N16961_VC00001 PF00308 Bacterial dnaA protein N16961_VC00001 PF08299 Bacterial dnaA protein helix-turn-helix N16961_VC00001 PF11638 DnaA N-terminal domain N16961_VC00003 PF00712 DNA polymerase III beta subunit, N-terminal domain N16961_VC00003 PF02767 DNA polymerase III beta subunit, central domain N16961_VC00003 PF02768 DNA polymerase III beta subunit, C-terminal domain N16961_VC00004 PF02463 RecF/RecN/SMC N terminal domain N16961_VC00005 PF00204 DNA gyrase B N16961_VC00005 PF00986 DNA gyrase B subunit, carboxyl terminus N16961_VC00005 PF01751 Toprim domain N16961_VC00005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00008 PF00011 Hsp20/alpha crystallin family N16961_VC00009 PF00155 Aminotransferase class I and II N16961_VC00010 PF02092 N16961_VC00010 N16961_VC00010 PF05746 DALR anticodon binding domain N16961_VC00011 PF02091 Glycyl-tRNA synthetase alpha subunit N16961_VC00013 PF01169 N16961_VC00013 N16961_VC00015 PF01206 Sulfurtransferase TusA N16961_VC00017 PF00107 Zinc-binding dehydrogenase N16961_VC00017 PF08240 Alcohol dehydrogenase GroES-like domain N16961_VC00018 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC00018 PF00585 C-terminal regulatory domain of Threonine dehydratase N16961_VC00019 PF00920 Dehydratase family N16961_VC00020 PF01063 Aminotransferase class IV N16961_VC00021 PF13710 ACT domain N16961_VC00022 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_VC00022 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VC00022 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_VC00023 PF01078 Magnesium chelatase, subunit ChlI N16961_VC00023 PF13335 N16961_VC00023 N16961_VC00023 PF13541 Subunit ChlI of Mg-chelatase N16961_VC00024 PF01553 Acyltransferase N16961_VC00025 PF01323 DSBA-like thioredoxin domain N16961_VC00026 PF01636 Phosphotransferase enzyme family N16961_VC00027 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase N16961_VC00027 PF12801 N16961_VC00027 N16961_VC00027 PF13746 4Fe-4S dicluster domain N16961_VC00028 PF06288 Protein of unknown function (DUF1040) N16961_VC00029 PF07070 N16961_VC00029 N16961_VC00030 PF03006 N16961_VC00030 N16961_VC00031 PF11355 N16961_VC00031 N16961_VC00032 PF02386 Cation transport protein N16961_VC00033 PF02080 TrkA-C domain N16961_VC00033 PF02254 TrkA-N domain N16961_VC00034 PF01029 NusB family N16961_VC00034 PF01189 NOL1/NOP2/sun family N16961_VC00035 PF00551 Formyl transferase N16961_VC00035 PF02911 Formyl transferase, C-terminal domain N16961_VC00036 PF01327 Polypeptide deformylase N16961_VC00037 PF01476 LysM domain N16961_VC00038 PF02481 DNA recombination-mediator protein A N16961_VC00039 PF04361 N16961_VC00039 N16961_VC00040 PF01396 N16961_VC00040 N16961_VC00041 PF02222 ATP-grasp domain N16961_VC00042 PF00731 AIR carboxylase N16961_VC00043 PF01300 Telomere recombination N16961_VC00044 PF01218 Coproporphyrinogen III oxidase N16961_VC00045 PF01488 Shikimate / quinate 5-dehydrogenase N16961_VC00045 PF08501 Shikimate dehydrogenase substrate binding domain N16961_VC00046 PF07369 Protein of unknown function (DUF1488) N16961_VC00047 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC00053 PF02537 N16961_VC00053 N16961_VC00055 PF01964 ThiC family N16961_VC00055 PF13667 ThiC-associated domain N16961_VC00056 PF02581 Thiamine monophosphate synthase/TENI N16961_VC00057 PF00899 ThiF family N16961_VC00058 PF02597 ThiS family N16961_VC00059 PF05690 Thiazole biosynthesis protein ThiG N16961_VC00060 PF04055 Radical SAM superfamily N16961_VC00060 PF06968 Biotin and Thiamin Synthesis associated domain N16961_VC00061 PF00557 Metallopeptidase family M24 N16961_VC00061 PF01321 Creatinase/Prolidase N-terminal domain N16961_VC00061 PF16188 N16961_VC00061 N16961_VC00061 PF16189 N16961_VC00061 N16961_VC00062 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00062 PF03466 LysR substrate binding domain N16961_VC00063 PF07690 Major Facilitator Superfamily N16961_VC00065 PF01037 AsnC family N16961_VC00065 PF13404 AsnC-type helix-turn-helix domain N16961_VC00066 PF00563 EAL domain N16961_VC00066 PF00990 GGDEF domain N16961_VC00066 PF13426 PAS domain N16961_VC00067 PF04445 Putative SAM-dependent methyltransferase N16961_VC00069 PF00892 EamA-like transporter family N16961_VC00070 PF00582 Universal stress protein family N16961_VC00071 PF00210 Ferritin-like domain N16961_VC00072 PF10625 N16961_VC00072 N16961_VC00073 PF03486 HI0933-like protein N16961_VC00074 PF00892 EamA-like transporter family N16961_VC00075 PF02646 N16961_VC00075 N16961_VC00076 PF01209 ubiE/COQ5 methyltransferase family N16961_VC00077 PF02036 SCP-2 sterol transfer family N16961_VC00078 PF03109 N16961_VC00078 N16961_VC00079 PF02416 mttA/Hcf106 family N16961_VC00080 PF02416 mttA/Hcf106 family N16961_VC00081 PF00902 Sec-independent protein translocase protein (TatC) N16961_VC00082 PF00034 Cytochrome c N16961_VC00082 PF03150 Di-haem cytochrome c peroxidase N16961_VC00083 PF01554 MatE N16961_VC00084 PF04072 Leucine carboxyl methyltransferase N16961_VC00085 PF00717 Peptidase S24-like N16961_VC00085 PF01726 LexA DNA binding domain N16961_VC00086 PF01553 Acyltransferase N16961_VC00087 PF01040 UbiA prenyltransferase family N16961_VC00088 PF04345 Chorismate lyase N16961_VC00089 PF03748 N16961_VC00089 N16961_VC00090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00090 PF08447 PAS fold N16961_VC00090 PF08448 PAS fold N16961_VC00091 PF01694 Rhomboid family N16961_VC00091 PF12122 Protein of unknown function (DUF3582) N16961_VC00092 PF00581 Rhodanese-like domain N16961_VC00093 PF01026 TatD related DNase N16961_VC00094 PF00490 Delta-aminolevulinic acid dehydratase N16961_VC00095 PF00583 Acetyltransferase (GNAT) family N16961_VC00097 PF00476 DNA polymerase family A N16961_VC00097 PF01367 5'-3' exonuclease, C-terminal SAM fold N16961_VC00097 PF01612 3'-5' exonuclease N16961_VC00097 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N16961_VC00099 PF01926 50S ribosome-binding GTPase N16961_VC00100 PF00034 Cytochrome c N16961_VC00101 PF13489 Methyltransferase domain N16961_VC00102 PF04220 N16961_VC00102 N16961_VC00103 PF10675 N16961_VC00103 N16961_VC00104 PF04055 Radical SAM superfamily N16961_VC00104 PF06969 HemN C-terminal domain N16961_VC00105 PF07219 N16961_VC00105 N16961_VC00106 PF04375 N16961_VC00106 N16961_VC00107 PF02602 Uroporphyrinogen-III synthase HemD N16961_VC00108 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N16961_VC00108 PF03900 Porphobilinogen deaminase, C-terminal domain N16961_VC00109 PF01295 N16961_VC00109 N16961_VC00109 PF12633 N16961_VC00109 N16961_VC00110 PF01491 Frataxin-like domain N16961_VC00111 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N16961_VC00111 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N16961_VC00112 PF01678 Diaminopimelate epimerase N16961_VC00113 PF04340 Protein of unknown function, DUF484 N16961_VC00114 PF00589 Phage integrase family N16961_VC00114 PF02899 Phage integrase, N-terminal SAM-like domain N16961_VC00115 PF13419 Haloacid dehalogenase-like hydrolase N16961_VC00116 PF00563 EAL domain N16961_VC00116 PF00990 GGDEF domain N16961_VC00116 PF08495 N16961_VC00116 N16961_VC00116 PF10442 N16961_VC00116 N16961_VC00117 PF03942 N16961_VC00117 N16961_VC00119 PF08282 haloacid dehalogenase-like hydrolase N16961_VC00120 PF12146 Putative lysophospholipase N16961_VC00121 PF01810 N16961_VC00121 N16961_VC00122 PF00563 EAL domain N16961_VC00122 PF08668 HDOD domain N16961_VC00123 PF00210 Ferritin-like domain N16961_VC00124 PF10694 Protein of unknown function (DUF2500) N16961_VC00125 PF13643 N16961_VC00125 N16961_VC00126 PF07947 N16961_VC00126 N16961_VC00127 PF06611 N16961_VC00127 N16961_VC00128 PF03602 Conserved hypothetical protein 95 N16961_VC00129 PF00448 SRP54-type protein, GTPase domain N16961_VC00129 PF02881 SRP54-type protein, helical bundle domain N16961_VC00130 PF00005 ABC transporter N16961_VC00132 PF00140 Sigma-70 factor, region 1 N16961_VC00132 PF04542 Sigma-70 region 2 N16961_VC00132 PF04545 Sigma-70, region 4 N16961_VC00133 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VC00133 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00134 PF00440 Bacterial regulatory proteins, tetR family N16961_VC00135 PF07226 N16961_VC00135 N16961_VC00136 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_VC00138 PF00593 TonB dependent receptor N16961_VC00138 PF07715 TonB-dependent Receptor Plug Domain N16961_VC00139 PF00082 Subtilase family N16961_VC00139 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VC00139 PF05922 Peptidase inhibitor I9 N16961_VC00140 PF01177 Asp/Glu/Hydantoin racemase N16961_VC00141 PF00076 RNA recognition motif N16961_VC00152 PF00962 Adenosine/AMP deaminase N16961_VC00153 PF00563 EAL domain N16961_VC00153 PF00990 GGDEF domain N16961_VC00153 PF02743 Cache domain N16961_VC00154 PF00072 Response regulator receiver domain N16961_VC00154 PF00158 Sigma-54 interaction domain N16961_VC00154 PF02954 Bacterial regulatory protein, Fis family N16961_VC00155 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00155 PF00989 PAS fold N16961_VC00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00156 PF13511 N16961_VC00156 N16961_VC00157 PF00120 Glutamine synthetase, catalytic domain N16961_VC00157 PF03951 Glutamine synthetase, beta-Grasp domain N16961_VC00159 PF00009 Elongation factor Tu GTP binding domain N16961_VC00159 PF00679 Elongation factor G C-terminus N16961_VC00159 PF03144 Elongation factor Tu domain 2 N16961_VC00160 PF13521 AAA domain N16961_VC00161 PF03631 N16961_VC00161 N16961_VC00162 PF02580 D-Tyr-tRNA(Tyr) deacylase N16961_VC00163 PF09500 Putative thioesterase (yiiD_Cterm) N16961_VC00163 PF13673 Acetyltransferase (GNAT) domain N16961_VC00164 PF05170 N16961_VC00164 N16961_VC00165 PF01293 Phosphoenolpyruvate carboxykinase N16961_VC00166 PF01430 Hsp33 protein N16961_VC00167 PF01479 S4 domain N16961_VC00168 PF11356 Type IV pilus biogenesis N16961_VC00169 PF00263 N16961_VC00169 N16961_VC00169 PF03958 Bacterial type II/III secretion system short domain N16961_VC00170 PF00437 Type II/IV secretion system protein N16961_VC00171 PF00482 Type II secretion system (T2SS), protein F N16961_VC00172 PF07963 Prokaryotic N-terminal methylation motif N16961_VC00172 PF08334 Type II secretion system (T2SS), protein G N16961_VC00173 PF12019 Type II transport protein GspH N16961_VC00174 PF02501 Type II secretion system (T2SS), protein I N16961_VC00174 PF07963 Prokaryotic N-terminal methylation motif N16961_VC00175 PF07963 Prokaryotic N-terminal methylation motif N16961_VC00175 PF11612 Type II secretion system (T2SS), protein J N16961_VC00176 PF03934 Type II secretion system (T2SS), protein K N16961_VC00177 PF05134 Type II secretion system (T2SS), protein L N16961_VC00177 PF12693 GspL periplasmic domain N16961_VC00178 PF04612 Type II secretion system (T2SS), protein M N16961_VC00179 PF01203 N16961_VC00179 N16961_VC00180 PF00459 Inositol monophosphatase family N16961_VC00181 PF00293 NUDIX domain N16961_VC00182 PF01106 NifU-like domain N16961_VC00182 PF01521 Iron-sulphur cluster biosynthesis N16961_VC00183 PF00156 Phosphoribosyl transferase domain N16961_VC00184 PF00561 alpha/beta hydrolase fold N16961_VC00186 PF00575 S1 RNA binding domain N16961_VC00186 PF09371 Tex-like protein N-terminal domain N16961_VC00186 PF12836 Helix-hairpin-helix motif N16961_VC00186 PF16921 N16961_VC00186 N16961_VC00187 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_VC00187 PF03449 Transcription elongation factor, N-terminal N16961_VC00188 PF00072 Response regulator receiver domain N16961_VC00188 PF00486 Transcriptional regulatory protein, C terminal N16961_VC00189 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00189 PF00672 HAMP domain N16961_VC00189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00190 PF00860 Permease family N16961_VC00191 PF00270 DEAD/DEAH box helicase N16961_VC00191 PF00271 Helicase conserved C-terminal domain N16961_VC00191 PF17191 N16961_VC00191 N16961_VC00193 PF02824 TGS domain N16961_VC00193 PF04607 Region found in RelA / SpoT proteins N16961_VC00193 PF13291 ACT domain N16961_VC00193 PF13328 HD domain N16961_VC00194 PF01192 RNA polymerase Rpb6 N16961_VC00195 PF00625 Guanylate kinase N16961_VC00196 PF02592 N16961_VC00196 N16961_VC00197 PF00474 Sodium:solute symporter family N16961_VC00198 PF13937 N16961_VC00198 N16961_VC00199 PF00999 Sodium/hydrogen exchanger family N16961_VC00199 PF02080 TrkA-C domain N16961_VC00199 PF03471 Transporter associated domain N16961_VC00200 PF00072 Response regulator receiver domain N16961_VC00200 PF00196 Bacterial regulatory proteins, luxR family N16961_VC00201 PF02683 N16961_VC00201 N16961_VC00201 PF11412 Disulphide bond corrector protein DsbC N16961_VC00201 PF13899 Thioredoxin-like N16961_VC00202 PF11852 Domain of unknown function (DUF3372) N16961_VC00203 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N16961_VC00203 PF03714 Bacterial pullanase-associated domain N16961_VC00204 PF03605 N16961_VC00204 N16961_VC00205 PF00206 Lyase N16961_VC00205 PF10415 Fumarase C C-terminus N16961_VC00206 PF00990 GGDEF domain N16961_VC00207 PF04186 N16961_VC00207 N16961_VC00208 PF00588 SpoU rRNA Methylase family N16961_VC00209 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N16961_VC00209 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N16961_VC00210 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00210 PF00672 HAMP domain N16961_VC00210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00210 PF16527 N16961_VC00210 N16961_VC00211 PF00072 Response regulator receiver domain N16961_VC00211 PF00486 Transcriptional regulatory protein, C terminal N16961_VC00212 PF07813 LTXXQ motif family protein N16961_VC00213 PF01545 Cation efflux family N16961_VC00213 PF16916 N16961_VC00213 N16961_VC00214 PF00365 Phosphofructokinase N16961_VC00215 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N16961_VC00216 PF06005 Protein of unknown function (DUF904) N16961_VC00217 PF02219 Methylenetetrahydrofolate reductase N16961_VC00218 PF00696 Amino acid kinase family N16961_VC00218 PF00742 Homoserine dehydrogenase N16961_VC00218 PF03447 Homoserine dehydrogenase, NAD binding domain N16961_VC00219 PF01053 Cys/Met metabolism PLP-dependent enzyme N16961_VC00220 PF01340 Met Apo-repressor, MetJ N16961_VC00221 PF00390 Malic enzyme, N-terminal domain N16961_VC00221 PF03949 Malic enzyme, NAD binding domain N16961_VC00222 PF01197 Ribosomal protein L31 N16961_VC00223 PF00270 DEAD/DEAH box helicase N16961_VC00223 PF00271 Helicase conserved C-terminal domain N16961_VC00224 PF00356 Bacterial regulatory proteins, lacI family N16961_VC00224 PF13377 Periplasmic binding protein-like domain N16961_VC00225 PF05036 Sporulation related domain N16961_VC00226 PF00227 Proteasome subunit N16961_VC00227 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC00227 PF07724 AAA domain (Cdc48 subfamily) N16961_VC00227 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VC00228 PF01040 UbiA prenyltransferase family N16961_VC00229 PF03737 Demethylmenaquinone methyltransferase N16961_VC00230 PF01554 MatE N16961_VC00231 PF00121 Triosephosphate isomerase N16961_VC00232 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase N16961_VC00233 PF05656 N16961_VC00233 N16961_VC00234 PF11333 N16961_VC00234 N16961_VC00235 PF13412 Winged helix-turn-helix DNA-binding N16961_VC00236 PF00166 Chaperonin 10 Kd subunit N16961_VC00237 PF00118 TCP-1/cpn60 chaperonin family N16961_VC00239 PF04055 Radical SAM superfamily N16961_VC00239 PF13353 4Fe-4S single cluster domain N16961_VC00240 PF01132 Elongation factor P (EF-P) OB domain N16961_VC00240 PF08207 Elongation factor P (EF-P) KOW-like domain N16961_VC00240 PF09285 Elongation factor P, C-terminal N16961_VC00241 PF02313 Fumarate reductase subunit D N16961_VC00242 PF02300 Fumarate reductase subunit C N16961_VC00243 PF13085 2Fe-2S iron-sulfur cluster binding domain N16961_VC00243 PF13183 4Fe-4S dicluster domain N16961_VC00244 PF00890 FAD binding domain N16961_VC00244 PF02910 Fumarate reductase flavoprotein C-term N16961_VC00245 PF00152 tRNA synthetases class II (D, K and N) N16961_VC00246 PF00581 Rhodanese-like domain N16961_VC00247 PF02556 Preprotein translocase subunit SecB N16961_VC00248 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N16961_VC00248 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N16961_VC00249 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC00249 PF06426 Serine acetyltransferase, N-terminal N16961_VC00250 PF03551 Transcriptional regulator PadR-like family N16961_VC00250 PF10400 Virulence activator alpha C-term N16961_VC00251 PF00311 Phosphoenolpyruvate carboxylase N16961_VC00252 PF01546 Peptidase family M20/M25/M40 N16961_VC00252 PF07687 Peptidase dimerisation domain N16961_VC00253 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_VC00253 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_VC00254 PF00696 Amino acid kinase family N16961_VC00255 PF00764 Arginosuccinate synthase N16961_VC00256 PF00206 Lyase N16961_VC00256 PF14698 Argininosuccinate lyase C-terminal N16961_VC00257 PF12292 N16961_VC00257 N16961_VC00258 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VC00258 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00259 PF00462 Glutaredoxin N16961_VC00259 PF08534 Redoxin N16961_VC00260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00260 PF03466 LysR substrate binding domain N16961_VC00261 PF00905 Penicillin binding protein transpeptidase domain N16961_VC00261 PF00912 Transglycosylase N16961_VC00261 PF17092 N16961_VC00261 N16961_VC00262 PF11104 Type IV pilus assembly protein PilM; N16961_VC00263 PF05137 N16961_VC00263 N16961_VC00264 PF04350 Pilus assembly protein, PilO N16961_VC00265 PF04351 Pilus assembly protein, PilP N16961_VC00266 PF00263 N16961_VC00266 N16961_VC00266 PF03958 Bacterial type II/III secretion system short domain N16961_VC00267 PF01202 Shikimate kinase N16961_VC00268 PF01761 3-dehydroquinate synthase N16961_VC00269 PF05036 Sporulation related domain N16961_VC00269 PF13401 AAA domain N16961_VC00270 PF02086 D12 class N6 adenine-specific DNA methyltransferase N16961_VC00271 PF00834 Ribulose-phosphate 3 epimerase family N16961_VC00272 PF13419 Haloacid dehalogenase-like hydrolase N16961_VC00273 PF00579 tRNA synthetases class I (W and Y) N16961_VC00274 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC00275 PF00932 Lamin Tail Domain N16961_VC00276 PF00919 Uncharacterized protein family UPF0004 N16961_VC00276 PF04055 Radical SAM superfamily N16961_VC00277 PF00117 Glutamine amidotransferase class-I N16961_VC00278 PF00202 Aminotransferase class-III N16961_VC00279 PF04958 Arginine N-succinyltransferase beta subunit N16961_VC00280 PF00171 Aldehyde dehydrogenase family N16961_VC00281 PF07063 Domain of unknown function (DUF1338) N16961_VC00282 PF00027 Cyclic nucleotide-binding domain N16961_VC00282 PF00325 Bacterial regulatory proteins, crp family N16961_VC00283 PF00485 Phosphoribulokinase / Uridine kinase family N16961_VC00284 PF06794 Uncharacterised protein family (UPF0270) N16961_VC00285 PF00561 alpha/beta hydrolase fold N16961_VC00286 PF09523 N16961_VC00286 N16961_VC00287 PF00005 ABC transporter N16961_VC00287 PF09496 Cenp-O kinetochore centromere component N16961_VC00287 PF12848 ABC transporter N16961_VC00288 PF02525 Flavodoxin-like fold N16961_VC00289 PF00999 Sodium/hydrogen exchanger family N16961_VC00289 PF02254 TrkA-N domain N16961_VC00291 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC00292 PF01112 Asparaginase N16961_VC00293 PF00709 Adenylosuccinate synthetase N16961_VC00294 PF08238 Sel1 repeat N16961_VC00295 PF00884 Sulfatase N16961_VC00295 PF11893 N16961_VC00295 N16961_VC00296 PF00575 S1 RNA binding domain N16961_VC00296 PF00773 RNB domain N16961_VC00296 PF08206 Ribonuclease B OB domain N16961_VC00296 PF08461 Ribonuclease R winged-helix domain N16961_VC00297 PF00588 SpoU rRNA Methylase family N16961_VC00297 PF08032 RNA 2'-O ribose methyltransferase substrate binding N16961_VC00298 PF00338 Ribosomal protein S10p/S20e N16961_VC00299 PF00297 Ribosomal protein L3 N16961_VC00300 PF00573 Ribosomal protein L4/L1 family N16961_VC00301 PF00276 Ribosomal protein L23 N16961_VC00302 PF00181 Ribosomal Proteins L2, RNA binding domain N16961_VC00302 PF03947 Ribosomal Proteins L2, C-terminal domain N16961_VC00303 PF00203 Ribosomal protein S19 N16961_VC00304 PF00237 Ribosomal protein L22p/L17e N16961_VC00305 PF00189 Ribosomal protein S3, C-terminal domain N16961_VC00305 PF07650 KH domain N16961_VC00306 PF00252 Ribosomal protein L16p/L10e N16961_VC00307 PF00831 Ribosomal L29 protein N16961_VC00308 PF00366 Ribosomal protein S17 N16961_VC00309 PF00238 Ribosomal protein L14p/L23e N16961_VC00310 PF00467 KOW motif N16961_VC00310 PF17136 N16961_VC00310 N16961_VC00311 PF00281 Ribosomal protein L5 N16961_VC00311 PF00673 ribosomal L5P family C-terminus N16961_VC00312 PF00253 Ribosomal protein S14p/S29e N16961_VC00313 PF00410 Ribosomal protein S8 N16961_VC00314 PF00347 Ribosomal protein L6 N16961_VC00315 PF00861 Ribosomal L18p/L5e family N16961_VC00316 PF00333 Ribosomal protein S5, N-terminal domain N16961_VC00316 PF03719 Ribosomal protein S5, C-terminal domain N16961_VC00317 PF00327 Ribosomal protein L30p/L7e N16961_VC00318 PF00828 Ribosomal protein L18e/L15 N16961_VC00319 PF00344 SecY translocase N16961_VC00320 PF00444 Ribosomal protein L36 N16961_VC00322 PF00416 Ribosomal protein S13/S18 N16961_VC00323 PF00411 Ribosomal protein S11 N16961_VC00324 PF00163 Ribosomal protein S4/S9 N-terminal domain N16961_VC00324 PF01479 S4 domain N16961_VC00325 PF01000 RNA polymerase Rpb3/RpoA insert domain N16961_VC00325 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N16961_VC00325 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N16961_VC00326 PF01196 Ribosomal protein L17 N16961_VC00327 PF11075 N16961_VC00327 N16961_VC00328 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC00328 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_VC00329 PF04225 Opacity-associated protein A LysM-like domain N16961_VC00329 PF08525 N16961_VC00329 N16961_VC00330 PF00892 EamA-like transporter family N16961_VC00331 PF13673 Acetyltransferase (GNAT) domain N16961_VC00332 PF00270 DEAD/DEAH box helicase N16961_VC00332 PF00271 Helicase conserved C-terminal domain N16961_VC00332 PF03880 DbpA RNA binding domain N16961_VC00334 PF00149 Calcineurin-like phosphoesterase N16961_VC00334 PF02872 5'-nucleotidase, C-terminal domain N16961_VC00335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N16961_VC00336 PF01507 Phosphoadenosine phosphosulfate reductase family N16961_VC00337 PF00009 Elongation factor Tu GTP binding domain N16961_VC00338 PF01583 Adenylylsulphate kinase N16961_VC00339 PF10987 N16961_VC00339 N16961_VC00340 PF11736 Protein of unknown function (DUF3299) N16961_VC00341 PF02687 N16961_VC00341 N16961_VC00341 PF12704 MacB-like periplasmic core domain N16961_VC00342 PF00005 ABC transporter N16961_VC00343 PF10986 N16961_VC00343 N16961_VC00344 PF10795 N16961_VC00344 N16961_VC00345 PF09695 N16961_VC00345 N16961_VC00346 PF01625 Peptide methionine sulfoxide reductase N16961_VC00347 PF01103 Surface antigen N16961_VC00347 PF17243 N16961_VC00347 N16961_VC00348 PF04357 N16961_VC00348 N16961_VC00349 PF06094 AIG2-like family N16961_VC00350 PF00719 Inorganic pyrophosphatase N16961_VC00351 PF00316 Fructose-1-6-bisphosphatase N16961_VC00352 PF01225 Mur ligase family, catalytic domain N16961_VC00352 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00352 PF08245 Mur ligase middle domain N16961_VC00353 PF02441 Flavoprotein N16961_VC00354 PF13343 Bacterial extracellular solute-binding protein N16961_VC00355 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC00356 PF00005 ABC transporter N16961_VC00357 PF04751 Protein of unknown function (DUF615) N16961_VC00358 PF01523 Putative modulator of DNA gyrase N16961_VC00359 PF00571 CBS domain N16961_VC00359 PF01769 Divalent cation transporter N16961_VC00359 PF03448 MgtE intracellular N domain N16961_VC00360 PF00381 PTS HPr component phosphorylation site N16961_VC00361 PF03668 N16961_VC00361 N16961_VC00362 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VC00363 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N16961_VC00364 PF00309 N16961_VC00364 N16961_VC00364 PF04552 Sigma-54, DNA binding domain N16961_VC00364 PF04963 Sigma-54 factor, core binding domain N16961_VC00365 PF00005 ABC transporter N16961_VC00365 PF12399 Branched-chain amino acid ATP-binding cassette transporter N16961_VC00366 PF03968 OstA-like protein N16961_VC00367 PF06835 Lipopolysaccharide-assembly, LptC-related N16961_VC00368 PF08282 haloacid dehalogenase-like hydrolase N16961_VC00369 PF00571 CBS domain N16961_VC00369 PF01380 SIS domain N16961_VC00370 PF01699 Sodium/calcium exchanger protein N16961_VC00371 PF00005 ABC transporter N16961_VC00372 PF02405 N16961_VC00372 N16961_VC00373 PF02470 N16961_VC00373 N16961_VC00374 PF05494 Toluene tolerance, Ttg2 N16961_VC00375 PF13466 STAS domain N16961_VC00376 PF01722 BolA-like protein N16961_VC00377 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N16961_VC00378 PF01553 Acyltransferase N16961_VC00379 PF01042 Endoribonuclease L-PSP N16961_VC00380 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain N16961_VC00380 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain N16961_VC00381 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N16961_VC00381 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N16961_VC00382 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N16961_VC00382 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N16961_VC00383 PF02562 PhoH-like protein N16961_VC00383 PF13638 PIN domain N16961_VC00384 PF00176 SNF2 family N-terminal domain N16961_VC00384 PF00271 Helicase conserved C-terminal domain N16961_VC00384 PF12137 RNA polymerase recycling family C-terminal N16961_VC00385 PF00849 RNA pseudouridylate synthase N16961_VC00386 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VC00386 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VC00387 PF00133 tRNA synthetases class I (I, L, M and V) N16961_VC00387 PF08264 Anticodon-binding domain of tRNA N16961_VC00387 PF10458 Valyl tRNA synthetase tRNA binding arm N16961_VC00388 PF04364 DNA polymerase III chi subunit, HolC N16961_VC00389 PF00883 Cytosol aminopeptidase family, catalytic domain N16961_VC00389 PF02789 Cytosol aminopeptidase family, N-terminal domain N16961_VC00390 PF03739 N16961_VC00390 N16961_VC00391 PF03739 N16961_VC00391 N16961_VC00392 PF06271 N16961_VC00392 N16961_VC00394 PF01966 HD domain N16961_VC00394 PF11871 N16961_VC00394 N16961_VC00401 PF04784 N16961_VC00401 N16961_VC00402 PF00694 Aconitase C-terminal domain N16961_VC00403 PF00330 Aconitase family (aconitate hydratase) N16961_VC00404 PF00180 Isocitrate/isopropylmalate dehydrogenase N16961_VC00405 PF00682 HMGL-like N16961_VC00405 PF08502 LeuA allosteric (dimerisation) domain N16961_VC00406 PF00440 Bacterial regulatory proteins, tetR family N16961_VC00406 PF14514 Transcriptional regulator, TetR, C-terminal N16961_VC00407 PF01569 PAP2 superfamily N16961_VC00408 PF13528 Glycosyl transferase family 1 N16961_VC00409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00409 PF03466 LysR substrate binding domain N16961_VC00410 PF00501 AMP-binding enzyme N16961_VC00411 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_VC00411 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VC00411 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_VC00412 PF10369 Small subunit of acetolactate synthase N16961_VC00412 PF13710 ACT domain N16961_VC00413 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VC00413 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VC00414 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N16961_VC00415 PF01812 5-formyltetrahydrofolate cyclo-ligase family N16961_VC00417 PF05164 Cell division protein ZapA N16961_VC00418 PF03695 Uncharacterised protein family (UPF0149) N16961_VC00419 PF01494 FAD binding domain N16961_VC00420 PF01494 FAD binding domain N16961_VC00421 PF06526 Protein of unknown function (DUF1107) N16961_VC00422 PF01571 Aminomethyltransferase folate-binding domain N16961_VC00423 PF03937 Flavinator of succinate dehydrogenase N16961_VC00425 PF00890 FAD binding domain N16961_VC00425 PF02910 Fumarate reductase flavoprotein C-term N16961_VC00426 PF04542 Sigma-70 region 2 N16961_VC00426 PF08281 Sigma-70, region 4 N16961_VC00427 PF03872 Anti sigma-E protein RseA, N-terminal domain N16961_VC00427 PF03873 Anti sigma-E protein RseA, C-terminal domain N16961_VC00428 PF03888 MucB/RseB family N16961_VC00428 PF17188 N16961_VC00428 N16961_VC00429 PF04246 N16961_VC00429 N16961_VC00430 PF00009 Elongation factor Tu GTP binding domain N16961_VC00430 PF00679 Elongation factor G C-terminus N16961_VC00430 PF03144 Elongation factor Tu domain 2 N16961_VC00430 PF06421 GTP-binding protein LepA C-terminus N16961_VC00431 PF00717 Peptidase S24-like N16961_VC00431 PF10502 Signal peptidase, peptidase S26 N16961_VC00432 PF00035 Double-stranded RNA binding motif N16961_VC00432 PF14622 Ribonuclease-III-like N16961_VC00433 PF01926 50S ribosome-binding GTPase N16961_VC00433 PF07650 KH domain N16961_VC00434 PF02565 Recombination protein O C terminal N16961_VC00434 PF11967 Recombination protein O N terminal N16961_VC00435 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N16961_VC00436 PF01648 4'-phosphopantetheinyl transferase superfamily N16961_VC00439 PF00990 GGDEF domain N16961_VC00440 PF00072 Response regulator receiver domain N16961_VC00440 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00440 PF01627 Hpt domain N16961_VC00440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00440 PF09984 N16961_VC00440 N16961_VC00441 PF01938 TRAM domain N16961_VC00441 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_VC00442 PF02824 TGS domain N16961_VC00442 PF04607 Region found in RelA / SpoT proteins N16961_VC00442 PF13291 ACT domain N16961_VC00442 PF13328 HD domain N16961_VC00443 PF03819 MazG nucleotide pyrophosphohydrolase domain N16961_VC00444 PF00117 Glutamine amidotransferase class-I N16961_VC00444 PF06418 CTP synthase N-terminus N16961_VC00445 PF00113 Enolase, C-terminal TIM barrel domain N16961_VC00445 PF03952 Enolase, N-terminal domain N16961_VC00446 PF01743 Poly A polymerase head domain N16961_VC00446 PF01966 HD domain N16961_VC00446 PF12627 Probable RNA and SrmB- binding site of polymerase A N16961_VC00447 PF01471 Putative peptidoglycan binding domain N16961_VC00447 PF13401 AAA domain N16961_VC00448 PF16537 N16961_VC00448 N16961_VC00449 PF08239 Bacterial SH3 domain N16961_VC00450 PF01384 N16961_VC00450 N16961_VC00451 PF01865 Protein of unknown function DUF47 N16961_VC00452 PF01928 CYTH domain N16961_VC00452 PF05235 CHAD domain N16961_VC00454 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00455 PF03710 Glutamate-ammonia ligase adenylyltransferase N16961_VC00455 PF08335 GlnD PII-uridylyltransferase N16961_VC00456 PF00294 pfkB family carbohydrate kinase N16961_VC00456 PF01467 Cytidylyltransferase N16961_VC00457 PF02321 Outer membrane efflux protein N16961_VC00458 PF00293 NUDIX domain N16961_VC00459 PF06853 N16961_VC00459 N16961_VC00460 PF00149 Calcineurin-like phosphoesterase N16961_VC00461 PF05728 Uncharacterised protein family (UPF0227) N16961_VC00462 PF00204 DNA gyrase B N16961_VC00462 PF00986 DNA gyrase B subunit, carboxyl terminus N16961_VC00462 PF01751 Toprim domain N16961_VC00462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00463 PF00521 DNA gyrase/topoisomerase IV, subunit A N16961_VC00463 PF03989 DNA gyrase C-terminal domain, beta-propeller N16961_VC00464 PF03884 Domain of unknown function (DUF329) N16961_VC00465 PF07072 Protein of unknown function (DUF1342) N16961_VC00466 PF01121 Dephospho-CoA kinase N16961_VC00467 PF01478 Type IV leader peptidase family N16961_VC00467 PF06750 N16961_VC00467 N16961_VC00468 PF00482 Type II secretion system (T2SS), protein F N16961_VC00469 PF00437 Type II/IV secretion system protein N16961_VC00469 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N16961_VC00470 PF00114 Pilin (bacterial filament) N16961_VC00470 PF07963 Prokaryotic N-terminal methylation motif N16961_VC00471 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N16961_VC00471 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N16961_VC00472 PF01510 N-acetylmuramoyl-L-alanine amidase N16961_VC00473 PF00258 Flavodoxin N16961_VC00474 PF00589 Phage integrase family N16961_VC00474 PF02899 Phage integrase, N-terminal SAM-like domain N16961_VC00475 PF10411 Disulfide bond isomerase protein N-terminus N16961_VC00475 PF13098 Thioredoxin-like domain N16961_VC00476 PF01368 DHH family N16961_VC00476 PF02272 DHHA1 domain N16961_VC00477 PF00149 Calcineurin-like phosphoesterase N16961_VC00477 PF02872 5'-nucleotidase, C-terminal domain N16961_VC00478 PF00392 Bacterial regulatory proteins, gntR family N16961_VC00478 PF07729 FCD domain N16961_VC00479 PF00456 Transketolase, thiamine diphosphate binding domain N16961_VC00480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N16961_VC00480 PF00364 Biotin-requiring enzyme N16961_VC00480 PF02817 e3 binding domain N16961_VC00481 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VC00481 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00485 PF01795 MraW methylase family N16961_VC00486 PF04999 N16961_VC00486 N16961_VC00487 PF00905 Penicillin binding protein transpeptidase domain N16961_VC00487 PF03717 Penicillin-binding Protein dimerisation domain N16961_VC00488 PF01225 Mur ligase family, catalytic domain N16961_VC00488 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00488 PF08245 Mur ligase middle domain N16961_VC00489 PF01225 Mur ligase family, catalytic domain N16961_VC00489 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00489 PF08245 Mur ligase middle domain N16961_VC00490 PF00953 Glycosyl transferase family 4 N16961_VC00490 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N16961_VC00491 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00491 PF08245 Mur ligase middle domain N16961_VC00492 PF01098 N16961_VC00492 N16961_VC00493 PF03033 Glycosyltransferase family 28 N-terminal domain N16961_VC00493 PF04101 Glycosyltransferase family 28 C-terminal domain N16961_VC00494 PF01225 Mur ligase family, catalytic domain N16961_VC00494 PF02875 Mur ligase family, glutamate ligase domain N16961_VC00494 PF08245 Mur ligase middle domain N16961_VC00495 PF03799 Cell division protein FtsQ N16961_VC00495 PF08478 POTRA domain, FtsQ-type N16961_VC00496 PF02491 SHS2 domain inserted in FTSA N16961_VC00496 PF14450 Cell division protein FtsA N16961_VC00497 PF00091 Tubulin/FtsZ family, GTPase domain N16961_VC00497 PF12327 FtsZ family, C-terminal domain N16961_VC00498 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N16961_VC00499 PF05258 N16961_VC00499 N16961_VC00500 PF01043 SecA preprotein cross-linking domain N16961_VC00500 PF02810 SEC-C motif N16961_VC00500 PF07516 SecA Wing and Scaffold domain N16961_VC00500 PF07517 SecA DEAD-like domain N16961_VC00501 PF00293 NUDIX domain N16961_VC00502 PF01113 Dihydrodipicolinate reductase, N-terminus N16961_VC00502 PF05173 Dihydrodipicolinate reductase, C-terminus N16961_VC00503 PF00117 Glutamine amidotransferase class-I N16961_VC00503 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N16961_VC00504 PF02142 MGS-like domain N16961_VC00504 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N16961_VC00504 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N16961_VC00508 PF13304 AAA domain N16961_VC00509 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N16961_VC00512 PF01925 N16961_VC00512 N16961_VC00513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00513 PF03466 LysR substrate binding domain N16961_VC00514 PF03458 N16961_VC00514 N16961_VC00515 PF01497 Periplasmic binding protein N16961_VC00516 PF03186 N16961_VC00516 N16961_VC00517 PF01048 Phosphorylase superfamily N16961_VC00518 PF07386 N16961_VC00518 N16961_VC00519 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00519 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N16961_VC00520 PF00310 Glutamine amidotransferases class-II N16961_VC00520 PF01493 GXGXG motif N16961_VC00520 PF01645 Conserved region in glutamate synthase N16961_VC00520 PF04898 Glutamate synthase central domain N16961_VC00521 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00521 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N16961_VC00522 PF00310 Glutamine amidotransferases class-II N16961_VC00522 PF01493 GXGXG motif N16961_VC00522 PF01645 Conserved region in glutamate synthase N16961_VC00522 PF04898 Glutamate synthase central domain N16961_VC00523 PF04055 Radical SAM superfamily N16961_VC00523 PF16199 N16961_VC00523 N16961_VC00524 PF00990 GGDEF domain N16961_VC00524 PF08448 PAS fold N16961_VC00524 PF13188 PAS domain N16961_VC00525 PF00072 Response regulator receiver domain N16961_VC00525 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00525 PF00989 PAS fold N16961_VC00525 PF01627 Hpt domain N16961_VC00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00526 PF00072 Response regulator receiver domain N16961_VC00526 PF00486 Transcriptional regulatory protein, C terminal N16961_VC00527 PF11697 N16961_VC00527 N16961_VC00528 PF03737 Demethylmenaquinone methyltransferase N16961_VC00531 PF00696 Amino acid kinase family N16961_VC00531 PF00742 Homoserine dehydrogenase N16961_VC00531 PF01842 ACT domain N16961_VC00531 PF03447 Homoserine dehydrogenase, NAD binding domain N16961_VC00531 PF13840 ACT domain N16961_VC00532 PF00288 GHMP kinases N terminal domain N16961_VC00532 PF08544 GHMP kinases C terminal N16961_VC00533 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC00533 PF14821 Threonine synthase N terminus N16961_VC00534 PF01228 Glycine radical N16961_VC00535 PF01261 Xylose isomerase-like TIM barrel N16961_VC00536 PF03167 Uracil DNA glycosylase superfamily N16961_VC00537 PF01814 Hemerythrin HHE cation binding domain N16961_VC00538 PF12065 N16961_VC00538 N16961_VC00539 PF01235 N16961_VC00539 N16961_VC00540 PF03883 N16961_VC00540 N16961_VC00541 PF17320 N16961_VC00541 N16961_VC00542 PF01026 TatD related DNase N16961_VC00543 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_VC00543 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_VC00543 PF07670 Nucleoside recognition N16961_VC00544 PF01791 DeoC/LacD family aldolase N16961_VC00545 PF00591 Glycosyl transferase family, a/b domain N16961_VC00545 PF02885 Glycosyl transferase family, helical bundle domain N16961_VC00545 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N16961_VC00546 PF01676 Metalloenzyme superfamily N16961_VC00547 PF01048 Phosphorylase superfamily N16961_VC00548 PF10144 N16961_VC00548 N16961_VC00549 PF00702 haloacid dehalogenase-like hydrolase N16961_VC00550 PF07238 PilZ domain N16961_VC00551 PF13481 AAA domain N16961_VC00551 PF13541 Subunit ChlI of Mg-chelatase N16961_VC00552 PF00009 Elongation factor Tu GTP binding domain N16961_VC00552 PF00679 Elongation factor G C-terminus N16961_VC00552 PF03144 Elongation factor Tu domain 2 N16961_VC00552 PF03764 Elongation factor G, domain IV N16961_VC00552 PF14492 Elongation Factor G, domain II N16961_VC00553 PF00501 AMP-binding enzyme N16961_VC00554 PF13487 HD domain N16961_VC00555 PF02417 N16961_VC00555 N16961_VC00556 PF00703 Glycosyl hydrolases family 2 N16961_VC00556 PF02836 Glycosyl hydrolases family 2, TIM barrel domain N16961_VC00556 PF02837 Glycosyl hydrolases family 2, sugar binding domain N16961_VC00556 PF02929 Beta galactosidase small chain N16961_VC00556 PF16353 N16961_VC00556 N16961_VC00557 PF00356 Bacterial regulatory proteins, lacI family N16961_VC00557 PF13377 Periplasmic binding protein-like domain N16961_VC00558 PF01588 Putative tRNA binding domain N16961_VC00559 PF06094 AIG2-like family N16961_VC00560 PF01544 CorA-like Mg2+ transporter protein N16961_VC00561 PF08443 RimK-like ATP-grasp domain N16961_VC00561 PF14401 N16961_VC00561 N16961_VC00563 PF00583 Acetyltransferase (GNAT) family N16961_VC00563 PF11814 N16961_VC00563 N16961_VC00564 PF05940 N16961_VC00564 N16961_VC00565 PF14602 Hexapeptide repeat of succinyl-transferase N16961_VC00565 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle N16961_VC00565 PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal N16961_VC00566 PF07130 YebG protein N16961_VC00567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00567 PF03466 LysR substrate binding domain N16961_VC00568 PF03595 Voltage-dependent anion channel N16961_VC00569 PF04257 Exodeoxyribonuclease V, gamma subunit N16961_VC00570 PF00580 UvrD/REP helicase N-terminal domain N16961_VC00570 PF12705 PD-(D/E)XK nuclease superfamily N16961_VC00570 PF13361 UvrD-like helicase C-terminal domain N16961_VC00571 PF13538 UvrD-like helicase C-terminal domain N16961_VC00571 PF13604 AAA domain N16961_VC00573 PF00583 Acetyltransferase (GNAT) family N16961_VC00573 PF00696 Amino acid kinase family N16961_VC00574 PF11012 N16961_VC00574 N16961_VC00575 PF03562 MltA specific insert domain N16961_VC00575 PF06725 3D domain N16961_VC00576 PF00899 ThiF family N16961_VC00577 PF02657 Fe-S metabolism associated domain N16961_VC00578 PF00266 Aminotransferase class-V N16961_VC00579 PF01965 DJ-1/PfpI family N16961_VC00580 PF02558 Ketopantoate reductase PanE/ApbA N16961_VC00580 PF08546 Ketopantoate reductase PanE/ApbA C terminal N16961_VC00581 PF03502 Nucleoside-specific channel-forming protein, Tsx N16961_VC00582 PF02190 ATP-dependent protease La (LON) domain N16961_VC00583 PF04542 Sigma-70 region 2 N16961_VC00583 PF04545 Sigma-70, region 4 N16961_VC00584 PF12973 ChrR Cupin-like domain N16961_VC00584 PF13490 Putative zinc-finger N16961_VC00585 PF07690 Major Facilitator Superfamily N16961_VC00586 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N16961_VC00587 PF03923 N16961_VC00587 N16961_VC00588 PF05175 Methyltransferase small domain N16961_VC00589 PF01722 BolA-like protein N16961_VC00590 PF05896 N16961_VC00590 N16961_VC00590 PF11973 N16961_VC00590 N16961_VC00591 PF03116 N16961_VC00591 N16961_VC00592 PF04205 FMN-binding domain N16961_VC00593 PF02508 N16961_VC00593 N16961_VC00594 PF02508 N16961_VC00594 N16961_VC00595 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VC00595 PF00175 Oxidoreductase NAD-binding domain N16961_VC00595 PF00970 Oxidoreductase FAD-binding domain N16961_VC00596 PF02424 ApbE family N16961_VC00597 PF04400 N16961_VC00597 N16961_VC00598 PF00817 impB/mucB/samB family N16961_VC00598 PF11798 IMS family HHH motif N16961_VC00598 PF11799 impB/mucB/samB family C-terminal domain N16961_VC00599 PF11101 N16961_VC00599 N16961_VC00600 PF00990 GGDEF domain N16961_VC00600 PF05228 N16961_VC00600 N16961_VC00601 PF00209 Sodium:neurotransmitter symporter family N16961_VC00602 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N16961_VC00603 PF08443 RimK-like ATP-grasp domain N16961_VC00604 PF05618 Putative ATP-dependant zinc protease N16961_VC00605 PF01546 Peptidase family M20/M25/M40 N16961_VC00605 PF07687 Peptidase dimerisation domain N16961_VC00606 PF00860 Permease family N16961_VC00607 PF00156 Phosphoribosyl transferase domain N16961_VC00608 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) N16961_VC00609 PF07417 Transcriptional regulator Crl N16961_VC00610 PF00696 Amino acid kinase family N16961_VC00610 PF01472 PUA domain N16961_VC00611 PF00171 Aldehyde dehydrogenase family N16961_VC00612 PF03477 ATP cone domain N16961_VC00613 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VC00613 PF01872 RibD C-terminal domain N16961_VC00614 PF00677 Lumazine binding domain N16961_VC00615 PF00925 GTP cyclohydrolase II N16961_VC00615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N16961_VC00616 PF00885 6,7-dimethyl-8-ribityllumazine synthase N16961_VC00617 PF01029 NusB family N16961_VC00618 PF00586 AIR synthase related protein, N-terminal domain N16961_VC00618 PF02769 AIR synthase related protein, C-terminal domain N16961_VC00619 PF04608 Phosphatidylglycerophosphatase A N16961_VC00620 PF11944 N16961_VC00620 N16961_VC00621 PF01909 Nucleotidyltransferase domain N16961_VC00621 PF01966 HD domain N16961_VC00621 PF08335 GlnD PII-uridylyltransferase N16961_VC00622 PF00557 Metallopeptidase family M24 N16961_VC00624 PF00318 Ribosomal protein S2 N16961_VC00625 PF00889 Elongation factor TS N16961_VC00626 PF00696 Amino acid kinase family N16961_VC00627 PF01765 Ribosome recycling factor N16961_VC00628 PF01255 Putative undecaprenyl diphosphate synthase N16961_VC00629 PF01148 Cytidylyltransferase family N16961_VC00630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N16961_VC00630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal N16961_VC00630 PF13288 DXP reductoisomerase C-terminal domain N16961_VC00631 PF00595 PDZ domain (Also known as DHR or GLGF) N16961_VC00631 PF02163 Peptidase family M50 N16961_VC00632 PF01103 Surface antigen N16961_VC00632 PF07244 Surface antigen variable number repeat N16961_VC00633 PF03938 Outer membrane protein (OmpH-like) N16961_VC00634 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC00634 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N16961_VC00634 PF14602 Hexapeptide repeat of succinyl-transferase N16961_VC00635 PF07977 FabA-like domain N16961_VC00636 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC00636 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N16961_VC00637 PF02684 N16961_VC00637 N16961_VC00638 PF01351 Ribonuclease HII N16961_VC00639 PF01336 OB-fold nucleic acid binding domain N16961_VC00639 PF02811 PHP domain N16961_VC00639 PF07733 Bacterial DNA polymerase III alpha subunit N16961_VC00639 PF14579 Helix-hairpin-helix motif N16961_VC00640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N16961_VC00641 PF01171 PP-loop family N16961_VC00641 PF09179 TilS substrate binding domain N16961_VC00641 PF11734 TilS substrate C-terminal domain N16961_VC00642 PF00034 Cytochrome c N16961_VC00643 PF05870 Phenolic acid decarboxylase (PAD) N16961_VC00644 PF00543 Nitrogen regulatory protein P-II N16961_VC00645 PF03372 Endonuclease/Exonuclease/phosphatase family N16961_VC00646 PF01464 Transglycosylase SLT domain N16961_VC00646 PF01476 LysM domain N16961_VC00647 PF00753 Metallo-beta-lactamase superfamily N16961_VC00647 PF16123 N16961_VC00647 N16961_VC00648 PF08241 Methyltransferase domain N16961_VC00649 PF00075 RNase H N16961_VC00650 PF00929 Exonuclease N16961_VC00652 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N16961_VC00652 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N16961_VC00652 PF09317 N16961_VC00652 N16961_VC00653 PF13580 SIS domain N16961_VC00654 PF13230 Glutamine amidotransferases class-II N16961_VC00655 PF00551 Formyl transferase N16961_VC00656 PF00586 AIR synthase related protein, N-terminal domain N16961_VC00656 PF02769 AIR synthase related protein, C-terminal domain N16961_VC00657 PF14681 Uracil phosphoribosyltransferase N16961_VC00659 PF00990 GGDEF domain N16961_VC00659 PF02743 Cache domain N16961_VC00660 PF00849 RNA pseudouridylate synthase N16961_VC00660 PF01479 S4 domain N16961_VC00661 PF01713 Smr domain N16961_VC00662 PF11346 N16961_VC00662 N16961_VC00664 PF01963 N16961_VC00664 N16961_VC00665 PF00728 Glycosyl hydrolase family 20, catalytic domain N16961_VC00665 PF02838 Glycosyl hydrolase family 20, domain 2 N16961_VC00665 PF03173 Putative carbohydrate binding domain N16961_VC00665 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain N16961_VC00666 PF04214 N16961_VC00666 N16961_VC00667 PF00122 E1-E2 ATPase N16961_VC00667 PF00403 Heavy-metal-associated domain N16961_VC00667 PF00702 haloacid dehalogenase-like hydrolase N16961_VC00668 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_VC00669 PF00691 OmpA family N16961_VC00669 PF01389 OmpA-like transmembrane domain N16961_VC00671 PF07715 TonB-dependent Receptor Plug Domain N16961_VC00672 PF04954 Siderophore-interacting protein N16961_VC00672 PF08021 Siderophore-interacting FAD-binding domain N16961_VC00673 PF00501 AMP-binding enzyme N16961_VC00673 PF00550 Phosphopantetheine attachment site N16961_VC00673 PF00668 Condensation domain N16961_VC00673 PF13193 AMP-binding enzyme C-terminal domain N16961_VC00674 PF16538 N16961_VC00674 N16961_VC00674 PF16539 N16961_VC00674 N16961_VC00674 PF16548 N16961_VC00674 N16961_VC00676 PF02169 LPP20 lipoprotein N16961_VC00677 PF05130 FlgN protein N16961_VC00678 PF04316 Anti-sigma-28 factor, FlgM N16961_VC00679 PF13144 SAF-like N16961_VC00680 PF00072 Response regulator receiver domain N16961_VC00680 PF01584 CheW-like domain N16961_VC00681 PF01739 CheR methyltransferase, SAM binding domain N16961_VC00681 PF03705 CheR methyltransferase, all-alpha domain N16961_VC00683 PF00460 Flagella basal body rod protein N16961_VC00683 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00684 PF03963 N16961_VC00684 N16961_VC00684 PF13860 FlgD Ig-like domain N16961_VC00684 PF13861 FlgD Tudor-like domain N16961_VC00685 PF00460 Flagella basal body rod protein N16961_VC00685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00685 PF07559 Flagellar basal body protein FlaE N16961_VC00686 PF00460 Flagella basal body rod protein N16961_VC00686 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00687 PF00460 Flagella basal body rod protein N16961_VC00687 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00688 PF02107 N16961_VC00688 N16961_VC00689 PF02119 N16961_VC00689 N16961_VC00690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase N16961_VC00690 PF10135 N16961_VC00690 N16961_VC00691 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_VC00692 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00692 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00693 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00693 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00693 PF07196 Flagellin hook IN motif N16961_VC00694 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00694 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00694 PF07196 Flagellin hook IN motif N16961_VC00711 PF01926 50S ribosome-binding GTPase N16961_VC00711 PF06071 Protein of unknown function (DUF933) N16961_VC00712 PF01195 Peptidyl-tRNA hydrolase N16961_VC00713 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N16961_VC00713 PF14572 Phosphoribosyl synthetase-associated domain N16961_VC00714 PF00288 GHMP kinases N terminal domain N16961_VC00714 PF08544 GHMP kinases C terminal N16961_VC00715 PF03550 Outer membrane lipoprotein LolB N16961_VC00716 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N16961_VC00716 PF01488 Shikimate / quinate 5-dehydrogenase N16961_VC00716 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N16961_VC00717 PF00472 RF-1 domain N16961_VC00717 PF03462 PCRF domain N16961_VC00718 PF13847 Methyltransferase domain N16961_VC00719 PF04247 N16961_VC00719 N16961_VC00720 PF13369 N16961_VC00720 N16961_VC00720 PF13371 Tetratricopeptide repeat N16961_VC00721 PF00793 DAHP synthetase I family N16961_VC00722 PF00149 Calcineurin-like phosphoesterase N16961_VC00722 PF02872 5'-nucleotidase, C-terminal domain N16961_VC00723 PF04073 Aminoacyl-tRNA editing domain N16961_VC00724 PF00860 Permease family N16961_VC00725 PF09839 N16961_VC00725 N16961_VC00726 PF09842 N16961_VC00726 N16961_VC00727 PF03358 NADPH-dependent FMN reductase N16961_VC00728 PF03960 ArsC family N16961_VC00729 PF01435 Peptidase family M48 N16961_VC00729 PF13181 Tetratricopeptide repeat N16961_VC00729 PF14559 Tetratricopeptide repeat N16961_VC00730 PF01206 Sulfurtransferase TusA N16961_VC00731 PF01594 N16961_VC00731 N16961_VC00732 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00732 PF02743 Cache domain N16961_VC00733 PF00578 AhpC/TSA family N16961_VC00734 PF13740 ACT domain N16961_VC00735 PF00701 Dihydrodipicolinate synthetase family N16961_VC00736 PF06804 NlpB/DapX lipoprotein N16961_VC00737 PF11446 N16961_VC00737 N16961_VC00738 PF02557 D-alanyl-D-alanine carboxypeptidase N16961_VC00739 PF01546 Peptidase family M20/M25/M40 N16961_VC00739 PF07687 Peptidase dimerisation domain N16961_VC00740 PF03960 ArsC family N16961_VC00741 PF09904 Winged helix-turn helix N16961_VC00742 PF11169 N16961_VC00742 N16961_VC00743 PF11143 N16961_VC00743 N16961_VC00744 PF04261 Dyp-type peroxidase family N16961_VC00745 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00745 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00745 PF07196 Flagellin hook IN motif N16961_VC00746 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00746 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00746 PF07196 Flagellin hook IN motif N16961_VC00747 PF00669 Bacterial flagellin N-terminal helical region N16961_VC00747 PF00700 Bacterial flagellin C-terminal helical region N16961_VC00747 PF07196 Flagellin hook IN motif N16961_VC00748 PF03646 FlaG protein N16961_VC00749 PF02465 N16961_VC00749 N16961_VC00749 PF07195 N16961_VC00749 N16961_VC00749 PF07196 Flagellin hook IN motif N16961_VC00751 PF02561 Flagellar protein FliS N16961_VC00752 PF00158 Sigma-54 interaction domain N16961_VC00752 PF02954 Bacterial regulatory protein, Fis family N16961_VC00752 PF06490 N16961_VC00752 N16961_VC00753 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00753 PF13188 PAS domain N16961_VC00754 PF00072 Response regulator receiver domain N16961_VC00754 PF00158 Sigma-54 interaction domain N16961_VC00754 PF02954 Bacterial regulatory protein, Fis family N16961_VC00755 PF02049 N16961_VC00755 N16961_VC00756 PF01514 Secretory protein of YscJ/FliF family N16961_VC00756 PF08345 N16961_VC00756 N16961_VC00757 PF01706 FliG C-terminal domain N16961_VC00757 PF14841 FliG middle domain N16961_VC00757 PF14842 FliG N-terminal domain N16961_VC00758 PF02108 N16961_VC00758 N16961_VC00759 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_VC00760 PF02050 Flagellar FliJ protein N16961_VC00761 PF02120 Flagellar hook-length control protein FliK N16961_VC00762 PF03748 N16961_VC00762 N16961_VC00763 PF01052 Surface presentation of antigens (SPOA) N16961_VC00763 PF02154 Flagellar motor switch protein FliM N16961_VC00764 PF01052 Surface presentation of antigens (SPOA) N16961_VC00765 PF04347 N16961_VC00765 N16961_VC00766 PF00813 N16961_VC00766 N16961_VC00767 PF01313 N16961_VC00767 N16961_VC00768 PF01311 N16961_VC00768 N16961_VC00769 PF01312 FlhB HrpN YscU SpaS Family N16961_VC00770 PF01713 Smr domain N16961_VC00771 PF05175 Methyltransferase small domain N16961_VC00772 PF01264 Chorismate synthase N16961_VC00773 PF03458 N16961_VC00773 N16961_VC00774 PF04315 N16961_VC00774 N16961_VC00775 PF08891 N16961_VC00775 N16961_VC00776 PF03358 NADPH-dependent FMN reductase N16961_VC00777 PF01266 FAD dependent oxidoreductase N16961_VC00777 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N16961_VC00778 PF00109 Beta-ketoacyl synthase, N-terminal domain N16961_VC00778 PF02801 Beta-ketoacyl synthase, C-terminal domain N16961_VC00779 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VC00779 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VC00779 PF11890 Domain of unknown function (DUF3410) N16961_VC00780 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_VC00780 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_VC00781 PF01475 Ferric uptake regulator family N16961_VC00782 PF14539 Domain of unknown function (DUF4442) N16961_VC00783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00783 PF03466 LysR substrate binding domain N16961_VC00784 PF03788 N16961_VC00784 N16961_VC00785 PF04172 N16961_VC00785 N16961_VC00786 PF00258 Flavodoxin N16961_VC00787 PF10981 N16961_VC00787 N16961_VC00788 PF00561 alpha/beta hydrolase fold N16961_VC00789 PF03925 SeqA protein N16961_VC00789 PF17206 N16961_VC00789 N16961_VC00790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VC00790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VC00790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VC00790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VC00791 PF08907 N16961_VC00791 N16961_VC00792 PF01784 NIF3 (NGG1p interacting factor 3) N16961_VC00793 PF00285 Citrate synthase N16961_VC00794 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N16961_VC00795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N16961_VC00796 PF00890 FAD binding domain N16961_VC00796 PF02910 Fumarate reductase flavoprotein C-term N16961_VC00797 PF13085 2Fe-2S iron-sulfur cluster binding domain N16961_VC00797 PF13534 4Fe-4S dicluster domain N16961_VC00798 PF00676 Dehydrogenase E1 component N16961_VC00798 PF02779 Transketolase, pyrimidine binding domain N16961_VC00798 PF16078 N16961_VC00798 N16961_VC00798 PF16870 N16961_VC00798 N16961_VC00799 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N16961_VC00799 PF00364 Biotin-requiring enzyme N16961_VC00799 PF02817 e3 binding domain N16961_VC00800 PF00549 CoA-ligase N16961_VC00800 PF08442 ATP-grasp domain N16961_VC00801 PF00549 CoA-ligase N16961_VC00801 PF02629 CoA binding domain N16961_VC00802 PF00950 N16961_VC00802 N16961_VC00803 PF00005 ABC transporter N16961_VC00804 PF01297 Periplasmic solute binding protein family N16961_VC00805 PF12833 Helix-turn-helix domain N16961_VC00807 PF04023 FeoA domain N16961_VC00808 PF02421 Ferrous iron transport protein B N16961_VC00808 PF07664 N16961_VC00808 N16961_VC00808 PF07670 Nucleoside recognition N16961_VC00809 PF09012 FeoC like transcriptional regulator N16961_VC00810 PF01230 HIT domain N16961_VC00811 PF00750 tRNA synthetases class I (R) N16961_VC00811 PF03485 Arginyl tRNA synthetase N terminal domain N16961_VC00811 PF05746 DALR anticodon binding domain N16961_VC00812 PF06185 YecM protein N16961_VC00813 PF00675 Insulinase (Peptidase family M16) N16961_VC00813 PF05193 Peptidase M16 inactive domain N16961_VC00813 PF16187 N16961_VC00813 N16961_VC00814 PF00300 Histidine phosphatase superfamily (branch 1) N16961_VC00815 PF00771 FHIPEP family N16961_VC00816 PF00448 SRP54-type protein, GTPase domain N16961_VC00817 PF10609 ParA/MinD ATPase like N16961_VC00818 PF04539 Sigma-70 region 3 N16961_VC00818 PF04542 Sigma-70 region 2 N16961_VC00818 PF04545 Sigma-70, region 4 N16961_VC00819 PF00072 Response regulator receiver domain N16961_VC00820 PF04344 Chemotaxis phosphatase, CheZ N16961_VC00821 PF01584 CheW-like domain N16961_VC00821 PF01627 Hpt domain N16961_VC00821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00821 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_VC00822 PF00072 Response regulator receiver domain N16961_VC00822 PF01339 CheB methylesterase N16961_VC00823 PF13614 AAA domain N16961_VC00824 PF01584 CheW-like domain N16961_VC00825 PF01584 CheW-like domain N16961_VC00826 PF10975 N16961_VC00826 N16961_VC00827 PF00005 ABC transporter N16961_VC00828 PF03379 N16961_VC00828 N16961_VC00829 PF01578 N16961_VC00829 N16961_VC00830 PF04995 N16961_VC00830 N16961_VC00831 PF03100 CcmE N16961_VC00832 PF01578 N16961_VC00832 N16961_VC00832 PF16327 N16961_VC00832 N16961_VC00833 PF08534 Redoxin N16961_VC00834 PF03918 Cytochrome C biogenesis protein N16961_VC00835 PF14559 Tetratricopeptide repeat N16961_VC00836 PF04333 N16961_VC00836 N16961_VC00837 PF00106 short chain dehydrogenase N16961_VC00838 PF11993 N16961_VC00838 N16961_VC00839 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N16961_VC00839 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N16961_VC00840 PF00462 Glutaredoxin N16961_VC00841 PF01131 DNA topoisomerase N16961_VC00841 PF01751 Toprim domain N16961_VC00842 PF00850 Histone deacetylase domain N16961_VC00845 PF00884 Sulfatase N16961_VC00845 PF11893 N16961_VC00845 N16961_VC00846 PF07208 Protein of unknown function (DUF1414) N16961_VC00847 PF04245 N16961_VC00847 N16961_VC00848 PF01627 Hpt domain N16961_VC00849 PF03553 N16961_VC00849 N16961_VC00850 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_VC00850 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_VC00851 PF01914 N16961_VC00851 N16961_VC00852 PF00171 Aldehyde dehydrogenase family N16961_VC00852 PF00465 Iron-containing alcohol dehydrogenase N16961_VC00854 PF00916 N16961_VC00854 N16961_VC00854 PF01740 STAS domain N16961_VC00855 PF00575 S1 RNA binding domain N16961_VC00855 PF10150 Ribonuclease E/G family N16961_VC00856 PF00849 RNA pseudouridylate synthase N16961_VC00856 PF01479 S4 domain N16961_VC00857 PF02545 Maf-like protein N16961_VC00858 PF02620 N16961_VC00858 N16961_VC00859 PF01783 Ribosomal L32p protein family N16961_VC00860 PF02504 Fatty acid synthesis protein N16961_VC00861 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N16961_VC00861 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N16961_VC00862 PF00698 Acyl transferase domain N16961_VC00863 PF13561 Enoyl-(Acyl carrier protein) reductase N16961_VC00864 PF00550 Phosphopantetheine attachment site N16961_VC00865 PF00109 Beta-ketoacyl synthase, N-terminal domain N16961_VC00865 PF02801 Beta-ketoacyl synthase, C-terminal domain N16961_VC00866 PF01063 Aminotransferase class IV N16961_VC00867 PF02618 YceG-like family N16961_VC00868 PF02223 Thymidylate kinase N16961_VC00869 PF09115 DNA polymerase III, delta subunit, C terminal N16961_VC00869 PF13177 DNA polymerase III, delta subunit N16961_VC00870 PF01026 TatD related DNase N16961_VC00871 PF00367 phosphotransferase system, EIIB N16961_VC00871 PF02378 Phosphotransferase system, EIIC N16961_VC00873 PF00209 Sodium:neurotransmitter symporter family N16961_VC00876 PF01734 Patatin-like phospholipase N16961_VC00877 PF00224 Pyruvate kinase, barrel domain N16961_VC00877 PF02887 Pyruvate kinase, alpha/beta domain N16961_VC00878 PF00480 ROK family N16961_VC00879 PF00072 Response regulator receiver domain N16961_VC00879 PF01584 CheW-like domain N16961_VC00881 PF04187 Protein of unknown function, DUF399 N16961_VC00882 PF13847 Methyltransferase domain N16961_VC00883 PF11059 N16961_VC00883 N16961_VC00884 PF01263 Aldose 1-epimerase N16961_VC00885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_VC00885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_VC00886 PF01641 SelR domain N16961_VC00887 PF11207 N16961_VC00887 N16961_VC00888 PF07023 N16961_VC00888 N16961_VC00889 PF00710 Asparaginase N16961_VC00890 PF01343 Peptidase family S49 N16961_VC00891 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_VC00891 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00892 PF00551 Formyl transferase N16961_VC00892 PF01842 ACT domain N16961_VC00894 PF13307 Helicase C-terminal domain N16961_VC00895 PF00814 Glycoprotease family N16961_VC00897 PF03843 N16961_VC00897 N16961_VC00898 PF12697 Alpha/beta hydrolase family N16961_VC00899 PF00501 AMP-binding enzyme N16961_VC00899 PF13193 AMP-binding enzyme C-terminal domain N16961_VC00900 PF00570 HRDC domain N16961_VC00900 PF01612 3'-5' exonuclease N16961_VC00901 PF01432 Peptidase family M3 N16961_VC00902 PF01694 Rhomboid family N16961_VC00903 PF03942 N16961_VC00903 N16961_VC00904 PF01966 HD domain N16961_VC00904 PF13286 Phosphohydrolase-associated domain N16961_VC00905 PF13023 HD domain N16961_VC00906 PF00155 Aminotransferase class I and II N16961_VC00907 PF00425 chorismate binding enzyme N16961_VC00908 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VC00908 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_VC00908 PF16582 N16961_VC00908 N16961_VC00909 PF12697 Alpha/beta hydrolase family N16961_VC00910 PF00378 Enoyl-CoA hydratase/isomerase family N16961_VC00911 PF13378 Enolase C-terminal domain-like N16961_VC00912 PF00501 AMP-binding enzyme N16961_VC00913 PF03594 N16961_VC00913 N16961_VC00914 PF01381 Helix-turn-helix N16961_VC00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00915 PF00672 HAMP domain N16961_VC00916 PF01553 Acyltransferase N16961_VC00916 PF07690 Major Facilitator Superfamily N16961_VC00917 PF13305 WHG domain N16961_VC00919 PF04280 Tim44-like domain N16961_VC00919 PF07466 N16961_VC00919 N16961_VC00920 PF06844 Protein of unknown function (DUF1244) N16961_VC00921 PF04170 NlpE N-terminal domain N16961_VC00922 PF03776 Septum formation topological specificity factor MinE N16961_VC00923 PF13614 AAA domain N16961_VC00924 PF03775 Septum formation inhibitor MinC, C-terminal domain N16961_VC00924 PF05209 Septum formation inhibitor MinC, N-terminal domain N16961_VC00925 PF05166 YcgL domain N16961_VC00926 PF13406 Transglycosylase SLT domain N16961_VC00927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00927 PF03466 LysR substrate binding domain N16961_VC00928 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_VC00928 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_VC00928 PF07670 Nucleoside recognition N16961_VC00929 PF00704 Glycosyl hydrolases family 18 N16961_VC00930 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_VC00931 PF00384 Molybdopterin oxidoreductase N16961_VC00931 PF01568 Molydopterin dinucleotide binding domain N16961_VC00932 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N16961_VC00932 PF05141 Pyoverdine/dityrosine biosynthesis protein N16961_VC00933 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00933 PF03466 LysR substrate binding domain N16961_VC00935 PF01494 FAD binding domain N16961_VC00936 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N16961_VC00937 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N16961_VC00937 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N16961_VC00939 PF10129 N16961_VC00939 N16961_VC00940 PF12710 haloacid dehalogenase-like hydrolase N16961_VC00941 PF01810 N16961_VC00941 N16961_VC00942 PF13279 Thioesterase-like superfamily N16961_VC00943 PF01553 Acyltransferase N16961_VC00944 PF01148 Cytidylyltransferase family N16961_VC00945 PF01066 CDP-alcohol phosphatidyltransferase N16961_VC00946 PF00563 EAL domain N16961_VC00946 PF00990 GGDEF domain N16961_VC00949 PF02696 N16961_VC00949 N16961_VC00950 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_VC00951 PF04290 N16961_VC00951 N16961_VC00952 PF06808 N16961_VC00952 N16961_VC00953 PF00072 Response regulator receiver domain N16961_VC00953 PF00158 Sigma-54 interaction domain N16961_VC00953 PF02954 Bacterial regulatory protein, Fis family N16961_VC00954 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC00954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC00955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC00955 PF05697 Bacterial trigger factor protein (TF) N16961_VC00955 PF05698 Bacterial trigger factor protein (TF) C-terminus N16961_VC00956 PF00574 Clp protease N16961_VC00957 PF06689 ClpX C4-type zinc finger N16961_VC00957 PF07724 AAA domain (Cdc48 subfamily) N16961_VC00957 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VC00958 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC00958 PF02190 ATP-dependent protease La (LON) domain N16961_VC00958 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_VC00959 PF00216 Bacterial DNA-binding protein N16961_VC00961 PF13616 PPIC-type PPIASE domain N16961_VC00961 PF13624 SurA N-terminal domain N16961_VC00962 PF12836 Helix-hairpin-helix motif N16961_VC00963 PF02224 Cytidylate kinase N16961_VC00964 PF00575 S1 RNA binding domain N16961_VC00965 PF00216 Bacterial DNA-binding protein N16961_VC00966 PF06305 N16961_VC00966 N16961_VC00967 PF13176 Tetratricopeptide repeat N16961_VC00968 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N16961_VC00969 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) N16961_VC00971 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC00971 PF03466 LysR substrate binding domain N16961_VC00972 PF13679 N16961_VC00972 N16961_VC00973 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N16961_VC00973 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N16961_VC00974 PF01037 AsnC family N16961_VC00974 PF13412 Winged helix-turn-helix DNA-binding N16961_VC00975 PF01580 FtsK/SpoIIIE family N16961_VC00975 PF09397 Ftsk gamma domain N16961_VC00975 PF13491 N16961_VC00975 N16961_VC00976 PF02600 Disulfide bond formation protein DsbB N16961_VC00977 PF06450 N16961_VC00977 N16961_VC00978 PF00392 Bacterial regulatory proteins, gntR family N16961_VC00978 PF07840 FadR C-terminal domain N16961_VC00979 PF09002 Domain of unknown function (DUF1887) N16961_VC00980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC00981 PF01230 HIT domain N16961_VC00983 PF07233 Protein of unknown function (DUF1425) N16961_VC00984 PF13036 Protein of unknown function (DUF3897) N16961_VC00985 PF01636 Phosphotransferase enzyme family N16961_VC00986 PF05728 Uncharacterised protein family (UPF0227) N16961_VC00987 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC00988 PF13302 Acetyltransferase (GNAT) domain N16961_VC00989 PF16458 N16961_VC00989 N16961_VC00990 PF10972 N16961_VC00990 N16961_VC00991 PF00270 DEAD/DEAH box helicase N16961_VC00991 PF00271 Helicase conserved C-terminal domain N16961_VC00991 PF02559 CarD-like/TRCF domain N16961_VC00991 PF03461 TRCF domain N16961_VC00993 PF02687 N16961_VC00993 N16961_VC00993 PF12704 MacB-like periplasmic core domain N16961_VC00994 PF00005 ABC transporter N16961_VC00995 PF02687 N16961_VC00995 N16961_VC00995 PF12704 MacB-like periplasmic core domain N16961_VC00996 PF09835 N16961_VC00996 N16961_VC00997 PF00753 Metallo-beta-lactamase superfamily N16961_VC00997 PF03772 N16961_VC00997 N16961_VC00997 PF13567 N16961_VC00997 N16961_VC00998 PF00005 ABC transporter N16961_VC00998 PF00664 ABC transporter transmembrane region N16961_VC00999 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N16961_VC01000 PF03966 Trm112p-like protein N16961_VC01001 PF02348 Cytidylyltransferase N16961_VC01002 PF04293 N16961_VC01002 N16961_VC01003 PF04285 N16961_VC01003 N16961_VC01004 PF06798 N16961_VC01004 N16961_VC01004 PF08298 PrkA AAA domain N16961_VC01005 PF03887 YfbU domain N16961_VC01006 PF01891 Cobalt uptake substrate-specific transmembrane region N16961_VC01007 PF04055 Radical SAM superfamily N16961_VC01007 PF13353 4Fe-4S single cluster domain N16961_VC01008 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01009 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) N16961_VC01010 PF01228 Glycine radical N16961_VC01010 PF02901 Pyruvate formate lyase N16961_VC01011 PF11840 N16961_VC01011 N16961_VC01013 PF00005 ABC transporter N16961_VC01014 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01015 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01016 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01017 PF03372 Endonuclease/Exonuclease/phosphatase family N16961_VC01018 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01018 PF00672 HAMP domain N16961_VC01019 PF10689 N16961_VC01019 N16961_VC01020 PF07445 Primosomal replication protein priB and priC N16961_VC01021 PF01925 N16961_VC01021 N16961_VC01022 PF06733 DEAD_2 N16961_VC01022 PF13307 Helicase C-terminal domain N16961_VC01023 PF13609 Gram-negative porin N16961_VC01024 PF09829 N16961_VC01024 N16961_VC01025 PF02810 SEC-C motif N16961_VC01026 PF00563 EAL domain N16961_VC01026 PF08668 HDOD domain N16961_VC01027 PF00149 Calcineurin-like phosphoesterase N16961_VC01028 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N16961_VC01029 PF01406 tRNA synthetases class I (C) catalytic domain N16961_VC01029 PF09190 DALR domain N16961_VC01030 PF02075 Crossover junction endodeoxyribonuclease RuvC N16961_VC01031 PF01330 RuvA N terminal domain N16961_VC01031 PF07499 RuvA, C-terminal domain N16961_VC01031 PF14520 Helix-hairpin-helix domain N16961_VC01032 PF05491 Holliday junction DNA helicase ruvB C-terminus N16961_VC01032 PF05496 Holliday junction DNA helicase ruvB N-terminus N16961_VC01034 PF01654 N16961_VC01034 N16961_VC01035 PF02322 N16961_VC01035 N16961_VC01036 PF08173 N16961_VC01036 N16961_VC01037 PF03061 Thioesterase superfamily N16961_VC01038 PF01618 N16961_VC01038 N16961_VC01039 PF02472 Biopolymer transport protein ExbD/TolR N16961_VC01040 PF06519 TolA C-terminal N16961_VC01041 PF04052 TolB amino-terminal domain N16961_VC01041 PF07676 WD40-like Beta Propeller Repeat N16961_VC01042 PF00691 OmpA family N16961_VC01043 PF13174 Tetratricopeptide repeat N16961_VC01043 PF13432 Tetratricopeptide repeat N16961_VC01043 PF16331 N16961_VC01043 N16961_VC01044 PF02445 Quinolinate synthetase A protein N16961_VC01045 PF03695 Uncharacterised protein family (UPF0149) N16961_VC01046 PF00072 Response regulator receiver domain N16961_VC01046 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01046 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01046 PF02743 Cache domain N16961_VC01047 PF06610 N16961_VC01047 N16961_VC01048 PF01238 Phosphomannose isomerase type I N16961_VC01049 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VC01049 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VC01049 PF02378 Phosphotransferase system, EIIC N16961_VC01050 PF12833 Helix-turn-helix domain N16961_VC01051 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VC01051 PF00381 PTS HPr component phosphorylation site N16961_VC01052 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VC01053 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VC01053 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VC01053 PF02378 Phosphotransferase system, EIIC N16961_VC01054 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VC01055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VC01056 PF00171 Aldehyde dehydrogenase family N16961_VC01057 PF00158 Sigma-54 interaction domain N16961_VC01057 PF01590 GAF domain N16961_VC01057 PF02954 Bacterial regulatory protein, Fis family N16961_VC01058 PF09905 Uncharacterized conserved protein (DUF2132) N16961_VC01059 PF00106 short chain dehydrogenase N16961_VC01060 PF00875 DNA photolyase N16961_VC01060 PF03441 FAD binding domain of DNA photolyase N16961_VC01061 PF04134 N16961_VC01061 N16961_VC01062 PF01936 NYN domain N16961_VC01063 PF11661 N16961_VC01063 N16961_VC01064 PF05930 Prophage CP4-57 regulatory protein (AlpA) N16961_VC01067 PF01926 50S ribosome-binding GTPase N16961_VC01068 PF10980 Protein of unknown function (DUF2787) N16961_VC01072 PF09339 IclR helix-turn-helix domain N16961_VC01074 PF00665 Integrase core domain N16961_VC01075 PF13401 AAA domain N16961_VC01078 PF08765 Mor transcription activator family N16961_VC01079 PF08765 Mor transcription activator family N16961_VC01082 PF10109 N16961_VC01082 N16961_VC01084 PF01527 Transposase N16961_VC01085 PF00665 Integrase core domain N16961_VC01088 PF04002 RadC-like JAB domain N16961_VC01089 PF05930 Prophage CP4-57 regulatory protein (AlpA) N16961_VC01090 PF09264 Vibrio cholerae sialidase, lectin insertion N16961_VC01090 PF13088 BNR repeat-like domain N16961_VC01091 PF01979 Amidohydrolase family N16961_VC01092 PF00480 ROK family N16961_VC01093 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase N16961_VC01094 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_VC01095 PF04290 N16961_VC01095 N16961_VC01096 PF06808 N16961_VC01096 N16961_VC01097 PF00701 Dihydrodipicolinate synthetase family N16961_VC01098 PF01380 SIS domain N16961_VC01098 PF01418 Helix-turn-helix domain, rpiR family N16961_VC01099 PF01344 Kelch motif N16961_VC01100 PF07646 Kelch motif N16961_VC01101 PF13280 N16961_VC01101 N16961_VC01104 PF02384 N-6 DNA Methylase N16961_VC01104 PF12161 HsdM N-terminal domain N16961_VC01105 PF01420 Type I restriction modification DNA specificity domain N16961_VC01106 PF03235 N16961_VC01106 N16961_VC01107 PF03235 N16961_VC01107 N16961_VC01107 PF07510 N16961_VC01107 N16961_VC01108 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N16961_VC01108 PF04851 Type III restriction enzyme, res subunit N16961_VC01110 PF00691 OmpA family N16961_VC01111 PF15611 N16961_VC01111 N16961_VC01112 PF00176 SNF2 family N-terminal domain N16961_VC01112 PF00271 Helicase conserved C-terminal domain N16961_VC01112 PF04471 Restriction endonuclease N16961_VC01113 PF00589 Phage integrase family N16961_VC01114 PF00589 Phage integrase family N16961_VC01114 PF13356 Domain of unknown function (DUF4102) N16961_VC01116 PF00873 AcrB/AcrD/AcrF family N16961_VC01117 PF16576 N16961_VC01117 N16961_VC01118 PF03886 Protein of unknown function (DUF330) N16961_VC01119 PF02470 N16961_VC01119 N16961_VC01120 PF04403 N16961_VC01120 N16961_VC01121 PF00924 Mechanosensitive ion channel N16961_VC01122 PF13265 N16961_VC01122 N16961_VC01123 PF01103 Surface antigen N16961_VC01125 PF00440 Bacterial regulatory proteins, tetR family N16961_VC01125 PF14246 AefR-like transcriptional repressor, C-terminal region N16961_VC01126 PF00171 Aldehyde dehydrogenase family N16961_VC01127 PF07383 N16961_VC01127 N16961_VC01130 PF00440 Bacterial regulatory proteins, tetR family N16961_VC01131 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N16961_VC01131 PF02770 Acyl-CoA dehydrogenase, middle domain N16961_VC01131 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N16961_VC01131 PF09317 N16961_VC01131 N16961_VC01132 PF07055 Enoyl reductase FAD binding domain N16961_VC01132 PF12241 Trans-2-enoyl-CoA reductase catalytic region N16961_VC01132 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N16961_VC01133 PF01176 Translation initiation factor 1A / IF-1 N16961_VC01134 PF04376 N16961_VC01134 N16961_VC01134 PF04377 N16961_VC01134 N16961_VC01135 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N16961_VC01136 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N16961_VC01137 PF10692 Protein of unknown function (DUF2498) N16961_VC01138 PF01131 DNA topoisomerase N16961_VC01138 PF01396 N16961_VC01138 N16961_VC01138 PF01751 Toprim domain N16961_VC01138 PF08272 Topoisomerase I zinc-ribbon-like N16961_VC01139 PF00483 Nucleotidyl transferase N16961_VC01140 PF00534 Glycosyl transferases group 1 N16961_VC01140 PF08323 Starch synthase catalytic domain N16961_VC01141 PF00561 alpha/beta hydrolase fold N16961_VC01142 PF09413 Domain of unknown function (DUF2007) N16961_VC01143 PF09335 N16961_VC01143 N16961_VC01144 PF04993 TfoX N-terminal domain N16961_VC01144 PF04994 TfoX C-terminal domain N16961_VC01146 PF00356 Bacterial regulatory proteins, lacI family N16961_VC01146 PF13377 Periplasmic binding protein-like domain N16961_VC01147 PF02613 Nitrate reductase delta subunit N16961_VC01148 PF00072 Response regulator receiver domain N16961_VC01148 PF00486 Transcriptional regulatory protein, C terminal N16961_VC01149 PF02698 DUF218 domain N16961_VC01150 PF08241 Methyltransferase domain N16961_VC01151 PF03882 KicB killing factor N16961_VC01151 PF17192 N16961_VC01151 N16961_VC01151 PF17193 N16961_VC01151 N16961_VC01152 PF04288 MukE-like family N16961_VC01153 PF04310 MukB N-terminal N16961_VC01153 PF13558 Putative exonuclease SbcCD, C subunit N16961_VC01153 PF16330 N16961_VC01153 N16961_VC01154 PF01037 AsnC family N16961_VC01154 PF13412 Winged helix-turn-helix DNA-binding N16961_VC01155 PF01810 N16961_VC01155 N16961_VC01156 PF04055 Radical SAM superfamily N16961_VC01156 PF08497 N16961_VC01156 N16961_VC01156 PF11842 N16961_VC01156 N16961_VC01157 PF00563 EAL domain N16961_VC01157 PF13426 PAS domain N16961_VC01158 PF00675 Insulinase (Peptidase family M16) N16961_VC01158 PF05193 Peptidase M16 inactive domain N16961_VC01160 PF14056 N16961_VC01160 N16961_VC01161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01161 PF03466 LysR substrate binding domain N16961_VC01162 PF01717 Cobalamin-independent synthase, Catalytic domain N16961_VC01162 PF08267 Cobalamin-independent synthase, N-terminal domain N16961_VC01163 PF16549 N16961_VC01163 N16961_VC01164 PF03795 YCII-related domain N16961_VC01165 PF03061 Thioesterase superfamily N16961_VC01166 PF04279 N16961_VC01166 N16961_VC01168 PF02698 DUF218 domain N16961_VC01169 PF13460 NADH(P)-binding N16961_VC01170 PF06146 N16961_VC01170 N16961_VC01171 PF01226 Formate/nitrite transporter N16961_VC01172 PF06796 N16961_VC01172 N16961_VC01173 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_VC01174 PF00384 Molybdopterin oxidoreductase N16961_VC01174 PF01568 Molydopterin dinucleotide binding domain N16961_VC01175 PF02065 Melibiase N16961_VC01177 PF11449 N16961_VC01177 N16961_VC01178 PF01368 DHH family N16961_VC01178 PF02833 DHHA2 domain N16961_VC01179 PF11042 N16961_VC01179 N16961_VC01180 PF11150 N16961_VC01180 N16961_VC01181 PF00005 ABC transporter N16961_VC01182 PF00005 ABC transporter N16961_VC01182 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC01183 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01183 PF12911 N16961_VC01183 N16961_VC01184 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC01186 PF00158 Sigma-54 interaction domain N16961_VC01186 PF02954 Bacterial regulatory protein, Fis family N16961_VC01187 PF04012 N16961_VC01187 N16961_VC01188 PF06667 N16961_VC01188 N16961_VC01189 PF04024 N16961_VC01189 N16961_VC01190 PF16576 N16961_VC01190 N16961_VC01191 PF13437 HlyD family secretion protein N16961_VC01191 PF13533 Biotin-lipoyl like N16961_VC01192 PF00873 AcrB/AcrD/AcrF family N16961_VC01193 PF03352 Methyladenine glycosylase N16961_VC01194 PF01053 Cys/Met metabolism PLP-dependent enzyme N16961_VC01195 PF13091 PLD-like domain N16961_VC01195 PF13396 N16961_VC01195 N16961_VC01196 PF00209 Sodium:neurotransmitter symporter family N16961_VC01197 PF00849 RNA pseudouridylate synthase N16961_VC01198 PF01066 CDP-alcohol phosphatidyltransferase N16961_VC01199 PF00005 ABC transporter N16961_VC01200 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01201 PF13416 Bacterial extracellular solute-binding protein N16961_VC01202 PF03724 META domain N16961_VC01203 PF06945 N16961_VC01203 N16961_VC01205 PF12698 ABC-2 family transporter protein N16961_VC01206 PF00005 ABC transporter N16961_VC01207 PF13437 HlyD family secretion protein N16961_VC01208 PF03222 Tryptophan/tyrosine permease family N16961_VC01210 PF00892 EamA-like transporter family N16961_VC01211 PF00571 CBS domain N16961_VC01211 PF01769 Divalent cation transporter N16961_VC01213 PF00072 Response regulator receiver domain N16961_VC01213 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01213 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01213 PF01627 Hpt domain N16961_VC01213 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01214 PF00072 Response regulator receiver domain N16961_VC01214 PF00196 Bacterial regulatory proteins, luxR family N16961_VC01214 PF00563 EAL domain N16961_VC01215 PF00072 Response regulator receiver domain N16961_VC01216 PF01752 Collagenase N16961_VC01216 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VC01216 PF08453 Peptidase family M9 N-terminal N16961_VC01217 PF00089 Trypsin N16961_VC01218 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC01218 PF12793 N16961_VC01218 N16961_VC01220 PF13419 Haloacid dehalogenase-like hydrolase N16961_VC01221 PF11301 N16961_VC01221 N16961_VC01222 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01222 PF12729 N16961_VC01222 N16961_VC01223 PF12614 N16961_VC01223 N16961_VC01224 PF00563 EAL domain N16961_VC01225 PF01386 Ribosomal L25p family N16961_VC01226 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01227 PF00072 Response regulator receiver domain N16961_VC01227 PF00486 Transcriptional regulatory protein, C terminal N16961_VC01229 PF00271 Helicase conserved C-terminal domain N16961_VC01229 PF04851 Type III restriction enzyme, res subunit N16961_VC01230 PF00849 RNA pseudouridylate synthase N16961_VC01230 PF01479 S4 domain N16961_VC01231 PF07690 Major Facilitator Superfamily N16961_VC01232 PF11140 N16961_VC01232 N16961_VC01233 PF11066 N16961_VC01233 N16961_VC01233 PF13460 NADH(P)-binding N16961_VC01234 PF01554 MatE N16961_VC01235 PF00005 ABC transporter N16961_VC01236 PF02687 N16961_VC01236 N16961_VC01237 PF07143 Hydroxyneurosporene synthase (CrtC) N16961_VC01237 PF17186 N16961_VC01237 N16961_VC01238 PF06965 Na+/H+ antiporter 1 N16961_VC01239 PF00202 Aminotransferase class-III N16961_VC01239 PF00282 Pyridoxal-dependent decarboxylase conserved domain N16961_VC01240 PF03435 Saccharopine dehydrogenase N16961_VC01240 PF16653 N16961_VC01240 N16961_VC01242 PF00691 OmpA family N16961_VC01243 PF02321 Outer membrane efflux protein N16961_VC01244 PF00028 Cadherin domain N16961_VC01244 PF00353 Hemolysin-type calcium-binding repeat (2 copies) N16961_VC01244 PF03160 Calx-beta domain N16961_VC01245 PF07209 N16961_VC01245 N16961_VC01246 PF07690 Major Facilitator Superfamily N16961_VC01247 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01247 PF03466 LysR substrate binding domain N16961_VC01248 PF00462 Glutaredoxin N16961_VC01249 PF01863 Protein of unknown function DUF45 N16961_VC01250 PF05971 Protein of unknown function (DUF890) N16961_VC01252 PF13424 Tetratricopeptide repeat N16961_VC01253 PF04204 Homoserine O-succinyltransferase N16961_VC01254 PF13671 AAA domain N16961_VC01255 PF12698 ABC-2 family transporter protein N16961_VC01256 PF12698 ABC-2 family transporter protein N16961_VC01257 PF13437 HlyD family secretion protein N16961_VC01257 PF13533 Biotin-lipoyl like N16961_VC01258 PF02321 Outer membrane efflux protein N16961_VC01260 PF00989 PAS fold N16961_VC01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N16961_VC01260 PF17203 N16961_VC01260 N16961_VC01261 PF00072 Response regulator receiver domain N16961_VC01261 PF12431 N16961_VC01261 N16961_VC01262 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01263 PF00072 Response regulator receiver domain N16961_VC01263 PF01584 CheW-like domain N16961_VC01265 PF10881 N16961_VC01265 N16961_VC01266 PF00990 GGDEF domain N16961_VC01269 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01270 PF07690 Major Facilitator Superfamily N16961_VC01271 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain N16961_VC01271 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain N16961_VC01272 PF00288 GHMP kinases N terminal domain N16961_VC01272 PF08544 GHMP kinases C terminal N16961_VC01272 PF10509 Galactokinase galactose-binding signature N16961_VC01273 PF01263 Aldose 1-epimerase N16961_VC01274 PF00990 GGDEF domain N16961_VC01275 PF00563 EAL domain N16961_VC01276 PF13561 Enoyl-(Acyl carrier protein) reductase N16961_VC01277 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_VC01277 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VC01277 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_VC01278 PF03306 Alpha-acetolactate decarboxylase N16961_VC01279 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01279 PF03466 LysR substrate binding domain N16961_VC01280 PF04224 N16961_VC01280 N16961_VC01281 PF00199 Catalase N16961_VC01281 PF06628 Catalase-related immune-responsive N16961_VC01282 PF12796 Ankyrin repeats (3 copies) N16961_VC01283 PF00080 Copper/zinc superoxide dismutase (SODC) N16961_VC01284 PF10070 N16961_VC01284 N16961_VC01285 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains N16961_VC01286 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01286 PF03466 LysR substrate binding domain N16961_VC01287 PF00501 AMP-binding enzyme N16961_VC01289 PF03279 N16961_VC01289 N16961_VC01290 PF04266 ASCH domain N16961_VC01291 PF09900 N16961_VC01291 N16961_VC01292 PF04342 N16961_VC01292 N16961_VC01293 PF00206 Lyase N16961_VC01293 PF10415 Fumarase C C-terminus N16961_VC01295 PF01654 N16961_VC01295 N16961_VC01296 PF02322 N16961_VC01296 N16961_VC01297 PF00005 ABC transporter N16961_VC01298 PF02687 N16961_VC01298 N16961_VC01298 PF12704 MacB-like periplasmic core domain N16961_VC01299 PF02687 N16961_VC01299 N16961_VC01299 PF12704 MacB-like periplasmic core domain N16961_VC01300 PF02321 Outer membrane efflux protein N16961_VC01301 PF16576 N16961_VC01301 N16961_VC01302 PF00753 Metallo-beta-lactamase superfamily N16961_VC01303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01303 PF03466 LysR substrate binding domain N16961_VC01304 PF00141 Peroxidase N16961_VC01305 PF00232 Glycosyl hydrolase family 1 N16961_VC01306 PF00356 Bacterial regulatory proteins, lacI family N16961_VC01306 PF13377 Periplasmic binding protein-like domain N16961_VC01307 PF01042 Endoribonuclease L-PSP N16961_VC01308 PF04074 Domain of unknown function (DUF386) N16961_VC01309 PF03009 Glycerophosphoryl diester phosphodiesterase family N16961_VC01310 PF00455 N16961_VC01310 N16961_VC01310 PF08220 DeoR-like helix-turn-helix domain N16961_VC01311 PF00005 ABC transporter N16961_VC01312 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01313 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01314 PF13416 Bacterial extracellular solute-binding protein N16961_VC01315 PF11932 N16961_VC01315 N16961_VC01316 PF01618 N16961_VC01316 N16961_VC01317 PF01618 N16961_VC01317 N16961_VC01318 PF02472 Biopolymer transport protein ExbD/TolR N16961_VC01319 PF03544 Gram-negative bacterial TonB protein C-terminal N16961_VC01321 PF01068 ATP dependent DNA ligase domain N16961_VC01321 PF14743 DNA ligase OB-like domain N16961_VC01322 PF11279 N16961_VC01322 N16961_VC01323 PF01554 MatE N16961_VC01324 PF14255 N16961_VC01324 N16961_VC01325 PF03881 Fructosamine kinase N16961_VC01326 PF12290 N16961_VC01326 N16961_VC01327 PF00877 NlpC/P60 family N16961_VC01328 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01329 PF04116 N16961_VC01329 N16961_VC01330 PF03942 N16961_VC01330 N16961_VC01331 PF00480 ROK family N16961_VC01332 PF11173 N16961_VC01332 N16961_VC01334 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01335 PF00994 Probable molybdopterin binding domain N16961_VC01335 PF03205 Molybdopterin guanine dinucleotide synthesis protein B N16961_VC01335 PF03453 MoeA N-terminal region (domain I and II) N16961_VC01335 PF03454 MoeA C-terminal region (domain IV) N16961_VC01336 PF12804 MobA-like NTP transferase domain N16961_VC01337 PF00005 ABC transporter N16961_VC01338 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01339 PF12849 PBP superfamily domain N16961_VC01340 PF00072 Response regulator receiver domain N16961_VC01340 PF00158 Sigma-54 interaction domain N16961_VC01340 PF02954 Bacterial regulatory protein, Fis family N16961_VC01341 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01341 PF17202 N16961_VC01341 N16961_VC01342 PF00005 ABC transporter N16961_VC01342 PF12848 ABC transporter N16961_VC01343 PF02634 FdhD/NarQ family N16961_VC01344 PF11749 N16961_VC01344 N16961_VC01345 PF11748 N16961_VC01345 N16961_VC01346 PF00037 4Fe-4S binding domain N16961_VC01346 PF12837 4Fe-4S binding domain N16961_VC01346 PF12838 4Fe-4S dicluster domain N16961_VC01347 PF02613 Nitrate reductase delta subunit N16961_VC01348 PF10518 TAT (twin-arginine translocation) pathway signal sequence N16961_VC01349 PF00384 Molybdopterin oxidoreductase N16961_VC01349 PF01568 Molydopterin dinucleotide binding domain N16961_VC01349 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N16961_VC01350 PF13247 4Fe-4S dicluster domain N16961_VC01351 PF01292 Prokaryotic cytochrome b561 N16961_VC01353 PF02146 Sir2 family N16961_VC01354 PF04461 Protein of unknown function (DUF520) N16961_VC01355 PF00793 DAHP synthetase I family N16961_VC01356 PF14539 Domain of unknown function (DUF4442) N16961_VC01358 PF13509 S1 domain N16961_VC01359 PF01189 NOL1/NOP2/sun family N16961_VC01359 PF13636 pre-rRNA processing and ribosome biogenesis N16961_VC01359 PF17125 N16961_VC01359 N16961_VC01360 PF02470 N16961_VC01360 N16961_VC01361 PF04403 N16961_VC01361 N16961_VC01362 PF00005 ABC transporter N16961_VC01362 PF00664 ABC transporter transmembrane region N16961_VC01363 PF13185 GAF domain N16961_VC01364 PF04352 ProQ/FINO family N16961_VC01364 PF17516 N16961_VC01364 N16961_VC01365 PF00595 PDZ domain (Also known as DHR or GLGF) N16961_VC01365 PF03572 Peptidase family S41 N16961_VC01365 PF08180 N16961_VC01365 N16961_VC01365 PF11818 N16961_VC01365 N16961_VC01367 PF01433 Peptidase family M1 N16961_VC01367 PF11940 Domain of unknown function (DUF3458) N16961_VC01367 PF17432 N16961_VC01367 N16961_VC01368 PF05088 N16961_VC01368 N16961_VC01369 PF01180 Dihydroorotate dehydrogenase N16961_VC01370 PF07126 N16961_VC01370 N16961_VC01372 PF01170 Putative RNA methylase family UPF0020 N16961_VC01372 PF02926 THUMP domain N16961_VC01372 PF10672 S-adenosylmethionine-dependent methyltransferase N16961_VC01373 PF05768 Glutaredoxin-like domain (DUF836) N16961_VC01374 PF00005 ABC transporter N16961_VC01374 PF12848 ABC transporter N16961_VC01374 PF16326 N16961_VC01374 N16961_VC01375 PF11949 N16961_VC01375 N16961_VC01376 PF04957 Ribosome modulation factor N16961_VC01377 PF07977 FabA-like domain N16961_VC01378 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_VC01378 PF13654 AAA domain N16961_VC01379 PF06303 Organiser of macrodomain of Terminus of chromosome N16961_VC01379 PF17414 N16961_VC01379 N16961_VC01380 PF12321 N16961_VC01380 N16961_VC01382 PF00665 Integrase core domain N16961_VC01383 PF01527 Transposase N16961_VC01384 PF01381 Helix-turn-helix N16961_VC01385 PF05144 N16961_VC01385 N16961_VC01385 PF05155 N16961_VC01385 N16961_VC01390 PF01381 Helix-turn-helix N16961_VC01391 PF05144 N16961_VC01391 N16961_VC01391 PF05155 N16961_VC01391 N16961_VC01395 PF12375 N16961_VC01395 N16961_VC01396 PF01381 Helix-turn-helix N16961_VC01397 PF02486 N16961_VC01397 N16961_VC01398 PF07459 N16961_VC01398 N16961_VC01401 PF16710 N16961_VC01401 N16961_VC01402 PF10734 N16961_VC01402 N16961_VC01403 PF05707 Zonular occludens toxin (Zot) N16961_VC01404 PF01375 Heat-labile enterotoxin alpha chain N16961_VC01405 PF01376 Heat-labile enterotoxin beta chain N16961_VC01406 PF01381 Helix-turn-helix N16961_VC01407 PF02486 N16961_VC01407 N16961_VC01408 PF07459 N16961_VC01408 N16961_VC01410 PF01381 Helix-turn-helix N16961_VC01411 PF02486 N16961_VC01411 N16961_VC01412 PF07459 N16961_VC01412 N16961_VC01414 PF07634 N16961_VC01414 N16961_VC01414 PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 N16961_VC01414 PF11713 Peptidase C80 family N16961_VC01414 PF12146 Putative lysophospholipase N16961_VC01414 PF16671 N16961_VC01414 N16961_VC01415 PF02794 N16961_VC01415 N16961_VC01417 PF00005 ABC transporter N16961_VC01417 PF00664 ABC transporter transmembrane region N16961_VC01417 PF03412 Peptidase C39 family N16961_VC01418 PF13437 HlyD family secretion protein N16961_VC01419 PF00005 ABC transporter N16961_VC01419 PF00664 ABC transporter transmembrane region N16961_VC01419 PF03412 Peptidase C39 family N16961_VC01420 PF00072 Response regulator receiver domain N16961_VC01420 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01421 PF08495 N16961_VC01421 N16961_VC01421 PF10442 N16961_VC01421 N16961_VC01423 PF00115 Cytochrome C and Quinol oxidase polypeptide I N16961_VC01424 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO N16961_VC01425 PF05545 N16961_VC01425 N16961_VC01426 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N16961_VC01426 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP N16961_VC01427 PF05751 N16961_VC01427 N16961_VC01428 PF00122 E1-E2 ATPase N16961_VC01428 PF00403 Heavy-metal-associated domain N16961_VC01428 PF00702 haloacid dehalogenase-like hydrolase N16961_VC01428 PF12156 N16961_VC01428 N16961_VC01429 PF03597 N16961_VC01429 N16961_VC01430 PF13386 N16961_VC01430 N16961_VC01431 PF00027 Cyclic nucleotide-binding domain N16961_VC01431 PF13545 Crp-like helix-turn-helix domain N16961_VC01432 PF00582 Universal stress protein family N16961_VC01433 PF01171 PP-loop family N16961_VC01434 PF11205 N16961_VC01434 N16961_VC01435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase N16961_VC01437 PF00005 ABC transporter N16961_VC01437 PF08402 TOBE domain N16961_VC01438 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01439 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01440 PF13416 Bacterial extracellular solute-binding protein N16961_VC01441 PF13416 Bacterial extracellular solute-binding protein N16961_VC01445 PF01235 N16961_VC01445 N16961_VC01446 PF01810 N16961_VC01446 N16961_VC01447 PF11153 N16961_VC01447 N16961_VC01449 PF01764 Lipase (class 3) N16961_VC01450 PF13503 N16961_VC01450 N16961_VC01451 PF05954 Phage late control gene D protein (GPD) N16961_VC01451 PF16671 N16961_VC01451 N16961_VC01452 PF05638 Protein of unknown function (DUF796) N16961_VC01453 PF02074 Carboxypeptidase Taq (M32) metallopeptidase N16961_VC01454 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01454 PF00672 HAMP domain N16961_VC01455 PF07690 Major Facilitator Superfamily N16961_VC01456 PF13437 HlyD family secretion protein N16961_VC01456 PF13533 Biotin-lipoyl like N16961_VC01457 PF02321 Outer membrane efflux protein N16961_VC01458 PF00440 Bacterial regulatory proteins, tetR family N16961_VC01458 PF14246 AefR-like transcriptional repressor, C-terminal region N16961_VC01459 PF00270 DEAD/DEAH box helicase N16961_VC01459 PF00271 Helicase conserved C-terminal domain N16961_VC01460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01460 PF08447 PAS fold N16961_VC01460 PF13426 PAS domain N16961_VC01461 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01461 PF00672 HAMP domain N16961_VC01462 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01463 PF01584 CheW-like domain N16961_VC01464 PF00072 Response regulator receiver domain N16961_VC01464 PF01339 CheB methylesterase N16961_VC01466 PF01739 CheR methyltransferase, SAM binding domain N16961_VC01466 PF03705 CheR methyltransferase, all-alpha domain N16961_VC01467 PF00072 Response regulator receiver domain N16961_VC01468 PF01584 CheW-like domain N16961_VC01468 PF01627 Hpt domain N16961_VC01468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01468 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_VC01470 PF00072 Response regulator receiver domain N16961_VC01471 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01472 PF00893 Small Multidrug Resistance protein N16961_VC01473 PF00875 DNA photolyase N16961_VC01473 PF03441 FAD binding domain of DNA photolyase N16961_VC01474 PF07690 Major Facilitator Superfamily N16961_VC01475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01475 PF03466 LysR substrate binding domain N16961_VC01476 PF03099 Biotin/lipoate A/B protein ligase family N16961_VC01476 PF10437 Bacterial lipoate protein ligase C-terminus N16961_VC01477 PF00012 Hsp70 protein N16961_VC01478 PF13505 Outer membrane protein beta-barrel domain N16961_VC01479 PF00270 DEAD/DEAH box helicase N16961_VC01479 PF00271 Helicase conserved C-terminal domain N16961_VC01479 PF04408 Helicase associated domain (HA2) N16961_VC01479 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N16961_VC01479 PF11898 N16961_VC01479 N16961_VC01481 PF05099 Tellurite resistance protein TerB N16961_VC01483 PF00929 Exonuclease N16961_VC01484 PF00990 GGDEF domain N16961_VC01484 PF03924 CHASE domain N16961_VC01485 PF10816 N16961_VC01485 N16961_VC01486 PF00012 Hsp70 protein N16961_VC01487 PF00012 Hsp70 protein N16961_VC01487 PF12531 N16961_VC01487 N16961_VC01488 PF00990 GGDEF domain N16961_VC01490 PF00990 GGDEF domain N16961_VC01491 PF09084 NMT1/THI5 like N16961_VC01493 PF00990 GGDEF domain N16961_VC01493 PF13181 Tetratricopeptide repeat N16961_VC01493 PF13424 Tetratricopeptide repeat N16961_VC01494 PF06508 Queuosine biosynthesis protein QueC N16961_VC01495 PF04055 Radical SAM superfamily N16961_VC01495 PF13394 4Fe-4S single cluster domain N16961_VC01497 PF08282 haloacid dehalogenase-like hydrolase N16961_VC01498 PF10414 Sirohaem synthase dimerisation region N16961_VC01498 PF13241 Putative NAD(P)-binding N16961_VC01499 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01500 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01501 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01502 PF00005 ABC transporter N16961_VC01503 PF01027 Inhibitor of apoptosis-promoting Bax1 N16961_VC01504 PF04358 DsrC like protein N16961_VC01505 PF00708 Acylphosphatase N16961_VC01506 PF10672 S-adenosylmethionine-dependent methyltransferase N16961_VC01507 PF00990 GGDEF domain N16961_VC01507 PF07494 Two component regulator propeller N16961_VC01507 PF07495 Y_Y_Y domain N16961_VC01508 PF08534 Redoxin N16961_VC01509 PF00072 Response regulator receiver domain N16961_VC01509 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01509 PF01627 Hpt domain N16961_VC01509 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01509 PF08448 PAS fold N16961_VC01510 PF00072 Response regulator receiver domain N16961_VC01510 PF13487 HD domain N16961_VC01511 PF02798 Glutathione S-transferase, N-terminal domain N16961_VC01511 PF14497 Glutathione S-transferase, C-terminal domain N16961_VC01512 PF01557 Fumarylacetoacetate (FAA) hydrolase family N16961_VC01513 PF04209 homogentisate 1,2-dioxygenase N16961_VC01514 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VC01514 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal N16961_VC01515 PF01546 Peptidase family M20/M25/M40 N16961_VC01515 PF07687 Peptidase dimerisation domain N16961_VC01516 PF00293 NUDIX domain N16961_VC01517 PF00583 Acetyltransferase (GNAT) family N16961_VC01518 PF00501 AMP-binding enzyme N16961_VC01518 PF13193 AMP-binding enzyme C-terminal domain N16961_VC01518 PF16177 N16961_VC01518 N16961_VC01519 PF04303 PrpF protein N16961_VC01520 PF00330 Aconitase family (aconitate hydratase) N16961_VC01520 PF00694 Aconitase C-terminal domain N16961_VC01521 PF00285 Citrate synthase N16961_VC01522 PF13714 Phosphoenolpyruvate phosphomutase N16961_VC01523 PF00392 Bacterial regulatory proteins, gntR family N16961_VC01523 PF07729 FCD domain N16961_VC01524 PF03401 Tripartite tricarboxylate transporter family receptor N16961_VC01525 PF07331 N16961_VC01525 N16961_VC01526 PF01970 N16961_VC01526 N16961_VC01528 PF07313 Protein of unknown function (DUF1460) N16961_VC01529 PF13505 Outer membrane protein beta-barrel domain N16961_VC01530 PF02653 N16961_VC01530 N16961_VC01531 PF00005 ABC transporter N16961_VC01532 PF13407 Periplasmic binding protein domain N16961_VC01533 PF02579 Dinitrogenase iron-molybdenum cofactor N16961_VC01534 PF04400 N16961_VC01534 N16961_VC01535 PF00912 Transglycosylase N16961_VC01536 PF00072 Response regulator receiver domain N16961_VC01536 PF00486 Transcriptional regulatory protein, C terminal N16961_VC01537 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01537 PF00672 HAMP domain N16961_VC01537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01538 PF06629 N16961_VC01538 N16961_VC01539 PF04393 N16961_VC01539 N16961_VC01540 PF00072 Response regulator receiver domain N16961_VC01541 PF00027 Cyclic nucleotide-binding domain N16961_VC01541 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01542 PF00939 Sodium:sulfate symporter transmembrane region N16961_VC01543 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01543 PF12729 N16961_VC01543 N16961_VC01544 PF00842 Alanine racemase, C-terminal domain N16961_VC01544 PF01168 Alanine racemase, N-terminal domain N16961_VC01545 PF00892 EamA-like transporter family N16961_VC01546 PF11163 N16961_VC01546 N16961_VC01547 PF13302 Acetyltransferase (GNAT) domain N16961_VC01548 PF00158 Sigma-54 interaction domain N16961_VC01548 PF00989 PAS fold N16961_VC01549 PF05128 N16961_VC01549 N16961_VC01550 PF04317 N16961_VC01550 N16961_VC01552 PF05681 N16961_VC01552 N16961_VC01552 PF05683 Fumarase C-terminus N16961_VC01553 PF00425 chorismate binding enzyme N16961_VC01553 PF04715 Anthranilate synthase component I, N terminal region N16961_VC01554 PF00293 NUDIX domain N16961_VC01555 PF01490 N16961_VC01555 N16961_VC01556 PF03313 N16961_VC01556 N16961_VC01556 PF03315 Serine dehydratase beta chain N16961_VC01557 PF01242 6-pyruvoyl tetrahydropterin synthase N16961_VC01558 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01559 PF00152 tRNA synthetases class II (D, K and N) N16961_VC01559 PF01336 OB-fold nucleic acid binding domain N16961_VC01560 PF08543 Phosphomethylpyrimidine kinase N16961_VC01561 PF01966 HD domain N16961_VC01562 PF00155 Aminotransferase class I and II N16961_VC01563 PF00027 Cyclic nucleotide-binding domain N16961_VC01563 PF00571 CBS domain N16961_VC01563 PF03445 N16961_VC01563 N16961_VC01563 PF10335 N16961_VC01563 N16961_VC01564 PF00929 Exonuclease N16961_VC01566 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01566 PF00672 HAMP domain N16961_VC01566 PF02743 Cache domain N16961_VC01567 PF04349 Periplasmic glucan biosynthesis protein, MdoG N16961_VC01568 PF13632 Glycosyl transferase family group 2 N16961_VC01569 PF00356 Bacterial regulatory proteins, lacI family N16961_VC01569 PF13377 Periplasmic binding protein-like domain N16961_VC01570 PF04794 YdjC-like protein N16961_VC01571 PF02056 Family 4 glycosyl hydrolase N16961_VC01571 PF11975 Family 4 glycosyl hydrolase C-terminal domain N16961_VC01572 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N16961_VC01573 PF02378 Phosphotransferase system, EIIC N16961_VC01574 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VC01575 PF01522 Polysaccharide deacetylase N16961_VC01576 PF02028 BCCT family transporter N16961_VC01577 PF01047 MarR family N16961_VC01578 PF00072 Response regulator receiver domain N16961_VC01578 PF00196 Bacterial regulatory proteins, luxR family N16961_VC01579 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01579 PF07730 Histidine kinase N16961_VC01579 PF17200 N16961_VC01579 N16961_VC01580 PF06808 N16961_VC01580 N16961_VC01581 PF04290 N16961_VC01581 N16961_VC01582 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_VC01584 PF11201 N16961_VC01584 N16961_VC01585 PF00753 Metallo-beta-lactamase superfamily N16961_VC01586 PF05951 N16961_VC01586 N16961_VC01587 PF01471 Putative peptidoglycan binding domain N16961_VC01587 PF03734 L,D-transpeptidase catalytic domain N16961_VC01588 PF07433 N16961_VC01588 N16961_VC01589 PF09375 Imelysin N16961_VC01590 PF06537 N16961_VC01590 N16961_VC01591 PF09375 Imelysin N16961_VC01592 PF00925 GTP cyclohydrolase II N16961_VC01594 PF07690 Major Facilitator Superfamily N16961_VC01595 PF12833 Helix-turn-helix domain N16961_VC01596 PF00581 Rhodanese-like domain N16961_VC01597 PF00521 DNA gyrase/topoisomerase IV, subunit A N16961_VC01597 PF03989 DNA gyrase C-terminal domain, beta-propeller N16961_VC01598 PF13489 Methyltransferase domain N16961_VC01599 PF00317 Ribonucleotide reductase, all-alpha domain N16961_VC01599 PF02867 Ribonucleotide reductase, barrel domain N16961_VC01599 PF03477 ATP cone domain N16961_VC01600 PF00268 Ribonucleotide reductase, small chain N16961_VC01601 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VC01603 PF00994 Probable molybdopterin binding domain N16961_VC01604 PF13084 N16961_VC01604 N16961_VC01605 PF13740 ACT domain N16961_VC01606 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01606 PF00672 HAMP domain N16961_VC01606 PF17200 N16961_VC01606 N16961_VC01607 PF11042 N16961_VC01607 N16961_VC01608 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N16961_VC01609 PF00005 ABC transporter N16961_VC01610 PF01032 FecCD transport family N16961_VC01611 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N16961_VC01612 PF00300 Histidine phosphatase superfamily (branch 1) N16961_VC01613 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N16961_VC01614 PF02654 N16961_VC01614 N16961_VC01615 PF02277 Phosphoribosyltransferase N16961_VC01616 PF01641 SelR domain N16961_VC01617 PF00375 Sodium:dicarboxylate symporter family N16961_VC01618 PF00929 Exonuclease N16961_VC01618 PF08411 Exonuclease C-terminal N16961_VC01619 PF03788 N16961_VC01619 N16961_VC01620 PF04172 N16961_VC01620 N16961_VC01621 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VC01621 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VC01622 PF03547 N16961_VC01622 N16961_VC01623 PF02222 ATP-grasp domain N16961_VC01624 PF05724 Thiopurine S-methyltransferase (TPMT) N16961_VC01626 PF04607 Region found in RelA / SpoT proteins N16961_VC01627 PF00216 Bacterial DNA-binding protein N16961_VC01628 PF01588 Putative tRNA binding domain N16961_VC01628 PF03147 Ferredoxin-fold anticodon binding domain N16961_VC01628 PF03483 B3/4 domain N16961_VC01628 PF03484 tRNA synthetase B5 domain N16961_VC01629 PF01409 tRNA synthetases class II core domain (F) N16961_VC01629 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N16961_VC01630 PF00583 Acetyltransferase (GNAT) family N16961_VC01631 PF00990 GGDEF domain N16961_VC01631 PF01814 Hemerythrin HHE cation binding domain N16961_VC01636 PF01066 CDP-alcohol phosphatidyltransferase N16961_VC01637 PF01541 GIY-YIG catalytic domain N16961_VC01637 PF02151 UvrB/uvrC motif N16961_VC01637 PF08459 UvrC Helix-hairpin-helix N-terminal N16961_VC01637 PF14520 Helix-hairpin-helix domain N16961_VC01638 PF00072 Response regulator receiver domain N16961_VC01638 PF00196 Bacterial regulatory proteins, luxR family N16961_VC01639 PF00136 DNA polymerase family B N16961_VC01639 PF03104 DNA polymerase family B, exonuclease domain N16961_VC01640 PF00563 EAL domain N16961_VC01640 PF02378 Phosphotransferase system, EIIC N16961_VC01641 PF01909 Nucleotidyltransferase domain N16961_VC01642 PF01132 Elongation factor P (EF-P) OB domain N16961_VC01642 PF08207 Elongation factor P (EF-P) KOW-like domain N16961_VC01642 PF09285 Elongation factor P, C-terminal N16961_VC01643 PF04269 Protein of unknown function, DUF440 N16961_VC01644 PF11383 N16961_VC01644 N16961_VC01645 PF00392 Bacterial regulatory proteins, gntR family N16961_VC01645 PF07702 UTRA domain N16961_VC01646 PF01979 Amidohydrolase family N16961_VC01647 PF00491 Arginase family N16961_VC01648 PF01175 Urocanase N16961_VC01648 PF17391 N16961_VC01648 N16961_VC01648 PF17392 N16961_VC01648 N16961_VC01649 PF00221 Aromatic amino acid lyase N16961_VC01650 PF12119 N16961_VC01650 N16961_VC01651 PF00089 Trypsin N16961_VC01652 PF04191 Phospholipid methyltransferase N16961_VC01653 PF01565 FAD binding domain N16961_VC01653 PF02913 FAD linked oxidases, C-terminal domain N16961_VC01653 PF13183 4Fe-4S dicluster domain N16961_VC01654 PF11813 N16961_VC01654 N16961_VC01655 PF10979 N16961_VC01655 N16961_VC01656 PF00691 OmpA family N16961_VC01656 PF13488 N16961_VC01656 N16961_VC01657 PF08238 Sel1 repeat N16961_VC01660 PF01259 SAICAR synthetase N16961_VC01662 PF00390 Malic enzyme, N-terminal domain N16961_VC01662 PF03949 Malic enzyme, NAD binding domain N16961_VC01663 PF11872 N16961_VC01663 N16961_VC01664 PF02698 DUF218 domain N16961_VC01665 PF00990 GGDEF domain N16961_VC01666 PF00266 Aminotransferase class-V N16961_VC01667 PF10014 2OG-Fe dioxygenase N16961_VC01668 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC01669 PF00005 ABC transporter N16961_VC01669 PF00664 ABC transporter transmembrane region N16961_VC01670 PF00005 ABC transporter N16961_VC01671 PF00849 RNA pseudouridylate synthase N16961_VC01671 PF01479 S4 domain N16961_VC01672 PF01300 Telomere recombination N16961_VC01673 PF02811 PHP domain N16961_VC01675 PF00425 chorismate binding enzyme N16961_VC01675 PF04715 Anthranilate synthase component I, N terminal region N16961_VC01676 PF00117 Glutamine amidotransferase class-I N16961_VC01677 PF00591 Glycosyl transferase family, a/b domain N16961_VC01677 PF02885 Glycosyl transferase family, helical bundle domain N16961_VC01678 PF00218 Indole-3-glycerol phosphate synthase N16961_VC01678 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N16961_VC01679 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC01680 PF00290 Tryptophan synthase alpha chain N16961_VC01681 PF00375 Sodium:dicarboxylate symporter family N16961_VC01682 PF00265 Thymidine kinase N16961_VC01683 PF00152 tRNA synthetases class II (D, K and N) N16961_VC01683 PF01336 OB-fold nucleic acid binding domain N16961_VC01683 PF02938 GAD domain N16961_VC01684 PF01904 Protein of unknown function DUF72 N16961_VC01685 PF13649 Methyltransferase domain N16961_VC01686 PF08003 Protein of unknown function (DUF1698) N16961_VC01687 PF05618 Putative ATP-dependant zinc protease N16961_VC01688 PF14400 N16961_VC01688 N16961_VC01688 PF14402 N16961_VC01688 N16961_VC01689 PF14397 N16961_VC01689 N16961_VC01690 PF00266 Aminotransferase class-V N16961_VC01691 PF06097 N16961_VC01691 N16961_VC01692 PF00027 Cyclic nucleotide-binding domain N16961_VC01692 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01693 PF00072 Response regulator receiver domain N16961_VC01695 PF04993 TfoX N-terminal domain N16961_VC01695 PF04994 TfoX C-terminal domain N16961_VC01696 PF08668 HDOD domain N16961_VC01697 PF03956 N16961_VC01697 N16961_VC01699 PF00282 Pyridoxal-dependent decarboxylase conserved domain N16961_VC01700 PF01380 SIS domain N16961_VC01700 PF01418 Helix-turn-helix domain, rpiR family N16961_VC01701 PF00465 Iron-containing alcohol dehydrogenase N16961_VC01702 PF00462 Glutaredoxin N16961_VC01703 PF02080 TrkA-C domain N16961_VC01703 PF06826 N16961_VC01703 N16961_VC01704 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC01704 PF02861 Clp amino terminal domain N16961_VC01704 PF07724 AAA domain (Cdc48 subfamily) N16961_VC01704 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VC01705 PF02617 ATP-dependent Clp protease adaptor protein ClpS N16961_VC01706 PF00313 'Cold-shock' DNA-binding domain N16961_VC01707 PF03971 Monomeric isocitrate dehydrogenase N16961_VC01708 PF00849 RNA pseudouridylate synthase N16961_VC01709 PF01502 Phosphoribosyl-AMP cyclohydrolase N16961_VC01709 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N16961_VC01710 PF00977 Histidine biosynthesis protein N16961_VC01711 PF00977 Histidine biosynthesis protein N16961_VC01712 PF00117 Glutamine amidotransferase class-I N16961_VC01713 PF00475 Imidazoleglycerol-phosphate dehydratase N16961_VC01713 PF08645 Polynucleotide kinase 3 phosphatase N16961_VC01714 PF00155 Aminotransferase class I and II N16961_VC01715 PF00815 Histidinol dehydrogenase N16961_VC01716 PF01634 ATP phosphoribosyltransferase N16961_VC01716 PF08029 HisG, C-terminal domain N16961_VC01718 PF03553 N16961_VC01718 N16961_VC01720 PF00816 H-NS histone family N16961_VC01721 PF00294 pfkB family carbohydrate kinase N16961_VC01722 PF03054 tRNA methyl transferase N16961_VC01723 PF04356 Protein of unknown function (DUF489) N16961_VC01724 PF00206 Lyase N16961_VC01724 PF08328 Adenylosuccinate lyase C-terminal N16961_VC01725 PF12915 N16961_VC01725 N16961_VC01726 PF16036 N16961_VC01726 N16961_VC01727 PF11086 N16961_VC01727 N16961_VC01728 PF02353 Mycolic acid cyclopropane synthetase N16961_VC01729 PF07103 N16961_VC01729 N16961_VC01730 PF01593 Flavin containing amine oxidoreductase N16961_VC01731 PF00106 short chain dehydrogenase N16961_VC01732 PF12680 SnoaL-like domain N16961_VC01733 PF01435 Peptidase family M48 N16961_VC01735 PF13500 AAA domain N16961_VC01736 PF08241 Methyltransferase domain N16961_VC01737 PF00155 Aminotransferase class I and II N16961_VC01738 PF04055 Radical SAM superfamily N16961_VC01738 PF06968 Biotin and Thiamin Synthesis associated domain N16961_VC01739 PF00202 Aminotransferase class-III N16961_VC01740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_VC01740 PF02403 Seryl-tRNA synthetase N-terminal domain N16961_VC01741 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC01741 PF12002 MgsA AAA+ ATPase C terminal N16961_VC01741 PF16193 N16961_VC01741 N16961_VC01742 PF03548 Outer membrane lipoprotein carrier protein LolA N16961_VC01743 PF02810 SEC-C motif N16961_VC01743 PF03695 Uncharacterised protein family (UPF0149) N16961_VC01744 PF01207 Dihydrouridine synthase (Dus) N16961_VC01745 PF00990 GGDEF domain N16961_VC01746 PF00005 ABC transporter N16961_VC01747 PF02653 N16961_VC01747 N16961_VC01748 PF04392 ABC transporter substrate binding protein N16961_VC01749 PF09905 Uncharacterized conserved protein (DUF2132) N16961_VC01750 PF04217 N16961_VC01750 N16961_VC01751 PF00871 Acetokinase family N16961_VC01752 PF01515 Phosphate acetyl/butaryl transferase N16961_VC01752 PF07085 DRTGG domain N16961_VC01752 PF13500 AAA domain N16961_VC01753 PF13409 Glutathione S-transferase, N-terminal domain N16961_VC01753 PF13410 Glutathione S-transferase, C-terminal domain N16961_VC01754 PF00005 ABC transporter N16961_VC01754 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC01755 PF00005 ABC transporter N16961_VC01755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC01756 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01756 PF12911 N16961_VC01756 N16961_VC01757 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01758 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC01759 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein N16961_VC01760 PF00672 HAMP domain N16961_VC01760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01761 PF00072 Response regulator receiver domain N16961_VC01761 PF13487 HD domain N16961_VC01762 PF00072 Response regulator receiver domain N16961_VC01762 PF00563 EAL domain N16961_VC01763 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01763 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01764 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC01764 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01764 PF08448 PAS fold N16961_VC01765 PF04509 CheC-like family N16961_VC01766 PF00072 Response regulator receiver domain N16961_VC01767 PF00072 Response regulator receiver domain N16961_VC01767 PF08668 HDOD domain N16961_VC01768 PF01627 Hpt domain N16961_VC01769 PF01300 Telomere recombination N16961_VC01769 PF03481 Putative GTP-binding controlling metal-binding N16961_VC01771 PF12833 Helix-turn-helix domain N16961_VC01772 PF01161 Phosphatidylethanolamine-binding protein N16961_VC01773 PF02517 CAAX protease self-immunity N16961_VC01774 PF00704 Glycosyl hydrolases family 18 N16961_VC01774 PF06483 N16961_VC01774 N16961_VC01774 PF14600 Cellulose-binding domain N16961_VC01775 PF07690 Major Facilitator Superfamily N16961_VC01776 PF00782 Dual specificity phosphatase, catalytic domain N16961_VC01777 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_VC01777 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_VC01778 PF01022 Bacterial regulatory protein, arsR family N16961_VC01780 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01780 PF00990 GGDEF domain N16961_VC01782 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N16961_VC01783 PF09619 Type III secretion system lipoprotein chaperone (YscW) N16961_VC01784 PF13622 Thioesterase-like superfamily N16961_VC01785 PF01037 AsnC family N16961_VC01785 PF13412 Winged helix-turn-helix DNA-binding N16961_VC01786 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC01787 PF01343 Peptidase family S49 N16961_VC01787 PF08496 N16961_VC01787 N16961_VC01788 PF00106 short chain dehydrogenase N16961_VC01789 PF03692 N16961_VC01789 N16961_VC01790 PF03692 N16961_VC01790 N16961_VC01791 PF02132 RecR protein N16961_VC01791 PF13662 Toprim domain N16961_VC01792 PF02575 YbaB/EbfC DNA-binding family N16961_VC01793 PF12168 N16961_VC01793 N16961_VC01793 PF12169 DNA polymerase III subunits gamma and tau domain III N16961_VC01793 PF12170 DNA polymerase III tau subunit V interacting with alpha N16961_VC01793 PF13177 DNA polymerase III, delta subunit N16961_VC01794 PF00156 Phosphoribosyl transferase domain N16961_VC01795 PF04304 N16961_VC01795 N16961_VC01797 PF00072 Response regulator receiver domain N16961_VC01798 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01798 PF03466 LysR substrate binding domain N16961_VC01799 PF00881 Nitroreductase family N16961_VC01800 PF00378 Enoyl-CoA hydratase/isomerase family N16961_VC01800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N16961_VC01800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N16961_VC01801 PF00108 Thiolase, N-terminal domain N16961_VC01801 PF02803 Thiolase, C-terminal domain N16961_VC01802 PF04542 Sigma-70 region 2 N16961_VC01802 PF08281 Sigma-70, region 4 N16961_VC01803 PF11859 N16961_VC01803 N16961_VC01804 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_VC01805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_VC01806 PF01451 Low molecular weight phosphotyrosine protein phosphatase N16961_VC01807 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP N16961_VC01807 PF12557 Cob(I)alamin adenosyltransferase N terminal N16961_VC01808 PF05170 N16961_VC01808 N16961_VC01809 PF00485 Phosphoribulokinase / Uridine kinase family N16961_VC01810 PF10609 ParA/MinD ATPase like N16961_VC01811 PF01588 Putative tRNA binding domain N16961_VC01811 PF09334 tRNA synthetases class I (M) N16961_VC01813 PF01048 Phosphorylase superfamily N16961_VC01814 PF00122 E1-E2 ATPase N16961_VC01814 PF00403 Heavy-metal-associated domain N16961_VC01814 PF00702 haloacid dehalogenase-like hydrolase N16961_VC01815 PF00571 CBS domain N16961_VC01816 PF00990 GGDEF domain N16961_VC01817 PF02391 MoaE protein N16961_VC01818 PF02597 ThiS family N16961_VC01819 PF01967 MoaC family N16961_VC01820 PF00994 Probable molybdopterin binding domain N16961_VC01821 PF04055 Radical SAM superfamily N16961_VC01821 PF06463 Molybdenum Cofactor Synthesis C N16961_VC01821 PF13353 4Fe-4S single cluster domain N16961_VC01823 PF01933 Uncharacterised protein family UPF0052 N16961_VC01824 PF01627 Hpt domain N16961_VC01825 PF00072 Response regulator receiver domain N16961_VC01825 PF00158 Sigma-54 interaction domain N16961_VC01825 PF02954 Bacterial regulatory protein, Fis family N16961_VC01827 PF00271 Helicase conserved C-terminal domain N16961_VC01827 PF02151 UvrB/uvrC motif N16961_VC01827 PF04851 Type III restriction enzyme, res subunit N16961_VC01827 PF12344 Ultra-violet resistance protein B N16961_VC01829 PF02508 N16961_VC01829 N16961_VC01830 PF04060 Putative Fe-S cluster N16961_VC01830 PF14697 4Fe-4S dicluster domain N16961_VC01831 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N16961_VC01831 PF10531 SLBB domain N16961_VC01831 PF12838 4Fe-4S dicluster domain N16961_VC01831 PF13375 RnfC Barrel sandwich hybrid domain N16961_VC01832 PF03116 N16961_VC01832 N16961_VC01833 PF04205 FMN-binding domain N16961_VC01834 PF02508 N16961_VC01834 N16961_VC01835 PF00633 Helix-hairpin-helix motif N16961_VC01835 PF00730 HhH-GPD superfamily base excision DNA repair protein N16961_VC01835 PF10576 Iron-sulfur binding domain of endonuclease III N16961_VC01836 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VC01837 PF10952 N16961_VC01837 N16961_VC01838 PF00691 OmpA family N16961_VC01839 PF00929 Exonuclease N16961_VC01840 PF03553 N16961_VC01840 N16961_VC01840 PF13726 N16961_VC01840 N16961_VC01841 PF13522 Glutamine amidotransferase domain N16961_VC01842 PF02674 N16961_VC01842 N16961_VC01843 PF05036 Sporulation related domain N16961_VC01844 PF02875 Mur ligase family, glutamate ligase domain N16961_VC01844 PF08245 Mur ligase middle domain N16961_VC01845 PF01039 Carboxyl transferase domain N16961_VC01846 PF01416 tRNA pseudouridine synthase N16961_VC01848 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_VC01848 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N16961_VC01849 PF00367 phosphotransferase system, EIIB N16961_VC01849 PF02378 Phosphotransferase system, EIIC N16961_VC01850 PF01979 Amidohydrolase family N16961_VC01851 PF00480 ROK family N16961_VC01852 PF00999 Sodium/hydrogen exchanger family N16961_VC01852 PF02254 TrkA-N domain N16961_VC01853 PF00733 Asparagine synthase N16961_VC01853 PF13537 Glutamine amidotransferase domain N16961_VC01854 PF02357 Transcription termination factor nusG N16961_VC01855 PF00854 POT family N16961_VC01856 PF00762 Ferrochelatase N16961_VC01857 PF00406 Adenylate kinase N16961_VC01857 PF05191 Adenylate kinase, active site lid N16961_VC01858 PF00183 Hsp90 protein N16961_VC01858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC01859 PF00486 Transcriptional regulatory protein, C terminal N16961_VC01860 PF17323 N16961_VC01860 N16961_VC01861 PF10262 Rdx family N16961_VC01862 PF12850 Calcineurin-like phosphoesterase superfamily domain N16961_VC01863 PF01370 NAD dependent epimerase/dehydratase family N16961_VC01863 PF08338 Domain of unknown function (DUF1731) N16961_VC01864 PF00106 short chain dehydrogenase N16961_VC01865 PF00085 Thioredoxin N16961_VC01865 PF14559 Tetratricopeptide repeat N16961_VC01865 PF14561 Tetratricopeptide repeat N16961_VC01866 PF01145 SPFH domain / Band 7 family N16961_VC01866 PF16200 N16961_VC01866 N16961_VC01867 PF01957 NfeD-like C-terminal, partner-binding N16961_VC01868 PF13411 MerR HTH family regulatory protein N16961_VC01870 PF13609 Gram-negative porin N16961_VC01871 PF00533 BRCA1 C Terminus (BRCT) domain N16961_VC01871 PF01653 NAD-dependent DNA ligase adenylation domain N16961_VC01871 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N16961_VC01871 PF03120 NAD-dependent DNA ligase OB-fold domain N16961_VC01871 PF12826 Helix-hairpin-helix motif N16961_VC01871 PF14520 Helix-hairpin-helix domain N16961_VC01872 PF04354 ZipA, C-terminal FtsZ-binding domain N16961_VC01873 PF07264 Etoposide-induced protein 2 N16961_VC01874 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC01875 PF00381 PTS HPr component phosphorylation site N16961_VC01876 PF00391 PEP-utilising enzyme, mobile domain N16961_VC01876 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_VC01876 PF05524 PEP-utilising enzyme, N-terminal N16961_VC01877 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N16961_VC01878 PF01494 FAD binding domain N16961_VC01879 PF00919 Uncharacterized protein family UPF0004 N16961_VC01879 PF01938 TRAM domain N16961_VC01879 PF04055 Radical SAM superfamily N16961_VC01880 PF02562 PhoH-like protein N16961_VC01881 PF02130 Uncharacterized protein family UPF0054 N16961_VC01882 PF00571 CBS domain N16961_VC01882 PF03471 Transporter associated domain N16961_VC01883 PF00795 Carbon-nitrogen hydrolase N16961_VC01884 PF07295 N16961_VC01884 N16961_VC01885 PF00133 tRNA synthetases class I (I, L, M and V) N16961_VC01885 PF08264 Anticodon-binding domain of tRNA N16961_VC01885 PF13603 Leucyl-tRNA synthetase, Domain 2 N16961_VC01886 PF04390 Lipopolysaccharide-assembly N16961_VC01887 PF06144 DNA polymerase III, delta subunit N16961_VC01887 PF14840 Processivity clamp loader gamma complex DNA pol III C-term N16961_VC01888 PF02410 Oligomerisation domain N16961_VC01889 PF02590 Predicted SPOUT methyltransferase N16961_VC01890 PF00905 Penicillin binding protein transpeptidase domain N16961_VC01890 PF03717 Penicillin-binding Protein dimerisation domain N16961_VC01891 PF01098 N16961_VC01891 N16961_VC01892 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel N16961_VC01892 PF05036 Sporulation related domain N16961_VC01893 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_VC01893 PF07943 Penicillin-binding protein 5, C-terminal domain N16961_VC01894 PF04359 Protein of unknown function (DUF493) N16961_VC01895 PF03099 Biotin/lipoate A/B protein ligase family N16961_VC01896 PF04055 Radical SAM superfamily N16961_VC01896 PF16881 N16961_VC01896 N16961_VC01898 PF00464 Serine hydroxymethyltransferase N16961_VC01899 PF02588 N16961_VC01899 N16961_VC01900 PF04892 N16961_VC01900 N16961_VC01902 PF02706 Chain length determinant protein N16961_VC01902 PF13614 AAA domain N16961_VC01902 PF13807 N16961_VC01902 N16961_VC01903 PF02563 Polysaccharide biosynthesis/export protein N16961_VC01903 PF10531 SLBB domain N16961_VC01904 PF10082 N16961_VC01904 N16961_VC01905 PF02397 N16961_VC01905 N16961_VC01905 PF13727 CoA-binding domain N16961_VC01907 PF04932 N16961_VC01907 N16961_VC01908 PF16458 N16961_VC01908 N16961_VC01909 PF12708 Pectate lyase superfamily protein N16961_VC01911 PF03808 N16961_VC01911 N16961_VC01913 PF00534 Glycosyl transferases group 1 N16961_VC01914 PF00501 AMP-binding enzyme N16961_VC01915 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC01917 PF13440 N16961_VC01917 N16961_VC01917 PF14667 Polysaccharide biosynthesis C-terminal domain N16961_VC01918 PF00534 Glycosyl transferases group 1 N16961_VC01918 PF13439 Glycosyltransferase Family 4 N16961_VC01919 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC01920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N16961_VC01920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N16961_VC01920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N16961_VC01921 PF02350 UDP-N-acetylglucosamine 2-epimerase N16961_VC01923 PF01451 Low molecular weight phosphotyrosine protein phosphatase N16961_VC01924 PF00873 AcrB/AcrD/AcrF family N16961_VC01925 PF16576 N16961_VC01925 N16961_VC01930 PF00128 Alpha amylase, catalytic domain N16961_VC01931 PF00367 phosphotransferase system, EIIB N16961_VC01931 PF02378 Phosphotransferase system, EIIC N16961_VC01932 PF00356 Bacterial regulatory proteins, lacI family N16961_VC01932 PF13377 Periplasmic binding protein-like domain N16961_VC01933 PF13242 HAD-hyrolase-like N16961_VC01934 PF00005 ABC transporter N16961_VC01934 PF09383 NIL domain N16961_VC01935 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC01936 PF03180 NLPA lipoprotein N16961_VC01937 PF10071 N16961_VC01937 N16961_VC01938 PF07348 Syd protein (SUKH-2) N16961_VC01939 PF14489 QueF-like protein N16961_VC01939 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N16961_VC01940 PF13424 Tetratricopeptide repeat N16961_VC01941 PF00990 GGDEF domain N16961_VC01942 PF03641 Possible lysine decarboxylase N16961_VC01942 PF11892 Domain of unknown function (DUF3412) N16961_VC01942 PF14793 Domain of unknown function (DUF4478) N16961_VC01943 PF01367 5'-3' exonuclease, C-terminal SAM fold N16961_VC01943 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N16961_VC01944 PF04241 N16961_VC01944 N16961_VC01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC01945 PF03466 LysR substrate binding domain N16961_VC01947 PF02568 Thiamine biosynthesis protein (ThiI) N16961_VC01947 PF02926 THUMP domain N16961_VC01948 PF00691 OmpA family N16961_VC01948 PF13677 N16961_VC01948 N16961_VC01949 PF01618 N16961_VC01949 N16961_VC01950 PF02609 Exonuclease VII small subunit N16961_VC01951 PF00348 Polyprenyl synthetase N16961_VC01952 PF02779 Transketolase, pyrimidine binding domain N16961_VC01952 PF02780 Transketolase, C-terminal domain N16961_VC01952 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N16961_VC01953 PF00849 RNA pseudouridylate synthase N16961_VC01954 PF04287 tRNA pseudouridine synthase C N16961_VC01955 PF12069 N16961_VC01955 N16961_VC01956 PF11743 N16961_VC01956 N16961_VC01957 PF13302 Acetyltransferase (GNAT) domain N16961_VC01960 PF02639 N16961_VC01960 N16961_VC01961 PF03806 N16961_VC01961 N16961_VC01962 PF00444 Ribosomal protein L36 N16961_VC01963 PF01197 Ribosomal protein L31 N16961_VC01964 PF01980 Uncharacterised protein family UPF0066 N16961_VC01965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_VC01965 PF03129 Anticodon binding domain N16961_VC01965 PF04073 Aminoacyl-tRNA editing domain N16961_VC01966 PF04391 N16961_VC01966 N16961_VC01967 PF06786 N16961_VC01967 N16961_VC01968 PF14056 N16961_VC01968 N16961_VC01969 PF01797 Transposase IS200 like N16961_VC01970 PF02769 AIR synthase related protein, C-terminal domain N16961_VC01970 PF13507 CobB/CobQ-like glutamine amidotransferase domain N16961_VC01971 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VC01971 PF01464 Transglycosylase SLT domain N16961_VC01973 PF14437 N16961_VC01973 N16961_VC01974 PF03806 N16961_VC01974 N16961_VC01975 PF07963 Prokaryotic N-terminal methylation motif N16961_VC01977 PF07963 Prokaryotic N-terminal methylation motif N16961_VC01978 PF07963 Prokaryotic N-terminal methylation motif N16961_VC01978 PF12019 Type II transport protein GspH N16961_VC01979 PF07963 Prokaryotic N-terminal methylation motif N16961_VC01979 PF16732 N16961_VC01979 N16961_VC01980 PF00226 DnaJ domain N16961_VC01980 PF00684 DnaJ central domain N16961_VC01980 PF01556 DnaJ C terminal domain N16961_VC01981 PF00012 Hsp70 protein N16961_VC01982 PF01025 GrpE N16961_VC01983 PF01513 ATP-NAD kinase N16961_VC01984 PF13476 AAA domain N16961_VC01985 PF04355 SmpA / OmlA family N16961_VC01986 PF03658 RnfH family Ubiquitin N16961_VC01987 PF03364 Polyketide cyclase / dehydrase and lipid transport N16961_VC01988 PF01668 SmpB protein N16961_VC01991 PF00589 Phage integrase family N16961_VC01991 PF13356 Domain of unknown function (DUF4102) N16961_VC01993 PF13322 N16961_VC01993 N16961_VC01993 PF13402 Peptidase M60-like family N16961_VC01993 PF17291 N16961_VC01993 N16961_VC01994 PF13505 Outer membrane protein beta-barrel domain N16961_VC01995 PF01551 Peptidase family M23 N16961_VC01997 PF06271 N16961_VC01997 N16961_VC01998 PF13531 Bacterial extracellular solute-binding protein N16961_VC01999 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC01999 PF00672 HAMP domain N16961_VC01999 PF02743 Cache domain N16961_VC02000 PF01478 Type IV leader peptidase family N16961_VC02000 PF06750 N16961_VC02000 N16961_VC02001 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family N16961_VC02002 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F N16961_VC02003 PF00482 Type II secretion system (T2SS), protein F N16961_VC02004 PF00437 Type II/IV secretion system protein N16961_VC02005 PF17456 N16961_VC02005 N16961_VC02009 PF10671 Toxin co-regulated pilus biosynthesis protein Q N16961_VC02011 PF05946 Toxin-coregulated pilus subunit TcpA N16961_VC02011 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02013 PF00486 Transcriptional regulatory protein, C terminal N16961_VC02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02016 PF08534 Redoxin N16961_VC02020 PF00041 Fibronectin type III domain N16961_VC02020 PF10462 Peptidase M66 N16961_VC02020 PF12561 N16961_VC02020 N16961_VC02021 PF00171 Aldehyde dehydrogenase family N16961_VC02022 PF00665 Integrase core domain N16961_VC02024 PF07804 HipA-like C-terminal domain N16961_VC02025 PF01381 Helix-turn-helix N16961_VC02026 PF13489 Methyltransferase domain N16961_VC02027 PF00271 Helicase conserved C-terminal domain N16961_VC02027 PF04851 Type III restriction enzyme, res subunit N16961_VC02027 PF13091 PLD-like domain N16961_VC02028 PF08378 N16961_VC02028 N16961_VC02030 PF04434 N16961_VC02030 N16961_VC02033 PF11953 Domain of unknown function (DUF3470) N16961_VC02033 PF13187 4Fe-4S dicluster domain N16961_VC02034 PF00588 SpoU rRNA Methylase family N16961_VC02035 PF10000 ACT domain N16961_VC02035 PF13840 ACT domain N16961_VC02036 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N16961_VC02037 PF03802 N16961_VC02037 N16961_VC02038 PF04223 Citrate lyase, alpha subunit (CitF) N16961_VC02039 PF03328 HpcH/HpaI aldolase/citrate lyase family N16961_VC02040 PF06857 N16961_VC02040 N16961_VC02041 PF08218 Citrate lyase ligase C-terminal domain N16961_VC02041 PF13673 Acetyltransferase (GNAT) domain N16961_VC02042 PF03390 N16961_VC02042 N16961_VC02043 PF04277 N16961_VC02043 N16961_VC02044 PF00364 Biotin-requiring enzyme N16961_VC02044 PF00682 HMGL-like N16961_VC02044 PF02436 Conserved carboxylase domain N16961_VC02045 PF03977 N16961_VC02045 N16961_VC02046 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02046 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N16961_VC02046 PF17203 N16961_VC02046 N16961_VC02047 PF00072 Response regulator receiver domain N16961_VC02047 PF12431 N16961_VC02047 N16961_VC02049 PF08883 Dopa 4,5-dioxygenase family N16961_VC02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02050 PF03466 LysR substrate binding domain N16961_VC02051 PF01266 FAD dependent oxidoreductase N16961_VC02052 PF01235 N16961_VC02052 N16961_VC02053 PF00753 Metallo-beta-lactamase superfamily N16961_VC02053 PF14863 Alkyl sulfatase dimerisation N16961_VC02053 PF14864 Alkyl sulfatase C-terminal N16961_VC02054 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02054 PF03466 LysR substrate binding domain N16961_VC02055 PF01648 4'-phosphopantetheinyl transferase superfamily N16961_VC02056 PF00005 ABC transporter N16961_VC02057 PF01032 FecCD transport family N16961_VC02058 PF01032 FecCD transport family N16961_VC02059 PF01497 Periplasmic binding protein N16961_VC02060 PF00668 Condensation domain N16961_VC02061 PF13561 Enoyl-(Acyl carrier protein) reductase N16961_VC02062 PF00425 chorismate binding enzyme N16961_VC02063 PF00501 AMP-binding enzyme N16961_VC02063 PF13193 AMP-binding enzyme C-terminal domain N16961_VC02064 PF00550 Phosphopantetheine attachment site N16961_VC02064 PF00857 Isochorismatase family N16961_VC02065 PF01184 N16961_VC02065 N16961_VC02066 PF00182 Chitinase class I N16961_VC02066 PF02839 Carbohydrate binding domain N16961_VC02067 PF00117 Glutamine amidotransferase class-I N16961_VC02067 PF00958 GMP synthase C terminal domain N16961_VC02067 PF02540 NAD synthase N16961_VC02068 PF00478 IMP dehydrogenase / GMP reductase domain N16961_VC02068 PF00571 CBS domain N16961_VC02069 PF02601 N16961_VC02069 N16961_VC02069 PF13742 N16961_VC02069 N16961_VC02070 PF07191 zinc-ribbons N16961_VC02072 PF01926 50S ribosome-binding GTPase N16961_VC02072 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N16961_VC02073 PF13360 PQQ-like domain N16961_VC02074 PF09976 Tetratricopeptide repeat N16961_VC02075 PF03129 Anticodon binding domain N16961_VC02075 PF13393 Histidyl-tRNA synthetase N16961_VC02076 PF04551 GcpE protein N16961_VC02077 PF13413 Helix-turn-helix domain N16961_VC02077 PF13464 N16961_VC02077 N16961_VC02078 PF04055 Radical SAM superfamily N16961_VC02079 PF00334 Nucleoside diphosphate kinase N16961_VC02080 PF00883 Cytosol aminopeptidase family, catalytic domain N16961_VC02080 PF12404 N16961_VC02080 N16961_VC02081 PF04384 Iron-sulphur cluster assembly N16961_VC02082 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VC02083 PF00012 Hsp70 protein N16961_VC02084 PF00226 DnaJ domain N16961_VC02084 PF07743 HSCB C-terminal oligomerisation domain N16961_VC02085 PF01521 Iron-sulphur cluster biosynthesis N16961_VC02086 PF01592 NifU-like N terminal domain N16961_VC02087 PF00266 Aminotransferase class-V N16961_VC02088 PF02082 Transcriptional regulator N16961_VC02089 PF00588 SpoU rRNA Methylase family N16961_VC02090 PF00459 Inositol monophosphatase family N16961_VC02091 PF02355 Protein export membrane protein N16961_VC02091 PF07549 SecD/SecF GG Motif N16961_VC02092 PF02355 Protein export membrane protein N16961_VC02092 PF07549 SecD/SecF GG Motif N16961_VC02092 PF13721 SecD export protein N-terminal TM region N16961_VC02093 PF02699 Preprotein translocase subunit N16961_VC02094 PF01702 Queuine tRNA-ribosyltransferase N16961_VC02095 PF02547 Queuosine biosynthesis protein N16961_VC02096 PF00571 CBS domain N16961_VC02097 PF00463 Isocitrate lyase family N16961_VC02098 PF01274 Malate synthase N16961_VC02099 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02099 PF03466 LysR substrate binding domain N16961_VC02100 PF00578 AhpC/TSA family N16961_VC02100 PF10417 C-terminal domain of 1-Cys peroxiredoxin N16961_VC02101 PF03932 CutC family N16961_VC02102 PF03976 Polyphosphate kinase 2 (PPK2) N16961_VC02103 PF01895 PhoU domain N16961_VC02104 PF00005 ABC transporter N16961_VC02105 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02106 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02107 PF02503 Polyphosphate kinase middle domain N16961_VC02107 PF13089 Polyphosphate kinase N-terminal domain N16961_VC02107 PF13090 Polyphosphate kinase C-terminal domain N16961_VC02108 PF02541 Ppx/GppA phosphatase family N16961_VC02109 PF12849 PBP superfamily domain N16961_VC02110 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC02110 PF00989 PAS fold N16961_VC02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02110 PF11808 N16961_VC02110 N16961_VC02111 PF00072 Response regulator receiver domain N16961_VC02111 PF00486 Transcriptional regulatory protein, C terminal N16961_VC02112 PF04381 Putative exonuclease, RdgC N16961_VC02113 PF01136 N16961_VC02113 N16961_VC02113 PF16325 N16961_VC02113 N16961_VC02114 PF00037 4Fe-4S binding domain N16961_VC02115 PF00881 Nitroreductase family N16961_VC02116 PF08921 Domain of unknown function (DUF1904) N16961_VC02121 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC02121 PF02861 Clp amino terminal domain N16961_VC02121 PF07724 AAA domain (Cdc48 subfamily) N16961_VC02121 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VC02122 PF02578 Multi-copper polyphenol oxidoreductase laccase N16961_VC02123 PF00849 RNA pseudouridylate synthase N16961_VC02123 PF01479 S4 domain N16961_VC02124 PF13525 Outer membrane lipoprotein N16961_VC02125 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N16961_VC02127 PF00800 Prephenate dehydratase N16961_VC02127 PF01817 Chorismate mutase type II N16961_VC02128 PF13416 Bacterial extracellular solute-binding protein N16961_VC02129 PF00563 EAL domain N16961_VC02129 PF00990 GGDEF domain N16961_VC02130 PF01931 Protein of unknown function DUF84 N16961_VC02131 PF01371 Trp repressor protein N16961_VC02132 PF01464 Transglycosylase SLT domain N16961_VC02132 PF14718 Soluble lytic murein transglycosylase L domain N16961_VC02133 PF00005 ABC transporter N16961_VC02133 PF12848 ABC transporter N16961_VC02134 PF07238 PilZ domain N16961_VC02135 PF01817 Chorismate mutase type II N16961_VC02135 PF02153 Prephenate dehydrogenase N16961_VC02136 PF00793 DAHP synthetase I family N16961_VC02137 PF06580 N16961_VC02137 N16961_VC02137 PF07694 5TMR of 5TMR-LYT N16961_VC02137 PF13492 GAF domain N16961_VC02138 PF00072 Response regulator receiver domain N16961_VC02138 PF04397 LytTr DNA-binding domain N16961_VC02139 PF00933 Glycosyl hydrolase family 3 N terminal domain N16961_VC02140 PF03702 Uncharacterised protein family (UPF0075) N16961_VC02141 PF13580 SIS domain N16961_VC02142 PF00999 Sodium/hydrogen exchanger family N16961_VC02142 PF02254 TrkA-N domain N16961_VC02143 PF10973 N16961_VC02143 N16961_VC02144 PF02554 N16961_VC02144 N16961_VC02144 PF13722 N16961_VC02144 N16961_VC02145 PF02401 LytB protein N16961_VC02146 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC02147 PF01252 N16961_VC02147 N16961_VC02148 PF00133 tRNA synthetases class I (I, L, M and V) N16961_VC02148 PF06827 Zinc finger found in FPG and IleRS N16961_VC02148 PF08264 Anticodon-binding domain of tRNA N16961_VC02149 PF01687 Riboflavin kinase N16961_VC02149 PF06574 FAD synthetase N16961_VC02150 PF03023 N16961_VC02150 N16961_VC02151 PF01649 Ribosomal protein S20 N16961_VC02152 PF01022 Bacterial regulatory protein, arsR family N16961_VC02153 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02153 PF03466 LysR substrate binding domain N16961_VC02154 PF02690 N16961_VC02154 N16961_VC02155 PF00303 Thymidylate synthase N16961_VC02156 PF01790 N16961_VC02156 N16961_VC02157 PF01925 N16961_VC02157 N16961_VC02158 PF00391 PEP-utilising enzyme, mobile domain N16961_VC02158 PF01590 GAF domain N16961_VC02158 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_VC02158 PF05524 PEP-utilising enzyme, N-terminal N16961_VC02159 PF00293 NUDIX domain N16961_VC02160 PF02976 DNA mismatch repair enzyme MutH N16961_VC02161 PF00248 Aldo/keto reductase family N16961_VC02163 PF00158 Sigma-54 interaction domain N16961_VC02163 PF02954 Bacterial regulatory protein, Fis family N16961_VC02164 PF00152 tRNA synthetases class II (D, K and N) N16961_VC02164 PF01336 OB-fold nucleic acid binding domain N16961_VC02165 PF00472 RF-1 domain N16961_VC02165 PF03462 PCRF domain N16961_VC02166 PF05525 N16961_VC02166 N16961_VC02167 PF05175 Methyltransferase small domain N16961_VC02168 PF00270 DEAD/DEAH box helicase N16961_VC02168 PF00271 Helicase conserved C-terminal domain N16961_VC02169 PF00009 Elongation factor Tu GTP binding domain N16961_VC02169 PF03144 Elongation factor Tu domain 2 N16961_VC02169 PF16658 N16961_VC02169 N16961_VC02170 PF00563 EAL domain N16961_VC02170 PF00990 GGDEF domain N16961_VC02171 PF00583 Acetyltransferase (GNAT) family N16961_VC02172 PF03603 DNA polymerase III psi subunit N16961_VC02173 PF13527 Acetyltransferase (GNAT) domain N16961_VC02174 PF02036 SCP-2 sterol transfer family N16961_VC02175 PF00563 EAL domain N16961_VC02175 PF00990 GGDEF domain N16961_VC02175 PF08448 PAS fold N16961_VC02175 PF13188 PAS domain N16961_VC02176 PF01136 N16961_VC02176 N16961_VC02177 PF01136 N16961_VC02177 N16961_VC02178 PF01554 MatE N16961_VC02179 PF01047 MarR family N16961_VC02181 PF00013 KH domain N16961_VC02181 PF00575 S1 RNA binding domain N16961_VC02181 PF01138 3' exoribonuclease family, domain 1 N16961_VC02181 PF03725 3' exoribonuclease family, domain 2 N16961_VC02181 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N16961_VC02182 PF00312 Ribosomal protein S15 N16961_VC02184 PF01509 TruB family pseudouridylate synthase (N terminal domain) N16961_VC02184 PF09157 Pseudouridine synthase II TruB, C-terminal N16961_VC02184 PF16198 N16961_VC02184 N16961_VC02185 PF02033 Ribosome-binding factor A N16961_VC02186 PF00009 Elongation factor Tu GTP binding domain N16961_VC02186 PF04760 Translation initiation factor IF-2, N-terminal region N16961_VC02186 PF08364 N16961_VC02186 N16961_VC02186 PF11987 Translation-initiation factor 2 N16961_VC02187 PF08529 NusA N-terminal domain N16961_VC02187 PF13184 NusA-like KH domain N16961_VC02187 PF14520 Helix-hairpin-helix domain N16961_VC02188 PF02576 Uncharacterised BCR, YhbC family COG0779 N16961_VC02188 PF17384 N16961_VC02188 N16961_VC02192 PF03840 Preprotein translocase SecG subunit N16961_VC02194 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VC02194 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VC02194 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VC02194 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VC02195 PF00809 Pterin binding enzyme N16961_VC02196 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VC02196 PF01434 Peptidase family M41 N16961_VC02196 PF06480 FtsH Extracellular N16961_VC02197 PF01728 FtsJ-like methyltransferase N16961_VC02198 PF01985 CRS1 / YhbY (CRM) domain N16961_VC02199 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_VC02199 PF03449 Transcription elongation factor, N-terminal N16961_VC02200 PF13609 Gram-negative porin N16961_VC02201 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family N16961_VC02202 PF00579 tRNA synthetases class I (W and Y) N16961_VC02202 PF01479 S4 domain N16961_VC02203 PF01551 Peptidase family M23 N16961_VC02203 PF08525 N16961_VC02203 N16961_VC02204 PF00873 AcrB/AcrD/AcrF family N16961_VC02205 PF16576 N16961_VC02205 N16961_VC02206 PF01521 Iron-sulphur cluster biosynthesis N16961_VC02207 PF00202 Aminotransferase class-III N16961_VC02209 PF01594 N16961_VC02209 N16961_VC02210 PF05175 Methyltransferase small domain N16961_VC02210 PF08468 Methyltransferase small domain N-terminal N16961_VC02211 PF00072 Response regulator receiver domain N16961_VC02211 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC02211 PF00672 HAMP domain N16961_VC02211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02211 PF13188 PAS domain N16961_VC02212 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC02213 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02214 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02214 PF12911 N16961_VC02214 N16961_VC02215 PF00005 ABC transporter N16961_VC02215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC02216 PF00005 ABC transporter N16961_VC02216 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC02217 PF00759 Glycosyl hydrolase family 9 N16961_VC02217 PF02927 N-terminal ig-like domain of cellulase N16961_VC02218 PF01869 BadF/BadG/BcrA/BcrD ATPase family N16961_VC02219 PF00728 Glycosyl hydrolase family 20, catalytic domain N16961_VC02219 PF02838 Glycosyl hydrolase family 20, domain 2 N16961_VC02220 PF06165 Glycosyltransferase family 36 N16961_VC02220 PF17167 N16961_VC02220 N16961_VC02221 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VC02221 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VC02221 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VC02221 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VC02222 PF00005 ABC transporter N16961_VC02222 PF08402 TOBE domain N16961_VC02223 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02224 PF13343 Bacterial extracellular solute-binding protein N16961_VC02225 PF00909 Ammonium Transporter Family N16961_VC02226 PF00543 Nitrogen regulatory protein P-II N16961_VC02227 PF06062 N16961_VC02227 N16961_VC02228 PF00330 Aconitase family (aconitate hydratase) N16961_VC02228 PF06434 Aconitate hydratase 2 N-terminus N16961_VC02228 PF11791 Aconitate B N-terminal domain N16961_VC02229 PF01734 Patatin-like phospholipase N16961_VC02229 PF07244 Surface antigen variable number repeat N16961_VC02230 PF00905 Penicillin binding protein transpeptidase domain N16961_VC02230 PF00912 Transglycosylase N16961_VC02230 PF14814 Bifunctional transglycosylase second domain N16961_VC02231 PF00270 DEAD/DEAH box helicase N16961_VC02231 PF00271 Helicase conserved C-terminal domain N16961_VC02231 PF04408 Helicase associated domain (HA2) N16961_VC02231 PF08482 N16961_VC02231 N16961_VC02232 PF12697 Alpha/beta hydrolase family N16961_VC02233 PF03749 Sugar fermentation stimulation protein N16961_VC02234 PF01258 Prokaryotic dksA/traR C4-type zinc finger N16961_VC02235 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_VC02236 PF01743 Poly A polymerase head domain N16961_VC02236 PF12626 Polymerase A arginine-rich C-terminus N16961_VC02236 PF12627 Probable RNA and SrmB- binding site of polymerase A N16961_VC02237 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N16961_VC02238 PF02548 Ketopantoate hydroxymethyltransferase N16961_VC02239 PF02569 Pantoate-beta-alanine ligase N16961_VC02240 PF01061 N16961_VC02240 N16961_VC02241 PF00005 ABC transporter N16961_VC02242 PF00916 N16961_VC02242 N16961_VC02242 PF01740 STAS domain N16961_VC02243 PF00484 Carbonic anhydrase N16961_VC02244 PF00156 Phosphoribosyl transferase domain N16961_VC02245 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02247 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N16961_VC02248 PF04348 LppC putative lipoprotein N16961_VC02249 PF02021 Uncharacterised protein family UPF0102 N16961_VC02250 PF13580 SIS domain N16961_VC02251 PF04972 BON domain N16961_VC02252 PF04386 Stringent starvation protein B N16961_VC02253 PF00043 Glutathione S-transferase, C-terminal domain N16961_VC02253 PF13417 Glutathione S-transferase, N-terminal domain N16961_VC02254 PF02167 Cytochrome C1 family N16961_VC02255 PF00032 Cytochrome b(C-terminal)/b6/petD N16961_VC02255 PF00033 Cytochrome b(N-terminal)/b6/petB N16961_VC02256 PF00355 Rieske [2Fe-2S] domain N16961_VC02256 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal N16961_VC02257 PF00380 Ribosomal protein S9/S16 N16961_VC02258 PF00572 Ribosomal protein L13 N16961_VC02259 PF03969 AFG1-like ATPase N16961_VC02260 PF06295 N16961_VC02260 N16961_VC02261 PF00595 PDZ domain (Also known as DHR or GLGF) N16961_VC02261 PF13180 PDZ domain N16961_VC02261 PF13365 Trypsin-like peptidase domain N16961_VC02262 PF13180 PDZ domain N16961_VC02262 PF13365 Trypsin-like peptidase domain N16961_VC02263 PF01245 Ribosomal protein L19 N16961_VC02264 PF01746 tRNA (Guanine-1)-methyltransferase N16961_VC02265 PF01782 RimM N-terminal domain N16961_VC02265 PF05239 PRC-barrel domain N16961_VC02266 PF00886 Ribosomal protein S16 N16961_VC02267 PF00448 SRP54-type protein, GTPase domain N16961_VC02267 PF02881 SRP54-type protein, helical bundle domain N16961_VC02267 PF02978 Signal peptide binding domain N16961_VC02268 PF01578 N16961_VC02268 N16961_VC02269 PF00571 CBS domain N16961_VC02269 PF01595 N16961_VC02269 N16961_VC02269 PF03471 Transporter associated domain N16961_VC02270 PF02664 S-Ribosylhomocysteinase (LuxS) N16961_VC02271 PF04262 Glutamate-cysteine ligase N16961_VC02272 PF00675 Insulinase (Peptidase family M16) N16961_VC02272 PF05193 Peptidase M16 inactive domain N16961_VC02273 PF09335 N16961_VC02273 N16961_VC02274 PF08240 Alcohol dehydrogenase GroES-like domain N16961_VC02274 PF13602 Zinc-binding dehydrogenase N16961_VC02275 PF03977 N16961_VC02275 N16961_VC02276 PF00364 Biotin-requiring enzyme N16961_VC02276 PF00682 HMGL-like N16961_VC02276 PF02436 Conserved carboxylase domain N16961_VC02277 PF04277 N16961_VC02277 N16961_VC02286 PF02599 Global regulator protein family N16961_VC02287 PF00696 Amino acid kinase family N16961_VC02288 PF01411 tRNA synthetases class II (A) N16961_VC02288 PF02272 DHHA1 domain N16961_VC02288 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N16961_VC02289 PF02631 RecX family N16961_VC02290 PF00154 recA bacterial DNA recombination protein N16961_VC02291 PF02464 Competence-damaged protein N16961_VC02292 PF00005 ABC transporter N16961_VC02292 PF12857 N16961_VC02292 N16961_VC02293 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02294 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02295 PF13531 Bacterial extracellular solute-binding protein N16961_VC02296 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VC02297 PF00488 MutS domain V N16961_VC02297 PF01624 MutS domain I N16961_VC02297 PF05188 MutS domain II N16961_VC02297 PF05190 MutS family domain IV N16961_VC02297 PF05192 MutS domain III N16961_VC02298 PF00140 Sigma-70 factor, region 1 N16961_VC02298 PF04539 Sigma-70 region 3 N16961_VC02298 PF04542 Sigma-70 region 2 N16961_VC02298 PF04545 Sigma-70, region 4 N16961_VC02299 PF01476 LysM domain N16961_VC02299 PF01551 Peptidase family M23 N16961_VC02300 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N16961_VC02301 PF01975 Survival protein SurE N16961_VC02302 PF01142 tRNA pseudouridine synthase D (TruD) N16961_VC02303 PF02542 YgbB family N16961_VC02304 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N16961_VC02305 PF04977 Septum formation initiator N16961_VC02306 PF02673 N16961_VC02306 N16961_VC02307 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N16961_VC02308 PF02152 Dihydroneopterin aldolase N16961_VC02309 PF02660 N16961_VC02309 N16961_VC02310 PF00561 alpha/beta hydrolase fold N16961_VC02311 PF00814 Glycoprotease family N16961_VC02312 PF01165 Ribosomal protein S21 N16961_VC02313 PF09424 Yqey-like protein N16961_VC02314 PF01807 CHC2 zinc finger N16961_VC02314 PF08275 DNA primase catalytic core, N-terminal domain N16961_VC02314 PF08278 DNA primase DnaG DnaB-binding N16961_VC02314 PF10410 DnaB-helicase binding domain of primase N16961_VC02314 PF13155 Toprim-like N16961_VC02315 PF00140 Sigma-70 factor, region 1 N16961_VC02315 PF03979 Sigma-70 factor, region 1 N16961_VC02315 PF04539 Sigma-70 region 3 N16961_VC02315 PF04542 Sigma-70 region 2 N16961_VC02315 PF04545 Sigma-70, region 4 N16961_VC02315 PF04546 Sigma-70, non-essential region N16961_VC02317 PF00589 Phage integrase family N16961_VC02317 PF13356 Domain of unknown function (DUF4102) N16961_VC02317 PF14659 Phage integrase, N-terminal SAM-like domain N16961_VC02318 PF00563 EAL domain N16961_VC02318 PF08668 HDOD domain N16961_VC02319 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02319 PF02743 Cache domain N16961_VC02320 PF12833 Helix-turn-helix domain N16961_VC02321 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02321 PF08447 PAS fold N16961_VC02323 PF04002 RadC-like JAB domain N16961_VC02324 PF10980 Protein of unknown function (DUF2787) N16961_VC02325 PF10980 Protein of unknown function (DUF2787) N16961_VC02326 PF13280 N16961_VC02326 N16961_VC02329 PF01551 Peptidase family M23 N16961_VC02329 PF04225 Opacity-associated protein A LysM-like domain N16961_VC02330 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02331 PF13737 N16961_VC02331 N16961_VC02332 PF01527 Transposase N16961_VC02333 PF00665 Integrase core domain N16961_VC02334 PF00075 RNase H N16961_VC02335 PF05930 Prophage CP4-57 regulatory protein (AlpA) N16961_VC02336 PF11726 N16961_VC02336 N16961_VC02337 PF11726 N16961_VC02337 N16961_VC02338 PF11726 N16961_VC02338 N16961_VC02342 PF12532 N16961_VC02342 N16961_VC02343 PF01553 Acyltransferase N16961_VC02343 PF13444 Acetyltransferase (GNAT) domain N16961_VC02344 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_VC02345 PF01380 SIS domain N16961_VC02345 PF13522 Glutamine amidotransferase domain N16961_VC02346 PF00455 N16961_VC02346 N16961_VC02346 PF08220 DeoR-like helix-turn-helix domain N16961_VC02347 PF00224 Pyruvate kinase, barrel domain N16961_VC02347 PF02887 Pyruvate kinase, alpha/beta domain N16961_VC02349 PF04402 Protein of unknown function (DUF541) N16961_VC02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02350 PF03466 LysR substrate binding domain N16961_VC02351 PF01810 N16961_VC02351 N16961_VC02352 PF00924 Mechanosensitive ion channel N16961_VC02352 PF05552 Conserved TM helix N16961_VC02353 PF01116 Fructose-bisphosphate aldolase class-II N16961_VC02354 PF00162 Phosphoglycerate kinase N16961_VC02355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_VC02355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_VC02356 PF00593 TonB dependent receptor N16961_VC02356 PF07715 TonB-dependent Receptor Plug Domain N16961_VC02357 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02357 PF03466 LysR substrate binding domain N16961_VC02358 PF00456 Transketolase, thiamine diphosphate binding domain N16961_VC02358 PF02779 Transketolase, pyrimidine binding domain N16961_VC02358 PF02780 Transketolase, C-terminal domain N16961_VC02359 PF00438 S-adenosylmethionine synthetase, N-terminal domain N16961_VC02359 PF02772 S-adenosylmethionine synthetase, central domain N16961_VC02359 PF02773 S-adenosylmethionine synthetase, C-terminal domain N16961_VC02360 PF10263 N16961_VC02360 N16961_VC02360 PF17283 N16961_VC02360 N16961_VC02361 PF04231 Endonuclease I N16961_VC02362 PF04452 RNA methyltransferase N16961_VC02363 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N16961_VC02363 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N16961_VC02364 PF02622 Uncharacterized ACR, COG1678 N16961_VC02365 PF03652 Uncharacterised protein family (UPF0081) N16961_VC02366 PF00579 tRNA synthetases class I (W and Y) N16961_VC02366 PF01479 S4 domain N16961_VC02367 PF00196 Bacterial regulatory proteins, luxR family N16961_VC02368 PF00437 Type II/IV secretion system protein N16961_VC02369 PF00437 Type II/IV secretion system protein N16961_VC02370 PF01168 Alanine racemase, N-terminal domain N16961_VC02371 PF03807 NADP oxidoreductase coenzyme F420-dependent N16961_VC02371 PF14748 Pyrroline-5-carboxylate reductase dimerisation N16961_VC02372 PF02325 N16961_VC02372 N16961_VC02373 PF02594 Uncharacterised ACR, YggU family COG1872 N16961_VC02374 PF14467 Domain of unknown function (DUF4426) N16961_VC02375 PF01725 Ham1 family N16961_VC02376 PF04055 Radical SAM superfamily N16961_VC02376 PF06969 HemN C-terminal domain N16961_VC02377 PF04960 Glutaminase N16961_VC02378 PF02390 Putative methyltransferase N16961_VC02379 PF00633 Helix-hairpin-helix motif N16961_VC02379 PF00730 HhH-GPD superfamily base excision DNA repair protein N16961_VC02379 PF14815 NUDIX domain N16961_VC02380 PF04362 Bacterial Fe(2+) trafficking N16961_VC02381 PF01464 Transglycosylase SLT domain N16961_VC02381 PF11873 Domain of unknown function (DUF3393) N16961_VC02386 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02386 PF17200 N16961_VC02386 N16961_VC02392 PF00226 DnaJ domain N16961_VC02392 PF05099 Tellurite resistance protein TerB N16961_VC02393 PF03968 OstA-like protein N16961_VC02393 PF04453 Organic solvent tolerance protein N16961_VC02394 PF09312 SurA N-terminal domain N16961_VC02394 PF13616 PPIC-type PPIASE domain N16961_VC02395 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N16961_VC02396 PF00398 Ribosomal RNA adenine dimethylase N16961_VC02397 PF04379 Protein of unknown function (DUF525) N16961_VC02398 PF00149 Calcineurin-like phosphoesterase N16961_VC02399 PF00186 Dihydrofolate reductase N16961_VC02400 PF12821 N16961_VC02400 N16961_VC02401 PF06738 N16961_VC02401 N16961_VC02402 PF01018 GTP1/OBG N16961_VC02402 PF01926 50S ribosome-binding GTPase N16961_VC02403 PF01016 Ribosomal L27 protein N16961_VC02404 PF00829 Ribosomal prokaryotic L21 protein N16961_VC02405 PF00348 Polyprenyl synthetase N16961_VC02406 PF13520 Amino acid permease N16961_VC02407 PF00056 lactate/malate dehydrogenase, NAD binding domain N16961_VC02407 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N16961_VC02408 PF01316 Arginine repressor, DNA binding domain N16961_VC02408 PF02863 Arginine repressor, C-terminal domain N16961_VC02409 PF16868 N16961_VC02409 N16961_VC02410 PF06808 N16961_VC02410 N16961_VC02410 PF11874 N16961_VC02410 N16961_VC02411 PF00582 Universal stress protein family N16961_VC02412 PF09834 N16961_VC02412 N16961_VC02414 PF06877 Regulator of ribonuclease activity B N16961_VC02415 PF02274 Amidinotransferase N16961_VC02416 PF01523 Putative modulator of DNA gyrase N16961_VC02417 PF00795 Carbon-nitrogen hydrolase N16961_VC02418 PF13116 N16961_VC02418 N16961_VC02418 PF13502 N16961_VC02418 N16961_VC02419 PF00575 S1 RNA binding domain N16961_VC02419 PF10150 Ribonuclease E/G family N16961_VC02420 PF02545 Maf-like protein N16961_VC02421 PF04093 N16961_VC02421 N16961_VC02422 PF04085 rod shape-determining protein MreC N16961_VC02423 PF06723 MreB/Mbl protein N16961_VC02426 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02427 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02428 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02429 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02430 PF07963 Prokaryotic N-terminal methylation motif N16961_VC02432 PF00482 Type II secretion system (T2SS), protein F N16961_VC02433 PF00437 Type II/IV secretion system protein N16961_VC02433 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N16961_VC02435 PF13401 AAA domain N16961_VC02436 PF00263 N16961_VC02436 N16961_VC02436 PF07655 N16961_VC02436 N16961_VC02438 PF04612 Type II secretion system (T2SS), protein M N16961_VC02440 PF00563 EAL domain N16961_VC02440 PF00990 GGDEF domain N16961_VC02440 PF17157 N16961_VC02440 N16961_VC02441 PF00436 Single-strand binding protein family N16961_VC02442 PF00196 Bacterial regulatory proteins, luxR family N16961_VC02443 PF00483 Nucleotidyl transferase N16961_VC02444 PF00005 ABC transporter N16961_VC02445 PF04932 N16961_VC02445 N16961_VC02445 PF11846 N16961_VC02445 N16961_VC02445 PF15864 N16961_VC02445 N16961_VC02446 PF00266 Aminotransferase class-V N16961_VC02448 PF00696 Amino acid kinase family N16961_VC02449 PF00809 Pterin binding enzyme N16961_VC02449 PF02310 B12 binding domain N16961_VC02449 PF02574 Homocysteine S-methyltransferase N16961_VC02449 PF02607 B12 binding domain N16961_VC02449 PF02965 Vitamin B12 dependent methionine synthase, activation domain N16961_VC02450 PF00999 Sodium/hydrogen exchanger family N16961_VC02465 PF01507 Phosphoadenosine phosphosulfate reductase family N16961_VC02466 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N16961_VC02466 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N16961_VC02467 PF00175 Oxidoreductase NAD-binding domain N16961_VC02467 PF00258 Flavodoxin N16961_VC02467 PF00667 FAD binding domain N16961_VC02469 PF13505 Outer membrane protein beta-barrel domain N16961_VC02470 PF09583 N16961_VC02470 N16961_VC02471 PF01207 Dihydrouridine synthase (Dus) N16961_VC02472 PF01475 Ferric uptake regulator family N16961_VC02473 PF13690 Chemotaxis phosphatase CheX N16961_VC02474 PF12706 Beta-lactamase superfamily domain N16961_VC02475 PF00342 Phosphoglucose isomerase N16961_VC02476 PF01894 Uncharacterised protein family UPF0047 N16961_VC02477 PF00842 Alanine racemase, C-terminal domain N16961_VC02477 PF01168 Alanine racemase, N-terminal domain N16961_VC02478 PF00772 DnaB-like helicase N terminal domain N16961_VC02478 PF03796 DnaB-like helicase C terminal domain N16961_VC02479 PF04338 Protein of unknown function, DUF481 N16961_VC02480 PF01281 Ribosomal protein L9, N-terminal domain N16961_VC02480 PF03948 Ribosomal protein L9, C-terminal domain N16961_VC02481 PF01084 Ribosomal protein S18 N16961_VC02482 PF00436 Single-strand binding protein family N16961_VC02483 PF01250 Ribosomal protein S6 N16961_VC02484 PF00210 Ferritin-like domain N16961_VC02485 PF04324 BFD-like [2Fe-2S] binding domain N16961_VC02486 PF00009 Elongation factor Tu GTP binding domain N16961_VC02486 PF03143 Elongation factor Tu C-terminal domain N16961_VC02486 PF03144 Elongation factor Tu domain 2 N16961_VC02487 PF00009 Elongation factor Tu GTP binding domain N16961_VC02487 PF00679 Elongation factor G C-terminus N16961_VC02487 PF03144 Elongation factor Tu domain 2 N16961_VC02487 PF03764 Elongation factor G, domain IV N16961_VC02487 PF14492 Elongation Factor G, domain II N16961_VC02488 PF00177 Ribosomal protein S7p/S5e N16961_VC02489 PF00164 Ribosomal protein S12/S23 N16961_VC02490 PF04077 DsrH like protein N16961_VC02491 PF02635 DsrE/DsrF-like family N16961_VC02492 PF02635 DsrE/DsrF-like family N16961_VC02493 PF08348 N16961_VC02493 N16961_VC02493 PF13309 N16961_VC02493 N16961_VC02494 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VC02494 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_VC02495 PF00400 WD domain, G-beta repeat N16961_VC02496 PF04102 SlyX N16961_VC02497 PF09838 N16961_VC02497 N16961_VC02498 PF01145 SPFH domain / Band 7 family N16961_VC02499 PF01145 SPFH domain / Band 7 family N16961_VC02499 PF12221 N16961_VC02499 N16961_VC02500 PF01926 50S ribosome-binding GTPase N16961_VC02500 PF13167 N16961_VC02500 N16961_VC02500 PF16360 N16961_VC02500 N16961_VC02501 PF17209 N16961_VC02501 N16961_VC02502 PF01715 IPP transferase N16961_VC02503 PF01119 DNA mismatch repair protein, C-terminal domain N16961_VC02503 PF08676 MutL C terminal dimerisation domain N16961_VC02503 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02504 PF01476 LysM domain N16961_VC02504 PF01520 N-acetylmuramoyl-L-alanine amidase N16961_VC02504 PF11741 AMIN domain N16961_VC02505 PF02367 Uncharacterised P-loop hydrolase UPF0079 N16961_VC02506 PF08331 N16961_VC02506 N16961_VC02506 PF13484 N16961_VC02506 N16961_VC02515 PF00929 Exonuclease N16961_VC02516 PF03193 Protein of unknown function, DUF258 N16961_VC02517 PF02666 N16961_VC02517 N16961_VC02518 PF00939 Sodium:sulfate symporter transmembrane region N16961_VC02519 PF00892 EamA-like transporter family N16961_VC02520 PF01676 Metalloenzyme superfamily N16961_VC02520 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N16961_VC02521 PF01551 Peptidase family M23 N16961_VC02523 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02523 PF13972 Bacterial transcriptional repressor N16961_VC02524 PF01208 Uroporphyrinogen decarboxylase (URO-D) N16961_VC02525 PF00293 NUDIX domain N16961_VC02525 PF09297 NADH pyrophosphatase zinc ribbon domain N16961_VC02526 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ N16961_VC02527 PF00623 RNA polymerase Rpb1, domain 2 N16961_VC02527 PF04983 RNA polymerase Rpb1, domain 3 N16961_VC02527 PF04997 RNA polymerase Rpb1, domain 1 N16961_VC02527 PF04998 RNA polymerase Rpb1, domain 5 N16961_VC02527 PF05000 RNA polymerase Rpb1, domain 4 N16961_VC02528 PF00562 RNA polymerase Rpb2, domain 6 N16961_VC02528 PF04560 RNA polymerase Rpb2, domain 7 N16961_VC02528 PF04561 RNA polymerase Rpb2, domain 2 N16961_VC02528 PF04563 RNA polymerase beta subunit N16961_VC02528 PF04565 RNA polymerase Rpb2, domain 3 N16961_VC02528 PF10385 RNA polymerase beta subunit external 1 domain N16961_VC02530 PF00542 Ribosomal protein L7/L12 C-terminal domain N16961_VC02530 PF16320 N16961_VC02530 N16961_VC02531 PF00466 Ribosomal protein L10 N16961_VC02532 PF00687 Ribosomal protein L1p/L10e family N16961_VC02533 PF00298 Ribosomal protein L11, RNA binding domain N16961_VC02533 PF03946 Ribosomal protein L11, N-terminal domain N16961_VC02534 PF00467 KOW motif N16961_VC02534 PF02357 Transcription termination factor nusG N16961_VC02535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N16961_VC02536 PF00009 Elongation factor Tu GTP binding domain N16961_VC02536 PF03143 Elongation factor Tu C-terminal domain N16961_VC02536 PF03144 Elongation factor Tu domain 2 N16961_VC02541 PF00485 Phosphoribulokinase / Uridine kinase family N16961_VC02542 PF02237 Biotin protein ligase C terminal domain N16961_VC02542 PF03099 Biotin/lipoate A/B protein ligase family N16961_VC02542 PF08279 HTH domain N16961_VC02543 PF01565 FAD binding domain N16961_VC02543 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N16961_VC02544 PF13508 Acetyltransferase (GNAT) domain N16961_VC02545 PF13091 PLD-like domain N16961_VC02551 PF00175 Oxidoreductase NAD-binding domain N16961_VC02551 PF00970 Oxidoreductase FAD-binding domain N16961_VC02552 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VC02553 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N16961_VC02555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_VC02555 PF07497 Rho termination factor, RNA-binding domain N16961_VC02555 PF07498 Rho termination factor, N-terminal domain N16961_VC02556 PF00085 Thioredoxin N16961_VC02557 PF00270 DEAD/DEAH box helicase N16961_VC02557 PF00271 Helicase conserved C-terminal domain N16961_VC02558 PF02541 Ppx/GppA phosphatase family N16961_VC02559 PF00072 Response regulator receiver domain N16961_VC02559 PF00512 His Kinase A (phospho-acceptor) domain N16961_VC02559 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VC02559 PF12860 N16961_VC02559 N16961_VC02560 PF12832 MFS_1 like family N16961_VC02561 PF00027 Cyclic nucleotide-binding domain N16961_VC02561 PF03445 N16961_VC02561 N16961_VC02561 PF10335 N16961_VC02561 N16961_VC02562 PF00929 Exonuclease N16961_VC02563 PF00501 AMP-binding enzyme N16961_VC02563 PF13193 AMP-binding enzyme C-terminal domain N16961_VC02563 PF16177 N16961_VC02563 N16961_VC02564 PF01220 Dehydroquinase class II N16961_VC02565 PF00364 Biotin-requiring enzyme N16961_VC02566 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain N16961_VC02566 PF02785 Biotin carboxylase C-terminal domain N16961_VC02566 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N16961_VC02567 PF06325 Ribosomal protein L11 methyltransferase (PrmA) N16961_VC02568 PF01207 Dihydrouridine synthase (Dus) N16961_VC02569 PF02954 Bacterial regulatory protein, Fis family N16961_VC02570 PF00356 Bacterial regulatory proteins, lacI family N16961_VC02570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_VC02571 PF00920 Dehydratase family N16961_VC02572 PF01202 Shikimate kinase N16961_VC02573 PF02447 N16961_VC02573 N16961_VC02574 PF01081 KDPG and KHG aldolase N16961_VC02575 PF00593 TonB dependent receptor N16961_VC02575 PF07715 TonB-dependent Receptor Plug Domain N16961_VC02576 PF00593 TonB dependent receptor N16961_VC02577 PF16357 N16961_VC02577 N16961_VC02578 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02578 PF00672 HAMP domain N16961_VC02578 PF17200 N16961_VC02578 N16961_VC02579 PF01276 Orn/Lys/Arg decarboxylase, major domain N16961_VC02579 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N16961_VC02579 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N16961_VC02580 PF13520 Amino acid permease N16961_VC02581 PF00486 Transcriptional regulatory protein, C terminal N16961_VC02582 PF13411 MerR HTH family regulatory protein N16961_VC02583 PF01808 AICARFT/IMPCHase bienzyme N16961_VC02583 PF02142 MGS-like domain N16961_VC02584 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N16961_VC02584 PF02843 Phosphoribosylglycinamide synthetase, C domain N16961_VC02584 PF02844 Phosphoribosylglycinamide synthetase, N domain N16961_VC02585 PF07356 N16961_VC02585 N16961_VC02586 PF00216 Bacterial DNA-binding protein N16961_VC02588 PF00571 CBS domain N16961_VC02588 PF01595 N16961_VC02588 N16961_VC02589 PF00480 ROK family N16961_VC02590 PF01238 Phosphomannose isomerase type I N16961_VC02591 PF04222 Protein of unknown function (DUF416) N16961_VC02592 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VC02593 PF03167 Uracil DNA glycosylase superfamily N16961_VC02594 PF00924 Mechanosensitive ion channel N16961_VC02595 PF00753 Metallo-beta-lactamase superfamily N16961_VC02595 PF07521 RNA-metabolising metallo-beta-lactamase N16961_VC02595 PF10996 Beta-Casp domain N16961_VC02596 PF02397 N16961_VC02596 N16961_VC02597 PF01370 NAD dependent epimerase/dehydratase family N16961_VC02598 PF02719 Polysaccharide biosynthesis protein N16961_VC02599 PF00534 Glycosyl transferases group 1 N16961_VC02599 PF13439 Glycosyltransferase Family 4 N16961_VC02600 PF05575 N16961_VC02600 N16961_VC02601 PF00665 Integrase core domain N16961_VC02602 PF01527 Transposase N16961_VC02603 PF05575 N16961_VC02603 N16961_VC02604 PF01609 Transposase DDE domain N16961_VC02605 PF13808 N16961_VC02605 N16961_VC02606 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC02607 PF04443 N16961_VC02607 N16961_VC02607 PF05893 Acyl-CoA reductase (LuxC) N16961_VC02608 PF00465 Iron-containing alcohol dehydrogenase N16961_VC02609 PF00501 AMP-binding enzyme N16961_VC02609 PF13193 AMP-binding enzyme C-terminal domain N16961_VC02610 PF00550 Phosphopantetheine attachment site N16961_VC02611 PF00005 ABC transporter N16961_VC02612 PF01061 N16961_VC02612 N16961_VC02613 PF00534 Glycosyl transferases group 1 N16961_VC02614 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N16961_VC02615 PF16363 N16961_VC02615 N16961_VC02616 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VC02616 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VC02616 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VC02616 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VC02617 PF00483 Nucleotidyl transferase N16961_VC02617 PF01050 Mannose-6-phosphate isomerase N16961_VC02618 PF01370 NAD dependent epimerase/dehydratase family N16961_VC02619 PF01522 Polysaccharide deacetylase N16961_VC02619 PF13439 Glycosyltransferase Family 4 N16961_VC02620 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC02621 PF04932 N16961_VC02621 N16961_VC02622 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_VC02623 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_VC02624 PF04488 Glycosyltransferase sugar-binding region containing DXD motif N16961_VC02625 PF00534 Glycosyl transferases group 1 N16961_VC02625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N16961_VC02626 PF08282 haloacid dehalogenase-like hydrolase N16961_VC02629 PF07507 N16961_VC02629 N16961_VC02630 PF07507 N16961_VC02630 N16961_VC02631 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family N16961_VC02632 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_VC02633 PF00535 Glycosyl transferase family 2 N16961_VC02634 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_VC02635 PF01467 Cytidylyltransferase N16961_VC02636 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N16961_VC02636 PF06827 Zinc finger found in FPG and IleRS N16961_VC02636 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N16961_VC02638 PF00471 Ribosomal protein L33 N16961_VC02639 PF00830 Ribosomal L28 family N16961_VC02640 PF04002 RadC-like JAB domain N16961_VC02641 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VC02641 PF00672 HAMP domain N16961_VC02641 PF17200 N16961_VC02641 N16961_VC02642 PF02441 Flavoprotein N16961_VC02642 PF04127 DNA / pantothenate metabolism flavoprotein N16961_VC02643 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02644 PF03279 N16961_VC02644 N16961_VC02645 PF03279 N16961_VC02645 N16961_VC02646 PF00156 Phosphoribosyl transferase domain N16961_VC02647 PF01138 3' exoribonuclease family, domain 1 N16961_VC02647 PF03725 3' exoribonuclease family, domain 2 N16961_VC02648 PF03755 N16961_VC02648 N16961_VC02648 PF08340 N16961_VC02648 N16961_VC02649 PF03350 N16961_VC02649 N16961_VC02650 PF00367 phosphotransferase system, EIIB N16961_VC02650 PF02378 Phosphotransferase system, EIIC N16961_VC02651 PF13580 SIS domain N16961_VC02652 PF01380 SIS domain N16961_VC02652 PF01418 Helix-turn-helix domain, rpiR family N16961_VC02653 PF01032 FecCD transport family N16961_VC02654 PF01497 Periplasmic binding protein N16961_VC02655 PF00005 ABC transporter N16961_VC02656 PF00593 TonB dependent receptor N16961_VC02656 PF07715 TonB-dependent Receptor Plug Domain N16961_VC02657 PF00005 ABC transporter N16961_VC02657 PF00664 ABC transporter transmembrane region N16961_VC02659 PF12305 N16961_VC02659 N16961_VC02660 PF00270 DEAD/DEAH box helicase N16961_VC02660 PF00271 Helicase conserved C-terminal domain N16961_VC02660 PF00570 HRDC domain N16961_VC02660 PF09382 RQC domain N16961_VC02660 PF16124 N16961_VC02660 N16961_VC02661 PF00892 EamA-like transporter family N16961_VC02662 PF01019 Gamma-glutamyltranspeptidase N16961_VC02663 PF02311 AraC-like ligand binding domain N16961_VC02663 PF12833 Helix-turn-helix domain N16961_VC02664 PF01810 N16961_VC02664 N16961_VC02666 PF00580 UvrD/REP helicase N-terminal domain N16961_VC02666 PF13361 UvrD-like helicase C-terminal domain N16961_VC02667 PF01432 Peptidase family M3 N16961_VC02668 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ N16961_VC02669 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VC02669 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VC02670 PF00589 Phage integrase family N16961_VC02674 PF14464 Prokaryotic homologs of the JAB domain N16961_VC02675 PF00899 ThiF family N16961_VC02675 PF14461 Prokaryotic E2 family B N16961_VC02677 PF01734 Patatin-like phospholipase N16961_VC02680 PF12844 Helix-turn-helix domain N16961_VC02682 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VC02683 PF05036 Sporulation related domain N16961_VC02684 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02684 PF12911 N16961_VC02684 N16961_VC02685 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02686 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VC02687 PF00005 ABC transporter N16961_VC02687 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VC02693 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N16961_VC02694 PF00580 UvrD/REP helicase N-terminal domain N16961_VC02694 PF13361 UvrD-like helicase C-terminal domain N16961_VC02695 PF00440 Bacterial regulatory proteins, tetR family N16961_VC02696 PF16576 N16961_VC02696 N16961_VC02697 PF00873 AcrB/AcrD/AcrF family N16961_VC02698 PF04380 N16961_VC02698 N16961_VC02699 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N16961_VC02699 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain N16961_VC02700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02700 PF03466 LysR substrate binding domain N16961_VC02707 PF12724 Flavodoxin domain N16961_VC02708 PF02386 Cation transport protein N16961_VC02709 PF01205 Uncharacterized protein family UPF0029 N16961_VC02709 PF09186 Domain of unknown function (DUF1949) N16961_VC02710 PF00378 Enoyl-CoA hydratase/isomerase family N16961_VC02710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N16961_VC02710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N16961_VC02711 PF00108 Thiolase, N-terminal domain N16961_VC02711 PF02803 Thiolase, C-terminal domain N16961_VC02712 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VC02712 PF03466 LysR substrate binding domain N16961_VC02713 PF07690 Major Facilitator Superfamily N16961_VC02714 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VC02714 PF12804 MobA-like NTP transferase domain N16961_VC02715 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain N16961_VC02715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N16961_VC02716 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_VC02716 PF02874 ATP synthase alpha/beta family, beta-barrel domain N16961_VC02717 PF00231 ATP synthase N16961_VC02718 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_VC02718 PF00306 ATP synthase alpha/beta chain, C terminal domain N16961_VC02718 PF02874 ATP synthase alpha/beta family, beta-barrel domain N16961_VC02719 PF00213 ATP synthase delta (OSCP) subunit N16961_VC02720 PF00430 ATP synthase B/B' CF(0) N16961_VC02721 PF00137 ATP synthase subunit C N16961_VC02722 PF00119 ATP synthase A chain N16961_VC02723 PF03899 N16961_VC02723 N16961_VC02724 PF02195 ParB-like nuclease domain N16961_VC02725 PF13614 AAA domain N16961_VC02726 PF02527 rRNA small subunit methyltransferase G N16961_VC02727 PF01134 Glucose inhibited division protein A N16961_VC02727 PF13932 GidA associated domain 3 N16961_VC02728 PF00258 Flavodoxin N16961_VC02729 PF01926 50S ribosome-binding GTPase N16961_VC02729 PF10396 GTP-binding protein TrmE N-terminus N16961_VC02729 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE N16961_VC02730 PF02096 60Kd inner membrane protein N16961_VC02730 PF14849 YidC periplasmic domain N16961_VC02731 PF00825 Ribonuclease P N16961_VC02732 PF00468 Ribosomal protein L34 N16961_VC02733 PF00005 ABC transporter N16961_VC02734 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VC02735 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA02736 PF02195 ParB-like nuclease domain N16961_VCA02738 PF13614 AAA domain N16961_VCA02739 PF11826 N16961_VCA02739 N16961_VCA02742 PF11686 N16961_VCA02742 N16961_VCA02743 PF01709 Transcriptional regulator N16961_VCA02744 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N16961_VCA02744 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N16961_VCA02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02745 PF17200 N16961_VCA02745 N16961_VCA02746 PF10928 Protein of unknown function (DUF2810) N16961_VCA02747 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA02748 PF00343 Carbohydrate phosphorylase N16961_VCA02749 PF02446 4-alpha-glucanotransferase N16961_VCA02750 PF00128 Alpha amylase, catalytic domain N16961_VCA02750 PF02806 Alpha amylase, C-terminal all-beta domain N16961_VCA02750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N16961_VCA02751 PF05638 Protein of unknown function (DUF796) N16961_VCA02752 PF05954 Phage late control gene D protein (GPD) N16961_VCA02753 PF13503 N16961_VCA02753 N16961_VCA02759 PF01124 MAPEG family N16961_VCA02760 PF01757 N16961_VCA02760 N16961_VCA02761 PF03547 N16961_VCA02761 N16961_VCA02762 PF00939 Sodium:sulfate symporter transmembrane region N16961_VCA02763 PF09829 N16961_VCA02763 N16961_VCA02764 PF00704 Glycosyl hydrolases family 18 N16961_VCA02764 PF02010 N16961_VCA02764 N16961_VCA02764 PF08329 Chitinase A, N-terminal domain N16961_VCA02766 PF01614 Bacterial transcriptional regulator N16961_VCA02766 PF09339 IclR helix-turn-helix domain N16961_VCA02767 PF00491 Arginase family N16961_VCA02768 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02770 PF05787 Bacterial protein of unknown function (DUF839) N16961_VCA02771 PF08668 HDOD domain N16961_VCA02772 PF01569 PAP2 superfamily N16961_VCA02773 PF00375 Sodium:dicarboxylate symporter family N16961_VCA02774 PF04314 Protein of unknown function (DUF461) N16961_VCA02775 PF02630 SCO1/SenC N16961_VCA02777 PF04018 N16961_VCA02777 N16961_VCA02779 PF03616 N16961_VCA02779 N16961_VCA02780 PF07238 PilZ domain N16961_VCA02780 PF12945 Flagellar protein YcgR N16961_VCA02781 PF14542 GCN5-related N-acetyl-transferase N16961_VCA02782 PF03572 Peptidase family S41 N16961_VCA02782 PF07676 WD40-like Beta Propeller Repeat N16961_VCA02782 PF14684 Tricorn protease C1 domain N16961_VCA02783 PF13533 Biotin-lipoyl like N16961_VCA02784 PF11742 N16961_VCA02784 N16961_VCA02785 PF00990 GGDEF domain N16961_VCA02788 PF01048 Phosphorylase superfamily N16961_VCA02789 PF04463 N16961_VCA02789 N16961_VCA02789 PF08349 N16961_VCA02789 N16961_VCA02790 PF13411 MerR HTH family regulatory protein N16961_VCA02791 PF00875 DNA photolyase N16961_VCA02791 PF03441 FAD binding domain of DNA photolyase N16961_VCA02792 PF01476 LysM domain N16961_VCA02792 PF03734 L,D-transpeptidase catalytic domain N16961_VCA02793 PF04728 Lipoprotein leucine-zipper N16961_VCA02794 PF00270 DEAD/DEAH box helicase N16961_VCA02794 PF00271 Helicase conserved C-terminal domain N16961_VCA02795 PF00326 Prolyl oligopeptidase family N16961_VCA02795 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain N16961_VCA02796 PF00593 TonB dependent receptor N16961_VCA02796 PF07715 TonB-dependent Receptor Plug Domain N16961_VCA02797 PF01483 Proprotein convertase P-domain N16961_VCA02798 PF07603 N16961_VCA02798 N16961_VCA02799 PF07603 N16961_VCA02799 N16961_VCA02800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02800 PF00672 HAMP domain N16961_VCA02801 PF12849 PBP superfamily domain N16961_VCA02802 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA02803 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA02804 PF00005 ABC transporter N16961_VCA02805 PF00990 GGDEF domain N16961_VCA02806 PF00174 Oxidoreductase molybdopterin binding domain N16961_VCA02807 PF07670 Nucleoside recognition N16961_VCA02808 PF00916 N16961_VCA02808 N16961_VCA02808 PF01740 STAS domain N16961_VCA02810 PF01551 Peptidase family M23 N16961_VCA02810 PF04225 Opacity-associated protein A LysM-like domain N16961_VCA02811 PF00563 EAL domain N16961_VCA02811 PF00990 GGDEF domain N16961_VCA02813 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA02813 PF03466 LysR substrate binding domain N16961_VCA02814 PF07690 Major Facilitator Superfamily N16961_VCA02815 PF00376 MerR family regulatory protein N16961_VCA02815 PF09278 MerR, DNA binding N16961_VCA02816 PF07690 Major Facilitator Superfamily N16961_VCA02819 PF00375 Sodium:dicarboxylate symporter family N16961_VCA02820 PF00892 EamA-like transporter family N16961_VCA02821 PF02001 N16961_VCA02821 N16961_VCA02823 PF01638 HxlR-like helix-turn-helix N16961_VCA02825 PF01483 Proprotein convertase P-domain N16961_VCA02825 PF13582 Metallo-peptidase family M12B Reprolysin-like N16961_VCA02827 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N16961_VCA02828 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N16961_VCA02828 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N16961_VCA02829 PF00581 Rhodanese-like domain N16961_VCA02830 PF00563 EAL domain N16961_VCA02831 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA02832 PF00916 N16961_VCA02832 N16961_VCA02832 PF01740 STAS domain N16961_VCA02833 PF00849 RNA pseudouridylate synthase N16961_VCA02834 PF05488 PAAR motif N16961_VCA02836 PF05591 N16961_VCA02836 N16961_VCA02837 PF05943 N16961_VCA02837 N16961_VCA02838 PF04965 Gene 25-like lysozyme N16961_VCA02839 PF05947 N16961_VCA02839 N16961_VCA02840 PF06996 N16961_VCA02840 N16961_VCA02841 PF00498 FHA domain N16961_VCA02842 PF12790 Type VI secretion lipoprotein N16961_VCA02843 PF05936 N16961_VCA02843 N16961_VCA02844 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) N16961_VCA02845 PF00004 ATPase family associated with various cellular activities (AAA) N16961_VCA02845 PF02861 Clp amino terminal domain N16961_VCA02845 PF07724 AAA domain (Cdc48 subfamily) N16961_VCA02845 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_VCA02846 PF00158 Sigma-54 interaction domain N16961_VCA02846 PF02954 Bacterial regulatory protein, Fis family N16961_VCA02847 PF11319 N16961_VCA02847 N16961_VCA02848 PF06812 N16961_VCA02848 N16961_VCA02848 PF16989 N16961_VCA02848 N16961_VCA02849 PF06744 N16961_VCA02849 N16961_VCA02849 PF06761 N16961_VCA02849 N16961_VCA02849 PF14331 N16961_VCA02849 N16961_VCA02850 PF06812 N16961_VCA02850 N16961_VCA02851 PF01471 Putative peptidoglycan binding domain N16961_VCA02851 PF05954 Phage late control gene D protein (GPD) N16961_VCA02853 PF11216 N16961_VCA02853 N16961_VCA02854 PF05025 RbsD / FucU transport protein family N16961_VCA02855 PF00005 ABC transporter N16961_VCA02856 PF02653 N16961_VCA02856 N16961_VCA02857 PF13407 Periplasmic binding protein domain N16961_VCA02858 PF00294 pfkB family carbohydrate kinase N16961_VCA02859 PF00356 Bacterial regulatory proteins, lacI family N16961_VCA02859 PF13377 Periplasmic binding protein-like domain N16961_VCA02860 PF04973 N16961_VCA02860 N16961_VCA02861 PF01048 Phosphorylase superfamily N16961_VCA02862 PF00027 Cyclic nucleotide-binding domain N16961_VCA02863 PF03009 Glycerophosphoryl diester phosphodiesterase family N16961_VCA02864 PF07690 Major Facilitator Superfamily N16961_VCA02865 PF11777 N16961_VCA02865 N16961_VCA02866 PF02839 Carbohydrate binding domain N16961_VCA02866 PF03067 Chitin binding domain N16961_VCA02867 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA02867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA02867 PF13426 PAS domain N16961_VCA02868 PF00072 Response regulator receiver domain N16961_VCA02868 PF00158 Sigma-54 interaction domain N16961_VCA02868 PF02954 Bacterial regulatory protein, Fis family N16961_VCA02869 PF16868 N16961_VCA02869 N16961_VCA02870 PF06808 N16961_VCA02870 N16961_VCA02871 PF01266 FAD dependent oxidoreductase N16961_VCA02872 PF10462 Peptidase M66 N16961_VCA02872 PF12561 N16961_VCA02872 N16961_VCA02873 PF01327 Polypeptide deformylase N16961_VCA02874 PF01794 N16961_VCA02874 N16961_VCA02874 PF08022 N16961_VCA02874 N16961_VCA02875 PF03334 N16961_VCA02875 N16961_VCA02876 PF04066 N16961_VCA02876 N16961_VCA02877 PF01899 N16961_VCA02877 N16961_VCA02878 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains N16961_VCA02879 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N16961_VCA02880 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains N16961_VCA02880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N16961_VCA02880 PF04039 N16961_VCA02880 N16961_VCA02880 PF13244 N16961_VCA02880 N16961_VCA02882 PF00582 Universal stress protein family N16961_VCA02883 PF03222 Tryptophan/tyrosine permease family N16961_VCA02884 PF01212 Beta-eliminating lyase N16961_VCA02886 PF12843 N16961_VCA02886 N16961_VCA02887 PF03734 L,D-transpeptidase catalytic domain N16961_VCA02888 PF00990 GGDEF domain N16961_VCA02890 PF00313 'Cold-shock' DNA-binding domain N16961_VCA02891 PF04402 Protein of unknown function (DUF541) N16961_VCA02892 PF13584 N16961_VCA02892 N16961_VCA02893 PF13519 von Willebrand factor type A domain N16961_VCA02894 PF00092 von Willebrand factor type A domain N16961_VCA02895 PF14316 N16961_VCA02895 N16961_VCA02896 PF01882 N16961_VCA02896 N16961_VCA02897 PF07726 ATPase family associated with various cellular activities (AAA) N16961_VCA02898 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02898 PF00672 HAMP domain N16961_VCA02900 PF01323 DSBA-like thioredoxin domain N16961_VCA02901 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_VCA02901 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_VCA02901 PF07670 Nucleoside recognition N16961_VCA02902 PF01546 Peptidase family M20/M25/M40 N16961_VCA02902 PF07687 Peptidase dimerisation domain N16961_VCA02903 PF00924 Mechanosensitive ion channel N16961_VCA02904 PF00158 Sigma-54 interaction domain N16961_VCA02904 PF01590 GAF domain N16961_VCA02905 PF00042 Globin N16961_VCA02905 PF00175 Oxidoreductase NAD-binding domain N16961_VCA02905 PF00970 Oxidoreductase FAD-binding domain N16961_VCA02907 PF00313 'Cold-shock' DNA-binding domain N16961_VCA02908 PF03889 N16961_VCA02908 N16961_VCA02911 PF00072 Response regulator receiver domain N16961_VCA02912 PF00989 PAS fold N16961_VCA02913 PF01256 Carbohydrate kinase N16961_VCA02913 PF03853 YjeF-related protein N-terminus N16961_VCA02914 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VCA02914 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VCA02915 PF03553 N16961_VCA02915 N16961_VCA02916 PF07885 Ion channel N16961_VCA02917 PF13505 Outer membrane protein beta-barrel domain N16961_VCA02918 PF00478 IMP dehydrogenase / GMP reductase domain N16961_VCA02919 PF00145 C-5 cytosine-specific DNA methylase N16961_VCA02920 PF03235 N16961_VCA02920 N16961_VCA02921 PF12476 N16961_VCA02921 N16961_VCA02921 PF13304 AAA domain N16961_VCA02923 PF01797 Transposase IS200 like N16961_VCA02924 PF00270 DEAD/DEAH box helicase N16961_VCA02924 PF00271 Helicase conserved C-terminal domain N16961_VCA02925 PF03605 N16961_VCA02925 N16961_VCA02926 PF02540 NAD synthase N16961_VCA02927 PF01467 Cytidylyltransferase N16961_VCA02929 PF00072 Response regulator receiver domain N16961_VCA02929 PF11849 N16961_VCA02929 N16961_VCA02929 PF13487 HD domain N16961_VCA02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA02930 PF17149 N16961_VCA02930 N16961_VCA02932 PF03553 N16961_VCA02932 N16961_VCA02934 PF07690 Major Facilitator Superfamily N16961_VCA02935 PF00990 GGDEF domain N16961_VCA02936 PF00657 GDSL-like Lipase/Acylhydrolase N16961_VCA02937 PF07968 Leukocidin/Hemolysin toxin family N16961_VCA02937 PF12563 Hemolytic toxin N terminal N16961_VCA02937 PF16458 N16961_VCA02937 N16961_VCA02938 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02938 PF12729 N16961_VCA02938 N16961_VCA02939 PF00561 alpha/beta hydrolase fold N16961_VCA02940 PF03280 Proteobacterial lipase chaperone protein N16961_VCA02941 PF00801 PKD domain N16961_VCA02941 PF05547 N16961_VCA02941 N16961_VCA02943 PF13230 Glutamine amidotransferases class-II N16961_VCA02944 PF01497 Periplasmic binding protein N16961_VCA02945 PF01032 FecCD transport family N16961_VCA02946 PF01032 FecCD transport family N16961_VCA02947 PF00005 ABC transporter N16961_VCA02948 PF12833 Helix-turn-helix domain N16961_VCA02949 PF00593 TonB dependent receptor N16961_VCA02949 PF07715 TonB-dependent Receptor Plug Domain N16961_VCA02950 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) N16961_VCA02951 PF00871 Acetokinase family N16961_VCA02954 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA02954 PF00672 HAMP domain N16961_VCA02954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA02955 PF00072 Response regulator receiver domain N16961_VCA02955 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA02957 PF01261 Xylose isomerase-like TIM barrel N16961_VCA02958 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N16961_VCA02959 PF08282 haloacid dehalogenase-like hydrolase N16961_VCA02960 PF00596 Class II Aldolase and Adducin N-terminal domain N16961_VCA02961 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VCA02962 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VCA02962 PF03611 N16961_VCA02962 N16961_VCA02963 PF00455 N16961_VCA02963 N16961_VCA02963 PF08220 DeoR-like helix-turn-helix domain N16961_VCA02964 PF13483 Beta-lactamase superfamily domain N16961_VCA02965 PF01292 Prokaryotic cytochrome b561 N16961_VCA02966 PF00128 Alpha amylase, catalytic domain N16961_VCA02967 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VCA02968 PF11308 N16961_VCA02968 N16961_VCA02969 PF11308 N16961_VCA02969 N16961_VCA02970 PF11060 N16961_VCA02970 N16961_VCA02971 PF00072 Response regulator receiver domain N16961_VCA02971 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA02972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA02972 PF11884 Domain of unknown function (DUF3404) N16961_VCA02973 PF07883 Cupin domain N16961_VCA02976 PF13508 Acetyltransferase (GNAT) domain N16961_VCA02977 PF13411 MerR HTH family regulatory protein N16961_VCA02977 PF13649 Methyltransferase domain N16961_VCA02979 PF12833 Helix-turn-helix domain N16961_VCA02980 PF07690 Major Facilitator Superfamily N16961_VCA02981 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA02981 PF00672 HAMP domain N16961_VCA02981 PF02743 Cache domain N16961_VCA02982 PF00282 Pyridoxal-dependent decarboxylase conserved domain N16961_VCA02983 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_VCA02983 PF07943 Penicillin-binding protein 5, C-terminal domain N16961_VCA02986 PF00194 Eukaryotic-type carbonic anhydrase N16961_VCA02987 PF01797 Transposase IS200 like N16961_VCA02988 PF02347 Glycine cleavage system P-protein N16961_VCA02989 PF01597 Glycine cleavage H-protein N16961_VCA02990 PF00464 Serine hydroxymethyltransferase N16961_VCA02991 PF01381 Helix-turn-helix N16961_VCA02991 PF07883 Cupin domain N16961_VCA02992 PF01571 Aminomethyltransferase folate-binding domain N16961_VCA02992 PF08669 Glycine cleavage T-protein C-terminal barrel domain N16961_VCA02993 PF00589 Phage integrase family N16961_VCA02993 PF13356 Domain of unknown function (DUF4102) N16961_VCA02994 PF01609 Transposase DDE domain N16961_VCA02994 PF05598 N16961_VCA02994 N16961_VCA02996 PF05488 PAAR motif N16961_VCA02999 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_VCA02999 PF02824 TGS domain N16961_VCA02999 PF03129 Anticodon binding domain N16961_VCA02999 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N16961_VCA03000 PF00707 Translation initiation factor IF-3, C-terminal domain N16961_VCA03000 PF05198 Translation initiation factor IF-3, N-terminal domain N16961_VCA03001 PF01632 Ribosomal protein L35 N16961_VCA03002 PF00453 Ribosomal protein L20 N16961_VCA03003 PF00589 Phage integrase family N16961_VCA03003 PF13495 Phage integrase, N-terminal SAM-like domain N16961_VCA03008 PF10985 N16961_VCA03008 N16961_VCA03010 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VCA03011 PF13561 Enoyl-(Acyl carrier protein) reductase N16961_VCA03013 PF01844 HNH endonuclease N16961_VCA03014 PF01966 HD domain N16961_VCA03014 PF13286 Phosphohydrolase-associated domain N16961_VCA03015 PF01844 HNH endonuclease N16961_VCA03017 PF05016 Plasmid stabilisation system protein N16961_VCA03018 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system N16961_VCA03019 PF00293 NUDIX domain N16961_VCA03020 PF06945 N16961_VCA03020 N16961_VCA03021 PF13302 Acetyltransferase (GNAT) domain N16961_VCA03022 PF08212 Lipocalin-like domain N16961_VCA03023 PF13673 Acetyltransferase (GNAT) domain N16961_VCA03024 PF08681 Protein of unknown function (DUF1778) N16961_VCA03026 PF15738 N16961_VCA03026 N16961_VCA03027 PF04221 RelB antitoxin N16961_VCA03028 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03029 PF10985 N16961_VCA03029 N16961_VCA03031 PF02566 OsmC-like protein N16961_VCA03035 PF02016 LD-carboxypeptidase N16961_VCA03036 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03038 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03040 PF10985 N16961_VCA03040 N16961_VCA03042 PF07081 Protein of unknown function (DUF1349) N16961_VCA03043 PF04970 Lecithin retinol acyltransferase N16961_VCA03044 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03045 PF05016 Plasmid stabilisation system protein N16961_VCA03046 PF04221 RelB antitoxin N16961_VCA03047 PF08212 Lipocalin-like domain N16961_VCA03049 PF04229 GrpB protein N16961_VCA03050 PF01810 N16961_VCA03050 N16961_VCA03053 PF11948 N16961_VCA03053 N16961_VCA03054 PF05016 Plasmid stabilisation system protein N16961_VCA03055 PF03693 Uncharacterised protein family (UPF0156) N16961_VCA03061 PF04471 Restriction endonuclease N16961_VCA03065 PF00665 Integrase core domain N16961_VCA03066 PF01527 Transposase N16961_VCA03067 PF08847 N16961_VCA03067 N16961_VCA03067 PF14280 N16961_VCA03067 N16961_VCA03070 PF06042 Bacterial protein of unknown function (DUF925) N16961_VCA03071 PF13508 Acetyltransferase (GNAT) domain N16961_VCA03073 PF05016 Plasmid stabilisation system protein N16961_VCA03074 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system N16961_VCA03075 PF13420 Acetyltransferase (GNAT) domain N16961_VCA03077 PF05015 Plasmid maintenance system killer protein N16961_VCA03078 PF01381 Helix-turn-helix N16961_VCA03079 PF02567 Phenazine biosynthesis-like protein N16961_VCA03080 PF14355 N16961_VCA03080 N16961_VCA03084 PF00583 Acetyltransferase (GNAT) family N16961_VCA03085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03086 PF00583 Acetyltransferase (GNAT) family N16961_VCA03088 PF08212 Lipocalin-like domain N16961_VCA03093 PF11948 N16961_VCA03093 N16961_VCA03094 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03095 PF13302 Acetyltransferase (GNAT) domain N16961_VCA03098 PF13642 protein structure with unknown function N16961_VCA03100 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system N16961_VCA03101 PF05016 Plasmid stabilisation system protein N16961_VCA03102 PF11948 N16961_VCA03102 N16961_VCA03103 PF06945 N16961_VCA03103 N16961_VCA03105 PF13642 protein structure with unknown function N16961_VCA03107 PF11185 N16961_VCA03107 N16961_VCA03108 PF00583 Acetyltransferase (GNAT) family N16961_VCA03109 PF02016 LD-carboxypeptidase N16961_VCA03112 PF13673 Acetyltransferase (GNAT) domain N16961_VCA03113 PF08212 Lipocalin-like domain N16961_VCA03114 PF05016 Plasmid stabilisation system protein N16961_VCA03115 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system N16961_VCA03117 PF01555 DNA methylase N16961_VCA03119 PF11948 N16961_VCA03119 N16961_VCA03124 PF13531 Bacterial extracellular solute-binding protein N16961_VCA03126 PF01965 DJ-1/PfpI family N16961_VCA03128 PF10987 N16961_VCA03128 N16961_VCA03132 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03135 PF06945 N16961_VCA03135 N16961_VCA03137 PF06296 N16961_VCA03137 N16961_VCA03138 PF15731 N16961_VCA03138 N16961_VCA03139 PF13673 Acetyltransferase (GNAT) domain N16961_VCA03141 PF01609 Transposase DDE domain N16961_VCA03141 PF05598 N16961_VCA03141 N16961_VCA03143 PF13673 Acetyltransferase (GNAT) domain N16961_VCA03145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03146 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system N16961_VCA03147 PF05016 Plasmid stabilisation system protein N16961_VCA03148 PF00583 Acetyltransferase (GNAT) family N16961_VCA03149 PF13673 Acetyltransferase (GNAT) domain N16961_VCA03150 PF08681 Protein of unknown function (DUF1778) N16961_VCA03153 PF03819 MazG nucleotide pyrophosphohydrolase domain N16961_VCA03154 PF08681 Protein of unknown function (DUF1778) N16961_VCA03155 PF13508 Acetyltransferase (GNAT) domain N16961_VCA03156 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system N16961_VCA03157 PF05016 Plasmid stabilisation system protein N16961_VCA03158 PF07859 alpha/beta hydrolase fold N16961_VCA03161 PF01797 Transposase IS200 like N16961_VCA03163 PF12686 N16961_VCA03163 N16961_VCA03164 PF13417 Glutathione S-transferase, N-terminal domain N16961_VCA03165 PF13711 N16961_VCA03165 N16961_VCA03166 PF10387 Protein of unknown function (DUF2442) N16961_VCA03168 PF05016 Plasmid stabilisation system protein N16961_VCA03169 PF04221 RelB antitoxin N16961_VCA03170 PF00583 Acetyltransferase (GNAT) family N16961_VCA03171 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03173 PF01527 Transposase N16961_VCA03174 PF00665 Integrase core domain N16961_VCA03175 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase N16961_VCA03176 PF03477 ATP cone domain N16961_VCA03176 PF13597 Anaerobic ribonucleoside-triphosphate reductase N16961_VCA03177 PF13353 4Fe-4S single cluster domain N16961_VCA03178 PF00155 Aminotransferase class I and II N16961_VCA03179 PF05618 Putative ATP-dependant zinc protease N16961_VCA03180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VCA03180 PF02378 Phosphotransferase system, EIIC N16961_VCA03181 PF00294 pfkB family carbohydrate kinase N16961_VCA03182 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VCA03182 PF00381 PTS HPr component phosphorylation site N16961_VCA03183 PF00356 Bacterial regulatory proteins, lacI family N16961_VCA03183 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_VCA03184 PF00149 Calcineurin-like phosphoesterase N16961_VCA03184 PF12320 Type 5 capsule protein repressor C-terminal domain N16961_VCA03185 PF13476 AAA domain N16961_VCA03185 PF13558 Putative exonuclease SbcCD, C subunit N16961_VCA03186 PF00072 Response regulator receiver domain N16961_VCA03186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03187 PF00155 Aminotransferase class I and II N16961_VCA03188 PF03595 Voltage-dependent anion channel N16961_VCA03189 PF00654 Voltage gated chloride channel N16961_VCA03190 PF02492 CobW/HypB/UreG, nucleotide-binding domain N16961_VCA03191 PF01926 50S ribosome-binding GTPase N16961_VCA03192 PF02705 N16961_VCA03192 N16961_VCA03193 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase N16961_VCA03193 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg N16961_VCA03193 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_VCA03193 PF10371 Domain of unknown function N16961_VCA03193 PF12838 4Fe-4S dicluster domain N16961_VCA03193 PF17147 N16961_VCA03193 N16961_VCA03194 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03194 PF13493 Domain of unknown function (DUF4118) N16961_VCA03195 PF00072 Response regulator receiver domain N16961_VCA03195 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA03196 PF02416 mttA/Hcf106 family N16961_VCA03197 PF09335 N16961_VCA03197 N16961_VCA03199 PF00563 EAL domain N16961_VCA03201 PF01292 Prokaryotic cytochrome b561 N16961_VCA03202 PF04264 YceI-like domain N16961_VCA03203 PF00571 CBS domain N16961_VCA03203 PF01226 Formate/nitrite transporter N16961_VCA03204 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03204 PF03466 LysR substrate binding domain N16961_VCA03205 PF06496 N16961_VCA03205 N16961_VCA03206 PF11398 Protein of unknown function (DUF2813) N16961_VCA03207 PF00149 Calcineurin-like phosphoesterase N16961_VCA03207 PF02872 5'-nucleotidase, C-terminal domain N16961_VCA03209 PF03741 N16961_VCA03209 N16961_VCA03211 PF03831 PhnA protein N16961_VCA03211 PF08274 PhnA Zinc-Ribbon N16961_VCA03212 PF02163 Peptidase family M50 N16961_VCA03214 PF06934 N16961_VCA03214 N16961_VCA03215 PF07690 Major Facilitator Superfamily N16961_VCA03216 PF11810 N16961_VCA03216 N16961_VCA03217 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03217 PF00990 GGDEF domain N16961_VCA03219 PF01019 Gamma-glutamyltranspeptidase N16961_VCA03220 PF11557 N16961_VCA03220 N16961_VCA03221 PF00990 GGDEF domain N16961_VCA03222 PF10719 N16961_VCA03222 N16961_VCA03223 PF10115 N16961_VCA03223 N16961_VCA03224 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N16961_VCA03224 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N16961_VCA03224 PF12769 Domain of unknown function (DUF3814) N16961_VCA03225 PF02233 NAD(P) transhydrogenase beta subunit N16961_VCA03226 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03226 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03226 PF11884 Domain of unknown function (DUF3404) N16961_VCA03227 PF00072 Response regulator receiver domain N16961_VCA03227 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA03228 PF11060 N16961_VCA03228 N16961_VCA03229 PF13729 N16961_VCA03229 N16961_VCA03230 PF03701 N16961_VCA03230 N16961_VCA03231 PF01253 Translation initiation factor SUI1 N16961_VCA03232 PF11782 N16961_VCA03232 N16961_VCA03233 PF01820 D-ala D-ala ligase N-terminus N16961_VCA03233 PF07478 D-ala D-ala ligase C-terminus N16961_VCA03234 PF05036 Sporulation related domain N16961_VCA03235 PF00583 Acetyltransferase (GNAT) family N16961_VCA03235 PF13380 CoA binding domain N16961_VCA03235 PF13549 ATP-grasp domain N16961_VCA03235 PF13607 Succinyl-CoA ligase like flavodoxin domain N16961_VCA03236 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03236 PF03466 LysR substrate binding domain N16961_VCA03237 PF00593 TonB dependent receptor N16961_VCA03237 PF07715 TonB-dependent Receptor Plug Domain N16961_VCA03238 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VCA03238 PF12793 N16961_VCA03238 N16961_VCA03239 PF11869 N16961_VCA03239 N16961_VCA03240 PF03061 Thioesterase superfamily N16961_VCA03241 PF01435 Peptidase family M48 N16961_VCA03242 PF13275 S4 domain N16961_VCA03243 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03244 PF00043 Glutathione S-transferase, C-terminal domain N16961_VCA03244 PF02798 Glutathione S-transferase, N-terminal domain N16961_VCA03245 PF13410 Glutathione S-transferase, C-terminal domain N16961_VCA03245 PF13417 Glutathione S-transferase, N-terminal domain N16961_VCA03246 PF00440 Bacterial regulatory proteins, tetR family N16961_VCA03247 PF03479 Domain of unknown function (DUF296) N16961_VCA03248 PF00005 ABC transporter N16961_VCA03248 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VCA03249 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03249 PF12911 N16961_VCA03249 N16961_VCA03250 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03251 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VCA03252 PF00293 NUDIX domain N16961_VCA03254 PF03891 N16961_VCA03254 N16961_VCA03255 PF02698 DUF218 domain N16961_VCA03256 PF07690 Major Facilitator Superfamily N16961_VCA03257 PF00892 EamA-like transporter family N16961_VCA03258 PF00392 Bacterial regulatory proteins, gntR family N16961_VCA03258 PF07702 UTRA domain N16961_VCA03259 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03260 PF00005 ABC transporter N16961_VCA03261 PF13343 Bacterial extracellular solute-binding protein N16961_VCA03262 PF00266 Aminotransferase class-V N16961_VCA03263 PF00202 Aminotransferase class-III N16961_VCA03264 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA03265 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_VCA03265 PF14760 Rnk N-terminus N16961_VCA03266 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA03269 PF01741 Large-conductance mechanosensitive channel, MscL N16961_VCA03270 PF01268 Formate--tetrahydrofolate ligase N16961_VCA03271 PF01625 Peptide methionine sulfoxide reductase N16961_VCA03271 PF01641 SelR domain N16961_VCA03272 PF01227 GTP cyclohydrolase I N16961_VCA03273 PF00994 Probable molybdopterin binding domain N16961_VCA03273 PF03453 MoeA N-terminal region (domain I and II) N16961_VCA03273 PF03454 MoeA C-terminal region (domain IV) N16961_VCA03274 PF00899 ThiF family N16961_VCA03276 PF00581 Rhodanese-like domain N16961_VCA03277 PF04198 Putative sugar-binding domain N16961_VCA03278 PF00923 Transaldolase N16961_VCA03279 PF00456 Transketolase, thiamine diphosphate binding domain N16961_VCA03279 PF02779 Transketolase, pyrimidine binding domain N16961_VCA03279 PF02780 Transketolase, C-terminal domain N16961_VCA03280 PF00593 TonB dependent receptor N16961_VCA03280 PF07715 TonB-dependent Receptor Plug Domain N16961_VCA03281 PF00588 SpoU rRNA Methylase family N16961_VCA03282 PF02810 SEC-C motif N16961_VCA03282 PF08378 N16961_VCA03282 N16961_VCA03283 PF05145 N16961_VCA03283 N16961_VCA03284 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_VCA03284 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_VCA03285 PF13302 Acetyltransferase (GNAT) domain N16961_VCA03286 PF00293 NUDIX domain N16961_VCA03287 PF06942 N16961_VCA03287 N16961_VCA03288 PF12847 Methyltransferase domain N16961_VCA03289 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03289 PF03466 LysR substrate binding domain N16961_VCA03290 PF03992 Antibiotic biosynthesis monooxygenase N16961_VCA03291 PF00881 Nitroreductase family N16961_VCA03292 PF00873 AcrB/AcrD/AcrF family N16961_VCA03293 PF16576 N16961_VCA03293 N16961_VCA03295 PF04143 N16961_VCA03295 N16961_VCA03296 PF01022 Bacterial regulatory protein, arsR family N16961_VCA03297 PF11127 Protein of unknown function (DUF2892) N16961_VCA03298 PF00581 Rhodanese-like domain N16961_VCA03298 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_VCA03298 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_VCA03300 PF01553 Acyltransferase N16961_VCA03300 PF13444 Acetyltransferase (GNAT) domain N16961_VCA03301 PF04945 YHS domain N16961_VCA03302 PF05742 N16961_VCA03302 N16961_VCA03305 PF09335 N16961_VCA03305 N16961_VCA03306 PF11269 Protein of unknown function (DUF3069) N16961_VCA03307 PF00367 phosphotransferase system, EIIB N16961_VCA03307 PF02378 Phosphotransferase system, EIIC N16961_VCA03308 PF00356 Bacterial regulatory proteins, lacI family N16961_VCA03308 PF13377 Periplasmic binding protein-like domain N16961_VCA03309 PF00251 Glycosyl hydrolases family 32 N-terminal domain N16961_VCA03309 PF08244 Glycosyl hydrolases family 32 C terminal N16961_VCA03310 PF00294 pfkB family carbohydrate kinase N16961_VCA03311 PF01266 FAD dependent oxidoreductase N16961_VCA03311 PF16901 N16961_VCA03311 N16961_VCA03312 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03312 PF08447 PAS fold N16961_VCA03313 PF00691 OmpA family N16961_VCA03314 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_VCA03314 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_VCA03315 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA03316 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03317 PF03606 N16961_VCA03317 N16961_VCA03318 PF03313 N16961_VCA03318 N16961_VCA03318 PF03315 Serine dehydratase beta chain N16961_VCA03319 PF00474 Sodium:solute symporter family N16961_VCA03320 PF07690 Major Facilitator Superfamily N16961_VCA03321 PF12680 SnoaL-like domain N16961_VCA03323 PF00356 Bacterial regulatory proteins, lacI family N16961_VCA03323 PF13377 Periplasmic binding protein-like domain N16961_VCA03324 PF00072 Response regulator receiver domain N16961_VCA03324 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03325 PF00672 HAMP domain N16961_VCA03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03325 PF07730 Histidine kinase N16961_VCA03325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N16961_VCA03326 PF12838 4Fe-4S dicluster domain N16961_VCA03327 PF03927 NapD protein N16961_VCA03328 PF00384 Molybdopterin oxidoreductase N16961_VCA03328 PF01568 Molydopterin dinucleotide binding domain N16961_VCA03328 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N16961_VCA03329 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) N16961_VCA03330 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_VCA03331 PF09574 N16961_VCA03331 N16961_VCA03332 PF01966 HD domain N16961_VCA03333 PF00072 Response regulator receiver domain N16961_VCA03333 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03334 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03334 PF05231 N16961_VCA03334 N16961_VCA03334 PF07730 Histidine kinase N16961_VCA03335 PF07690 Major Facilitator Superfamily N16961_VCA03336 PF13343 Bacterial extracellular solute-binding protein N16961_VCA03337 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03338 PF00005 ABC transporter N16961_VCA03338 PF08402 TOBE domain N16961_VCA03339 PF07167 N16961_VCA03339 N16961_VCA03340 PF09361 N16961_VCA03340 N16961_VCA03341 PF00108 Thiolase, N-terminal domain N16961_VCA03341 PF02803 Thiolase, C-terminal domain N16961_VCA03342 PF13561 Enoyl-(Acyl carrier protein) reductase N16961_VCA03343 PF02355 Protein export membrane protein N16961_VCA03343 PF07549 SecD/SecF GG Motif N16961_VCA03344 PF02355 Protein export membrane protein N16961_VCA03344 PF07549 SecD/SecF GG Motif N16961_VCA03344 PF13721 SecD export protein N-terminal TM region N16961_VCA03347 PF00990 GGDEF domain N16961_VCA03347 PF13426 PAS domain N16961_VCA03348 PF00483 Nucleotidyl transferase N16961_VCA03349 PF00704 Glycosyl hydrolases family 18 N16961_VCA03349 PF06483 N16961_VCA03349 N16961_VCA03350 PF00465 Iron-containing alcohol dehydrogenase N16961_VCA03351 PF07947 N16961_VCA03351 N16961_VCA03352 PF00072 Response regulator receiver domain N16961_VCA03352 PF02954 Bacterial regulatory protein, Fis family N16961_VCA03352 PF14532 Sigma-54 interaction domain N16961_VCA03353 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03353 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03354 PF13343 Bacterial extracellular solute-binding protein N16961_VCA03355 PF07690 Major Facilitator Superfamily N16961_VCA03356 PF00224 Pyruvate kinase, barrel domain N16961_VCA03356 PF02887 Pyruvate kinase, alpha/beta domain N16961_VCA03357 PF00072 Response regulator receiver domain N16961_VCA03357 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03357 PF00672 HAMP domain N16961_VCA03357 PF01627 Hpt domain N16961_VCA03357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03358 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_VCA03359 PF02142 MGS-like domain N16961_VCA03360 PF00857 Isochorismatase family N16961_VCA03361 PF01219 Prokaryotic diacylglycerol kinase N16961_VCA03362 PF13670 N16961_VCA03362 N16961_VCA03363 PF01292 Prokaryotic cytochrome b561 N16961_VCA03364 PF00580 UvrD/REP helicase N-terminal domain N16961_VCA03364 PF12462 N16961_VCA03364 N16961_VCA03364 PF13361 UvrD-like helicase C-terminal domain N16961_VCA03365 PF12805 N16961_VCA03365 N16961_VCA03365 PF13515 N16961_VCA03365 N16961_VCA03366 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03367 PF07700 Heme NO binding N16961_VCA03370 PF00368 Hydroxymethylglutaryl-coenzyme A reductase N16961_VCA03371 PF00005 ABC transporter N16961_VCA03371 PF03459 TOBE domain N16961_VCA03372 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03373 PF13531 Bacterial extracellular solute-binding protein N16961_VCA03374 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N16961_VCA03374 PF07685 CobB/CobQ-like glutamine amidotransferase domain N16961_VCA03375 PF13175 AAA ATPase domain N16961_VCA03377 PF13289 N16961_VCA03377 N16961_VCA03379 PF04076 Bacterial OB fold (BOF) protein N16961_VCA03381 PF07238 PilZ domain N16961_VCA03381 PF12945 Flagellar protein YcgR N16961_VCA03382 PF00072 Response regulator receiver domain N16961_VCA03382 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03382 PF09308 LuxQ, periplasmic N16961_VCA03383 PF13407 Periplasmic binding protein domain N16961_VCA03384 PF13729 N16961_VCA03384 N16961_VCA03385 PF01541 GIY-YIG catalytic domain N16961_VCA03386 PF04337 Protein of unknown function, DUF480 N16961_VCA03388 PF04363 N16961_VCA03388 N16961_VCA03390 PF10688 N16961_VCA03390 N16961_VCA03391 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N16961_VCA03391 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N16961_VCA03392 PF00230 Major intrinsic protein N16961_VCA03395 PF01266 FAD dependent oxidoreductase N16961_VCA03395 PF04324 BFD-like [2Fe-2S] binding domain N16961_VCA03396 PF00890 FAD binding domain N16961_VCA03397 PF02754 N16961_VCA03397 N16961_VCA03397 PF13183 4Fe-4S dicluster domain N16961_VCA03398 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N16961_VCA03398 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N16961_VCA03399 PF00085 Thioredoxin N16961_VCA03400 PF07690 Major Facilitator Superfamily N16961_VCA03401 PF01764 Lipase (class 3) N16961_VCA03404 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03405 PF03466 LysR substrate binding domain N16961_VCA03406 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03407 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03408 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03409 PF00005 ABC transporter N16961_VCA03411 PF05762 VWA domain containing CoxE-like protein N16961_VCA03412 PF07728 AAA domain (dynein-related subfamily) N16961_VCA03412 PF12592 Protein of unknown function (DUF3763) N16961_VCA03413 PF00293 NUDIX domain N16961_VCA03414 PF01212 Beta-eliminating lyase N16961_VCA03415 PF00034 Cytochrome c N16961_VCA03416 PF00440 Bacterial regulatory proteins, tetR family N16961_VCA03417 PF00270 DEAD/DEAH box helicase N16961_VCA03417 PF00271 Helicase conserved C-terminal domain N16961_VCA03418 PF04336 N16961_VCA03418 N16961_VCA03420 PF03222 Tryptophan/tyrosine permease family N16961_VCA03421 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03422 PF16363 N16961_VCA03422 N16961_VCA03423 PF03746 LamB/YcsF family N16961_VCA03424 PF02682 Allophanate hydrolase subunit 1 N16961_VCA03425 PF02626 Allophanate hydrolase subunit 2 N16961_VCA03426 PF01266 FAD dependent oxidoreductase N16961_VCA03427 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N16961_VCA03427 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N16961_VCA03427 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N16961_VCA03428 PF02687 N16961_VCA03428 N16961_VCA03429 PF00005 ABC transporter N16961_VCA03430 PF13472 GDSL-like Lipase/Acylhydrolase family N16961_VCA03431 PF07055 Enoyl reductase FAD binding domain N16961_VCA03431 PF12241 Trans-2-enoyl-CoA reductase catalytic region N16961_VCA03431 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N16961_VCA03432 PF00563 EAL domain N16961_VCA03432 PF00990 GGDEF domain N16961_VCA03432 PF01590 GAF domain N16961_VCA03433 PF09818 Predicted ATPase of the ABC class N16961_VCA03434 PF00226 DnaJ domain N16961_VCA03434 PF12339 N16961_VCA03434 N16961_VCA03435 PF09997 N16961_VCA03435 N16961_VCA03437 PF00665 Integrase core domain N16961_VCA03438 PF01527 Transposase N16961_VCA03441 PF00239 Resolvase, N terminal domain N16961_VCA03441 PF13384 Homeodomain-like domain N16961_VCA03443 PF13419 Haloacid dehalogenase-like hydrolase N16961_VCA03445 PF05981 N16961_VCA03445 N16961_VCA03446 PF00294 pfkB family carbohydrate kinase N16961_VCA03447 PF00884 Sulfatase N16961_VCA03448 PF00089 Trypsin N16961_VCA03449 PF00270 DEAD/DEAH box helicase N16961_VCA03449 PF00271 Helicase conserved C-terminal domain N16961_VCA03449 PF03880 DbpA RNA binding domain N16961_VCA03450 PF00575 S1 RNA binding domain N16961_VCA03450 PF00773 RNB domain N16961_VCA03450 PF08206 Ribonuclease B OB domain N16961_VCA03451 PF11225 N16961_VCA03451 N16961_VCA03452 PF12727 PBP superfamily domain N16961_VCA03453 PF01575 MaoC like domain N16961_VCA03454 PF04244 Deoxyribodipyrimidine photo-lyase-related protein N16961_VCA03456 PF03067 Chitin binding domain N16961_VCA03457 PF13365 Trypsin-like peptidase domain N16961_VCA03458 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VCA03458 PF04389 Peptidase family M28 N16961_VCA03459 PF00491 Arginase family N16961_VCA03460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N16961_VCA03461 PF00924 Mechanosensitive ion channel N16961_VCA03462 PF01769 Divalent cation transporter N16961_VCA03462 PF03448 MgtE intracellular N domain N16961_VCA03463 PF00166 Chaperonin 10 Kd subunit N16961_VCA03464 PF00118 TCP-1/cpn60 chaperonin family N16961_VCA03466 PF00696 Amino acid kinase family N16961_VCA03467 PF06339 N16961_VCA03467 N16961_VCA03468 PF00202 Aminotransferase class-III N16961_VCA03469 PF00583 Acetyltransferase (GNAT) family N16961_VCA03471 PF01329 Pterin 4 alpha carbinolamine dehydratase N16961_VCA03472 PF00351 Biopterin-dependent aromatic amino acid hydroxylase N16961_VCA03473 PF00501 AMP-binding enzyme N16961_VCA03473 PF13193 AMP-binding enzyme C-terminal domain N16961_VCA03474 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03474 PF03466 LysR substrate binding domain N16961_VCA03476 PF13489 Methyltransferase domain N16961_VCA03477 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03477 PF03466 LysR substrate binding domain N16961_VCA03478 PF01545 Cation efflux family N16961_VCA03479 PF00892 EamA-like transporter family N16961_VCA03480 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_VCA03480 PF12464 Maltose acetyltransferase N16961_VCA03481 PF01595 N16961_VCA03481 N16961_VCA03481 PF03471 Transporter associated domain N16961_VCA03482 PF02566 OsmC-like protein N16961_VCA03484 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_VCA03485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_VCA03485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_VCA03487 PF01810 N16961_VCA03487 N16961_VCA03488 PF13520 Amino acid permease N16961_VCA03489 PF00990 GGDEF domain N16961_VCA03491 PF00072 Response regulator receiver domain N16961_VCA03491 PF04397 LytTr DNA-binding domain N16961_VCA03492 PF06580 N16961_VCA03492 N16961_VCA03494 PF17131 N16961_VCA03494 N16961_VCA03495 PF02687 N16961_VCA03495 N16961_VCA03495 PF12704 MacB-like periplasmic core domain N16961_VCA03496 PF00005 ABC transporter N16961_VCA03498 PF00248 Aldo/keto reductase family N16961_VCA03499 PF00128 Alpha amylase, catalytic domain N16961_VCA03500 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_VCA03501 PF12262 N16961_VCA03501 N16961_VCA03502 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03502 PF08447 PAS fold N16961_VCA03503 PF01447 Thermolysin metallopeptidase, catalytic domain N16961_VCA03503 PF02868 Thermolysin metallopeptidase, alpha-helical domain N16961_VCA03503 PF03413 Peptidase propeptide and YPEB domain N16961_VCA03503 PF04151 Bacterial pre-peptidase C-terminal domain N16961_VCA03503 PF07504 Fungalysin/Thermolysin Propeptide Motif N16961_VCA03504 PF03922 OmpW family N16961_VCA03506 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_VCA03507 PF00155 Aminotransferase class I and II N16961_VCA03507 PF00392 Bacterial regulatory proteins, gntR family N16961_VCA03508 PF01654 N16961_VCA03508 N16961_VCA03509 PF02322 N16961_VCA03509 N16961_VCA03510 PF08173 N16961_VCA03510 N16961_VCA03512 PF00291 Pyridoxal-phosphate dependent enzyme N16961_VCA03513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03513 PF03466 LysR substrate binding domain N16961_VCA03514 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family N16961_VCA03518 PF05791 Bacillus haemolytic enterotoxin (HBL) N16961_VCA03520 PF00107 Zinc-binding dehydrogenase N16961_VCA03520 PF08240 Alcohol dehydrogenase GroES-like domain N16961_VCA03521 PF00155 Aminotransferase class I and II N16961_VCA03524 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03524 PF03472 Autoinducer binding domain N16961_VCA03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03525 PF03466 LysR substrate binding domain N16961_VCA03526 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_VCA03527 PF03929 N16961_VCA03527 N16961_VCA03529 PF07361 Cytochrome b562 N16961_VCA03531 PF02743 Cache domain N16961_VCA03531 PF13487 HD domain N16961_VCA03532 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N16961_VCA03532 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N16961_VCA03533 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N16961_VCA03534 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N16961_VCA03534 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N16961_VCA03536 PF00753 Metallo-beta-lactamase superfamily N16961_VCA03537 PF01323 DSBA-like thioredoxin domain N16961_VCA03539 PF02595 Glycerate kinase family N16961_VCA03540 PF02447 N16961_VCA03540 N16961_VCA03541 PF05651 N16961_VCA03541 N16961_VCA03541 PF13556 PucR C-terminal helix-turn-helix domain N16961_VCA03542 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03543 PF01243 Pyridoxamine 5'-phosphate oxidase N16961_VCA03544 PF06228 Haem utilisation ChuX/HutX N16961_VCA03545 PF04055 Radical SAM superfamily N16961_VCA03546 PF03544 Gram-negative bacterial TonB protein C-terminal N16961_VCA03547 PF01618 N16961_VCA03547 N16961_VCA03548 PF02472 Biopolymer transport protein ExbD/TolR N16961_VCA03549 PF01497 Periplasmic binding protein N16961_VCA03550 PF01032 FecCD transport family N16961_VCA03551 PF00005 ABC transporter N16961_VCA03552 PF00440 Bacterial regulatory proteins, tetR family N16961_VCA03553 PF04175 Protein of unknown function (DUF406) N16961_VCA03555 PF01553 Acyltransferase N16961_VCA03557 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03557 PF00672 HAMP domain N16961_VCA03557 PF02743 Cache domain N16961_VCA03558 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_VCA03558 PF00175 Oxidoreductase NAD-binding domain N16961_VCA03558 PF00970 Oxidoreductase FAD-binding domain N16961_VCA03558 PF03473 MOSC domain N16961_VCA03558 PF03476 MOSC N-terminal beta barrel domain N16961_VCA03559 PF01979 Amidohydrolase family N16961_VCA03560 PF12833 Helix-turn-helix domain N16961_VCA03561 PF05656 N16961_VCA03561 N16961_VCA03563 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_VCA03564 PF05661 N16961_VCA03564 N16961_VCA03565 PF13487 HD domain N16961_VCA03567 PF00313 'Cold-shock' DNA-binding domain N16961_VCA03569 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N16961_VCA03570 PF12833 Helix-turn-helix domain N16961_VCA03571 PF00892 EamA-like transporter family N16961_VCA03572 PF00990 GGDEF domain N16961_VCA03572 PF08448 PAS fold N16961_VCA03573 PF00455 N16961_VCA03573 N16961_VCA03573 PF08220 DeoR-like helix-turn-helix domain N16961_VCA03574 PF03061 Thioesterase superfamily N16961_VCA03577 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03578 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03578 PF14785 Maltose transport system permease protein MalF P2 domain N16961_VCA03579 PF13416 Bacterial extracellular solute-binding protein N16961_VCA03580 PF00005 ABC transporter N16961_VCA03580 PF08402 TOBE domain N16961_VCA03581 PF13302 Acetyltransferase (GNAT) domain N16961_VCA03582 PF07073 Modulator of Rho-dependent transcription termination (ROF) N16961_VCA03583 PF13640 2OG-Fe(II) oxygenase superfamily N16961_VCA03584 PF01906 Putative heavy-metal-binding N16961_VCA03585 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03586 PF13616 PPIC-type PPIASE domain N16961_VCA03587 PF00072 Response regulator receiver domain N16961_VCA03587 PF01584 CheW-like domain N16961_VCA03588 PF12802 MarR family N16961_VCA03589 PF00990 GGDEF domain N16961_VCA03591 PF01381 Helix-turn-helix N16961_VCA03591 PF12268 N16961_VCA03591 N16961_VCA03593 PF00990 GGDEF domain N16961_VCA03593 PF03924 CHASE domain N16961_VCA03594 PF13532 2OG-Fe(II) oxygenase superfamily N16961_VCA03595 PF12060 N16961_VCA03595 N16961_VCA03596 PF00892 EamA-like transporter family N16961_VCA03597 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03597 PF03466 LysR substrate binding domain N16961_VCA03598 PF00990 GGDEF domain N16961_VCA03600 PF02678 Pirin N16961_VCA03600 PF05726 Pirin C-terminal cupin domain N16961_VCA03601 PF06865 Protein of unknown function (DUF1255) N16961_VCA03602 PF11012 N16961_VCA03602 N16961_VCA03603 PF07690 Major Facilitator Superfamily N16961_VCA03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03605 PF00672 HAMP domain N16961_VCA03606 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_VCA03606 PF13654 AAA domain N16961_VCA03608 PF00005 ABC transporter N16961_VCA03608 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_VCA03609 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03612 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03613 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03613 PF03466 LysR substrate binding domain N16961_VCA03614 PF02652 N16961_VCA03614 N16961_VCA03615 PF01070 FMN-dependent dehydrogenase N16961_VCA03616 PF01565 FAD binding domain N16961_VCA03616 PF02754 N16961_VCA03616 N16961_VCA03616 PF02913 FAD linked oxidases, C-terminal domain N16961_VCA03616 PF13183 4Fe-4S dicluster domain N16961_VCA03617 PF03618 N16961_VCA03617 N16961_VCA03618 PF00391 PEP-utilising enzyme, mobile domain N16961_VCA03618 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain N16961_VCA03618 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_VCA03619 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03619 PF08447 PAS fold N16961_VCA03620 PF01554 MatE N16961_VCA03621 PF00270 DEAD/DEAH box helicase N16961_VCA03621 PF00271 Helicase conserved C-terminal domain N16961_VCA03622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03622 PF03466 LysR substrate binding domain N16961_VCA03623 PF04399 Glutaredoxin 2, C terminal domain N16961_VCA03623 PF13417 Glutathione S-transferase, N-terminal domain N16961_VCA03624 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_VCA03625 PF02274 Amidinotransferase N16961_VCA03626 PF00005 ABC transporter N16961_VCA03626 PF00664 ABC transporter transmembrane region N16961_VCA03628 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_VCA03629 PF00440 Bacterial regulatory proteins, tetR family N16961_VCA03629 PF16925 N16961_VCA03629 N16961_VCA03630 PF01810 N16961_VCA03630 N16961_VCA03631 PF02311 AraC-like ligand binding domain N16961_VCA03631 PF12833 Helix-turn-helix domain N16961_VCA03632 PF03591 N16961_VCA03632 N16961_VCA03633 PF05437 N16961_VCA03633 N16961_VCA03634 PF01557 Fumarylacetoacetate (FAA) hydrolase family N16961_VCA03635 PF01047 MarR family N16961_VCA03636 PF02566 OsmC-like protein N16961_VCA03637 PF13609 Gram-negative porin N16961_VCA03638 PF00892 EamA-like transporter family N16961_VCA03639 PF00462 Glutaredoxin N16961_VCA03640 PF07670 Nucleoside recognition N16961_VCA03641 PF07670 Nucleoside recognition N16961_VCA03642 PF03600 Citrate transporter N16961_VCA03644 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N16961_VCA03645 PF02805 Metal binding domain of Ada N16961_VCA03645 PF06029 AlkA N-terminal domain N16961_VCA03645 PF12833 Helix-turn-helix domain N16961_VCA03646 PF07681 N16961_VCA03646 N16961_VCA03647 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03647 PF03466 LysR substrate binding domain N16961_VCA03648 PF04219 N16961_VCA03648 N16961_VCA03649 PF05013 N-formylglutamate amidohydrolase N16961_VCA03649 PF08014 N16961_VCA03649 N16961_VCA03650 PF11280 N16961_VCA03650 N16961_VCA03651 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N16961_VCA03652 PF08238 Sel1 repeat N16961_VCA03653 PF07148 N16961_VCA03653 N16961_VCA03654 PF02264 LamB porin N16961_VCA03655 PF00128 Alpha amylase, catalytic domain N16961_VCA03655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N16961_VCA03656 PF11212 N16961_VCA03656 N16961_VCA03657 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03657 PF12729 N16961_VCA03657 N16961_VCA03659 PF01547 Bacterial extracellular solute-binding protein N16961_VCA03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03660 PF12729 N16961_VCA03660 N16961_VCA03661 PF11730 N16961_VCA03661 N16961_VCA03662 PF00793 DAHP synthetase I family N16961_VCA03663 PF00005 ABC transporter N16961_VCA03664 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03665 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_VCA03666 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03667 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_VCA03667 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_VCA03667 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_VCA03667 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_VCA03668 PF01551 Peptidase family M23 N16961_VCA03671 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_VCA03671 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_VCA03671 PF02378 Phosphotransferase system, EIIC N16961_VCA03672 PF01232 Mannitol dehydrogenase Rossmann domain N16961_VCA03672 PF08125 Mannitol dehydrogenase C-terminal domain N16961_VCA03673 PF05068 Mannitol repressor N16961_VCA03674 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N16961_VCA03675 PF00753 Metallo-beta-lactamase superfamily N16961_VCA03677 PF03733 N16961_VCA03677 N16961_VCA03678 PF01925 N16961_VCA03678 N16961_VCA03679 PF00581 Rhodanese-like domain N16961_VCA03680 PF13460 NADH(P)-binding N16961_VCA03681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03681 PF03466 LysR substrate binding domain N16961_VCA03682 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03682 PF00672 HAMP domain N16961_VCA03683 PF00106 short chain dehydrogenase N16961_VCA03684 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_VCA03684 PF03466 LysR substrate binding domain N16961_VCA03685 PF04013 Putative SAM-dependent RNA methyltransferase N16961_VCA03686 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N16961_VCA03688 PF13520 Amino acid permease N16961_VCA03689 PF01276 Orn/Lys/Arg decarboxylase, major domain N16961_VCA03689 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N16961_VCA03689 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N16961_VCA03690 PF00171 Aldehyde dehydrogenase family N16961_VCA03691 PF01037 AsnC family N16961_VCA03691 PF13412 Winged helix-turn-helix DNA-binding N16961_VCA03692 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03692 PF00672 HAMP domain N16961_VCA03692 PF02743 Cache domain N16961_VCA03694 PF00474 Sodium:solute symporter family N16961_VCA03696 PF00171 Aldehyde dehydrogenase family N16961_VCA03696 PF01619 Proline dehydrogenase N16961_VCA03696 PF14850 DNA-binding domain of Proline dehydrogenase N16961_VCA03697 PF02311 AraC-like ligand binding domain N16961_VCA03697 PF12833 Helix-turn-helix domain N16961_VCA03698 PF08308 N16961_VCA03698 N16961_VCA03699 PF03781 Sulfatase-modifying factor enzyme 1 N16961_VCA03699 PF08308 N16961_VCA03699 N16961_VCA03700 PF00196 Bacterial regulatory proteins, luxR family N16961_VCA03700 PF08448 PAS fold N16961_VCA03701 PF01243 Pyridoxamine 5'-phosphate oxidase N16961_VCA03701 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N16961_VCA03702 PF02321 Outer membrane efflux protein N16961_VCA03702 PF13437 HlyD family secretion protein N16961_VCA03702 PF13533 Biotin-lipoyl like N16961_VCA03703 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP N16961_VCA03704 PF00563 EAL domain N16961_VCA03704 PF00990 GGDEF domain N16961_VCA03704 PF16448 N16961_VCA03704 N16961_VCA03705 PF00005 ABC transporter N16961_VCA03705 PF00664 ABC transporter transmembrane region N16961_VCA03706 PF03961 N16961_VCA03706 N16961_VCA03707 PF00072 Response regulator receiver domain N16961_VCA03707 PF07228 Stage II sporulation protein E (SpoIIE) N16961_VCA03707 PF13581 Histidine kinase-like ATPase domain N16961_VCA03708 PF13466 STAS domain N16961_VCA03709 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03710 PF00072 Response regulator receiver domain N16961_VCA03710 PF01339 CheB methylesterase N16961_VCA03711 PF03975 CheD chemotactic sensory transduction N16961_VCA03712 PF01739 CheR methyltransferase, SAM binding domain N16961_VCA03712 PF03705 CheR methyltransferase, all-alpha domain N16961_VCA03713 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_VCA03713 PF00672 HAMP domain N16961_VCA03713 PF13188 PAS domain N16961_VCA03713 PF13426 PAS domain N16961_VCA03714 PF01584 CheW-like domain N16961_VCA03715 PF01584 CheW-like domain N16961_VCA03716 PF01584 CheW-like domain N16961_VCA03716 PF01627 Hpt domain N16961_VCA03716 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03716 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_VCA03717 PF00072 Response regulator receiver domain N16961_VCA03718 PF13466 STAS domain N16961_VCA03719 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_VCA03720 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03721 PF00528 Binding-protein-dependent transport system inner membrane component N16961_VCA03722 PF00005 ABC transporter N16961_VCA03723 PF00884 Sulfatase N16961_VCA03723 PF08019 N16961_VCA03723 N16961_VCA03724 PF00512 His Kinase A (phospho-acceptor) domain N16961_VCA03724 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_VCA03724 PF08521 N16961_VCA03724 N16961_VCA03725 PF00072 Response regulator receiver domain N16961_VCA03725 PF00486 Transcriptional regulatory protein, C terminal N16961_VCA03726 PF14559 Tetratricopeptide repeat N16961_VCA03727 PF00106 short chain dehydrogenase N16961_VCA03728 PF14518 Iron-containing redox enzyme N16961_VCA03729 PF00501 AMP-binding enzyme N16961_VCA03730 PF12261 N16961_VCA03730 N16961_VCA03731 PF05127 Helicase N16961_VCA03731 PF08351 Domain of unknown function (DUF1726) N16961_VCA03731 PF13718 GNAT acetyltransferase 2 N16961_VCA03732 PF13416 Bacterial extracellular solute-binding protein