IR04_00050	PWY-5941	glycogen degradation II (eukaryotic)
IR04_00050	PWY-6731	starch degradation III
IR04_00050	PWY-6737	starch degradation V
IR04_00050	PWY-7238	sucrose biosynthesis II
IR04_00055	PWY-5941	glycogen degradation II (eukaryotic)
IR04_00055	PWY-6724	starch degradation II
IR04_00055	PWY-6737	starch degradation V
IR04_00055	PWY-7238	sucrose biosynthesis II
IR04_00060	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
IR04_00060	PWY-622	starch biosynthesis
IR04_00060	PWY-7900	IR04_00060
IR04_00115	PWY-6855	chitin degradation I (archaea)
IR04_00115	PWY-6902	chitin degradation II
IR04_00115	PWY-7822	IR04_00115
IR04_00230	PWY-4202	arsenate detoxification I (glutaredoxin)
IR04_00230	PWY-5532	adenosine nucleotides degradation IV
IR04_00230	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
IR04_00230	PWY-6608	guanosine nucleotides degradation III
IR04_00230	PWY-6609	adenine and adenosine salvage III
IR04_00230	PWY-6611	adenine and adenosine salvage V
IR04_00230	PWY-6620	guanine and guanosine salvage
IR04_00230	PWY-6627	salinosporamide A biosynthesis
IR04_00230	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
IR04_00230	PWY-7179	purine deoxyribonucleosides degradation I
IR04_00230	PWY-7179-1	purine deoxyribonucleosides degradation
IR04_00425	PWY-5381	pyridine nucleotide cycling (plants)
IR04_00855	PWY-6938	NADH repair
IR04_01040	PWY-5482	pyruvate fermentation to acetate II
IR04_01040	PWY-5485	pyruvate fermentation to acetate IV
IR04_01040	PWY-5497	purine nucleobases degradation II (anaerobic)
IR04_01075	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
IR04_01080	PWY-5686	UMP biosynthesis
IR04_01080	PWY-7790	IR04_01080
IR04_01080	PWY-7791	IR04_01080
IR04_01210	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_01210	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_01225	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
IR04_01225	PWY-5743	3-hydroxypropanoate cycle
IR04_01225	PWY-5744	glyoxylate assimilation
IR04_01225	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
IR04_01225	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_01225	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
IR04_01225	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
IR04_01245	PWY-1622	formaldehyde assimilation I (serine pathway)
IR04_01245	PWY-181	photorespiration
IR04_01245	PWY-2161	folate polyglutamylation
IR04_01245	PWY-2201	folate transformations I
IR04_01245	PWY-3661	glycine betaine degradation I
IR04_01245	PWY-3661-1	glycine betaine degradation II (mammalian)
IR04_01245	PWY-3841	folate transformations II
IR04_01245	PWY-5497	purine nucleobases degradation II (anaerobic)
IR04_02115	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_02115	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_02115	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_02125	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_02125	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
IR04_02125	PWY-6638	sulfolactate degradation III
IR04_02125	PWY-6642	(<i>R</i>)-cysteate degradation
IR04_02125	PWY-6643	coenzyme M biosynthesis II
IR04_02125	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
IR04_02125	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
IR04_02125	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_02420	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
IR04_02420	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
IR04_02420	PWY-7953	IR04_02420
IR04_02430	PWY-5392	reductive TCA cycle II
IR04_02430	PWY-5537	pyruvate fermentation to acetate V
IR04_02430	PWY-5538	pyruvate fermentation to acetate VI
IR04_02430	PWY-5690	TCA cycle II (plants and fungi)
IR04_02430	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_02430	PWY-6728	methylaspartate cycle
IR04_02430	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_02430	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
IR04_02565	PWY-6832	2-aminoethylphosphonate degradation II
IR04_02605	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
IR04_02605	PWY-2161	folate polyglutamylation
IR04_02605	PWY-2201	folate transformations I
IR04_02605	PWY-3841	folate transformations II
IR04_02615	PWY-5663	tetrahydrobiopterin biosynthesis I
IR04_02615	PWY-5664	tetrahydrobiopterin biosynthesis II
IR04_02615	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
IR04_02615	PWY-6703	preQ<sub>0</sub> biosynthesis
IR04_02615	PWY-6983	tetrahydrobiopterin biosynthesis III
IR04_02615	PWY-7442	drosopterin and aurodrosopterin biosynthesis
IR04_02615	PWY-7852	IR04_02615
IR04_02620	PWY-6823	molybdenum cofactor biosynthesis
IR04_02625	PWY-6823	molybdenum cofactor biosynthesis
IR04_02650	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
IR04_02650	PWY-5723	Rubisco shunt
IR04_02655	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
IR04_02655	PWY-5723	Rubisco shunt
IR04_02655	PWY-6891	thiazole biosynthesis II (Bacillus)
IR04_02655	PWY-6892	thiazole biosynthesis I (E. coli)
IR04_02655	PWY-6901	superpathway of glucose and xylose degradation
IR04_02655	PWY-7560	methylerythritol phosphate pathway II
IR04_02815	PWY-4261	glycerol degradation I
IR04_02815	PWY-6118	glycerol-3-phosphate shuttle
IR04_02815	PWY-6952	glycerophosphodiester degradation
IR04_02895	PWY-5674	nitrate reduction IV (dissimilatory)
IR04_02965	PWY-5676	acetyl-CoA fermentation to butanoate II
IR04_02965	PWY-5741	ethylmalonyl-CoA pathway
IR04_02965	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
IR04_02965	PWY-7948	IR04_02965
IR04_02995	PWY-622	starch biosynthesis
IR04_02995	PWY-7902	IR04_02995
IR04_03000	PWY-6855	chitin degradation I (archaea)
IR04_03000	PWY-6902	chitin degradation II
IR04_03000	PWY-7822	IR04_03000
IR04_03035	PWY-1042	glycolysis IV (plant cytosol)
IR04_03035	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
IR04_03035	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_03035	PWY-5723	Rubisco shunt
IR04_03035	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_03035	PWY-6886	1-butanol autotrophic biosynthesis
IR04_03035	PWY-6901	superpathway of glucose and xylose degradation
IR04_03035	PWY-7003	glycerol degradation to butanol
IR04_03035	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
IR04_03035	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_03060	PWY-7039	phosphatidate metabolism, as a signaling molecule
IR04_03060	PWY-7817	IR04_03060
IR04_03105	PWY-6174	mevalonate pathway II (archaea)
IR04_03105	PWY-7391	isoprene biosynthesis II (engineered)
IR04_03105	PWY-7524	mevalonate pathway III (archaea)
IR04_03105	PWY-922	mevalonate pathway I
IR04_03215	PWY-4261	glycerol degradation I
IR04_03230	PWY-4261	glycerol degradation I
IR04_03230	PWY-6118	glycerol-3-phosphate shuttle
IR04_03230	PWY-6952	glycerophosphodiester degradation
IR04_03235	PWY-4261	glycerol degradation I
IR04_03235	PWY-6118	glycerol-3-phosphate shuttle
IR04_03235	PWY-6952	glycerophosphodiester degradation
IR04_03245	PWY-4381	fatty acid biosynthesis initiation I
IR04_03345	PWY-6012	acyl carrier protein metabolism I
IR04_03365	PWY-3821	galactose degradation III
IR04_03365	PWY-6317	galactose degradation I (Leloir pathway)
IR04_03365	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
IR04_03365	PWY-6527	stachyose degradation
IR04_03365	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
IR04_03365	PWY-7344	UDP-D-galactose biosynthesis
IR04_03370	PWY-4041	&gamma;-glutamyl cycle
IR04_03370	PWY-7942	IR04_03370
IR04_03390	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
IR04_03390	PWY-7820	IR04_03390
IR04_03410	PWY-5971	palmitate biosynthesis II (bacteria and plants)
IR04_03410	PWY-5973	<i>cis</i>-vaccenate biosynthesis
IR04_03410	PWY-5989	stearate biosynthesis II (bacteria and plants)
IR04_03410	PWY-6113	superpathway of mycolate biosynthesis
IR04_03410	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
IR04_03410	PWY-6519	8-amino-7-oxononanoate biosynthesis I
IR04_03410	PWY-7663	gondoate biosynthesis (anaerobic)
IR04_03410	PWY-7664	oleate biosynthesis IV (anaerobic)
IR04_03410	PWY-7858	IR04_03410
IR04_03410	PWYG-321	mycolate biosynthesis
IR04_03550	PWY-40	putrescine biosynthesis I
IR04_03550	PWY-6305	putrescine biosynthesis IV
IR04_03555	PWY-40	putrescine biosynthesis I
IR04_03555	PWY-43	putrescine biosynthesis II
IR04_03555	PWY-6305	putrescine biosynthesis IV
IR04_03555	PWY-6834	spermidine biosynthesis III
IR04_03595	PWY-6409	pyoverdine I biosynthesis
IR04_03595	PWY-6562	norspermidine biosynthesis
IR04_03595	PWY-761	rhizobactin 1021 biosynthesis
IR04_03595	PWY-7855	IR04_03595
IR04_03595	PWY-7988	IR04_03595
IR04_03605	PWY-7158	L-phenylalanine degradation V
IR04_03610	PWY-6134	L-tyrosine biosynthesis IV
IR04_03610	PWY-7158	L-phenylalanine degradation V
IR04_03665	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
IR04_03670	PWY-1042	glycolysis IV (plant cytosol)
IR04_03670	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_03670	PWY-6901	superpathway of glucose and xylose degradation
IR04_03670	PWY-7003	glycerol degradation to butanol
IR04_03860	PWY-7378	aminopropanol phosphate biosynthesis II
IR04_03920	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
IR04_03925	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
IR04_03925	PWY-6855	chitin degradation I (archaea)
IR04_03925	PWY-6906	chitin derivatives degradation
IR04_03975	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
IR04_03975	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
IR04_04050	PWY-5963	thio-molybdenum cofactor biosynthesis
IR04_04055	PWY-5686	UMP biosynthesis
IR04_04055	PWY-7790	IR04_04055
IR04_04055	PWY-7791	IR04_04055
IR04_04200	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_04200	PWY-7118	chitin degradation to ethanol
IR04_04200	PWY-7294	xylose degradation IV
IR04_04200	PWY-7295	L-arabinose degradation IV
IR04_04200	PWY-7854	IR04_04200
IR04_04255	PWY-5532	adenosine nucleotides degradation IV
IR04_04255	PWY-7181	pyrimidine deoxyribonucleosides degradation
IR04_04345	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_04345	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_04510	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
IR04_04510	PWY-6855	chitin degradation I (archaea)
IR04_04510	PWY-6906	chitin derivatives degradation
IR04_04565	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
IR04_04565	PWY-6164	3-dehydroquinate biosynthesis I
IR04_04565	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
IR04_04590	PWY-6749	CMP-legionaminate biosynthesis I
IR04_04615	PWY-6531	mannitol cycle
IR04_04685	PWY-6167	flavin biosynthesis II (archaea)
IR04_04685	PWY-6168	flavin biosynthesis III (fungi)
IR04_04700	PWY-46	putrescine biosynthesis III
IR04_04700	PWY-6305	putrescine biosynthesis IV
IR04_04735	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
IR04_04735	PWY-6853	ethylene biosynthesis II (microbes)
IR04_04735	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
IR04_05055	PWY-5101	L-isoleucine biosynthesis II
IR04_05055	PWY-5103	L-isoleucine biosynthesis III
IR04_05055	PWY-5104	L-isoleucine biosynthesis IV
IR04_05055	PWY-7111	pyruvate fermentation to isobutanol (engineered)
IR04_05060	PWY-5057	L-valine degradation II
IR04_05060	PWY-5076	L-leucine degradation III
IR04_05060	PWY-5078	L-isoleucine degradation II
IR04_05060	PWY-5101	L-isoleucine biosynthesis II
IR04_05060	PWY-5103	L-isoleucine biosynthesis III
IR04_05060	PWY-5104	L-isoleucine biosynthesis IV
IR04_05060	PWY-5108	L-isoleucine biosynthesis V
IR04_05060	PWY-7767	IR04_05060
IR04_05070	PWY-5101	L-isoleucine biosynthesis II
IR04_05070	PWY-5103	L-isoleucine biosynthesis III
IR04_05070	PWY-5104	L-isoleucine biosynthesis IV
IR04_05070	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
IR04_05070	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
IR04_05070	PWY-6389	(<i>S</i>)-acetoin biosynthesis
IR04_05070	PWY-7111	pyruvate fermentation to isobutanol (engineered)
IR04_05175	PWY-6123	inosine-5'-phosphate biosynthesis I
IR04_05175	PWY-7234	inosine-5'-phosphate biosynthesis III
IR04_05185	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
IR04_05190	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
IR04_05245	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
IR04_05250	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
IR04_05250	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
IR04_05250	PWY-6897	thiamin salvage II
IR04_05250	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
IR04_05250	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
IR04_05250	PWY-7356	thiamin salvage IV (yeast)
IR04_05250	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
IR04_05255	PWY-6891	thiazole biosynthesis II (Bacillus)
IR04_05255	PWY-6892	thiazole biosynthesis I (E. coli)
IR04_05265	PWY-6891	thiazole biosynthesis II (Bacillus)
IR04_05265	PWY-6892	thiazole biosynthesis I (E. coli)
IR04_05270	PWY-6892	thiazole biosynthesis I (E. coli)
IR04_05270	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
IR04_05350	PWY-5839	menaquinol-7 biosynthesis
IR04_05350	PWY-5844	menaquinol-9 biosynthesis
IR04_05350	PWY-5849	menaquinol-6 biosynthesis
IR04_05350	PWY-5890	menaquinol-10 biosynthesis
IR04_05350	PWY-5891	menaquinol-11 biosynthesis
IR04_05350	PWY-5892	menaquinol-12 biosynthesis
IR04_05350	PWY-5895	menaquinol-13 biosynthesis
IR04_05400	PWY-5667	CDP-diacylglycerol biosynthesis I
IR04_05400	PWY-6453	stigma estolide biosynthesis
IR04_05400	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
IR04_05400	PWY-7587	oleate biosynthesis III (cyanobacteria)
IR04_05410	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
IR04_05410	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
IR04_05410	PWY-6148	tetrahydromethanopterin biosynthesis
IR04_05410	PWY-7742	IR04_05410
IR04_05410	PWY-7745	IR04_05410
IR04_05410	PWY-7929	IR04_05410
IR04_05410	PWY-7934	IR04_05410
IR04_05410	PWY-7935	IR04_05410
IR04_05435	PWY-5350	thiosulfate disproportionation III (rhodanese)
IR04_05435	PWY-7927	IR04_05435
IR04_05445	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
IR04_05445	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
IR04_05485	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
IR04_05500	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
IR04_05500	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
IR04_05505	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
IR04_05505	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
IR04_05530	PWY-2941	L-lysine biosynthesis II
IR04_05530	PWY-2942	L-lysine biosynthesis III
IR04_05530	PWY-5097	L-lysine biosynthesis VI
IR04_05535	PWY-2941	L-lysine biosynthesis II
IR04_05535	PWY-5097	L-lysine biosynthesis VI
IR04_05650	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
IR04_05680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
IR04_05680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
IR04_05720	PWY-5103	L-isoleucine biosynthesis III
IR04_05720	PWY-7111	pyruvate fermentation to isobutanol (engineered)
IR04_05905	PWY-4041	&gamma;-glutamyl cycle
IR04_05905	PWY-4061	glutathione-mediated detoxification I
IR04_05905	PWY-5826	hypoglycin biosynthesis
IR04_05905	PWY-6842	glutathione-mediated detoxification II
IR04_05905	PWY-7112	4-hydroxy-2-nonenal detoxification
IR04_05905	PWY-7559	glutathione degradation (DUG pathway - yeast)
IR04_05985	PWY-5686	UMP biosynthesis
IR04_05985	PWY-7790	IR04_05985
IR04_05985	PWY-7791	IR04_05985
IR04_06005	PWY-7851	IR04_06005
IR04_06040	PWY-7851	IR04_06040
IR04_06060	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
IR04_06060	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
IR04_06090	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
IR04_06130	PWY-5659	GDP-mannose biosynthesis
IR04_06130	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
IR04_06135	PWY-6749	CMP-legionaminate biosynthesis I
IR04_06140	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
IR04_06140	PWY-5739	GDP-D-perosamine biosynthesis
IR04_06140	PWY-5740	GDP-L-colitose biosynthesis
IR04_06140	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
IR04_06140	PWY-7573	GDP-mycosamine biosynthesis
IR04_06180	PWY-7723	IR04_06180
IR04_06250	PWY-3861	mannitol degradation II
IR04_06250	PWY-3881	mannitol biosynthesis
IR04_06250	PWY-5659	GDP-mannose biosynthesis
IR04_06250	PWY-6992	1,5-anhydrofructose degradation
IR04_06250	PWY-7456	mannan degradation
IR04_06250	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
IR04_06250	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
IR04_06275	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
IR04_06275	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
IR04_06275	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
IR04_06280	PWY-6123	inosine-5'-phosphate biosynthesis I
IR04_06280	PWY-6124	inosine-5'-phosphate biosynthesis II
IR04_06280	PWY-7234	inosine-5'-phosphate biosynthesis III
IR04_06330	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
IR04_06330	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
IR04_06330	PWY-7242	D-fructuronate degradation
IR04_06330	PWY-7310	D-glucosaminate degradation
IR04_06330	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
IR04_06340	PWY-5530	sorbitol biosynthesis II
IR04_06340	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
IR04_06345	PWY-5101	L-isoleucine biosynthesis II
IR04_06345	PWY-5103	L-isoleucine biosynthesis III
IR04_06345	PWY-5104	L-isoleucine biosynthesis IV
IR04_06345	PWY-7111	pyruvate fermentation to isobutanol (engineered)
IR04_06380	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
IR04_06380	PWY-6416	quinate degradation II
IR04_06380	PWY-6707	gallate biosynthesis
IR04_06385	PWY-5108	L-isoleucine biosynthesis V
IR04_06385	PWY-5132	humulone biosynthesis
IR04_06385	PWY-5133	cohumulone biosynthesis
IR04_06385	PWY-6672	<i>cis</i>-genanyl-CoA degradation
IR04_06385	PWY-7118	chitin degradation to ethanol
IR04_06385	PWY-7857	IR04_06385
IR04_06425	PWY-7980	IR04_06425
IR04_06435	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
IR04_06435	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
IR04_06435	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
IR04_06435	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
IR04_06435	PWY-6978	plastoquinol-9 biosynthesis II
IR04_06490	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
IR04_06490	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
IR04_06490	PWY-7953	IR04_06490
IR04_06495	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
IR04_06495	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
IR04_06500	PWY-3961	phosphopantothenate biosynthesis II
IR04_06575	PWY-5381	pyridine nucleotide cycling (plants)
IR04_06575	PWY-7761	IR04_06575
IR04_06580	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
IR04_06580	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
IR04_06580	PWY-7766	IR04_06580
IR04_06600	PWY-1042	glycolysis IV (plant cytosol)
IR04_06600	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
IR04_06600	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_06600	PWY-5723	Rubisco shunt
IR04_06600	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_06600	PWY-6886	1-butanol autotrophic biosynthesis
IR04_06600	PWY-6901	superpathway of glucose and xylose degradation
IR04_06600	PWY-7003	glycerol degradation to butanol
IR04_06600	PWY-7124	ethylene biosynthesis V (engineered)
IR04_06600	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
IR04_06615	PWY-5669	phosphatidylethanolamine biosynthesis I
IR04_06675	PWY-6700	queuosine biosynthesis
IR04_06695	PWY-2781	<i>cis</i>-zeatin biosynthesis
IR04_06820	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_06830	PWY-3801	sucrose degradation II (sucrose synthase)
IR04_06830	PWY-5054	sorbitol biosynthesis I
IR04_06830	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
IR04_06830	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
IR04_06830	PWY-5659	GDP-mannose biosynthesis
IR04_06830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_06830	PWY-621	sucrose degradation III (sucrose invertase)
IR04_06830	PWY-622	starch biosynthesis
IR04_06830	PWY-6981	chitin biosynthesis
IR04_06830	PWY-6992	1,5-anhydrofructose degradation
IR04_06830	PWY-7238	sucrose biosynthesis II
IR04_06830	PWY-7347	sucrose biosynthesis III
IR04_06830	PWY-7385	1,3-propanediol biosynthesis (engineered)
IR04_06870	PWY-6683	sulfate reduction III (assimilatory)
IR04_06875	PWY-6683	sulfate reduction III (assimilatory)
IR04_06920	PWY-2201	folate transformations I
IR04_06920	PWY-3841	folate transformations II
IR04_06920	PWY-7977	IR04_06920
IR04_06925	PWY-2941	L-lysine biosynthesis II
IR04_06925	PWY-2942	L-lysine biosynthesis III
IR04_06925	PWY-5097	L-lysine biosynthesis VI
IR04_06925	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
IR04_06925	PWY-6559	spermidine biosynthesis II
IR04_06925	PWY-6562	norspermidine biosynthesis
IR04_06925	PWY-7153	grixazone biosynthesis
IR04_06925	PWY-7977	IR04_06925
IR04_06930	PWY-6832	2-aminoethylphosphonate degradation II
IR04_07085	PWY-4981	L-proline biosynthesis II (from arginine)
IR04_07130	PWY-1622	formaldehyde assimilation I (serine pathway)
IR04_07130	PWY-5392	reductive TCA cycle II
IR04_07130	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
IR04_07130	PWY-5690	TCA cycle II (plants and fungi)
IR04_07130	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_07130	PWY-6728	methylaspartate cycle
IR04_07130	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_07130	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
IR04_07130	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_07175	PWY-3841	folate transformations II
IR04_07175	PWY-6614	tetrahydrofolate biosynthesis
IR04_07315	PWY-3341	L-proline biosynthesis III
IR04_07315	PWY-4981	L-proline biosynthesis II (from arginine)
IR04_07315	PWY-6344	L-ornithine degradation II (Stickland reaction)
IR04_07320	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_07375	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
IR04_07375	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
IR04_07385	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
IR04_07385	PWY-5723	Rubisco shunt
IR04_07385	PWY-6891	thiazole biosynthesis II (Bacillus)
IR04_07385	PWY-6892	thiazole biosynthesis I (E. coli)
IR04_07385	PWY-6901	superpathway of glucose and xylose degradation
IR04_07385	PWY-7560	methylerythritol phosphate pathway II
IR04_07405	PWY-1042	glycolysis IV (plant cytosol)
IR04_07405	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_07405	PWY-6886	1-butanol autotrophic biosynthesis
IR04_07405	PWY-6901	superpathway of glucose and xylose degradation
IR04_07405	PWY-7003	glycerol degradation to butanol
IR04_07415	PWY-1042	glycolysis IV (plant cytosol)
IR04_07415	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
IR04_07415	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_07415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_07415	PWY-7385	1,3-propanediol biosynthesis (engineered)
IR04_07445	PWY-1042	glycolysis IV (plant cytosol)
IR04_07445	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
IR04_07445	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_07445	PWY-5723	Rubisco shunt
IR04_07445	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_07445	PWY-6886	1-butanol autotrophic biosynthesis
IR04_07445	PWY-6901	superpathway of glucose and xylose degradation
IR04_07445	PWY-7003	glycerol degradation to butanol
IR04_07445	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
IR04_07445	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_07455	PWY-6749	CMP-legionaminate biosynthesis I
IR04_07570	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
IR04_07570	PWY-6148	tetrahydromethanopterin biosynthesis
IR04_07570	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
IR04_07570	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
IR04_07575	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
IR04_07575	PWY-6148	tetrahydromethanopterin biosynthesis
IR04_07575	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
IR04_07575	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
IR04_07575	PWY-7852	IR04_07575
IR04_07575	PWY-7853	IR04_07575
IR04_07580	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
IR04_07590	PWY-7560	methylerythritol phosphate pathway II
IR04_07595	PWY-7560	methylerythritol phosphate pathway II
IR04_07605	PWY-5381	pyridine nucleotide cycling (plants)
IR04_07605	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
IR04_07605	PWY-6596	adenosine nucleotides degradation I
IR04_07605	PWY-6606	guanosine nucleotides degradation II
IR04_07605	PWY-6607	guanosine nucleotides degradation I
IR04_07605	PWY-6608	guanosine nucleotides degradation III
IR04_07605	PWY-7185	UTP and CTP dephosphorylation I
IR04_07605	PWY-7821	IR04_07605
IR04_07630	PWY-6936	seleno-amino acid biosynthesis
IR04_07675	PWY-2941	L-lysine biosynthesis II
IR04_07675	PWY-2942	L-lysine biosynthesis III
IR04_07675	PWY-5097	L-lysine biosynthesis VI
IR04_07675	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
IR04_07675	PWY-6559	spermidine biosynthesis II
IR04_07675	PWY-6562	norspermidine biosynthesis
IR04_07675	PWY-7153	grixazone biosynthesis
IR04_07675	PWY-7977	IR04_07675
IR04_07760	PWY-6840	homoglutathione biosynthesis
IR04_07760	PWY-7255	ergothioneine biosynthesis I (bacteria)
IR04_07765	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
IR04_07765	PWY-6153	autoinducer AI-2 biosynthesis I
IR04_07765	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
IR04_07795	PWY-6829	tRNA methylation (yeast)
IR04_07795	PWY-7285	methylwyosine biosynthesis
IR04_07795	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
IR04_07835	PWY-3781	aerobic respiration I (cytochrome c)
IR04_07835	PWY-6692	Fe(II) oxidation
IR04_07835	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
IR04_07835	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
IR04_07865	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
IR04_07890	PWY-6599	guanine and guanosine salvage II
IR04_07890	PWY-6609	adenine and adenosine salvage III
IR04_07890	PWY-6610	adenine and adenosine salvage IV
IR04_07890	PWY-6620	guanine and guanosine salvage
IR04_07895	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
IR04_07895	PWY-5743	3-hydroxypropanoate cycle
IR04_07895	PWY-5744	glyoxylate assimilation
IR04_07895	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
IR04_07895	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_07895	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
IR04_07895	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
IR04_07920	PWY-6654	phosphopantothenate biosynthesis III
IR04_07925	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
IR04_07925	PWY-6148	tetrahydromethanopterin biosynthesis
IR04_07925	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
IR04_07925	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
IR04_07925	PWY-7852	IR04_07925
IR04_07925	PWY-7853	IR04_07925
IR04_07960	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_07960	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
IR04_07960	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
IR04_07960	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_07970	PWY-5747	2-methylcitrate cycle II
IR04_08005	PWY-6749	CMP-legionaminate biosynthesis I
IR04_08015	PWY-6902	chitin degradation II
IR04_08015	PWY-7822	IR04_08015
IR04_08015	PWY-7883	IR04_08015
IR04_08025	PWY-6788	cellulose degradation II (fungi)
IR04_08070	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
IR04_08105	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_08105	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_08135	PWY-6614	tetrahydrofolate biosynthesis
IR04_08140	PWY-6749	CMP-legionaminate biosynthesis I
IR04_08335	PWY-6614	tetrahydrofolate biosynthesis
IR04_08655	PWY-3841	folate transformations II
IR04_08655	PWY-6614	tetrahydrofolate biosynthesis
IR04_08795	PWY-3841	folate transformations II
IR04_08795	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
IR04_08795	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_08795	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
IR04_08795	PWY-7199	pyrimidine deoxyribonucleosides salvage
IR04_08795	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
IR04_08825	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
IR04_08825	PWY-6167	flavin biosynthesis II (archaea)
IR04_08825	PWY-6168	flavin biosynthesis III (fungi)
IR04_08825	PWY-7863	IR04_08825
IR04_08835	PWY-7884	IR04_08835
IR04_08845	PWY-7560	methylerythritol phosphate pathway II
IR04_08870	PWY-7883	IR04_08870
IR04_08875	PWY-6902	chitin degradation II
IR04_08875	PWY-7822	IR04_08875
IR04_08875	PWY-7883	IR04_08875
IR04_08890	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
IR04_08890	PWY-6164	3-dehydroquinate biosynthesis I
IR04_08890	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
IR04_08895	PWY-3461	L-tyrosine biosynthesis II
IR04_08895	PWY-3462	L-phenylalanine biosynthesis II
IR04_08895	PWY-6120	L-tyrosine biosynthesis III
IR04_08895	PWY-6627	salinosporamide A biosynthesis
IR04_08895	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
IR04_08895	PWY-7626	bacilysin biosynthesis
IR04_08935	PWY-3461	L-tyrosine biosynthesis II
IR04_08935	PWY-3462	L-phenylalanine biosynthesis II
IR04_08935	PWY-6120	L-tyrosine biosynthesis III
IR04_08935	PWY-6627	salinosporamide A biosynthesis
IR04_08935	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
IR04_08935	PWY-7626	bacilysin biosynthesis
IR04_09080	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_09080	PWY-7118	chitin degradation to ethanol
IR04_09080	PWY-7294	xylose degradation IV
IR04_09080	PWY-7295	L-arabinose degradation IV
IR04_09080	PWY-7854	IR04_09080
IR04_09085	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_09095	PWY-6700	queuosine biosynthesis
IR04_09100	PWY-6700	queuosine biosynthesis
IR04_09120	PWY-2301	<i>myo</i>-inositol biosynthesis
IR04_09120	PWY-4702	phytate degradation I
IR04_09120	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
IR04_09135	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
IR04_09175	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
IR04_09175	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
IR04_09175	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
IR04_09175	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_09175	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
IR04_09175	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
IR04_09175	PWY-7205	CMP phosphorylation
IR04_09175	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
IR04_09175	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_09175	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
IR04_09175	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_09175	PWY-7224	purine deoxyribonucleosides salvage
IR04_09175	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
IR04_09175	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
IR04_09230	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
IR04_09230	PWY-6596	adenosine nucleotides degradation I
IR04_09230	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
IR04_09235	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
IR04_09245	PWY-6855	chitin degradation I (archaea)
IR04_09245	PWY-6902	chitin degradation II
IR04_09245	PWY-7822	IR04_09245
IR04_09265	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
IR04_09265	PWY-5901	2,3-dihydroxybenzoate biosynthesis
IR04_09265	PWY-6406	salicylate biosynthesis I
IR04_09270	PWY-5901	2,3-dihydroxybenzoate biosynthesis
IR04_09300	PWY-6012	acyl carrier protein metabolism I
IR04_09300	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
IR04_09300	PWY-6289	petrobactin biosynthesis
IR04_09380	PWY-5392	reductive TCA cycle II
IR04_09380	PWY-6038	citrate degradation
IR04_09385	PWY-6038	citrate degradation
IR04_09395	PWY-5796	malonate decarboxylase activation
IR04_09645	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
IR04_09645	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
IR04_09645	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
IR04_09800	PWY-6891	thiazole biosynthesis II (Bacillus)
IR04_09800	PWY-6892	thiazole biosynthesis I (E. coli)
IR04_09800	PWY-7560	methylerythritol phosphate pathway II
IR04_09850	PWY-6617	adenosine nucleotides degradation III
IR04_09850	PWY-7569	arginomycin biosynthesis
IR04_09850	PWY-7570	blasticidin S biosynthesis
IR04_09865	PWY-6700	queuosine biosynthesis
IR04_09975	PWY-6936	seleno-amino acid biosynthesis
IR04_09975	PWY-7274	D-cycloserine biosynthesis
IR04_09975	PWY-7870	IR04_09975
IR04_10025	PWY-6655	xanthan biosynthesis
IR04_10025	PWY-6658	acetan biosynthesis
IR04_10060	PWY-1622	formaldehyde assimilation I (serine pathway)
IR04_10060	PWY-181	photorespiration
IR04_10060	PWY-2161	folate polyglutamylation
IR04_10060	PWY-2201	folate transformations I
IR04_10060	PWY-3661	glycine betaine degradation I
IR04_10060	PWY-3661-1	glycine betaine degradation II (mammalian)
IR04_10060	PWY-3841	folate transformations II
IR04_10060	PWY-5497	purine nucleobases degradation II (anaerobic)
IR04_10070	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
IR04_10070	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
IR04_10075	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
IR04_10075	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
IR04_10085	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_10085	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_10095	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_10095	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
IR04_10095	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
IR04_10095	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_10100	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_10100	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_10180	PWY-6936	seleno-amino acid biosynthesis
IR04_10270	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
IR04_10305	PWY-6906	chitin derivatives degradation
IR04_10305	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
IR04_10305	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
IR04_10330	PWY-4381	fatty acid biosynthesis initiation I
IR04_10330	PWY-5743	3-hydroxypropanoate cycle
IR04_10330	PWY-5744	glyoxylate assimilation
IR04_10330	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
IR04_10330	PWY-6722	candicidin biosynthesis
IR04_10335	PWY-2161	folate polyglutamylation
IR04_10350	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
IR04_10350	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
IR04_10350	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
IR04_10350	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
IR04_10380	PWY-5386	methylglyoxal degradation I
IR04_10455	PWY-6823	molybdenum cofactor biosynthesis
IR04_10465	PWY-6823	molybdenum cofactor biosynthesis
IR04_10475	PWY-6823	molybdenum cofactor biosynthesis
IR04_10475	PWY-7887	IR04_10475
IR04_10495	PWY-4202	arsenate detoxification I (glutaredoxin)
IR04_10495	PWY-5532	adenosine nucleotides degradation IV
IR04_10495	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
IR04_10495	PWY-6608	guanosine nucleotides degradation III
IR04_10495	PWY-6609	adenine and adenosine salvage III
IR04_10495	PWY-6611	adenine and adenosine salvage V
IR04_10495	PWY-6620	guanine and guanosine salvage
IR04_10495	PWY-6627	salinosporamide A biosynthesis
IR04_10495	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
IR04_10495	PWY-7179	purine deoxyribonucleosides degradation I
IR04_10495	PWY-7179-1	purine deoxyribonucleosides degradation
IR04_10520	PWY-7193	pyrimidine ribonucleosides salvage I
IR04_10570	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
IR04_10570	PWY-6435	4-hydroxybenzoate biosynthesis V
IR04_10570	PWY-6863	pyruvate fermentation to hexanol
IR04_10570	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
IR04_10570	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
IR04_10570	PWY-6948	sitosterol degradation to androstenedione
IR04_10570	PWY-7094	fatty acid salvage
IR04_10570	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
IR04_10570	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
IR04_10570	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
IR04_10570	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
IR04_10570	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
IR04_10570	PWY-735	jasmonic acid biosynthesis
IR04_10570	PWY-7606	docosahexaenoate biosynthesis III (mammals)
IR04_10570	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
IR04_10570	PWY-7726	IR04_10570
IR04_10575	PWY-1361	benzoyl-CoA degradation I (aerobic)
IR04_10575	PWY-5109	2-methylbutanoate biosynthesis
IR04_10575	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
IR04_10575	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
IR04_10575	PWY-5177	glutaryl-CoA degradation
IR04_10575	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
IR04_10575	PWY-6435	4-hydroxybenzoate biosynthesis V
IR04_10575	PWY-6583	pyruvate fermentation to butanol I
IR04_10575	PWY-6863	pyruvate fermentation to hexanol
IR04_10575	PWY-6883	pyruvate fermentation to butanol II
IR04_10575	PWY-6944	androstenedione degradation
IR04_10575	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
IR04_10575	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
IR04_10575	PWY-7007	methyl ketone biosynthesis
IR04_10575	PWY-7046	4-coumarate degradation (anaerobic)
IR04_10575	PWY-7094	fatty acid salvage
IR04_10575	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
IR04_10575	PWY-735	jasmonic acid biosynthesis
IR04_10575	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
IR04_10575	PWY-7606	docosahexaenoate biosynthesis III (mammals)
IR04_10575	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
IR04_10575	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
IR04_10575	PWY-7726	IR04_10575
IR04_10575	PWY-7778	IR04_10575
IR04_10575	PWY-7779	IR04_10575
IR04_10605	PWY-6605	adenine and adenosine salvage II
IR04_10605	PWY-6610	adenine and adenosine salvage IV
IR04_10605	PWY-7805	IR04_10605
IR04_10605	PWY-7807	IR04_10605
IR04_10685	PWY-1042	glycolysis IV (plant cytosol)
IR04_10685	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_10685	PWY-6901	superpathway of glucose and xylose degradation
IR04_10685	PWY-7003	glycerol degradation to butanol
IR04_10700	PWY-6788	cellulose degradation II (fungi)
IR04_10700	PWY-6855	chitin degradation I (archaea)
IR04_10700	PWY-6902	chitin degradation II
IR04_10700	PWY-7822	IR04_10700
IR04_10815	PWY-1281	sulfoacetaldehyde degradation I
IR04_10815	PWY-5482	pyruvate fermentation to acetate II
IR04_10815	PWY-5485	pyruvate fermentation to acetate IV
IR04_10815	PWY-5497	purine nucleobases degradation II (anaerobic)
IR04_10815	PWY-6637	sulfolactate degradation II
IR04_10820	PWY-5482	pyruvate fermentation to acetate II
IR04_10820	PWY-5485	pyruvate fermentation to acetate IV
IR04_10820	PWY-5497	purine nucleobases degradation II (anaerobic)
IR04_10875	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
IR04_10885	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
IR04_10890	PWY-6519	8-amino-7-oxononanoate biosynthesis I
IR04_10890	PWY-6578	8-amino-7-oxononanoate biosynthesis III
IR04_10890	PWY-7147	8-amino-7-oxononanoate biosynthesis II
IR04_10895	PWY-6519	8-amino-7-oxononanoate biosynthesis I
IR04_10900	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
IR04_10955	PWY-6123	inosine-5'-phosphate biosynthesis I
IR04_10955	PWY-6124	inosine-5'-phosphate biosynthesis II
IR04_10955	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
IR04_10955	PWY-7234	inosine-5'-phosphate biosynthesis III
IR04_10965	PWY-7887	IR04_10965
IR04_10965	PWY-7892	IR04_10965
IR04_11030	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_11030	PWY-6549	L-glutamine biosynthesis III
IR04_11030	PWY-6728	methylaspartate cycle
IR04_11030	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_11030	PWY-7124	ethylene biosynthesis V (engineered)
IR04_11030	PWY-7254	TCA cycle VII (acetate-producers)
IR04_11030	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
IR04_11070	PWY-5155	&beta;-alanine biosynthesis III
IR04_11120	PWY-6840	homoglutathione biosynthesis
IR04_11120	PWY-7255	ergothioneine biosynthesis I (bacteria)
IR04_11155	PWY-7199	pyrimidine deoxyribonucleosides salvage
IR04_11185	PWY-5958	acridone alkaloid biosynthesis
IR04_11185	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
IR04_11185	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
IR04_11190	PWY-5958	acridone alkaloid biosynthesis
IR04_11190	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
IR04_11190	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
IR04_11255	PWY-6339	syringate degradation
IR04_11265	PWY-6123	inosine-5'-phosphate biosynthesis I
IR04_11265	PWY-6124	inosine-5'-phosphate biosynthesis II
IR04_11265	PWY-7234	inosine-5'-phosphate biosynthesis III
IR04_11310	PWY-6825	phosphatidylcholine biosynthesis V
IR04_11325	PWY-5028	L-histidine degradation II
IR04_11325	PWY-5030	L-histidine degradation III
IR04_11330	PWY-5028	L-histidine degradation II
IR04_11330	PWY-5030	L-histidine degradation III
IR04_11340	PWY-5028	L-histidine degradation II
IR04_11340	PWY-5030	L-histidine degradation III
IR04_11390	PWY-5269	cardiolipin biosynthesis II
IR04_11390	PWY-5668	cardiolipin biosynthesis I
IR04_11390	PWY-7817	IR04_11390
IR04_11465	PWY-6556	pyrimidine ribonucleosides salvage II
IR04_11465	PWY-7181	pyrimidine deoxyribonucleosides degradation
IR04_11465	PWY-7193	pyrimidine ribonucleosides salvage I
IR04_11465	PWY-7199	pyrimidine deoxyribonucleosides salvage
IR04_11500	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
IR04_11500	PWY-6269	adenosylcobalamin salvage from cobinamide II
IR04_11500	PWY-7964	IR04_11500
IR04_11500	PWY-7965	IR04_11500
IR04_11500	PWY-7966	IR04_11500
IR04_11500	PWY-7967	IR04_11500
IR04_11500	PWY-7968	IR04_11500
IR04_11500	PWY-7969	IR04_11500
IR04_11500	PWY-7970	IR04_11500
IR04_11505	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
IR04_11505	PWY-6269	adenosylcobalamin salvage from cobinamide II
IR04_11505	PWY-7961	IR04_11505
IR04_11505	PWY-7963	IR04_11505
IR04_11505	PWY-7964	IR04_11505
IR04_11505	PWY-7965	IR04_11505
IR04_11505	PWY-7966	IR04_11505
IR04_11505	PWY-7967	IR04_11505
IR04_11505	PWY-7968	IR04_11505
IR04_11505	PWY-7969	IR04_11505
IR04_11505	PWY-7970	IR04_11505
IR04_11505	PWY-7975	IR04_11505
IR04_11510	PWY-6269	adenosylcobalamin salvage from cobinamide II
IR04_11510	PWY-7962	IR04_11510
IR04_11510	PWY-7971	IR04_11510
IR04_11510	PWY-7972	IR04_11510
IR04_11575	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
IR04_11575	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
IR04_11575	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
IR04_11575	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
IR04_11575	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_11575	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_11575	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
IR04_11575	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
IR04_11580	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
IR04_11580	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
IR04_11580	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
IR04_11580	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
IR04_11580	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_11580	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_11580	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
IR04_11580	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
IR04_11585	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
IR04_11585	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
IR04_11585	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
IR04_11585	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
IR04_11585	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
IR04_11585	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
IR04_11585	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
IR04_11585	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
IR04_11585	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
IR04_11585	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
IR04_11615	PWY-6168	flavin biosynthesis III (fungi)
IR04_11615	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
IR04_11615	PWY-7991	IR04_11615
IR04_11760	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_11760	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
IR04_11760	PWY-6638	sulfolactate degradation III
IR04_11760	PWY-6642	(<i>R</i>)-cysteate degradation
IR04_11760	PWY-6643	coenzyme M biosynthesis II
IR04_11760	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
IR04_11760	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
IR04_11760	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_11775	PWY-6910	hydroxymethylpyrimidine salvage
IR04_11775	PWY-7356	thiamin salvage IV (yeast)
IR04_11775	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
IR04_11810	PWY-5958	acridone alkaloid biosynthesis
IR04_11810	PWY-6543	4-aminobenzoate biosynthesis
IR04_11810	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
IR04_11810	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
IR04_11815	PWY-5392	reductive TCA cycle II
IR04_11815	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
IR04_11815	PWY-5690	TCA cycle II (plants and fungi)
IR04_11815	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_11815	PWY-6728	methylaspartate cycle
IR04_11815	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_11815	PWY-7254	TCA cycle VII (acetate-producers)
IR04_11815	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
IR04_11855	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_11900	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_11900	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
IR04_11900	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
IR04_11900	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_11960	PWY-5747	2-methylcitrate cycle II
IR04_11980	PWY-5108	L-isoleucine biosynthesis V
IR04_11980	PWY-5132	humulone biosynthesis
IR04_11980	PWY-5133	cohumulone biosynthesis
IR04_11980	PWY-6672	<i>cis</i>-genanyl-CoA degradation
IR04_11980	PWY-7118	chitin degradation to ethanol
IR04_11980	PWY-7857	IR04_11980
IR04_12085	PWY-5194	siroheme biosynthesis
IR04_12085	PWY-5196	factor 430 biosynthesis
IR04_12085	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
IR04_12095	PWY-6703	preQ<sub>0</sub> biosynthesis
IR04_12100	PWY-6703	preQ<sub>0</sub> biosynthesis
IR04_12450	PWY-3781	aerobic respiration I (cytochrome c)
IR04_12450	PWY-4521	arsenite oxidation I (respiratory)
IR04_12450	PWY-6692	Fe(II) oxidation
IR04_12450	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
IR04_12660	PWY-5971	palmitate biosynthesis II (bacteria and plants)
IR04_12660	PWY-5973	<i>cis</i>-vaccenate biosynthesis
IR04_12660	PWY-5989	stearate biosynthesis II (bacteria and plants)
IR04_12660	PWY-5994	palmitate biosynthesis I (animals and fungi)
IR04_12660	PWY-6113	superpathway of mycolate biosynthesis
IR04_12660	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
IR04_12660	PWY-6519	8-amino-7-oxononanoate biosynthesis I
IR04_12660	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
IR04_12660	PWY-7663	gondoate biosynthesis (anaerobic)
IR04_12660	PWY-7664	oleate biosynthesis IV (anaerobic)
IR04_12660	PWY-7858	IR04_12660
IR04_12660	PWYG-321	mycolate biosynthesis
IR04_12690	PWY-5686	UMP biosynthesis
IR04_12695	PWY-5022	4-aminobutanoate degradation V
IR04_12695	PWY-6728	methylaspartate cycle
IR04_12695	PWY-7126	ethylene biosynthesis IV
IR04_12765	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
IR04_12765	PWY-6164	3-dehydroquinate biosynthesis I
IR04_12765	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
IR04_12860	PWY-5964	guanylyl molybdenum cofactor biosynthesis
IR04_12860	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
IR04_12865	PWY-6823	molybdenum cofactor biosynthesis
IR04_12890	PWY-6517	<i>N</i>-acetylglucosamine degradation II
IR04_12890	PWY-6906	chitin derivatives degradation
IR04_13080	PWY-5392	reductive TCA cycle II
IR04_13080	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
IR04_13080	PWY-5690	TCA cycle II (plants and fungi)
IR04_13080	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_13080	PWY-6728	methylaspartate cycle
IR04_13080	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_13080	PWY-7254	TCA cycle VII (acetate-producers)
IR04_13080	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
IR04_13130	PWY-6854	ethylene biosynthesis III (microbes)
IR04_13160	PWY-5101	L-isoleucine biosynthesis II
IR04_13160	PWY-5103	L-isoleucine biosynthesis III
IR04_13160	PWY-5104	L-isoleucine biosynthesis IV
IR04_13160	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
IR04_13160	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
IR04_13160	PWY-6389	(<i>S</i>)-acetoin biosynthesis
IR04_13160	PWY-7111	pyruvate fermentation to isobutanol (engineered)
IR04_13180	PWY-6317	galactose degradation I (Leloir pathway)
IR04_13185	PWY-3821	galactose degradation III
IR04_13185	PWY-6317	galactose degradation I (Leloir pathway)
IR04_13185	PWY-6527	stachyose degradation
IR04_13190	PWY-6317	galactose degradation I (Leloir pathway)
IR04_13190	PWY-6527	stachyose degradation
IR04_13340	PWY-6562	norspermidine biosynthesis
IR04_13350	PWY-6409	pyoverdine I biosynthesis
IR04_13350	PWY-6562	norspermidine biosynthesis
IR04_13350	PWY-761	rhizobactin 1021 biosynthesis
IR04_13350	PWY-7855	IR04_13350
IR04_13350	PWY-7988	IR04_13350
IR04_13655	PWY-7805	IR04_13655
IR04_13655	PWY-7807	IR04_13655
IR04_13670	PWY-6527	stachyose degradation
IR04_13740	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
IR04_13740	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
IR04_13740	PWY-6936	seleno-amino acid biosynthesis
IR04_13740	PWY-702	L-methionine biosynthesis II
IR04_13845	PWY-622	starch biosynthesis
IR04_13850	PWY-622	starch biosynthesis
IR04_13850	PWY-7902	IR04_13850
IR04_13870	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
IR04_13880	PWY-7801	IR04_13880
IR04_13885	PWY-7802	IR04_13885
IR04_13900	PWY-7094	fatty acid salvage
IR04_13900	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
IR04_14090	PWY-6138	CMP-<i>N</i>-acetylneuraminate biosynthesis I (eukaryotes)
IR04_14095	PWY-6906	chitin derivatives degradation
IR04_14095	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
IR04_14095	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
IR04_14310	PWY-3861	mannitol degradation II
IR04_14310	PWY-3881	mannitol biosynthesis
IR04_14310	PWY-5659	GDP-mannose biosynthesis
IR04_14310	PWY-6992	1,5-anhydrofructose degradation
IR04_14310	PWY-7456	mannan degradation
IR04_14310	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
IR04_14310	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
IR04_14330	PWY-5316	nicotine biosynthesis
IR04_14330	PWY-7342	superpathway of nicotine biosynthesis
IR04_14375	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
IR04_14495	PWY-5480	pyruvate fermentation to ethanol I
IR04_14495	PWY-5485	pyruvate fermentation to acetate IV
IR04_14495	PWY-5493	reductive monocarboxylic acid cycle
IR04_14540	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
IR04_14715	PWY-5686	UMP biosynthesis
IR04_14715	PWY-7790	IR04_14715
IR04_14715	PWY-7791	IR04_14715
IR04_14740	PWY-7205	CMP phosphorylation
IR04_14835	PWY-5667	CDP-diacylglycerol biosynthesis I
IR04_14835	PWY-5981	CDP-diacylglycerol biosynthesis III
IR04_14835	PWY-7817	IR04_14835
IR04_14870	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
IR04_14870	PWY-2201	folate transformations I
IR04_14870	PWY-3841	folate transformations II
IR04_14870	PWY-5030	L-histidine degradation III
IR04_14870	PWY-5497	purine nucleobases degradation II (anaerobic)
IR04_14870	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
IR04_14870	PWY-7909	IR04_14870
IR04_14910	PWY-6855	chitin degradation I (archaea)
IR04_14910	PWY-6902	chitin degradation II
IR04_14910	PWY-7822	IR04_14910
IR04_15000	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
IR04_15005	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
IR04_15010	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
IR04_15015	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
IR04_15020	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
IR04_15025	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
IR04_15025	PWY-5901	2,3-dihydroxybenzoate biosynthesis
IR04_15025	PWY-6406	salicylate biosynthesis I
IR04_15100	PWY-2201	folate transformations I
IR04_15100	PWY-5497	purine nucleobases degradation II (anaerobic)
IR04_15100	PWY-7909	IR04_15100
IR04_15135	PWY-1042	glycolysis IV (plant cytosol)
IR04_15135	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_15135	PWY-6901	superpathway of glucose and xylose degradation
IR04_15135	PWY-7003	glycerol degradation to butanol
IR04_15175	PWY-1042	glycolysis IV (plant cytosol)
IR04_15175	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
IR04_15175	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_15175	PWY-5723	Rubisco shunt
IR04_15175	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_15175	PWY-6886	1-butanol autotrophic biosynthesis
IR04_15175	PWY-6901	superpathway of glucose and xylose degradation
IR04_15175	PWY-7003	glycerol degradation to butanol
IR04_15175	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
IR04_15175	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
IR04_15220	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
IR04_15220	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
IR04_15220	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
IR04_15220	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
IR04_15220	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
IR04_15220	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
IR04_15230	PWY-6543	4-aminobenzoate biosynthesis
IR04_15245	PWY-5367	petroselinate biosynthesis
IR04_15245	PWY-5971	palmitate biosynthesis II (bacteria and plants)
IR04_15245	PWY-5973	<i>cis</i>-vaccenate biosynthesis
IR04_15245	PWY-5989	stearate biosynthesis II (bacteria and plants)
IR04_15245	PWY-5994	palmitate biosynthesis I (animals and fungi)
IR04_15245	PWY-6113	superpathway of mycolate biosynthesis
IR04_15245	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
IR04_15245	PWY-6519	8-amino-7-oxononanoate biosynthesis I
IR04_15245	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
IR04_15245	PWY-7663	gondoate biosynthesis (anaerobic)
IR04_15245	PWY-7664	oleate biosynthesis IV (anaerobic)
IR04_15245	PWY-7858	IR04_15245
IR04_15245	PWYG-321	mycolate biosynthesis
IR04_15250	PWY-4381	fatty acid biosynthesis initiation I
IR04_15250	PWY-6799	fatty acid biosynthesis (plant mitochondria)
IR04_15250	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
IR04_15255	PWY-4381	fatty acid biosynthesis initiation I
IR04_15305	PWY-3162	L-tryptophan degradation V (side chain pathway)
IR04_15305	PWY-5057	L-valine degradation II
IR04_15305	PWY-5076	L-leucine degradation III
IR04_15305	PWY-5078	L-isoleucine degradation II
IR04_15305	PWY-5079	L-phenylalanine degradation III
IR04_15305	PWY-5082	L-methionine degradation III
IR04_15305	PWY-5480	pyruvate fermentation to ethanol I
IR04_15305	PWY-5486	pyruvate fermentation to ethanol II
IR04_15305	PWY-5751	phenylethanol biosynthesis
IR04_15305	PWY-6313	serotonin degradation
IR04_15305	PWY-6333	acetaldehyde biosynthesis I
IR04_15305	PWY-6342	noradrenaline and adrenaline degradation
IR04_15305	PWY-6587	pyruvate fermentation to ethanol III
IR04_15305	PWY-6802	salidroside biosynthesis
IR04_15305	PWY-6871	3-methylbutanol biosynthesis
IR04_15305	PWY-7013	L-1,2-propanediol degradation
IR04_15305	PWY-7111	pyruvate fermentation to isobutanol (engineered)
IR04_15305	PWY-7118	chitin degradation to ethanol
IR04_15305	PWY-7396	butanol and isobutanol biosynthesis (engineered)
IR04_15315	PWY-2941	L-lysine biosynthesis II
IR04_15315	PWY-2942	L-lysine biosynthesis III
IR04_15315	PWY-5097	L-lysine biosynthesis VI
IR04_15315	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_15315	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
IR04_15315	PWY-6559	spermidine biosynthesis II
IR04_15315	PWY-6562	norspermidine biosynthesis
IR04_15315	PWY-7153	grixazone biosynthesis
IR04_15315	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_15315	PWY-7977	IR04_15315
IR04_15370	PWY-6854	ethylene biosynthesis III (microbes)
IR04_15555	PWY-5392	reductive TCA cycle II
IR04_15555	PWY-5537	pyruvate fermentation to acetate V
IR04_15555	PWY-5538	pyruvate fermentation to acetate VI
IR04_15555	PWY-5690	TCA cycle II (plants and fungi)
IR04_15555	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_15555	PWY-6728	methylaspartate cycle
IR04_15555	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_15555	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
IR04_15560	PWY-5392	reductive TCA cycle II
IR04_15560	PWY-5537	pyruvate fermentation to acetate V
IR04_15560	PWY-5538	pyruvate fermentation to acetate VI
IR04_15560	PWY-5690	TCA cycle II (plants and fungi)
IR04_15560	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_15560	PWY-6728	methylaspartate cycle
IR04_15560	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_15560	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
IR04_15565	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
IR04_15570	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
IR04_15575	PWY-3781	aerobic respiration I (cytochrome c)
IR04_15575	PWY-4302	aerobic respiration III (alternative oxidase pathway)
IR04_15575	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
IR04_15575	PWY-5690	TCA cycle II (plants and fungi)
IR04_15575	PWY-6728	methylaspartate cycle
IR04_15575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_15575	PWY-7254	TCA cycle VII (acetate-producers)
IR04_15575	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
IR04_15580	PWY-3781	aerobic respiration I (cytochrome c)
IR04_15580	PWY-4302	aerobic respiration III (alternative oxidase pathway)
IR04_15580	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
IR04_15580	PWY-5690	TCA cycle II (plants and fungi)
IR04_15580	PWY-6728	methylaspartate cycle
IR04_15580	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_15580	PWY-7254	TCA cycle VII (acetate-producers)
IR04_15580	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
IR04_15615	PWY-2723	trehalose degradation V
IR04_15615	PWY-3801	sucrose degradation II (sucrose synthase)
IR04_15615	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
IR04_15615	PWY-5661	GDP-glucose biosynthesis
IR04_15615	PWY-5940	streptomycin biosynthesis
IR04_15615	PWY-5941	glycogen degradation II (eukaryotic)
IR04_15615	PWY-622	starch biosynthesis
IR04_15615	PWY-6317	galactose degradation I (Leloir pathway)
IR04_15615	PWY-6731	starch degradation III
IR04_15615	PWY-6737	starch degradation V
IR04_15615	PWY-6749	CMP-legionaminate biosynthesis I
IR04_15615	PWY-6981	chitin biosynthesis
IR04_15615	PWY-7238	sucrose biosynthesis II
IR04_15615	PWY-7343	UDP-glucose biosynthesis
IR04_15615	PWY-7900	IR04_15615
IR04_15615	PWY-7902	IR04_15615
IR04_15665	PWY-2941	L-lysine biosynthesis II
IR04_15665	PWY-2942	L-lysine biosynthesis III
IR04_15665	PWY-5097	L-lysine biosynthesis VI
IR04_15665	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_15665	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
IR04_15665	PWY-6559	spermidine biosynthesis II
IR04_15665	PWY-6562	norspermidine biosynthesis
IR04_15665	PWY-7153	grixazone biosynthesis
IR04_15665	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_15665	PWY-7977	IR04_15665
IR04_15680	PWY-7892	IR04_15680
IR04_15705	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
IR04_15770	PWY-7980	IR04_15770
IR04_15890	PWY-2941	L-lysine biosynthesis II
IR04_15890	PWY-2942	L-lysine biosynthesis III
IR04_15890	PWY-5097	L-lysine biosynthesis VI
IR04_15925	PWY-4202	arsenate detoxification I (glutaredoxin)
IR04_15925	PWY-4621	arsenate detoxification II (glutaredoxin)
IR04_15960	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
IR04_15960	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
IR04_15985	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
IR04_15995	PWY-7560	methylerythritol phosphate pathway II
IR04_16005	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
IR04_16225	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
IR04_16240	PWY-6902	chitin degradation II
IR04_16240	PWY-7822	IR04_16240
IR04_16240	PWY-7883	IR04_16240
IR04_16275	PWY-7183	pyrimidine nucleobases salvage I
IR04_16280	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
IR04_16280	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
IR04_16280	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
IR04_16285	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
IR04_16285	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
IR04_16295	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
IR04_16300	PWY-7094	fatty acid salvage
IR04_16300	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
IR04_16325	PWY-5386	methylglyoxal degradation I
IR04_16360	PWY-4381	fatty acid biosynthesis initiation I
IR04_16360	PWY-5743	3-hydroxypropanoate cycle
IR04_16360	PWY-5744	glyoxylate assimilation
IR04_16360	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
IR04_16360	PWY-6722	candicidin biosynthesis
IR04_16385	PWY-5971	palmitate biosynthesis II (bacteria and plants)
IR04_16385	PWY-5973	<i>cis</i>-vaccenate biosynthesis
IR04_16385	PWY-5989	stearate biosynthesis II (bacteria and plants)
IR04_16385	PWY-5994	palmitate biosynthesis I (animals and fungi)
IR04_16385	PWY-6113	superpathway of mycolate biosynthesis
IR04_16385	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
IR04_16385	PWY-6519	8-amino-7-oxononanoate biosynthesis I
IR04_16385	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
IR04_16385	PWY-7663	gondoate biosynthesis (anaerobic)
IR04_16385	PWY-7664	oleate biosynthesis IV (anaerobic)
IR04_16385	PWY-7858	IR04_16385
IR04_16385	PWYG-321	mycolate biosynthesis
IR04_16410	PWY-7560	methylerythritol phosphate pathway II
IR04_16415	PWY-5667	CDP-diacylglycerol biosynthesis I
IR04_16415	PWY-5981	CDP-diacylglycerol biosynthesis III
IR04_16415	PWY-7817	IR04_16415
IR04_16445	PWY-7799	IR04_16445
IR04_16445	PWY-7800	IR04_16445
IR04_16460	PWY-5269	cardiolipin biosynthesis II
IR04_16460	PWY-5668	cardiolipin biosynthesis I
IR04_16460	PWY-7817	IR04_16460
IR04_16465	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
IR04_16465	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
IR04_16465	PWY-6896	thiamin salvage I
IR04_16465	PWY-6897	thiamin salvage II
IR04_16475	PWY-6167	flavin biosynthesis II (archaea)
IR04_16475	PWY-6168	flavin biosynthesis III (fungi)
IR04_16480	PWY-6167	flavin biosynthesis II (archaea)
IR04_16480	PWY-6168	flavin biosynthesis III (fungi)
IR04_16480	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
IR04_16480	PWY-7991	IR04_16480
IR04_16485	PWY-6167	flavin biosynthesis II (archaea)
IR04_16485	PWY-6168	flavin biosynthesis III (fungi)
IR04_16485	PWY-7980	IR04_16485
IR04_16490	PWY-7991	IR04_16490
IR04_16500	PWY-3341	L-proline biosynthesis III
IR04_16500	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
IR04_16505	PWY-3341	L-proline biosynthesis III
IR04_16505	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
IR04_16670	PWY-6654	phosphopantothenate biosynthesis III
IR04_16680	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
IR04_16705	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_16795	PWY-6807	xyloglucan degradation II (exoglucanase)
IR04_16840	PWY-4202	arsenate detoxification I (glutaredoxin)
IR04_16840	PWY-5532	adenosine nucleotides degradation IV
IR04_16840	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
IR04_16840	PWY-6608	guanosine nucleotides degradation III
IR04_16840	PWY-6609	adenine and adenosine salvage III
IR04_16840	PWY-6611	adenine and adenosine salvage V
IR04_16840	PWY-6620	guanine and guanosine salvage
IR04_16840	PWY-6627	salinosporamide A biosynthesis
IR04_16840	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
IR04_16840	PWY-7179	purine deoxyribonucleosides degradation I
IR04_16840	PWY-7179-1	purine deoxyribonucleosides degradation
IR04_16845	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
IR04_16850	PWY-7181	pyrimidine deoxyribonucleosides degradation
IR04_16855	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
IR04_16910	PWY-702	L-methionine biosynthesis II
IR04_16915	PWY-2941	L-lysine biosynthesis II
IR04_16915	PWY-2942	L-lysine biosynthesis III
IR04_16915	PWY-5097	L-lysine biosynthesis VI
IR04_16915	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
IR04_16915	PWY-6559	spermidine biosynthesis II
IR04_16915	PWY-6562	norspermidine biosynthesis
IR04_16915	PWY-7153	grixazone biosynthesis
IR04_16915	PWY-7977	IR04_16915
IR04_16980	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
IR04_16980	PWY-6153	autoinducer AI-2 biosynthesis I
IR04_16980	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
IR04_17035	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_17035	PWY-5686	UMP biosynthesis
IR04_17035	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_17035	PWY-7790	IR04_17035
IR04_17035	PWY-7791	IR04_17035
IR04_17040	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_17040	PWY-5686	UMP biosynthesis
IR04_17040	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_17040	PWY-7790	IR04_17040
IR04_17040	PWY-7791	IR04_17040
IR04_17050	PWY-2941	L-lysine biosynthesis II
IR04_17050	PWY-2942	L-lysine biosynthesis III
IR04_17050	PWY-5097	L-lysine biosynthesis VI
IR04_17055	PWY-6502	oxidized GTP and dGTP detoxification
IR04_17090	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
IR04_17090	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
IR04_17090	PWY-7953	IR04_17090
IR04_17095	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_17095	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
IR04_17095	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
IR04_17095	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_17100	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_17100	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
IR04_17100	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
IR04_17100	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_17105	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
IR04_17105	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
IR04_17110	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_17110	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
IR04_17110	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_17115	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
IR04_17115	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
IR04_17115	PWY-7953	IR04_17115
IR04_17125	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_17125	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_17140	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
IR04_17140	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
IR04_17150	PWY-6891	thiazole biosynthesis II (Bacillus)
IR04_17150	PWY-6892	thiazole biosynthesis I (E. coli)
IR04_17150	PWY-7560	methylerythritol phosphate pathway II
IR04_17165	PWY-7805	IR04_17165
IR04_17165	PWY-7807	IR04_17165
IR04_17190	PWY-5316	nicotine biosynthesis
IR04_17190	PWY-5381	pyridine nucleotide cycling (plants)
IR04_17190	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
IR04_17190	PWY-7342	superpathway of nicotine biosynthesis
IR04_17215	PWY-7851	IR04_17215
IR04_17325	PWY-1042	glycolysis IV (plant cytosol)
IR04_17325	PWY-1622	formaldehyde assimilation I (serine pathway)
IR04_17325	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
IR04_17325	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_17325	PWY-5723	Rubisco shunt
IR04_17325	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_17325	PWY-6886	1-butanol autotrophic biosynthesis
IR04_17325	PWY-6901	superpathway of glucose and xylose degradation
IR04_17325	PWY-7003	glycerol degradation to butanol
IR04_17325	PWY-7124	ethylene biosynthesis V (engineered)
IR04_17325	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
IR04_17330	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
IR04_17330	PWY-7177	UTP and CTP dephosphorylation II
IR04_17330	PWY-7185	UTP and CTP dephosphorylation I
IR04_17375	PWY-6012	acyl carrier protein metabolism I
IR04_17375	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
IR04_17375	PWY-6289	petrobactin biosynthesis
IR04_17430	PWY-5316	nicotine biosynthesis
IR04_17430	PWY-7342	superpathway of nicotine biosynthesis
IR04_17480	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
IR04_17480	PWY-5723	Rubisco shunt
IR04_17490	PWY-5101	L-isoleucine biosynthesis II
IR04_17490	PWY-5103	L-isoleucine biosynthesis III
IR04_17490	PWY-5104	L-isoleucine biosynthesis IV
IR04_17490	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
IR04_17490	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
IR04_17490	PWY-6389	(<i>S</i>)-acetoin biosynthesis
IR04_17490	PWY-7111	pyruvate fermentation to isobutanol (engineered)
IR04_17495	PWY-5101	L-isoleucine biosynthesis II
IR04_17495	PWY-5103	L-isoleucine biosynthesis III
IR04_17495	PWY-5104	L-isoleucine biosynthesis IV
IR04_17495	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
IR04_17495	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
IR04_17495	PWY-6389	(<i>S</i>)-acetoin biosynthesis
IR04_17495	PWY-7111	pyruvate fermentation to isobutanol (engineered)
IR04_17525	PWY-6871	3-methylbutanol biosynthesis
IR04_17530	PWY-7396	butanol and isobutanol biosynthesis (engineered)
IR04_17650	PWY-4981	L-proline biosynthesis II (from arginine)
IR04_17650	PWY-4984	urea cycle
IR04_17650	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_17660	PWY-5686	UMP biosynthesis
IR04_17660	PWY-7790	IR04_17660
IR04_17660	PWY-7791	IR04_17660
IR04_17675	PWY-5667	CDP-diacylglycerol biosynthesis I
IR04_17675	PWY-5981	CDP-diacylglycerol biosynthesis III
IR04_17675	PWY-6453	stigma estolide biosynthesis
IR04_17675	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
IR04_17675	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
IR04_17675	PWY-7587	oleate biosynthesis III (cyanobacteria)
IR04_17675	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
IR04_17675	PWY-7782	IR04_17675
IR04_17680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
IR04_17680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
IR04_17680	PWY-7953	IR04_17680
IR04_17725	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
IR04_17725	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
IR04_17805	PWY-7883	IR04_17805
IR04_17810	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_17815	PWY-7805	IR04_17815
IR04_17815	PWY-7807	IR04_17815
IR04_17875	PWY-5340	sulfate activation for sulfonation
IR04_17880	PWY-5278	sulfite oxidation III
IR04_17880	PWY-5340	sulfate activation for sulfonation
IR04_17880	PWY-6683	sulfate reduction III (assimilatory)
IR04_17880	PWY-6932	selenate reduction
IR04_17885	PWY-5278	sulfite oxidation III
IR04_17885	PWY-5340	sulfate activation for sulfonation
IR04_17885	PWY-6683	sulfate reduction III (assimilatory)
IR04_17885	PWY-6932	selenate reduction
IR04_17890	PWY-5194	siroheme biosynthesis
IR04_17890	PWY-5196	factor 430 biosynthesis
IR04_17890	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
IR04_18095	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
IR04_18120	PWY-7731	IR04_18120
IR04_18145	PWY-5723	Rubisco shunt
IR04_18175	PWY-5958	acridone alkaloid biosynthesis
IR04_18175	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
IR04_18175	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
IR04_18200	PWY-181	photorespiration
IR04_18205	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
IR04_18205	PWY-5723	Rubisco shunt
IR04_18220	PWY-6164	3-dehydroquinate biosynthesis I
IR04_18225	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
IR04_18255	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
IR04_18255	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
IR04_18255	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
IR04_18255	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
IR04_18270	PWY-6854	ethylene biosynthesis III (microbes)
IR04_18280	PWY-4983	L-citrulline-nitric oxide cycle
IR04_18280	PWY-4984	urea cycle
IR04_18280	PWY-5	canavanine biosynthesis
IR04_18280	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_18280	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_18285	PWY-4983	L-citrulline-nitric oxide cycle
IR04_18285	PWY-4984	urea cycle
IR04_18285	PWY-5	canavanine biosynthesis
IR04_18285	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_18285	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_18290	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_18290	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_18295	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_18295	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
IR04_18300	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
IR04_18305	PWY-1622	formaldehyde assimilation I (serine pathway)
IR04_18305	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
IR04_18305	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_18305	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_18305	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
IR04_18305	PWY-6549	L-glutamine biosynthesis III
IR04_18305	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
IR04_18305	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
IR04_18305	PWY-7124	ethylene biosynthesis V (engineered)
IR04_18315	PWY-6936	seleno-amino acid biosynthesis
IR04_18315	PWY-7274	D-cycloserine biosynthesis
IR04_18315	PWY-7870	IR04_18315
IR04_18320	PWY-5667	CDP-diacylglycerol biosynthesis I
IR04_18320	PWY-5981	CDP-diacylglycerol biosynthesis III
IR04_18320	PWY-7902	IR04_18320
IR04_18340	PWY-5392	reductive TCA cycle II
IR04_18340	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_18340	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
IR04_18345	PWY-3781	aerobic respiration I (cytochrome c)
IR04_18345	PWY-4302	aerobic respiration III (alternative oxidase pathway)
IR04_18345	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
IR04_18345	PWY-5690	TCA cycle II (plants and fungi)
IR04_18345	PWY-6728	methylaspartate cycle
IR04_18345	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_18345	PWY-7254	TCA cycle VII (acetate-producers)
IR04_18345	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
IR04_18405	PWY-1042	glycolysis IV (plant cytosol)
IR04_18405	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_18405	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
IR04_18405	PWY-7003	glycerol degradation to butanol
IR04_18420	PWY-5839	menaquinol-7 biosynthesis
IR04_18420	PWY-5851	demethylmenaquinol-9 biosynthesis
IR04_18420	PWY-5852	demethylmenaquinol-8 biosynthesis I
IR04_18420	PWY-5853	demethylmenaquinol-6 biosynthesis I
IR04_18420	PWY-5890	menaquinol-10 biosynthesis
IR04_18420	PWY-5891	menaquinol-11 biosynthesis
IR04_18420	PWY-5892	menaquinol-12 biosynthesis
IR04_18420	PWY-5895	menaquinol-13 biosynthesis
IR04_18465	PWY-801	L-homocysteine and L-cysteine interconversion
IR04_18470	PWY-2941	L-lysine biosynthesis II
IR04_18470	PWY-2942	L-lysine biosynthesis III
IR04_18470	PWY-5097	L-lysine biosynthesis VI
IR04_18470	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
IR04_18470	PWY-6559	spermidine biosynthesis II
IR04_18470	PWY-6562	norspermidine biosynthesis
IR04_18470	PWY-7153	grixazone biosynthesis
IR04_18470	PWY-7977	IR04_18470
IR04_18480	PWY-2201	folate transformations I
IR04_18480	PWY-3841	folate transformations II
IR04_18490	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_18495	PWY-1042	glycolysis IV (plant cytosol)
IR04_18495	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
IR04_18495	PWY-5484	glycolysis II (from fructose 6-phosphate)
IR04_18495	PWY-7385	1,3-propanediol biosynthesis (engineered)
IR04_18520	PWY-6854	ethylene biosynthesis III (microbes)
IR04_18540	PWY-5392	reductive TCA cycle II
IR04_18540	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
IR04_18540	PWY-5690	TCA cycle II (plants and fungi)
IR04_18540	PWY-5913	TCA cycle VI (obligate autotrophs)
IR04_18540	PWY-6728	methylaspartate cycle
IR04_18540	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
IR04_18540	PWY-7254	TCA cycle VII (acetate-producers)
IR04_18540	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
IR04_18590	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
IR04_18640	PWY-6519	8-amino-7-oxononanoate biosynthesis I
IR04_18735	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
IR04_18735	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
IR04_18775	PWY-381	nitrate reduction II (assimilatory)
IR04_18775	PWY-5675	nitrate reduction V (assimilatory)
IR04_18775	PWY-6549	L-glutamine biosynthesis III
IR04_18775	PWY-6963	ammonia assimilation cycle I
IR04_18775	PWY-6964	ammonia assimilation cycle II
IR04_18805	PWY-6609	adenine and adenosine salvage III
IR04_18805	PWY-6611	adenine and adenosine salvage V
IR04_18805	PWY-7179	purine deoxyribonucleosides degradation I
IR04_18805	PWY-7179-1	purine deoxyribonucleosides degradation
IR04_18885	PWY-1361	benzoyl-CoA degradation I (aerobic)
IR04_18885	PWY-5109	2-methylbutanoate biosynthesis
IR04_18885	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
IR04_18885	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
IR04_18885	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
IR04_18885	PWY-5177	glutaryl-CoA degradation
IR04_18885	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
IR04_18885	PWY-6435	4-hydroxybenzoate biosynthesis V
IR04_18885	PWY-6583	pyruvate fermentation to butanol I
IR04_18885	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
IR04_18885	PWY-6863	pyruvate fermentation to hexanol
IR04_18885	PWY-6883	pyruvate fermentation to butanol II
IR04_18885	PWY-6944	androstenedione degradation
IR04_18885	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
IR04_18885	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
IR04_18885	PWY-7007	methyl ketone biosynthesis
IR04_18885	PWY-7046	4-coumarate degradation (anaerobic)
IR04_18885	PWY-7094	fatty acid salvage
IR04_18885	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
IR04_18885	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
IR04_18885	PWY-7292	oleate &beta;-oxidation (thioesterase-dependent, yeast)
IR04_18885	PWY-7307	oleate &beta;-oxidation (reductase-dependent, yeast)
IR04_18885	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
IR04_18885	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
IR04_18885	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
IR04_18885	PWY-735	jasmonic acid biosynthesis
IR04_18885	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
IR04_18885	PWY-7606	docosahexaenoate biosynthesis III (mammals)
IR04_18885	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
IR04_18885	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
IR04_18885	PWY-7726	IR04_18885
IR04_18885	PWY-7778	IR04_18885
IR04_18885	PWY-7779	IR04_18885
IR04_18890	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
IR04_18890	PWY-6435	4-hydroxybenzoate biosynthesis V
IR04_18890	PWY-6863	pyruvate fermentation to hexanol
IR04_18890	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
IR04_18890	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
IR04_18890	PWY-6948	sitosterol degradation to androstenedione
IR04_18890	PWY-7094	fatty acid salvage
IR04_18890	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
IR04_18890	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
IR04_18890	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
IR04_18890	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
IR04_18890	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
IR04_18890	PWY-735	jasmonic acid biosynthesis
IR04_18890	PWY-7606	docosahexaenoate biosynthesis III (mammals)
IR04_18890	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
IR04_18890	PWY-7726	IR04_18890
IR04_18905	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
IR04_18915	PWY-7980	IR04_18915
IR04_18925	PWY-7980	IR04_18925