locus-tag class description N16961_VC00001 PF11638 DnaA N-terminal domain N16961_VC00001 PF08299 Bacterial dnaA protein helix-turn-helix N16961_VC00001 PF00308 Bacterial dnaA protein N16961_VC00003 PF02768 DNA polymerase III beta subunit, C-terminal domain N16961_VC00003 PF00712 DNA polymerase III beta subunit, N-terminal domain N16961_VC00003 PF02767 DNA polymerase III beta subunit, central domain N16961_VC00004 PF02463 RecF/RecN/SMC N terminal domain N16961_VC00005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00005 PF01751 Toprim domain N16961_VC00005 PF00986 DNA gyrase B subunit, carboxyl terminus N16961_VC00005 PF00204 DNA gyrase B N16961_VC00005 PF18053 DNA gyrase B subunit insert domain N16961_VC00008 PF00011 Hsp20/alpha crystallin family N16961_VC00009 PF00155 Aminotransferase class I and II N16961_VC00010 PF02092 Glycyl-tRNA synthetase beta subunit N16961_VC00010 PF05746 DALR anticodon binding domain N16961_VC00011 PF02091 Glycyl-tRNA synthetase alpha subunit N16961_VC00013 PF01169 Uncharacterized protein family UPF0016 N16961_VC00015 PF01206 Sulfurtransferase TusA N16961_VC00017 PF00107 Zinc-binding dehydrogenase N16961_VC00017 PF08240 Alcohol dehydrogenase GroES-like domain N16961_VC00018 PF00585 C-terminal regulatory domain of Threonine dehydratase N16961_VC00018 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC00019 PF00920 Dehydratase family N16961_VC00020 PF01063 Amino-transferase class IV N16961_VC00022 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_VC00022 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_VC00022 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VC00023 PF13335 Magnesium chelatase, subunit ChlI C-terminal N16961_VC00023 PF01078 Magnesium chelatase, subunit ChlI N16961_VC00024 PF01553 Acyltransferase N16961_VC00025 PF01323 DSBA-like thioredoxin domain N16961_VC00026 PF01636 Phosphotransferase enzyme family N16961_VC00027 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase N16961_VC00027 PF12801 4Fe-4S binding domain N16961_VC00027 PF13746 4Fe-4S dicluster domain N16961_VC00028 PF06288 Protein of unknown function (DUF1040) N16961_VC00029 PF07070 SpoOM protein N16961_VC00030 PF03006 Haemolysin-III related N16961_VC00032 PF02386 Cation transport protein N16961_VC00033 PF02080 TrkA-C domain N16961_VC00033 PF02254 TrkA-N domain N16961_VC00034 PF01189 16S rRNA methyltransferase RsmB/F N16961_VC00034 PF01029 NusB family N16961_VC00035 PF00551 Formyl transferase N16961_VC00035 PF02911 Formyl transferase, C-terminal domain N16961_VC00036 PF01327 Polypeptide deformylase N16961_VC00037 PF01476 LysM domain N16961_VC00038 PF02481 DNA recombination-mediator protein A N16961_VC00038 PF17782 DprA winged helix domain N16961_VC00039 PF04361 Protein of unknown function (DUF494) N16961_VC00040 PF01396 Topoisomerase DNA binding C4 zinc finger N16961_VC00041 PF02222 ATP-grasp domain N16961_VC00041 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N16961_VC00042 PF00731 AIR carboxylase N16961_VC00043 PF01300 Telomere recombination N16961_VC00044 PF01218 Coproporphyrinogen III oxidase N16961_VC00045 PF08501 Shikimate dehydrogenase substrate binding domain N16961_VC00045 PF01488 Shikimate / quinate 5-dehydrogenase N16961_VC00045 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N16961_VC00047 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC00053 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N16961_VC00055 PF01964 Radical SAM ThiC family N16961_VC00055 PF13667 ThiC-associated domain N16961_VC00056 PF02581 Thiamine monophosphate synthase N16961_VC00057 PF00899 ThiF family N16961_VC00058 PF02597 ThiS family N16961_VC00059 PF05690 Thiazole biosynthesis protein ThiG N16961_VC00060 PF04055 Radical SAM superfamily N16961_VC00060 PF06968 Biotin and Thiamin Synthesis associated domain N16961_VC00061 PF00557 Metallopeptidase family M24 N16961_VC00061 PF01321 Creatinase/Prolidase N-terminal domain N16961_VC00061 PF00557 Metallopeptidase family M24 N16961_VC00061 PF01321 Creatinase/Prolidase N-terminal domain N16961_VC00062 PF03466 LysR substrate binding domain N16961_VC00062 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00063 PF07690 Major Facilitator Superfamily N16961_VC00065 PF01037 Lrp/AsnC ligand binding domain N16961_VC00066 PF00563 EAL domain N16961_VC00066 PF08448 PAS fold N16961_VC00066 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00067 PF04445 Putative SAM-dependent methyltransferase N16961_VC00069 PF00892 EamA-like transporter family N16961_VC00070 PF00582 Universal stress protein family N16961_VC00071 PF00210 Ferritin-like domain N16961_VC00072 PF10625 Universal stress protein B (UspB) N16961_VC00075 PF02646 RmuC family N16961_VC00076 PF01209 ubiE/COQ5 methyltransferase family N16961_VC00077 PF02036 SCP-2 sterol transfer family N16961_VC00078 PF03109 ABC1 family N16961_VC00079 PF02416 mttA/Hcf106 family N16961_VC00080 PF02416 mttA/Hcf106 family N16961_VC00081 PF00902 Sec-independent protein translocase protein (TatC) N16961_VC00082 PF00034 Cytochrome c N16961_VC00082 PF03150 Di-haem cytochrome c peroxidase N16961_VC00083 PF01554 MatE N16961_VC00085 PF00717 Peptidase S24-like N16961_VC00085 PF01726 LexA DNA binding domain N16961_VC00086 PF01553 Acyltransferase N16961_VC00087 PF01040 UbiA prenyltransferase family N16961_VC00088 PF04345 Chorismate lyase N16961_VC00089 PF03748 Flagellar basal body-associated protein FliL N16961_VC00090 PF00672 HAMP domain N16961_VC00090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00090 PF02203 Tar ligand binding domain homologue N16961_VC00091 PF01694 Rhomboid family N16961_VC00091 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease N16961_VC00092 PF00581 Rhodanese-like domain N16961_VC00093 PF01026 TatD related DNase N16961_VC00094 PF00490 Delta-aminolevulinic acid dehydratase N16961_VC00097 PF01367 5'-3' exonuclease, C-terminal SAM fold N16961_VC00097 PF01612 3'-5' exonuclease N16961_VC00097 PF00476 DNA polymerase family A N16961_VC00097 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N16961_VC00099 PF01926 50S ribosome-binding GTPase N16961_VC00100 PF00034 Cytochrome c N16961_VC00102 PF04220 Der GTPase activator (YihI) N16961_VC00103 PF10675 Protein of unknown function (DUF2489) N16961_VC00104 PF06969 HemN C-terminal domain N16961_VC00104 PF04055 Radical SAM superfamily N16961_VC00105 PF07219 HemY protein N-terminus N16961_VC00106 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase N16961_VC00107 PF02602 Uroporphyrinogen-III synthase HemD N16961_VC00108 PF03900 Porphobilinogen deaminase, C-terminal domain N16961_VC00108 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N16961_VC00109 PF01295 Adenylate cyclase, class-I N16961_VC00109 PF12633 Adenylate cyclase NT domain N16961_VC00110 PF01491 Frataxin-like domain N16961_VC00111 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N16961_VC00111 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N16961_VC00112 PF01678 Diaminopimelate epimerase N16961_VC00113 PF04340 Protein of unknown function, DUF484 N16961_VC00114 PF02899 Phage integrase, N-terminal SAM-like domain N16961_VC00114 PF00589 Phage integrase family N16961_VC00115 PF13419 Haloacid dehalogenase-like hydrolase N16961_VC00116 PF00563 EAL domain N16961_VC00116 PF08495 FIST N domain N16961_VC00116 PF10442 FIST C domain N16961_VC00116 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00120 PF12146 Serine aminopeptidase, S33 N16961_VC00121 PF01810 LysE type translocator N16961_VC00122 PF08668 HDOD domain N16961_VC00122 PF00563 EAL domain N16961_VC00123 PF00210 Ferritin-like domain N16961_VC00129 PF02881 SRP54-type protein, helical bundle domain N16961_VC00129 PF00448 SRP54-type protein, GTPase domain N16961_VC00130 PF00005 ABC transporter N16961_VC00131 PF18075 FtsX extracellular domain N16961_VC00132 PF00140 Sigma-70 factor, region 1.2 N16961_VC00132 PF04542 Sigma-70 region 2 N16961_VC00132 PF04545 Sigma-70, region 4 N16961_VC00133 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00133 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VC00134 PF00440 Bacterial regulatory proteins, tetR family N16961_VC00136 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_VC00138 PF00593 TonB dependent receptor N16961_VC00138 PF07715 TonB-dependent Receptor Plug Domain N16961_VC00139 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VC00139 PF00082 Subtilase family N16961_VC00139 PF05922 Peptidase inhibitor I9 N16961_VC00140 PF01177 Asp/Glu/Hydantoin racemase N16961_VC00152 PF00962 Adenosine/AMP deaminase N16961_VC00153 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00153 PF03707 Bacterial signalling protein N terminal repeat N16961_VC00153 PF00563 EAL domain N16961_VC00153 PF13188 PAS domain N16961_VC00154 PF00158 Sigma-54 interaction domain N16961_VC00154 PF02954 Bacterial regulatory protein, Fis family N16961_VC00154 PF00072 Response regulator receiver domain N16961_VC00155 PF00989 PAS fold N16961_VC00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00155 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00157 PF00120 Glutamine synthetase, catalytic domain N16961_VC00157 PF03951 Glutamine synthetase, beta-Grasp domain N16961_VC00161 PF03631 Virulence factor BrkB N16961_VC00162 PF02580 D-Tyr-tRNA(Tyr) deacylase N16961_VC00163 PF00583 Acetyltransferase (GNAT) family N16961_VC00163 PF09500 Putative thioesterase (yiiD_Cterm) N16961_VC00165 PF01293 Phosphoenolpyruvate carboxykinase N16961_VC00166 PF01430 Hsp33 protein N16961_VC00167 PF01479 S4 domain N16961_VC00168 PF11356 Type II secretion system protein C N16961_VC00169 PF03958 Bacterial type II/III secretion system short domain N16961_VC00169 PF00263 Bacterial type II and III secretion system protein N16961_VC00170 PF00437 Type II/IV secretion system protein N16961_VC00171 PF00482 Type II secretion system (T2SS), protein F N16961_VC00172 PF08334 Type II secretion system (T2SS), protein G N16961_VC00172 PF07963 Prokaryotic N-terminal methylation motif N16961_VC00173 PF12019 Type II transport protein GspH N16961_VC00174 PF02501 Type II secretion system (T2SS), protein I N16961_VC00174 PF07963 Prokaryotic N-terminal methylation motif N16961_VC00175 PF07963 Prokaryotic N-terminal methylation motif N16961_VC00175 PF11612 Type II secretion system (T2SS), protein J N16961_VC00176 PF03934 Type II secretion system (T2SS), protein K N16961_VC00177 PF05134 Type II secretion system (T2SS), protein L N16961_VC00177 PF12693 GspL periplasmic domain N16961_VC00178 PF04612 Type II secretion system (T2SS), protein M N16961_VC00179 PF01203 Type II secretion system (T2SS), protein N N16961_VC00180 PF00459 Inositol monophosphatase family N16961_VC00181 PF00293 NUDIX domain N16961_VC00182 PF01106 NifU-like domain N16961_VC00182 PF01521 Iron-sulphur cluster biosynthesis N16961_VC00183 PF00156 Phosphoribosyl transferase domain N16961_VC00184 PF00561 alpha/beta hydrolase fold N16961_VC00186 PF17674 HHH domain N16961_VC00186 PF00575 S1 RNA binding domain N16961_VC00186 PF09371 Tex-like protein N-terminal domain N16961_VC00186 PF16921 Tex protein YqgF-like domain N16961_VC00187 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_VC00187 PF03449 Transcription elongation factor, N-terminal N16961_VC00188 PF00072 Response regulator receiver domain N16961_VC00188 PF00486 Transcriptional regulatory protein, C terminal N16961_VC00189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00189 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00189 PF00672 HAMP domain N16961_VC00190 PF00860 Permease family N16961_VC00191 PF17191 RecG wedge domain N16961_VC00191 PF00271 Helicase conserved C-terminal domain N16961_VC00191 PF00270 DEAD/DEAH box helicase N16961_VC00193 PF04607 Region found in RelA / SpoT proteins N16961_VC00193 PF02824 TGS domain N16961_VC00193 PF13291 ACT domain N16961_VC00194 PF01192 RNA polymerase Rpb6 N16961_VC00195 PF00625 Guanylate kinase N16961_VC00196 PF02592 Putative vitamin uptake transporter N16961_VC00197 PF00474 Sodium:solute symporter family N16961_VC00199 PF03471 Transporter associated domain N16961_VC00199 PF02080 TrkA-C domain N16961_VC00199 PF00999 Sodium/hydrogen exchanger family N16961_VC00200 PF00196 Bacterial regulatory proteins, luxR family N16961_VC00200 PF00072 Response regulator receiver domain N16961_VC00201 PF02683 Cytochrome C biogenesis protein transmembrane region N16961_VC00201 PF11412 Disulphide bond corrector protein DsbC N16961_VC00202 PF11852 Domain of unknown function (DUF3372) N16961_VC00202 PF03714 Bacterial pullanase-associated domain N16961_VC00202 PF18494 Pullulanase Ins domain N16961_VC00202 PF17967 Pullulanase N2 domain N16961_VC00202 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N16961_VC00204 PF03605 Anaerobic c4-dicarboxylate membrane transporter N16961_VC00205 PF10415 Fumarase C C-terminus N16961_VC00205 PF00206 Lyase N16961_VC00206 PF17158 Membrane-associated sensor, integral membrane domain N16961_VC00206 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00207 PF04186 FxsA cytoplasmic membrane protein N16961_VC00208 PF00588 SpoU rRNA Methylase family N16961_VC00209 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N16961_VC00209 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N16961_VC00210 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00210 PF00672 HAMP domain N16961_VC00210 PF16527 Two-component sensor protein CpxA, periplasmic domain N16961_VC00211 PF00486 Transcriptional regulatory protein, C terminal N16961_VC00211 PF00072 Response regulator receiver domain N16961_VC00213 PF01545 Cation efflux family N16961_VC00213 PF16916 Dimerisation domain of Zinc Transporter N16961_VC00214 PF00365 Phosphofructokinase N16961_VC00215 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N16961_VC00216 PF06005 Cell division protein ZapB N16961_VC00217 PF02219 Methylenetetrahydrofolate reductase N16961_VC00218 PF03447 Homoserine dehydrogenase, NAD binding domain N16961_VC00218 PF00742 Homoserine dehydrogenase N16961_VC00218 PF00696 Amino acid kinase family N16961_VC00219 PF01053 Cys/Met metabolism PLP-dependent enzyme N16961_VC00220 PF01340 Met Apo-repressor, MetJ N16961_VC00221 PF00390 Malic enzyme, N-terminal domain N16961_VC00221 PF03949 Malic enzyme, NAD binding domain N16961_VC00222 PF01197 Ribosomal protein L31 N16961_VC00223 PF00271 Helicase conserved C-terminal domain N16961_VC00223 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N16961_VC00223 PF18074 Primosomal protein N C-terminal domain N16961_VC00223 PF17764 3′ DNA-binding domain (3′BD) N16961_VC00223 PF00270 DEAD/DEAH box helicase N16961_VC00224 PF00356 Bacterial regulatory proteins, lacI family N16961_VC00225 PF05036 Sporulation related domain N16961_VC00226 PF00227 Proteasome subunit N16961_VC00227 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC00227 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VC00227 PF07724 AAA domain (Cdc48 subfamily) N16961_VC00228 PF01040 UbiA prenyltransferase family N16961_VC00229 PF03737 Aldolase/RraA N16961_VC00231 PF00121 Triosephosphate isomerase N16961_VC00235 PF00455 DeoR C terminal sensor domain N16961_VC00235 PF08220 DeoR-like helix-turn-helix domain N16961_VC00236 PF00166 Chaperonin 10 Kd subunit N16961_VC00237 PF00118 TCP-1/cpn60 chaperonin family N16961_VC00239 PF04055 Radical SAM superfamily N16961_VC00240 PF09285 Elongation factor P, C-terminal N16961_VC00240 PF08207 Elongation factor P (EF-P) KOW-like domain N16961_VC00240 PF01132 Elongation factor P (EF-P) OB domain N16961_VC00241 PF02313 Fumarate reductase subunit D N16961_VC00242 PF02300 Fumarate reductase subunit C N16961_VC00243 PF13183 4Fe-4S dicluster domain N16961_VC00243 PF13085 2Fe-2S iron-sulfur cluster binding domain N16961_VC00244 PF02910 Fumarate reductase flavoprotein C-term N16961_VC00244 PF00890 FAD binding domain N16961_VC00245 PF00152 tRNA synthetases class II (D, K and N) N16961_VC00246 PF00581 Rhodanese-like domain N16961_VC00247 PF02556 Preprotein translocase subunit SecB N16961_VC00248 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N16961_VC00248 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N16961_VC00249 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC00249 PF06426 Serine acetyltransferase, N-terminal N16961_VC00251 PF00311 Phosphoenolpyruvate carboxylase N16961_VC00252 PF01546 Peptidase family M20/M25/M40 N16961_VC00252 PF07687 Peptidase dimerisation domain N16961_VC00253 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_VC00253 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_VC00254 PF00696 Amino acid kinase family N16961_VC00255 PF00764 Arginosuccinate synthase N16961_VC00256 PF14698 Argininosuccinate lyase C-terminal N16961_VC00256 PF00206 Lyase N16961_VC00258 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VC00258 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00259 PF00462 Glutaredoxin N16961_VC00259 PF08534 Redoxin N16961_VC00260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00260 PF03466 LysR substrate binding domain N16961_VC00261 PF00905 Penicillin binding protein transpeptidase domain N16961_VC00261 PF00912 Transglycosylase N16961_VC00261 PF17092 Penicillin-binding protein OB-like domain N16961_VC00266 PF03958 Bacterial type II/III secretion system short domain N16961_VC00266 PF07660 Secretin and TonB N terminus short domain N16961_VC00266 PF11741 AMIN domain N16961_VC00266 PF00263 Bacterial type II and III secretion system protein N16961_VC00267 PF01202 Shikimate kinase N16961_VC00268 PF01761 3-dehydroquinate synthase N16961_VC00270 PF02086 D12 class N6 adenine-specific DNA methyltransferase N16961_VC00271 PF00834 Ribulose-phosphate 3 epimerase family N16961_VC00272 PF13419 Haloacid dehalogenase-like hydrolase N16961_VC00273 PF00579 tRNA synthetases class I (W and Y) N16961_VC00276 PF00919 Uncharacterized protein family UPF0004 N16961_VC00276 PF18693 TRAM domain N16961_VC00276 PF04055 Radical SAM superfamily N16961_VC00277 PF00117 Glutamine amidotransferase class-I N16961_VC00278 PF00202 Aminotransferase class-III N16961_VC00279 PF04958 Arginine N-succinyltransferase beta subunit N16961_VC00280 PF00171 Aldehyde dehydrogenase family N16961_VC00282 PF00027 Cyclic nucleotide-binding domain N16961_VC00282 PF13545 Crp-like helix-turn-helix domain N16961_VC00283 PF00485 Phosphoribulokinase / Uridine kinase family N16961_VC00284 PF06794 Uncharacterised protein family (UPF0270) N16961_VC00285 PF00561 alpha/beta hydrolase fold N16961_VC00287 PF00005 ABC transporter N16961_VC00287 PF12848 ABC transporter N16961_VC00288 PF02525 Flavodoxin-like fold N16961_VC00289 PF02254 TrkA-N domain N16961_VC00289 PF00999 Sodium/hydrogen exchanger family N16961_VC00291 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC00292 PF01112 Asparaginase N16961_VC00293 PF00709 Adenylosuccinate synthetase N16961_VC00294 PF08238 Sel1 repeat N16961_VC00295 PF11893 Domain of unknown function (DUF3413) N16961_VC00295 PF00884 Sulfatase N16961_VC00296 PF00773 RNB domain N16961_VC00296 PF17876 Cold shock domain N16961_VC00296 PF08206 Ribonuclease B OB domain N16961_VC00296 PF00575 S1 RNA binding domain N16961_VC00296 PF08461 Ribonuclease R winged-helix domain N16961_VC00297 PF08032 RNA 2'-O ribose methyltransferase substrate binding N16961_VC00297 PF00588 SpoU rRNA Methylase family N16961_VC00298 PF00338 Ribosomal protein S10p/S20e N16961_VC00299 PF00297 Ribosomal protein L3 N16961_VC00300 PF00573 Ribosomal protein L4/L1 family N16961_VC00301 PF00276 Ribosomal protein L23 N16961_VC00302 PF00181 Ribosomal Proteins L2, RNA binding domain N16961_VC00302 PF03947 Ribosomal Proteins L2, C-terminal domain N16961_VC00303 PF00203 Ribosomal protein S19 N16961_VC00304 PF00237 Ribosomal protein L22p/L17e N16961_VC00305 PF07650 KH domain N16961_VC00305 PF00189 Ribosomal protein S3, C-terminal domain N16961_VC00306 PF00252 Ribosomal protein L16p/L10e N16961_VC00307 PF00831 Ribosomal L29 protein N16961_VC00308 PF00366 Ribosomal protein S17 N16961_VC00309 PF00238 Ribosomal protein L14p/L23e N16961_VC00310 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N16961_VC00310 PF00467 KOW motif N16961_VC00311 PF00281 Ribosomal protein L5 N16961_VC00311 PF00673 ribosomal L5P family C-terminus N16961_VC00312 PF00253 Ribosomal protein S14p/S29e N16961_VC00313 PF00410 Ribosomal protein S8 N16961_VC00314 PF00347 Ribosomal protein L6 N16961_VC00315 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N16961_VC00316 PF03719 Ribosomal protein S5, C-terminal domain N16961_VC00316 PF00333 Ribosomal protein S5, N-terminal domain N16961_VC00317 PF00327 Ribosomal protein L30p/L7e N16961_VC00318 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N16961_VC00319 PF00344 SecY translocase N16961_VC00320 PF00444 Ribosomal protein L36 N16961_VC00322 PF00416 Ribosomal protein S13/S18 N16961_VC00323 PF00411 Ribosomal protein S11 N16961_VC00324 PF00163 Ribosomal protein S4/S9 N-terminal domain N16961_VC00324 PF01479 S4 domain N16961_VC00325 PF01000 RNA polymerase Rpb3/RpoA insert domain N16961_VC00325 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N16961_VC00325 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N16961_VC00326 PF01196 Ribosomal protein L17 N16961_VC00328 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC00328 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_VC00329 PF04225 Opacity-associated protein A LysM-like domain N16961_VC00329 PF08525 Opacity-associated protein A N-terminal motif N16961_VC00330 PF00892 EamA-like transporter family N16961_VC00331 PF13673 Acetyltransferase (GNAT) domain N16961_VC00332 PF03880 DbpA RNA binding domain N16961_VC00332 PF00271 Helicase conserved C-terminal domain N16961_VC00332 PF00270 DEAD/DEAH box helicase N16961_VC00334 PF00149 Calcineurin-like phosphoesterase N16961_VC00334 PF02872 5'-nucleotidase, C-terminal domain N16961_VC00335 PF14824 Sirohaem biosynthesis protein central N16961_VC00335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N16961_VC00335 PF10414 Sirohaem synthase dimerisation region N16961_VC00336 PF01507 Phosphoadenosine phosphosulfate reductase family N16961_VC00337 PF00009 Elongation factor Tu GTP binding domain N16961_VC00342 PF00005 ABC transporter N16961_VC00344 PF10795 Protein of unknown function (DUF2607) N16961_VC00345 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) N16961_VC00346 PF01625 Peptide methionine sulfoxide reductase N16961_VC00347 PF01103 Surface antigen N16961_VC00347 PF07244 Surface antigen variable number repeat N16961_VC00347 PF17243 POTRA domain TamA domain 1 N16961_VC00348 PF04357 TamB, inner membrane protein subunit of TAM complex N16961_VC00349 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like N16961_VC00350 PF00719 Inorganic pyrophosphatase N16961_VC00351 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N16961_VC00352 PF08245 Mur ligase middle domain N16961_VC00352 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00352 PF01225 Mur ligase family, catalytic domain N16961_VC00353 PF02441 Flavoprotein N16961_VC00355 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC00356 PF00005 ABC transporter N16961_VC00357 PF04751 Protein of unknown function (DUF615) N16961_VC00358 PF01523 Putative modulator of DNA gyrase N16961_VC00359 PF03448 MgtE intracellular N domain N16961_VC00359 PF01769 Divalent cation transporter N16961_VC00359 PF00571 CBS domain N16961_VC00360 PF00381 PTS HPr component phosphorylation site N16961_VC00361 PF03668 P-loop ATPase protein family N16961_VC00362 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VC00363 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N16961_VC00364 PF00309 Sigma-54 factor, Activator interacting domain (AID) N16961_VC00364 PF04963 Sigma-54 factor, core binding domain N16961_VC00364 PF04552 Sigma-54, DNA binding domain N16961_VC00365 PF12399 Branched-chain amino acid ATP-binding cassette transporter N16961_VC00365 PF00005 ABC transporter N16961_VC00366 PF03968 OstA-like protein N16961_VC00369 PF00571 CBS domain N16961_VC00369 PF01380 SIS domain N16961_VC00370 PF01699 Sodium/calcium exchanger protein N16961_VC00371 PF00005 ABC transporter N16961_VC00372 PF02405 Permease MlaE N16961_VC00373 PF02470 MlaD protein N16961_VC00374 PF05494 MlaC protein N16961_VC00376 PF01722 BolA-like protein N16961_VC00377 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N16961_VC00378 PF01553 Acyltransferase N16961_VC00379 PF01042 Endoribonuclease L-PSP N16961_VC00380 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain N16961_VC00380 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain N16961_VC00381 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N16961_VC00381 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N16961_VC00382 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N16961_VC00382 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N16961_VC00383 PF02562 PhoH-like protein N16961_VC00383 PF13638 PIN domain N16961_VC00384 PF00271 Helicase conserved C-terminal domain N16961_VC00384 PF00176 SNF2 family N-terminal domain N16961_VC00384 PF18337 RapA N-terminal Tudor like domain N16961_VC00384 PF12137 RNA polymerase recycling family C-terminal N16961_VC00384 PF18339 RapA N-terminal Tudor like domain 1 N16961_VC00385 PF00849 RNA pseudouridylate synthase N16961_VC00386 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VC00386 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VC00387 PF10458 Valyl tRNA synthetase tRNA binding arm N16961_VC00387 PF08264 Anticodon-binding domain of tRNA N16961_VC00387 PF00133 tRNA synthetases class I (I, L, M and V) N16961_VC00388 PF04364 DNA polymerase III chi subunit, HolC N16961_VC00389 PF02789 Cytosol aminopeptidase family, N-terminal domain N16961_VC00389 PF00883 Cytosol aminopeptidase family, catalytic domain N16961_VC00390 PF03739 Lipopolysaccharide export system permease LptF/LptG N16961_VC00391 PF03739 Lipopolysaccharide export system permease LptF/LptG N16961_VC00394 PF00072 Response regulator receiver domain N16961_VC00402 PF00694 Aconitase C-terminal domain N16961_VC00403 PF00330 Aconitase family (aconitate hydratase) N16961_VC00404 PF00180 Isocitrate/isopropylmalate dehydrogenase N16961_VC00405 PF00682 HMGL-like N16961_VC00405 PF08502 LeuA allosteric (dimerisation) domain N16961_VC00407 PF01569 PAP2 superfamily N16961_VC00409 PF03466 LysR substrate binding domain N16961_VC00409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00410 PF00501 AMP-binding enzyme N16961_VC00411 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_VC00411 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_VC00411 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VC00412 PF10369 Small subunit of acetolactate synthase N16961_VC00413 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VC00413 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VC00413 PF01842 ACT domain N16961_VC00414 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N16961_VC00415 PF01812 5-formyltetrahydrofolate cyclo-ligase family N16961_VC00417 PF05164 Cell division protein ZapA N16961_VC00418 PF03695 Uncharacterised protein family (UPF0149) N16961_VC00419 PF01494 FAD binding domain N16961_VC00420 PF01494 FAD binding domain N16961_VC00423 PF03937 Flavinator of succinate dehydrogenase N16961_VC00425 PF00890 FAD binding domain N16961_VC00425 PF02910 Fumarate reductase flavoprotein C-term N16961_VC00426 PF04542 Sigma-70 region 2 N16961_VC00426 PF08281 Sigma-70, region 4 N16961_VC00427 PF03872 Anti sigma-E protein RseA, N-terminal domain N16961_VC00427 PF03873 Anti sigma-E protein RseA, C-terminal domain N16961_VC00428 PF03888 MucB/RseB N-terminal domain N16961_VC00428 PF17188 MucB/RseB C-terminal domain N16961_VC00430 PF00679 Elongation factor G C-terminus N16961_VC00430 PF00009 Elongation factor Tu GTP binding domain N16961_VC00430 PF06421 GTP-binding protein LepA C-terminus N16961_VC00430 PF03144 Elongation factor Tu domain 2 N16961_VC00431 PF10502 Signal peptidase, peptidase S26 N16961_VC00432 PF00035 Double-stranded RNA binding motif N16961_VC00432 PF14622 Ribonuclease-III-like N16961_VC00433 PF01926 50S ribosome-binding GTPase N16961_VC00433 PF07650 KH domain N16961_VC00434 PF02565 Recombination protein O C terminal N16961_VC00434 PF11967 Recombination protein O N terminal N16961_VC00435 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N16961_VC00436 PF01648 4'-phosphopantetheinyl transferase superfamily N16961_VC00439 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00439 PF00563 EAL domain N16961_VC00440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N16961_VC00440 PF00672 HAMP domain N16961_VC00440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00440 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00440 PF01627 Hpt domain N16961_VC00440 PF00072 Response regulator receiver domain N16961_VC00441 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_VC00441 PF01938 TRAM domain N16961_VC00442 PF13291 ACT domain N16961_VC00442 PF04607 Region found in RelA / SpoT proteins N16961_VC00442 PF02824 TGS domain N16961_VC00443 PF03819 MazG nucleotide pyrophosphohydrolase domain N16961_VC00444 PF00117 Glutamine amidotransferase class-I N16961_VC00444 PF06418 CTP synthase N-terminus N16961_VC00445 PF00113 Enolase, C-terminal TIM barrel domain N16961_VC00445 PF03952 Enolase, N-terminal domain N16961_VC00446 PF12627 Probable RNA and SrmB- binding site of polymerase A N16961_VC00446 PF01966 HD domain N16961_VC00446 PF01743 Poly A polymerase head domain N16961_VC00447 PF01471 Putative peptidoglycan binding domain N16961_VC00447 PF13401 AAA domain N16961_VC00449 PF08239 Bacterial SH3 domain N16961_VC00450 PF01384 Phosphate transporter family N16961_VC00451 PF01865 Protein of unknown function DUF47 N16961_VC00452 PF01928 CYTH domain N16961_VC00454 PF02743 Cache domain N16961_VC00454 PF00672 HAMP domain N16961_VC00454 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00455 PF03710 Glutamate-ammonia ligase adenylyltransferase N16961_VC00455 PF08335 GlnD PII-uridylyltransferase N16961_VC00456 PF00294 pfkB family carbohydrate kinase N16961_VC00456 PF01467 Cytidylyltransferase-like N16961_VC00457 PF02321 Outer membrane efflux protein N16961_VC00458 PF00293 NUDIX domain N16961_VC00459 PF06853 Protein of unknown function (DUF1249) N16961_VC00460 PF00149 Calcineurin-like phosphoesterase N16961_VC00461 PF05728 Uncharacterised protein family (UPF0227) N16961_VC00462 PF00986 DNA gyrase B subunit, carboxyl terminus N16961_VC00462 PF00204 DNA gyrase B N16961_VC00462 PF01751 Toprim domain N16961_VC00462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00463 PF03989 DNA gyrase C-terminal domain, beta-propeller N16961_VC00463 PF00521 DNA gyrase/topoisomerase IV, subunit A N16961_VC00464 PF03884 DNA gyrase inhibitor YacG N16961_VC00465 PF07072 Cell division protein N16961_VC00466 PF01121 Dephospho-CoA kinase N16961_VC00467 PF06750 Bacterial Peptidase A24 N-terminal domain N16961_VC00467 PF01478 Type IV leader peptidase family N16961_VC00468 PF00482 Type II secretion system (T2SS), protein F N16961_VC00469 PF00437 Type II/IV secretion system protein N16961_VC00469 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N16961_VC00470 PF07963 Prokaryotic N-terminal methylation motif N16961_VC00470 PF00114 Pilin (bacterial filament) N16961_VC00471 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N16961_VC00471 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N16961_VC00472 PF01510 N-acetylmuramoyl-L-alanine amidase N16961_VC00473 PF00258 Flavodoxin N16961_VC00474 PF00589 Phage integrase family N16961_VC00474 PF02899 Phage integrase, N-terminal SAM-like domain N16961_VC00475 PF13098 Thioredoxin-like domain N16961_VC00475 PF10411 Disulfide bond isomerase protein N-terminus N16961_VC00476 PF01368 DHH family N16961_VC00476 PF02272 DHHA1 domain N16961_VC00476 PF17768 RecJ OB domain N16961_VC00477 PF02872 5'-nucleotidase, C-terminal domain N16961_VC00477 PF00149 Calcineurin-like phosphoesterase N16961_VC00478 PF00392 Bacterial regulatory proteins, gntR family N16961_VC00478 PF07729 FCD domain N16961_VC00479 PF17831 Pyruvate dehydrogenase E1 component middle domain N16961_VC00479 PF00456 Transketolase, thiamine diphosphate binding domain N16961_VC00480 PF00364 Biotin-requiring enzyme N16961_VC00480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N16961_VC00480 PF02817 e3 binding domain N16961_VC00481 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VC00481 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00485 PF01795 MraW methylase family N16961_VC00486 PF04999 Cell division protein FtsL N16961_VC00487 PF00905 Penicillin binding protein transpeptidase domain N16961_VC00487 PF03717 Penicillin-binding Protein dimerisation domain N16961_VC00488 PF08245 Mur ligase middle domain N16961_VC00488 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00488 PF01225 Mur ligase family, catalytic domain N16961_VC00489 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00489 PF01225 Mur ligase family, catalytic domain N16961_VC00489 PF08245 Mur ligase middle domain N16961_VC00490 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N16961_VC00490 PF00953 Glycosyl transferase family 4 N16961_VC00491 PF08245 Mur ligase middle domain N16961_VC00491 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00492 PF01098 Cell cycle protein N16961_VC00493 PF03033 Glycosyltransferase family 28 N-terminal domain N16961_VC00493 PF04101 Glycosyltransferase family 28 C-terminal domain N16961_VC00494 PF08245 Mur ligase middle domain N16961_VC00494 PF01225 Mur ligase family, catalytic domain N16961_VC00494 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00495 PF03799 Cell division protein FtsQ N16961_VC00495 PF08478 POTRA domain, FtsQ-type N16961_VC00496 PF02491 SHS2 domain inserted in FTSA N16961_VC00497 PF00091 Tubulin/FtsZ family, GTPase domain N16961_VC00497 PF12327 FtsZ family, C-terminal domain N16961_VC00498 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N16961_VC00500 PF07516 SecA Wing and Scaffold domain N16961_VC00500 PF01043 SecA preprotein cross-linking domain N16961_VC00500 PF07517 SecA DEAD-like domain N16961_VC00500 PF02810 SEC-C motif N16961_VC00501 PF00293 NUDIX domain N16961_VC00502 PF01113 Dihydrodipicolinate reductase, N-terminus N16961_VC00502 PF05173 Dihydrodipicolinate reductase, C-terminus N16961_VC00503 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N16961_VC00503 PF00117 Glutamine amidotransferase class-I N16961_VC00504 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N16961_VC00504 PF02142 MGS-like domain N16961_VC00504 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N16961_VC00508 PF00005 ABC transporter N16961_VC00509 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N16961_VC00512 PF01925 Sulfite exporter TauE/SafE N16961_VC00513 PF03466 LysR substrate binding domain N16961_VC00513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00514 PF03458 UPF0126 domain N16961_VC00515 PF01497 Periplasmic binding protein N16961_VC00517 PF01048 Phosphorylase superfamily N16961_VC00519 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N16961_VC00519 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00520 PF01493 GXGXG motif N16961_VC00520 PF01645 Conserved region in glutamate synthase N16961_VC00520 PF04898 Glutamate synthase central domain N16961_VC00520 PF00310 Glutamine amidotransferases class-II N16961_VC00521 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00521 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N16961_VC00522 PF01493 GXGXG motif N16961_VC00522 PF00310 Glutamine amidotransferases class-II N16961_VC00522 PF04898 Glutamate synthase central domain N16961_VC00522 PF01645 Conserved region in glutamate synthase N16961_VC00523 PF16199 Radical_SAM C-terminal domain N16961_VC00523 PF04055 Radical SAM superfamily N16961_VC00524 PF00563 EAL domain N16961_VC00524 PF01590 GAF domain N16961_VC00524 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00524 PF00360 Phytochrome region N16961_VC00525 PF00072 Response regulator receiver domain N16961_VC00525 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00525 PF00989 PAS fold N16961_VC00525 PF01627 Hpt domain N16961_VC00525 PF18415 Histidine kinase receptor ArcB trans-membrane domain N16961_VC00526 PF00072 Response regulator receiver domain N16961_VC00526 PF00486 Transcriptional regulatory protein, C terminal N16961_VC00528 PF03737 Aldolase/RraA N16961_VC00531 PF03447 Homoserine dehydrogenase, NAD binding domain N16961_VC00531 PF00696 Amino acid kinase family N16961_VC00531 PF01842 ACT domain N16961_VC00531 PF13840 ACT domain N16961_VC00531 PF00742 Homoserine dehydrogenase N16961_VC00532 PF00288 GHMP kinases N terminal domain N16961_VC00532 PF08544 GHMP kinases C terminal N16961_VC00533 PF14821 Threonine synthase N terminus N16961_VC00533 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC00534 PF01228 Glycine radical N16961_VC00535 PF01261 Xylose isomerase-like TIM barrel N16961_VC00536 PF03167 Uracil DNA glycosylase superfamily N16961_VC00539 PF01235 Sodium:alanine symporter family N16961_VC00540 PF03883 Peroxide stress protein YaaA N16961_VC00542 PF01026 TatD related DNase N16961_VC00543 PF07670 Nucleoside recognition N16961_VC00543 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_VC00543 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_VC00544 PF01791 DeoC/LacD family aldolase N16961_VC00545 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N16961_VC00545 PF00591 Glycosyl transferase family, a/b domain N16961_VC00545 PF02885 Glycosyl transferase family, helical bundle domain N16961_VC00546 PF01676 Metalloenzyme superfamily N16961_VC00547 PF01048 Phosphorylase superfamily N16961_VC00549 PF18429 Domain of unknown function (DUF5609) N16961_VC00551 PF18073 Rubredoxin metal binding domain N16961_VC00552 PF00679 Elongation factor G C-terminus N16961_VC00552 PF14492 Elongation Factor G, domain II N16961_VC00552 PF03764 Elongation factor G, domain IV N16961_VC00552 PF00009 Elongation factor Tu GTP binding domain N16961_VC00552 PF03144 Elongation factor Tu domain 2 N16961_VC00553 PF00501 AMP-binding enzyme N16961_VC00554 PF00072 Response regulator receiver domain N16961_VC00556 PF02929 Beta galactosidase small chain N16961_VC00556 PF02837 Glycosyl hydrolases family 2, sugar binding domain N16961_VC00556 PF02836 Glycosyl hydrolases family 2, TIM barrel domain N16961_VC00556 PF00703 Glycosyl hydrolases family 2 N16961_VC00556 PF16353 Domain of unknown function(DUF4981) N16961_VC00557 PF00356 Bacterial regulatory proteins, lacI family N16961_VC00558 PF01588 Putative tRNA binding domain N16961_VC00560 PF01544 CorA-like Mg2+ transporter protein N16961_VC00561 PF02080 TrkA-C domain N16961_VC00561 PF08443 RimK-like ATP-grasp domain N16961_VC00561 PF18030 RimK PreATP-grasp domain N16961_VC00563 PF00583 Acetyltransferase (GNAT) family N16961_VC00565 PF14602 Hexapeptide repeat of succinyl-transferase N16961_VC00565 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle N16961_VC00566 PF07130 YebG protein N16961_VC00569 PF17946 RecC C-terminal domain N16961_VC00570 PF13361 UvrD-like helicase C-terminal domain N16961_VC00570 PF00580 UvrD/REP helicase N-terminal domain N16961_VC00570 PF12705 PD-(D/E)XK nuclease superfamily N16961_VC00571 PF13538 UvrD-like helicase C-terminal domain N16961_VC00573 PF00696 Amino acid kinase family N16961_VC00573 PF00583 Acetyltransferase (GNAT) family N16961_VC00575 PF03562 MltA specific insert domain N16961_VC00575 PF06725 3D domain N16961_VC00576 PF00899 ThiF family N16961_VC00577 PF02657 Fe-S metabolism associated domain N16961_VC00578 PF00266 Aminotransferase class-V N16961_VC00579 PF01965 DJ-1/PfpI family N16961_VC00580 PF02558 Ketopantoate reductase PanE/ApbA N16961_VC00580 PF08546 Ketopantoate reductase PanE/ApbA C terminal N16961_VC00581 PF03502 Nucleoside-specific channel-forming protein, Tsx N16961_VC00583 PF04545 Sigma-70, region 4 N16961_VC00583 PF04542 Sigma-70 region 2 N16961_VC00585 PF07690 Major Facilitator Superfamily N16961_VC00586 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N16961_VC00588 PF05175 Methyltransferase small domain N16961_VC00589 PF01722 BolA-like protein N16961_VC00590 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) N16961_VC00590 PF11973 NQRA C-terminal domain N16961_VC00591 PF03116 NQR2, RnfD, RnfE family N16961_VC00592 PF04205 FMN-binding domain N16961_VC00593 PF02508 Rnf-Nqr subunit, membrane protein N16961_VC00594 PF02508 Rnf-Nqr subunit, membrane protein N16961_VC00595 PF00175 Oxidoreductase NAD-binding domain N16961_VC00595 PF00970 Oxidoreductase FAD-binding domain N16961_VC00595 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VC00596 PF02424 ApbE family N16961_VC00598 PF00817 impB/mucB/samB family N16961_VC00598 PF11798 IMS family HHH motif N16961_VC00600 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00600 PF17158 Membrane-associated sensor, integral membrane domain N16961_VC00601 PF00209 Sodium:neurotransmitter symporter family N16961_VC00603 PF08443 RimK-like ATP-grasp domain N16961_VC00603 PF18030 RimK PreATP-grasp domain N16961_VC00604 PF08443 RimK-like ATP-grasp domain N16961_VC00604 PF18030 RimK PreATP-grasp domain N16961_VC00605 PF07687 Peptidase dimerisation domain N16961_VC00605 PF01546 Peptidase family M20/M25/M40 N16961_VC00606 PF00860 Permease family N16961_VC00607 PF00156 Phosphoribosyl transferase domain N16961_VC00609 PF07417 Sigma factor-binding transcriptional regulator Crl N16961_VC00610 PF01472 PUA domain N16961_VC00610 PF00696 Amino acid kinase family N16961_VC00611 PF00171 Aldehyde dehydrogenase family N16961_VC00612 PF03477 ATP cone domain N16961_VC00613 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VC00613 PF01872 RibD C-terminal domain N16961_VC00614 PF00677 Lumazine binding domain N16961_VC00615 PF00925 GTP cyclohydrolase II N16961_VC00615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N16961_VC00616 PF00885 6,7-dimethyl-8-ribityllumazine synthase N16961_VC00617 PF01029 NusB family N16961_VC00618 PF02769 AIR synthase related protein, C-terminal domain N16961_VC00618 PF00586 AIR synthase related protein, N-terminal domain N16961_VC00619 PF04608 Phosphatidylglycerophosphatase A N16961_VC00620 PF11944 Protein of unknown function (DUF3461) N16961_VC00621 PF01909 Nucleotidyltransferase domain N16961_VC00621 PF01966 HD domain N16961_VC00621 PF08335 GlnD PII-uridylyltransferase N16961_VC00622 PF00557 Metallopeptidase family M24 N16961_VC00624 PF00318 Ribosomal protein S2 N16961_VC00625 PF00889 Elongation factor TS N16961_VC00626 PF00696 Amino acid kinase family N16961_VC00627 PF01765 Ribosome recycling factor N16961_VC00628 PF01255 Putative undecaprenyl diphosphate synthase N16961_VC00630 PF13288 DXP reductoisomerase C-terminal domain N16961_VC00630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N16961_VC00630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N16961_VC00631 PF02163 Peptidase family M50 N16961_VC00631 PF17820 PDZ domain N16961_VC00632 PF07244 Surface antigen variable number repeat N16961_VC00632 PF01103 Surface antigen N16961_VC00633 PF03938 Outer membrane protein (OmpH-like) N16961_VC00634 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N16961_VC00634 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC00635 PF07977 FabA-like domain N16961_VC00636 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N16961_VC00636 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC00637 PF02684 Lipid-A-disaccharide synthetase N16961_VC00638 PF01351 Ribonuclease HII N16961_VC00639 PF02811 PHP domain N16961_VC00639 PF14579 Helix-hairpin-helix motif N16961_VC00639 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N16961_VC00639 PF07733 Bacterial DNA polymerase III alpha NTPase domain N16961_VC00639 PF01336 OB-fold nucleic acid binding domain N16961_VC00640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N16961_VC00641 PF09179 TilS substrate binding domain N16961_VC00641 PF01171 PP-loop family N16961_VC00641 PF11734 TilS substrate C-terminal domain N16961_VC00642 PF00034 Cytochrome c N16961_VC00643 PF05870 Phenolic acid decarboxylase (PAD) N16961_VC00644 PF00543 Nitrogen regulatory protein P-II N16961_VC00645 PF03372 Endonuclease/Exonuclease/phosphatase family N16961_VC00646 PF01476 LysM domain N16961_VC00646 PF01464 Transglycosylase SLT domain N16961_VC00647 PF16123 Hydroxyacylglutathione hydrolase C-terminus N16961_VC00647 PF00753 Metallo-beta-lactamase superfamily N16961_VC00648 PF08241 Methyltransferase domain N16961_VC00649 PF00075 RNase H N16961_VC00650 PF00929 Exonuclease N16961_VC00652 PF02770 Acyl-CoA dehydrogenase, middle domain N16961_VC00652 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N16961_VC00652 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N16961_VC00652 PF09317 Domain of unknown function (DUF1974) N16961_VC00653 PF13580 SIS domain N16961_VC00654 PF13230 Glutamine amidotransferases class-II N16961_VC00655 PF00551 Formyl transferase N16961_VC00656 PF00586 AIR synthase related protein, N-terminal domain N16961_VC00656 PF02769 AIR synthase related protein, C-terminal domain N16961_VC00659 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00659 PF08448 PAS fold N16961_VC00660 PF01479 S4 domain N16961_VC00660 PF00849 RNA pseudouridylate synthase N16961_VC00661 PF01713 Smr domain N16961_VC00664 PF01963 TraB family N16961_VC00665 PF00728 Glycosyl hydrolase family 20, catalytic domain N16961_VC00665 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain N16961_VC00665 PF03173 Putative carbohydrate binding domain N16961_VC00665 PF02838 Glycosyl hydrolase family 20, domain 2 N16961_VC00667 PF00403 Heavy-metal-associated domain N16961_VC00668 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_VC00669 PF01389 OmpA-like transmembrane domain N16961_VC00669 PF00691 OmpA family N16961_VC00671 PF07715 TonB-dependent Receptor Plug Domain N16961_VC00672 PF04954 Siderophore-interacting protein N16961_VC00672 PF08021 Siderophore-interacting FAD-binding domain N16961_VC00673 PF00550 Phosphopantetheine attachment site N16961_VC00673 PF00501 AMP-binding enzyme N16961_VC00673 PF08242 Methyltransferase domain N16961_VC00673 PF00668 Condensation domain N16961_VC00680 PF01584 CheW-like domain N16961_VC00680 PF00072 Response regulator receiver domain N16961_VC00681 PF01739 CheR methyltransferase, SAM binding domain N16961_VC00681 PF03705 CheR methyltransferase, all-alpha domain N16961_VC00682 PF00460 Flagella basal body rod protein N16961_VC00683 PF00460 Flagella basal body rod protein N16961_VC00683 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00684 PF13861 FlgD Tudor-like domain N16961_VC00684 PF13860 FlgD Ig-like domain N16961_VC00684 PF03963 Flagellar hook capping protein - N-terminal region N16961_VC00685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00685 PF07559 Flagellar basal body protein FlaE N16961_VC00685 PF00460 Flagella basal body rod protein N16961_VC00686 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00686 PF00460 Flagella basal body rod protein N16961_VC00687 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00687 PF00460 Flagella basal body rod protein N16961_VC00688 PF02107 Flagellar L-ring protein N16961_VC00689 PF02119 Flagellar P-ring protein N16961_VC00690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase N16961_VC00690 PF10135 Rod binding protein N16961_VC00691 PF07196 Flagellin hook IN motif N16961_VC00691 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00693 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00693 PF07196 Flagellin hook IN motif N16961_VC00693 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00694 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00694 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00694 PF07196 Flagellin hook IN motif N16961_VC00711 PF06071 Protein of unknown function (DUF933) N16961_VC00711 PF01926 50S ribosome-binding GTPase N16961_VC00712 PF01195 Peptidyl-tRNA hydrolase N16961_VC00713 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N16961_VC00713 PF14572 Phosphoribosyl synthetase-associated domain N16961_VC00714 PF08544 GHMP kinases C terminal N16961_VC00714 PF00288 GHMP kinases N terminal domain N16961_VC00715 PF03550 Outer membrane lipoprotein LolB N16961_VC00716 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N16961_VC00716 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N16961_VC00716 PF01488 Shikimate / quinate 5-dehydrogenase N16961_VC00717 PF00472 RF-1 domain N16961_VC00717 PF03462 PCRF domain N16961_VC00718 PF13847 Methyltransferase domain N16961_VC00718 PF17827 PrmC N-terminal domain N16961_VC00719 PF04247 Invasion gene expression up-regulator, SirB N16961_VC00720 PF13369 Transglutaminase-like superfamily N16961_VC00721 PF00793 DAHP synthetase I family N16961_VC00722 PF02872 5'-nucleotidase, C-terminal domain N16961_VC00722 PF00149 Calcineurin-like phosphoesterase N16961_VC00723 PF04073 Aminoacyl-tRNA editing domain N16961_VC00724 PF00860 Permease family N16961_VC00727 PF03358 NADPH-dependent FMN reductase N16961_VC00728 PF03960 ArsC family N16961_VC00729 PF13181 Tetratricopeptide repeat N16961_VC00729 PF01435 Peptidase family M48 N16961_VC00731 PF01594 AI-2E family transporter N16961_VC00732 PF00672 HAMP domain N16961_VC00732 PF02743 Cache domain N16961_VC00732 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00733 PF00578 AhpC/TSA family N16961_VC00735 PF00701 Dihydrodipicolinate synthetase family N16961_VC00736 PF06804 NlpB/DapX lipoprotein N16961_VC00738 PF02557 D-alanyl-D-alanine carboxypeptidase N16961_VC00739 PF01546 Peptidase family M20/M25/M40 N16961_VC00739 PF07687 Peptidase dimerisation domain N16961_VC00740 PF03960 ArsC family N16961_VC00743 PF11143 Protein of unknown function (DUF2919) N16961_VC00744 PF04261 Dyp-type peroxidase family N16961_VC00745 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00745 PF07196 Flagellin hook IN motif N16961_VC00745 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00746 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00746 PF07196 Flagellin hook IN motif N16961_VC00746 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00747 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00747 PF07196 Flagellin hook IN motif N16961_VC00747 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00748 PF03646 FlaG protein N16961_VC00749 PF02465 Flagellar hook-associated protein 2 N-terminus N16961_VC00749 PF07195 Flagellar hook-associated protein 2 C-terminus N16961_VC00749 PF07196 Flagellin hook IN motif N16961_VC00751 PF02561 Flagellar protein FliS N16961_VC00752 PF02954 Bacterial regulatory protein, Fis family N16961_VC00752 PF00072 Response regulator receiver domain N16961_VC00752 PF00158 Sigma-54 interaction domain N16961_VC00753 PF08447 PAS fold N16961_VC00753 PF13426 PAS domain N16961_VC00753 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00753 PF00989 PAS fold N16961_VC00753 PF13493 Domain of unknown function (DUF4118) N16961_VC00754 PF02954 Bacterial regulatory protein, Fis family N16961_VC00754 PF00158 Sigma-54 interaction domain N16961_VC00754 PF00072 Response regulator receiver domain N16961_VC00755 PF02049 Flagellar hook-basal body complex protein FliE N16961_VC00756 PF08345 Flagellar M-ring protein C-terminal N16961_VC00756 PF01514 Secretory protein of YscJ/FliF family N16961_VC00757 PF14841 FliG middle domain N16961_VC00757 PF01706 FliG C-terminal domain N16961_VC00757 PF14842 FliG N-terminal domain N16961_VC00758 PF02108 Flagellar assembly protein FliH N16961_VC00759 PF18269 T3SS EscN ATPase C-terminal domain N16961_VC00759 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_VC00762 PF03748 Flagellar basal body-associated protein FliL N16961_VC00763 PF02154 Flagellar motor switch protein FliM N16961_VC00763 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N16961_VC00764 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N16961_VC00765 PF04347 Flagellar biosynthesis protein, FliO N16961_VC00766 PF00813 FliP family N16961_VC00767 PF01313 Bacterial export proteins, family 3 N16961_VC00768 PF01311 Bacterial export proteins, family 1 N16961_VC00769 PF01312 FlhB HrpN YscU SpaS Family N16961_VC00770 PF01713 Smr domain N16961_VC00771 PF05175 Methyltransferase small domain N16961_VC00772 PF01264 Chorismate synthase N16961_VC00773 PF03458 UPF0126 domain N16961_VC00774 PF04315 Elongation factor P hydroxylase N16961_VC00775 PF08891 YfcL protein N16961_VC00776 PF03358 NADPH-dependent FMN reductase N16961_VC00777 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N16961_VC00777 PF01266 FAD dependent oxidoreductase N16961_VC00778 PF02801 Beta-ketoacyl synthase, C-terminal domain N16961_VC00778 PF00109 Beta-ketoacyl synthase, N-terminal domain N16961_VC00779 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VC00779 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VC00779 PF11890 Domain of unknown function (DUF3410) N16961_VC00780 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_VC00780 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_VC00781 PF01475 Ferric uptake regulator family N16961_VC00783 PF03466 LysR substrate binding domain N16961_VC00783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00784 PF03788 LrgA family N16961_VC00785 PF04172 LrgB-like family N16961_VC00786 PF00258 Flavodoxin N16961_VC00788 PF12697 Alpha/beta hydrolase family N16961_VC00789 PF17206 SeqA protein N-terminal domain N16961_VC00789 PF03925 SeqA protein C-terminal domain N16961_VC00790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VC00790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VC00790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VC00790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VC00792 PF01784 NIF3 (NGG1p interacting factor 3) N16961_VC00793 PF00285 Citrate synthase, C-terminal domain N16961_VC00794 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N16961_VC00795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N16961_VC00796 PF02910 Fumarate reductase flavoprotein C-term N16961_VC00796 PF00890 FAD binding domain N16961_VC00797 PF13085 2Fe-2S iron-sulfur cluster binding domain N16961_VC00798 PF02779 Transketolase, pyrimidine binding domain N16961_VC00798 PF16870 2-oxoglutarate dehydrogenase C-terminal N16961_VC00798 PF00676 Dehydrogenase E1 component N16961_VC00798 PF16078 2-oxoglutarate dehydrogenase N-terminus N16961_VC00799 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N16961_VC00799 PF00364 Biotin-requiring enzyme N16961_VC00799 PF02817 e3 binding domain N16961_VC00800 PF08442 ATP-grasp domain N16961_VC00800 PF00549 CoA-ligase N16961_VC00801 PF02629 CoA binding domain N16961_VC00801 PF00549 CoA-ligase N16961_VC00802 PF00950 ABC 3 transport family N16961_VC00803 PF00005 ABC transporter N16961_VC00804 PF01297 Zinc-uptake complex component A periplasmic N16961_VC00805 PF12833 Helix-turn-helix domain N16961_VC00805 PF02311 AraC-like ligand binding domain N16961_VC00807 PF04023 FeoA domain N16961_VC00808 PF07664 Ferrous iron transport protein B C terminus N16961_VC00808 PF02421 Ferrous iron transport protein B N16961_VC00808 PF07670 Nucleoside recognition N16961_VC00811 PF05746 DALR anticodon binding domain N16961_VC00811 PF03485 Arginyl tRNA synthetase N terminal domain N16961_VC00811 PF00750 tRNA synthetases class I (R) N16961_VC00813 PF05193 Peptidase M16 inactive domain N16961_VC00813 PF00675 Insulinase (Peptidase family M16) N16961_VC00814 PF00300 Histidine phosphatase superfamily (branch 1) N16961_VC00815 PF00771 FHIPEP family N16961_VC00816 PF00448 SRP54-type protein, GTPase domain N16961_VC00817 PF10609 NUBPL iron-transfer P-loop NTPase N16961_VC00818 PF04539 Sigma-70 region 3 N16961_VC00818 PF04545 Sigma-70, region 4 N16961_VC00818 PF04542 Sigma-70 region 2 N16961_VC00819 PF00072 Response regulator receiver domain N16961_VC00820 PF04344 Chemotaxis phosphatase, CheZ N16961_VC00821 PF07194 P2 response regulator binding domain N16961_VC00821 PF01627 Hpt domain N16961_VC00821 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_VC00821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00821 PF01584 CheW-like domain N16961_VC00822 PF01339 CheB methylesterase N16961_VC00822 PF00072 Response regulator receiver domain N16961_VC00823 PF13614 AAA domain N16961_VC00825 PF01584 CheW-like domain N16961_VC00827 PF00005 ABC transporter N16961_VC00828 PF03379 CcmB protein N16961_VC00829 PF01578 Cytochrome C assembly protein N16961_VC00830 PF04995 Heme exporter protein D (CcmD) N16961_VC00831 PF03100 CcmE N16961_VC00832 PF01578 Cytochrome C assembly protein N16961_VC00832 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N16961_VC00833 PF08534 Redoxin N16961_VC00834 PF03918 Cytochrome C biogenesis protein N16961_VC00836 PF04333 MlaA lipoprotein N16961_VC00839 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N16961_VC00839 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N16961_VC00840 PF00462 Glutaredoxin N16961_VC00841 PF01751 Toprim domain N16961_VC00841 PF01131 DNA topoisomerase N16961_VC00842 PF00850 Histone deacetylase domain N16961_VC00845 PF11893 Domain of unknown function (DUF3413) N16961_VC00845 PF00884 Sulfatase N16961_VC00846 PF07208 Protein of unknown function (DUF1414) N16961_VC00847 PF04245 37-kD nucleoid-associated bacterial protein N16961_VC00849 PF03553 Na+/H+ antiporter family N16961_VC00850 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_VC00850 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_VC00851 PF01914 MarC family integral membrane protein N16961_VC00852 PF00465 Iron-containing alcohol dehydrogenase N16961_VC00852 PF00171 Aldehyde dehydrogenase family N16961_VC00854 PF00916 Sulfate permease family N16961_VC00854 PF01740 STAS domain N16961_VC00855 PF10150 Ribonuclease E/G family N16961_VC00855 PF12111 Polyribonucleotide phosphorylase C terminal N16961_VC00855 PF00575 S1 RNA binding domain N16961_VC00856 PF00849 RNA pseudouridylate synthase N16961_VC00856 PF01479 S4 domain N16961_VC00857 PF02545 Maf-like protein N16961_VC00858 PF02620 Large ribosomal RNA subunit accumulation protein YceD N16961_VC00859 PF01783 Ribosomal L32p protein family N16961_VC00860 PF02504 Fatty acid synthesis protein N16961_VC00861 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N16961_VC00861 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N16961_VC00862 PF00698 Acyl transferase domain N16961_VC00864 PF00550 Phosphopantetheine attachment site N16961_VC00865 PF00109 Beta-ketoacyl synthase, N-terminal domain N16961_VC00865 PF02801 Beta-ketoacyl synthase, C-terminal domain N16961_VC00866 PF01063 Amino-transferase class IV N16961_VC00867 PF02618 YceG-like family N16961_VC00868 PF02223 Thymidylate kinase N16961_VC00869 PF09115 DNA polymerase III, delta subunit, C terminal N16961_VC00870 PF01026 TatD related DNase N16961_VC00871 PF00367 phosphotransferase system, EIIB N16961_VC00871 PF02378 Phosphotransferase system, EIIC N16961_VC00873 PF00209 Sodium:neurotransmitter symporter family N16961_VC00876 PF01734 Patatin-like phospholipase N16961_VC00877 PF02887 Pyruvate kinase, alpha/beta domain N16961_VC00877 PF00224 Pyruvate kinase, barrel domain N16961_VC00878 PF00480 ROK family N16961_VC00879 PF00072 Response regulator receiver domain N16961_VC00879 PF01584 CheW-like domain N16961_VC00882 PF13847 Methyltransferase domain N16961_VC00884 PF01263 Aldose 1-epimerase N16961_VC00885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_VC00885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_VC00886 PF01641 SelR domain N16961_VC00888 PF07023 Protein of unknown function (DUF1315) N16961_VC00889 PF00710 Asparaginase, N-terminal N16961_VC00889 PF17763 Glutaminase/Asparaginase C-terminal domain N16961_VC00890 PF01343 Peptidase family S49 N16961_VC00891 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_VC00891 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00892 PF01842 ACT domain N16961_VC00892 PF00551 Formyl transferase N16961_VC00894 PF13307 Helicase C-terminal domain N16961_VC00894 PF04851 Type III restriction enzyme, res subunit N16961_VC00895 PF00814 Glycoprotease family N16961_VC00898 PF00561 alpha/beta hydrolase fold N16961_VC00899 PF00501 AMP-binding enzyme N16961_VC00899 PF13193 AMP-binding enzyme C-terminal domain N16961_VC00900 PF00570 HRDC domain N16961_VC00900 PF01612 3'-5' exonuclease N16961_VC00904 PF13286 Phosphohydrolase-associated domain N16961_VC00904 PF01966 HD domain N16961_VC00906 PF00155 Aminotransferase class I and II N16961_VC00907 PF00425 chorismate binding enzyme N16961_VC00908 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_VC00908 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VC00908 PF16582 Middle domain of thiamine pyrophosphate N16961_VC00909 PF12697 Alpha/beta hydrolase family N16961_VC00910 PF00378 Enoyl-CoA hydratase/isomerase N16961_VC00911 PF13378 Enolase C-terminal domain-like N16961_VC00912 PF13193 AMP-binding enzyme C-terminal domain N16961_VC00912 PF00501 AMP-binding enzyme N16961_VC00913 PF03594 Benzoate membrane transport protein N16961_VC00914 PF01381 Helix-turn-helix N16961_VC00914 PF07883 Cupin domain N16961_VC00915 PF12729 Four helix bundle sensory module for signal transduction N16961_VC00915 PF00672 HAMP domain N16961_VC00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00916 PF07690 Major Facilitator Superfamily N16961_VC00921 PF04170 NlpE N-terminal domain N16961_VC00922 PF03776 Septum formation topological specificity factor MinE N16961_VC00923 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N16961_VC00924 PF03775 Septum formation inhibitor MinC, C-terminal domain N16961_VC00924 PF05209 Septum formation inhibitor MinC, N-terminal domain N16961_VC00925 PF05166 YcgL domain N16961_VC00926 PF13406 Transglycosylase SLT domain N16961_VC00927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00927 PF03466 LysR substrate binding domain N16961_VC00928 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_VC00928 PF07670 Nucleoside recognition N16961_VC00928 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_VC00929 PF00704 Glycosyl hydrolases family 18 N16961_VC00930 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_VC00931 PF00384 Molybdopterin oxidoreductase N16961_VC00931 PF18364 Molybdopterin oxidoreductase N-terminal domain N16961_VC00931 PF01568 Molydopterin dinucleotide binding domain N16961_VC00933 PF03466 LysR substrate binding domain N16961_VC00933 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00935 PF01494 FAD binding domain N16961_VC00936 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N16961_VC00937 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N16961_VC00937 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N16961_VC00946 PF00563 EAL domain N16961_VC00946 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC00946 PF03707 Bacterial signalling protein N terminal repeat N16961_VC00946 PF13188 PAS domain N16961_VC00949 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N16961_VC00950 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_VC00951 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N16961_VC00952 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N16961_VC00953 PF00158 Sigma-54 interaction domain N16961_VC00953 PF00072 Response regulator receiver domain N16961_VC00953 PF02954 Bacterial regulatory protein, Fis family N16961_VC00954 PF02743 Cache domain N16961_VC00954 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00955 PF05697 Bacterial trigger factor protein (TF) N16961_VC00955 PF05698 Bacterial trigger factor protein (TF) C-terminus N16961_VC00955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC00956 PF00574 Clp protease N16961_VC00957 PF06689 ClpX C4-type zinc finger N16961_VC00957 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VC00957 PF07724 AAA domain (Cdc48 subfamily) N16961_VC00958 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC00958 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_VC00958 PF02190 ATP-dependent protease La (LON) substrate-binding domain N16961_VC00959 PF00216 Bacterial DNA-binding protein N16961_VC00961 PF13145 PPIC-type PPIASE domain N16961_VC00963 PF02224 Cytidylate kinase N16961_VC00964 PF00575 S1 RNA binding domain N16961_VC00965 PF00216 Bacterial DNA-binding protein N16961_VC00966 PF06305 Lipopolysaccharide assembly protein A domain N16961_VC00967 PF18073 Rubredoxin metal binding domain N16961_VC00968 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N16961_VC00969 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) N16961_VC00971 PF03466 LysR substrate binding domain N16961_VC00971 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00973 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N16961_VC00973 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N16961_VC00974 PF01037 Lrp/AsnC ligand binding domain N16961_VC00975 PF09397 Ftsk gamma domain N16961_VC00975 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N16961_VC00975 PF17854 FtsK alpha domain N16961_VC00975 PF01580 FtsK/SpoIIIE family N16961_VC00976 PF02600 Disulfide bond formation protein DsbB N16961_VC00977 PF06450 Bacterial Na+/H+ antiporter B (NhaB) N16961_VC00978 PF00392 Bacterial regulatory proteins, gntR family N16961_VC00978 PF07840 FadR C-terminal domain N16961_VC00980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00980 PF00672 HAMP domain N16961_VC00981 PF01230 HIT domain N16961_VC00984 PF13036 Peptidoglycan-synthase activator LpoB N16961_VC00984 PF08139 Prokaryotic membrane lipoprotein lipid attachment site N16961_VC00986 PF05728 Uncharacterised protein family (UPF0227) N16961_VC00987 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00989 PF07968 Leukocidin/Hemolysin toxin family N16961_VC00989 PF12563 Hemolytic toxin N terminal N16961_VC00989 PF16458 Beta-prism lectin N16961_VC00991 PF02559 CarD-like/TRCF domain N16961_VC00991 PF00271 Helicase conserved C-terminal domain N16961_VC00991 PF00270 DEAD/DEAH box helicase N16961_VC00991 PF17757 UvrB interaction domain N16961_VC00991 PF03461 TRCF domain N16961_VC00993 PF12704 MacB-like periplasmic core domain N16961_VC00993 PF02687 FtsX-like permease family N16961_VC00994 PF00005 ABC transporter N16961_VC00995 PF12704 MacB-like periplasmic core domain N16961_VC00995 PF02687 FtsX-like permease family N16961_VC00997 PF13567 Domain of unknown function (DUF4131) N16961_VC00997 PF00753 Metallo-beta-lactamase superfamily N16961_VC00997 PF03772 Competence protein N16961_VC00998 PF00005 ABC transporter N16961_VC00998 PF00664 ABC transporter transmembrane region N16961_VC00999 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N16961_VC01000 PF03966 Trm112p-like protein N16961_VC01001 PF02348 Cytidylyltransferase N16961_VC01002 PF04293 SpoVR like protein N16961_VC01003 PF04285 Protein of unknown function (DUF444) N16961_VC01004 PF06798 PrkA serine protein kinase C-terminal domain N16961_VC01004 PF08298 PrkA AAA domain N16961_VC01005 PF03887 YfbU domain N16961_VC01007 PF04055 Radical SAM superfamily N16961_VC01008 PF12729 Four helix bundle sensory module for signal transduction N16961_VC01008 PF00672 HAMP domain N16961_VC01008 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01010 PF02901 Pyruvate formate lyase-like N16961_VC01010 PF01228 Glycine radical N16961_VC01013 PF00005 ABC transporter N16961_VC01014 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01015 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01016 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01017 PF03372 Endonuclease/Exonuclease/phosphatase family N16961_VC01018 PF00672 HAMP domain N16961_VC01018 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01019 PF10689 Protein of unknown function (DUF2496) N16961_VC01020 PF07445 Primosomal replication protein priC N16961_VC01021 PF01925 Sulfite exporter TauE/SafE N16961_VC01022 PF13307 Helicase C-terminal domain N16961_VC01022 PF06733 DEAD_2 N16961_VC01023 PF13609 Gram-negative porin N16961_VC01024 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N16961_VC01025 PF02810 SEC-C motif N16961_VC01026 PF00563 EAL domain N16961_VC01026 PF08668 HDOD domain N16961_VC01027 PF00149 Calcineurin-like phosphoesterase N16961_VC01028 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N16961_VC01029 PF09190 DALR domain N16961_VC01029 PF01406 tRNA synthetases class I (C) catalytic domain N16961_VC01030 PF02075 Crossover junction endodeoxyribonuclease RuvC N16961_VC01031 PF07499 RuvA, C-terminal domain N16961_VC01031 PF01330 RuvA N terminal domain N16961_VC01032 PF05496 Holliday junction DNA helicase RuvB P-loop domain N16961_VC01032 PF17864 RuvB AAA lid domain N16961_VC01032 PF05491 RuvB C-terminal winged helix domain N16961_VC01034 PF01654 Cytochrome bd terminal oxidase subunit I N16961_VC01035 PF02322 Cytochrome bd terminal oxidase subunit II N16961_VC01036 PF08173 Membrane bound YbgT-like protein N16961_VC01037 PF03061 Thioesterase superfamily N16961_VC01038 PF01618 MotA/TolQ/ExbB proton channel family N16961_VC01039 PF02472 Biopolymer transport protein ExbD/TolR N16961_VC01041 PF04052 TolB amino-terminal domain N16961_VC01041 PF07676 WD40-like Beta Propeller Repeat N16961_VC01042 PF00691 OmpA family N16961_VC01044 PF02445 Quinolinate synthetase A protein N16961_VC01046 PF00072 Response regulator receiver domain N16961_VC01046 PF09308 LuxQ, periplasmic N16961_VC01046 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01046 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01047 PF06610 L-alanine exporter N16961_VC01048 PF01238 Phosphomannose isomerase type I N16961_VC01049 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VC01049 PF02378 Phosphotransferase system, EIIC N16961_VC01049 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VC01050 PF12833 Helix-turn-helix domain N16961_VC01052 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VC01056 PF00171 Aldehyde dehydrogenase family N16961_VC01057 PF02954 Bacterial regulatory protein, Fis family N16961_VC01057 PF00158 Sigma-54 interaction domain N16961_VC01057 PF01590 GAF domain N16961_VC01058 PF09905 DNA-binding protein VF530 N16961_VC01060 PF00875 DNA photolyase N16961_VC01060 PF03441 FAD binding domain of DNA photolyase N16961_VC01075 PF00005 ABC transporter N16961_VC01084 PF01527 Transposase N16961_VC01085 PF00665 Integrase core domain N16961_VC01088 PF04002 RadC-like JAB domain N16961_VC01090 PF13088 BNR repeat-like domain N16961_VC01090 PF09264 Vibrio cholerae sialidase, lectin insertion N16961_VC01091 PF01979 Amidohydrolase family N16961_VC01092 PF00480 ROK family N16961_VC01093 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase N16961_VC01094 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_VC01095 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N16961_VC01096 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N16961_VC01097 PF00701 Dihydrodipicolinate synthetase family N16961_VC01098 PF01380 SIS domain N16961_VC01098 PF01418 Helix-turn-helix domain, rpiR family N16961_VC01099 PF01344 Kelch motif N16961_VC01100 PF07646 Kelch motif N16961_VC01104 PF02384 N-6 DNA Methylase N16961_VC01108 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N16961_VC01108 PF18766 SWI2/SNF2 ATPase N16961_VC01108 PF11867 Domain of unknown function (DUF3387) N16961_VC01112 PF00176 SNF2 family N-terminal domain N16961_VC01112 PF00271 Helicase conserved C-terminal domain N16961_VC01112 PF12419 SNF2 Helicase protein N16961_VC01113 PF13356 Arm DNA-binding domain N16961_VC01113 PF00589 Phage integrase family N16961_VC01114 PF13356 Arm DNA-binding domain N16961_VC01114 PF00589 Phage integrase family N16961_VC01116 PF00873 AcrB/AcrD/AcrF family N16961_VC01117 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_VC01119 PF02470 MlaD protein N16961_VC01120 PF04403 Paraquat-inducible protein A N16961_VC01121 PF00924 Mechanosensitive ion channel N16961_VC01121 PF05552 Conserved TM helix N16961_VC01125 PF08362 YcdC-like protein, C-terminal region N16961_VC01125 PF00440 Bacterial regulatory proteins, tetR family N16961_VC01126 PF00171 Aldehyde dehydrogenase family N16961_VC01127 PF07383 Protein of unknown function (DUF1496) N16961_VC01130 PF00440 Bacterial regulatory proteins, tetR family N16961_VC01130 PF16295 Tetracyclin repressor-like, C-terminal domain N16961_VC01131 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N16961_VC01131 PF02770 Acyl-CoA dehydrogenase, middle domain N16961_VC01131 PF09317 Domain of unknown function (DUF1974) N16961_VC01131 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N16961_VC01132 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N16961_VC01132 PF12241 Trans-2-enoyl-CoA reductase catalytic region N16961_VC01132 PF07055 Enoyl reductase FAD binding domain N16961_VC01133 PF01176 Translation initiation factor 1A / IF-1 N16961_VC01134 PF04376 Arginine-tRNA-protein transferase, N terminus N16961_VC01134 PF04377 Arginine-tRNA-protein transferase, C terminus N16961_VC01135 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N16961_VC01136 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N16961_VC01137 PF10692 Protein of unknown function (DUF2498) N16961_VC01138 PF08272 Topoisomerase I zinc-ribbon-like N16961_VC01138 PF01751 Toprim domain N16961_VC01138 PF01396 Topoisomerase DNA binding C4 zinc finger N16961_VC01138 PF01131 DNA topoisomerase N16961_VC01139 PF00483 Nucleotidyl transferase N16961_VC01140 PF00534 Glycosyl transferases group 1 N16961_VC01140 PF08323 Starch synthase catalytic domain N16961_VC01144 PF04994 TfoX C-terminal domain N16961_VC01144 PF04993 TfoX N-terminal domain N16961_VC01146 PF00356 Bacterial regulatory proteins, lacI family N16961_VC01147 PF02613 Nitrate reductase delta subunit N16961_VC01148 PF00486 Transcriptional regulatory protein, C terminal N16961_VC01148 PF00072 Response regulator receiver domain N16961_VC01149 PF02698 DUF218 domain N16961_VC01151 PF17192 MukF middle domain N16961_VC01151 PF17193 MukF C-terminal domain N16961_VC01151 PF03882 MukF winged-helix domain N16961_VC01152 PF04288 MukE-like family N16961_VC01153 PF16330 MukB hinge domain N16961_VC01153 PF04310 MukB N-terminal N16961_VC01154 PF01037 Lrp/AsnC ligand binding domain N16961_VC01155 PF01810 LysE type translocator N16961_VC01156 PF04055 Radical SAM superfamily N16961_VC01156 PF11842 Domain of unknown function (DUF3362) N16961_VC01156 PF08497 Radical SAM N-terminal N16961_VC01157 PF00563 EAL domain N16961_VC01157 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01157 PF03707 Bacterial signalling protein N terminal repeat N16961_VC01158 PF00675 Insulinase (Peptidase family M16) N16961_VC01158 PF05193 Peptidase M16 inactive domain N16961_VC01161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01161 PF03466 LysR substrate binding domain N16961_VC01162 PF08267 Cobalamin-independent synthase, N-terminal domain N16961_VC01162 PF01717 Cobalamin-independent synthase, Catalytic domain N16961_VC01164 PF03795 YCII-related domain N16961_VC01165 PF03061 Thioesterase superfamily N16961_VC01166 PF04279 Intracellular septation protein A N16961_VC01168 PF02698 DUF218 domain N16961_VC01169 PF01370 NAD dependent epimerase/dehydratase family N16961_VC01171 PF01226 Formate/nitrite transporter N16961_VC01172 PF06796 Periplasmic nitrate reductase protein NapE N16961_VC01173 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_VC01174 PF01568 Molydopterin dinucleotide binding domain N16961_VC01174 PF00384 Molybdopterin oxidoreductase N16961_VC01174 PF18364 Molybdopterin oxidoreductase N-terminal domain N16961_VC01178 PF01368 DHH family N16961_VC01178 PF02833 DHHA2 domain N16961_VC01181 PF00005 ABC transporter N16961_VC01182 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC01182 PF00005 ABC transporter N16961_VC01183 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_VC01183 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01184 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC01186 PF00158 Sigma-54 interaction domain N16961_VC01186 PF02954 Bacterial regulatory protein, Fis family N16961_VC01187 PF04012 PspA/IM30 family N16961_VC01190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_VC01190 PF00529 HlyD membrane-fusion protein of T1SS N16961_VC01191 PF13533 Biotin-lipoyl like N16961_VC01192 PF00873 AcrB/AcrD/AcrF family N16961_VC01193 PF03352 Methyladenine glycosylase N16961_VC01194 PF01053 Cys/Met metabolism PLP-dependent enzyme N16961_VC01195 PF13396 Phospholipase_D-nuclease N-terminal N16961_VC01195 PF13091 PLD-like domain N16961_VC01196 PF00209 Sodium:neurotransmitter symporter family N16961_VC01197 PF00849 RNA pseudouridylate synthase N16961_VC01198 PF01066 CDP-alcohol phosphatidyltransferase N16961_VC01199 PF00005 ABC transporter N16961_VC01200 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01201 PF13416 Bacterial extracellular solute-binding protein N16961_VC01203 PF06945 Protein of unknown function (DUF1289) N16961_VC01206 PF00005 ABC transporter N16961_VC01207 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_VC01208 PF03222 Tryptophan/tyrosine permease family N16961_VC01211 PF00571 CBS domain N16961_VC01211 PF01769 Divalent cation transporter N16961_VC01211 PF03448 MgtE intracellular N domain N16961_VC01213 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01213 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01213 PF09308 LuxQ, periplasmic N16961_VC01213 PF00072 Response regulator receiver domain N16961_VC01214 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01214 PF03707 Bacterial signalling protein N terminal repeat N16961_VC01214 PF00563 EAL domain N16961_VC01216 PF01752 Collagenase N16961_VC01216 PF08453 Peptidase family M9 N-terminal N16961_VC01216 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VC01218 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC01218 PF12793 Sugar transport-related sRNA regulator N-term N16961_VC01222 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01222 PF00672 HAMP domain N16961_VC01222 PF12729 Four helix bundle sensory module for signal transduction N16961_VC01224 PF00360 Phytochrome region N16961_VC01224 PF00563 EAL domain N16961_VC01224 PF01590 GAF domain N16961_VC01224 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01225 PF01386 Ribosomal L25p family N16961_VC01227 PF00486 Transcriptional regulatory protein, C terminal N16961_VC01227 PF00072 Response regulator receiver domain N16961_VC01229 PF00271 Helicase conserved C-terminal domain N16961_VC01229 PF04851 Type III restriction enzyme, res subunit N16961_VC01230 PF01479 S4 domain N16961_VC01230 PF00849 RNA pseudouridylate synthase N16961_VC01231 PF07690 Major Facilitator Superfamily N16961_VC01233 PF11066 Protein of unknown function (DUF2867) N16961_VC01233 PF13460 NAD(P)H-binding N16961_VC01234 PF01554 MatE N16961_VC01235 PF00005 ABC transporter N16961_VC01238 PF06965 Na+/H+ antiporter 1 N16961_VC01239 PF00202 Aminotransferase class-III N16961_VC01240 PF03435 Saccharopine dehydrogenase NADP binding domain N16961_VC01240 PF16653 Saccharopine dehydrogenase C-terminal domain N16961_VC01242 PF00691 OmpA family N16961_VC01242 PF05736 OprF membrane domain N16961_VC01243 PF02321 Outer membrane efflux protein N16961_VC01247 PF03466 LysR substrate binding domain N16961_VC01247 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01249 PF01863 Protein of unknown function DUF45 N16961_VC01250 PF05971 RNA methyltransferase N16961_VC01253 PF04204 Homoserine O-succinyltransferase N16961_VC01257 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_VC01260 PF17203 Single cache domain 3 N16961_VC01260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N16961_VC01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01260 PF00989 PAS fold N16961_VC01261 PF12431 Transcriptional regulator N16961_VC01261 PF00072 Response regulator receiver domain N16961_VC01263 PF00072 Response regulator receiver domain N16961_VC01263 PF01584 CheW-like domain N16961_VC01266 PF00072 Response regulator receiver domain N16961_VC01266 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01270 PF07690 Major Facilitator Superfamily N16961_VC01271 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain N16961_VC01271 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain N16961_VC01272 PF10509 Galactokinase galactose-binding signature N16961_VC01272 PF08544 GHMP kinases C terminal N16961_VC01272 PF00288 GHMP kinases N terminal domain N16961_VC01273 PF01263 Aldose 1-epimerase N16961_VC01274 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01275 PF17154 Gammaproteobacterial periplasmic sensor domain N16961_VC01275 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01275 PF00672 HAMP domain N16961_VC01275 PF00563 EAL domain N16961_VC01277 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VC01277 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_VC01277 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_VC01278 PF03306 Alpha-acetolactate decarboxylase N16961_VC01279 PF03466 LysR substrate binding domain N16961_VC01279 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01281 PF06628 Catalase-related immune-responsive N16961_VC01281 PF00199 Catalase N16961_VC01283 PF00080 Copper/zinc superoxide dismutase (SODC) N16961_VC01284 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) N16961_VC01285 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N16961_VC01285 PF00361 Proton-conducting membrane transporter N16961_VC01286 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01286 PF03466 LysR substrate binding domain N16961_VC01287 PF13193 AMP-binding enzyme C-terminal domain N16961_VC01287 PF00501 AMP-binding enzyme N16961_VC01293 PF10415 Fumarase C C-terminus N16961_VC01293 PF00206 Lyase N16961_VC01295 PF01654 Cytochrome bd terminal oxidase subunit I N16961_VC01296 PF02322 Cytochrome bd terminal oxidase subunit II N16961_VC01297 PF00005 ABC transporter N16961_VC01297 PF02687 FtsX-like permease family N16961_VC01297 PF12704 MacB-like periplasmic core domain N16961_VC01298 PF02687 FtsX-like permease family N16961_VC01298 PF12704 MacB-like periplasmic core domain N16961_VC01298 PF00005 ABC transporter N16961_VC01299 PF12704 MacB-like periplasmic core domain N16961_VC01299 PF02687 FtsX-like permease family N16961_VC01299 PF00005 ABC transporter N16961_VC01301 PF00529 HlyD membrane-fusion protein of T1SS N16961_VC01303 PF03466 LysR substrate binding domain N16961_VC01303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01304 PF00141 Peroxidase N16961_VC01305 PF00232 Glycosyl hydrolase family 1 N16961_VC01306 PF00356 Bacterial regulatory proteins, lacI family N16961_VC01307 PF01042 Endoribonuclease L-PSP N16961_VC01308 PF04074 YhcH/YjgK/YiaL N16961_VC01309 PF03009 Glycerophosphoryl diester phosphodiesterase family N16961_VC01310 PF08220 DeoR-like helix-turn-helix domain N16961_VC01310 PF00455 DeoR C terminal sensor domain N16961_VC01311 PF00005 ABC transporter N16961_VC01311 PF17912 MalK OB fold domain N16961_VC01312 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01313 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01314 PF13416 Bacterial extracellular solute-binding protein N16961_VC01316 PF01618 MotA/TolQ/ExbB proton channel family N16961_VC01317 PF01618 MotA/TolQ/ExbB proton channel family N16961_VC01318 PF02472 Biopolymer transport protein ExbD/TolR N16961_VC01319 PF03544 Gram-negative bacterial TonB protein C-terminal N16961_VC01321 PF01068 ATP dependent DNA ligase domain N16961_VC01321 PF14743 DNA ligase OB-like domain N16961_VC01323 PF01554 MatE N16961_VC01327 PF00877 NlpC/P60 family N16961_VC01328 PF02743 Cache domain N16961_VC01328 PF00672 HAMP domain N16961_VC01328 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01331 PF00480 ROK family N16961_VC01335 PF00994 Probable molybdopterin binding domain N16961_VC01335 PF03454 MoeA C-terminal region (domain IV) N16961_VC01335 PF03453 MoeA N-terminal region (domain I and II) N16961_VC01336 PF12804 MobA-like NTP transferase domain N16961_VC01337 PF08402 TOBE domain N16961_VC01337 PF00005 ABC transporter N16961_VC01338 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01339 PF12849 PBP superfamily domain N16961_VC01340 PF00158 Sigma-54 interaction domain N16961_VC01340 PF00072 Response regulator receiver domain N16961_VC01340 PF02954 Bacterial regulatory protein, Fis family N16961_VC01341 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01341 PF00989 PAS fold N16961_VC01341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01342 PF00005 ABC transporter N16961_VC01342 PF12848 ABC transporter N16961_VC01343 PF02634 FdhD/NarQ family N16961_VC01347 PF02613 Nitrate reductase delta subunit N16961_VC01349 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N16961_VC01349 PF00384 Molybdopterin oxidoreductase N16961_VC01349 PF01568 Molydopterin dinucleotide binding domain N16961_VC01350 PF13247 4Fe-4S dicluster domain N16961_VC01353 PF02146 Sir2 family N16961_VC01354 PF04461 Protein of unknown function (DUF520) N16961_VC01355 PF00793 DAHP synthetase I family N16961_VC01358 PF17783 CvfB-like winged helix domain N16961_VC01358 PF13509 S1 domain N16961_VC01359 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF N16961_VC01359 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF N16961_VC01359 PF01189 16S rRNA methyltransferase RsmB/F N16961_VC01360 PF02470 MlaD protein N16961_VC01361 PF04403 Paraquat-inducible protein A N16961_VC01362 PF00005 ABC transporter N16961_VC01362 PF00664 ABC transporter transmembrane region N16961_VC01363 PF13185 GAF domain N16961_VC01364 PF17516 ProQ C-terminal domain N16961_VC01364 PF04352 ProQ/FINO family N16961_VC01365 PF11818 C-terminal domain of tail specific protease (DUF3340) N16961_VC01365 PF00595 PDZ domain N16961_VC01365 PF17804 Tail specific protease N-terminal domain N16961_VC01365 PF03572 Peptidase family S41 N16961_VC01367 PF01433 Peptidase family M1 domain N16961_VC01367 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N16961_VC01367 PF11940 Domain of unknown function (DUF3458) Ig-like fold N16961_VC01368 PF05088 Bacterial NAD-glutamate dehydrogenase N16961_VC01369 PF01180 Dihydroorotate dehydrogenase N16961_VC01370 PF07126 Cell-division protein ZapC N16961_VC01372 PF02926 THUMP domain N16961_VC01372 PF01170 Putative RNA methylase family UPF0020 N16961_VC01372 PF10672 S-adenosylmethionine-dependent methyltransferase N16961_VC01376 PF04957 Ribosome modulation factor N16961_VC01377 PF07977 FabA-like domain N16961_VC01378 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_VC01378 PF13654 AAA domain N16961_VC01379 PF17414 MatP C-terminal ribbon-helix-helix domain N16961_VC01379 PF06303 MatP N-terminal domain N16961_VC01382 PF00665 Integrase core domain N16961_VC01383 PF01527 Transposase N16961_VC01396 PF01381 Helix-turn-helix N16961_VC01401 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII N16961_VC01402 PF10734 Protein of unknown function (DUF2523) N16961_VC01403 PF05707 Zonular occludens toxin (Zot) N16961_VC01404 PF01375 Heat-labile enterotoxin alpha chain N16961_VC01405 PF01376 Heat-labile enterotoxin beta chain N16961_VC01406 PF01381 Helix-turn-helix N16961_VC01410 PF01381 Helix-turn-helix N16961_VC01414 PF16671 Actin cross-linking domain N16961_VC01414 PF12146 Serine aminopeptidase, S33 N16961_VC01414 PF11647 Membrane Localization Domain N16961_VC01414 PF11713 Peptidase C80 family N16961_VC01414 PF07634 RtxA repeat N16961_VC01415 PF02794 RTX toxin acyltransferase family N16961_VC01417 PF00005 ABC transporter N16961_VC01417 PF03412 Peptidase C39 family N16961_VC01417 PF00664 ABC transporter transmembrane region N16961_VC01419 PF03412 Peptidase C39 family N16961_VC01419 PF00664 ABC transporter transmembrane region N16961_VC01419 PF00005 ABC transporter N16961_VC01420 PF09308 LuxQ, periplasmic N16961_VC01420 PF00072 Response regulator receiver domain N16961_VC01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01420 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01423 PF00115 Cytochrome C and Quinol oxidase polypeptide I N16961_VC01426 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP N16961_VC01426 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N16961_VC01428 PF00403 Heavy-metal-associated domain N16961_VC01431 PF13545 Crp-like helix-turn-helix domain N16961_VC01431 PF00027 Cyclic nucleotide-binding domain N16961_VC01432 PF00582 Universal stress protein family N16961_VC01433 PF01171 PP-loop family N16961_VC01437 PF08402 TOBE domain N16961_VC01437 PF00005 ABC transporter N16961_VC01438 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01439 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01440 PF13416 Bacterial extracellular solute-binding protein N16961_VC01441 PF13416 Bacterial extracellular solute-binding protein N16961_VC01445 PF01235 Sodium:alanine symporter family N16961_VC01446 PF01810 LysE type translocator N16961_VC01451 PF04717 Type VI secretion system, phage-baseplate injector N16961_VC01451 PF16671 Actin cross-linking domain N16961_VC01452 PF05638 Type VI secretion system effector, Hcp N16961_VC01453 PF02074 Carboxypeptidase Taq (M32) metallopeptidase N16961_VC01454 PF00672 HAMP domain N16961_VC01454 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01454 PF02743 Cache domain N16961_VC01455 PF07690 Major Facilitator Superfamily N16961_VC01456 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_VC01456 PF00529 HlyD membrane-fusion protein of T1SS N16961_VC01457 PF02321 Outer membrane efflux protein N16961_VC01459 PF00270 DEAD/DEAH box helicase N16961_VC01459 PF00271 Helicase conserved C-terminal domain N16961_VC01460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01460 PF13426 PAS domain N16961_VC01460 PF08447 PAS fold N16961_VC01461 PF00672 HAMP domain N16961_VC01461 PF12729 Four helix bundle sensory module for signal transduction N16961_VC01461 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01462 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01462 PF00672 HAMP domain N16961_VC01462 PF17202 Single cache domain 3 N16961_VC01463 PF01584 CheW-like domain N16961_VC01464 PF01339 CheB methylesterase N16961_VC01464 PF00072 Response regulator receiver domain N16961_VC01466 PF01739 CheR methyltransferase, SAM binding domain N16961_VC01466 PF03705 CheR methyltransferase, all-alpha domain N16961_VC01467 PF00072 Response regulator receiver domain N16961_VC01467 PF01627 Hpt domain N16961_VC01467 PF01584 CheW-like domain N16961_VC01467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01468 PF01584 CheW-like domain N16961_VC01468 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_VC01468 PF07194 P2 response regulator binding domain N16961_VC01468 PF01627 Hpt domain N16961_VC01468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01471 PF00672 HAMP domain N16961_VC01471 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01472 PF00893 Small Multidrug Resistance protein N16961_VC01473 PF00875 DNA photolyase N16961_VC01473 PF03441 FAD binding domain of DNA photolyase N16961_VC01474 PF07690 Major Facilitator Superfamily N16961_VC01475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01475 PF03466 LysR substrate binding domain N16961_VC01476 PF03099 Biotin/lipoate A/B protein ligase family N16961_VC01476 PF10437 Bacterial lipoate protein ligase C-terminus N16961_VC01477 PF00012 Hsp70 protein N16961_VC01479 PF00271 Helicase conserved C-terminal domain N16961_VC01479 PF04408 Helicase associated domain (HA2) N16961_VC01479 PF11898 Domain of unknown function (DUF3418) N16961_VC01479 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N16961_VC01479 PF00270 DEAD/DEAH box helicase N16961_VC01484 PF03707 Bacterial signalling protein N terminal repeat N16961_VC01484 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01484 PF00563 EAL domain N16961_VC01486 PF00012 Hsp70 protein N16961_VC01487 PF00012 Hsp70 protein N16961_VC01488 PF17158 Membrane-associated sensor, integral membrane domain N16961_VC01488 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01490 PF03707 Bacterial signalling protein N terminal repeat N16961_VC01490 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01490 PF00563 EAL domain N16961_VC01494 PF06508 Queuosine biosynthesis protein QueC N16961_VC01495 PF04055 Radical SAM superfamily N16961_VC01498 PF10414 Sirohaem synthase dimerisation region N16961_VC01498 PF14824 Sirohaem biosynthesis protein central N16961_VC01498 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N16961_VC01499 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01500 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01501 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01502 PF00005 ABC transporter N16961_VC01503 PF01027 Inhibitor of apoptosis-promoting Bax1 N16961_VC01504 PF04358 DsrC like protein N16961_VC01505 PF00708 Acylphosphatase N16961_VC01506 PF10672 S-adenosylmethionine-dependent methyltransferase N16961_VC01506 PF17785 PUA-like domain N16961_VC01507 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01508 PF08534 Redoxin N16961_VC01508 PF00462 Glutaredoxin N16961_VC01509 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N16961_VC01509 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01509 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01509 PF00072 Response regulator receiver domain N16961_VC01509 PF01627 Hpt domain N16961_VC01509 PF00672 HAMP domain N16961_VC01510 PF00072 Response regulator receiver domain N16961_VC01511 PF14497 Glutathione S-transferase, C-terminal domain N16961_VC01511 PF02798 Glutathione S-transferase, N-terminal domain N16961_VC01513 PF04209 homogentisate 1,2-dioxygenase N16961_VC01514 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VC01515 PF07687 Peptidase dimerisation domain N16961_VC01515 PF01546 Peptidase family M20/M25/M40 N16961_VC01518 PF00501 AMP-binding enzyme N16961_VC01518 PF16177 Acetyl-coenzyme A synthetase N-terminus N16961_VC01518 PF13193 AMP-binding enzyme C-terminal domain N16961_VC01519 PF04303 PrpF protein N16961_VC01520 PF00330 Aconitase family (aconitate hydratase) N16961_VC01520 PF00694 Aconitase C-terminal domain N16961_VC01521 PF00285 Citrate synthase, C-terminal domain N16961_VC01523 PF00392 Bacterial regulatory proteins, gntR family N16961_VC01523 PF07729 FCD domain N16961_VC01526 PF01970 Tripartite tricarboxylate transporter TctA family N16961_VC01530 PF02653 Branched-chain amino acid transport system / permease component N16961_VC01531 PF00005 ABC transporter N16961_VC01532 PF13407 Periplasmic binding protein domain N16961_VC01536 PF00072 Response regulator receiver domain N16961_VC01536 PF00486 Transcriptional regulatory protein, C terminal N16961_VC01537 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01537 PF00672 HAMP domain N16961_VC01537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01538 PF06629 MltA-interacting protein MipA N16961_VC01539 PF04393 Protein of unknown function (DUF535) N16961_VC01540 PF00158 Sigma-54 interaction domain N16961_VC01540 PF00072 Response regulator receiver domain N16961_VC01540 PF02954 Bacterial regulatory protein, Fis family N16961_VC01541 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01541 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01541 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01542 PF00939 Sodium:sulfate symporter transmembrane region N16961_VC01543 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01543 PF00672 HAMP domain N16961_VC01544 PF00842 Alanine racemase, C-terminal domain N16961_VC01544 PF01168 Alanine racemase, N-terminal domain N16961_VC01545 PF00892 EamA-like transporter family N16961_VC01547 PF13302 Acetyltransferase (GNAT) domain N16961_VC01548 PF00158 Sigma-54 interaction domain N16961_VC01548 PF18024 Helix-turn-helix domain N16961_VC01549 PF05128 Domain of unknown function (DUF697) N16961_VC01550 PF04317 YcjX-like family, DUF463 N16961_VC01553 PF04715 Anthranilate synthase component I, N terminal region N16961_VC01553 PF00425 chorismate binding enzyme N16961_VC01554 PF00293 NUDIX domain N16961_VC01555 PF03222 Tryptophan/tyrosine permease family N16961_VC01556 PF03313 Serine dehydratase alpha chain N16961_VC01556 PF03315 Serine dehydratase beta chain N16961_VC01557 PF01242 6-pyruvoyl tetrahydropterin synthase N16961_VC01558 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01558 PF00672 HAMP domain N16961_VC01559 PF00152 tRNA synthetases class II (D, K and N) N16961_VC01559 PF01336 OB-fold nucleic acid binding domain N16961_VC01560 PF08543 Phosphomethylpyrimidine kinase N16961_VC01561 PF01966 HD domain N16961_VC01561 PF00672 HAMP domain N16961_VC01562 PF00155 Aminotransferase class I and II N16961_VC01566 PF17200 Single Cache domain 2 N16961_VC01566 PF00672 HAMP domain N16961_VC01566 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01567 PF04349 Periplasmic glucan biosynthesis protein, MdoG N16961_VC01568 PF13506 Glycosyl transferase family 21 N16961_VC01569 PF00356 Bacterial regulatory proteins, lacI family N16961_VC01570 PF04794 YdjC-like protein N16961_VC01571 PF02056 Family 4 glycosyl hydrolase N16961_VC01571 PF11975 Family 4 glycosyl hydrolase C-terminal domain N16961_VC01572 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N16961_VC01573 PF02378 Phosphotransferase system, EIIC N16961_VC01574 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VC01575 PF01522 Polysaccharide deacetylase N16961_VC01576 PF02028 BCCT, betaine/carnitine/choline family transporter N16961_VC01577 PF01047 MarR family N16961_VC01578 PF00196 Bacterial regulatory proteins, luxR family N16961_VC01578 PF00072 Response regulator receiver domain N16961_VC01579 PF07730 Histidine kinase N16961_VC01579 PF17200 Single Cache domain 2 N16961_VC01580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N16961_VC01582 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_VC01585 PF00753 Metallo-beta-lactamase superfamily N16961_VC01586 PF05951 Bacterial protein of unknown function (DUF882) N16961_VC01587 PF01471 Putative peptidoglycan binding domain N16961_VC01587 PF03734 L,D-transpeptidase catalytic domain N16961_VC01592 PF00925 GTP cyclohydrolase II N16961_VC01594 PF07690 Major Facilitator Superfamily N16961_VC01597 PF03989 DNA gyrase C-terminal domain, beta-propeller N16961_VC01597 PF00521 DNA gyrase/topoisomerase IV, subunit A N16961_VC01599 PF00317 Ribonucleotide reductase, all-alpha domain N16961_VC01599 PF02867 Ribonucleotide reductase, barrel domain N16961_VC01599 PF03477 ATP cone domain N16961_VC01600 PF00268 Ribonucleotide reductase, small chain N16961_VC01601 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VC01601 PF00175 Oxidoreductase NAD-binding domain N16961_VC01601 PF00970 Oxidoreductase FAD-binding domain N16961_VC01603 PF00994 Probable molybdopterin binding domain N16961_VC01606 PF00672 HAMP domain N16961_VC01606 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01606 PF17200 Single Cache domain 2 N16961_VC01609 PF00005 ABC transporter N16961_VC01610 PF01032 FecCD transport family N16961_VC01611 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N16961_VC01613 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N16961_VC01614 PF02654 Cobalamin-5-phosphate synthase N16961_VC01615 PF02277 Phosphoribosyltransferase N16961_VC01616 PF01641 SelR domain N16961_VC01618 PF08411 Exonuclease C-terminal N16961_VC01618 PF00929 Exonuclease N16961_VC01619 PF03788 LrgA family N16961_VC01620 PF04172 LrgB-like family N16961_VC01621 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VC01621 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VC01623 PF02222 ATP-grasp domain N16961_VC01624 PF05724 Thiopurine S-methyltransferase (TPMT) N16961_VC01627 PF00216 Bacterial DNA-binding protein N16961_VC01628 PF03147 Ferredoxin-fold anticodon binding domain N16961_VC01628 PF01588 Putative tRNA binding domain N16961_VC01628 PF03484 tRNA synthetase B5 domain N16961_VC01628 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N16961_VC01628 PF03483 B3/4 domain N16961_VC01629 PF01409 tRNA synthetases class II core domain (F) N16961_VC01629 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N16961_VC01631 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01631 PF00072 Response regulator receiver domain N16961_VC01636 PF01066 CDP-alcohol phosphatidyltransferase N16961_VC01637 PF02151 UvrB/uvrC motif N16961_VC01637 PF01541 GIY-YIG catalytic domain N16961_VC01637 PF08459 UvrC Helix-hairpin-helix N-terminal N16961_VC01638 PF00072 Response regulator receiver domain N16961_VC01638 PF00196 Bacterial regulatory proteins, luxR family N16961_VC01639 PF03104 DNA polymerase family B, exonuclease domain N16961_VC01639 PF00136 DNA polymerase family B N16961_VC01640 PF13426 PAS domain N16961_VC01640 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01640 PF00563 EAL domain N16961_VC01642 PF09285 Elongation factor P, C-terminal N16961_VC01642 PF08207 Elongation factor P (EF-P) KOW-like domain N16961_VC01642 PF01132 Elongation factor P (EF-P) OB domain N16961_VC01643 PF04269 Protein of unknown function, DUF440 N16961_VC01645 PF00392 Bacterial regulatory proteins, gntR family N16961_VC01645 PF07702 UTRA domain N16961_VC01646 PF01979 Amidohydrolase family N16961_VC01647 PF00491 Arginase family N16961_VC01648 PF01175 Urocanase Rossmann-like domain N16961_VC01648 PF17391 Urocanase N-terminal domain N16961_VC01648 PF17392 Urocanase C-terminal domain N16961_VC01649 PF00221 Aromatic amino acid lyase N16961_VC01651 PF00089 Trypsin N16961_VC01652 PF04191 Phospholipid methyltransferase N16961_VC01653 PF02913 FAD linked oxidases, C-terminal domain N16961_VC01653 PF01565 FAD binding domain N16961_VC01653 PF13183 4Fe-4S dicluster domain N16961_VC01656 PF13488 Glycine zipper N16961_VC01656 PF00691 OmpA family N16961_VC01660 PF01259 SAICAR synthetase N16961_VC01662 PF00390 Malic enzyme, N-terminal domain N16961_VC01662 PF03949 Malic enzyme, NAD binding domain N16961_VC01664 PF02698 DUF218 domain N16961_VC01665 PF08448 PAS fold N16961_VC01665 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01666 PF00266 Aminotransferase class-V N16961_VC01668 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC01669 PF00664 ABC transporter transmembrane region N16961_VC01669 PF00005 ABC transporter N16961_VC01670 PF00664 ABC transporter transmembrane region N16961_VC01670 PF00005 ABC transporter N16961_VC01671 PF00849 RNA pseudouridylate synthase N16961_VC01671 PF01479 S4 domain N16961_VC01672 PF01300 Telomere recombination N16961_VC01673 PF02811 PHP domain N16961_VC01675 PF00425 chorismate binding enzyme N16961_VC01675 PF04715 Anthranilate synthase component I, N terminal region N16961_VC01676 PF00117 Glutamine amidotransferase class-I N16961_VC01677 PF00591 Glycosyl transferase family, a/b domain N16961_VC01677 PF02885 Glycosyl transferase family, helical bundle domain N16961_VC01678 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N16961_VC01678 PF00218 Indole-3-glycerol phosphate synthase N16961_VC01679 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC01680 PF00290 Tryptophan synthase alpha chain N16961_VC01681 PF00375 Sodium:dicarboxylate symporter family N16961_VC01682 PF00265 Thymidine kinase N16961_VC01683 PF00152 tRNA synthetases class II (D, K and N) N16961_VC01683 PF02938 GAD domain N16961_VC01683 PF01336 OB-fold nucleic acid binding domain N16961_VC01684 PF01904 Protein of unknown function DUF72 N16961_VC01685 PF13649 Methyltransferase domain N16961_VC01686 PF08003 Protein of unknown function (DUF1698) N16961_VC01687 PF08443 RimK-like ATP-grasp domain N16961_VC01687 PF18030 RimK PreATP-grasp domain N16961_VC01690 PF00266 Aminotransferase class-V N16961_VC01692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01692 PF00989 PAS fold N16961_VC01692 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01695 PF04993 TfoX N-terminal domain N16961_VC01695 PF04994 TfoX C-terminal domain N16961_VC01697 PF03956 Lysine exporter LysO N16961_VC01699 PF00282 Pyridoxal-dependent decarboxylase conserved domain N16961_VC01700 PF01418 Helix-turn-helix domain, rpiR family N16961_VC01700 PF01380 SIS domain N16961_VC01701 PF00465 Iron-containing alcohol dehydrogenase N16961_VC01701 PF00171 Aldehyde dehydrogenase family N16961_VC01702 PF00462 Glutaredoxin N16961_VC01703 PF02080 TrkA-C domain N16961_VC01703 PF06826 Predicted Permease Membrane Region N16961_VC01704 PF07724 AAA domain (Cdc48 subfamily) N16961_VC01704 PF02861 Clp amino terminal domain, pathogenicity island component N16961_VC01704 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VC01704 PF17871 AAA lid domain N16961_VC01704 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC01705 PF02617 ATP-dependent Clp protease adaptor protein ClpS N16961_VC01706 PF00313 'Cold-shock' DNA-binding domain N16961_VC01707 PF03971 Monomeric isocitrate dehydrogenase N16961_VC01708 PF00849 RNA pseudouridylate synthase N16961_VC01709 PF01502 Phosphoribosyl-AMP cyclohydrolase N16961_VC01709 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N16961_VC01710 PF00977 Histidine biosynthesis protein N16961_VC01711 PF00977 Histidine biosynthesis protein N16961_VC01712 PF00117 Glutamine amidotransferase class-I N16961_VC01713 PF08645 Polynucleotide kinase 3 phosphatase N16961_VC01713 PF00475 Imidazoleglycerol-phosphate dehydratase N16961_VC01714 PF00155 Aminotransferase class I and II N16961_VC01715 PF00815 Histidinol dehydrogenase N16961_VC01716 PF01634 ATP phosphoribosyltransferase N16961_VC01716 PF08029 HisG, C-terminal domain N16961_VC01718 PF03553 Na+/H+ antiporter family N16961_VC01720 PF00816 H-NS histone family N16961_VC01721 PF00294 pfkB family carbohydrate kinase N16961_VC01723 PF04356 Protein of unknown function (DUF489) N16961_VC01724 PF08328 Adenylosuccinate lyase C-terminal N16961_VC01724 PF00206 Lyase N16961_VC01726 PF16036 Chalcone isomerase-like N16961_VC01731 PF00106 short chain dehydrogenase N16961_VC01733 PF01435 Peptidase family M48 N16961_VC01736 PF08241 Methyltransferase domain N16961_VC01737 PF00155 Aminotransferase class I and II N16961_VC01738 PF06968 Biotin and Thiamin Synthesis associated domain N16961_VC01738 PF04055 Radical SAM superfamily N16961_VC01739 PF00202 Aminotransferase class-III N16961_VC01740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_VC01740 PF02403 Seryl-tRNA synthetase N-terminal domain N16961_VC01741 PF12002 MgsA AAA+ ATPase C terminal N16961_VC01741 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC01741 PF16193 AAA C-terminal domain N16961_VC01742 PF03548 Outer membrane lipoprotein carrier protein LolA N16961_VC01743 PF07516 SecA Wing and Scaffold domain N16961_VC01743 PF01043 SecA preprotein cross-linking domain N16961_VC01743 PF07517 SecA DEAD-like domain N16961_VC01743 PF02810 SEC-C motif N16961_VC01744 PF01207 Dihydrouridine synthase (Dus) N16961_VC01745 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01746 PF00005 ABC transporter N16961_VC01747 PF02653 Branched-chain amino acid transport system / permease component N16961_VC01749 PF09905 DNA-binding protein VF530 N16961_VC01750 PF04217 Protein of unknown function, DUF412 N16961_VC01751 PF00871 Acetokinase family N16961_VC01752 PF01515 Phosphate acetyl/butaryl transferase N16961_VC01752 PF07085 DRTGG domain N16961_VC01753 PF13409 Glutathione S-transferase, N-terminal domain N16961_VC01754 PF00005 ABC transporter N16961_VC01754 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC01755 PF00005 ABC transporter N16961_VC01755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC01756 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01756 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_VC01757 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01758 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC01760 PF00072 Response regulator receiver domain N16961_VC01760 PF08448 PAS fold N16961_VC01760 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01760 PF13188 PAS domain N16961_VC01761 PF00072 Response regulator receiver domain N16961_VC01761 PF02954 Bacterial regulatory protein, Fis family N16961_VC01761 PF00158 Sigma-54 interaction domain N16961_VC01762 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01762 PF03707 Bacterial signalling protein N terminal repeat N16961_VC01762 PF00563 EAL domain N16961_VC01762 PF13188 PAS domain N16961_VC01763 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01763 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01764 PF13188 PAS domain N16961_VC01764 PF13426 PAS domain N16961_VC01764 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01764 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01764 PF00989 PAS fold N16961_VC01766 PF00072 Response regulator receiver domain N16961_VC01769 PF03481 Putative GTP-binding controlling metal-binding N16961_VC01769 PF01300 Telomere recombination N16961_VC01772 PF01161 Phosphatidylethanolamine-binding protein N16961_VC01774 PF06483 Chitinase C N16961_VC01774 PF00704 Glycosyl hydrolases family 18 N16961_VC01777 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_VC01777 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_VC01778 PF01022 Bacterial regulatory protein, arsR family N16961_VC01780 PF08448 PAS fold N16961_VC01780 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01782 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N16961_VC01785 PF01037 Lrp/AsnC ligand binding domain N16961_VC01785 PF13404 AsnC-type helix-turn-helix domain N16961_VC01786 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC01787 PF08496 Peptidase family S49 N-terminal N16961_VC01787 PF01343 Peptidase family S49 N16961_VC01788 PF00106 short chain dehydrogenase N16961_VC01789 PF03692 Putative zinc- or iron-chelating domain N16961_VC01790 PF03692 Putative zinc- or iron-chelating domain N16961_VC01791 PF13662 Toprim domain N16961_VC01791 PF02132 RecR protein N16961_VC01792 PF02575 YbaB/EbfC DNA-binding family N16961_VC01793 PF12169 DNA polymerase III subunits gamma and tau domain III N16961_VC01793 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding N16961_VC01793 PF12170 DNA polymerase III tau subunit V interacting with alpha N16961_VC01794 PF00156 Phosphoribosyl transferase domain N16961_VC01795 PF04304 Protein of unknown function (DUF454) N16961_VC01797 PF00072 Response regulator receiver domain N16961_VC01798 PF03466 LysR substrate binding domain N16961_VC01798 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01799 PF00881 Nitroreductase family N16961_VC01800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N16961_VC01800 PF00378 Enoyl-CoA hydratase/isomerase N16961_VC01800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N16961_VC01801 PF02803 Thiolase, C-terminal domain N16961_VC01801 PF00108 Thiolase, N-terminal domain N16961_VC01802 PF04542 Sigma-70 region 2 N16961_VC01802 PF08281 Sigma-70, region 4 N16961_VC01804 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_VC01805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_VC01806 PF01451 Low molecular weight phosphotyrosine protein phosphatase N16961_VC01807 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP N16961_VC01807 PF12557 Cob(I)alamin adenosyltransferase N terminal N16961_VC01808 PF05170 AsmA family N16961_VC01809 PF00485 Phosphoribulokinase / Uridine kinase family N16961_VC01810 PF10609 NUBPL iron-transfer P-loop NTPase N16961_VC01811 PF09334 tRNA synthetases class I (M) N16961_VC01811 PF01588 Putative tRNA binding domain N16961_VC01813 PF01048 Phosphorylase superfamily N16961_VC01814 PF00403 Heavy-metal-associated domain N16961_VC01815 PF00571 CBS domain N16961_VC01815 PF07085 DRTGG domain N16961_VC01815 PF00392 Bacterial regulatory proteins, gntR family N16961_VC01815 PF03061 Thioesterase superfamily N16961_VC01816 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01816 PF07694 5TMR of 5TMR-LYT N16961_VC01817 PF02391 MoaE protein N16961_VC01818 PF02597 ThiS family N16961_VC01819 PF01967 MoaC family N16961_VC01820 PF00994 Probable molybdopterin binding domain N16961_VC01821 PF06463 Molybdenum Cofactor Synthesis C N16961_VC01821 PF04055 Radical SAM superfamily N16961_VC01823 PF01933 Uncharacterised protein family UPF0052 N16961_VC01824 PF01627 Hpt domain N16961_VC01825 PF00158 Sigma-54 interaction domain N16961_VC01825 PF02954 Bacterial regulatory protein, Fis family N16961_VC01825 PF00072 Response regulator receiver domain N16961_VC01827 PF04851 Type III restriction enzyme, res subunit N16961_VC01827 PF12344 Ultra-violet resistance protein B N16961_VC01827 PF02151 UvrB/uvrC motif N16961_VC01827 PF00271 Helicase conserved C-terminal domain N16961_VC01827 PF17757 UvrB interaction domain N16961_VC01829 PF02508 Rnf-Nqr subunit, membrane protein N16961_VC01830 PF04060 Putative Fe-S cluster N16961_VC01831 PF10531 SLBB domain N16961_VC01831 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N16961_VC01831 PF12838 4Fe-4S dicluster domain N16961_VC01831 PF13375 RnfC Barrel sandwich hybrid domain N16961_VC01832 PF03116 NQR2, RnfD, RnfE family N16961_VC01833 PF04205 FMN-binding domain N16961_VC01834 PF02508 Rnf-Nqr subunit, membrane protein N16961_VC01835 PF00633 Helix-hairpin-helix motif N16961_VC01835 PF00730 HhH-GPD superfamily base excision DNA repair protein N16961_VC01835 PF10576 Iron-sulfur binding domain of endonuclease III N16961_VC01836 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VC01837 PF10952 Protein of unknown function (DUF2753) N16961_VC01838 PF18393 MotY N-terminal domain N16961_VC01838 PF00691 OmpA family N16961_VC01839 PF00929 Exonuclease N16961_VC01840 PF13726 Na+-H+ antiporter family N16961_VC01840 PF03553 Na+/H+ antiporter family N16961_VC01841 PF00156 Phosphoribosyl transferase domain N16961_VC01842 PF02674 Colicin V production protein N16961_VC01843 PF05036 Sporulation related domain N16961_VC01844 PF08245 Mur ligase middle domain N16961_VC01844 PF02875 Mur ligase family, glutamate ligase domain N16961_VC01845 PF17848 Acetyl-coA carboxylase zinc finger domain N16961_VC01845 PF01039 Carboxyl transferase domain N16961_VC01846 PF01416 tRNA pseudouridine synthase N16961_VC01848 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_VC01848 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N16961_VC01849 PF02378 Phosphotransferase system, EIIC N16961_VC01849 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N16961_VC01849 PF00367 phosphotransferase system, EIIB N16961_VC01850 PF01979 Amidohydrolase family N16961_VC01851 PF00480 ROK family N16961_VC01851 PF01047 MarR family N16961_VC01852 PF00999 Sodium/hydrogen exchanger family N16961_VC01852 PF02254 TrkA-N domain N16961_VC01853 PF00733 Asparagine synthase N16961_VC01853 PF13537 Glutamine amidotransferase domain N16961_VC01854 PF02357 Transcription termination factor nusG N16961_VC01855 PF00854 POT family N16961_VC01856 PF00762 Ferrochelatase N16961_VC01857 PF05191 Adenylate kinase, active site lid N16961_VC01858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01858 PF00183 Hsp90 protein N16961_VC01859 PF00486 Transcriptional regulatory protein, C terminal N16961_VC01860 PF17323 Trans-membrane regulatory protein ToxS N16961_VC01862 PF12850 Calcineurin-like phosphoesterase superfamily domain N16961_VC01863 PF08338 Domain of unknown function (DUF1731) N16961_VC01863 PF01370 NAD dependent epimerase/dehydratase family N16961_VC01864 PF00106 short chain dehydrogenase N16961_VC01865 PF00085 Thioredoxin N16961_VC01866 PF01145 SPFH domain / Band 7 family N16961_VC01866 PF16200 C-terminal region of band_7 N16961_VC01867 PF01957 NfeD-like C-terminal, partner-binding N16961_VC01868 PF13411 MerR HTH family regulatory protein N16961_VC01870 PF13609 Gram-negative porin N16961_VC01871 PF12826 Helix-hairpin-helix motif N16961_VC01871 PF00533 BRCA1 C Terminus (BRCT) domain N16961_VC01871 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N16961_VC01871 PF03120 NAD-dependent DNA ligase OB-fold domain N16961_VC01871 PF01653 NAD-dependent DNA ligase adenylation domain N16961_VC01872 PF04354 ZipA, C-terminal FtsZ-binding domain N16961_VC01874 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC01875 PF00381 PTS HPr component phosphorylation site N16961_VC01876 PF05524 PEP-utilising enzyme, N-terminal N16961_VC01876 PF00391 PEP-utilising enzyme, mobile domain N16961_VC01876 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_VC01877 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N16961_VC01878 PF01494 FAD binding domain N16961_VC01879 PF01938 TRAM domain N16961_VC01879 PF04055 Radical SAM superfamily N16961_VC01879 PF00919 Uncharacterized protein family UPF0004 N16961_VC01880 PF02562 PhoH-like protein N16961_VC01881 PF02130 Uncharacterized protein family UPF0054 N16961_VC01882 PF00571 CBS domain N16961_VC01882 PF03471 Transporter associated domain N16961_VC01883 PF00795 Carbon-nitrogen hydrolase N16961_VC01884 PF07295 Zinc-ribbon containing domain N16961_VC01885 PF08264 Anticodon-binding domain of tRNA N16961_VC01885 PF00133 tRNA synthetases class I (I, L, M and V) N16961_VC01885 PF13603 Leucyl-tRNA synthetase, Domain 2 N16961_VC01886 PF04390 Lipopolysaccharide-assembly N16961_VC01887 PF14840 Processivity clamp loader gamma complex DNA pol III C-term N16961_VC01887 PF06144 DNA polymerase III, delta subunit N16961_VC01889 PF02590 Predicted SPOUT methyltransferase N16961_VC01890 PF00905 Penicillin binding protein transpeptidase domain N16961_VC01890 PF03717 Penicillin-binding Protein dimerisation domain N16961_VC01891 PF01098 Cell cycle protein N16961_VC01892 PF03330 Lytic transglycolase N16961_VC01892 PF05036 Sporulation related domain N16961_VC01893 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_VC01893 PF07943 Penicillin-binding protein 5, C-terminal domain N16961_VC01894 PF04359 Protein of unknown function (DUF493) N16961_VC01895 PF03099 Biotin/lipoate A/B protein ligase family N16961_VC01896 PF04055 Radical SAM superfamily N16961_VC01896 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family N16961_VC01898 PF00464 Serine hydroxymethyltransferase N16961_VC01902 PF13614 AAA domain N16961_VC01902 PF13807 G-rich domain on putative tyrosine kinase N16961_VC01902 PF02706 Chain length determinant protein N16961_VC01903 PF02563 Polysaccharide biosynthesis/export protein N16961_VC01903 PF10531 SLBB domain N16961_VC01903 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N16961_VC01905 PF02397 Bacterial sugar transferase N16961_VC01908 PF12561 ToxR activated gene A lipoprotein domain N16961_VC01908 PF17945 Beta/Gamma crystallin N16961_VC01911 PF03808 Glycosyl transferase WecB/TagA/CpsF family N16961_VC01913 PF00534 Glycosyl transferases group 1 N16961_VC01913 PF00862 Sucrose synthase N16961_VC01915 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC01919 PF14602 Hexapeptide repeat of succinyl-transferase N16961_VC01919 PF12464 Maltose acetyltransferase N16961_VC01920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N16961_VC01920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N16961_VC01920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N16961_VC01921 PF02350 UDP-N-acetylglucosamine 2-epimerase N16961_VC01923 PF01451 Low molecular weight phosphotyrosine protein phosphatase N16961_VC01924 PF00873 AcrB/AcrD/AcrF family N16961_VC01925 PF13533 Biotin-lipoyl like N16961_VC01930 PF00128 Alpha amylase, catalytic domain N16961_VC01930 PF16657 Maltogenic Amylase, C-terminal domain N16961_VC01931 PF02378 Phosphotransferase system, EIIC N16961_VC01931 PF00367 phosphotransferase system, EIIB N16961_VC01932 PF00356 Bacterial regulatory proteins, lacI family N16961_VC01934 PF09383 NIL domain N16961_VC01934 PF00005 ABC transporter N16961_VC01935 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01936 PF03180 NLPA lipoprotein N16961_VC01937 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) N16961_VC01938 PF07348 Syd protein (SUKH-2) N16961_VC01939 PF14489 QueF-like protein N16961_VC01939 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N16961_VC01941 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC01942 PF03641 Possible lysine decarboxylase N16961_VC01942 PF11892 Domain of unknown function (DUF3412) N16961_VC01942 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases N16961_VC01943 PF01367 5'-3' exonuclease, C-terminal SAM fold N16961_VC01943 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N16961_VC01944 PF04241 Protein of unknown function (DUF423) N16961_VC01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01945 PF03466 LysR substrate binding domain N16961_VC01947 PF02568 Thiamine biosynthesis protein (ThiI) N16961_VC01947 PF02926 THUMP domain N16961_VC01948 PF13677 Membrane MotB of proton-channel complex MotA/MotB N16961_VC01948 PF00691 OmpA family N16961_VC01949 PF01618 MotA/TolQ/ExbB proton channel family N16961_VC01950 PF02609 Exonuclease VII small subunit N16961_VC01951 PF00348 Polyprenyl synthetase N16961_VC01952 PF02779 Transketolase, pyrimidine binding domain N16961_VC01952 PF02780 Transketolase, C-terminal domain N16961_VC01952 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N16961_VC01953 PF00849 RNA pseudouridylate synthase N16961_VC01954 PF04287 tRNA pseudouridine synthase C N16961_VC01957 PF13302 Acetyltransferase (GNAT) domain N16961_VC01960 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N16961_VC01961 PF03806 AbgT putative transporter family N16961_VC01962 PF00444 Ribosomal protein L36 N16961_VC01963 PF01197 Ribosomal protein L31 N16961_VC01964 PF01980 tRNA-methyltransferase O N16961_VC01964 PF18389 TrmO C-terminal domain N16961_VC01965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_VC01965 PF03129 Anticodon binding domain N16961_VC01965 PF04073 Aminoacyl-tRNA editing domain N16961_VC01967 PF06786 Uncharacterised protein family (UPF0253) N16961_VC01969 PF01797 Transposase IS200 like N16961_VC01970 PF02769 AIR synthase related protein, C-terminal domain N16961_VC01970 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N16961_VC01970 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N16961_VC01971 PF01464 Transglycosylase SLT domain N16961_VC01971 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01973 PF14437 MafB19-like deaminase N16961_VC01974 PF03806 AbgT putative transporter family N16961_VC01979 PF00114 Pilin (bacterial filament) N16961_VC01979 PF07963 Prokaryotic N-terminal methylation motif N16961_VC01980 PF00684 DnaJ central domain N16961_VC01980 PF01556 DnaJ C terminal domain N16961_VC01980 PF00226 DnaJ domain N16961_VC01981 PF00012 Hsp70 protein N16961_VC01982 PF01025 GrpE N16961_VC01983 PF01513 ATP-NAD kinase N16961_VC01984 PF02463 RecF/RecN/SMC N terminal domain N16961_VC01985 PF04355 SmpA / OmlA family N16961_VC01986 PF03658 RnfH family Ubiquitin N16961_VC01987 PF03364 Polyketide cyclase / dehydrase and lipid transport N16961_VC01988 PF01668 SmpB protein N16961_VC01991 PF13356 Arm DNA-binding domain N16961_VC01991 PF00589 Phage integrase family N16961_VC01993 PF13322 Domain of unknown function (DUF4092) N16961_VC01993 PF13402 Peptidase M60, enhancin and enhancin-like N16961_VC01993 PF17291 N-terminal domain of M60-like peptidases N16961_VC01995 PF04225 Opacity-associated protein A LysM-like domain N16961_VC01995 PF01551 Peptidase family M23 N16961_VC01999 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01999 PF00672 HAMP domain N16961_VC01999 PF02743 Cache domain N16961_VC02000 PF06750 Bacterial Peptidase A24 N-terminal domain N16961_VC02000 PF01478 Type IV leader peptidase family N16961_VC02001 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family N16961_VC02002 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F N16961_VC02003 PF00482 Type II secretion system (T2SS), protein F N16961_VC02004 PF00437 Type II/IV secretion system protein N16961_VC02005 PF17456 Toxin-coregulated pilus protein S N16961_VC02009 PF10671 Toxin co-regulated pilus biosynthesis protein Q N16961_VC02011 PF05946 Toxin-coregulated pilus subunit TcpA N16961_VC02011 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02013 PF00486 Transcriptional regulatory protein, C terminal N16961_VC02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02016 PF08534 Redoxin N16961_VC02020 PF12561 ToxR activated gene A lipoprotein domain N16961_VC02020 PF00041 Fibronectin type III domain N16961_VC02021 PF00171 Aldehyde dehydrogenase family N16961_VC02033 PF00037 4Fe-4S binding domain N16961_VC02033 PF11953 Domain of unknown function (DUF3470) N16961_VC02034 PF00588 SpoU rRNA Methylase family N16961_VC02034 PF08032 RNA 2'-O ribose methyltransferase substrate binding N16961_VC02036 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N16961_VC02037 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase N16961_VC02038 PF04223 Citrate lyase, alpha subunit (CitF) N16961_VC02039 PF03328 HpcH/HpaI aldolase/citrate lyase family N16961_VC02040 PF06857 Malonate decarboxylase delta subunit (MdcD) N16961_VC02041 PF08218 Citrate lyase ligase C-terminal domain N16961_VC02042 PF03390 2-hydroxycarboxylate transporter family N16961_VC02043 PF04277 Oxaloacetate decarboxylase, gamma chain N16961_VC02044 PF02436 Conserved carboxylase domain N16961_VC02044 PF00364 Biotin-requiring enzyme N16961_VC02044 PF00682 HMGL-like N16961_VC02045 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N16961_VC02046 PF17203 Single cache domain 3 N16961_VC02046 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02047 PF12431 Transcriptional regulator N16961_VC02047 PF00072 Response regulator receiver domain N16961_VC02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02050 PF03466 LysR substrate binding domain N16961_VC02051 PF01266 FAD dependent oxidoreductase N16961_VC02052 PF01235 Sodium:alanine symporter family N16961_VC02053 PF14864 Alkyl sulfatase C-terminal N16961_VC02053 PF14863 Alkyl sulfatase dimerisation N16961_VC02053 PF00753 Metallo-beta-lactamase superfamily N16961_VC02054 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02054 PF03466 LysR substrate binding domain N16961_VC02055 PF17837 4'-phosphopantetheinyl transferase N-terminal domain N16961_VC02055 PF01648 4'-phosphopantetheinyl transferase superfamily N16961_VC02056 PF00005 ABC transporter N16961_VC02057 PF01032 FecCD transport family N16961_VC02058 PF01032 FecCD transport family N16961_VC02059 PF01497 Periplasmic binding protein N16961_VC02062 PF00425 chorismate binding enzyme N16961_VC02063 PF13193 AMP-binding enzyme C-terminal domain N16961_VC02063 PF00501 AMP-binding enzyme N16961_VC02064 PF00550 Phosphopantetheine attachment site N16961_VC02064 PF00857 Isochorismatase family N16961_VC02065 PF01184 GPR1/FUN34/yaaH family N16961_VC02066 PF00704 Glycosyl hydrolases family 18 N16961_VC02066 PF06483 Chitinase C N16961_VC02067 PF00117 Glutamine amidotransferase class-I N16961_VC02067 PF00958 GMP synthase C terminal domain N16961_VC02067 PF02540 NAD synthase N16961_VC02068 PF00571 CBS domain N16961_VC02068 PF00478 IMP dehydrogenase / GMP reductase domain N16961_VC02069 PF02601 Exonuclease VII, large subunit N16961_VC02069 PF13742 OB-fold nucleic acid binding domain N16961_VC02072 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N16961_VC02072 PF01926 50S ribosome-binding GTPase N16961_VC02073 PF13360 PQQ-like domain N16961_VC02074 PF09976 Tetratricopeptide repeat-like domain N16961_VC02075 PF13393 Histidyl-tRNA synthetase N16961_VC02075 PF03129 Anticodon binding domain N16961_VC02076 PF04551 GcpE protein N16961_VC02077 PF13464 Domain of unknown function (DUF4115) N16961_VC02078 PF04055 Radical SAM superfamily N16961_VC02079 PF00334 Nucleoside diphosphate kinase N16961_VC02080 PF00883 Cytosol aminopeptidase family, catalytic domain N16961_VC02080 PF12404 Peptidase N16961_VC02081 PF04384 Iron-sulphur cluster assembly N16961_VC02082 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VC02083 PF00012 Hsp70 protein N16961_VC02084 PF07743 HSCB C-terminal oligomerisation domain N16961_VC02084 PF00226 DnaJ domain N16961_VC02085 PF01521 Iron-sulphur cluster biosynthesis N16961_VC02086 PF01592 NifU-like N terminal domain N16961_VC02087 PF00266 Aminotransferase class-V N16961_VC02088 PF02082 Transcriptional regulator N16961_VC02089 PF00588 SpoU rRNA Methylase family N16961_VC02090 PF00459 Inositol monophosphatase family N16961_VC02091 PF02355 Protein export membrane protein N16961_VC02091 PF07549 SecD/SecF GG Motif N16961_VC02092 PF13721 SecD export protein N-terminal TM region N16961_VC02092 PF07549 SecD/SecF GG Motif N16961_VC02092 PF02355 Protein export membrane protein N16961_VC02093 PF02699 Preprotein translocase subunit N16961_VC02094 PF01702 Queuine tRNA-ribosyltransferase N16961_VC02095 PF02547 Queuosine biosynthesis protein N16961_VC02096 PF00571 CBS domain N16961_VC02097 PF00463 Isocitrate lyase family N16961_VC02098 PF01274 Malate synthase N16961_VC02099 PF03466 LysR substrate binding domain N16961_VC02099 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02100 PF00578 AhpC/TSA family N16961_VC02100 PF10417 C-terminal domain of 1-Cys peroxiredoxin N16961_VC02101 PF03932 CutC family N16961_VC02102 PF03976 Polyphosphate kinase 2 (PPK2) N16961_VC02103 PF01895 PhoU domain N16961_VC02104 PF00005 ABC transporter N16961_VC02105 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02106 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02107 PF02503 Polyphosphate kinase middle domain N16961_VC02107 PF13090 Polyphosphate kinase C-terminal domain 2 N16961_VC02107 PF17941 Polyphosphate kinase C-terminal domain 1 N16961_VC02107 PF13089 Polyphosphate kinase N-terminal domain N16961_VC02108 PF02541 Ppx/GppA phosphatase family N16961_VC02109 PF12849 PBP superfamily domain N16961_VC02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02110 PF00989 PAS fold N16961_VC02110 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC02110 PF11808 Phosphate regulon sensor protein PhoR N16961_VC02111 PF00486 Transcriptional regulatory protein, C terminal N16961_VC02111 PF00072 Response regulator receiver domain N16961_VC02112 PF04381 Putative exonuclease, RdgC N16961_VC02114 PF00037 4Fe-4S binding domain N16961_VC02115 PF00881 Nitroreductase family N16961_VC02121 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VC02121 PF17871 AAA lid domain N16961_VC02121 PF07724 AAA domain (Cdc48 subfamily) N16961_VC02121 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC02121 PF02861 Clp amino terminal domain, pathogenicity island component N16961_VC02123 PF00849 RNA pseudouridylate synthase N16961_VC02123 PF01479 S4 domain N16961_VC02124 PF13525 Outer membrane lipoprotein N16961_VC02125 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N16961_VC02127 PF00800 Prephenate dehydratase N16961_VC02127 PF01817 Chorismate mutase type II N16961_VC02128 PF13416 Bacterial extracellular solute-binding protein N16961_VC02129 PF00563 EAL domain N16961_VC02129 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC02130 PF01931 Protein of unknown function DUF84 N16961_VC02131 PF01371 Trp repressor protein N16961_VC02132 PF14718 Soluble lytic murein transglycosylase L domain N16961_VC02132 PF01464 Transglycosylase SLT domain N16961_VC02133 PF00005 ABC transporter N16961_VC02133 PF12848 ABC transporter N16961_VC02134 PF07238 PilZ domain N16961_VC02135 PF01817 Chorismate mutase type II N16961_VC02135 PF02153 Prephenate dehydrogenase N16961_VC02136 PF00793 DAHP synthetase I family N16961_VC02137 PF06580 Histidine kinase N16961_VC02137 PF07694 5TMR of 5TMR-LYT N16961_VC02138 PF04397 LytTr DNA-binding domain N16961_VC02138 PF00072 Response regulator receiver domain N16961_VC02139 PF00933 Glycosyl hydrolase family 3 N terminal domain N16961_VC02140 PF03702 Anhydro-N-acetylmuramic acid kinase N16961_VC02141 PF13580 SIS domain N16961_VC02144 PF02554 Carbon starvation protein CstA N16961_VC02145 PF02401 LytB protein N16961_VC02146 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC02147 PF01252 Signal peptidase (SPase) II N16961_VC02148 PF08264 Anticodon-binding domain of tRNA N16961_VC02148 PF00133 tRNA synthetases class I (I, L, M and V) N16961_VC02148 PF06827 Zinc finger found in FPG and IleRS N16961_VC02149 PF06574 FAD synthetase N16961_VC02149 PF01687 Riboflavin kinase N16961_VC02150 PF03023 Lipid II flippase MurJ N16961_VC02151 PF01649 Ribosomal protein S20 N16961_VC02152 PF01022 Bacterial regulatory protein, arsR family N16961_VC02153 PF03466 LysR substrate binding domain N16961_VC02153 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02154 PF02690 Na+/Pi-cotransporter N16961_VC02155 PF00303 Thymidylate synthase N16961_VC02156 PF01790 Prolipoprotein diacylglyceryl transferase N16961_VC02157 PF01925 Sulfite exporter TauE/SafE N16961_VC02158 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_VC02158 PF00391 PEP-utilising enzyme, mobile domain N16961_VC02158 PF05524 PEP-utilising enzyme, N-terminal N16961_VC02158 PF01590 GAF domain N16961_VC02159 PF00293 NUDIX domain N16961_VC02160 PF02976 DNA mismatch repair enzyme MutH N16961_VC02161 PF00248 Aldo/keto reductase family N16961_VC02163 PF00072 Response regulator receiver domain N16961_VC02163 PF00158 Sigma-54 interaction domain N16961_VC02163 PF02954 Bacterial regulatory protein, Fis family N16961_VC02164 PF00152 tRNA synthetases class II (D, K and N) N16961_VC02164 PF01336 OB-fold nucleic acid binding domain N16961_VC02165 PF03462 PCRF domain N16961_VC02165 PF00472 RF-1 domain N16961_VC02166 PF05525 Branched-chain amino acid transport protein N16961_VC02167 PF05175 Methyltransferase small domain N16961_VC02168 PF00270 DEAD/DEAH box helicase N16961_VC02168 PF00271 Helicase conserved C-terminal domain N16961_VC02169 PF00009 Elongation factor Tu GTP binding domain N16961_VC02169 PF16658 Class II release factor RF3, C-terminal domain N16961_VC02169 PF03144 Elongation factor Tu domain 2 N16961_VC02170 PF00563 EAL domain N16961_VC02170 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC02170 PF03707 Bacterial signalling protein N terminal repeat N16961_VC02173 PF13508 Acetyltransferase (GNAT) domain N16961_VC02175 PF00563 EAL domain N16961_VC02175 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC02175 PF03707 Bacterial signalling protein N terminal repeat N16961_VC02180 PF13181 Tetratricopeptide repeat N16961_VC02180 PF07719 Tetratricopeptide repeat N16961_VC02181 PF03725 3' exoribonuclease family, domain 2 N16961_VC02181 PF01138 3' exoribonuclease family, domain 1 N16961_VC02181 PF00575 S1 RNA binding domain N16961_VC02181 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N16961_VC02181 PF00013 KH domain N16961_VC02182 PF00312 Ribosomal protein S15 N16961_VC02184 PF16198 tRNA pseudouridylate synthase B C-terminal domain N16961_VC02184 PF09157 Pseudouridine synthase II TruB, C-terminal N16961_VC02184 PF01509 TruB family pseudouridylate synthase (N terminal domain) N16961_VC02185 PF02033 Ribosome-binding factor A N16961_VC02186 PF04760 Translation initiation factor IF-2, N-terminal region N16961_VC02186 PF08364 Bacterial translation initiation factor IF-2 associated region N16961_VC02186 PF11987 Translation-initiation factor 2 N16961_VC02186 PF00009 Elongation factor Tu GTP binding domain N16961_VC02187 PF13184 NusA-like KH domain N16961_VC02187 PF08529 NusA N-terminal domain N16961_VC02187 PF00575 S1 RNA binding domain N16961_VC02188 PF17384 RimP C-terminal SH3 domain N16961_VC02188 PF02576 RimP N-terminal domain N16961_VC02192 PF03840 Preprotein translocase SecG subunit N16961_VC02194 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VC02194 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VC02194 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VC02194 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VC02195 PF00809 Pterin binding enzyme N16961_VC02196 PF17862 AAA+ lid domain N16961_VC02196 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC02196 PF01434 Peptidase family M41 N16961_VC02196 PF06480 FtsH Extracellular N16961_VC02197 PF01728 FtsJ-like methyltransferase N16961_VC02198 PF01985 CRS1 / YhbY (CRM) domain N16961_VC02199 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_VC02199 PF03449 Transcription elongation factor, N-terminal N16961_VC02200 PF13609 Gram-negative porin N16961_VC02201 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family N16961_VC02202 PF01479 S4 domain N16961_VC02202 PF00579 tRNA synthetases class I (W and Y) N16961_VC02203 PF04225 Opacity-associated protein A LysM-like domain N16961_VC02203 PF01551 Peptidase family M23 N16961_VC02204 PF00873 AcrB/AcrD/AcrF family N16961_VC02206 PF01521 Iron-sulphur cluster biosynthesis N16961_VC02207 PF00202 Aminotransferase class-III N16961_VC02209 PF01594 AI-2E family transporter N16961_VC02210 PF08468 Methyltransferase small domain N-terminal N16961_VC02210 PF05175 Methyltransferase small domain N16961_VC02211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02211 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC02211 PF00072 Response regulator receiver domain N16961_VC02211 PF09308 LuxQ, periplasmic N16961_VC02212 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC02213 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02214 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_VC02214 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02215 PF00005 ABC transporter N16961_VC02215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC02216 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC02216 PF00005 ABC transporter N16961_VC02218 PF01869 BadF/BadG/BcrA/BcrD ATPase family N16961_VC02219 PF00728 Glycosyl hydrolase family 20, catalytic domain N16961_VC02219 PF02838 Glycosyl hydrolase family 20, domain 2 N16961_VC02220 PF06165 Glycosyltransferase family 36 N16961_VC02220 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain N16961_VC02221 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VC02221 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VC02221 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VC02221 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VC02222 PF08402 TOBE domain N16961_VC02222 PF00005 ABC transporter N16961_VC02224 PF13416 Bacterial extracellular solute-binding protein N16961_VC02225 PF00909 Ammonium Transporter Family N16961_VC02226 PF00543 Nitrogen regulatory protein P-II N16961_VC02227 PF06062 Uncharacterised protein family (UPF0231) N16961_VC02228 PF11791 Aconitate B N-terminal domain N16961_VC02228 PF06434 Aconitate hydratase 2 N-terminus N16961_VC02228 PF00330 Aconitase family (aconitate hydratase) N16961_VC02229 PF01734 Patatin-like phospholipase N16961_VC02230 PF14814 Bifunctional transglycosylase second domain N16961_VC02230 PF00905 Penicillin binding protein transpeptidase domain N16961_VC02230 PF00912 Transglycosylase N16961_VC02231 PF08482 ATP-dependent helicase C-terminal N16961_VC02231 PF00271 Helicase conserved C-terminal domain N16961_VC02231 PF04408 Helicase associated domain (HA2) N16961_VC02231 PF00270 DEAD/DEAH box helicase N16961_VC02233 PF17746 SfsA N-terminal OB domain N16961_VC02233 PF03749 Sugar fermentation stimulation protein RE domain N16961_VC02234 PF01258 Prokaryotic dksA/traR C4-type zinc finger N16961_VC02235 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_VC02236 PF01743 Poly A polymerase head domain N16961_VC02236 PF12626 Polymerase A arginine-rich C-terminus N16961_VC02236 PF12627 Probable RNA and SrmB- binding site of polymerase A N16961_VC02237 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N16961_VC02238 PF02548 Ketopantoate hydroxymethyltransferase N16961_VC02239 PF02569 Pantoate-beta-alanine ligase N16961_VC02240 PF01061 ABC-2 type transporter N16961_VC02241 PF00005 ABC transporter N16961_VC02242 PF01740 STAS domain N16961_VC02242 PF00916 Sulfate permease family N16961_VC02243 PF00484 Carbonic anhydrase N16961_VC02244 PF00156 Phosphoribosyl transferase domain N16961_VC02245 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02246 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02247 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N16961_VC02248 PF04348 LppC putative lipoprotein N16961_VC02249 PF02021 Uncharacterised protein family UPF0102 N16961_VC02250 PF13580 SIS domain N16961_VC02251 PF04972 BON domain N16961_VC02252 PF04386 Stringent starvation protein B N16961_VC02253 PF00043 Glutathione S-transferase, C-terminal domain N16961_VC02253 PF02798 Glutathione S-transferase, N-terminal domain N16961_VC02254 PF02167 Cytochrome C1 family N16961_VC02255 PF00033 Cytochrome b/b6/petB N16961_VC02255 PF00032 Cytochrome b(C-terminal)/b6/petD N16961_VC02256 PF00355 Rieske [2Fe-2S] domain N16961_VC02256 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal N16961_VC02257 PF00380 Ribosomal protein S9/S16 N16961_VC02258 PF00572 Ribosomal protein L13 N16961_VC02259 PF03969 AFG1-like ATPase N16961_VC02261 PF00595 PDZ domain N16961_VC02262 PF13180 PDZ domain N16961_VC02263 PF01245 Ribosomal protein L19 N16961_VC02264 PF01746 tRNA (Guanine-1)-methyltransferase N16961_VC02265 PF01782 RimM N-terminal domain N16961_VC02265 PF05239 PRC-barrel domain N16961_VC02266 PF00886 Ribosomal protein S16 N16961_VC02267 PF00448 SRP54-type protein, GTPase domain N16961_VC02267 PF02881 SRP54-type protein, helical bundle domain N16961_VC02267 PF02978 Signal peptide binding domain N16961_VC02268 PF01578 Cytochrome C assembly protein N16961_VC02269 PF01595 Cyclin M transmembrane N-terminal domain N16961_VC02269 PF00571 CBS domain N16961_VC02269 PF03471 Transporter associated domain N16961_VC02270 PF02664 S-Ribosylhomocysteinase (LuxS) N16961_VC02271 PF04262 Glutamate-cysteine ligase N16961_VC02272 PF00675 Insulinase (Peptidase family M16) N16961_VC02272 PF05193 Peptidase M16 inactive domain N16961_VC02273 PF09335 SNARE associated Golgi protein N16961_VC02275 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N16961_VC02276 PF02436 Conserved carboxylase domain N16961_VC02276 PF00682 HMGL-like N16961_VC02276 PF00364 Biotin-requiring enzyme N16961_VC02277 PF04277 Oxaloacetate decarboxylase, gamma chain N16961_VC02286 PF02599 Global regulator protein family N16961_VC02287 PF13840 ACT domain N16961_VC02287 PF01842 ACT domain N16961_VC02287 PF00696 Amino acid kinase family N16961_VC02288 PF02272 DHHA1 domain N16961_VC02288 PF01411 tRNA synthetases class II (A) N16961_VC02288 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N16961_VC02289 PF02631 RecX family N16961_VC02290 PF00154 recA bacterial DNA recombination protein N16961_VC02291 PF02464 Competence-damaged protein N16961_VC02292 PF00005 ABC transporter N16961_VC02292 PF12857 TOBE-like domain N16961_VC02293 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02294 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02296 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC02297 PF00488 MutS domain V N16961_VC02297 PF05192 MutS domain III N16961_VC02297 PF05188 MutS domain II N16961_VC02297 PF05190 MutS family domain IV N16961_VC02297 PF01624 MutS domain I N16961_VC02298 PF04542 Sigma-70 region 2 N16961_VC02298 PF00140 Sigma-70 factor, region 1.2 N16961_VC02298 PF04539 Sigma-70 region 3 N16961_VC02298 PF04545 Sigma-70, region 4 N16961_VC02299 PF01476 LysM domain N16961_VC02299 PF01551 Peptidase family M23 N16961_VC02301 PF01975 Survival protein SurE N16961_VC02302 PF01142 tRNA pseudouridine synthase D (TruD) N16961_VC02303 PF02542 YgbB family N16961_VC02304 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N16961_VC02305 PF04977 Septum formation initiator N16961_VC02306 PF02673 Bacitracin resistance protein BacA N16961_VC02307 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N16961_VC02308 PF02152 Dihydroneopterin aldolase N16961_VC02309 PF02660 Glycerol-3-phosphate acyltransferase N16961_VC02310 PF00561 alpha/beta hydrolase fold N16961_VC02311 PF00814 Glycoprotease family N16961_VC02312 PF01165 Ribosomal protein S21 N16961_VC02313 PF09424 Yqey-like protein N16961_VC02314 PF10410 DnaB-helicase binding domain of primase N16961_VC02314 PF08278 DNA primase DnaG DnaB-binding N16961_VC02314 PF08275 DNA primase catalytic core, N-terminal domain N16961_VC02314 PF01807 CHC2 zinc finger N16961_VC02315 PF03979 Sigma-70 factor, region 1.1 N16961_VC02315 PF04539 Sigma-70 region 3 N16961_VC02315 PF04545 Sigma-70, region 4 N16961_VC02315 PF00140 Sigma-70 factor, region 1.2 N16961_VC02315 PF04546 Sigma-70, non-essential region N16961_VC02315 PF04542 Sigma-70 region 2 N16961_VC02317 PF00589 Phage integrase family N16961_VC02317 PF13356 Arm DNA-binding domain N16961_VC02318 PF00563 EAL domain N16961_VC02318 PF08668 HDOD domain N16961_VC02319 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02319 PF02743 Cache domain N16961_VC02319 PF00672 HAMP domain N16961_VC02320 PF12833 Helix-turn-helix domain N16961_VC02321 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02321 PF08447 PAS fold N16961_VC02323 PF04002 RadC-like JAB domain N16961_VC02329 PF01476 LysM domain N16961_VC02329 PF08525 Opacity-associated protein A N-terminal motif N16961_VC02329 PF01551 Peptidase family M23 N16961_VC02330 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02330 PF00114 Pilin (bacterial filament) N16961_VC02331 PF13737 Transposase DDE domain N16961_VC02332 PF01527 Transposase N16961_VC02333 PF00665 Integrase core domain N16961_VC02334 PF00075 RNase H N16961_VC02344 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_VC02345 PF01380 SIS domain N16961_VC02346 PF00455 DeoR C terminal sensor domain N16961_VC02346 PF08220 DeoR-like helix-turn-helix domain N16961_VC02347 PF02887 Pyruvate kinase, alpha/beta domain N16961_VC02347 PF00224 Pyruvate kinase, barrel domain N16961_VC02349 PF04402 Protein of unknown function (DUF541) N16961_VC02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02350 PF03466 LysR substrate binding domain N16961_VC02351 PF01810 LysE type translocator N16961_VC02352 PF00924 Mechanosensitive ion channel N16961_VC02352 PF05552 Conserved TM helix N16961_VC02353 PF01116 Fructose-bisphosphate aldolase class-II N16961_VC02354 PF00162 Phosphoglycerate kinase N16961_VC02355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_VC02355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_VC02356 PF00593 TonB dependent receptor N16961_VC02356 PF07715 TonB-dependent Receptor Plug Domain N16961_VC02357 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02357 PF03466 LysR substrate binding domain N16961_VC02358 PF02780 Transketolase, C-terminal domain N16961_VC02358 PF02779 Transketolase, pyrimidine binding domain N16961_VC02358 PF00456 Transketolase, thiamine diphosphate binding domain N16961_VC02359 PF02773 S-adenosylmethionine synthetase, C-terminal domain N16961_VC02359 PF02772 S-adenosylmethionine synthetase, central domain N16961_VC02359 PF00438 S-adenosylmethionine synthetase, N-terminal domain N16961_VC02360 PF17283 SprT-like zinc ribbon domain N16961_VC02360 PF10263 SprT-like family N16961_VC02361 PF04231 Endonuclease I N16961_VC02362 PF04452 RNA methyltransferase N16961_VC02363 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N16961_VC02363 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N16961_VC02364 PF02622 Uncharacterized ACR, COG1678 N16961_VC02365 PF03652 Holliday junction resolvase N16961_VC02366 PF00579 tRNA synthetases class I (W and Y) N16961_VC02366 PF01479 S4 domain N16961_VC02368 PF00437 Type II/IV secretion system protein N16961_VC02369 PF00437 Type II/IV secretion system protein N16961_VC02370 PF01168 Alanine racemase, N-terminal domain N16961_VC02371 PF03807 NADP oxidoreductase coenzyme F420-dependent N16961_VC02371 PF14748 Pyrroline-5-carboxylate reductase dimerisation N16961_VC02372 PF02325 YGGT family N16961_VC02373 PF02594 Uncharacterised ACR, YggU family COG1872 N16961_VC02375 PF01725 Ham1 family N16961_VC02376 PF06969 HemN C-terminal domain N16961_VC02376 PF04055 Radical SAM superfamily N16961_VC02377 PF04960 Glutaminase N16961_VC02378 PF02390 Putative methyltransferase N16961_VC02379 PF14815 NUDIX domain N16961_VC02379 PF00730 HhH-GPD superfamily base excision DNA repair protein N16961_VC02379 PF10576 Iron-sulfur binding domain of endonuclease III N16961_VC02379 PF00633 Helix-hairpin-helix motif N16961_VC02380 PF04362 Bacterial Fe(2+) trafficking N16961_VC02381 PF01464 Transglycosylase SLT domain N16961_VC02381 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain N16961_VC02386 PF00672 HAMP domain N16961_VC02386 PF12729 Four helix bundle sensory module for signal transduction N16961_VC02386 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02392 PF05099 Tellurite resistance protein TerB N16961_VC02392 PF00226 DnaJ domain N16961_VC02393 PF03968 OstA-like protein N16961_VC02393 PF04453 LPS transport system D N16961_VC02394 PF09312 SurA N-terminal domain N16961_VC02395 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N16961_VC02396 PF00398 Ribosomal RNA adenine dimethylase N16961_VC02397 PF04379 ApaG domain N16961_VC02398 PF00149 Calcineurin-like phosphoesterase N16961_VC02399 PF00186 Dihydrofolate reductase N16961_VC02400 PF12821 Threonine/Serine exporter, ThrE N16961_VC02401 PF06738 Putative threonine/serine exporter N16961_VC02402 PF01018 GTP1/OBG N16961_VC02402 PF01926 50S ribosome-binding GTPase N16961_VC02403 PF01016 Ribosomal L27 protein N16961_VC02404 PF00829 Ribosomal prokaryotic L21 protein N16961_VC02405 PF00348 Polyprenyl synthetase N16961_VC02406 PF13520 Amino acid permease N16961_VC02407 PF00056 lactate/malate dehydrogenase, NAD binding domain N16961_VC02407 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N16961_VC02408 PF02863 Arginine repressor, C-terminal domain N16961_VC02408 PF01316 Arginine repressor, DNA binding domain N16961_VC02409 PF16868 NMT1-like family N16961_VC02411 PF00582 Universal stress protein family N16961_VC02414 PF06877 Regulator of ribonuclease activity B N16961_VC02416 PF01523 Putative modulator of DNA gyrase N16961_VC02417 PF00795 Carbon-nitrogen hydrolase N16961_VC02418 PF13116 Protein of unknown function N16961_VC02418 PF13502 AsmA-like C-terminal region N16961_VC02419 PF10150 Ribonuclease E/G family N16961_VC02419 PF00575 S1 RNA binding domain N16961_VC02420 PF02545 Maf-like protein N16961_VC02421 PF04093 rod shape-determining protein MreD N16961_VC02422 PF04085 rod shape-determining protein MreC N16961_VC02429 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02429 PF00114 Pilin (bacterial filament) N16961_VC02432 PF00482 Type II secretion system (T2SS), protein F N16961_VC02433 PF00437 Type II/IV secretion system protein N16961_VC02435 PF13401 AAA domain N16961_VC02435 PF01471 Putative peptidoglycan binding domain N16961_VC02436 PF03958 Bacterial type II/III secretion system short domain N16961_VC02436 PF00263 Bacterial type II and III secretion system protein N16961_VC02436 PF11741 AMIN domain N16961_VC02436 PF07660 Secretin and TonB N terminus short domain N16961_VC02440 PF00990 Diguanylate cyclase, GGDEF domain N16961_VC02440 PF00563 EAL domain N16961_VC02440 PF17157 Gammaproteobacterial periplasmic sensor domain N16961_VC02441 PF00436 Single-strand binding protein family N16961_VC02442 PF00196 Bacterial regulatory proteins, luxR family N16961_VC02443 PF00483 Nucleotidyl transferase N16961_VC02444 PF17760 UvrA interaction domain N16961_VC02444 PF17755 UvrA DNA-binding domain N16961_VC02444 PF00005 ABC transporter N16961_VC02446 PF00266 Aminotransferase class-V N16961_VC02448 PF00696 Amino acid kinase family N16961_VC02448 PF01842 ACT domain N16961_VC02449 PF02574 Homocysteine S-methyltransferase N16961_VC02449 PF02607 B12 binding domain N16961_VC02449 PF02310 B12 binding domain N16961_VC02449 PF00809 Pterin binding enzyme N16961_VC02449 PF02965 Vitamin B12 dependent methionine synthase, activation domain N16961_VC02450 PF00999 Sodium/hydrogen exchanger family N16961_VC02465 PF01507 Phosphoadenosine phosphosulfate reductase family N16961_VC02466 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N16961_VC02466 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N16961_VC02467 PF00667 FAD binding domain N16961_VC02467 PF00258 Flavodoxin N16961_VC02467 PF00175 Oxidoreductase NAD-binding domain N16961_VC02470 PF09583 Phage shock protein G (Phageshock_PspG) N16961_VC02471 PF01207 Dihydrouridine synthase (Dus) N16961_VC02472 PF01475 Ferric uptake regulator family N16961_VC02474 PF12706 Beta-lactamase superfamily domain N16961_VC02475 PF00342 Phosphoglucose isomerase N16961_VC02476 PF01894 Uncharacterised protein family UPF0047 N16961_VC02477 PF00842 Alanine racemase, C-terminal domain N16961_VC02477 PF01168 Alanine racemase, N-terminal domain N16961_VC02478 PF00772 DnaB-like helicase N terminal domain N16961_VC02478 PF03796 DnaB-like helicase C terminal domain N16961_VC02480 PF01281 Ribosomal protein L9, N-terminal domain N16961_VC02480 PF03948 Ribosomal protein L9, C-terminal domain N16961_VC02481 PF01084 Ribosomal protein S18 N16961_VC02482 PF00436 Single-strand binding protein family N16961_VC02483 PF01250 Ribosomal protein S6 N16961_VC02484 PF00210 Ferritin-like domain N16961_VC02485 PF04324 BFD-like [2Fe-2S] binding domain N16961_VC02486 PF00009 Elongation factor Tu GTP binding domain N16961_VC02486 PF03143 Elongation factor Tu C-terminal domain N16961_VC02486 PF03144 Elongation factor Tu domain 2 N16961_VC02487 PF03764 Elongation factor G, domain IV N16961_VC02487 PF14492 Elongation Factor G, domain II N16961_VC02487 PF00009 Elongation factor Tu GTP binding domain N16961_VC02487 PF00679 Elongation factor G C-terminus N16961_VC02487 PF03144 Elongation factor Tu domain 2 N16961_VC02488 PF00177 Ribosomal protein S7p/S5e N16961_VC02489 PF00164 Ribosomal protein S12/S23 N16961_VC02491 PF02635 DsrE/DsrF-like family N16961_VC02492 PF02635 DsrE/DsrF-like family N16961_VC02493 PF13309 HTH domain N16961_VC02493 PF08348 YheO-like PAS domain N16961_VC02494 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC02494 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_VC02496 PF04102 SlyX N16961_VC02497 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) N16961_VC02498 PF01145 SPFH domain / Band 7 family N16961_VC02499 PF01145 SPFH domain / Band 7 family N16961_VC02499 PF12221 Bacterial membrane protein N terminal N16961_VC02500 PF16360 GTP-binding GTPase Middle Region N16961_VC02500 PF13167 GTP-binding GTPase N-terminal N16961_VC02500 PF01926 50S ribosome-binding GTPase N16961_VC02501 PF17209 Hfq protein N16961_VC02503 PF08676 MutL C terminal dimerisation domain N16961_VC02503 PF01119 DNA mismatch repair protein, C-terminal domain N16961_VC02504 PF01520 N-acetylmuramoyl-L-alanine amidase N16961_VC02505 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N16961_VC02506 PF08331 Domain of unknown function (DUF1730) N16961_VC02515 PF00929 Exonuclease N16961_VC02516 PF03193 RsgA GTPase N16961_VC02517 PF02666 Phosphatidylserine decarboxylase N16961_VC02518 PF00939 Sodium:sulfate symporter transmembrane region N16961_VC02520 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N16961_VC02520 PF01676 Metalloenzyme superfamily N16961_VC02521 PF01551 Peptidase family M23 N16961_VC02523 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02523 PF08360 QacR-like protein, C-terminal region N16961_VC02524 PF01208 Uroporphyrinogen decarboxylase (URO-D) N16961_VC02525 PF00293 NUDIX domain N16961_VC02525 PF09297 NADH pyrophosphatase zinc ribbon domain N16961_VC02526 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ N16961_VC02527 PF04983 RNA polymerase Rpb1, domain 3 N16961_VC02527 PF04997 RNA polymerase Rpb1, domain 1 N16961_VC02527 PF00623 RNA polymerase Rpb1, domain 2 N16961_VC02527 PF05000 RNA polymerase Rpb1, domain 4 N16961_VC02527 PF04998 RNA polymerase Rpb1, domain 5 N16961_VC02528 PF04565 RNA polymerase Rpb2, domain 3 N16961_VC02528 PF10385 RNA polymerase beta subunit external 1 domain N16961_VC02528 PF00562 RNA polymerase Rpb2, domain 6 N16961_VC02528 PF04561 RNA polymerase Rpb2, domain 2 N16961_VC02528 PF04560 RNA polymerase Rpb2, domain 7 N16961_VC02528 PF04563 RNA polymerase beta subunit N16961_VC02530 PF00542 Ribosomal protein L7/L12 C-terminal domain N16961_VC02530 PF16320 Ribosomal protein L7/L12 dimerisation domain N16961_VC02531 PF00466 Ribosomal protein L10 N16961_VC02532 PF00687 Ribosomal protein L1p/L10e family N16961_VC02533 PF03946 Ribosomal protein L11, N-terminal domain N16961_VC02533 PF00298 Ribosomal protein L11, RNA binding domain N16961_VC02534 PF02357 Transcription termination factor nusG N16961_VC02534 PF00467 KOW motif N16961_VC02535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N16961_VC02536 PF03143 Elongation factor Tu C-terminal domain N16961_VC02536 PF03144 Elongation factor Tu domain 2 N16961_VC02536 PF00009 Elongation factor Tu GTP binding domain N16961_VC02541 PF00485 Phosphoribulokinase / Uridine kinase family N16961_VC02542 PF08279 HTH domain N16961_VC02542 PF03099 Biotin/lipoate A/B protein ligase family N16961_VC02542 PF02237 Biotin protein ligase C terminal domain N16961_VC02543 PF01565 FAD binding domain N16961_VC02543 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N16961_VC02545 PF13091 PLD-like domain N16961_VC02551 PF00175 Oxidoreductase NAD-binding domain N16961_VC02552 PF00970 Oxidoreductase FAD-binding domain N16961_VC02552 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VC02552 PF00175 Oxidoreductase NAD-binding domain N16961_VC02553 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N16961_VC02555 PF07497 Rho termination factor, RNA-binding domain N16961_VC02555 PF07498 Rho termination factor, N-terminal domain N16961_VC02555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_VC02556 PF00085 Thioredoxin N16961_VC02557 PF00270 DEAD/DEAH box helicase N16961_VC02557 PF00271 Helicase conserved C-terminal domain N16961_VC02558 PF02541 Ppx/GppA phosphatase family N16961_VC02559 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02559 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC02559 PF00072 Response regulator receiver domain N16961_VC02559 PF09456 RcsC Alpha-Beta-Loop (ABL) N16961_VC02560 PF12832 MFS_1 like family N16961_VC02563 PF00501 AMP-binding enzyme N16961_VC02563 PF16177 Acetyl-coenzyme A synthetase N-terminus N16961_VC02563 PF13193 AMP-binding enzyme C-terminal domain N16961_VC02564 PF01220 Dehydroquinase class II N16961_VC02565 PF00364 Biotin-requiring enzyme N16961_VC02566 PF00289 Biotin carboxylase, N-terminal domain N16961_VC02566 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N16961_VC02566 PF02785 Biotin carboxylase C-terminal domain N16961_VC02568 PF01207 Dihydrouridine synthase (Dus) N16961_VC02569 PF02954 Bacterial regulatory protein, Fis family N16961_VC02570 PF00356 Bacterial regulatory proteins, lacI family N16961_VC02570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_VC02571 PF00920 Dehydratase family N16961_VC02572 PF01202 Shikimate kinase N16961_VC02573 PF02447 GntP family permease N16961_VC02574 PF01081 KDPG and KHG aldolase N16961_VC02575 PF00593 TonB dependent receptor N16961_VC02575 PF07715 TonB-dependent Receptor Plug Domain N16961_VC02578 PF00672 HAMP domain N16961_VC02578 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02578 PF17200 Single Cache domain 2 N16961_VC02579 PF01276 Orn/Lys/Arg decarboxylase, major domain N16961_VC02579 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N16961_VC02579 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N16961_VC02580 PF13520 Amino acid permease N16961_VC02581 PF18500 CadC C-terminal domain 1 N16961_VC02581 PF00486 Transcriptional regulatory protein, C terminal N16961_VC02582 PF13411 MerR HTH family regulatory protein N16961_VC02583 PF01808 AICARFT/IMPCHase bienzyme N16961_VC02583 PF02142 MGS-like domain N16961_VC02584 PF02843 Phosphoribosylglycinamide synthetase, C domain N16961_VC02584 PF02844 Phosphoribosylglycinamide synthetase, N domain N16961_VC02584 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N16961_VC02586 PF00216 Bacterial DNA-binding protein N16961_VC02588 PF01595 Cyclin M transmembrane N-terminal domain N16961_VC02588 PF00571 CBS domain N16961_VC02589 PF00480 ROK family N16961_VC02590 PF01238 Phosphomannose isomerase type I N16961_VC02591 PF04222 Protein of unknown function (DUF416) N16961_VC02592 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VC02593 PF03167 Uracil DNA glycosylase superfamily N16961_VC02594 PF00924 Mechanosensitive ion channel N16961_VC02595 PF10996 Beta-Casp domain N16961_VC02595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain N16961_VC02595 PF00753 Metallo-beta-lactamase superfamily N16961_VC02596 PF02397 Bacterial sugar transferase N16961_VC02597 PF01370 NAD dependent epimerase/dehydratase family N16961_VC02598 PF02719 Polysaccharide biosynthesis protein N16961_VC02601 PF00665 Integrase core domain N16961_VC02602 PF01527 Transposase N16961_VC02604 PF01609 Transposase DDE domain N16961_VC02604 PF13808 DDE_Tnp_1-associated N16961_VC02605 PF01609 Transposase DDE domain N16961_VC02605 PF13808 DDE_Tnp_1-associated N16961_VC02606 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC02608 PF00171 Aldehyde dehydrogenase family N16961_VC02608 PF00465 Iron-containing alcohol dehydrogenase N16961_VC02609 PF00501 AMP-binding enzyme N16961_VC02609 PF13193 AMP-binding enzyme C-terminal domain N16961_VC02611 PF00005 ABC transporter N16961_VC02611 PF14524 Wzt C-terminal domain N16961_VC02614 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N16961_VC02615 PF16363 GDP-mannose 4,6 dehydratase N16961_VC02616 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VC02616 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VC02616 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VC02616 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VC02617 PF00483 Nucleotidyl transferase N16961_VC02617 PF01050 Mannose-6-phosphate isomerase N16961_VC02618 PF01370 NAD dependent epimerase/dehydratase family N16961_VC02619 PF00457 Glycosyl hydrolases family 11 N16961_VC02619 PF01522 Polysaccharide deacetylase N16961_VC02622 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_VC02624 PF04488 Glycosyltransferase sugar-binding region containing DXD motif N16961_VC02625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N16961_VC02632 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_VC02633 PF00535 Glycosyl transferase family 2 N16961_VC02634 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_VC02635 PF01467 Cytidylyltransferase-like N16961_VC02636 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N16961_VC02636 PF06827 Zinc finger found in FPG and IleRS N16961_VC02636 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N16961_VC02638 PF00471 Ribosomal protein L33 N16961_VC02639 PF00830 Ribosomal L28 family N16961_VC02640 PF04002 RadC-like JAB domain N16961_VC02641 PF00672 HAMP domain N16961_VC02641 PF02743 Cache domain N16961_VC02641 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02642 PF02441 Flavoprotein N16961_VC02642 PF04127 DNA / pantothenate metabolism flavoprotein N16961_VC02643 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02644 PF03279 Bacterial lipid A biosynthesis acyltransferase N16961_VC02645 PF03279 Bacterial lipid A biosynthesis acyltransferase N16961_VC02646 PF00156 Phosphoribosyl transferase domain N16961_VC02647 PF03725 3' exoribonuclease family, domain 2 N16961_VC02647 PF01138 3' exoribonuclease family, domain 1 N16961_VC02648 PF03755 YicC-like family, N-terminal region N16961_VC02648 PF08340 Domain of unknown function (DUF1732) N16961_VC02649 PF03350 Uncharacterized protein family, UPF0114 N16961_VC02650 PF02378 Phosphotransferase system, EIIC N16961_VC02650 PF00367 phosphotransferase system, EIIB N16961_VC02651 PF13580 SIS domain N16961_VC02652 PF01380 SIS domain N16961_VC02652 PF01418 Helix-turn-helix domain, rpiR family N16961_VC02653 PF01032 FecCD transport family N16961_VC02654 PF01497 Periplasmic binding protein N16961_VC02655 PF00005 ABC transporter N16961_VC02656 PF00593 TonB dependent receptor N16961_VC02656 PF07715 TonB-dependent Receptor Plug Domain N16961_VC02657 PF00664 ABC transporter transmembrane region N16961_VC02657 PF00005 ABC transporter N16961_VC02660 PF09382 RQC domain N16961_VC02660 PF16124 RecQ zinc-binding N16961_VC02660 PF00570 HRDC domain N16961_VC02660 PF00271 Helicase conserved C-terminal domain N16961_VC02660 PF00270 DEAD/DEAH box helicase N16961_VC02661 PF00892 EamA-like transporter family N16961_VC02663 PF12833 Helix-turn-helix domain N16961_VC02664 PF01810 LysE type translocator N16961_VC02666 PF00580 UvrD/REP helicase N-terminal domain N16961_VC02666 PF13361 UvrD-like helicase C-terminal domain N16961_VC02667 PF01432 Peptidase family M3 N16961_VC02668 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N16961_VC02669 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC02669 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VC02682 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VC02684 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_VC02684 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02686 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC02687 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC02687 PF00005 ABC transporter N16961_VC02693 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N16961_VC02694 PF00580 UvrD/REP helicase N-terminal domain N16961_VC02694 PF13361 UvrD-like helicase C-terminal domain N16961_VC02695 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02696 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_VC02697 PF00873 AcrB/AcrD/AcrF family N16961_VC02698 PF04380 Membrane fusogenic activity N16961_VC02699 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N16961_VC02699 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N16961_VC02700 PF03466 LysR substrate binding domain N16961_VC02700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02707 PF12724 Flavodoxin domain N16961_VC02708 PF02386 Cation transport protein N16961_VC02709 PF09186 Domain of unknown function (DUF1949) N16961_VC02709 PF01205 Uncharacterized protein family UPF0029 N16961_VC02710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N16961_VC02710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N16961_VC02710 PF00378 Enoyl-CoA hydratase/isomerase N16961_VC02711 PF00108 Thiolase, N-terminal domain N16961_VC02711 PF02803 Thiolase, C-terminal domain N16961_VC02712 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02712 PF03466 LysR substrate binding domain N16961_VC02713 PF07690 Major Facilitator Superfamily N16961_VC02714 PF12804 MobA-like NTP transferase domain N16961_VC02714 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC02715 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain N16961_VC02715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N16961_VC02716 PF02874 ATP synthase alpha/beta family, beta-barrel domain N16961_VC02716 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_VC02717 PF00231 ATP synthase N16961_VC02718 PF02874 ATP synthase alpha/beta family, beta-barrel domain N16961_VC02718 PF00306 ATP synthase alpha/beta chain, C terminal domain N16961_VC02718 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_VC02719 PF00213 ATP synthase delta (OSCP) subunit N16961_VC02720 PF00430 ATP synthase B/B' CF(0) N16961_VC02721 PF00137 ATP synthase subunit C N16961_VC02722 PF00119 ATP synthase A chain N16961_VC02723 PF03899 ATP synthase I chain N16961_VC02724 PF02195 ParB-like nuclease domain N16961_VC02724 PF17762 HTH domain found in ParB protein N16961_VC02725 PF13614 AAA domain N16961_VC02726 PF02527 rRNA small subunit methyltransferase G N16961_VC02727 PF13932 GidA associated domain N16961_VC02727 PF01134 Glucose inhibited division protein A N16961_VC02728 PF00258 Flavodoxin N16961_VC02729 PF10396 GTP-binding protein TrmE N-terminus N16961_VC02729 PF12631 MnmE helical domain N16961_VC02729 PF01926 50S ribosome-binding GTPase N16961_VC02730 PF02096 60Kd inner membrane protein N16961_VC02730 PF14849 YidC periplasmic domain N16961_VC02731 PF00825 Ribonuclease P N16961_VC02732 PF00468 Ribosomal protein L34 N16961_VC02733 PF00005 ABC transporter N16961_VC02734 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02735 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA02736 PF02195 ParB-like nuclease domain N16961_VCA02736 PF08775 ParB family N16961_VCA02738 PF13614 AAA domain N16961_VCA02738 PF18607 ParA helix turn helix domain N16961_VCA02743 PF01709 Transcriptional regulator N16961_VCA02744 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N16961_VCA02744 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N16961_VCA02745 PF00672 HAMP domain N16961_VCA02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02745 PF17200 Single Cache domain 2 N16961_VCA02746 PF10928 Protein of unknown function (DUF2810) N16961_VCA02747 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA02747 PF17874 MalT-like TPR region N16961_VCA02748 PF00343 Carbohydrate phosphorylase N16961_VCA02749 PF02446 4-alpha-glucanotransferase N16961_VCA02750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N16961_VCA02750 PF02806 Alpha amylase, C-terminal all-beta domain N16961_VCA02750 PF00128 Alpha amylase, catalytic domain N16961_VCA02751 PF05638 Type VI secretion system effector, Hcp N16961_VCA02752 PF16671 Actin cross-linking domain N16961_VCA02752 PF04717 Type VI secretion system, phage-baseplate injector N16961_VCA02760 PF01168 Alanine racemase, N-terminal domain N16961_VCA02760 PF00842 Alanine racemase, C-terminal domain N16961_VCA02760 PF01757 Acyltransferase family N16961_VCA02762 PF00939 Sodium:sulfate symporter transmembrane region N16961_VCA02763 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N16961_VCA02764 PF08329 Chitinase A, N-terminal domain N16961_VCA02764 PF00704 Glycosyl hydrolases family 18 N16961_VCA02768 PF02743 Cache domain N16961_VCA02768 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02768 PF00672 HAMP domain N16961_VCA02772 PF01569 PAP2 superfamily N16961_VCA02773 PF00375 Sodium:dicarboxylate symporter family N16961_VCA02775 PF02630 SCO1/SenC N16961_VCA02779 PF03616 Sodium/glutamate symporter N16961_VCA02780 PF12945 Flagellar protein YcgR N16961_VCA02780 PF07238 PilZ domain N16961_VCA02783 PF00529 HlyD membrane-fusion protein of T1SS N16961_VCA02783 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_VCA02784 PF11742 Protein of unknown function (DUF3302) N16961_VCA02785 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA02788 PF01048 Phosphorylase superfamily N16961_VCA02789 PF08349 Protein of unknown function (DUF1722) N16961_VCA02790 PF13411 MerR HTH family regulatory protein N16961_VCA02791 PF03441 FAD binding domain of DNA photolyase N16961_VCA02791 PF00875 DNA photolyase N16961_VCA02792 PF03734 L,D-transpeptidase catalytic domain N16961_VCA02792 PF01476 LysM domain N16961_VCA02792 PF17969 L,D-transpeptidase C-terminal domain N16961_VCA02794 PF00271 Helicase conserved C-terminal domain N16961_VCA02794 PF00270 DEAD/DEAH box helicase N16961_VCA02795 PF00326 Prolyl oligopeptidase family N16961_VCA02795 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain N16961_VCA02796 PF07715 TonB-dependent Receptor Plug Domain N16961_VCA02796 PF00593 TonB dependent receptor N16961_VCA02800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02800 PF12729 Four helix bundle sensory module for signal transduction N16961_VCA02800 PF00672 HAMP domain N16961_VCA02801 PF12849 PBP superfamily domain N16961_VCA02802 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA02803 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA02804 PF00005 ABC transporter N16961_VCA02805 PF03707 Bacterial signalling protein N terminal repeat N16961_VCA02805 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA02805 PF00563 EAL domain N16961_VCA02808 PF00916 Sulfate permease family N16961_VCA02808 PF01740 STAS domain N16961_VCA02810 PF01476 LysM domain N16961_VCA02810 PF01551 Peptidase family M23 N16961_VCA02810 PF08525 Opacity-associated protein A N-terminal motif N16961_VCA02811 PF13188 PAS domain N16961_VCA02811 PF03707 Bacterial signalling protein N terminal repeat N16961_VCA02811 PF00563 EAL domain N16961_VCA02811 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA02813 PF03466 LysR substrate binding domain N16961_VCA02813 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA02814 PF07690 Major Facilitator Superfamily N16961_VCA02815 PF00376 MerR family regulatory protein N16961_VCA02815 PF09278 MerR, DNA binding N16961_VCA02819 PF00375 Sodium:dicarboxylate symporter family N16961_VCA02821 PF02001 Protein of unknown function DUF134 N16961_VCA02825 PF02868 Thermolysin metallopeptidase, alpha-helical domain N16961_VCA02825 PF01447 Thermolysin metallopeptidase, catalytic domain N16961_VCA02825 PF01483 Proprotein convertase P-domain N16961_VCA02825 PF07504 Fungalysin/Thermolysin Propeptide Motif N16961_VCA02827 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain N16961_VCA02827 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N16961_VCA02828 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N16961_VCA02828 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N16961_VCA02829 PF00581 Rhodanese-like domain N16961_VCA02830 PF00563 EAL domain N16961_VCA02830 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA02831 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA02832 PF00916 Sulfate permease family N16961_VCA02832 PF01740 STAS domain N16961_VCA02833 PF00849 RNA pseudouridylate synthase N16961_VCA02845 PF17871 AAA lid domain N16961_VCA02845 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VCA02845 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VCA02845 PF07724 AAA domain (Cdc48 subfamily) N16961_VCA02851 PF16671 Actin cross-linking domain N16961_VCA02851 PF04717 Type VI secretion system, phage-baseplate injector N16961_VCA02854 PF05025 RbsD / FucU transport protein family N16961_VCA02855 PF00005 ABC transporter N16961_VCA02856 PF02653 Branched-chain amino acid transport system / permease component N16961_VCA02857 PF13407 Periplasmic binding protein domain N16961_VCA02858 PF00294 pfkB family carbohydrate kinase N16961_VCA02859 PF00356 Bacterial regulatory proteins, lacI family N16961_VCA02860 PF04973 Nicotinamide mononucleotide transporter N16961_VCA02861 PF01048 Phosphorylase superfamily N16961_VCA02863 PF03009 Glycerophosphoryl diester phosphodiesterase family N16961_VCA02864 PF07690 Major Facilitator Superfamily N16961_VCA02867 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA02867 PF02743 Cache domain N16961_VCA02867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA02868 PF00072 Response regulator receiver domain N16961_VCA02868 PF02954 Bacterial regulatory protein, Fis family N16961_VCA02868 PF00158 Sigma-54 interaction domain N16961_VCA02871 PF01266 FAD dependent oxidoreductase N16961_VCA02872 PF00041 Fibronectin type III domain N16961_VCA02872 PF12561 ToxR activated gene A lipoprotein domain N16961_VCA02873 PF01327 Polypeptide deformylase N16961_VCA02875 PF03334 Na+/H+ antiporter subunit N16961_VCA02876 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) N16961_VCA02880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N16961_VCA02880 PF00361 Proton-conducting membrane transporter N16961_VCA02880 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter N16961_VCA02880 PF13244 Domain of unknown function (DUF4040) N16961_VCA02882 PF00582 Universal stress protein family N16961_VCA02883 PF03222 Tryptophan/tyrosine permease family N16961_VCA02884 PF01212 Beta-eliminating lyase N16961_VCA02886 PF12843 Putative quorum-sensing-regulated virulence factor N16961_VCA02888 PF08448 PAS fold N16961_VCA02888 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA02888 PF00563 EAL domain N16961_VCA02890 PF00313 'Cold-shock' DNA-binding domain N16961_VCA02893 PF07584 Aerotolerance regulator N-terminal N16961_VCA02893 PF13519 von Willebrand factor type A domain N16961_VCA02896 PF01882 Protein of unknown function DUF58 N16961_VCA02897 PF07726 ATPase family associated with various cellular activities (AAA) N16961_VCA02897 PF17863 AAA lid domain N16961_VCA02898 PF02743 Cache domain N16961_VCA02898 PF00672 HAMP domain N16961_VCA02898 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02901 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_VCA02901 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_VCA02901 PF07670 Nucleoside recognition N16961_VCA02902 PF07687 Peptidase dimerisation domain N16961_VCA02902 PF01546 Peptidase family M20/M25/M40 N16961_VCA02904 PF00158 Sigma-54 interaction domain N16961_VCA02904 PF01590 GAF domain N16961_VCA02905 PF00970 Oxidoreductase FAD-binding domain N16961_VCA02905 PF00042 Globin N16961_VCA02905 PF00175 Oxidoreductase NAD-binding domain N16961_VCA02907 PF00313 'Cold-shock' DNA-binding domain N16961_VCA02908 PF03889 Alternative ribosome-rescue factor A N16961_VCA02911 PF00072 Response regulator receiver domain N16961_VCA02913 PF01256 Carbohydrate kinase N16961_VCA02913 PF03853 YjeF-related protein N-terminus N16961_VCA02914 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VCA02914 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VCA02916 PF07885 Ion channel N16961_VCA02918 PF00478 IMP dehydrogenase / GMP reductase domain N16961_VCA02919 PF00145 C-5 cytosine-specific DNA methylase N16961_VCA02923 PF01797 Transposase IS200 like N16961_VCA02924 PF00270 DEAD/DEAH box helicase N16961_VCA02924 PF00271 Helicase conserved C-terminal domain N16961_VCA02925 PF03605 Anaerobic c4-dicarboxylate membrane transporter N16961_VCA02926 PF02540 NAD synthase N16961_VCA02927 PF01467 Cytidylyltransferase-like N16961_VCA02929 PF11849 Domain of unknown function (DUF3369) N16961_VCA02930 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA02930 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA02932 PF03553 Na+/H+ antiporter family N16961_VCA02934 PF07690 Major Facilitator Superfamily N16961_VCA02935 PF08448 PAS fold N16961_VCA02935 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA02936 PF00657 GDSL-like Lipase/Acylhydrolase N16961_VCA02937 PF16458 Beta-prism lectin N16961_VCA02937 PF12563 Hemolytic toxin N terminal N16961_VCA02937 PF07968 Leukocidin/Hemolysin toxin family N16961_VCA02938 PF00672 HAMP domain N16961_VCA02938 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02938 PF12729 Four helix bundle sensory module for signal transduction N16961_VCA02939 PF00561 alpha/beta hydrolase fold N16961_VCA02940 PF03280 Proteobacterial lipase chaperone protein N16961_VCA02941 PF05547 Immune inhibitor A peptidase M6 N16961_VCA02941 PF00801 PKD domain N16961_VCA02945 PF01032 FecCD transport family N16961_VCA02946 PF01032 FecCD transport family N16961_VCA02947 PF00005 ABC transporter N16961_VCA02948 PF12833 Helix-turn-helix domain N16961_VCA02949 PF00593 TonB dependent receptor N16961_VCA02949 PF07715 TonB-dependent Receptor Plug Domain N16961_VCA02951 PF00871 Acetokinase family N16961_VCA02954 PF00672 HAMP domain N16961_VCA02954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA02954 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA02955 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA02955 PF00072 Response regulator receiver domain N16961_VCA02957 PF01261 Xylose isomerase-like TIM barrel N16961_VCA02958 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N16961_VCA02960 PF00596 Class II Aldolase and Adducin N-terminal domain N16961_VCA02961 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VCA02962 PF03611 PTS system sugar-specific permease component N16961_VCA02963 PF00455 DeoR C terminal sensor domain N16961_VCA02963 PF08220 DeoR-like helix-turn-helix domain N16961_VCA02965 PF01292 Prokaryotic cytochrome b561 N16961_VCA02966 PF00128 Alpha amylase, catalytic domain N16961_VCA02967 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VCA02971 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA02971 PF00072 Response regulator receiver domain N16961_VCA02972 PF00672 HAMP domain N16961_VCA02972 PF14827 Double sensory domain of two-component sensor kinase N16961_VCA02972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA02972 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA02972 PF13426 PAS domain N16961_VCA02980 PF07690 Major Facilitator Superfamily N16961_VCA02981 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02981 PF00672 HAMP domain N16961_VCA02981 PF02743 Cache domain N16961_VCA02983 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_VCA02983 PF07943 Penicillin-binding protein 5, C-terminal domain N16961_VCA02986 PF00194 Eukaryotic-type carbonic anhydrase N16961_VCA02987 PF01797 Transposase IS200 like N16961_VCA02988 PF02347 Glycine cleavage system P-protein N16961_VCA02989 PF01597 Glycine cleavage H-protein N16961_VCA02990 PF00464 Serine hydroxymethyltransferase N16961_VCA02992 PF08669 Glycine cleavage T-protein C-terminal barrel domain N16961_VCA02992 PF01571 Aminomethyltransferase folate-binding domain N16961_VCA02994 PF01609 Transposase DDE domain N16961_VCA02994 PF05598 Transposase domain (DUF772) N16961_VCA02999 PF02824 TGS domain N16961_VCA02999 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N16961_VCA02999 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_VCA02999 PF03129 Anticodon binding domain N16961_VCA03000 PF00707 Translation initiation factor IF-3, C-terminal domain N16961_VCA03000 PF05198 Translation initiation factor IF-3, N-terminal domain N16961_VCA03001 PF01632 Ribosomal protein L35 N16961_VCA03002 PF00453 Ribosomal protein L20 N16961_VCA03003 PF00589 Phage integrase family N16961_VCA03003 PF13495 Phage integrase, N-terminal SAM-like domain N16961_VCA03010 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VCA03014 PF13286 Phosphohydrolase-associated domain N16961_VCA03014 PF01966 HD domain N16961_VCA03019 PF00293 NUDIX domain N16961_VCA03021 PF13302 Acetyltransferase (GNAT) domain N16961_VCA03022 PF08212 Lipocalin-like domain N16961_VCA03026 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ N16961_VCA03028 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03035 PF17676 LD-carboxypeptidase C-terminal domain N16961_VCA03035 PF02016 LD-carboxypeptidase N-terminal domain N16961_VCA03038 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03044 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03047 PF08212 Lipocalin-like domain N16961_VCA03049 PF04229 GrpB protein N16961_VCA03050 PF01810 LysE type translocator N16961_VCA03055 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH N16961_VCA03065 PF00665 Integrase core domain N16961_VCA03066 PF01527 Transposase N16961_VCA03077 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB N16961_VCA03078 PF01381 Helix-turn-helix N16961_VCA03079 PF02567 Phenazine biosynthesis-like protein N16961_VCA03085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03088 PF08212 Lipocalin-like domain N16961_VCA03095 PF13302 Acetyltransferase (GNAT) domain N16961_VCA03109 PF17676 LD-carboxypeptidase C-terminal domain N16961_VCA03109 PF02016 LD-carboxypeptidase N-terminal domain N16961_VCA03113 PF08212 Lipocalin-like domain N16961_VCA03114 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N16961_VCA03117 PF01555 DNA methylase N16961_VCA03126 PF12833 Helix-turn-helix domain N16961_VCA03126 PF01965 DJ-1/PfpI family N16961_VCA03132 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03137 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system N16961_VCA03138 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA N16961_VCA03141 PF01609 Transposase DDE domain N16961_VCA03141 PF05598 Transposase domain (DUF772) N16961_VCA03142 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VCA03145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03147 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N16961_VCA03158 PF07859 alpha/beta hydrolase fold N16961_VCA03161 PF01797 Transposase IS200 like N16961_VCA03171 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03173 PF01527 Transposase N16961_VCA03174 PF00665 Integrase core domain N16961_VCA03176 PF03477 ATP cone domain N16961_VCA03176 PF13597 Anaerobic ribonucleoside-triphosphate reductase N16961_VCA03178 PF00155 Aminotransferase class I and II N16961_VCA03179 PF18030 RimK PreATP-grasp domain N16961_VCA03179 PF08443 RimK-like ATP-grasp domain N16961_VCA03180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VCA03180 PF02378 Phosphotransferase system, EIIC N16961_VCA03181 PF00294 pfkB family carbohydrate kinase N16961_VCA03182 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VCA03182 PF00381 PTS HPr component phosphorylation site N16961_VCA03183 PF00356 Bacterial regulatory proteins, lacI family N16961_VCA03183 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_VCA03184 PF12320 Type 5 capsule protein repressor C-terminal domain N16961_VCA03184 PF00149 Calcineurin-like phosphoesterase N16961_VCA03185 PF13476 AAA domain N16961_VCA03186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03186 PF00072 Response regulator receiver domain N16961_VCA03187 PF00155 Aminotransferase class I and II N16961_VCA03189 PF00654 Voltage gated chloride channel N16961_VCA03190 PF07683 Cobalamin synthesis protein cobW C-terminal domain N16961_VCA03190 PF02492 CobW/HypB/UreG, nucleotide-binding domain N16961_VCA03191 PF01926 50S ribosome-binding GTPase N16961_VCA03192 PF02705 K+ potassium transporter N16961_VCA03193 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VCA03193 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg N16961_VCA03193 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase N16961_VCA03193 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II N16961_VCA03193 PF10371 Domain of unknown function N16961_VCA03194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03194 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03194 PF02702 Osmosensitive K+ channel His kinase sensor domain N16961_VCA03194 PF13493 Domain of unknown function (DUF4118) N16961_VCA03195 PF00072 Response regulator receiver domain N16961_VCA03195 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA03196 PF02416 mttA/Hcf106 family N16961_VCA03197 PF09335 SNARE associated Golgi protein N16961_VCA03199 PF00563 EAL domain N16961_VCA03199 PF10388 EAL-domain associated signalling protein domain N16961_VCA03201 PF01292 Prokaryotic cytochrome b561 N16961_VCA03202 PF04264 YceI-like domain N16961_VCA03203 PF01226 Formate/nitrite transporter N16961_VCA03204 PF03466 LysR substrate binding domain N16961_VCA03204 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03205 PF06496 Protein of unknown function (DUF1097) N16961_VCA03206 PF11398 Protein of unknown function (DUF2813) N16961_VCA03207 PF02872 5'-nucleotidase, C-terminal domain N16961_VCA03207 PF00149 Calcineurin-like phosphoesterase N16961_VCA03209 PF03741 Integral membrane protein TerC family N16961_VCA03211 PF03831 PhnA domain N16961_VCA03211 PF08274 PhnA Zinc-Ribbon N16961_VCA03217 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03217 PF17151 Periplasmic sensor domain N16961_VCA03221 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03221 PF17158 Membrane-associated sensor, integral membrane domain N16961_VCA03224 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N16961_VCA03224 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N16961_VCA03224 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N16961_VCA03225 PF02233 NAD(P) transhydrogenase beta subunit N16961_VCA03227 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA03227 PF00072 Response regulator receiver domain N16961_VCA03230 PF03701 Uncharacterised protein family (UPF0181) N16961_VCA03231 PF01253 Translation initiation factor SUI1 N16961_VCA03233 PF01820 D-ala D-ala ligase N-terminus N16961_VCA03233 PF07478 D-ala D-ala ligase C-terminus N16961_VCA03235 PF13607 Succinyl-CoA ligase like flavodoxin domain N16961_VCA03235 PF00583 Acetyltransferase (GNAT) family N16961_VCA03235 PF13380 CoA binding domain N16961_VCA03236 PF03466 LysR substrate binding domain N16961_VCA03236 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03237 PF00593 TonB dependent receptor N16961_VCA03237 PF07715 TonB-dependent Receptor Plug Domain N16961_VCA03238 PF12793 Sugar transport-related sRNA regulator N-term N16961_VCA03238 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VCA03240 PF03061 Thioesterase superfamily N16961_VCA03244 PF00043 Glutathione S-transferase, C-terminal domain N16961_VCA03244 PF02798 Glutathione S-transferase, N-terminal domain N16961_VCA03247 PF12804 MobA-like NTP transferase domain N16961_VCA03247 PF03479 Plants and Prokaryotes Conserved (PCC) domain N16961_VCA03247 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VCA03248 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VCA03248 PF00005 ABC transporter N16961_VCA03249 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03249 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_VCA03250 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03251 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VCA03256 PF00854 POT family N16961_VCA03258 PF07702 UTRA domain N16961_VCA03258 PF00392 Bacterial regulatory proteins, gntR family N16961_VCA03259 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03260 PF00005 ABC transporter N16961_VCA03262 PF00266 Aminotransferase class-V N16961_VCA03264 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA03265 PF14760 Rnk N-terminus N16961_VCA03265 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_VCA03266 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA03269 PF01741 Large-conductance mechanosensitive channel, MscL N16961_VCA03270 PF01268 Formate--tetrahydrofolate ligase N16961_VCA03271 PF01641 SelR domain N16961_VCA03271 PF01625 Peptide methionine sulfoxide reductase N16961_VCA03272 PF01227 GTP cyclohydrolase I N16961_VCA03273 PF00994 Probable molybdopterin binding domain N16961_VCA03273 PF03454 MoeA C-terminal region (domain IV) N16961_VCA03273 PF03453 MoeA N-terminal region (domain I and II) N16961_VCA03274 PF00899 ThiF family N16961_VCA03276 PF00581 Rhodanese-like domain N16961_VCA03277 PF04198 Putative sugar-binding domain N16961_VCA03278 PF00923 Transaldolase/Fructose-6-phosphate aldolase N16961_VCA03279 PF00456 Transketolase, thiamine diphosphate binding domain N16961_VCA03279 PF02780 Transketolase, C-terminal domain N16961_VCA03279 PF02779 Transketolase, pyrimidine binding domain N16961_VCA03282 PF07516 SecA Wing and Scaffold domain N16961_VCA03282 PF01043 SecA preprotein cross-linking domain N16961_VCA03282 PF07517 SecA DEAD-like domain N16961_VCA03282 PF02810 SEC-C motif N16961_VCA03284 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VCA03284 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VCA03287 PF06942 GlpM protein N16961_VCA03289 PF03466 LysR substrate binding domain N16961_VCA03289 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03290 PF03992 Antibiotic biosynthesis monooxygenase N16961_VCA03291 PF00881 Nitroreductase family N16961_VCA03292 PF00873 AcrB/AcrD/AcrF family N16961_VCA03295 PF04143 Sulphur transport N16961_VCA03298 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VCA03298 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VCA03307 PF02378 Phosphotransferase system, EIIC N16961_VCA03307 PF00367 phosphotransferase system, EIIB N16961_VCA03309 PF00251 Glycosyl hydrolases family 32 N-terminal domain N16961_VCA03309 PF08244 Glycosyl hydrolases family 32 C terminal N16961_VCA03310 PF00294 pfkB family carbohydrate kinase N16961_VCA03311 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N16961_VCA03311 PF01266 FAD dependent oxidoreductase N16961_VCA03312 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03312 PF00672 HAMP domain N16961_VCA03313 PF13488 Glycine zipper N16961_VCA03313 PF00691 OmpA family N16961_VCA03314 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VCA03314 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_VCA03315 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA03316 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03316 PF00672 HAMP domain N16961_VCA03316 PF12729 Four helix bundle sensory module for signal transduction N16961_VCA03317 PF03606 C4-dicarboxylate anaerobic carrier N16961_VCA03318 PF03313 Serine dehydratase alpha chain N16961_VCA03318 PF03315 Serine dehydratase beta chain N16961_VCA03319 PF00474 Sodium:solute symporter family N16961_VCA03323 PF00356 Bacterial regulatory proteins, lacI family N16961_VCA03324 PF00072 Response regulator receiver domain N16961_VCA03324 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03325 PF07730 Histidine kinase N16961_VCA03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N16961_VCA03325 PF00672 HAMP domain N16961_VCA03326 PF12838 4Fe-4S dicluster domain N16961_VCA03326 PF13187 4Fe-4S dicluster domain N16961_VCA03328 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N16961_VCA03328 PF01568 Molydopterin dinucleotide binding domain N16961_VCA03328 PF00384 Molybdopterin oxidoreductase N16961_VCA03329 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) N16961_VCA03330 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_VCA03332 PF01966 HD domain N16961_VCA03333 PF00072 Response regulator receiver domain N16961_VCA03333 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03334 PF07730 Histidine kinase N16961_VCA03334 PF05231 MASE1 N16961_VCA03334 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03335 PF07690 Major Facilitator Superfamily N16961_VCA03337 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03338 PF00005 ABC transporter N16961_VCA03338 PF08402 TOBE domain N16961_VCA03339 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus N16961_VCA03341 PF02803 Thiolase, C-terminal domain N16961_VCA03341 PF00108 Thiolase, N-terminal domain N16961_VCA03342 PF00106 short chain dehydrogenase N16961_VCA03343 PF07549 SecD/SecF GG Motif N16961_VCA03343 PF02355 Protein export membrane protein N16961_VCA03344 PF02355 Protein export membrane protein N16961_VCA03344 PF13721 SecD export protein N-terminal TM region N16961_VCA03344 PF07549 SecD/SecF GG Motif N16961_VCA03347 PF17158 Membrane-associated sensor, integral membrane domain N16961_VCA03347 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03348 PF00483 Nucleotidyl transferase N16961_VCA03349 PF06483 Chitinase C N16961_VCA03349 PF00704 Glycosyl hydrolases family 18 N16961_VCA03350 PF00465 Iron-containing alcohol dehydrogenase N16961_VCA03352 PF02954 Bacterial regulatory protein, Fis family N16961_VCA03352 PF00072 Response regulator receiver domain N16961_VCA03352 PF14532 Sigma-54 interaction domain N16961_VCA03353 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03353 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03353 PF02743 Cache domain N16961_VCA03355 PF07690 Major Facilitator Superfamily N16961_VCA03356 PF02887 Pyruvate kinase, alpha/beta domain N16961_VCA03356 PF00224 Pyruvate kinase, barrel domain N16961_VCA03357 PF01627 Hpt domain N16961_VCA03357 PF00072 Response regulator receiver domain N16961_VCA03357 PF00672 HAMP domain N16961_VCA03357 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03358 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_VCA03359 PF02142 MGS-like domain N16961_VCA03360 PF00857 Isochorismatase family N16961_VCA03361 PF01219 Prokaryotic diacylglycerol kinase N16961_VCA03364 PF12462 DNA helicase IV / RNA helicase N terminal N16961_VCA03364 PF00580 UvrD/REP helicase N-terminal domain N16961_VCA03364 PF13361 UvrD-like helicase C-terminal domain N16961_VCA03365 PF12805 FUSC-like inner membrane protein yccS N16961_VCA03366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03366 PF00072 Response regulator receiver domain N16961_VCA03366 PF13188 PAS domain N16961_VCA03366 PF08448 PAS fold N16961_VCA03366 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03371 PF00005 ABC transporter N16961_VCA03371 PF03459 TOBE domain N16961_VCA03372 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03374 PF07685 CobB/CobQ-like glutamine amidotransferase domain N16961_VCA03374 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N16961_VCA03382 PF00072 Response regulator receiver domain N16961_VCA03382 PF09308 LuxQ, periplasmic N16961_VCA03382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03382 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03383 PF13407 Periplasmic binding protein domain N16961_VCA03385 PF01541 GIY-YIG catalytic domain N16961_VCA03386 PF04337 Protein of unknown function, DUF480 N16961_VCA03388 PF04363 Protein of unknown function (DUF496) N16961_VCA03391 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N16961_VCA03391 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N16961_VCA03392 PF00230 Major intrinsic protein N16961_VCA03395 PF01266 FAD dependent oxidoreductase N16961_VCA03395 PF04324 BFD-like [2Fe-2S] binding domain N16961_VCA03396 PF00890 FAD binding domain N16961_VCA03397 PF02754 Cysteine-rich domain N16961_VCA03397 PF13183 4Fe-4S dicluster domain N16961_VCA03398 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N16961_VCA03398 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N16961_VCA03399 PF00085 Thioredoxin N16961_VCA03400 PF07690 Major Facilitator Superfamily N16961_VCA03405 PF03466 LysR substrate binding domain N16961_VCA03405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03406 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03407 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03408 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03409 PF00005 ABC transporter N16961_VCA03411 PF05762 VWA domain containing CoxE-like protein N16961_VCA03412 PF07728 AAA domain (dynein-related subfamily) N16961_VCA03412 PF17868 AAA lid domain N16961_VCA03412 PF12592 Protein of unknown function (DUF3763) N16961_VCA03413 PF00293 NUDIX domain N16961_VCA03414 PF01212 Beta-eliminating lyase N16961_VCA03415 PF00034 Cytochrome c N16961_VCA03416 PF08361 MAATS-type transcriptional repressor, C-terminal region N16961_VCA03416 PF00440 Bacterial regulatory proteins, tetR family N16961_VCA03417 PF00271 Helicase conserved C-terminal domain N16961_VCA03417 PF00270 DEAD/DEAH box helicase N16961_VCA03418 PF04336 Acyl carrier protein phosphodiesterase N16961_VCA03420 PF03222 Tryptophan/tyrosine permease family N16961_VCA03421 PF00672 HAMP domain N16961_VCA03421 PF12729 Four helix bundle sensory module for signal transduction N16961_VCA03421 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03422 PF16363 GDP-mannose 4,6 dehydratase N16961_VCA03423 PF03746 LamB/YcsF family N16961_VCA03425 PF02626 Carboxyltransferase domain, subdomain A and B N16961_VCA03427 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N16961_VCA03427 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N16961_VCA03429 PF00005 ABC transporter N16961_VCA03430 PF13472 GDSL-like Lipase/Acylhydrolase family N16961_VCA03431 PF12241 Trans-2-enoyl-CoA reductase catalytic region N16961_VCA03431 PF07055 Enoyl reductase FAD binding domain N16961_VCA03431 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N16961_VCA03432 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03432 PF00498 FHA domain N16961_VCA03432 PF00563 EAL domain N16961_VCA03434 PF00226 DnaJ domain N16961_VCA03434 PF01556 DnaJ C terminal domain N16961_VCA03434 PF00684 DnaJ central domain N16961_VCA03437 PF00665 Integrase core domain N16961_VCA03438 PF01527 Transposase N16961_VCA03441 PF02796 Helix-turn-helix domain of resolvase N16961_VCA03441 PF00239 Resolvase, N terminal domain N16961_VCA03443 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA03446 PF00294 pfkB family carbohydrate kinase N16961_VCA03447 PF00884 Sulfatase N16961_VCA03449 PF00271 Helicase conserved C-terminal domain N16961_VCA03449 PF00270 DEAD/DEAH box helicase N16961_VCA03449 PF03880 DbpA RNA binding domain N16961_VCA03450 PF00773 RNB domain N16961_VCA03450 PF08206 Ribonuclease B OB domain N16961_VCA03450 PF00575 S1 RNA binding domain N16961_VCA03452 PF12849 PBP superfamily domain N16961_VCA03453 PF01575 MaoC like domain N16961_VCA03454 PF04244 Deoxyribodipyrimidine photo-lyase-related protein N16961_VCA03456 PF18416 N-acetylglucosamine binding protein domain 2 N16961_VCA03456 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading N16961_VCA03457 PF03413 Peptidase propeptide and YPEB domain N16961_VCA03457 PF07504 Fungalysin/Thermolysin Propeptide Motif N16961_VCA03457 PF01447 Thermolysin metallopeptidase, catalytic domain N16961_VCA03457 PF02868 Thermolysin metallopeptidase, alpha-helical domain N16961_VCA03457 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VCA03458 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VCA03458 PF04389 Peptidase family M28 N16961_VCA03459 PF00491 Arginase family N16961_VCA03460 PF17810 Arginine decarboxylase helical bundle domain N16961_VCA03460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N16961_VCA03460 PF17944 Arginine decarboxylase C-terminal helical extension N16961_VCA03462 PF00571 CBS domain N16961_VCA03462 PF03448 MgtE intracellular N domain N16961_VCA03462 PF01769 Divalent cation transporter N16961_VCA03463 PF00166 Chaperonin 10 Kd subunit N16961_VCA03464 PF00118 TCP-1/cpn60 chaperonin family N16961_VCA03466 PF00696 Amino acid kinase family N16961_VCA03466 PF13840 ACT domain N16961_VCA03467 PF06339 Ectoine synthase N16961_VCA03468 PF00202 Aminotransferase class-III N16961_VCA03469 PF00583 Acetyltransferase (GNAT) family N16961_VCA03471 PF01329 Pterin 4 alpha carbinolamine dehydratase N16961_VCA03472 PF00351 Biopterin-dependent aromatic amino acid hydroxylase N16961_VCA03473 PF13193 AMP-binding enzyme C-terminal domain N16961_VCA03473 PF00501 AMP-binding enzyme N16961_VCA03477 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03477 PF03466 LysR substrate binding domain N16961_VCA03479 PF00892 EamA-like transporter family N16961_VCA03480 PF14602 Hexapeptide repeat of succinyl-transferase N16961_VCA03480 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VCA03480 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal N16961_VCA03481 PF00571 CBS domain N16961_VCA03481 PF01595 Cyclin M transmembrane N-terminal domain N16961_VCA03481 PF03471 Transporter associated domain N16961_VCA03482 PF02566 OsmC-like protein N16961_VCA03484 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VCA03485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_VCA03485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_VCA03488 PF13520 Amino acid permease N16961_VCA03489 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03491 PF00072 Response regulator receiver domain N16961_VCA03491 PF04397 LytTr DNA-binding domain N16961_VCA03492 PF07694 5TMR of 5TMR-LYT N16961_VCA03492 PF13492 GAF domain N16961_VCA03492 PF06580 Histidine kinase N16961_VCA03492 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03495 PF00005 ABC transporter N16961_VCA03495 PF12704 MacB-like periplasmic core domain N16961_VCA03495 PF02687 FtsX-like permease family N16961_VCA03496 PF00005 ABC transporter N16961_VCA03498 PF00248 Aldo/keto reductase family N16961_VCA03499 PF00128 Alpha amylase, catalytic domain N16961_VCA03500 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_VCA03501 PF12262 Bacterial virulence factor lipase N-terminal N16961_VCA03502 PF13426 PAS domain N16961_VCA03502 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03502 PF08447 PAS fold N16961_VCA03503 PF02868 Thermolysin metallopeptidase, alpha-helical domain N16961_VCA03503 PF03413 Peptidase propeptide and YPEB domain N16961_VCA03503 PF01447 Thermolysin metallopeptidase, catalytic domain N16961_VCA03503 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VCA03503 PF07504 Fungalysin/Thermolysin Propeptide Motif N16961_VCA03504 PF03922 OmpW family N16961_VCA03506 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_VCA03507 PF00155 Aminotransferase class I and II N16961_VCA03507 PF00392 Bacterial regulatory proteins, gntR family N16961_VCA03508 PF01654 Cytochrome bd terminal oxidase subunit I N16961_VCA03509 PF02322 Cytochrome bd terminal oxidase subunit II N16961_VCA03512 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VCA03513 PF03466 LysR substrate binding domain N16961_VCA03513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03520 PF08240 Alcohol dehydrogenase GroES-like domain N16961_VCA03520 PF00107 Zinc-binding dehydrogenase N16961_VCA03521 PF00155 Aminotransferase class I and II N16961_VCA03522 PF01965 DJ-1/PfpI family N16961_VCA03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03525 PF03466 LysR substrate binding domain N16961_VCA03526 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03531 PF01966 HD domain N16961_VCA03532 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N16961_VCA03532 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N16961_VCA03533 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N16961_VCA03534 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N16961_VCA03534 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N16961_VCA03539 PF02595 Glycerate kinase family N16961_VCA03540 PF02447 GntP family permease N16961_VCA03541 PF17853 GGDEF-like domain N16961_VCA03541 PF05651 Putative sugar diacid recognition N16961_VCA03541 PF13556 PucR C-terminal helix-turn-helix domain N16961_VCA03542 PF00672 HAMP domain N16961_VCA03542 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03543 PF01243 Pyridoxamine 5'-phosphate oxidase N16961_VCA03544 PF06228 Haem utilisation ChuX/HutX N16961_VCA03545 PF04055 Radical SAM superfamily N16961_VCA03546 PF03544 Gram-negative bacterial TonB protein C-terminal N16961_VCA03547 PF01618 MotA/TolQ/ExbB proton channel family N16961_VCA03548 PF02472 Biopolymer transport protein ExbD/TolR N16961_VCA03549 PF01497 Periplasmic binding protein N16961_VCA03550 PF01032 FecCD transport family N16961_VCA03551 PF00005 ABC transporter N16961_VCA03557 PF02743 Cache domain N16961_VCA03557 PF00672 HAMP domain N16961_VCA03557 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03558 PF03473 MOSC domain N16961_VCA03558 PF03476 MOSC N-terminal beta barrel domain N16961_VCA03558 PF03476 MOSC N-terminal beta barrel domain N16961_VCA03558 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VCA03558 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VCA03558 PF03473 MOSC domain N16961_VCA03559 PF01979 Amidohydrolase family N16961_VCA03561 PF05656 Protein of unknown function (DUF805) N16961_VCA03563 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_VCA03564 PF05661 Protein of unknown function (DUF808) N16961_VCA03567 PF00313 'Cold-shock' DNA-binding domain N16961_VCA03570 PF00072 Response regulator receiver domain N16961_VCA03570 PF12833 Helix-turn-helix domain N16961_VCA03572 PF08448 PAS fold N16961_VCA03572 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03573 PF08220 DeoR-like helix-turn-helix domain N16961_VCA03573 PF00455 DeoR C terminal sensor domain N16961_VCA03577 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03578 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03578 PF14785 Maltose transport system permease protein MalF P2 domain N16961_VCA03579 PF01547 Bacterial extracellular solute-binding protein N16961_VCA03580 PF00005 ABC transporter N16961_VCA03580 PF08402 TOBE domain N16961_VCA03581 PF13302 Acetyltransferase (GNAT) domain N16961_VCA03584 PF01906 Putative heavy-metal-binding N16961_VCA03585 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03587 PF01584 CheW-like domain N16961_VCA03587 PF00072 Response regulator receiver domain N16961_VCA03588 PF01047 MarR family N16961_VCA03589 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03593 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03593 PF00563 EAL domain N16961_VCA03593 PF03707 Bacterial signalling protein N terminal repeat N16961_VCA03597 PF03466 LysR substrate binding domain N16961_VCA03597 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03598 PF00990 Diguanylate cyclase, GGDEF domain N16961_VCA03598 PF00563 EAL domain N16961_VCA03600 PF05726 Pirin C-terminal cupin domain N16961_VCA03600 PF02678 Pirin N16961_VCA03601 PF06865 Pyrimidine/purine nucleoside phosphorylase N16961_VCA03603 PF07690 Major Facilitator Superfamily N16961_VCA03605 PF00672 HAMP domain N16961_VCA03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03605 PF17200 Single Cache domain 2 N16961_VCA03606 PF13654 AAA domain N16961_VCA03606 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_VCA03608 PF00005 ABC transporter N16961_VCA03608 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VCA03609 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03610 PF08447 PAS fold N16961_VCA03610 PF13426 PAS domain N16961_VCA03613 PF03466 LysR substrate binding domain N16961_VCA03613 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03614 PF02652 L-lactate permease N16961_VCA03615 PF01070 FMN-dependent dehydrogenase N16961_VCA03617 PF03618 Kinase/pyrophosphorylase N16961_VCA03618 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain N16961_VCA03618 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_VCA03618 PF00391 PEP-utilising enzyme, mobile domain N16961_VCA03619 PF08447 PAS fold N16961_VCA03619 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03620 PF01554 MatE N16961_VCA03621 PF00271 Helicase conserved C-terminal domain N16961_VCA03621 PF00270 DEAD/DEAH box helicase N16961_VCA03622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03622 PF03466 LysR substrate binding domain N16961_VCA03624 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_VCA03626 PF00005 ABC transporter N16961_VCA03626 PF00664 ABC transporter transmembrane region N16961_VCA03628 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_VCA03630 PF01810 LysE type translocator N16961_VCA03631 PF12833 Helix-turn-helix domain N16961_VCA03634 PF01557 Fumarylacetoacetate (FAA) hydrolase family N16961_VCA03635 PF01047 MarR family N16961_VCA03636 PF02566 OsmC-like protein N16961_VCA03637 PF13609 Gram-negative porin N16961_VCA03638 PF00892 EamA-like transporter family N16961_VCA03639 PF00462 Glutaredoxin N16961_VCA03640 PF07670 Nucleoside recognition N16961_VCA03641 PF07670 Nucleoside recognition N16961_VCA03642 PF03600 Citrate transporter N16961_VCA03644 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N16961_VCA03644 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N16961_VCA03645 PF06029 AlkA N-terminal domain N16961_VCA03645 PF00730 HhH-GPD superfamily base excision DNA repair protein N16961_VCA03646 PF07681 DoxX N16961_VCA03647 PF03466 LysR substrate binding domain N16961_VCA03647 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03651 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N16961_VCA03653 PF07148 Maltose operon periplasmic protein precursor (MalM) N16961_VCA03654 PF02264 LamB porin N16961_VCA03655 PF00128 Alpha amylase, catalytic domain N16961_VCA03655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N16961_VCA03657 PF12729 Four helix bundle sensory module for signal transduction N16961_VCA03657 PF00672 HAMP domain N16961_VCA03657 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03660 PF00672 HAMP domain N16961_VCA03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03662 PF00793 DAHP synthetase I family N16961_VCA03663 PF00005 ABC transporter N16961_VCA03664 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03665 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03666 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03667 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VCA03667 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VCA03667 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VCA03667 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VCA03668 PF04225 Opacity-associated protein A LysM-like domain N16961_VCA03668 PF01551 Peptidase family M23 N16961_VCA03671 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VCA03671 PF02378 Phosphotransferase system, EIIC N16961_VCA03671 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VCA03672 PF01232 Mannitol dehydrogenase Rossmann domain N16961_VCA03672 PF08125 Mannitol dehydrogenase C-terminal domain N16961_VCA03673 PF05068 Mannitol repressor N16961_VCA03674 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N16961_VCA03680 PF13460 NAD(P)H-binding N16961_VCA03681 PF03466 LysR substrate binding domain N16961_VCA03681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03682 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03682 PF00672 HAMP domain N16961_VCA03682 PF02743 Cache domain N16961_VCA03683 PF00106 short chain dehydrogenase N16961_VCA03684 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03684 PF03466 LysR substrate binding domain N16961_VCA03685 PF04013 Putative SAM-dependent RNA methyltransferase N16961_VCA03686 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N16961_VCA03688 PF13520 Amino acid permease N16961_VCA03689 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N16961_VCA03689 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N16961_VCA03689 PF01276 Orn/Lys/Arg decarboxylase, major domain N16961_VCA03690 PF00171 Aldehyde dehydrogenase family N16961_VCA03691 PF01037 Lrp/AsnC ligand binding domain N16961_VCA03692 PF00672 HAMP domain N16961_VCA03692 PF02743 Cache domain N16961_VCA03692 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03694 PF00474 Sodium:solute symporter family N16961_VCA03696 PF00171 Aldehyde dehydrogenase family N16961_VCA03696 PF14850 DNA-binding domain of Proline dehydrogenase N16961_VCA03696 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N16961_VCA03696 PF01619 Proline dehydrogenase N16961_VCA03697 PF12833 Helix-turn-helix domain N16961_VCA03699 PF03781 Sulfatase-modifying factor enzyme 1 N16961_VCA03700 PF00072 Response regulator receiver domain N16961_VCA03700 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03701 PF01243 Pyridoxamine 5'-phosphate oxidase N16961_VCA03701 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N16961_VCA03702 PF00529 HlyD membrane-fusion protein of T1SS N16961_VCA03705 PF00005 ABC transporter N16961_VCA03705 PF03412 Peptidase C39 family N16961_VCA03705 PF00664 ABC transporter transmembrane region N16961_VCA03707 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA03707 PF00072 Response regulator receiver domain N16961_VCA03709 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03709 PF00672 HAMP domain N16961_VCA03709 PF02743 Cache domain N16961_VCA03710 PF00072 Response regulator receiver domain N16961_VCA03710 PF01339 CheB methylesterase N16961_VCA03711 PF03975 CheD chemotactic sensory transduction N16961_VCA03712 PF01739 CheR methyltransferase, SAM binding domain N16961_VCA03712 PF03705 CheR methyltransferase, all-alpha domain N16961_VCA03713 PF02203 Tar ligand binding domain homologue N16961_VCA03713 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03713 PF00672 HAMP domain N16961_VCA03714 PF01584 CheW-like domain N16961_VCA03715 PF01584 CheW-like domain N16961_VCA03716 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03716 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_VCA03716 PF09078 CheY binding N16961_VCA03716 PF01584 CheW-like domain N16961_VCA03716 PF01627 Hpt domain N16961_VCA03717 PF00072 Response regulator receiver domain N16961_VCA03720 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03721 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03721 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_VCA03722 PF00005 ABC transporter N16961_VCA03722 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VCA03723 PF00884 Sulfatase N16961_VCA03723 PF08019 Phosphoethanolamine transferase EptA/EptB N16961_VCA03724 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03724 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03724 PF08521 Two-component sensor kinase N-terminal N16961_VCA03725 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA03725 PF00072 Response regulator receiver domain N16961_VCA03729 PF00501 AMP-binding enzyme N16961_VCA03731 PF05127 Helicase N16961_VCA03731 PF13718 GNAT acetyltransferase 2 N16961_VCA03732 PF13416 Bacterial extracellular solute-binding protein