD_003184 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003184 IPR022278 Phosphoserine aminotransferase VCD_003184 IPR000192 Aminotransferase class V domain VCD_003184 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003184 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003186 IPR000014 PAS domain VCD_003186 IPR035965 PAS domain superfamily VCD_003186 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_003186 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_003186 IPR005467 Histidine kinase domain VCD_003186 IPR013767 PAS fold VCD_003186 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003186 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003186 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003189 IPR007077 TfoX, C-terminal VCD_003189 IPR026256 Transcriptional regulator, TfoX/Sxy-type VCD_003189 IPR007076 TfoX, N-terminal VCD_003191 IPR005642 Lysine exporter LysO VCD_003193 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VCD_003193 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003193 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003193 IPR002129 Pyridoxal phosphate-dependent decarboxylase VCD_003194 IPR009057 Homeobox-like domain superfamily VCD_003194 IPR000281 Helix-turn-helix protein RpiR VCD_003194 IPR035472 RpiR-like, SIS domain VCD_003194 IPR001347 Sugar isomerase (SIS) VCD_003194 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003195 IPR015590 Aldehyde dehydrogenase domain VCD_003195 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VCD_003195 IPR039697 Iron-type alcohol dehydrogenase-like VCD_003195 IPR016161 Aldehyde/histidinol dehydrogenase VCD_003195 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_003195 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_003195 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase VCD_003195 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VCD_003195 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain VCD_003196 IPR036249 Thioredoxin-like superfamily VCD_003196 IPR002109 Glutaredoxin VCD_003196 IPR014025 Glutaredoxin subgroup VCD_003196 IPR011902 Glutaredoxin, GrxA VCD_003197 IPR006512 YidE/YbjL duplication VCD_003197 IPR023017 Transport protein YbjL, putative VCD_003197 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VCD_003197 IPR006037 Regulator of K+ conductance, C-terminal VCD_003198 IPR028299 ClpA/B, conserved site 2 VCD_003198 IPR019489 Clp ATPase, C-terminal VCD_003198 IPR036628 Clp, N-terminal domain superfamily VCD_003198 IPR004176 Clp, N-terminal VCD_003198 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA VCD_003198 IPR003593 AAA+ ATPase domain VCD_003198 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003198 IPR001270 ClpA/B family VCD_003198 IPR018368 ClpA/B, conserved site 1 VCD_003198 IPR041546 ClpA/ClpB, AAA lid domain VCD_003198 IPR003959 ATPase, AAA-type, core VCD_003199 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VCD_003199 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VCD_003199 IPR003769 Adaptor protein ClpS, core VCD_003200 IPR002059 Cold-shock protein, DNA-binding VCD_003200 IPR019844 Cold-shock (CSD) domain VCD_003200 IPR011129 Cold shock domain VCD_003200 IPR012156 Cold shock, CspA VCD_003200 IPR012751 CspD, cold shock VCD_003200 IPR012340 Nucleic acid-binding, OB-fold VCD_003201 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric VCD_003202 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VCD_003202 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VCD_003202 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VCD_003202 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_003202 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_003203 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like VCD_003203 IPR023019 Histidine biosynthesis bifunctional protein HisIE VCD_003203 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase VCD_003203 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily VCD_003203 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain VCD_003204 IPR011060 Ribulose-phosphate binding barrel VCD_003204 IPR004651 Histidine biosynthesis, HisF VCD_003204 IPR006062 Histidine biosynthesis VCD_003204 IPR013785 Aldolase-type TIM barrel VCD_003205 IPR011060 Ribulose-phosphate binding barrel VCD_003205 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA VCD_003205 IPR013785 Aldolase-type TIM barrel VCD_003205 IPR006062 Histidine biosynthesis VCD_003205 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase VCD_003206 IPR010139 Imidazole glycerol phosphate synthase, subunit H VCD_003206 IPR029062 Class I glutamine amidotransferase-like VCD_003206 IPR017926 Glutamine amidotransferase VCD_003207 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VCD_003207 IPR023214 HAD superfamily VCD_003207 IPR020566 Histidine biosynthesis bifunctional protein HisB VCD_003207 IPR005954 Histidinol-phosphatase VCD_003207 IPR006543 Histidinol-phosphate phosphatase VCD_003207 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily VCD_003207 IPR000807 Imidazoleglycerol-phosphate dehydratase VCD_003207 IPR036412 HAD-like superfamily VCD_003207 IPR013954 Polynucleotide kinase 3 phosphatase VCD_003207 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_003207 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site VCD_003208 IPR004839 Aminotransferase, class I/classII VCD_003208 IPR005861 Histidinol-phosphate aminotransferase family VCD_003208 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003208 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003208 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VCD_003208 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003209 IPR001692 Histidinol dehydrogenase, conserved site VCD_003209 IPR016161 Aldehyde/histidinol dehydrogenase VCD_003209 IPR012131 Histidinol dehydrogenase VCD_003209 IPR022695 Histidinol dehydrogenase, monofunctional VCD_003210 IPR020621 ATP phosphoribosyltransferase HisG, long form VCD_003210 IPR013115 Histidine biosynthesis HisG, C-terminal VCD_003210 IPR011322 Nitrogen regulatory PII-like, alpha/beta VCD_003210 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VCD_003210 IPR013820 ATP phosphoribosyltransferase, catalytic domain VCD_003210 IPR001348 ATP phosphoribosyltransferase HisG VCD_003210 IPR018198 ATP phosphoribosyltransferase, conserved site VCD_003211 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VCD_003212 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily VCD_003212 IPR001801 Histone-like protein H-NS VCD_003212 IPR027454 Histone-like protein H-NS, N-terminal VCD_003212 IPR027444 Histone-like protein H-NS, C-terminal domain VCD_003213 IPR011611 Carbohydrate kinase PfkB VCD_003213 IPR029056 Ribokinase-like VCD_003213 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VCD_003214 IPR004506 tRNA-specific 2-thiouridylase VCD_003214 IPR023382 Adenine nucleotide alpha hydrolase-like domains VCD_003214 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003215 IPR035932 HflD-like superfamily VCD_003215 IPR007451 High frequency lysogenization protein HflD VCD_003216 IPR008948 L-Aspartase-like VCD_003216 IPR020557 Fumarate lyase, conserved site VCD_003216 IPR024083 Fumarase/histidase, N-terminal VCD_003216 IPR004769 Adenylosuccinate lyase VCD_003216 IPR022761 Fumarate lyase, N-terminal VCD_003216 IPR000362 Fumarate lyase family VCD_003216 IPR013539 Adenylosuccinate lyase PurB, C-terminal VCD_003218 IPR016087 Chalcone isomerase VCD_003220 IPR003333 Mycolic acid cyclopropane synthase VCD_003220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003223 IPR002347 Short-chain dehydrogenase/reductase SDR VCD_003223 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_003223 IPR036291 NAD(P)-binding domain superfamily VCD_003225 IPR001915 Peptidase M48 VCD_003225 IPR022919 Peptidase M48, protease HtpX, putative VCD_003227 IPR004472 Dethiobiotin synthase BioD VCD_003227 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003228 IPR013216 Methyltransferase type 11 VCD_003228 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC VCD_003228 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003229 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VCD_003229 IPR004839 Aminotransferase, class I/classII VCD_003229 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type VCD_003229 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria VCD_003229 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003229 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003229 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003230 IPR006638 Elp3/MiaB/NifB VCD_003230 IPR024177 Biotin synthase VCD_003230 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB VCD_003230 IPR010722 Biotin and thiamin synthesis-associated domain VCD_003230 IPR013785 Aldolase-type TIM barrel VCD_003230 IPR007197 Radical SAM VCD_003231 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003231 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003231 IPR005814 Aminotransferase class-III VCD_003231 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003231 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA VCD_003232 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_003232 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VCD_003232 IPR002317 Serine-tRNA ligase, type1 VCD_003232 IPR015866 Serine-tRNA synthetase, type1, N-terminal VCD_003232 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily VCD_003232 IPR033729 Serine-tRNA ligase catalytic core domain VCD_003232 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VCD_003233 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003233 IPR021886 MgsA AAA+ ATPase C-terminal VCD_003233 IPR003959 ATPase, AAA-type, core VCD_003233 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VCD_003233 IPR003593 AAA+ ATPase domain VCD_003233 IPR032423 AAA C-terminal domain VCD_003234 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria VCD_003234 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VCD_003234 IPR029046 Lipoprotein localisation LolA/LolB/LppX VCD_003235 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003235 IPR011115 SecA DEAD-like, N-terminal VCD_003235 IPR004027 SEC-C motif VCD_003235 IPR014018 SecA motor DEAD VCD_003235 IPR000185 Protein translocase subunit SecA VCD_003235 IPR020937 SecA conserved site VCD_003235 IPR036670 SecA, preprotein cross-linking domain superfamily VCD_003235 IPR036266 SecA, Wing/Scaffold superfamily VCD_003235 IPR011116 SecA Wing/Scaffold VCD_003235 IPR011130 SecA, preprotein cross-linking domain VCD_003236 IPR018517 tRNA-dihydrouridine synthase, conserved site VCD_003236 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal VCD_003236 IPR032886 tRNA-dihydrouridine(16) synthase VCD_003236 IPR035587 DUS-like, FMN-binding domain VCD_003236 IPR013785 Aldolase-type TIM barrel VCD_003236 IPR001269 tRNA-dihydrouridine synthase VCD_003237 IPR000160 GGDEF domain VCD_003237 IPR029787 Nucleotide cyclase VCD_003237 IPR029016 GAF-like domain superfamily VCD_003238 IPR017871 ABC transporter, conserved site VCD_003238 IPR003593 AAA+ ATPase domain VCD_003238 IPR015856 ABC transporter, CbiO/EcfA subunit VCD_003238 IPR003439 ABC transporter-like VCD_003238 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 VCD_003238 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003239 IPR001851 ABC transporter, permease VCD_003241 IPR018668 DNA-binding protein VF530-like VCD_003241 IPR036361 SAP domain superfamily VCD_003242 IPR007334 Uncharacterised protein family UPF0208 VCD_003243 IPR004372 Acetate/propionate kinase VCD_003243 IPR023865 Aliphatic acid kinase, short-chain, conserved site VCD_003243 IPR000890 Aliphatic acid kinase, short-chain VCD_003244 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VCD_003244 IPR002505 Phosphate acetyl/butaryl transferase VCD_003244 IPR042112 Phosphate acetyltransferase, domain 2 VCD_003244 IPR042113 Phosphate acetyltransferase, domain 1 VCD_003244 IPR004614 Phosphate acetyltransferase VCD_003244 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003244 IPR016475 Phosphate acetyltransferase, bacteria VCD_003244 IPR010766 DRTGG VCD_003245 IPR040079 Glutathione Transferase family VCD_003245 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VCD_003245 IPR010987 Glutathione S-transferase, C-terminal-like VCD_003245 IPR004045 Glutathione S-transferase, N-terminal VCD_003245 IPR036249 Thioredoxin-like superfamily VCD_003245 IPR016639 Glutathione S-transferase Omega/GSH VCD_003246 IPR003439 ABC transporter-like VCD_003246 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_003246 IPR017871 ABC transporter, conserved site VCD_003246 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003246 IPR003593 AAA+ ATPase domain VCD_003247 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003247 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_003247 IPR017871 ABC transporter, conserved site VCD_003247 IPR003439 ABC transporter-like VCD_003247 IPR003593 AAA+ ATPase domain VCD_003248 IPR035906 MetI-like superfamily VCD_003248 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_003248 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCD_003249 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_003249 IPR035906 MetI-like superfamily VCD_003250 IPR023765 Solute-binding protein family 5, conserved site VCD_003250 IPR030678 Peptide/nickel binding protein, MppA-type VCD_003250 IPR039424 Solute-binding protein family 5 VCD_003250 IPR000914 Solute-binding protein family 5 domain VCD_003252 IPR001789 Signal transduction response regulator, receiver domain VCD_003252 IPR013656 PAS fold-4 VCD_003252 IPR035965 PAS domain superfamily VCD_003252 IPR000014 PAS domain VCD_003252 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_003252 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_003252 IPR005467 Histidine kinase domain VCD_003252 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003252 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003252 IPR011006 CheY-like superfamily VCD_003252 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003253 IPR025944 Sigma-54 interaction domain, conserved site VCD_003253 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_003253 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_003253 IPR002197 DNA binding HTH domain, Fis-type VCD_003253 IPR009057 Homeobox-like domain superfamily VCD_003253 IPR011006 CheY-like superfamily VCD_003253 IPR003593 AAA+ ATPase domain VCD_003253 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_003253 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003253 IPR001789 Signal transduction response regulator, receiver domain VCD_003254 IPR000014 PAS domain VCD_003254 IPR029787 Nucleotide cyclase VCD_003254 IPR005330 MHYT domain VCD_003254 IPR000160 GGDEF domain VCD_003254 IPR035919 EAL domain superfamily VCD_003254 IPR001633 EAL domain VCD_003254 IPR035965 PAS domain superfamily VCD_003255 IPR029151 Periplasmic sensor-like domain superfamily VCD_003255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_003255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_003255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003255 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003255 IPR005467 Histidine kinase domain VCD_003256 IPR005467 Histidine kinase domain VCD_003256 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_003256 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003256 IPR013767 PAS fold VCD_003256 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_003256 IPR000014 PAS domain VCD_003256 IPR035965 PAS domain superfamily VCD_003256 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003256 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003258 IPR011006 CheY-like superfamily VCD_003258 IPR001789 Signal transduction response regulator, receiver domain VCD_003261 IPR005145 Putative GTP-binding controlling metal-binding domain VCD_003261 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily VCD_003261 IPR006070 YrdC-like domain VCD_003261 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 VCD_003261 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VCD_003266 IPR005247 YbhB/YbcL VCD_003266 IPR036610 PEBP-like superfamily VCD_003266 IPR008914 Phosphatidylethanolamine-binding protein VCD_003268 IPR001223 Glycoside hydrolase family 18, catalytic domain VCD_003268 IPR029070 Chitinase insertion domain superfamily VCD_003268 IPR011583 Chitinase II VCD_003268 IPR009470 Chitinase, C-terminal VCD_003268 IPR036573 Carbohydrate-binding module superfamily 5/12 VCD_003268 IPR003610 Carbohydrate-binding module family 5/12 VCD_003268 IPR017853 Glycoside hydrolase superfamily VCD_003268 IPR013783 Immunoglobulin-like fold VCD_003271 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VCD_003271 IPR036291 NAD(P)-binding domain superfamily VCD_003271 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VCD_003271 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VCD_003271 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VCD_003271 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VCD_003272 IPR036390 Winged helix DNA-binding domain superfamily VCD_003272 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003272 IPR001845 HTH ArsR-type DNA-binding domain VCD_003272 IPR011991 ArsR-like helix-turn-helix domain VCD_003274 IPR013656 PAS fold-4 VCD_003274 IPR035965 PAS domain superfamily VCD_003274 IPR000700 PAS-associated, C-terminal VCD_003274 IPR000014 PAS domain VCD_003274 IPR000160 GGDEF domain VCD_003274 IPR029787 Nucleotide cyclase VCD_003277 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VCD_003277 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain VCD_003277 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003279 IPR003703 Acyl-CoA thioesterase VCD_003279 IPR029069 HotDog domain superfamily VCD_003280 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VCD_003280 IPR036390 Winged helix DNA-binding domain superfamily VCD_003280 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003280 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCD_003280 IPR011008 Dimeric alpha-beta barrel VCD_003280 IPR000485 AsnC-type HTH domain VCD_003280 IPR011991 ArsR-like helix-turn-helix domain VCD_003280 IPR019888 Transcription regulator AsnC-type VCD_003281 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCD_003281 IPR001926 Pyridoxal-phosphate dependent enzyme VCD_003281 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA VCD_003281 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VCD_003282 IPR029045 ClpP/crotonase-like domain superfamily VCD_003282 IPR002142 Peptidase S49 VCD_003282 IPR013703 Peptidase S49, N-terminal proteobacteria VCD_003283 IPR002347 Short-chain dehydrogenase/reductase SDR VCD_003283 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_003283 IPR036291 NAD(P)-binding domain superfamily VCD_003284 IPR008228 Uncharacterised conserved protein UCP006173 VCD_003284 IPR005358 Putative zinc- or iron-chelating domain containing protein VCD_003285 IPR005358 Putative zinc- or iron-chelating domain containing protein VCD_003286 IPR006171 TOPRIM domain VCD_003286 IPR023627 Recombination protein RecR VCD_003286 IPR000093 DNA recombination protein RecR VCD_003286 IPR034137 RecR, TOPRIM domain VCD_003286 IPR023628 Recombination protein RecR, C4-type zinc finger VCD_003287 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VCD_003287 IPR004401 Nucleoid-associated protein YbaB/EbfC family VCD_003288 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily VCD_003288 IPR003593 AAA+ ATPase domain VCD_003288 IPR022754 DNA polymerase III, gamma subunit, domain III VCD_003288 IPR012763 DNA polymerase III, subunit gamma/ tau VCD_003288 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003288 IPR021029 DNA polymerase III, tau subunit, domain V VCD_003288 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV VCD_003288 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VCD_003288 IPR001270 ClpA/B family VCD_003289 IPR000836 Phosphoribosyltransferase domain VCD_003289 IPR029057 Phosphoribosyltransferase-like VCD_003289 IPR005764 Adenine phosphoribosyl transferase VCD_003290 IPR007401 Protein of unknown function DUF454 VCD_003292 IPR001789 Signal transduction response regulator, receiver domain VCD_003292 IPR039420 Transcriptional regulatory protein WalR-like VCD_003292 IPR036457 PPM-type phosphatase domain superfamily VCD_003292 IPR011006 CheY-like superfamily VCD_003292 IPR028616 Regulator of RpoS VCD_003293 IPR036390 Winged helix DNA-binding domain superfamily VCD_003293 IPR005119 LysR, substrate-binding VCD_003293 IPR000847 Transcription regulator HTH, LysR VCD_003293 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003294 IPR029479 Nitroreductase VCD_003294 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VCD_003294 IPR000415 Nitroreductase-like VCD_003295 IPR001753 Enoyl-CoA hydratase/isomerase VCD_003295 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VCD_003295 IPR012802 Fatty oxidation complex, alpha subunit FadJ VCD_003295 IPR029045 ClpP/crotonase-like domain superfamily VCD_003295 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VCD_003295 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VCD_003295 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VCD_003295 IPR036291 NAD(P)-binding domain superfamily VCD_003295 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_003296 IPR012806 Acetyl-CoA C-acyltransferase FadI VCD_003296 IPR002155 Thiolase VCD_003296 IPR016039 Thiolase-like VCD_003296 IPR020617 Thiolase, C-terminal VCD_003296 IPR020616 Thiolase, N-terminal VCD_003296 IPR020613 Thiolase, conserved site VCD_003297 IPR013325 RNA polymerase sigma factor, region 2 VCD_003297 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VCD_003297 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site VCD_003297 IPR014284 RNA polymerase sigma-70 like domain VCD_003297 IPR039425 RNA polymerase sigma-70 like VCD_003297 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003297 IPR013324 RNA polymerase sigma factor, region 3/4-like VCD_003297 IPR007627 RNA polymerase sigma-70 region 2 VCD_003299 IPR042117 OMPP1/FadL/TodX superfamily VCD_003299 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCD_003300 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCD_003300 IPR042117 OMPP1/FadL/TodX superfamily VCD_003301 IPR023485 Phosphotyrosine protein phosphatase I VCD_003301 IPR036196 Phosphotyrosine protein phosphatase I superfamily VCD_003301 IPR017867 Protein-tyrosine phosphatase, low molecular weight VCD_003302 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR VCD_003302 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain VCD_003302 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003303 IPR007844 AsmA VCD_003304 IPR026008 Uridine kinase VCD_003304 IPR006083 Phosphoribulokinase/uridine kinase VCD_003304 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003304 IPR000764 Uridine kinase-like VCD_003305 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003305 IPR000808 Mrp, conserved site VCD_003305 IPR019591 Mrp/NBP35 ATP-binding protein VCD_003305 IPR034904 Fe-S cluster assembly domain superfamily VCD_003305 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VCD_003306 IPR033911 Methioninyl-tRNA synthetase core domain VCD_003306 IPR029038 Methionyl-tRNA synthetase, Zn-domain VCD_003306 IPR012340 Nucleic acid-binding, OB-fold VCD_003306 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003306 IPR002547 tRNA-binding domain VCD_003306 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VCD_003306 IPR023458 Methionine-tRNA ligase, type 1 VCD_003306 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal VCD_003306 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain VCD_003306 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_003306 IPR015413 Methionyl/Leucyl tRNA synthetase VCD_003306 IPR014758 Methionyl-tRNA synthetase VCD_003308 IPR018016 Nucleoside phosphorylase, conserved site VCD_003308 IPR000845 Nucleoside phosphorylase domain VCD_003308 IPR035994 Nucleoside phosphorylase superfamily VCD_003308 IPR010058 Uridine phosphorylase VCD_003309 IPR023299 P-type ATPase, cytoplasmic domain N VCD_003309 IPR001757 P-type ATPase VCD_003309 IPR027256 P-type ATPase, subfamily IB VCD_003309 IPR036163 Heavy metal-associated domain superfamily VCD_003309 IPR006121 Heavy metal-associated domain, HMA VCD_003309 IPR017969 Heavy-metal-associated, conserved site VCD_003309 IPR023214 HAD superfamily VCD_003309 IPR018303 P-type ATPase, phosphorylation site VCD_003309 IPR008250 P-type ATPase, A domain superfamily VCD_003309 IPR023298 P-type ATPase, transmembrane domain superfamily VCD_003309 IPR036412 HAD-like superfamily VCD_003310 IPR029069 HotDog domain superfamily VCD_003310 IPR006683 Thioesterase domain VCD_003310 IPR000644 CBS domain VCD_003310 IPR010766 DRTGG VCD_003310 IPR000524 Transcription regulator HTH, GntR VCD_003310 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003310 IPR036390 Winged helix DNA-binding domain superfamily VCD_003310 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VCD_003311 IPR000160 GGDEF domain VCD_003311 IPR029787 Nucleotide cyclase VCD_003311 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VCD_003312 IPR003448 Molybdopterin biosynthesis MoaE VCD_003312 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily VCD_003313 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VCD_003313 IPR012675 Beta-grasp domain superfamily VCD_003313 IPR003749 Sulfur carrier ThiS/MoaD-like VCD_003314 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily VCD_003314 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain VCD_003314 IPR023045 Molybdenum cofactor biosynthesis C VCD_003315 IPR012245 Molybdenum cofactor biosynthesis protein MoaB VCD_003315 IPR036425 MoaB/Mog-like domain superfamily VCD_003315 IPR001453 MoaB/Mog domain VCD_003315 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria VCD_003315 IPR008284 Molybdenum cofactor biosynthesis, conserved site VCD_003316 IPR010505 Molybdenum cofactor synthesis C-terminal VCD_003316 IPR013785 Aldolase-type TIM barrel VCD_003316 IPR007197 Radical SAM VCD_003316 IPR013483 Molybdenum cofactor biosynthesis protein A VCD_003316 IPR006638 Elp3/MiaB/NifB VCD_003317 IPR010119 Gluconeogenesis factor VCD_003317 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VCD_003317 IPR038136 Gluconeogenesis factor superfamily VCD_003318 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VCD_003318 IPR036641 HPT domain superfamily VCD_003319 IPR003593 AAA+ ATPase domain VCD_003319 IPR011006 CheY-like superfamily VCD_003319 IPR009057 Homeobox-like domain superfamily VCD_003319 IPR002197 DNA binding HTH domain, Fis-type VCD_003319 IPR025944 Sigma-54 interaction domain, conserved site VCD_003319 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003319 IPR001789 Signal transduction response regulator, receiver domain VCD_003319 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_003319 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_003320 IPR001650 Helicase, C-terminal VCD_003320 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003320 IPR024759 UvrB, YAD/RRR-motif-containing domain VCD_003320 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_003320 IPR006935 Helicase/UvrB, N-terminal VCD_003320 IPR041471 UvrB, interaction domain VCD_003320 IPR004807 UvrABC system, subunit B VCD_003320 IPR001943 UVR domain VCD_003320 IPR036876 UVR domain superfamily VCD_003321 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA VCD_003321 IPR003667 NqrDE/RnfAE VCD_003322 IPR007202 4Fe-4S domain VCD_003322 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_003322 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB VCD_003322 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria VCD_003322 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_003323 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily VCD_003323 IPR026902 RnfC Barrel sandwich hybrid domain VCD_003323 IPR009051 Alpha-helical ferredoxin VCD_003323 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_003323 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain VCD_003323 IPR019554 Soluble ligand binding domain VCD_003323 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_003323 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC VCD_003324 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D VCD_003324 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD VCD_003325 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG VCD_003325 IPR007329 FMN-binding VCD_003326 IPR003667 NqrDE/RnfAE VCD_003326 IPR010968 Ion-translocating oxidoreductase complex subunit E VCD_003327 IPR004035 Endonuclease III, iron-sulphur binding site VCD_003327 IPR003265 HhH-GPD domain VCD_003327 IPR000445 Helix-hairpin-helix motif VCD_003327 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VCD_003327 IPR005759 Endonuclease III VCD_003327 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VCD_003327 IPR004036 Endonuclease III-like, conserved site-2 VCD_003327 IPR011257 DNA glycosylase VCD_003328 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCD_003328 IPR037523 Vicinal oxygen chelate (VOC) domain VCD_003328 IPR018146 Glyoxalase I, conserved site VCD_003328 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCD_003328 IPR004361 Glyoxalase I VCD_003329 IPR020206 Uncharacterised protein family, VP2110 VCD_003330 IPR006690 Outer membrane protein, OmpA-like, conserved site VCD_003330 IPR006665 OmpA-like domain VCD_003330 IPR036737 OmpA-like domain superfamily VCD_003330 IPR041544 MotY N-terminal domain VCD_003332 IPR012337 Ribonuclease H-like superfamily VCD_003332 IPR036397 Ribonuclease H superfamily VCD_003332 IPR005987 Ribonuclease T VCD_003332 IPR013520 Exonuclease, RNase T/DNA polymerase III VCD_003333 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VCD_003333 IPR032813 Putative Na+/H+ antiporter, N-terminal VCD_003334 IPR017932 Glutamine amidotransferase type 2 domain VCD_003334 IPR035584 Amidophosphoribosyltransferase, N-terminal VCD_003334 IPR005854 Amidophosphoribosyltransferase VCD_003334 IPR029057 Phosphoribosyltransferase-like VCD_003334 IPR000836 Phosphoribosyltransferase domain VCD_003334 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_003335 IPR003825 Colicin V production, CvpA VCD_003336 IPR032898 Cell division protein DedD VCD_003336 IPR007730 Sporulation-like domain VCD_003336 IPR036680 Sporulation-like domain superfamily VCD_003337 IPR013221 Mur ligase, central VCD_003337 IPR036615 Mur ligase, C-terminal domain superfamily VCD_003337 IPR036565 Mur-like, catalytic domain superfamily VCD_003337 IPR018109 Folylpolyglutamate synthetase, conserved site VCD_003337 IPR001645 Folylpolyglutamate synthetase VCD_003337 IPR004101 Mur ligase, C-terminal VCD_003338 IPR041010 Acetyl-coA carboxylase zinc finger domain VCD_003338 IPR034733 Acetyl-CoA carboxylase VCD_003338 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit VCD_003338 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal VCD_003338 IPR029045 ClpP/crotonase-like domain superfamily VCD_003339 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain VCD_003339 IPR020095 Pseudouridine synthase I, TruA, C-terminal VCD_003339 IPR001406 Pseudouridine synthase I, TruA VCD_003339 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_003341 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VCD_003341 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003341 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal VCD_003341 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily VCD_003341 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain VCD_003341 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VCD_003341 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily VCD_003341 IPR004514 Glutamine-tRNA synthetase VCD_003341 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_003341 IPR022861 Glutamine-tRNA ligase, bacterial VCD_003343 IPR036878 Glucose permease domain IIB VCD_003343 IPR013013 Phosphotransferase system, EIIC component, type 1 VCD_003343 IPR011055 Duplicated hybrid motif VCD_003343 IPR001996 Phosphotransferase system, IIB component, type 1 VCD_003343 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component VCD_003343 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VCD_003343 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 VCD_003343 IPR003352 Phosphotransferase system, EIIC VCD_003344 IPR006680 Amidohydrolase-related VCD_003344 IPR032466 Metal-dependent hydrolase VCD_003344 IPR011059 Metal-dependent hydrolase, composite domain superfamily VCD_003344 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VCD_003345 IPR036390 Winged helix DNA-binding domain superfamily VCD_003345 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003345 IPR000600 ROK family VCD_003345 IPR000835 MarR-type HTH domain VCD_003346 IPR006153 Cation/H+ exchanger VCD_003346 IPR003148 Regulator of K+ conductance, N-terminal VCD_003346 IPR036291 NAD(P)-binding domain superfamily VCD_003346 IPR004771 K+/H+ exchanger VCD_003346 IPR038770 Sodium/solute symporter superfamily VCD_003347 IPR017932 Glutamine amidotransferase type 2 domain VCD_003347 IPR029055 Nucleophile aminohydrolases, N-terminal VCD_003347 IPR001962 Asparagine synthase VCD_003347 IPR006426 Asparagine synthase, glutamine-hydrolyzing VCD_003347 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003347 IPR033738 Asparagine synthase, N-terminal domain VCD_003348 IPR006645 NusG, N-terminal VCD_003348 IPR036735 NusG, N-terminal domain superfamily VCD_003348 IPR010215 Transcription antitermination protein RfaH VCD_003349 IPR000109 Proton-dependent oligopeptide transporter family VCD_003349 IPR005279 Dipeptide/tripeptide permease VCD_003349 IPR020846 Major facilitator superfamily domain VCD_003349 IPR036259 MFS transporter superfamily VCD_003349 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VCD_003349 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A VCD_003351 IPR019772 Ferrochelatase, active site VCD_003351 IPR033659 Ferrochelatase, N-terminal VCD_003351 IPR033644 Ferrochelatase, C-terminal VCD_003351 IPR001015 Ferrochelatase VCD_003352 IPR006259 Adenylate kinase subfamily VCD_003352 IPR000850 Adenylate kinase/UMP-CMP kinase VCD_003352 IPR033690 Adenylate kinase, conserved site VCD_003352 IPR007862 Adenylate kinase, active site lid domain VCD_003352 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003353 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_003353 IPR020575 Heat shock protein Hsp90, N-terminal VCD_003353 IPR001404 Heat shock protein Hsp90 family VCD_003353 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003353 IPR037196 HSP90, C-terminal domain VCD_003353 IPR019805 Heat shock protein Hsp90, conserved site VCD_003353 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003354 IPR039420 Transcriptional regulatory protein WalR-like VCD_003354 IPR016032 Signal transduction response regulator, C-terminal effector VCD_003354 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003354 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_003355 IPR035288 Trans-membrane regulatory protein ToxS VCD_003357 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type VCD_003357 IPR029052 Metallo-dependent phosphatase-like VCD_003357 IPR041802 YfcE-like, metallophosphatase domain VCD_003357 IPR000979 Phosphodiesterase MJ0936/Vps29 VCD_003357 IPR020935 Phosphodiesterase YfcE, conserved site VCD_003358 IPR010099 Epimerase family protein SDR39U1 VCD_003358 IPR036291 NAD(P)-binding domain superfamily VCD_003358 IPR001509 NAD-dependent epimerase/dehydratase VCD_003358 IPR013549 Domain of unknown function DUF1731 VCD_003359 IPR036291 NAD(P)-binding domain superfamily VCD_003359 IPR002347 Short-chain dehydrogenase/reductase SDR VCD_003359 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_003361 IPR036249 Thioredoxin-like superfamily VCD_003361 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_003361 IPR013766 Thioredoxin domain VCD_003362 IPR018080 Band 7/stomatin-like, conserved site VCD_003362 IPR032435 Band 7, C-terminal extension VCD_003362 IPR001107 Band 7 domain VCD_003362 IPR036013 Band 7/SPFH domain superfamily VCD_003362 IPR001972 Stomatin family VCD_003363 IPR002810 NfeD-like, C-terminal domain VCD_003364 IPR009061 Putative DNA-binding domain superfamily VCD_003364 IPR011789 Cu(I)-responsive transcriptional regulator VCD_003364 IPR000551 MerR-type HTH domain VCD_003366 IPR001702 Porin, Gram-negative type VCD_003366 IPR033900 Porin domain, Gram-negative type VCD_003366 IPR002299 Porin, Neisseria sp. type VCD_003366 IPR023614 Porin domain superfamily VCD_003367 IPR013840 NAD-dependent DNA ligase, N-terminal VCD_003367 IPR001357 BRCT domain VCD_003367 IPR012340 Nucleic acid-binding, OB-fold VCD_003367 IPR013839 NAD-dependent DNA ligase, adenylation VCD_003367 IPR001679 NAD-dependent DNA ligase VCD_003367 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VCD_003367 IPR033136 NAD-dependent DNA ligase, conserved site VCD_003367 IPR010994 RuvA domain 2-like VCD_003367 IPR018239 NAD-dependent DNA ligase, active site VCD_003367 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type VCD_003367 IPR036420 BRCT domain superfamily VCD_003367 IPR004150 NAD-dependent DNA ligase, OB-fold VCD_003367 IPR041663 DisA/LigA, helix-hairpin-helix motif VCD_003368 IPR007449 ZipA, C-terminal FtsZ-binding domain VCD_003368 IPR011919 Cell division protein ZipA VCD_003368 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily VCD_003369 IPR022985 Sulfate transporter CysZ VCD_003370 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCD_003370 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VCD_003370 IPR005856 Cysteine synthase VCD_003370 IPR001926 Pyridoxal-phosphate dependent enzyme VCD_003370 IPR005859 Cysteine synthase CysK VCD_003371 IPR035895 HPr-like superfamily VCD_003371 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VCD_003371 IPR000032 Phosphocarrier protein HPr-like VCD_003371 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VCD_003372 IPR023151 PEP-utilising enzyme, conserved site VCD_003372 IPR018274 PEP-utilising enzyme, active site VCD_003372 IPR024692 Phosphotransferase system, enzyme I VCD_003372 IPR008279 PEP-utilising enzyme, mobile domain VCD_003372 IPR006318 Phosphotransferase system, enzyme I-like VCD_003372 IPR008731 Phosphotransferase system, enzyme I N-terminal VCD_003372 IPR036618 PtsI, HPr-binding domain superfamily VCD_003372 IPR036637 Phosphohistidine domain superfamily VCD_003372 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_003372 IPR040442 Pyruvate kinase-like domain superfamily VCD_003372 IPR000121 PEP-utilising enzyme, C-terminal VCD_003373 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 VCD_003373 IPR011055 Duplicated hybrid motif VCD_003374 IPR002938 FAD-binding domain VCD_003374 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VCD_003374 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VCD_003374 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_003375 IPR038135 Methylthiotransferase, N-terminal domain superfamily VCD_003375 IPR013848 Methylthiotransferase, N-terminal VCD_003375 IPR007197 Radical SAM VCD_003375 IPR023404 Radical SAM, alpha/beta horseshoe VCD_003375 IPR002792 TRAM domain VCD_003375 IPR005839 Methylthiotransferase VCD_003375 IPR006638 Elp3/MiaB/NifB VCD_003375 IPR020612 Methylthiotransferase, conserved site VCD_003375 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB VCD_003376 IPR003714 PhoH-like protein VCD_003376 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003377 IPR020549 Endoribonuclease YbeY, conserved site VCD_003377 IPR002036 Endoribonuclease YbeY VCD_003377 IPR023091 Metalloprotease catalytic domain superfamily, predicted VCD_003378 IPR036318 FAD-binding, type PCMH-like superfamily VCD_003378 IPR016169 FAD-binding, type PCMH, subdomain 2 VCD_003378 IPR005170 Transporter-associated domain VCD_003378 IPR000644 CBS domain VCD_003379 IPR003010 Carbon-nitrogen hydrolase VCD_003379 IPR004563 Apolipoprotein N-acyltransferase VCD_003379 IPR036526 Carbon-nitrogen hydrolase superfamily VCD_003380 IPR009912 Zinc-ribbon containing domain VCD_003381 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VCD_003381 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_003381 IPR002302 Leucine-tRNA ligase VCD_003381 IPR025709 Leucyl-tRNA synthetase, editing domain VCD_003381 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VCD_003381 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003381 IPR002300 Aminoacyl-tRNA synthetase, class Ia VCD_003381 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VCD_003382 IPR007485 LPS-assembly lipoprotein LptE VCD_003383 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003383 IPR032780 DNA polymerase III subunit delta, C-terminal VCD_003383 IPR010372 DNA polymerase III delta, N-terminal VCD_003383 IPR005790 DNA polymerase III, delta subunit VCD_003383 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VCD_003384 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VCD_003385 IPR029028 Alpha/beta knot methyltransferases VCD_003385 IPR003742 RNA methyltransferase RlmH VCD_003385 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCD_003386 IPR005311 Penicillin-binding protein, dimerisation domain VCD_003386 IPR001460 Penicillin-binding protein, transpeptidase VCD_003386 IPR017790 Penicillin-binding protein 2 VCD_003386 IPR036138 Penicillin-binding protein, dimerisation domain superfamily VCD_003386 IPR012338 Beta-lactamase/transpeptidase-like VCD_003387 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VCD_003387 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB VCD_003387 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA VCD_003388 IPR036908 RlpA-like domain superfamily VCD_003388 IPR034718 Endolytic peptidoglycan transglycosylase RlpA VCD_003388 IPR009009 RlpA-like protein, double-psi beta-barrel domain VCD_003388 IPR036680 Sporulation-like domain superfamily VCD_003388 IPR012997 Rare lipoprotein A VCD_003388 IPR007730 Sporulation-like domain VCD_003389 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VCD_003389 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily VCD_003389 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VCD_003389 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VCD_003389 IPR015956 Penicillin-binding protein, C-terminal domain superfamily VCD_003389 IPR012338 Beta-lactamase/transpeptidase-like VCD_003390 IPR007454 Uncharacterised protein family UPF0250 VCD_003390 IPR027471 YbeD-like domain superfamily VCD_003391 IPR020605 Octanoyltransferase, conserved site VCD_003391 IPR000544 Octanoyltransferase VCD_003391 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain VCD_003392 IPR003698 Lipoyl synthase VCD_003392 IPR031691 Lipoyl synthase, N-terminal VCD_003392 IPR006638 Elp3/MiaB/NifB VCD_003392 IPR013785 Aldolase-type TIM barrel VCD_003392 IPR007197 Radical SAM VCD_003394 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VCD_003394 IPR001085 Serine hydroxymethyltransferase VCD_003394 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003394 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003394 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003394 IPR039429 Serine hydroxymethyltransferase-like domain VCD_003398 IPR025669 AAA domain VCD_003398 IPR005702 Exopolysaccharide synthesis protein VCD_003398 IPR032807 Tyrosine kinase, G-rich domain VCD_003398 IPR003856 Polysaccharide chain length determinant N-terminal domain VCD_003398 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003399 IPR003715 Polysaccharide export protein VCD_003399 IPR019554 Soluble ligand binding domain VCD_003399 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain VCD_003401 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ VCD_003401 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VCD_003401 IPR003362 Bacterial sugar transferase VCD_003404 IPR022218 ToxR activated gene A lipoprotein domain VCD_003404 IPR040966 Metalloprotease StcE, C-terminal VCD_003404 IPR019503 Peptidase M66 domain VCD_003407 IPR028082 Periplasmic binding protein-like I VCD_003407 IPR004629 Glycosyl transferase WecB/TagA/CpsF VCD_003407 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase VCD_003409 IPR001296 Glycosyl transferase, family 1 VCD_003409 IPR000368 Sucrose synthase VCD_003409 IPR012820 Sucrose synthase, plant/cyanobacteria VCD_003411 IPR042122 Serine acetyltransferase, N-terminal domain superfamily VCD_003411 IPR018357 Hexapeptide transferase, conserved site VCD_003411 IPR001451 Hexapeptide repeat VCD_003411 IPR005881 Serine O-acetyltransferase VCD_003411 IPR011004 Trimeric LpxA-like superfamily VCD_003415 IPR018357 Hexapeptide transferase, conserved site VCD_003415 IPR011004 Trimeric LpxA-like superfamily VCD_003415 IPR001451 Hexapeptide repeat VCD_003415 IPR024688 Maltose/galactoside acetyltransferase VCD_003416 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase VCD_003416 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily VCD_003416 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VCD_003416 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VCD_003416 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_003416 IPR036291 NAD(P)-binding domain superfamily VCD_003416 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VCD_003416 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VCD_003417 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like VCD_003417 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VCD_003417 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB VCD_003418 IPR023485 Phosphotyrosine protein phosphatase I VCD_003418 IPR036196 Phosphotyrosine protein phosphatase I superfamily VCD_003418 IPR017867 Protein-tyrosine phosphatase, low molecular weight VCD_003419 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCD_003419 IPR001036 Acriflavin resistance protein VCD_003420 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VCD_003420 IPR022824 Multidrug resistance protein MdtA VCD_003420 IPR006143 RND efflux pump, membrane fusion protein VCD_003421 IPR012769 Trehalose-6-phosphate hydrolase VCD_003421 IPR032091 Maltogenic Amylase, C-terminal VCD_003421 IPR017853 Glycoside hydrolase superfamily VCD_003421 IPR013780 Glycosyl hydrolase, all-beta VCD_003421 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VCD_003422 IPR003352 Phosphotransferase system, EIIC VCD_003422 IPR013013 Phosphotransferase system, EIIC component, type 1 VCD_003422 IPR001996 Phosphotransferase system, IIB component, type 1 VCD_003422 IPR011296 Phosphotransferase system, trehalose-specific IIBC component VCD_003422 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VCD_003422 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VCD_003422 IPR036878 Glucose permease domain IIB VCD_003423 IPR012771 Trehalose operon repressor VCD_003423 IPR028082 Periplasmic binding protein-like I VCD_003423 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_003423 IPR000843 LacI-type HTH domain VCD_003424 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase VCD_003424 IPR023214 HAD superfamily VCD_003424 IPR006543 Histidinol-phosphate phosphatase VCD_003424 IPR036412 HAD-like superfamily VCD_003424 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VCD_003425 IPR017871 ABC transporter, conserved site VCD_003425 IPR018449 NIL domain VCD_003425 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria VCD_003425 IPR026253 Methionine import ATP-binding protein MetN VCD_003425 IPR003593 AAA+ ATPase domain VCD_003425 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain VCD_003425 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003425 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal VCD_003425 IPR003439 ABC transporter-like VCD_003426 IPR035906 MetI-like superfamily VCD_003426 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_003427 IPR004872 Lipoprotein NlpA family VCD_003428 IPR016908 Uncharacterised conserved protein UCP029037 VCD_003429 IPR009948 Syd VCD_003429 IPR038228 Syd superfamily VCD_003430 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF VCD_003430 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal VCD_003430 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 VCD_003432 IPR029787 Nucleotide cyclase VCD_003432 IPR012292 Globin/Protoglobin VCD_003432 IPR009050 Globin-like superfamily VCD_003432 IPR000160 GGDEF domain VCD_003432 IPR039435 Diguanylate cyclase DosC, globin sensor domain VCD_003433 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal VCD_003433 IPR031100 LOG family VCD_003433 IPR021826 Domain of unknown function DUF3412 VCD_003433 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily VCD_003434 IPR022895 Flap endonuclease Xni VCD_003434 IPR029060 PIN-like domain superfamily VCD_003434 IPR008918 Helix-hairpin-helix motif, class 2 VCD_003434 IPR038969 Flap endonuclease VCD_003434 IPR020045 DNA polymerase I-like, H3TH domain VCD_003434 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VCD_003434 IPR002421 5'-3' exonuclease, N-terminal VCD_003434 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VCD_003435 IPR006696 Protein of unknown function DUF423 VCD_003436 IPR005119 LysR, substrate-binding VCD_003436 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003436 IPR036390 Winged helix DNA-binding domain superfamily VCD_003436 IPR000847 Transcription regulator HTH, LysR VCD_003437 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003437 IPR036873 Rhodanese-like domain superfamily VCD_003437 IPR026340 Thiazole biosynthesis domain VCD_003437 IPR020536 Thil, AANH domain VCD_003437 IPR004114 THUMP domain VCD_003437 IPR003720 tRNA sulfurtransferase ThiI VCD_003437 IPR001763 Rhodanese-like domain VCD_003439 IPR006665 OmpA-like domain VCD_003439 IPR036737 OmpA-like domain superfamily VCD_003439 IPR025713 Motility protein B, N-terminal domain VCD_003440 IPR000540 Flagellar motor protein MotA, conserved site VCD_003440 IPR002898 MotA/TolQ/ExbB proton channel VCD_003441 IPR037004 Exonuclease VII, small subunit superfamily VCD_003441 IPR003761 Exonuclease VII, small subunit VCD_003442 IPR000092 Polyprenyl synthetase VCD_003442 IPR008949 Isoprenoid synthase domain superfamily VCD_003442 IPR033749 Polyprenyl synthetase, conserved site VCD_003443 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VCD_003443 IPR005474 Transketolase, N-terminal VCD_003443 IPR033248 Transketolase, C-terminal domain VCD_003443 IPR020826 Transketolase binding site VCD_003443 IPR005475 Transketolase-like, pyrimidine-binding domain VCD_003443 IPR029061 Thiamin diphosphate-binding fold VCD_003443 IPR005477 Deoxyxylulose-5-phosphate synthase VCD_003444 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_003444 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VCD_003444 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_003445 IPR036814 YqcC-like superfamily VCD_003445 IPR023376 YqcC-like domain VCD_003445 IPR007384 Protein of unknown function UCP006257 VCD_003448 IPR016181 Acyl-CoA N-acyltransferase VCD_003448 IPR000182 GNAT domain VCD_003450 IPR003791 Protein of unknown function UPF0178 VCD_003451 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT VCD_003451 IPR011540 AbgT, Proteobacteria VCD_003452 IPR000473 Ribosomal protein L36 VCD_003452 IPR035977 Ribosomal protein L36 superfamily VCD_003453 IPR027493 Ribosomal protein L31 type B VCD_003453 IPR042105 Ribosomal protein L31 superfamily VCD_003453 IPR034704 L28p-like VCD_003453 IPR002150 Ribosomal protein L31 VCD_003454 IPR023368 Uncharacterised protein family UPF0066, conserved site VCD_003454 IPR040372 YaeB-like VCD_003454 IPR036413 YaeB-like superfamily VCD_003454 IPR036414 YaeB, N-terminal domain superfamily VCD_003454 IPR023370 TrmO-like, N-terminal domain VCD_003454 IPR041369 TrmO, C-terminal VCD_003455 IPR002316 Proline-tRNA ligase, class IIa VCD_003455 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily VCD_003455 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VCD_003455 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_003455 IPR004154 Anticodon-binding VCD_003455 IPR036621 Anticodon-binding domain superfamily VCD_003455 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VCD_003455 IPR033730 Prokaryote proline-tRNA ligase core domain VCD_003455 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 VCD_003455 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type VCD_003457 IPR009624 Uncharacterised protein family UPF0253 VCD_003459 IPR002686 Transposase IS200-like VCD_003459 IPR036515 Transposase IS200-like superfamily VCD_003460 IPR010073 Phosphoribosylformylglycinamidine synthase PurL VCD_003460 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain VCD_003460 IPR010918 PurM-like, C-terminal domain VCD_003460 IPR036676 PurM-like, C-terminal domain superfamily VCD_003460 IPR036921 PurM-like, N-terminal domain superfamily VCD_003460 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily VCD_003460 IPR017926 Glutamine amidotransferase VCD_003460 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal VCD_003460 IPR029062 Class I glutamine amidotransferase-like VCD_003462 IPR023346 Lysozyme-like domain superfamily VCD_003462 IPR008258 Transglycosylase SLT domain 1 VCD_003462 IPR000189 Prokaryotic transglycosylase, active site VCD_003462 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCD_003462 IPR023703 Membrane-bound lytic murein transglycosylase F VCD_003463 IPR016192 APOBEC/CMP deaminase, zinc-binding VCD_003463 IPR002125 Cytidine and deoxycytidylate deaminase domain VCD_003463 IPR028883 tRNA-specific adenosine deaminase VCD_003463 IPR016193 Cytidine deaminase-like VCD_003464 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT VCD_003464 IPR011540 AbgT, Proteobacteria VCD_003470 IPR012902 Prokaryotic N-terminal methylation site VCD_003470 IPR001082 Fimbrial protein pilin VCD_003471 IPR036869 Chaperone J-domain superfamily VCD_003471 IPR002939 Chaperone DnaJ, C-terminal VCD_003471 IPR001623 DnaJ domain VCD_003471 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VCD_003471 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VCD_003471 IPR012724 Chaperone DnaJ VCD_003471 IPR018253 DnaJ domain, conserved site VCD_003471 IPR008971 HSP40/DnaJ peptide-binding VCD_003472 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VCD_003472 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VCD_003472 IPR012725 Chaperone DnaK VCD_003472 IPR018181 Heat shock protein 70, conserved site VCD_003472 IPR013126 Heat shock protein 70 family VCD_003474 IPR000740 GrpE nucleotide exchange factor VCD_003474 IPR013805 GrpE nucleotide exchange factor, coiled-coil VCD_003474 IPR009012 GrpE nucleotide exchange factor, head VCD_003475 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VCD_003475 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal VCD_003475 IPR002504 NAD kinase VCD_003475 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal VCD_003476 IPR003395 RecF/RecN/SMC, N-terminal VCD_003476 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003476 IPR004604 DNA recombination/repair protein RecN VCD_003477 IPR007450 Lipoprotein SmpA/OmlA VCD_003477 IPR026592 Outer membrane protein assembly factor BamE VCD_003477 IPR037873 BamE-like VCD_003478 IPR005346 RnfH protein VCD_003478 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VCD_003478 IPR037021 RnfH superfamily VCD_003479 IPR023393 START-like domain superfamily VCD_003479 IPR005031 Coenzyme Q-binding protein COQ10, START domain VCD_003480 IPR023620 Small protein B VCD_003480 IPR000037 SsrA-binding protein VCD_003480 IPR020081 SsrA-binding protein, conserved site VCD_003484 IPR042279 Peptidase M60, enhancin-like domain 3 VCD_003484 IPR031161 Peptidase family M60 domain VCD_003484 IPR025385 Domain of unknown function DUF4092 VCD_003484 IPR035423 M60-like domain, N-terminal VCD_003486 IPR011055 Duplicated hybrid motif VCD_003486 IPR007340 Opacity-associated protein A VCD_003486 IPR016047 Peptidase M23 VCD_003488 IPR029151 Periplasmic sensor-like domain superfamily VCD_003488 IPR004090 Chemotaxis methyl-accepting receptor VCD_003488 IPR033479 Double Cache domain 1 VCD_003488 IPR003660 HAMP domain VCD_003488 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_003488 IPR000727 Target SNARE coiled-coil homology domain VCD_003489 IPR014032 Peptidase A24A, prepilin type IV, bacterial VCD_003489 IPR000045 Prepilin type IV endopeptidase, peptidase domain VCD_003489 IPR010627 Peptidase A24A, N-terminal VCD_003490 IPR018062 HTH domain AraC-type, conserved site VCD_003490 IPR018060 DNA binding HTH domain, AraC-type VCD_003490 IPR009057 Homeobox-like domain superfamily VCD_003490 IPR020449 Transcription regulator HTH, AraC- type VCD_003491 IPR009405 Vibrio cholerae toxin co-regulated pilus biosynthesis F VCD_003492 IPR003004 GspF/PilC family VCD_003492 IPR001992 Type II secretion system conserved site VCD_003492 IPR018076 Type II secretion system F domain VCD_003492 IPR042094 Type II secretion system F domain superfamily VCD_003493 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003493 IPR001482 Type II/IV secretion system protein VCD_003494 IPR020213 Toxin coregulated pilus biosynthesis protein TcpS VCD_003498 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal VCD_003500 IPR012902 Prokaryotic N-terminal methylation site VCD_003500 IPR010271 Toxin-coregulated pilus subunit TcpA VCD_003502 IPR016032 Signal transduction response regulator, C-terminal effector VCD_003502 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003502 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_003503 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VCD_003503 IPR029151 Periplasmic sensor-like domain superfamily VCD_003504 IPR036249 Thioredoxin-like superfamily VCD_003504 IPR013740 Redoxin VCD_003504 IPR002065 Thiol peroxidase Tpx VCD_003504 IPR018219 Thiol peroxidase conserved site VCD_003504 IPR013766 Thioredoxin domain VCD_003507 IPR003961 Fibronectin type III VCD_003507 IPR036116 Fibronectin type III superfamily VCD_003507 IPR013783 Immunoglobulin-like fold VCD_003507 IPR019503 Peptidase M66 domain VCD_003507 IPR022218 ToxR activated gene A lipoprotein domain VCD_003508 IPR015590 Aldehyde dehydrogenase domain VCD_003508 IPR016160 Aldehyde dehydrogenase, cysteine active site VCD_003508 IPR016163 Aldehyde dehydrogenase, C-terminal VCD_003508 IPR016161 Aldehyde/histidinol dehydrogenase VCD_003508 IPR016162 Aldehyde dehydrogenase, N-terminal VCD_003508 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VCD_003519 IPR028348 FAD dependent protein VCD_003519 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_003521 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_003521 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_003521 IPR000813 7Fe ferredoxin VCD_003521 IPR022569 Ferredoxin, C-terminal VCD_003522 IPR029028 Alpha/beta knot methyltransferases VCD_003522 IPR029064 50S ribosomal protein L30e-like VCD_003522 IPR001537 tRNA/rRNA methyltransferase, SpoU type VCD_003522 IPR013123 RNA 2-O ribose methyltransferase, substrate binding VCD_003522 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCD_003524 IPR002736 Triphosphoribosyl-dephospho-CoA protein VCD_003524 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG VCD_003525 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VCD_003526 IPR006472 Citrate lyase, alpha subunit VCD_003526 IPR037171 NagB/RpiA transferase-like VCD_003527 IPR005000 HpcH/HpaI aldolase/citrate lyase domain VCD_003527 IPR011206 Citrate lyase beta subunit-like VCD_003527 IPR006475 Citrate lyase, beta subunit, bacteria VCD_003527 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_003527 IPR040442 Pyruvate kinase-like domain superfamily VCD_003528 IPR006495 Citrate lyase acyl carrier protein CitD VCD_003528 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein VCD_003529 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003529 IPR000182 GNAT domain VCD_003529 IPR004821 Cytidyltransferase-like domain VCD_003529 IPR013166 Citrate lyase ligase, C-terminal VCD_003529 IPR005216 Citrate lyase ligase VCD_003529 IPR016181 Acyl-CoA N-acyltransferase VCD_003530 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes VCD_003530 IPR004679 2-hydroxycarboxylate transporter VCD_003531 IPR023424 Oxaloacetate decarboxylase gamma chain, probable VCD_003531 IPR005899 Sodium ion-translocating decarboxylase VCD_003532 IPR000089 Biotin/lipoyl attachment VCD_003532 IPR003379 Carboxylase, conserved domain VCD_003532 IPR005776 Oxaloacetate decarboxylase, alpha subunit VCD_003532 IPR000891 Pyruvate carboxyltransferase VCD_003532 IPR011053 Single hybrid motif VCD_003532 IPR001882 Biotin-binding site VCD_003532 IPR013785 Aldolase-type TIM barrel VCD_003533 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit VCD_003534 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB VCD_003534 IPR029151 Periplasmic sensor-like domain superfamily VCD_003534 IPR035965 PAS domain superfamily VCD_003534 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003534 IPR000014 PAS domain VCD_003534 IPR005467 Histidine kinase domain VCD_003534 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003534 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003534 IPR033463 Single cache domain 3 VCD_003536 IPR011006 CheY-like superfamily VCD_003536 IPR001789 Signal transduction response regulator, receiver domain VCD_003536 IPR028141 Transcriptional regulator VCD_003536 IPR024187 Signal transduction response regulator, citrate/malate metabolism VCD_003539 IPR005119 LysR, substrate-binding VCD_003539 IPR000847 Transcription regulator HTH, LysR VCD_003539 IPR036390 Winged helix DNA-binding domain superfamily VCD_003539 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003540 IPR023080 D-amino acid dehydrogenase DadA VCD_003540 IPR006076 FAD dependent oxidoreductase VCD_003540 IPR036188 FAD/NAD(P)-binding domain superfamily VCD_003542 IPR001463 Sodium:alanine symporter VCD_003543 IPR029229 Alkyl sulfatase, C-terminal VCD_003543 IPR036527 SCP2 sterol-binding domain superfamily VCD_003543 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VCD_003543 IPR029228 Alkyl sulfatase dimerisation domain VCD_003543 IPR001279 Metallo-beta-lactamase VCD_003543 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VCD_003544 IPR036390 Winged helix DNA-binding domain superfamily VCD_003544 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003544 IPR005119 LysR, substrate-binding VCD_003544 IPR000847 Transcription regulator HTH, LysR VCD_003545 IPR037143 4'-phosphopantetheinyl transferase domain superfamily VCD_003545 IPR003542 Enterobactin synthetase-like, component D VCD_003545 IPR008278 4'-phosphopantetheinyl transferase domain VCD_003545 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain VCD_003546 IPR003593 AAA+ ATPase domain VCD_003546 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003546 IPR003439 ABC transporter-like VCD_003546 IPR017871 ABC transporter, conserved site VCD_003548 IPR000522 ABC transporter, permease protein, BtuC-like VCD_003548 IPR037294 ABC transporter, BtuC-like VCD_003549 IPR000522 ABC transporter, permease protein, BtuC-like VCD_003549 IPR037294 ABC transporter, BtuC-like VCD_003550 IPR002491 ABC transporter periplasmic binding domain VCD_003552 IPR020904 Short-chain dehydrogenase/reductase, conserved site VCD_003552 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase VCD_003552 IPR036291 NAD(P)-binding domain superfamily VCD_003553 IPR005801 ADC synthase VCD_003553 IPR004561 Isochorismate synthase VCD_003553 IPR015890 Chorismate-utilising enzyme, C-terminal VCD_003554 IPR025110 AMP-binding enzyme, C-terminal domain VCD_003554 IPR020845 AMP-binding, conserved site VCD_003554 IPR011963 2,3-dihydroxybenzoate-AMP ligase VCD_003554 IPR000873 AMP-dependent synthetase/ligase VCD_003555 IPR009081 Phosphopantetheine binding ACP domain VCD_003555 IPR036736 ACP-like superfamily VCD_003555 IPR016291 Isochorismatase VCD_003555 IPR000868 Isochorismatase-like VCD_003555 IPR036380 Isochorismatase-like superfamily VCD_003556 IPR000791 Acetate transporter GPR1/FUN34/SatP family VCD_003557 IPR003610 Carbohydrate-binding module family 5/12 VCD_003557 IPR009470 Chitinase, C-terminal VCD_003557 IPR011583 Chitinase II VCD_003557 IPR029070 Chitinase insertion domain superfamily VCD_003557 IPR001223 Glycoside hydrolase family 18, catalytic domain VCD_003557 IPR017853 Glycoside hydrolase superfamily VCD_003557 IPR036573 Carbohydrate-binding module superfamily 5/12 VCD_003557 IPR013783 Immunoglobulin-like fold VCD_003558 IPR001674 GMP synthase, C-terminal VCD_003558 IPR004739 GMP synthase, glutamine amidotransferase VCD_003558 IPR022955 GMP synthase VCD_003558 IPR029062 Class I glutamine amidotransferase-like VCD_003558 IPR017926 Glutamine amidotransferase VCD_003558 IPR025777 GMP synthetase ATP pyrophosphatase domain VCD_003558 IPR022310 NAD/GMP synthase VCD_003558 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003559 IPR005990 Inosine-5'-monophosphate dehydrogenase VCD_003559 IPR000644 CBS domain VCD_003559 IPR001093 IMP dehydrogenase/GMP reductase VCD_003559 IPR013785 Aldolase-type TIM barrel VCD_003559 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VCD_003560 IPR025824 OB-fold nucleic acid binding domain VCD_003560 IPR020579 Exonuclease VII, large subunit, C-terminal VCD_003560 IPR003753 Exonuclease VII, large subunit VCD_003563 IPR032859 GTPase Der, C-terminal KH-domain-like VCD_003563 IPR015946 K homology domain-like, alpha/beta VCD_003563 IPR003593 AAA+ ATPase domain VCD_003563 IPR006073 GTP binding domain VCD_003563 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003563 IPR016484 GTP-binding protein EngA VCD_003563 IPR031166 EngA-type guanine nucleotide-binding (G) domain VCD_003563 IPR005225 Small GTP-binding protein domain VCD_003564 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VCD_003564 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VCD_003564 IPR002372 Pyrrolo-quinoline quinone repeat VCD_003564 IPR015943 WD40/YVTN repeat-like-containing domain superfamily VCD_003564 IPR017687 Outer membrane protein assembly factor BamB VCD_003565 IPR018704 Tetratricopeptide repeat-like domain VCD_003565 IPR026039 Uncharacterised protein family UPF0070 VCD_003565 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_003566 IPR036621 Anticodon-binding domain superfamily VCD_003566 IPR033656 Histidyl-anticodon-binding VCD_003566 IPR004154 Anticodon-binding VCD_003566 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain VCD_003566 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit VCD_003566 IPR015807 Histidine-tRNA ligase VCD_003566 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_003567 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial VCD_003567 IPR011005 Dihydropteroate synthase-like VCD_003567 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type VCD_003568 IPR025194 Domain of unknown function DUF4115 VCD_003568 IPR001387 Cro/C1-type helix-turn-helix domain VCD_003568 IPR023690 Cytoskeleton protein RodZ VCD_003568 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_003569 IPR040072 Methyltransferase (Class A) VCD_003569 IPR027492 Dual-specificity RNA methyltransferase RlmN VCD_003569 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr VCD_003569 IPR007197 Radical SAM VCD_003569 IPR013785 Aldolase-type TIM barrel VCD_003570 IPR034907 Nucleoside diphosphate kinase-like domain VCD_003570 IPR036850 Nucleoside diphosphate kinase-like domain superfamily VCD_003570 IPR023005 Nucleoside diphosphate kinase, active site VCD_003570 IPR001564 Nucleoside diphosphate kinase VCD_003571 IPR008330 Peptidase M17, peptidase B VCD_003571 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B VCD_003571 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VCD_003571 IPR001346 Interferon regulatory factor DNA-binding domain VCD_003572 IPR007479 ISC system FeS cluster assembly, IscX VCD_003572 IPR036762 IscX-like superfamily VCD_003573 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VCD_003573 IPR036010 2Fe-2S ferredoxin-like superfamily VCD_003573 IPR001055 Adrenodoxin VCD_003573 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria VCD_003573 IPR018298 Adrenodoxin, iron-sulphur binding site VCD_003573 IPR012675 Beta-grasp domain superfamily VCD_003574 IPR042039 HscA chaperone, nucleotide-binding domain VCD_003574 IPR018181 Heat shock protein 70, conserved site VCD_003574 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VCD_003574 IPR013126 Heat shock protein 70 family VCD_003574 IPR010236 ISC system FeS cluster assembly, HscA chaperone VCD_003574 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VCD_003575 IPR036869 Chaperone J-domain superfamily VCD_003575 IPR004640 Co-chaperone Hsc20 VCD_003575 IPR036386 HscB, C-terminal domain superfamily VCD_003575 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain VCD_003575 IPR001623 DnaJ domain VCD_003576 IPR016092 FeS cluster insertion protein VCD_003576 IPR035903 HesB-like domain superfamily VCD_003576 IPR017870 FeS cluster insertion, C-terminal, conserved site VCD_003576 IPR000361 FeS cluster biogenesis VCD_003576 IPR011302 Iron-binding protein IscA, proteobacteria VCD_003577 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal VCD_003577 IPR011339 ISC system FeS cluster assembly, IscU scaffold VCD_003578 IPR010240 Cysteine desulfurase IscS VCD_003578 IPR000192 Aminotransferase class V domain VCD_003578 IPR016454 Cysteine desulfurase VCD_003578 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VCD_003578 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003578 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003578 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003579 IPR010242 Transcription factor HTH, IscR VCD_003579 IPR036390 Winged helix DNA-binding domain superfamily VCD_003579 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003579 IPR000944 Transcription regulator Rrf2-type VCD_003579 IPR030489 Transcription regulator Rrf2-type, conserved site VCD_003580 IPR001537 tRNA/rRNA methyltransferase, SpoU type VCD_003580 IPR029028 Alpha/beta knot methyltransferases VCD_003580 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCD_003580 IPR004384 RNA methyltransferase TrmJ/LasT VCD_003581 IPR020550 Inositol monophosphatase, conserved site VCD_003581 IPR000760 Inositol monophosphatase-like VCD_003581 IPR020583 Inositol monophosphatase, metal-binding site VCD_003581 IPR033942 Inositol monophosphatase VCD_003581 IPR022337 Inositol monophosphatase, SuhB VCD_003582 IPR005665 Protein-export membrane protein SecF, bacterial VCD_003582 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCD_003582 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VCD_003582 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VCD_003583 IPR027398 SecD export protein N-terminal TM domain VCD_003583 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VCD_003583 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCD_003583 IPR005791 Protein translocase subunit SecD VCD_003583 IPR001036 Acriflavin resistance protein VCD_003583 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VCD_003584 IPR003849 Preprotein translocase YajC VCD_003585 IPR036511 Queuine tRNA-ribosyltransferase-like VCD_003585 IPR004803 tRNA-guanine transglycosylase VCD_003585 IPR002616 tRNA-guanine(15) transglycosylase-like VCD_003586 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA VCD_003586 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily VCD_003586 IPR042118 QueA, domain 1 VCD_003586 IPR042119 QueA, domain 2 VCD_003588 IPR000644 CBS domain VCD_003589 IPR006254 Isocitrate lyase VCD_003589 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VCD_003589 IPR040442 Pyruvate kinase-like domain superfamily VCD_003589 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_003589 IPR039556 ICL/PEPM domain VCD_003591 IPR011076 Malate synthase-like superfamily VCD_003591 IPR006252 Malate synthase A VCD_003591 IPR019830 Malate synthase, conserved site VCD_003591 IPR001465 Malate synthase VCD_003592 IPR000847 Transcription regulator HTH, LysR VCD_003592 IPR036390 Winged helix DNA-binding domain superfamily VCD_003592 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003592 IPR005119 LysR, substrate-binding VCD_003593 IPR019479 Peroxiredoxin, C-terminal VCD_003593 IPR024706 Peroxiredoxin, AhpC-type VCD_003593 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VCD_003593 IPR013766 Thioredoxin domain VCD_003593 IPR036249 Thioredoxin-like superfamily VCD_003594 IPR036822 Copper homeostasis (CutC) domain superfamily VCD_003594 IPR005627 Copper homeostasis protein CutC VCD_003594 IPR023648 Copper homeostasis CutC domain VCD_003596 IPR016898 Polyphosphate kinase 2 VCD_003596 IPR022486 Polyphosphate kinase 2, PA0141 VCD_003596 IPR022488 Polyphosphate kinase-2-related VCD_003596 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003597 IPR026022 PhoU domain VCD_003597 IPR038078 PhoU-like domain superfamily VCD_003597 IPR028366 Phosphate transport system protein PhoU VCD_003598 IPR003439 ABC transporter-like VCD_003598 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003598 IPR003593 AAA+ ATPase domain VCD_003598 IPR017871 ABC transporter, conserved site VCD_003598 IPR005670 Phosphate transport system permease protein 1 VCD_003598 IPR015850 ABC transporter, phosphate import, PstB VCD_003599 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_003599 IPR005672 Phosphate transport system permease protein PstA VCD_003599 IPR035906 MetI-like superfamily VCD_003600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_003600 IPR035906 MetI-like superfamily VCD_003600 IPR011864 Phosphate ABC transporter, permease protein PstC VCD_003601 IPR025200 Polyphosphate kinase C-terminal domain 2 VCD_003601 IPR001736 Phospholipase D/Transphosphatidylase VCD_003601 IPR003414 Polyphosphate kinase VCD_003601 IPR036830 Polyphosphate kinase middle domain superfamily VCD_003601 IPR025198 Polyphosphate kinase N-terminal domain VCD_003601 IPR041108 Polyphosphate kinase, C-terminal domain 1 VCD_003601 IPR024953 Polyphosphate kinase middle domain VCD_003601 IPR036832 Polyphosphate kinase N-terminal domain superfamily VCD_003602 IPR003695 Ppx/GppA phosphatase VCD_003602 IPR022371 Exopolyphosphatase VCD_003602 IPR030673 Pyrophosphatase, GppA/Ppx-type VCD_003603 IPR024370 PBP domain VCD_003603 IPR011862 Phosphate binding protein VCD_003604 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_003604 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR VCD_003604 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003604 IPR000014 PAS domain VCD_003604 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003604 IPR035965 PAS domain superfamily VCD_003604 IPR013767 PAS fold VCD_003604 IPR021766 Phosphate regulon sensor protein PhoR VCD_003604 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_003604 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003604 IPR005467 Histidine kinase domain VCD_003605 IPR011006 CheY-like superfamily VCD_003605 IPR001867 OmpR/PhoB-type DNA-binding domain VCD_003605 IPR039420 Transcriptional regulatory protein WalR-like VCD_003605 IPR001789 Signal transduction response regulator, receiver domain VCD_003605 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003605 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB VCD_003606 IPR007476 Putative exonuclease, RdgC VCD_003608 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCD_003608 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCD_003609 IPR029479 Nitroreductase VCD_003609 IPR000415 Nitroreductase-like VCD_003609 IPR016446 Flavin oxidoreductase Frp family VCD_003611 IPR018368 ClpA/B, conserved site 1 VCD_003611 IPR028299 ClpA/B, conserved site 2 VCD_003611 IPR041546 ClpA/ClpB, AAA lid domain VCD_003611 IPR004176 Clp, N-terminal VCD_003611 IPR003959 ATPase, AAA-type, core VCD_003611 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003611 IPR003593 AAA+ ATPase domain VCD_003611 IPR017730 Chaperonin ClpB VCD_003611 IPR019489 Clp ATPase, C-terminal VCD_003611 IPR036628 Clp, N-terminal domain superfamily VCD_003611 IPR001270 ClpA/B family VCD_003613 IPR006145 Pseudouridine synthase, RsuA/RluA VCD_003613 IPR002942 RNA-binding S4 domain VCD_003613 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_003613 IPR006225 Pseudouridine synthase, RluC/RluD VCD_003613 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VCD_003613 IPR036986 RNA-binding S4 domain superfamily VCD_003614 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_003614 IPR039565 Outer membrane lipoprotein BamD-like VCD_003614 IPR017689 Outer membrane protein assembly factor BamD VCD_003616 IPR003489 Ribosome hibernation promoting factor/RaiA VCD_003616 IPR036567 Ribosome hibernation promotion factor-like VCD_003617 IPR002912 ACT domain VCD_003617 IPR001086 Prephenate dehydratase VCD_003617 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase VCD_003617 IPR036263 Chorismate mutase type II superfamily VCD_003617 IPR036979 Chorismate mutase domain superfamily VCD_003617 IPR002701 Chorismate mutase II, prokaryotic-type VCD_003617 IPR018528 Prephenate dehydratase, conserved site VCD_003617 IPR010952 Chorismate mutase, gammaproteobacteria VCD_003618 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VCD_003618 IPR006059 Bacterial extracellular solute-binding protein VCD_003619 IPR001633 EAL domain VCD_003619 IPR029787 Nucleotide cyclase VCD_003619 IPR003660 HAMP domain VCD_003619 IPR000160 GGDEF domain VCD_003619 IPR035919 EAL domain superfamily VCD_003620 IPR029001 Inosine triphosphate pyrophosphatase-like VCD_003620 IPR002786 Inosine/xanthosine triphosphatase VCD_003620 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VCD_003621 IPR038116 TrpR-like superfamily VCD_003621 IPR010921 Trp repressor/replication initiator VCD_003621 IPR013335 Trp repressor, bacterial VCD_003621 IPR000831 Trp repressor VCD_003622 IPR008258 Transglycosylase SLT domain 1 VCD_003622 IPR000189 Prokaryotic transglycosylase, active site VCD_003622 IPR008939 Lytic transglycosylase, superhelical U-shaped VCD_003622 IPR012289 Lytic transglycosylase, superhelical linker VCD_003622 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily VCD_003622 IPR023346 Lysozyme-like domain superfamily VCD_003623 IPR022374 Energy-dependent translational throttle protein EttA VCD_003623 IPR003593 AAA+ ATPase domain VCD_003623 IPR032781 ABC-transporter extension domain VCD_003623 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003623 IPR017871 ABC transporter, conserved site VCD_003623 IPR003439 ABC transporter-like VCD_003624 IPR009875 PilZ domain VCD_003624 IPR027021 Cyclic di-GMP binding protein, PA4608 type VCD_003625 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VCD_003625 IPR036979 Chorismate mutase domain superfamily VCD_003625 IPR011277 Chorismate mutase, T-protein VCD_003625 IPR036291 NAD(P)-binding domain superfamily VCD_003625 IPR036263 Chorismate mutase type II superfamily VCD_003625 IPR002701 Chorismate mutase II, prokaryotic-type VCD_003625 IPR003099 Prephenate dehydrogenase VCD_003625 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein VCD_003626 IPR013785 Aldolase-type TIM barrel VCD_003626 IPR006219 DHAP synthase, class 1 VCD_003626 IPR006218 DAHP synthetase I/KDSA VCD_003627 IPR003018 GAF domain VCD_003627 IPR010559 Signal transduction histidine kinase, internal region VCD_003627 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003627 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VCD_003628 IPR007492 LytTR DNA-binding domain VCD_003628 IPR001789 Signal transduction response regulator, receiver domain VCD_003628 IPR011006 CheY-like superfamily VCD_003629 IPR019800 Glycoside hydrolase, family 3, active site VCD_003629 IPR022956 Beta-hexosaminidase, bacterial VCD_003629 IPR001764 Glycoside hydrolase, family 3, N-terminal VCD_003629 IPR017853 Glycoside hydrolase superfamily VCD_003629 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily VCD_003630 IPR005338 Anhydro-N-acetylmuramic acid kinase VCD_003631 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein VCD_003631 IPR001347 Sugar isomerase (SIS) VCD_003631 IPR005486 Glucokinase regulatory protein, conserved site VCD_003631 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VCD_003634 IPR003706 CstA, N-terminal domain VCD_003635 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase VCD_003636 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VCD_003637 IPR001872 Peptidase A8, signal peptidase II VCD_003638 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VCD_003638 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VCD_003638 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VCD_003638 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_003638 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain VCD_003638 IPR002301 Isoleucine-tRNA ligase VCD_003638 IPR010663 Zinc finger, FPG/IleRS-type VCD_003638 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003638 IPR002300 Aminoacyl-tRNA synthetase, class Ia VCD_003638 IPR023585 Isoleucine-tRNA ligase, type 1 VCD_003639 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003639 IPR023465 Riboflavin kinase domain superfamily VCD_003639 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic VCD_003639 IPR002606 Riboflavin kinase, bacterial VCD_003639 IPR023468 Riboflavin kinase VCD_003639 IPR015864 FAD synthetase VCD_003640 IPR004268 Peptidoglycan biosynthesis protein MurJ VCD_003641 IPR002583 Ribosomal protein S20 VCD_003641 IPR036510 Ribosomal protein S20 superfamily VCD_003642 IPR001845 HTH ArsR-type DNA-binding domain VCD_003642 IPR036390 Winged helix DNA-binding domain superfamily VCD_003642 IPR011991 ArsR-like helix-turn-helix domain VCD_003642 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003643 IPR036390 Winged helix DNA-binding domain superfamily VCD_003643 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003643 IPR000847 Transcription regulator HTH, LysR VCD_003643 IPR005119 LysR, substrate-binding VCD_003645 IPR003841 Sodium-dependent phosphate transport protein VCD_003645 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein VCD_003646 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain VCD_003646 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily VCD_003646 IPR000398 Thymidylate synthase VCD_003646 IPR020940 Thymidylate synthase, active site VCD_003647 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt VCD_003648 IPR002781 Transmembrane protein TauE-like VCD_003649 IPR003018 GAF domain VCD_003649 IPR029016 GAF-like domain superfamily VCD_003649 IPR036637 Phosphohistidine domain superfamily VCD_003649 IPR018274 PEP-utilising enzyme, active site VCD_003649 IPR000121 PEP-utilising enzyme, C-terminal VCD_003649 IPR023151 PEP-utilising enzyme, conserved site VCD_003649 IPR040442 Pyruvate kinase-like domain superfamily VCD_003649 IPR008731 Phosphotransferase system, enzyme I N-terminal VCD_003649 IPR036618 PtsI, HPr-binding domain superfamily VCD_003649 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VCD_003649 IPR008279 PEP-utilising enzyme, mobile domain VCD_003649 IPR006318 Phosphotransferase system, enzyme I-like VCD_003650 IPR022927 RNA pyrophosphohydrolase RppH VCD_003650 IPR000086 NUDIX hydrolase domain VCD_003650 IPR020476 NUDIX hydrolase VCD_003650 IPR015797 NUDIX hydrolase-like domain superfamily VCD_003650 IPR020084 NUDIX hydrolase, conserved site VCD_003651 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II VCD_003651 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily VCD_003651 IPR011335 Restriction endonuclease type II-like VCD_003651 IPR004230 DNA mismatch repair protein MutH VCD_003652 IPR023210 NADP-dependent oxidoreductase domain VCD_003652 IPR020471 Aldo/keto reductase VCD_003652 IPR036812 NADP-dependent oxidoreductase domain superfamily VCD_003654 IPR002197 DNA binding HTH domain, Fis-type VCD_003654 IPR003593 AAA+ ATPase domain VCD_003654 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003654 IPR009057 Homeobox-like domain superfamily VCD_003654 IPR011006 CheY-like superfamily VCD_003654 IPR025944 Sigma-54 interaction domain, conserved site VCD_003654 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_003654 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_003654 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_003654 IPR001789 Signal transduction response regulator, receiver domain VCD_003655 IPR006195 Aminoacyl-tRNA synthetase, class II VCD_003655 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VCD_003655 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal VCD_003655 IPR012340 Nucleic acid-binding, OB-fold VCD_003655 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VCD_003655 IPR002313 Lysine-tRNA ligase, class II VCD_003656 IPR004374 Peptide chain release factor 2 VCD_003656 IPR000352 Peptide chain release factor class I VCD_003656 IPR005139 Peptide chain release factor VCD_003657 IPR004685 Branched-chain amino acid transport system II carrier protein VCD_003658 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_003658 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003658 IPR007848 Methyltransferase small domain VCD_003658 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase VCD_003659 IPR001650 Helicase, C-terminal VCD_003659 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_003659 IPR028621 ATP-dependent RNA helicase SrmB VCD_003659 IPR011545 DEAD/DEAH box helicase domain VCD_003659 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003659 IPR014014 RNA helicase, DEAD-box type, Q motif VCD_003659 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCD_003660 IPR004548 Peptide chain release factor 3 VCD_003660 IPR005225 Small GTP-binding protein domain VCD_003660 IPR000795 Transcription factor, GTP-binding domain VCD_003660 IPR004161 Translation elongation factor EFTu-like, domain 2 VCD_003660 IPR009000 Translation protein, beta-barrel domain superfamily VCD_003660 IPR041732 Peptide chain release factor 3, GTP-binding domain VCD_003660 IPR031157 Tr-type G domain, conserved site VCD_003660 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003660 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VCD_003660 IPR032090 Peptide chain release factor 3, C-terminal VCD_003660 IPR035647 EF-G domain III/V-like VCD_003661 IPR036286 LexA/Signal peptidase-like superfamily VCD_003661 IPR015927 Peptidase S24/S26A/S26B/S26C VCD_003661 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VCD_003661 IPR001387 Cro/C1-type helix-turn-helix domain VCD_003661 IPR039418 LexA-like VCD_003668 IPR010927 Type IV conjugative transfer system protein TraH VCD_003670 IPR004107 Integrase, SAM-like, N-terminal VCD_003670 IPR011010 DNA breaking-rejoining enzyme, catalytic core VCD_003670 IPR013762 Integrase-like, catalytic domain superfamily VCD_003670 IPR002104 Integrase, catalytic domain VCD_003670 IPR011946 Integrase, integron-type VCD_003670 IPR010998 Integrase/recombinase, N-terminal VCD_003671 IPR001796 Dihydrofolate reductase domain VCD_003671 IPR017925 Dihydrofolate reductase conserved site VCD_003671 IPR024072 Dihydrofolate reductase-like domain superfamily VCD_003671 IPR012259 Dihydrofolate reductase VCD_003673 IPR018060 DNA binding HTH domain, AraC-type VCD_003673 IPR014710 RmlC-like jelly roll fold VCD_003673 IPR020449 Transcription regulator HTH, AraC- type VCD_003673 IPR009057 Homeobox-like domain superfamily VCD_003673 IPR018062 HTH domain AraC-type, conserved site VCD_003677 IPR025657 RadC-like JAB domain VCD_003677 IPR037518 MPN domain VCD_003677 IPR020891 Uncharacterised protein family UPF0758, conserved site VCD_003677 IPR001405 Uncharacterised protein family UPF0758 VCD_003678 IPR002035 von Willebrand factor, type A VCD_003678 IPR036465 von Willebrand factor A-like domain superfamily VCD_003682 IPR011704 ATPase, dynein-related, AAA domain VCD_003682 IPR013615 CbbQ/NirQ/NorQ, C-terminal VCD_003682 IPR001270 ClpA/B family VCD_003682 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003682 IPR003593 AAA+ ATPase domain VCD_003686 IPR011344 Single-stranded DNA-binding protein VCD_003686 IPR000424 Primosome PriB/single-strand DNA-binding VCD_003686 IPR012340 Nucleic acid-binding, OB-fold VCD_003691 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VCD_003692 IPR009649 TraU VCD_003694 IPR036286 LexA/Signal peptidase-like superfamily VCD_003694 IPR019533 Peptidase S26 VCD_003694 IPR000223 Peptidase S26A, signal peptidase I VCD_003694 IPR019758 Peptidase S26A, signal peptidase I, conserved site VCD_003694 IPR019756 Peptidase S26A, signal peptidase I, serine active site VCD_003694 IPR019757 Peptidase S26A, signal peptidase I, lysine active site VCD_003697 IPR013766 Thioredoxin domain VCD_003697 IPR017937 Thioredoxin, conserved site VCD_003697 IPR036249 Thioredoxin-like superfamily VCD_003697 IPR012336 Thioredoxin-like fold VCD_003697 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VCD_003697 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily VCD_003697 IPR033954 Disulphide bond isomerase, DsbC/G VCD_003698 IPR025944 Sigma-54 interaction domain, conserved site VCD_003698 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCD_003698 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCD_003698 IPR001789 Signal transduction response regulator, receiver domain VCD_003698 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003698 IPR002078 RNA polymerase sigma factor 54 interaction domain VCD_003698 IPR003593 AAA+ ATPase domain VCD_003698 IPR002197 DNA binding HTH domain, Fis-type VCD_003698 IPR011006 CheY-like superfamily VCD_003698 IPR009057 Homeobox-like domain superfamily VCD_003715 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003725 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain VCD_003725 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain VCD_003725 IPR013520 Exonuclease, RNase T/DNA polymerase III VCD_003725 IPR004013 PHP domain VCD_003725 IPR036397 Ribonuclease H superfamily VCD_003725 IPR024754 DNA polymerase III polC-like, N-terminal domain II VCD_003725 IPR029460 DNA polymerase, helix-hairpin-helix motif VCD_003725 IPR003141 Polymerase/histidinol phosphatase, N-terminal VCD_003725 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type VCD_003725 IPR012337 Ribonuclease H-like superfamily VCD_003725 IPR040982 DNA polymerase III alpha subunit finger domain VCD_003726 IPR039418 LexA-like VCD_003726 IPR015927 Peptidase S24/S26A/S26B/S26C VCD_003726 IPR036286 LexA/Signal peptidase-like superfamily VCD_003726 IPR006197 Peptidase S24, LexA-like VCD_003727 IPR025188 Domain of unknown function DUF4113 VCD_003727 IPR001126 UmuC domain VCD_003727 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VCD_003727 IPR017961 DNA polymerase, Y-family, little finger domain VCD_003730 IPR011005 Dihydropteroate synthase-like VCD_003730 IPR000489 Pterin-binding domain VCD_003730 IPR006390 Dihydropteroate synthase VCD_003731 IPR011009 Protein kinase-like domain superfamily VCD_003731 IPR002575 Aminoglycoside phosphotransferase VCD_003731 IPR024165 Aminoglycoside 3-phosphotransferase VCD_003732 IPR011009 Protein kinase-like domain superfamily VCD_003732 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase VCD_003734 IPR002524 Cation efflux protein VCD_003734 IPR036837 Cation efflux protein, cytoplasmic domain superfamily VCD_003734 IPR023500 Zinc transporter ZitB VCD_003734 IPR027469 Cation efflux transmembrane domain superfamily VCD_003736 IPR002575 Aminoglycoside phosphotransferase VCD_003736 IPR024165 Aminoglycoside 3-phosphotransferase VCD_003736 IPR011009 Protein kinase-like domain superfamily VCD_003737 IPR004111 Tetracycline repressor TetR, C-terminal VCD_003737 IPR001647 DNA-binding HTH domain, TetR-type VCD_003737 IPR003012 Tetracycline transcriptional regulator, TetR VCD_003737 IPR009057 Homeobox-like domain superfamily VCD_003737 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VCD_003737 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VCD_003738 IPR020846 Major facilitator superfamily domain VCD_003738 IPR036259 MFS transporter superfamily VCD_003738 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG VCD_003738 IPR005829 Sugar transporter, conserved site VCD_003738 IPR011701 Major facilitator superfamily VCD_003738 IPR004734 Multidrug resistance protein VCD_003739 IPR005119 LysR, substrate-binding VCD_003739 IPR000847 Transcription regulator HTH, LysR VCD_003739 IPR036388 Winged helix-like DNA-binding domain superfamily VCD_003739 IPR036390 Winged helix DNA-binding domain superfamily VCD_003740 IPR011701 Major facilitator superfamily VCD_003740 IPR020846 Major facilitator superfamily domain VCD_003740 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VCD_003740 IPR036259 MFS transporter superfamily VCD_003745 IPR017961 DNA polymerase, Y-family, little finger domain VCD_003745 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VCD_003745 IPR025188 Domain of unknown function DUF4113 VCD_003745 IPR001126 UmuC domain VCD_003752 IPR009000 Translation protein, beta-barrel domain superfamily VCD_003752 IPR000795 Transcription factor, GTP-binding domain VCD_003752 IPR004548 Peptide chain release factor 3 VCD_003752 IPR041732 Peptide chain release factor 3, GTP-binding domain VCD_003752 IPR035647 EF-G domain III/V-like VCD_003752 IPR005225 Small GTP-binding protein domain VCD_003752 IPR031157 Tr-type G domain, conserved site VCD_003752 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003752 IPR004161 Translation elongation factor EFTu-like, domain 2 VCD_003752 IPR032090 Peptide chain release factor 3, C-terminal VCD_003752 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VCD_003753 IPR029787 Nucleotide cyclase VCD_003753 IPR001633 EAL domain VCD_003753 IPR035919 EAL domain superfamily VCD_003753 IPR000160 GGDEF domain VCD_003753 IPR005330 MHYT domain VCD_003756 IPR000182 GNAT domain VCD_003756 IPR016181 Acyl-CoA N-acyltransferase VCD_003758 IPR000160 GGDEF domain VCD_003758 IPR001633 EAL domain VCD_003758 IPR035919 EAL domain superfamily VCD_003758 IPR005330 MHYT domain VCD_003758 IPR029787 Nucleotide cyclase VCD_003763 IPR011990 Tetratricopeptide-like helical domain superfamily VCD_003763 IPR013105 Tetratricopeptide repeat 2 VCD_003763 IPR019734 Tetratricopeptide repeat VCD_003763 IPR023605 Lipoprotein NlpI VCD_003763 IPR013026 Tetratricopeptide repeat-containing domain VCD_003764 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain VCD_003764 IPR027408 PNPase/RNase PH domain superfamily VCD_003764 IPR003029 S1 domain VCD_003764 IPR022967 RNA-binding domain, S1 VCD_003764 IPR015847 Exoribonuclease, phosphorolytic domain 2 VCD_003764 IPR036345 Exoribonuclease, PH domain 2 superfamily VCD_003764 IPR004087 K Homology domain VCD_003764 IPR001247 Exoribonuclease, phosphorolytic domain 1 VCD_003764 IPR012340 Nucleic acid-binding, OB-fold VCD_003764 IPR020568 Ribosomal protein S5 domain 2-type fold VCD_003764 IPR004088 K Homology domain, type 1 VCD_003764 IPR036612 K Homology domain, type 1 superfamily VCD_003764 IPR012162 Polyribonucleotide nucleotidyltransferase VCD_003765 IPR009068 S15/NS1, RNA-binding VCD_003765 IPR005290 Ribosomal protein S15, bacterial-type VCD_003765 IPR000589 Ribosomal protein S15 VCD_003766 IPR020103 Pseudouridine synthase, catalytic domain superfamily VCD_003766 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal VCD_003766 IPR002501 Pseudouridine synthase II, N-terminal VCD_003766 IPR015947 PUA-like superfamily VCD_003766 IPR036974 PUA domain superfamily VCD_003766 IPR032819 tRNA pseudouridylate synthase B, C-terminal VCD_003766 IPR014780 tRNA pseudouridine synthase II, TruB VCD_003767 IPR000238 Ribosome-binding factor A VCD_003767 IPR023799 Ribosome-binding factor A domain superfamily VCD_003767 IPR015946 K homology domain-like, alpha/beta VCD_003767 IPR020053 Ribosome-binding factor A, conserved site VCD_003768 IPR000178 Translation initiation factor aIF-2, bacterial-like VCD_003768 IPR009000 Translation protein, beta-barrel domain superfamily VCD_003768 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VCD_003768 IPR023115 Translation initiation factor IF- 2, domain 3 VCD_003768 IPR015760 Translation initiation factor IF- 2 VCD_003768 IPR000795 Transcription factor, GTP-binding domain VCD_003768 IPR005225 Small GTP-binding protein domain VCD_003768 IPR009061 Putative DNA-binding domain superfamily VCD_003768 IPR013575 Initiation factor 2 associated domain, bacterial VCD_003768 IPR006847 Translation initiation factor IF-2, N-terminal VCD_003768 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003769 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical VCD_003769 IPR015946 K homology domain-like, alpha/beta VCD_003769 IPR003029 S1 domain VCD_003769 IPR025249 KH domain, NusA-like VCD_003769 IPR013735 Transcription factor NusA, N-terminal VCD_003769 IPR009019 K homology domain superfamily, prokaryotic type VCD_003769 IPR012340 Nucleic acid-binding, OB-fold VCD_003769 IPR030842 Transcription termination/antitermination protein NusA, bacterial VCD_003769 IPR036555 NusA, N-terminal domain superfamily VCD_003769 IPR022967 RNA-binding domain, S1 VCD_003769 IPR010214 Transcription termination factor NusA, C-terminal duplication VCD_003769 IPR010213 Transcription termination factor NusA VCD_003770 IPR028989 Ribosome maturation factor RimP, N-terminal VCD_003770 IPR035956 RimP, N-terminal domain superfamily VCD_003770 IPR003728 Ribosome maturation factor RimP VCD_003770 IPR028998 Ribosome maturation factor RimP, C-terminal VCD_003770 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VCD_003771 IPR004692 Preprotein translocase SecG subunit VCD_003772 IPR006352 Phosphoglucosamine mutase, bacterial type VCD_003772 IPR005841 Alpha-D-phosphohexomutase superfamily VCD_003772 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VCD_003772 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VCD_003772 IPR005843 Alpha-D-phosphohexomutase, C-terminal VCD_003772 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VCD_003772 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VCD_003772 IPR016066 Alpha-D-phosphohexomutase, conserved site VCD_003772 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VCD_003773 IPR000489 Pterin-binding domain VCD_003773 IPR011005 Dihydropteroate synthase-like VCD_003773 IPR006390 Dihydropteroate synthase VCD_003774 IPR037219 Peptidase M41-like VCD_003774 IPR000642 Peptidase M41 VCD_003774 IPR011546 Peptidase M41, FtsH extracellular VCD_003774 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003774 IPR005936 Peptidase, FtsH VCD_003774 IPR003960 ATPase, AAA-type, conserved site VCD_003774 IPR003959 ATPase, AAA-type, core VCD_003774 IPR003593 AAA+ ATPase domain VCD_003774 IPR041569 AAA ATPase, AAA+ lid domain VCD_003775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003775 IPR015507 Ribosomal RNA large subunit methyltransferase E VCD_003775 IPR002877 Ribosomal RNA methyltransferase FtsJ domain VCD_003776 IPR035920 YhbY-like superfamily VCD_003776 IPR017924 RNA-binding protein YhbY VCD_003776 IPR001890 RNA-binding, CRM domain VCD_003777 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VCD_003777 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VCD_003777 IPR006359 Transcription elongation factor GreA VCD_003777 IPR028624 Transcription elongation factor GreA/GreB VCD_003777 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily VCD_003777 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VCD_003777 IPR023459 Transcription elongation factor GreA/GreB family VCD_003777 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VCD_003778 IPR033900 Porin domain, Gram-negative type VCD_003778 IPR023614 Porin domain superfamily VCD_003779 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C VCD_003779 IPR012338 Beta-lactamase/transpeptidase-like VCD_003780 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 VCD_003780 IPR002307 Tyrosine-tRNA ligase VCD_003780 IPR036986 RNA-binding S4 domain superfamily VCD_003780 IPR002942 RNA-binding S4 domain VCD_003780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003780 IPR002305 Aminoacyl-tRNA synthetase, class Ic VCD_003780 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VCD_003780 IPR024088 Tyrosine-tRNA ligase, bacterial-type VCD_003781 IPR016047 Peptidase M23 VCD_003781 IPR007340 Opacity-associated protein A VCD_003781 IPR011055 Duplicated hybrid motif VCD_003782 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCD_003782 IPR001036 Acriflavin resistance protein VCD_003784 IPR000361 FeS cluster biogenesis VCD_003784 IPR016092 FeS cluster insertion protein VCD_003784 IPR017870 FeS cluster insertion, C-terminal, conserved site VCD_003784 IPR023063 FeS cluster insertion protein ErpA VCD_003784 IPR035903 HesB-like domain superfamily VCD_003785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VCD_003785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VCD_003785 IPR015424 Pyridoxal phosphate-dependent transferase VCD_003785 IPR005814 Aminotransferase class-III VCD_003785 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase VCD_003786 IPR002549 Transmembrane protein TqsA-like VCD_003787 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCD_003787 IPR007848 Methyltransferase small domain VCD_003787 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VCD_003787 IPR013675 Methyltransferase small, N-terminal VCD_003787 IPR023543 rRNA small subunit methyltransferase C VCD_003788 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VCD_003788 IPR029151 Periplasmic sensor-like domain superfamily VCD_003788 IPR015387 LuxQ, periplasmic VCD_003788 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VCD_003788 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VCD_003788 IPR035965 PAS domain superfamily VCD_003788 IPR005467 Histidine kinase domain VCD_003788 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VCD_003788 IPR003594 Histidine kinase/HSP90-like ATPase VCD_003788 IPR011006 CheY-like superfamily VCD_003788 IPR001789 Signal transduction response regulator, receiver domain VCD_003789 IPR039424 Solute-binding protein family 5 VCD_003789 IPR000914 Solute-binding protein family 5 domain VCD_003789 IPR023765 Solute-binding protein family 5, conserved site VCD_003789 IPR030678 Peptide/nickel binding protein, MppA-type VCD_003790 IPR035906 MetI-like superfamily VCD_003790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_003791 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCD_003791 IPR035906 MetI-like superfamily VCD_003791 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VCD_003792 IPR003439 ABC transporter-like VCD_003792 IPR017871 ABC transporter, conserved site VCD_003792 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_003792 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003792 IPR003593 AAA+ ATPase domain VCD_003793 IPR017871 ABC transporter, conserved site VCD_003793 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VCD_003793 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003793 IPR003439 ABC transporter-like VCD_003793 IPR003593 AAA+ ATPase domain VCD_003795 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VCD_003796 IPR029018 Beta-hexosaminidase-like, domain 2 VCD_003796 IPR017853 Glycoside hydrolase superfamily VCD_003796 IPR015883 Glycoside hydrolase family 20, catalytic domain VCD_003796 IPR025705 Beta-hexosaminidase VCD_003796 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VCD_003797 IPR010383 Glycosyl hydrolase 94 VCD_003797 IPR037828 N,N'-diacetylchitobiose phosphorylase, N-terminal VCD_003797 IPR033432 Glycosyl hydrolase 36, catalytic domain VCD_003797 IPR011013 Galactose mutarotase-like domain superfamily VCD_003797 IPR009342 Putative carbohydrate binding domain VCD_003797 IPR008928 Six-hairpin glycosidase superfamily VCD_003797 IPR012341 Six-hairpin glycosidase-like superfamily VCD_003797 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VCD_003798 IPR005841 Alpha-D-phosphohexomutase superfamily VCD_003798 IPR016066 Alpha-D-phosphohexomutase, conserved site VCD_003798 IPR006352 Phosphoglucosamine mutase, bacterial type VCD_003798 IPR005843 Alpha-D-phosphohexomutase, C-terminal VCD_003798 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VCD_003798 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VCD_003798 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VCD_003798 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VCD_003798 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VCD_003799 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003799 IPR008995 Molybdate/tungstate binding, C-terminal VCD_003799 IPR017871 ABC transporter, conserved site VCD_003799 IPR015853 ABC transporter, ferric cation import, FbpC VCD_003799 IPR013611 Transport-associated OB, type 2 VCD_003799 IPR003593 AAA+ ATPase domain VCD_003799 IPR003439 ABC transporter-like VCD_003801 IPR026045 Ferric binding protein VCD_003801 IPR006059 Bacterial extracellular solute-binding protein VCD_003802 IPR024041 Ammonium transporter AmtB-like domain VCD_003802 IPR018047 Ammonium transporter, conserved site VCD_003802 IPR029020 Ammonium/urea transporter VCD_003802 IPR001905 Ammonium transporter VCD_003803 IPR002187 Nitrogen regulatory protein PII VCD_003803 IPR002332 Nitrogen regulatory protein P-II, urydylation site VCD_003803 IPR017918 Nitrogen regulatory protein PII, conserved site VCD_003803 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VCD_003803 IPR011322 Nitrogen regulatory PII-like, alpha/beta VCD_003804 IPR008249 Uncharacterised protein family UPF0231 VCD_003805 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VCD_003805 IPR018136 Aconitase family, 4Fe-4S cluster binding site VCD_003805 IPR036008 Aconitase, iron-sulfur domain VCD_003805 IPR004406 Aconitase B VCD_003805 IPR015933 Aconitase B, HEAT-like domain VCD_003805 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCD_003805 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VCD_003805 IPR015929 Aconitase B, swivel VCD_003805 IPR036288 Aconitase B, HEAT-like domain superfamily VCD_003805 IPR015932 Aconitase, domain 2 VCD_003806 IPR001423 Lysophospholipase patatin, conserved site VCD_003806 IPR002641 Patatin-like phospholipase domain VCD_003806 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VCD_003807 IPR012338 Beta-lactamase/transpeptidase-like VCD_003807 IPR028166 Bifunctional transglycosylase second domain VCD_003807 IPR001264 Glycosyl transferase, family 51 VCD_003807 IPR023346 Lysozyme-like domain superfamily VCD_003807 IPR001460 Penicillin-binding protein, transpeptidase VCD_003807 IPR036950 Penicillin binding protein transglycosylase domain VCD_003807 IPR011813 Penicillin-binding protein 1B VCD_003808 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCD_003808 IPR007502 Helicase-associated domain VCD_003808 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCD_003808 IPR001650 Helicase, C-terminal VCD_003808 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VCD_003808 IPR011545 DEAD/DEAH box helicase domain VCD_003808 IPR010225 ATP-dependent helicase HrpB VCD_003810 IPR005224 Sugar fermentation stimulation protein VCD_003810 IPR041465 SfsA, N-terminal OB domain VCD_003810 IPR040452 Sugar fermentation stimulation protein, C-terminal VCD_003811 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VCD_003811 IPR037187 DksA, N-terminal domain superfamily VCD_003811 IPR012784 RNA polymerase-binding transcription factor DksA VCD_003811 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VCD_003811 IPR000962 Zinc finger, DksA/TraR C4-type VCD_003812 IPR022380 Glutamyl-Q tRNA(Asp) synthetase VCD_003812 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VCD_003812 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCD_003812 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VCD_003813 IPR010206 Poly(A) polymerase I VCD_003813 IPR025866 Polymerase A arginine-rich C-terminal domain VCD_003813 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VCD_003813 IPR002646 Poly A polymerase, head domain VCD_003814 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily VCD_003814 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK