  IR04_00005    3129 ..    3147 +  -4.5  -3.60627   TGAAGCGAAGTAGTG             CTGGATC ATCGC GACCCAG             TTTACCGTCACATCG  57 44
  IR04_00015    4433 ..    4459 +   -11  -3.08133   ACTTTTTGATAATGT         TCGGGAGTTA ACAAACG TAACTCCCGA         TTGAATGCGTACGTA  79 107
  IR04_00020    4794 ..    4805 +  -4.4  -3.51597   TCTGAACTCACTCAA                TGAG CTGG CTCA                 TTCTGGTTGCCGCTT  52 96
  IR04_00025    5583 ..    5599 +  -3.7  -3.80573   CTGGTACCAAACCTT              TTGTGGA TAT TCTGCAA              TTTAATCATCGTGCG  56 78
  IR04_00030    6754 ..    6766 +  -6.3  -3.86897   ATCGCTTCATTGCCT                TTACG CAC CGTAA                TTTGTGCACCATCAA  66 259
        dnaA NONE
  IR04_00040 NONE
  IR04_04980    9951 ..    9961 +  -3.2  -2.59177   ACAGTGCCATGTACG                 TGGT CAT GCCA                 ATTCGTCTGTAAGGT  42 3
        recF NONE
        gyrB NONE
  IR04_04995 NONE
  IR04_00050   14718 ..   14741 +  -6.8  -3.27029   AAGAATGGATCGAGC          GACTTAACAA GTCA TTGTTAAGAC           TATTGCTTAATCAAA  61 19
  IR04_05005 NONE
  IR04_00055   17194 ..   17207 +  -4.5  -2.77167   TTGCCTACACGCTTG               TTGGC AGCA GCCAG                TGCTTCGGCTTCTTC  49 229
  IR04_00060   19480 ..   19499 +  -3.5  -4.16251   CTTCCCAGCCAAGAC            CCCAAGC ACCTAA GGTTGGG             TTTTCCCAGTTGTCT  60 120
  IR04_00065 NONE
  IR04_05025 NONE
  IR04_05030 NONE
  IR04_05040 NONE
  IR04_00070 NONE
  IR04_00075   23383 ..   23400 +  -4.1  -2.74488   AAACCACACAGCACG             CGGCCGTA GTC TGCG-CCG             TGGTTGCGGTAGTTG  46 11
  IR04_00085   27401 ..   27411 +  -2.4  -3.04144   TGGCTGAATCAAGCA                 GGCG CTG CGCG                 TGTTCGCGATGGCGG  42 45
  IR04_00090   28358 ..   28394 +  -7.9  -3.92324   GACGAGATGAAGTTT    TGTGGTGCGCGCGGT TGAATGT GCTGCGCGGCCCACA    TTTGGTGTTGGCCGA  70 498
  IR04_05075 NONE
  IR04_00105 NONE
  IR04_05080   32585 ..   32612 + -12.8  -5.28176   TGAGAGGCTGATAAA        G-CGAAGGGAGCC ATT GGCTCCCTTTGTC        TTTTTTCTCAATACC 100 44
  IR04_00115   35949 ..   35962 +  -9.5  -3.37533   GACTTAATAAAAAAA               GCGGC TTTC GCCGC                TTGCTCATTTTGGGG  74 390
  IR04_05105 NONE
  IR04_00125 NONE
  IR04_00130 NONE
  IR04_05110 NONE
  IR04_05115   38528 ..   38542 +  -8.5  -3.78962   GGGTAAAAGAGGAAA               CGCGC ATTTA GCGCG               TTTCAATCTGTTTGA  75 57
  IR04_00145   42257 ..   42273 +  -7.9   -2.8978   TAATGCCGCGATATC              GTCTGCG CGG CGCAGCC              ATTTGATGTCGGGAT  59 128
  IR04_00155   44149 ..   44174 +  -4.5  -3.12351   CTGGCGGTGAGTTTT         TTGCCGCGCCC CGCT GGGCGCTCCGG          TTGGGTGTAGACCGC  51 148
  IR04_05150 NONE
  IR04_05155 NONE
  IR04_05160 NONE
  IR04_05165   48280 ..   48304 + -17.3  -3.20901   CATCGCATACAAAGT          TAAAGCCGCGT TAG ACGCGGCTTTA          TTGCATTAGTGGGGT 100 53
  IR04_00185   50023 ..   50034 +  -4.4  -4.99861   GGATTTTTTTCTCAA                GCAA ACGT TTGC                 TTTTTCTGGTTGATG  74 54
  IR04_05180 NONE
  IR04_00195 NONE
  IR04_05185 NONE
  IR04_05190 NONE
  IR04_05195 NONE
  IR04_00200 NONE
  IR04_05210 NONE
  IR04_05215   55496 ..   55534 +  -9.8  -4.25283   TCCCGCATAGCTCCA   CCATCTTTAAGCGTTTTC GCT GAGAATGTTTAAAAATGG   TTTTCATCAGAAAAT  93 23
  IR04_05220   58677 ..   58687 +  -2.4  -4.46926   GGCTTAACCATACAA                 CACC CAA GGGG                 TTTTGTAGTGGACTC  61 8
  IR04_05225   58939 ..   58949 +  -2.4  -2.76189   TTTGGTCTAACCAGA                 CAGC GGA GCGG                 TAGTTCAGTCGGTTA  41 47
  IR04_05230 NONE
  IR04_05235   59135 ..   59154 + -12.2  -5.30616   CTGCCATATATCGAA            CCTCAGCA GAAA TGCTGAGG             TTTTTCTTTACCTGC 100 35
  IR04_05240   59890 ..   59900 +  -5.4  -3.99374   AAGAGAAGACTCTCT                 TAGG TGA CCTA                 TTGTTATTAATAGCG  64 177
  IR04_05245 NONE
  IR04_05250 NONE
  IR04_00235 NONE
  IR04_05255 NONE
  IR04_00240 NONE
  IR04_05260 NONE
  IR04_05265 NONE
  IR04_00245 NONE
        thiH NONE
  IR04_00250   66769 ..   66783 +  -2.8  -3.47349   GTCTGGCCAAAACAT               CAAGTT GTG AACCTG               TTGTGCCTTTCGGGA  49 354
  IR04_05285 NONE
  IR04_00265 NONE
  IR04_05290 NONE
  IR04_00270 NONE
  IR04_05300 NONE
  IR04_05305 NONE
  IR04_05310 NONE
  IR04_00275 NONE
  IR04_00280 NONE
  IR04_00285 NONE
  IR04_05325 NONE
  IR04_05330   77823 ..   77843 + -11.2  -5.63504   CGCCCAAGTGAGTAA            GGATGTGC ACTCA GCACATCC            TTTTTTTATGCGATT 100 120
  IR04_05335 NONE
  IR04_00295 NONE
  IR04_00300 NONE
  IR04_05345 NONE
  IR04_00305 NONE
        ubiE NONE
        pstB NONE
  IR04_05355 NONE
        ubiB   84722 ..   84738 +  -2.2  -3.09288   GTAAGCGCCTTGTCG              CGTCGA TAAGT TCGAAG              ATTTGTTCACACATA  43 37
        tatA NONE
  IR04_05370   85438 ..   85451 +  -5.3  -3.45776   AGCGTTTTTTAAGCT               CTCTT TATC AAGAG                TTATCCTAGGTTTCA  57 40
  IR04_05375   86300 ..   86318 + -11.7  -4.89063   GCGTAAAGTCAAGAA             GGGCACC TTATC GGTGCCC             TTTGTTTTTGGATCA 100 61
  IR04_05380   87589 ..   87622 + -11.7  -3.97308   TTAGTTGAGGTAAGC     GCCTGCTGGCTCGGTG TTT TACCT-GCCAGCGGGC     TTTGCTATGTTTCGG 100 37
  IR04_00335   88974 ..   89003 +  -3.5  -3.33509   GACAGGACCATAGGC       AGCGCGATCGCCAG CAC TTGGCGAT-GCACA       TTCGGTTGTTTCAAC  49 42
  IR04_00340   90701 ..   90714 +  -2.4  -4.77122   AGTGCAATGAGAATT               GCAA AGCCAA TTGC                TTGTTTTTTGTGTGA  67 285
  IR04_05400   93421 ..   93447 + -12.4   -4.2803   CAATCGAACCGAATG         AAAAAGGCATCC TGC GGATGCCTTTTC         TTTTGCCTTAAGCTG 100 56
  IR04_00355 NONE
  IR04_05415 NONE
  IR04_00365   96638 ..   96652 +  -2.1  -3.81027   ATCGCCGCTGGAGAG              CGCCGT CATG ACG-CG               TTTGACTTCATTGAC  52 1
  IR04_00370   97399 ..   97428 +    -5  -3.72576   CTTGGGGTGTGAGGT       CTGACTCTGGCGT GGTGA GCGCAAG-GTCAG       TTTGATAAGGCGCAA  57 281
  IR04_00390  100766 ..  100776 +  -5.4  -4.57569   TGCCCAGCACTTCCC                 TCAG CAC CTGA                 TTTTTCAGGCACTGA  73 296
  IR04_05445  101889 ..  101906 + -11.3  -4.65838   TAAAGCAAAGCTCAA             GGCTGAC GTAA GTCAGCC              TTTTTAACATCTCTA 100 58
  IR04_00405 NONE
  IR04_05450  102400 ..  102414 +  -4.3  -3.77087   GCTCTAAAAAATAAA               TGAGA TTTTT TCTCA               TTTGGGTGTTGACTA  57 34
  IR04_00410 NONE
  IR04_00415 NONE
  IR04_05455 NONE
  IR04_00425 NONE
  IR04_00430  108108 ..  108141 +  -8.9  -4.91712   ACGAGCAAAGATGAC     TAAACAGCCCTAGTG ACCT TACTAGGGCTGTTGC      TTTTTATGGCTTGCC 100 242
  IR04_05470 NONE
  IR04_05475 NONE
  IR04_05480 NONE
  IR04_05485 NONE
  IR04_00450  112800 ..  112822 +    -7  -3.14229   CACTGCGGCGCAAGC           GTTCGTTGAT CAC ATCGGCGAGC           TGTTGCTGAGCCTGT  60 176
  IR04_00460  115487 ..  115507 +  -3.3  -3.55444   ATCGGCGCGCCCTTC           GAGCATGG CAATTT CCA-GCTC            TTTCACGAATAAGCC  50 86
  IR04_00465 NONE
  IR04_00470 NONE
        cyaA NONE
  IR04_00475 NONE
  IR04_00480 NONE
  IR04_05530 NONE
  IR04_00485 NONE
        dapF NONE
  IR04_05540 NONE
  IR04_00490 NONE
  IR04_05545 NONE
  IR04_00495 NONE
  IR04_05550 NONE
  IR04_00500 NONE
  IR04_00505 NONE
  IR04_00510 NONE
  IR04_05555 NONE
  IR04_00515 NONE
  IR04_00520  130376 ..  130394 +  -7.4  -2.71144   CTATTTGTCTATCTT             CAGTCAGA CGT TCTGACCG             TCCTTGACCACGGTG  58 19
  IR04_00525 NONE
        rhtB NONE
  IR04_00530 NONE
  IR04_05585 NONE
  IR04_05600 NONE
  IR04_05610 NONE
  IR04_05615 NONE
  IR04_00535 NONE
  IR04_00540 NONE
  IR04_05630 NONE
  IR04_05635 NONE
  IR04_05640 NONE
  IR04_00545 NONE
  IR04_05645  140899 ..  140918 +   -10   -5.4492   AGCTTGATAAGAAAA            GGTCTGGT CAAT GCCAGACC             TTTTTTGTCTCTATC 100 57
  IR04_00560 NONE
  IR04_05655 NONE
  IR04_00565 NONE
  IR04_05660 NONE
        rbsC  144672 ..  144686 +  -2.8  -2.84602   GAAACAGTTTATGGC               GCAG AATAGGG CTGC               CTTTCATCGCATCCA  42 60
  IR04_00575 NONE
  IR04_00580 NONE
  IR04_05670 NONE
  IR04_00585  147715 ..  147726 +  -5.8  -4.62054   CTTTGGTTGATCGGT                CGCT AAGC AGCG                 TTTTGATTTGATTCG  75 90
  IR04_00590 NONE
  IR04_00595 NONE
  IR04_00600 NONE
  IR04_00605 NONE
  IR04_05680  150084 ..  150096 +  -7.7   -3.1149   TCCGATTTAGGATCA                TTCGC AAT GCGAA                CTTTTAACGTTCGCT  63 31
  IR04_05690 NONE
  IR04_05695  152738 ..  152776 +  -9.8  -4.25283   CTCCCCTACGGGATA   CCATCTTTAAGCGTTTTC GCT GAGAATGTTTAAAAATGG   TTTTCATCAGAAAAT  93 23
  IR04_05700  155919 ..  155929 +  -2.4  -4.46926   GGCTTAACCATACAA                 CACC CAA GGGG                 TTTTGTAGTGGACTC  61 8
  IR04_05705  156178 ..  156189 +  -2.2  -3.02043   TTAATCTCGCTGATA                GTGT CACC ACGC                 TATTAGCACACAATT  42 43
  IR04_05710  156310 ..  156331 + -15.9  -4.79756   GCCACTATTAAGAAA           GGCCGCTGA CAAC TCAGCGGCC            TTTTTGCATTCTGTC 100 37
  IR04_00635 NONE
  IR04_05720  158984 ..  159005 + -13.1  -4.69214   AATAAAAACCAAGAA           GGCTTAGTC GAAT GACTAAGCC            TTTCTTTATTGAGTG 100 82
  IR04_00645  160224 ..  160249 +  -6.1  -3.21912   GTGGGATCACTTTGC         CATCTGCTGCG CGAA CGTAGTAGCTG          TTCATCGATTCAGGG  57 49
  IR04_00650 NONE
  IR04_00655  163831 ..  163870 +  -4.2   -5.2422   TTGAAAATTCCCTGC  TGCTTTCCTTGGTCGAAC AACA GTTCGACTTTGGCAAACA   TTTTTTGCTCTAGTT  80 133
  IR04_05745 NONE
  IR04_05755 NONE
  IR04_05760 NONE
  IR04_05765 NONE
  IR04_05770 NONE
  IR04_05775 NONE
  IR04_00660 NONE
  IR04_05780 NONE
  IR04_00665 NONE
  IR04_00670 NONE
  IR04_05785 NONE
  IR04_05790  171912 ..  171937 + -14.1  -3.67611   ATCTCGGACCACTCT         GCTCTGTAGGC GTTG GTCTACAGAGC          TTCTCTTCGGGTACA 100 40
  IR04_05795 NONE
  IR04_05800  174013 ..  174034 + -10.9  -5.59564   CTCTCCATAAACTAA           GAGCCGTAT TTGA ATGCGGCTC            TTTTTTTGCATTTAT 100 68
  IR04_05805  175136 ..  175157 + -14.5  -4.65895   AAAAATCGATAAAAA           GAAAGCGGC GATG GCCGCTTTC            TTTTTGAGTAGAACG 100 69
  IR04_05825  178645 ..  178662 +  -4.1  -4.03234   ATCTGTAGTGTCAAA             GACACAA TATG TAGTGTC              TTTCTGTGGAGGAAA  60 244
  IR04_05835 NONE
  IR04_00725 NONE
  IR04_05840 NONE
  IR04_05845 NONE
  IR04_05850 NONE
  IR04_00740  184194 ..  184213 +  -4.3  -4.47686   TTCCTTATTTTCGGT            GAGTTCCG GATAG CGGA-CTC            TTTGATTTTTTGTAC  66 208
  IR04_00745  184450 ..  184462 +  -3.4  -3.68529   TTGTGGAGAACTTTT                TCAG CAGCT CTGA                TTTGGGTAATGAAAT  53 6
  IR04_05885 NONE
  IR04_00785 NONE
  IR04_00790 NONE
        uvrD  196407 ..  196417 +  -2.4  -4.07885   GAATAGTGCGGCGAC                 GTGG CTC CCCC                 TTTTAGGGGGAGGTC  55 44
  IR04_00800  197909 ..  197920 +  -5.8  -3.59627   CAAAGAAGGCGAAAG                GCCA TAAG TGGC                 TTTGAAGGCTTTACT  61 124
  IR04_00805  199447 ..  199462 +  -3.2   -3.5774   GCGGATTGCCTGCTG              GCGC ACTGGTCA GCGC               TTTGCCGGGTTGGAT  51 179
  IR04_00810  200499 ..  200515 +  -7.9  -3.34895   GTGGCTTGTTCTGGC              GCAACCG CAT CGGTGGC              TTGATTCGGGGTAGC  66 184
  IR04_00820 NONE
  IR04_05915 NONE
  IR04_05920  203990 ..  204002 +  -5.5   -4.4352   GCGTTGTTCCATCGC                GCGCA GTC TGTGC                TTTCCTTTTATTTTT  70 55
  IR04_00830 NONE
  IR04_05925  204497 ..  204510 +  -9.5  -4.04318   GAGGCGCAGTAAAAA               GCCCC TTGC GGGGC                TTTATCGTGTCTCAA  83 29
  IR04_00835  205175 ..  205189 +  -4.2  -2.69598   TTGCCCGCGCCAGAG               CGGC CGACAAT GCCG               ACTTTTTCTCCGGCT  45 192
  IR04_00840  205593 ..  205603 +  -3.2  -3.16323   GGCGGTAAACCGTGT                 GTAG AAA CTGC                 TTCATACCCGATTTT  46 97
  IR04_00850 NONE
  IR04_00855 NONE
  IR04_05935  208663 ..  208687 + -10.7  -4.64495   TGATTGGCTGCAAGA          CAACTCCCGCT TCT GGCGGGATTTG          TTGTTTTTATTGAAT 100 96
  IR04_05940 NONE
  IR04_05945 NONE
  IR04_00865 NONE
  IR04_05950  212799 ..  212833 +    -7  -3.05935   GCACATGGCTATCTT     GCTCCGTGAGCGCGGT AAT ACCGAGCTTGAGCAGC     TTAAATGCGAGATCT  59 408
  IR04_00880 NONE
        murQ NONE
  IR04_00885 NONE
        murP NONE
  IR04_00890 NONE
  IR04_00895 NONE
        pyrE NONE
  IR04_00900  219973 ..  220004 +  -2.2  -3.66288   GGACTAACAAAATCA      CGCGCTCGCCGCT ATCTAGC AGCGGC-AGCAAG      TTCTCTTCGCCAATC  50 241
  IR04_06010 NONE
  IR04_00925 NONE
  IR04_06015 NONE
        rpmB NONE
        rpmG NONE
  IR04_00930 NONE
  IR04_06030 NONE
  IR04_06035  228494 ..  228511 +  -3.4  -4.70879   TGTGGTACGCAAGCC             GCGGAT CAATAC ATTCGC              TTTTTCGGCTTTGGC  69 341
  IR04_06045 NONE
  IR04_00940  230613 ..  230627 +  -3.4  -2.87527   TTTTCAGTGTAACGA               CGCGCG ACC TGCTCG               GTTTCATCGTGACTG  43 251
  IR04_06060 NONE
  IR04_06065  233881 ..  233907 +  -6.6  -4.13945   CAATCCATGAGTAAG         TTATTGGCCATA AAC TGTGGCCAAAAG         TTTTCACCTAAGCCT  71 234
  IR04_00955  234299 ..  234311 +  -3.3  -3.54129   ACTTAACCGCATAAG                GCGTT TTT ACCGC                TTTCAGCCCCATGTG  50 151
  IR04_00970 NONE
  IR04_00975  241895 ..  241907 +  -3.3   -2.6162   GCGTGAATATTGTTA                CTGGC AAT GCTGG                ATATTTCAAAAATTG  42 160
  IR04_00980 NONE
  IR04_00985  243979 ..  243999 +  -3.3  -2.72463   TTGTTGACATAAAAC            GTTTGATAA AGG TTTTCAAGC            TCATTCACAATCACT  42 94
        cpsB NONE
  IR04_01000 NONE
  IR04_06135 NONE
  IR04_01005 NONE
  IR04_06140 NONE
  IR04_01010 NONE
  IR04_06145 NONE
  IR04_01015 NONE
  IR04_01020 NONE
  IR04_06150 NONE
  IR04_06155 NONE
  IR04_06160 NONE
  IR04_06165 NONE
  IR04_01030 NONE
  IR04_01035 NONE
  IR04_06170 NONE
  IR04_06175 NONE
  IR04_01040 NONE
  IR04_01045 NONE
  IR04_06180 NONE
  IR04_01055 NONE
  IR04_06185 NONE
  IR04_06190 NONE
  IR04_01060  261052 ..  261066 +  -2.1   -3.3782   ATGATTAATCCTGTA               GCTTT GCAAA GAAGC               TTCATTACCTGGATG  45 30
  IR04_06200  263168 ..  263195 +  -7.8  -3.37245   GCTTTGACTGTCAGC        TGGCGGAACA ACTAACCC TGTTTCGCCA         TTGATGTTCACATAA  66 231
  IR04_06215 NONE
  IR04_06220 NONE
  IR04_01105 NONE
  IR04_06225 NONE
  IR04_01110  269802 ..  269817 +  -3.2  -5.03145   TCTCGACCAAGTAGG              GCTCAA GCAG TTGCGC               TTTTTTCAGCGCTTG  75 432
  IR04_01125 NONE
  IR04_06245  272918 ..  272974 + -13.9  -3.35798   GAAAAAGAATTCTCA GAGATAGTCCCCTGTCTATTGAACACA ATT TTTGTTCAATAGACAGGGGGGAAATTC TTATCCGTCAAGGAT 100 54
  IR04_06250 NONE
  IR04_06255  275640 ..  275665 +  -4.7  -3.95555   AAGTTGAAAAATAAA         GGCTCTAAG TGCTAATT CTAAGAGCC          TTTATCCGTCATTAT  61 268
  IR04_06265  277461 ..  277483 + -13.5  -5.38054   AATTGCTTTATACTA           CGCCGAGAT TGAAC ATCTCGGCG           TTTTTGTTTATGAAG 100 39
  IR04_06270  278228 ..  278256 + -13.3  -3.13522   AAAAAACCTATCGAA        TAAAAAAGCGCGA AGT TCGCGCTTTTTTC        TATTGATAAGAAGAT 100 71
  IR04_01165  280511 ..  280527 +  -7.9  -4.11216   CTTCTACATAAAACG              CGGCCGC TTG GTGGCTG              TTTTCGCCATAACGC  73 378
        zntR  281985 ..  281996 +  -4.4  -2.67441   ATGACGTTGTCTGAT                GGTT AAAC AACC                 TAAGTTTGCAATTTT  45 101
  IR04_01185 NONE
  IR04_06295 NONE
  IR04_01195 NONE
        cadB NONE
  IR04_01200 NONE
  IR04_06305 NONE
  IR04_01205  288820 ..  288831 +  -5.8  -2.53894   TCATGGCGGAAGCGA                CGGT ATCC ACCG                 CTTGGTGCTGGTCAT  52 190
  IR04_01210 NONE
  IR04_01215  290624 ..  290641 + -12.7  -2.89981   ACGTTGCATAATCAA             GCTGGCC GTTA GGCCAGC              TCTCCTGTGGTTATC  89 135
  IR04_01225  292136 ..  292150 +  -5.6  -2.85545   TTGCCTTCCACGCCA               TGGCGG AAA CTGCCG               TAATCTTCTTGAGCA  53 182
        idnK NONE
  IR04_06345  297446 ..  297461 + -10.4  -4.72486   TGAAGCATCAAAAAA              GGCGGT GTGT ACCGCC               TTTTTCAGCTTTATC 100 53
  IR04_01250  298843 ..  298864 +  -6.6  -3.97088   GACGCTTTAACAGAG           TCACGCAG TGGCTT TTGCGTGA            TTTGGTCTTGTGAAG  69 242
        gcvT  300198 ..  300212 +  -4.2  -3.78775   GGCCAGTTGGCCGCC               GGGCTT CAG GAGTCC               TTTGATGATCGGAGA  57 223
  IR04_01260 NONE
  IR04_01265  302764 ..  302789 +    -4  -2.73364   GCTGGCACTTTCGCG        GCTGCTGGT-GC TTCT GCTACC-GCGGC         TGCTTGAGCTACCGG  45 139
  IR04_01270  304671 ..  304693 +  -7.6  -2.87586   CACAGAGCCCATAAT           GCGCAAGCTG TCA CGGCTAGTGC           CTTTAATCGCTTCAT  61 517
  IR04_01275 NONE
  IR04_01280  305877 ..  305888 +    -3  -2.96722   CAAACACGAGAGGAG                GAAA TTCG TTTC                 GTTTATAACTCTCAG  44 1
  IR04_01285  306339 ..  306349 +  -2.4  -3.94812   TAAACTCAATCAGTT                 GGAG AAG CGCC                 TCTTTTTCGCTCAGA  53 111
        thrS  308536 ..  308549 +  -3.1  -2.78384   ATTTCCCCTGCCCCT               CCAGA CGAC TTTGG                TCTAATGCAGGCAAC  43 111
  IR04_01295 NONE
  IR04_01300 NONE
        rplT NONE
  IR04_06400  309971 ..  309988 + -11.3  -5.37593   CTCGTTTTAATAGAA             GCCTCTC AATC GAGAGGC              TTTTTTCATTTCGCA 100 69
  IR04_01315 NONE
  IR04_01320 NONE
  IR04_01325 NONE
  IR04_06405 NONE
  IR04_01330  313836 ..  313850 +  -2.8  -3.04144   AGTGCATATTGTTCA               GGTAAC GAA GTTAAC               TGTTCGCGATAGCGA  43 47
  IR04_01335 NONE
  IR04_01340  315642 ..  315658 +  -3.7  -2.87132   TGCGCGATCTGGCCA              CTCTTCT TCG ATAAGAG              TCTGTAGCAGCGCCA  45 165
  IR04_01345  316010 ..  316026 +  -3.7  -3.45776   TATCGACGCCACTTT              GCAATTT TGC GAGTTGC              TTATCATAGCTTTCG  51 49
  IR04_01350 NONE
  IR04_06420  316859 ..  316880 + -11.7  -5.26119   AGTCAGACCGCCAAG           CCGTACATA GCAA TATGTACGG            TTTTGTTTTTGGCAA 100 43
  IR04_01360 NONE
  IR04_01370 NONE
         rho NONE
  IR04_01375 NONE
  IR04_06430 NONE
  IR04_01380 NONE
  IR04_01385 NONE
  IR04_01390 NONE
  IR04_06435 NONE
  IR04_06440 NONE
         fre NONE
  IR04_01405 NONE
  IR04_01410 NONE
  IR04_01415 NONE
  IR04_06450 NONE
  IR04_06455  324558 ..  324575 +  -2.6  -2.61582   TCGAGTCCACTCAGA             CCCACC ACTAAC GATGGG              GTTATAGCTCAGCTG  41 19
  IR04_06460  324646 ..  324684 +  -9.8  -4.25283   TCCCGCATAACTCCA   CCATCTTTAAGCGTTTTC GCT GAGAATGTTTAAAAATGG   TTTTCATCAGAAAAT  93 23
  IR04_01435 NONE
  IR04_06465  327827 ..  327837 +  -2.4  -4.46926   GGCTTAACCATACAA                 CACC CAA GGGG                 TTTTGTAGTGGACTC  60 8
  IR04_06470  328089 ..  328099 +  -2.4  -2.76189   TTTGGTCTAACCAGA                 CAGC GGA GCGG                 TAGTTCAGTCGGTTA  41 47
  IR04_06475  328182 ..  328199 + -11.3  -5.42514   CCACTTATTACGAAA             CCCAGTC TTAG GACTGGG              TTTTTTGCTTTCTGG 100 38
  IR04_01450  329048 ..  329060 +  -4.1  -3.91897   CAATTGGATAATGCT                TTGGT TCA ACCGA                TTTCTGCGTCGACCG  59 162
  IR04_01455 NONE
  IR04_01460 NONE
  IR04_01465 NONE
  IR04_06490 NONE
  IR04_01475 NONE
  IR04_06495 NONE
  IR04_01480  332403 ..  332416 +  -8.1  -5.06816   TTAAAGCCAAATAAA               GAGGC GTCA GCCTC                TTTTTCTTGAGCACT  95 6
  IR04_01485 NONE
  IR04_01490 NONE
  IR04_06505 NONE
  IR04_06510 NONE
  IR04_06515 NONE
  IR04_06520 NONE
  IR04_01495 NONE
  IR04_01500 NONE
         tuf NONE
  IR04_01505 NONE
  IR04_06530 NONE
  IR04_01510 NONE
        nusG  336448 ..  336476 +  -5.4  -4.64144   TTTAGGCTTGTCTGG       GGCGTG-GATTAT GACT ATAATTTCGCGCC        TTTTTACAGGTTCTT  73 52
  IR04_06540 NONE
  IR04_01515 NONE
  IR04_06545 NONE
  IR04_01520 NONE
  IR04_06550 NONE
  IR04_01525 NONE
        rplL NONE
  IR04_01530  338909 ..  338934 + -15.5  -4.64766   AGCCGAAAGGCTAAT         GGCTGGTGGTT TAAT AACCACCGGCC          TTTTTGCGCTGTAGG 100 4
  IR04_01535 NONE
  IR04_01540 NONE
  IR04_01545 NONE
  IR04_01550 NONE
        rpoB NONE
  IR04_01565  343193 ..  343221 +  -8.8  -4.23892   CGGTTTCGGTAGGAA        GGTGCTCGTTGC CAATC GCAGCGAGTTCC        TTTTAACTCCTTACA  83 52
  IR04_01570 NONE
  IR04_01575 NONE
  IR04_01580 NONE
  IR04_01585 NONE
  IR04_01590 NONE
  IR04_06565 NONE
  IR04_01600 NONE
  IR04_01605  348160 ..  348171 +    -3  -2.68491   TATAGTCAATAATTC                TTGT GCTG ACAA                 ATTGTGGTGTGAATT  42 29
  IR04_06575  349070 ..  349086 + -10.9  -4.11884   TGTCGTTATGAGATG              CTGAGTC GAG GACTCAG              TTTATGATTATAGTT  93 84
        hemE NONE
  IR04_01635 NONE
  IR04_06585  351058 ..  351073 +  -3.2  -2.58249   AGGTGTGCGAGCTAT              GCATGC CTGA GCATGA               GTTATAACCAATCTG  42 16
  IR04_01640 NONE
  IR04_01645 NONE
  IR04_06590  352095 ..  352107 +  -9.1  -3.05343   GATTGCGGTTGTTGA                GGCGT TTT ACGCC                TCTTAGCGCTGTAAC  68 7
  IR04_01650  353388 ..  353405 + -11.3  -3.80573   AATGCGTATAAAAAA             GCCCTGA GTAT TCAGGGC              TTTCATCATCATCGA  95 113
  IR04_01655  354551 ..  354576 +    -4  -3.20841   CGCCACGTGCGGCCG         CCATTTCTAC TGCTGC GTAGATGTGG          TCTTCGTGTGAGTGT  49 36
  IR04_01660  355428 ..  355448 +  -3.9  -3.65199   TCCGCATCGCAGAGG            CAGCAATCG GAT CGATCTCTG            TTTGCATCACGGGTT  55 366
  IR04_01680  358474 ..  358487 +  -3.8  -3.77119   CAGAGTGCAGAGCCT               CGTC CATGTT GACG                TTATATTGCTTGATG  56 57
  IR04_01685  359157 ..  359168 +  -5.8  -2.85056   CCACAAACACGTTGG                TGCG ATCG CGCA                 GTTTCACTTCAAGAT  53 237
  IR04_01690  359856 ..  359866 +  -5.4  -3.82117   GTCGATCTGAATTTG                 GGTA TAG TACC                 TCTTTTGTGAATAAA  61 288
  IR04_06625 NONE
  IR04_01695 NONE
  IR04_06635 NONE
  IR04_06640 NONE
  IR04_06645 NONE
  IR04_06650 NONE
  IR04_06655 NONE
  IR04_01700  361414 ..  361424 +  -4.6  -2.98823   AAGAAAAGATTTATT                 GCGT TTA GCGC                 TATATATGGACGCGG  50 110
  IR04_06660 NONE
  IR04_06665 NONE
  IR04_06670 NONE
  IR04_01710  361796 ..  361821 +  -4.1  -4.10566   GATTTTTCTTTTTTA         GGGTGTTTAGCA TTT TGCTAAA-GCTC         TTTCTATAATGCTGT  61 16
  IR04_01715  362546 ..  362562 +  -2.1  -2.93708   GATGACCAATTCGCC              GAATGGC TGA GCCTTCC              ATATTTTTCAGGAAA  42 145
  IR04_01720  363351 ..  363365 +  -2.8  -4.56597   TTCACTTAAATCAAC               GTCG CAAATCC CGAC               TTTTTCAAAGCCGAG  65 454
  IR04_06680 NONE
  IR04_01735 NONE
  IR04_06685 NONE
  IR04_01740 NONE
  IR04_06690 NONE
  IR04_01755 NONE
  IR04_01760 NONE
  IR04_06695  368748 ..  368760 +  -4.8  -2.51256   TTGCGTGATGTACCC                CGGA AAGGA TCCG                CTATTGGTACTCTGT  47 52
  IR04_06700 NONE
  IR04_01775 NONE
  IR04_06705 NONE
  IR04_01780 NONE
  IR04_06710 NONE
  IR04_01785 NONE
  IR04_01790 NONE
  IR04_06715  372720 ..  372735 +  -8.2  -4.57581   ACGTTATTAATTCAA              GGCTCC GTAA GGGGCC               TTTGTTATTTGGAGT  87 51
  IR04_06720 NONE
  IR04_01795  373539 ..  373554 +  -6.2  -2.73474   TTGCCACCATCTGAA              GTAAAC GCCA GTTTAC               CTTCTCGTTGTAAAG  51 276
  IR04_01815 NONE
  IR04_06735 NONE
  IR04_01820  375161 ..  375180 +  -8.6  -4.96848   AGAGGAATAGAAGAA            GGCCTG-AC GTT GTGCAGGCC            TTTTTGTATGCGCGG 100 10
  IR04_01825 NONE
  IR04_06740 NONE
  IR04_06745 NONE
  IR04_01830 NONE
  IR04_06750 NONE
  IR04_06755 NONE
  IR04_01835  377242 ..  377266 +  -6.5  -3.39895   TAAGTAAATCAGGAG          CTAGTTAATGG CAA CTATTAACCAG          TTGGTTCGTAAGCCA  59 110
  IR04_06760  377672 ..  377682 +  -2.6  -4.08216   GGCCAAACACTAAAA                 TTAA ATT TTAA                 TTTTGAAAAAACTGA  57 74
  IR04_06765 NONE
  IR04_01845 NONE
        fusA NONE
  IR04_01860 NONE
         tuf  381719 ..  381750 + -14.6  -4.93968   CGCGCAATGCTGCAT      CGAAAAAGGGAAGC TTCG GCTTCCCTTTTTCA       TTTTTGGTTATAAGT 100 56
  IR04_06780 NONE
  IR04_01865 NONE
  IR04_06785 NONE
        rpsF NONE
  IR04_01870 NONE
  IR04_06795  383625 ..  383637 +  -3.3  -3.12702   ATATAGATCAGGAGA                TAGCC CAT GGCTC                GTTTCTTCCGTCGTC  46 35
        rpsR NONE
  IR04_01875 NONE
        rplI  384367 ..  384384 + -11.3  -5.64274   TGACGAATACGAAAA             CACCAGC TTCG GCTGGTG              TTTTTTTATGGGTAG 100 51
  IR04_01880  384892 ..  384915 +  -4.6  -3.82067   GTCGCTTTGGAAGGC          GAAGGTGGAC TGGC GTTTATCTTC           TTTGCCGTTTTTATC  59 195
  IR04_01885 NONE
  IR04_06815 NONE
  IR04_01890 NONE
  IR04_01895 NONE
         alr NONE
  IR04_01900  387857 ..  387900 +  -6.7  -3.27382   AGCCTGCTTTGTGTT GT-CCGTGCATGACCACCGC TTATC GCTGTGGCCATGCATGTCAC TCTCTTCTCTTGCAC  61 1
  IR04_01905 NONE
  IR04_01910 NONE
  IR04_01915 NONE
         pgi  390311 ..  390333 +  -5.6  -5.33331   CCAATTGATAGACAA           GGTCTTAC CTGTGCA GTAAGGCC           TTTTTCTTGTCTTTG  86 54
  IR04_06835  391704 ..  391721 + -11.3  -3.73953   GCAGAGAAAACAAAA             CCGGACA AAAG TGTCCGG              TTTAATCAAGATCAT  90 66
  IR04_01935 NONE
  IR04_01940 NONE
  IR04_01945 NONE
  IR04_06850  394097 ..  394127 + -10.6  -5.80248   CTTACTGTTTTTTGA       TAAGCCAAGTGA GATGACG TCGCTTGGCTTA       TTTTTTTCTATATTA 100 66
  IR04_01950 NONE
  IR04_06855 NONE
  IR04_01955 NONE
  IR04_06860 NONE
  IR04_01960  395229 ..  395247 +  -8.9  -4.93696   CCAATACGTTTTAAA             TGAGCCA CAAGT TGGCTCA             TTTTTACTATTTGGA 100 14
  IR04_06865 NONE
        cysJ NONE
  IR04_01980 NONE
  IR04_01985 NONE
  IR04_01990 NONE
  IR04_01995 NONE
  IR04_06875 NONE
  IR04_02000 NONE
  IR04_06880 NONE
  IR04_02005 NONE
  IR04_02010 NONE
  IR04_02015 NONE
  IR04_02020 NONE
  IR04_06885 NONE
  IR04_06890 NONE
  IR04_06895 NONE
  IR04_02025  402418 ..  402443 +  -5.5  -2.78679   CAAGTGTGCTTGGTA         TCGAATAAGAC TTCG GTCTTGTTCAA          ATTTGAGTCCGGCAA  50 23
  IR04_02030 NONE
  IR04_02035 NONE
  IR04_02040 NONE
  IR04_02045 NONE
  IR04_02050 NONE
  IR04_06900  405433 ..  405443 +  -2.4  -4.46926   GGCTTAACCATACAA                 CACC CAA GGGG                 TTTTGTAGTGGACTC  60 8
  IR04_06905 NONE
  IR04_06910 NONE
  IR04_02055  406208 ..  406226 + -10.3  -3.97368   GAGGGTAATAAAAAA             CCGCAGT GTTTA ACTGCGG             TTTGTCGATTAAACA  89 278
  IR04_02070 NONE
  IR04_02085 NONE
  IR04_02090 NONE
  IR04_02095 NONE
  IR04_02100 NONE
  IR04_06920 NONE
  IR04_02105 NONE
  IR04_06930 NONE
  IR04_02115 NONE
  IR04_02120  417051 ..  417071 +  -3.2  -3.16039   GTCCCGGCTGATAAC            CACGCGAG CGAGA CTCTTGTG            TTCCTGCAAATAATT  46 64
  IR04_02125  418315 ..  418333 +  -4.6  -3.09878   GCGGATCGCACCTTG             TGCCAA ACTTAAA TTGGCA             TCTTGAATCACTCGA  51 25
  IR04_02130  419323 ..  419348 + -10.5  -4.21676   ATCAAAAGCAAAAAA         GCCAACCTG AGAGGTTA CAGGTTGGC          TTTTAAATGCATTGT  91 292
  IR04_06955  421912 ..  421928 + -15.1  -5.42131   TAATTGACGAAAAAA              GCCGCGG ATT CCGCGGC              TTTTTTATATAGTTA 100 46
  IR04_06960 NONE
  IR04_02155 NONE
  IR04_06965 NONE
  IR04_02160 NONE
  IR04_06970 NONE
  IR04_06975 NONE
  IR04_06980 NONE
  IR04_02165 NONE
  IR04_06985 NONE
  IR04_06990 NONE
  IR04_02170 NONE
  IR04_06995  431822 ..  431834 +  -4.1    -4.128   GGTGATTCCTCTGGT                TTGGT TGA ACCGA                TTTATCTGTAGGAGT  61 2
  IR04_07000 NONE
  IR04_07005  433585 ..  433599 +  -4.2  -2.53015   GCGTATAATGCACGC               CGTACG TTA CGTAAG               TGAGTTGAAAAATAT  45 78
  IR04_07010  434160 ..  434174 +  -4.2  -3.05844   GCGTGACCGTAACCT               TGCAGT AAT GCTGCG               TATTCACATGAAAGA  47 18
  IR04_07015  434739 ..  434759 +  -8.3  -3.80535   CAATAATTTAAATAT            GGCTCGT GCATGTA ACGAGCC            TATTTTATGAAAATT  75 35
  IR04_07020  435235 ..  435248 +  -3.1   -3.0263   GCATCAATACCGAAG               GGTAT ATCT ATGCC                TGTTAAGCCGATGAT  44 6
  IR04_07025 NONE
  IR04_02190 NONE
  IR04_07030 NONE
  IR04_07035 NONE
  IR04_02200 NONE
  IR04_07040  440812 ..  440850 +  -9.6  -3.79021   TTCAGTCCATGTTTA   TGGATCAACGCCTTGCTG TGA TGGCAAGGCATTGGTACA   TTTAGTGCAATTTTC  81 106
  IR04_07045  441954 ..  441971 +  -5.5  -3.74747   ATAAACCGTAGTGTT             GTGCCTT ATGC ATGGCAC              TTTGCTCAGAGTTAG  61 37
  IR04_07050 NONE
  IR04_07055 NONE
  IR04_07060 NONE
  IR04_02210 NONE
  IR04_02215 NONE
  IR04_07065  445448 ..  445462 +    -7  -2.89793   TGATTTCGACAGTAA               CCCGCC TCG GGCGGA               TCCTTATGTGGCTGC  57 54
  IR04_02220 NONE
  IR04_07070 NONE
  IR04_02245 NONE
  IR04_07075 NONE
  IR04_02250 NONE
        tldD  451635 ..  451682 + -14.3  -3.65902   TAGTCTGACAATAGA CACTACGACACAAAACCACCGC CATTC GCGGTGGTTTTGCGTTG-AGAG TTTAAATCCCGTCAC 100 72
  IR04_02265  453287 ..  453308 +  -5.2  -3.58577   GCTTAGCTATGCGCA           GCATAAGC CGATGT GTTTATGC            ATTTTTGGTTCTTAA  59 4
  IR04_02270 NONE
  IR04_07095  454072 ..  454091 + -12.2  -5.50499   TCCTCGAGTCTAAGA            TACCAGCC ACAG GGCTGGTA             TTTTTTTGCCTGTAC 100 41
  IR04_07100  455026 ..  455044 + -10.3   -3.6003   ATCAACAATACAAAA             CGCCTTC ATCAA GAAGGCG             TTTGAAGATGCTTTG  82 51
  IR04_02280  457889 ..  457907 +  -5.9  -2.93853   ACTGCACCCGCTTTG             GTGCCGG GAAAG CCGACAC             GTTTCATTAAAGGAA  54 64
  IR04_02285  459351 ..  459369 +  -5.2  -3.61398   ACCTTTGAGCTCCGC             CGCCAGTT TAA AGCTGTCG             TTATTCCAACCGAAG  59 10
  IR04_02290  460137 ..  460173 + -13.3  -3.05596   GATGTTTCTAAGATG   TGA-GTTTAGTCACGC ACTATG GCGTGACTAAACATCA    TTAAATGAGAAAGTG 100 304
  IR04_02300 NONE
  IR04_07130  461951 ..  461971 + -14.1  -5.72616   TCAAGCATTGGAAAA            TACCGCTCT TGA AGAGCGGTA            TTTTTTTATCTCAAT 100 53
  IR04_07135 NONE
  IR04_07140  463859 ..  463884 + -14.1  -5.14563   GACGGATAAAAGAAA         CCCCTCAAGCTC GTA GAGCT-GAGGGG         TTTTTTAGTAAGAAA 100 81
  IR04_02320  465042 ..  465061 +    -5  -5.42862   TGCGGCACTTTTGTT            TGGCGA TTAGCTTT TCGCCA             TTTTTTTCAAAATAT  87 264
        rplU NONE
        rpmA  465813 ..  465830 +  -6.9  -5.72622   TGATGAATTTAAAAG             CCCTGCC GTTT GGTGGGG              TTTTTTATTTATCGA 100 52
        obgE NONE
  IR04_02330  467207 ..  467217 +    -4  -4.41348   TTGTGTCTAAATCAA                 CTTT CCT AAAG                 TTTGTTTCGGGCACA  66 21
  IR04_07165 NONE
  IR04_07170 NONE
  IR04_02335 NONE
  IR04_07175 NONE
  IR04_02340  469142 ..  469165 + -15.4  -4.46212   CAGAGAAAATACACT          CAACACCCGT ATTA ACGGGTGTTG           TTTTATGCTGGCAGC 100 79
  IR04_02345  470842 ..  470854 +  -3.4  -3.12327   CACCTCTTTTTGCAG                CATG AAGTG CATG                TCTTGAATATCACGG  46 114
  IR04_02350  472072 ..  472096 + -12.3  -2.54702   CTTGTTGCGCTTGCA          CTGGATTATCG CGT TGATAATCCAG          TAGCTTAACCTGTAT  86 286
  IR04_02360 NONE
  IR04_02365  474338 ..  474349 +  -3.6  -2.54801   TTGGCGGACTCAATT                CGGT CTAC GCCG                 CTGTATTTGCGACTG  44 299
        pntA NONE
  IR04_07210 NONE
        pntB NONE
  IR04_02380 NONE
  IR04_02385 NONE
  IR04_02390  480455 ..  480470 +  -4.6  -5.26875   CCAGATAACGACGCG              CTTCCG CATT CGGATG               TTTTTTGGTTAACGC  83 79
  IR04_02395  481850 ..  481864 +  -4.2  -3.89524   ATAGAGTTGGAAATC               TAAGCC ATC GGCTTC               TTTCTGCAATCGGGT  57 247
        trmB  483953 ..  483971 + -11.8  -5.03715   GAGAATTTTGCTTAA             GCCAACAT TTG ATGTTGGC             TTTTTTGACCCTAAT 100 44
  IR04_07285  485166 ..  485181 + -10.4  -3.64765   AAAGATAAAAATAAA              GAGGCG CACG CGCCTC               TTGGTTATTCTTCTT  82 226
  IR04_02430  488201 ..  488225 + -15.7  -4.15453   GGATCACACGGCGCA          GCGGCCCGACC ACG GGTTGGGTCGC          TTTTACGATAAATTG 100 307
  IR04_07325 NONE
  IR04_02440 NONE
  IR04_07330  492167 ..  492180 +  -3.1  -3.95621   GAAGATTGATATGGA               GTAGC GATG GTTAC                TTTGTGCGCTTTGCT  56 22
  IR04_07335  493130 ..  493147 +  -5.6  -3.42338   CCAAGATTGTCCCTT             TAGGGA CATCGC TCCCTA              TGTTTAAAGTTGGTT  59 70
  IR04_07340 NONE
  IR04_02460  494987 ..  495004 + -12.7  -3.45634   TGACAGTAAAAATGA             GGCTGCG TGAT CGCAGCC              TTGGATTTTATTAGG 100 95
  IR04_02470  496455 ..  496467 +  -6.3  -3.72576   TGTAGATCATTCATC                TCCAT ATA ATGGA                TTTCATAACCGCGAC  63 68
  IR04_02485 NONE
  IR04_02490  498965 ..  498977 +  -5.5  -4.79352   TCGCGGCCGAAGTGA                CCGTA AGC TGCGG                TTTTCTTGTAGATAG  75 114
  IR04_07385  502456 ..  502471 + -10.4  -5.45652   ATCGATGATAAAAAA              TCCCGC TGCG GCGGGA               TTTTTTATTGCCACT 100 77
  IR04_07395  505488 ..  505517 + -17.3  -3.25204   TAATTGCTAGAGGTT       TAGAGGATTGGCG GCAG CGCCAATCCTCTG        TGTGTTTCGCGATCG 100 38
        gapA NONE
  IR04_02525  506793 ..  506805 +  -3.4  -2.79302   TAAATAGTTTGAGAG                GACA AATCA TGTC                TGTAATCAAGATGAT  43 55
  IR04_07405  507974 ..  508000 + -15.2  -4.00042   GCGTAATAATCGAAT         GAGAGCGGGGGT AAG ACTCCCGCTTTC         TTGTTTGCTGCACGG 100 35
  IR04_07415 NONE
  IR04_02535 NONE
  IR04_07425  510383 ..  510400 + -11.3  -5.28778   ATACAAAATACCAAA             GCGGAGT GTTT ACTCCGC              TTTTTTGTCGGTAAT 100 53
  IR04_07435  512115 ..  512129 +  -2.8  -2.82138   CGTACTACCTCAATA               ATTGAC CGA GTCAAA               GTTGTGTAATTTTTA  42 25
  IR04_07440  512942 ..  512965 + -14.6  -3.97241   CATAATGATGAAGAG          TGGGGGCGAC GAAA GTCGCCCCTA           TTTGCTGATTTTTAT 100 56
  IR04_07450 NONE
  IR04_02565 NONE
  IR04_07455 NONE
  IR04_02570 NONE
  IR04_02575  519049 ..  519064 +  -5.4  -4.90778   GTGCTCAGGACAAGG              GCCAGCA TGA TGC-GGC              TTTTATTTAAATAGG  78 116
  IR04_02580  519831 ..  519845 +  -5.6  -5.27779   CTTTCCAAAGCAAAA               GCAGGG CCG CCATGC               TTTTTTGATATTGGC  85 326
  IR04_02595  521541 ..  521567 +  -9.5  -3.35438   GTCAGGTACAAAAAA         GGTTAGTAAGC ACTAG GCCTACTAACC         TTCTGGAATCTGGTG  74 269
        mscL  521970 ..  521980 +  -2.6  -3.63707   CGATGGGGCATGGTC                 TAAT ACT ATTA                 TTTGAAGGTTATCTT  51 17
  IR04_02605  524051 ..  524064 +  -3.9  -2.52896   GAGCGTCTAAGGTCT               TATTC TTTT GAATA                TCAATTCGGAAGTGA  44 119
  IR04_02610  525434 ..  525445 +  -2.2  -3.62611   GCCTCTAAAAGCCTT                TGGG TAAG CCTA                 TATTCTTGTATTTTA  50 190
  IR04_02620 NONE
  IR04_07490 NONE
  IR04_02625 NONE
  IR04_02630  528712 ..  528728 +  -8.1  -3.68569   TGGCTCTGCTTGAGT              TTCTTGA TTA TCAAGAA              TTGTTCAGTGAGTCC  70 16
  IR04_02635  529613 ..  529625 +  -6.3  -3.61178   GATTAAAATAAAAAA                CTTAC TCG GTAAG                TTTAGGATAAATAAA  63 65
  IR04_02645 NONE
  IR04_07510 NONE
  IR04_02650 NONE
  IR04_07520 NONE
  IR04_02655  534285 ..  534318 + -13.5  -5.15634   GTTTTATCAAAAAAA     TAGCTGTTACCTT-TA TGA TACAAGGTAACAGCTA     TTTTTTACTAAGGTG 100 22
  IR04_02665  537629 ..  537639 +  -8.2  -2.71144   TCTACGCTAGAAAGT                 GCCG CGG CGGC                 TGCTTCAGCAGCATC  63 169
  IR04_02670  540317 ..  540331 +  -5.6  -4.08767   TGTTATTAGTACAGA               CGAACG CGA CGTGCG               TTTTCGCGAGCTAGC  68 245
  IR04_07555  541805 ..  541822 +  -6.9  -5.24129   GAAATGGTATTGAAA             CGGTCGC GCTA GTGGCCG              TTTTTTCTAAACAAA  91 48
  IR04_07560  542784 ..  542812 +  -8.1  -3.17527   TGGCGATCACCTATT       GAGCCGCGCACG GTTACA CGA-CGCGGCTC        TCTTCATCATCGCTC  63 61
        folB NONE
  IR04_07575 NONE
  IR04_02700 NONE
  IR04_07580 NONE
  IR04_02705 NONE
  IR04_07585 NONE
  IR04_07590 NONE
        ispF NONE
  IR04_07600 NONE
  IR04_07605 NONE
  IR04_07610 NONE
  IR04_07615  550747 ..  550757 +  -8.2  -3.51924   AATTCGATCCAGAAC                 GCGG TTT CCGC                 TTCTCTACCTACGCA  71 514
  IR04_02745  552669 ..  552693 +  -2.8  -3.18681   GTTCCAGAAATTCGG          TTGCGCCATT GGCTA AATCGCGCCA          TTCATCGAGTTCGGC  45 35
  IR04_02750  554427 ..  554450 +  -5.8  -3.07895   CGGCGCAAATTCCTT          CTTCACGCGC AAGG GCGCGAGCGG           TCTGTTCGGCGTCAG  55 24
  IR04_07635  556580 ..  556602 + -13.5  -3.34344   TCTGACATTTCTCTA           GGTTGCCCA ATGGA TGGGCAACC           TTAATTCCACCCTGA 100 46
  IR04_07640 NONE
        cysW NONE
  IR04_07650  559519 ..  559548 + -13.7  -3.55622   GGTTGAAATTAGACC       GAGAAAGAGTGCC CAAG GGCACTCTTTCTA        TTTGGGACGATTGCA 100 56
  IR04_07655 NONE
  IR04_02790 NONE
        recA  561409 ..  561431 + -17.8  -4.66163   AATCTCGATGTTGAT           GAAGCCCTGC AAT GCAGGGCTTC           TTTTTGGCTGCCAAT 100 75
  IR04_07665  561940 ..  561954 +  -2.1   -3.5944   TTCAAGCCAGTGAGA               GTGAT GAGTA ATCGC               TTTCACCCTCTACAT  49 15
  IR04_02800 NONE
  IR04_07670 NONE
  IR04_02805 NONE
  IR04_07675  566183 ..  566194 +    -3  -4.18494   GATTACTCAAGGAGC                TAAG AATG CTTA                 TTTTGACTCGCCGTG  59 112
  IR04_07680  566398 ..  566418 +  -9.7  -5.38054   TAATTATCGAAGAAA            GGTCGGC CGTTAAC GCCGACC            TTTTTGTTTATCCCC 100 38
  IR04_07690  566634 ..  566646 +  -3.3  -2.71263   TTATAGCCGTATCGA                GGGTT CGA ATCCC                TCCTTCACCGCCATT  42 0
  IR04_07695 NONE
  IR04_07700  566889 ..  566903 +  -6.4  -5.88565   CCTCACCGCCATTTA               TTGGCC TAT GGTCAA               TTTTTTTGTTCTAGA 100 30
  IR04_07705  567038 ..  567055 +  -7.7  -2.59431   CGCCACTATTTAAAG             CTCCTGA ATGT TCGGGAG              TCGATTGTGAAAACA  60 36
  IR04_07710 NONE
  IR04_07715 NONE
  IR04_07720 NONE
  IR04_07725 NONE
  IR04_07730 NONE
        glpD NONE
  IR04_07735 NONE
  IR04_07740  571254 ..  571271 + -11.3  -5.06414   TGGTATATATTCAAA             GGGATGC TTCG GCATCCC              TTTTTATTCGCGCGA 100 101
  IR04_02830 NONE
  IR04_07745 NONE
  IR04_07750 NONE
  IR04_02840 NONE
  IR04_07755 NONE
        dcuC NONE
  IR04_07760 NONE
  IR04_07765  577850 ..  577879 + -15.2  -3.71794   TAAACGTTAAAAATA       CAAAAGCCCGAA GTTGAG TTCGGGCTTTTG        TTTGAGTGCTTAACT 100 51
  IR04_02860 NONE
  IR04_07780 NONE
  IR04_02865 NONE
  IR04_07785  582114 ..  582128 +  -7.1  -2.73605   CACAGCTAGTTAAAA               CCGCT CAAAA AGCGG               CTTAATTATTACTGT  59 6
        rimM NONE
  IR04_02870 NONE
        trmD NONE
  IR04_07800  583911 ..  583930 +   -15  -5.31877   TTCTCGTAGTAAAAA            GCGGAGCC CAAG GGCTCCGC             TTTTTTGTGCTCCAT 100 55
  IR04_02885 NONE
  IR04_02890 NONE
  IR04_07820 NONE
  IR04_07825 NONE
  IR04_02895 NONE
  IR04_07830 NONE
  IR04_02900 NONE
  IR04_02905 NONE
  IR04_07835  590589 ..  590608 +  -5.6  -4.45664   TTAACCATGAACTAT            GTGCCATC GGGA GAGGGCGC             TTTTGCTTCGATTGA  73 202
  IR04_07845 NONE
  IR04_02920 NONE
        sspA NONE
  IR04_07855 NONE
  IR04_02925 NONE
  IR04_02930  595510 ..  595529 +  -3.6  -4.25283   CGACCACCTGTGTTG            CTGTTC GAGTTCGA GAACAG             TTTTGGTGGACGGGT  63 16
  IR04_02935  596711 ..  596730 +  -5.6  -2.53876   ATAACTGAGCGCGCA            GCAGTTGC CACT GCGCCTGC             TGAGTTGGAGTCAAG  52 70
  IR04_07880 NONE
  IR04_02940 NONE
  IR04_07890 NONE
        fbpC  600310 ..  600332 +  -4.9  -4.18676   TTGATCGATTCAGAC           CATTTTGAG TTGTT CTCAAAAAG           TTGTTTAATTTCTGG  64 396
  IR04_07900  602171 ..  602188 + -11.3  -5.05601   TGGTGATGGCCGAAA             TGCCGCA GTCA TGCGGCA              TTTTTGTCTCTGATC 100 52
  IR04_07905 NONE
  IR04_07910  604243 ..  604260 +  -9.9  -5.14563   AATCGATATAGAAAA             GGTCAAC CGAG GTTGACC              TTTTTTGATCCAGAG 100 47
  IR04_02990 NONE
  IR04_07950 NONE
        glgC NONE
  IR04_07955 NONE
  IR04_07960  616708 ..  616745 + -12.1  -3.49618   GGTAACACCCTCTTG   GGCGCGGCGTTGTCGTTG CAT TGACGACAACGTC-TGCC   TTGCTTGTGTGGGCA  91 36
  IR04_03005 NONE
  IR04_03010 NONE
  IR04_07965 NONE
  IR04_07970  622113 ..  622137 + -14.4  -3.48994   GATTGAATCCTCTTT          TAAAGCCGCG CTTGT CGCGGCTTTA          TTGTGGGTATTTTTC 100 48
  IR04_07975  622660 ..  622692 + -19.3  -5.52384   GTGCGTTATTGTTGG      GAAAAGGCTGCACCG AAT CGGTGCAGCCTTTTG      TTTTTTTACTCAGCA 100 60
  IR04_07980 NONE
  IR04_07985 NONE
  IR04_03030 NONE
  IR04_07990 NONE
  IR04_03035 NONE
  IR04_07995 NONE
  IR04_08000  628337 ..  628361 +  -7.7  -2.68813   GTTACCTGCATAAAA          AAGCCCGACGT CGA GCGTCGGGCAA          GTGTTCTTCTCCGCT  60 75
  IR04_03045 NONE
  IR04_03050  631772 ..  631787 +  -4.6  -3.27653   GTCAGGTAGTAGAAA              CCGAGG AAAT CATCGG               TGTTGTAGTACAGGT  52 300
  IR04_03060  632959 ..  632970 +  -4.4  -3.33344   CCCAGCCGACCATAC                GCTT ACCC AAGC                 TCTTGAGTTTTTTCT  51 137
  IR04_03065 NONE
  IR04_03070  633814 ..  633827 +  -3.1  -3.28497   GGTAGACGATATCGC               TATGG CCAA CCGTA                TTCAGTTTGAACTCA  47 6
  IR04_03080  638681 ..  638730 +  -7.4  -2.62522   CCCTTCAGCACGACG TTTG-GCT-TGTTCACGCGTCATA TTGG TATGGCGCGTGATCACATCGCAAA ATTGCTCTTCCATGG  58 390
  IR04_03100 NONE
  IR04_03105  642117 ..  642139 +   -12   -2.7566   TGAACGCCTGAGTAC           CCGCTGCTGG ATA CCAGTAGTGG           TGGTTAGGGTTCGCT  80 171
  IR04_08080  651767 ..  651779 +  -3.3  -2.78438   CAACGACCACGTGTG                GTTGC GGC GCATC                ATTTAGCGTCTAATC  43 0
  IR04_03150 NONE
  IR04_08085 NONE
  IR04_03160 NONE
  IR04_03165 NONE
  IR04_08090  656155 ..  656180 + -17.7  -4.82901   TGAATGTTGATAAAA         GTTAGGCCAGC AATT GCTGGCCTAAC          TTTTTGTCCGCCACG 100 60
  IR04_08100  658850 ..  658875 + -14.9  -4.62336   TGAGCTAAAAATAAA         TAAAAAGCGCC AAAC GGCGCTTTTTA          TTTTTCAGGTAGCCT 100 54
  IR04_03200  661587 ..  661597 +  -6.8  -4.31412   AGCATAAAGATTTGA                 TGGC TCA GCCA                 TTTTCGTGGCTATTT  74 128
  IR04_03210 NONE
        greA  662526 ..  662541 + -10.4  -5.18357   GGAAAAAGTAAAAAA              GGTCGC AGTC GCGACC               TTTTTTCATCCATTG 100 66
        rrmJ  663660 ..  663671 +  -4.4  -3.25262   CGCTAGCTACAAACT                GTAG TACC CTAC                 CTTTTAATTACAATT  51 78
        hflB NONE
        folP NONE
  IR04_03230 NONE
        glmM NONE
  IR04_03235 NONE
  IR04_08145 NONE
  IR04_08150 NONE
  IR04_08155 NONE
  IR04_08160 NONE
        glpC NONE
        nusA NONE
  IR04_03250 NONE
  IR04_03255 NONE
  IR04_08170 NONE
  IR04_03260  673687 ..  673714 + -12.7  -4.15698   TTGTTGAATACACCA        TGGGGGGCTGG CCAAGA CCATCCCCCCA         TTCTTTCTATCAGTG 100 48
        rbfA NONE
        truB NONE
  IR04_08185 NONE
  IR04_03280  675774 ..  675793 +  -2.2  -2.66787   GTTGTCAGTCTATTT            TTACTAGT CGCG ATTAGTAG             TGCTCTGAGTATTAA  40 120
  IR04_08190  678042 ..  678060 + -11.7  -5.24531   AAAGCGTGCTATAAA             GGGAGCG TTATT CGCTCCC             TTTTTTATGCGAAAT 100 89
  IR04_08195  679029 ..  679043 + -11.4  -5.84381   CTCTCTGATAAAAAA               GCCGCA TCT TGCGGC               TTTTTTTGTTGCTAG 100 49
  IR04_08200  679502 ..  679516 +  -2.8  -5.10461   GTTATTGGGTAAAGC               CCTG CGCTAGT CAGG               TTTTTATTAGATAGG  74 16
        vmrA  680917 ..  680936 + -12.2  -3.74747   AAAGGCAAATAAAAA            GGGTTGCT GATG AGCAACCC             TTTGGTAAACCTTAG 100 47
  IR04_03320 NONE
  IR04_03325  684188 ..  684198 +  -2.4  -3.14683   CATTTTGGATGCACT                 GCTC TAA GCGC                 TTGGTAAACCCGTGT  43 4
  IR04_03330  684662 ..  684696 +  -8.6  -3.23216   GCTTTTCTGAGGTAT     CAATCGCGTGGAATAC AAG GTATTGCACCCGATCG     TTGATCATGATGGGG  67 41
  IR04_03335 NONE
  IR04_08225 NONE
  IR04_08230  686280 ..  686295 +  -6.1  -5.05601   AATCCATACTGAAAA              GGAGC CTTTCT GCTCC               TTTTTCTCTCTAGTC  85 45
  IR04_08235 NONE
  IR04_08240  687440 ..  687453 +  -6.7  -3.41051   CTAAGATTGTGTCGA               CGATC GCTT GATCG                TTATCATCAAGGTGC  63 241
  IR04_03355 NONE
  IR04_08250 NONE
  IR04_03360 NONE
  IR04_08255 NONE
  IR04_03370  692985 ..  692995 +    -4  -2.53911   GTCAAAGTGATGCTT                 TTCA GCT TGAA                 TGAGTTCGCCCTTGC  45 7
  IR04_03375 NONE
  IR04_03380  695104 ..  695152 +    -6  -4.57837   AGGATTCGGTGCACT GGCGGTGGGCAGAAAGGTGACA AATCC TTTCATCTATCTGCCTATTGCA TTTTTGCAAAAGTAT  75 373
  IR04_08275  695941 ..  695961 +  -6.1  -3.14683   CAGCGTGTTGTATAA            GCGGGAG ACAAATG CTCTCGC            TTCATCGACCAATCT  57 76
  IR04_08285  697996 ..  698007 +  -2.2  -3.39327   TAAATGGCTGCGGAG                GTGG GTTA CTAC                 TTATAAGTGTGGCAA  45 71
  IR04_08290 NONE
  IR04_08295 NONE
  IR04_03405 NONE
  IR04_03410 NONE
  IR04_08300 NONE
  IR04_08305 NONE
  IR04_03415 NONE
  IR04_08310 NONE
  IR04_08315 NONE
  IR04_08320 NONE
  IR04_03420  707201 ..  707214 +  -3.8  -3.67498   CGCGCTCTGCTTCAT               CTGG CGCTGC CCAG                TTCTCTTCGGCGTTA  55 477
  IR04_03435  708476 ..  708506 +  -3.9  -3.20382   TGAGATAGGCCACAC      CACGCGAC-AAGGC ATAG GCTTGCGTCGCGGG       TTGATAACTGTCGAG  48 142
  IR04_03440 NONE
  IR04_08340  710574 ..  710604 +  -9.8  -3.18023   AGATCTTCTGTGTAA       GTGGCTGTTTATCA TAT TGATACACGGTCAC       TATTCATAATCATAA  74 6
  IR04_03455 NONE
  IR04_03460  712102 ..  712113 +    -3  -2.93382   GGGATTGAATCGTCT                TATC GGAG GATA                 TATCTGGATCTGCCA  44 156
  IR04_03465  713263 ..  713282 +  -3.6   -2.8511   AAAAAATAGAATTAA            TACTGTTT GTTT ATACAGTA             TCTGATGCTATGCTG  45 146
  IR04_03470  713713 ..  713750 +  -5.7  -3.33708   AAGGGTTACCTAAAC   GGTTTAG-CTAAGGCTTT CTG AAAGGCTTAGTCAAAGCC   TTCATATATGGGTTC  57 137
  IR04_08370  714787 ..  714804 +  -4.1  -3.35224   AGCTTTGTAGCCCTC             TACAAGG TAAG CCTTGCA              TATTTGAAAACCTCT  51 31
  IR04_08375  715391 ..  715412 +  -4.5  -2.71731   GCGGATTAAGAGCTG           CATTGAGTG ACAC TATTCAATG            TGATTACGCGATGAC  48 248
  IR04_03485 NONE
  IR04_08380 NONE
  IR04_08385 NONE
  IR04_03490 NONE
  IR04_08390  717973 ..  717992 +  -2.9   -3.5393   TGGTTATCAGGTTTT            TATGGCT CTGGTA AGTCATA             TTTCGGAAAGATGCT  49 242
  IR04_08395 NONE
  IR04_03510 NONE
  IR04_08400 NONE
  IR04_03520 NONE
  IR04_08405  727495 ..  727509 +  -5.6  -3.09908   TAAAAAGAATAACGA               CCGCGA CCT TGGCGG               ATTATTTTAAGGCCA  55 1
  IR04_08410 NONE
  IR04_08415 NONE
  IR04_03535 NONE
  IR04_08420  731344 ..  731376 +  -6.4  -3.06815   ACTAAACAACTCTGT     TTGAACCTTC-ACAC TATC GTGTCGGAGGTTCAC      TATGTTCAAAAACCT  56 113
  IR04_03540 NONE
  IR04_08425 NONE
  IR04_03545 NONE
  IR04_08430 NONE
  IR04_08435 NONE
  IR04_08440  736587 ..  736605 + -10.3  -3.22475   TTGCAGAAGAAGATA             TGAGGCC AGTTA GGCCTCA             TCTTGTAGAGCTAAA  77 23
  IR04_08455 NONE
  IR04_08460 NONE
  IR04_03560 NONE
  IR04_08465 NONE
  IR04_03565 NONE
       groES NONE
  IR04_08470 NONE
  IR04_08475 NONE
  IR04_08480 NONE
       groEL NONE
  IR04_03580 NONE
  IR04_08485 NONE
  IR04_08490  743535 ..  743545 +  -3.2  -3.86015   TGTTAACGCAAACGC                 CGAG TAA TTCG                 TTTATAACAAACCTC  55 19
  IR04_08495  744354 ..  744377 +  -7.4  -3.06696   CTTTCTGCTTGGTTG          GAGGGGCGTT AATG AAAGCCTCTC           TGTATTCAGGGCAAC  61 14
  IR04_08500 NONE
  IR04_08505 NONE
  IR04_08510 NONE
  IR04_08515 NONE
  IR04_08520 NONE
  IR04_03615 NONE
  IR04_03620 NONE
  IR04_03625 NONE
  IR04_03635 NONE
  IR04_08525 NONE
  IR04_03640  754494 ..  754506 +  -3.4  -4.74653   TCGACGAATTTTTTG                TAGC TGACT GCTA                TTTGTTTATTCGTTT  69 332
  IR04_03665  759581 ..  759597 + -10.1  -2.77899   ACAGCAAGATGAAGA              GCCCCTT CGA GAGGGGC              TGGTTGATGGGAGCC  72 397
  IR04_08560 NONE
  IR04_08565 NONE
  IR04_03670  761377 ..  761409 +  -4.8  -2.99325   ACGCTTTAACCCAGC     CGGGAGTACTTTCCC GTCA GGGGCAG-ACTCCCA      CTTTGATTGTCGGAG  50 8
  IR04_03675 NONE
  IR04_08570  762276 ..  762312 +  -6.6  -5.42862   CATTTTACTAACCCT   GGCGGGATTATTCTCCC GTCA GGGGGAA-GGTCTCGTC    TTTTTTTGGAGATCT  93 52
  IR04_08580 NONE
  IR04_03685 NONE
  IR04_08585  764715 ..  764756 +  -4.5  -2.64099   GGTGACCATTGGGAG GATTGATGATGGAAAAGTGC TTT GCTCTTTACCGTTA-CAGTC ATTCTGATGGGACAG  48 20
  IR04_08590  765531 ..  765544 +  -5.9  -3.04792   ACTACCACCCAAATG               GGGGC CATT GCTCC                TGTTGGGAGTGGTGC  54 69
  IR04_08595  766538 ..  766572 + -11.4  -2.86177   ACTCATTTTATTTCT     AACGTCCTTGAGGGCA TGT TGCCCTTAAGGGCGCA     TGTCCTCTGAACTAT  81 24
  IR04_08600  767068 ..  767082 +  -7.1  -3.04792   CCCAGCGGGGAAACG               CTCCC GCTGA GGGAG               TATTCCCCCTAATGA  61 52
  IR04_08605  768788 ..  768831 + -17.4  -5.75342   CAATTTTACCACCCT GCGGGGACGATTCCGTCCCC GTCT GGGCATGGGTTCGTCTCCGC TTTTTTTTGGGAGAC 100 47
  IR04_08610 NONE
  IR04_08615  769728 ..  769759 +  -8.8   -4.8622   TAATGCAGGACCTAA      GCTGACTTTTATCA CTTG TGGTAGGAGTCGGC       TTTTTACTTAAGGAG 100 64
  IR04_08620  770859 ..  770872 +  -9.5  -5.52909   TCATATCTGATCCAA               GGGGC TTCG GCCCC                TTTTTTTGCGTCTTG 100 31
  IR04_08625  771964 ..  771981 +  -6.3  -3.50447   ATCGTCACACAAAGC             CTTCC-CG ATA CGCGGAAG             TTCTATGAAACTTAC  61 339
  IR04_08630  772342 ..  772377 +  -6.3  -4.57341   ACGTTCTGGAATACA    TTGGGAGCAGA-CA GCCATTCAA TGATCTGCTCCCGA    TTTTTCCGCAGCGTT  77 41
  IR04_08660  776432 ..  776448 +  -7.2  -4.13767   TTCGTTTTAAATAAA              CCGGGC TTCAT GTCCGG              TTTTGCGGTAAAAGC  73 42
  IR04_08665 NONE
  IR04_08670 NONE
  IR04_08675  782591 ..  782615 +  -9.3  -5.51165   ACTAAAAACAGAAGG          TAGCCAGCTTG TGA TGGGCTGGCTA          TTTTTTTGGCCTTTT 100 36
  IR04_03745 NONE
  IR04_03750  785663 ..  785678 +  -4.6  -3.83214   CAGGTACATCTTTAA              GCAACC GAAA GGCTGC               TTTACCTTGGTTTGG  59 35
  IR04_08715 NONE
  IR04_03760 NONE
        prfC NONE
  IR04_03765  789997 ..  790010 +  -3.1  -3.66732   AGACGAGTATTTTTG               GC-CAG CGC CTGTGC               TTGTTCAGCTACTTG  51 365
  IR04_03770 NONE
  IR04_08735  792746 ..  792765 + -11.4    -5.252   TCAATAGCAGATTAA            GCGGGAGC CTTG GCTTCCGC             TTTTTTATAGGGATC 100 47
  IR04_08740 NONE
  IR04_03785 NONE
        lysS NONE
        pbpG NONE
  IR04_08750 NONE
  IR04_03795 NONE
  IR04_08755  798076 ..  798090 +  -8.6  -3.75665   ATCTCCTGAATTTTT               TGCAGA AGT TCTGCA               TTTAATGAAATATCC  75 109
  IR04_03800 NONE
  IR04_08770 NONE
  IR04_03805 NONE
  IR04_08775 NONE
  IR04_03810 NONE
  IR04_08780 NONE
  IR04_08785 NONE
  IR04_03820 NONE
  IR04_08790 NONE
  IR04_08795 NONE
  IR04_03825  805899 ..  805917 + -14.6  -5.61596   TTTTACATAGGAAAA             GCTCCCGA AGG TCGGGAGC             TTTTTTTATACAGAT 100 0
  IR04_03830  806521 ..  806534 +  -6.7  -3.80862   AGCTGGGTTTCAAGA               CCTGT TATG ACAGG                TTTGGTAATCGGTTT  67 353
  IR04_03835  807192 ..  807205 +  -3.9   -3.2218   TATGACATTTCGGTG               TAACT GATG AGTTA                TTCGTCAATATTGCA  48 15
  IR04_03840 NONE
        nhaR NONE
  IR04_03845 NONE
  IR04_08810 NONE
  IR04_03850 NONE
  IR04_03855 NONE
  IR04_08820  811118 ..  811128 +  -5.4  -3.15427   TAGGTTTTAAGCATC                 TTCC GAT GGAA                 TTAATACGCGGTATT  53 89
  IR04_08825 NONE
  IR04_03870 NONE
        ileS NONE
  IR04_03875 NONE
  IR04_08835 NONE
  IR04_08840 NONE
  IR04_03880 NONE
        ispH NONE
  IR04_03885 NONE
  IR04_03890 NONE
  IR04_08855 NONE
  IR04_08860  821114 ..  821134 + -16.9   -4.3586   TCTGATCAAAAGTCA            CGAGAGCCC ATA GGGCTCTCG            TTTTGCTCTGGCTAA 100 13
  IR04_03915 NONE
  IR04_08875  824321 ..  824343 +  -9.2  -2.55565   CCTCATAGAAGTAGA           GCTGGGAT CAGTAAA ATCCCAGC           ATCTCTTTCAGCTCT  68 45
  IR04_03920 NONE
  IR04_03925 NONE
  IR04_03930 NONE
  IR04_08890 NONE
        tyrA NONE
  IR04_03940 NONE
  IR04_03945  830325 ..  830337 +  -4.7   -4.3739   ACCCAGCTCGATCGT                GCCTG AAT CCGGC                TTTTCTACACCACTC  67 213
  IR04_08910  833750 ..  833766 +  -2.3  -3.19157   TGAATGAGCATGAGT              TAAATAC AAA GTATTGA              TTCCTCAACTTGCTG  43 9
  IR04_08915  834139 ..  834156 +  -6.3   -5.0133   GAAGCCTAATGACAT             CACT-GGC TAA GCCGAGTG             TTTTTTGAAGAACTC  87 32
  IR04_03990 NONE
  IR04_03995 NONE
  IR04_04000 NONE
        rluD NONE
  IR04_04005 NONE
  IR04_08955 NONE
  IR04_04010 NONE
  IR04_04015 NONE
  IR04_08960 NONE
  IR04_04025 NONE
  IR04_04030 NONE
  IR04_08965 NONE
  IR04_08970  847887 ..  847925 +  -9.8  -4.25283   CTCCCCTACGGGATA   CCATCTTTAAGCGTTTTC GCT GAGAATGTTTAAAAATGG   TTTTCATCAGAAAAT  93 23
  IR04_04040 NONE
  IR04_04045 NONE
  IR04_08975  851068 ..  851078 +  -2.4  -4.46926   GGCTTAACCATACAA                 CACC CAA GGGG                 TTTTGTAGTGGACTC  61 8
  IR04_08980  851380 ..  851390 +  -2.4  -2.76189   AAACGTCTAACCAGA                 CAGC GGA GCGG                 TAGTTCAGTCGGTTA  41 97
  IR04_08985  851474 ..  851489 +    -9  -6.24157   CACTTATTACGAAAC              CCAGTC TTAG GACTGG               TTTTTTTTTCTAGAT 100 39
  IR04_08990 NONE
  IR04_08995  852717 ..  852735 + -10.3  -4.35524   TGAAGTAATAAAGAA             TCCCAGC ACTTG GCTGGGA             TTTTCGATTTACGCG 100 33
  IR04_04055  854507 ..  854539 +  -7.8  -3.06133   TCTGCATAGTGAAAC      TCTCACCACCTC ATTTACGCC GAGGTGGTGAAA      TTGAGTCCACGATTA  62 522
  IR04_04065 NONE
  IR04_04070 NONE
  IR04_09015 NONE
  IR04_09020 NONE
  IR04_09025  858706 ..  858725 + -13.6  -4.74801   TGATGAAATGAAAAA            CGCCCAAC TTGA GTTGGGCG             TTTTTCATCGAATTG 100 42
  IR04_04090  860658 ..  860675 +  -4.1  -3.10597   ACTAAAGAGCACATA             CCGCG-GA TGA TCATGCGG             ATTTTGACTCCAGCG  49 263
  IR04_04095  861529 ..  861542 +  -2.3  -2.74792   AGCATAAGAATTTGA               GCATG GCTT CAGGC                ATTTCACGCTCATAC  41 208
  IR04_04100 NONE
  IR04_04110 NONE
  IR04_09040 NONE
  IR04_04115 NONE
  IR04_04120 NONE
  IR04_09045 NONE
  IR04_04125 NONE
  IR04_09050 NONE
  IR04_04130 NONE
  IR04_09055  867973 ..  868007 + -12.2  -2.94924   TTGTAAGCGGCGCTG     TCCGTCAACTTGCCGT TGA GCAGCAAATTGACGGA     GTTTGTAGGTAGAGG  86 35
  IR04_09075  871874 ..  871893 +   -10  -4.75063   TATGGACTAGTGAAA            GCGCATTG TTAG CGATGCGC             TTTTTAGCATTTTAT 100 66
  IR04_04150 NONE
  IR04_04155 NONE
  IR04_09080 NONE
  IR04_04160 NONE
  IR04_04170 NONE
  IR04_09085  875527 ..  875544 + -14.1   -5.0538   TTCTGTGCGAACCTT             GGCGGCC GAAT GGCCGCC              TTTTTTAGGGTGAGC 100 55
  IR04_09095 NONE
  IR04_04185 NONE
         tgt  878840 ..  878851 +  -3.6  -3.17392   CTGGGTTGGATTTGC                GTGG TAAG CCGC                 TTGAATTCACCCCTG  48 50
        yajC NONE
  IR04_04195 NONE
        secD NONE
  IR04_09115 NONE
  IR04_04205  882656 ..  882694 +  -8.3   -2.5664   AATACGAGCGTTGTT  GAGCTGTGCACCTGCACCA CGT TGG-GCAG-TGAACAGTTC  GTTAGTCATTGGGTC  63 338
  IR04_09125 NONE
  IR04_09130 NONE
  IR04_04215 NONE
  IR04_09135 NONE
  IR04_09140 NONE
  IR04_04220 NONE
        iscA  886698 ..  886716 +  -3.2  -2.96031   ATCACAGGACCGCTA             TCAAGATG AAT TATTTTGA             ATTATTTGGGCTGCC  45 69
  IR04_09150 NONE
  IR04_04230 NONE
        hscA NONE
  IR04_09160 NONE
  IR04_09165 NONE
  IR04_04235  889790 ..  889805 + -10.4  -5.83226   TCTTAGCAAAAAATG              CGGACC ACTT GGTCCG               TTTTTTTATTCGGTT 100 78
  IR04_04250 NONE
  IR04_09170  891201 ..  891225 +  -8.6   -5.1356   AGCAAGCATAAATAT          AAAGGCAGCT TGTAT AGCTGCCTTG          TTTTTATTAATAAGA 100 30
  IR04_09175  891846 ..  891869 + -11.1  -3.04398   TTTAAGACAGATTAA          TTAGGCTCC CAGTGT GGAGCCTAA           ATTTTGCACAAAACA  79 43
  IR04_04260 NONE
  IR04_09180  893141 ..  893160 + -12.2  -4.89063   GATGTTATAAGATAA            GCCAGAGA TGTT TCTCTGGC             TTTATTTTTGCCTAA 100 43
  IR04_09185 NONE
  IR04_09190 NONE
  IR04_09195 NONE
  IR04_09200 NONE
  IR04_09205 NONE
  IR04_04285 NONE
  IR04_09210 NONE
  IR04_04290 NONE
  IR04_09215  901372 ..  901384 +  -7.7  -2.95483   CACTTGCGCGCAGCC                CTCAG AAT CTGAG                TGATCTTTTCACTAT  62 10
  IR04_09220  901948 ..  901971 + -10.3  -3.75332   CTCACCATCCATTAA          CTGGGTGAC TAAAGT GTCACCCGG           TTTCACTTGCGCGCT  86 48
  IR04_09230  904957 ..  904972 + -10.4  -2.52896   GATGAGTGAATGTGA              GGCGAG TAGA CTCGCC               TCCGTTGAAGAATCC  73 65
        guaA NONE
  IR04_04320 NONE
        lldD NONE
  IR04_09245 NONE
  IR04_09250 NONE
  IR04_09255 NONE
  IR04_04330  911599 ..  911619 +  -8.3  -2.61264   AATTTCGACACTGGC            GGTTACGCT GTA GGCGTAATC            ATTGTGGGTACGCGG  61 450
  IR04_09270 NONE
  IR04_04345 NONE
  IR04_04350 NONE
  IR04_09280 NONE
  IR04_09285 NONE
  IR04_04355 NONE
  IR04_09290  919026 ..  919045 +  -5.6  -3.57561   TTTTAGGCTATTTGC            GCGCAGTC GTCA GCCTGTGC             TTTGAGCCATTCAAC  61 64
        fecE NONE
  IR04_09300 NONE
  IR04_04370 NONE
  IR04_09305 NONE
  IR04_04375 NONE
  IR04_09310 NONE
  IR04_04385  925799 ..  925811 +  -4.1  -3.59979   GAGCCAAAAAGCCGC                GCATT TAA GATGC                TTTCGGATAACGGAA  54 166
  IR04_04390  926716 ..  926750 +  -5.2  -4.26351   AGCGCTTTTAAACAC   TCGCGGCTATAGTTGGC AATC GCCAAC-AT--CCGCGA    TTTGTTAACTTGGTA  68 227
  IR04_09325 NONE
  IR04_04400 NONE
  IR04_09330  928574 ..  928585 +    -3  -3.06831   CTCTTAGGCGATGAC                TCAA CGAG TTGA                 TTAAATCGGAATTGA  44 44
  IR04_09335  929094 ..  929133 +  -7.2  -4.30576   CAGGCTTCCAGAAAA  CCACTGGCCACACAATATT CCA AATAACGTCTGGCC-GTGG  TTTTGCTGATCCCAA  75 126
  IR04_04410  930085 ..  930117 +  -4.2  -3.14051   AGATTGCCAAGTACC     GCCGCCAGTTCAT CTGAAGTC ATGCACTG-CGGC      TCTTGGTGCAGATGC  49 2
  IR04_04415 NONE
  IR04_04420  931458 ..  931484 +    -8  -4.32857   ATTAACGGGGCTTAT         TGATTGGGGTCT AAG AAACCCCAACCA         TTTATGTTTAGCCCA  79 190
  IR04_04435  933295 ..  933336 +  -8.9  -2.68034   AAACAGCGCAATGGT CAGTACATCATCAATCGC ATTCTCG GCGAG-GGTGATGTACTG CTCTTTAGCTTGCTG  66 253
  IR04_04440  934496 ..  934514 +    -6  -2.83409   CCGATCTGATCTAAT             TGCTGC GCAATCG GCAGCA             TGTCGTCAATTCGTA  53 203
  IR04_04445 NONE
  IR04_04450  936086 ..  936098 + -10.5  -2.64561   CAAGAAAATCATTAC                CGGCG CAC CGCCG                ATGTATTTATTAAAA  74 71
  IR04_09370  937676 ..  937689 +  -4.5  -4.40358   TTAGCGGTATGAGGG               CGGTG CTGA CACTG                TTTTATCCAATAACT  66 29
  IR04_09375 NONE
  IR04_09380 NONE
  IR04_04465 NONE
  IR04_09385 NONE
  IR04_09390 NONE
  IR04_09395 NONE
  IR04_04485 NONE
  IR04_09400  942673 ..  942701 + -11.7  -2.78706   TTGGTTTGATGGCTT        CCCCTACGCGC CCCTTTA GCTCGTAGGGG        CTTTGCACTATAATT  81 69
  IR04_09405 NONE
  IR04_04495  943785 ..  943799 +  -4.3  -3.39449   TTCGATAAAAATCCG               TTGGT CACCC ACCAA               TTCGTCTTCCTGAAA  51 53
  IR04_09415  945858 ..  945881 + -15.4  -3.40565   GACTTGCAATAAAAC          CAAAGGGCTC AGTT GAGCCCTTTG           TTGATCTTGATGGTT 100 41
        nagB NONE
  IR04_09425 NONE
  IR04_09430  949240 ..  949262 +  -9.9  -2.92496   CAACATAATACGCCA           TGCCCTGTT GATTA AGCAGGGCA           CTATTTTATATCAAT  73 63
  IR04_04530  953550 ..  953564 +  -3.6   -2.5805   AATTCCGTCATAGCG               TTTACT AGA GGTAAA               GTTCTCGAAGGTAGT  44 84
  IR04_04535  954071 ..  954085 +  -2.8  -4.75174   GTCTACAAGTTAATT               CGCT TTACCTC AGCG               TTTTTGACTTCCGTA  67 219
  IR04_04540  956410 ..  956431 + -15.9  -3.25282   GTTTAGAAAAGAAAA           CGGGACGTC CTGA GACGTCCCG            TTACTAGTGATTGGT 100 467
  IR04_09460  958015 ..  958042 +    -2  -4.08485   ACCTGTTGCATCAAT        GGCTAGATGCTGT ATT GCACC-TCTAGTC        TTTGGTTTAAATGAA  55 378
  IR04_04560 NONE
        glnQ NONE
  IR04_09480 NONE
  IR04_04575  963520 ..  963540 +  -7.7  -3.16742   AAAATAAAATACTAA            CTATATGGT GTA ATCATATAG            TTAGTAAGGATTAAG  63 7
  IR04_04580 NONE
  IR04_04585 NONE
  IR04_04590 NONE
  IR04_09485 NONE
  IR04_09490 NONE
  IR04_09495 NONE
  IR04_04610 NONE
  IR04_04615 NONE
  IR04_04620 NONE
  IR04_09505 NONE
  IR04_09510 NONE
  IR04_04625 NONE
  IR04_09515  974594 ..  974615 + -11.7  -3.65046   ATAATTTAATAATAA           TTTGCCCAT GGAA ATGGGCAAA            TTATTAAGCTAAAAG  90 58
  IR04_09520 NONE
  IR04_04635 NONE
  IR04_09525 NONE
  IR04_09530 NONE
  IR04_09535 NONE
  IR04_09540 NONE
  IR04_04660 NONE
  IR04_09545 NONE
  IR04_09550 NONE
  IR04_09555  982078 ..  982094 +  -3.7  -3.96624   ATCTTTTCGCTCGTT              GATAAAC TAA GTTCATC              TTTATAGTGAGGATA  58 2
  IR04_09560  983137 ..  983164 + -13.6  -3.48276   AAATAAAATAGATAA        GATAACAGCCAT ATTC GTGGCTGTTATC         TTATCTCAAAAAACA 100 35
  IR04_04675 NONE
  IR04_09565 NONE
  IR04_04680 NONE
  IR04_09570 NONE
  IR04_09575 NONE
  IR04_09580 NONE
  IR04_09585  987588 ..  987620 +  -5.8   -4.7254   GGCTGGTTTAAGTGA     TTTTA-GGGAGAGTA CATG TACTCTCCTATGAAA      TTTTTCGTAGGAACT  78 26
  IR04_09590 NONE
  IR04_09595  989333 ..  989349 +  -3.6  -4.73633   TTAGCTTCAATCTCA              GAGCTC CATTC GTGCTC              TTTTCTATATTGTTG  69 365
  IR04_09605  994389 ..  994411 + -17.8    -3.068   CATTAGTACAGTTAT           TCCCCCTAGC TTA GCTAGGGGGA           TCTAGTTTGCTTCCT 100 35
  IR04_09625 NONE
  IR04_09630  999607 ..  999630 + -12.6  -5.14563   TCAACACCAAAAAAA          GAAAAGGCTT GTGA AAGCCTTTTC           TTTTTTAATCAGCAA 100 57
  IR04_04745 NONE
  IR04_09650 1003624 .. 1003643 + -13.6   -5.5208   TGAGCGACAGAAGAA            GCGAAGCC GATT GGCTTCGC             TTTTTTATGTTCTAA 100 52
  IR04_04750 NONE
  IR04_09655 1005779 .. 1005800 + -10.1  -3.81929   AGTAATTGAGTGATA           CCGCACGAA ATCA TGCGTGCGG            TTTGCTGAGTTCTTA  84 36
  IR04_04755 NONE
  IR04_09660 1007138 .. 1007163 + -14.9  -3.90744   CAATGAGTCACTATC         GAAAAGACCAG CTTG CTGGTCTTTTC          TTATTTCCAGCACCC 100 49
  IR04_09670 NONE
  IR04_09675 NONE
  IR04_04765 NONE
  IR04_04770 NONE
  IR04_09680 NONE
  IR04_09685 NONE
  IR04_04775 NONE
  IR04_09690 NONE
  IR04_09695 NONE
  IR04_04780 NONE
  IR04_09710 1015312 .. 1015322 +  -5.4  -3.92324   TGCGTGGCTCCCCAG                 CTCT TTC AGAG                 TTTCGTGTTAACAAG  63 47
  IR04_09720 1019804 .. 1019820 + -13.7  -3.65812   ACTAACAGCGCCGTG              GCCCCCT TTT AGGGGGC              TTATATTAAAACCGC 100 36
  IR04_09750 NONE
        rpmJ 1024460 .. 1024497 +  -8.7  -5.79595   AGCAAGATTTTTATC   TAACCAGATGGTTAT TCATGCTC ATGATCATCTGGTTA    TTTTTTATTTTCAGG 100 42
  IR04_09760 1026253 .. 1026271 + -11.7  -5.03314   TCTGCATACGAAAAA             GCCTGCG CATAT CGCAGGC             TTTTTTACACATCAG 100 48
  IR04_09775 NONE
  IR04_04855 NONE
  IR04_04860 NONE
  IR04_09790 NONE
  IR04_04865 NONE
  IR04_09795 1030893 .. 1030909 + -10.9  -4.85822   CAGCCCAATAAAAAA              GCCTTCA TCA TGAAGGC              TTTTCTCTTTCTGAT 100 54
  IR04_04875 1034270 .. 1034280 +  -2.6  -3.66784   TTCTGACAATTTCGT                 TAAA GAA TTTA                 TTCTGTTGCCGATAA  50 199
  IR04_09815 NONE
        motB 1036238 .. 1036257 +   -10  -5.28826   CTGTAAACTAAAAAA            GGCAAGCC ATTG GGCTTGTC             TTTTTTATGGGCTTT 100 186
  IR04_09825 1037883 .. 1037907 + -12.9  -5.59564   ATGAATGGATAAAAC          GCAGAGTTTGC TCA GCAGGCTCTGC          TTTTTTTCGCTTTAT 100 76
  IR04_09835 NONE
  IR04_09840 1040024 .. 1040040 +  -7.9  -2.85354   CCGCTTTCGGGCCAA              TACCGGC CAC GCCGGGA              ATTTGGCTTGAGCTG  61 268
        potD 1044244 .. 1044256 +  -4.1   -5.1502   ATCGGCAATACCAAT                TCGAA CTA TTCGG                TTTATTTTTCTTTCT  77 167
  IR04_04930 NONE
  IR04_04925 NONE
  IR04_09860 1043908 .. 1043918 -    -4  -3.79113   ATTTGTCGATAATAA                 CAAA TAT TTTG                 CTGGCGTCACTCAGT  57 63
  IR04_09855 NONE
  IR04_04915 NONE
  IR04_09850 1040656 .. 1040686 -  -5.5  -2.74371   AATCCGTCAAGATTA      CTACCCAAGCGACG AGTT CAT-GCTTGAGCAG       ACATTGGCTTTAGGT  50 41
  IR04_04910 1040026 .. 1040038 - -10.5  -3.01712   GCTTTCGGGCCAATA                CCGGC CAC GCCGG                GAATTTGGCTTGAGC  76 28
  IR04_04905 NONE
  IR04_04900 NONE
  IR04_04895 NONE
  IR04_04890 NONE
  IR04_04885 NONE
  IR04_04880 1034148 .. 1034161 -  -2.4  -4.04174   CGCCAGATAACGAAA               TGGA AAAAAG TCCA                CAAAGTCATAATTCG  53 112
  IR04_09810 NONE
  IR04_09805 NONE
  IR04_09800 1030893 .. 1030909 - -10.9  -5.46657   CAGCCCAATAAAAAA              GCCTTCA TCA TGAAGGC              TTTTCTCTTTCTGAT 100 78
  IR04_09785 NONE
  IR04_09780 1028268 .. 1028286 -  -8.1  -3.84246   GTCGCAACTATTAAA             GCGCAAC ATGAA GCTGCGC             GTACTATTTTGCAAA  70 125
  IR04_04845 NONE
  IR04_09770 NONE
  IR04_04840 NONE
  IR04_09765 NONE
  IR04_04835 NONE
  IR04_04830 NONE
  IR04_04825 NONE
  IR04_09745 NONE
  IR04_04820 NONE
  IR04_09740 NONE
  IR04_04815 NONE
  IR04_09735 NONE
  IR04_09730 NONE
  IR04_09725 NONE
  IR04_04810 NONE
  IR04_04805 1018823 .. 1018851 -  -3.8  -3.39618   TCGAAGTGCAAAAAT       CGCCATCGCTGTT CTTT AGC-GAGATGGCG        GGCTCAAGAATGCCG  49 26
  IR04_04800 1017664 .. 1017674 -  -5.4  -3.96892   AATGGCGAGCAGAAA                 GAAG TGA CTTC                 GCCGCTGTCACTCAT  63 6
  IR04_04795 NONE
  IR04_04790 1015595 .. 1015607 -  -6.9  -3.16564   CCTGCATGGCATCAA                GCGCC TTG AGCGC                GGTACGGCTTATTAT  59 34
  IR04_04785 NONE
  IR04_09705 1013240 .. 1013261 -  -7.3  -4.99035   TGACTGACATAAAAA           CCCTGAC TACTTAAC GTCAGGG            AACCTAATAAATCGC  89 149
  IR04_09665 1007143 .. 1007158 -    -9  -4.21462   AGTCACTATCGAAAA              GACCAG CTTG CTGGTC               TTTTCTTATTTCCAG  83 31
        ppnK NONE
  IR04_04740 NONE
  IR04_09640 NONE
  IR04_09635 NONE
  IR04_09620 NONE
  IR04_04735  997699 ..  997714 -  -6.8  -5.60689   TTATATAAGAAAAAA              GACGCC CGGA GACGTC               TTTAAACTATGATTT 100 10
  IR04_04730 NONE
  IR04_09615 NONE
  IR04_09610 NONE
  IR04_04725  995412 ..  995422 -  -2.4  -3.52321   CATTCAATTAAAAAT                 CGCG TCA CGTG                 CTGGATATTGTACAT  47 19
  IR04_04720  994678 ..  994695 - -12.7  -6.34616   TTAAAACAAAAAAAA             GGCGCAC CGCA GTGCGCC              AAAAAGTGCTTAATC 100 341
  IR04_04715  992584 ..  992606 -  -6.4  -3.52113   ATCTTGGTACAAATA           TTCATGCT TTATATC AGCATGAA           CGTTATTTCCGAACT  61 181
  IR04_04710  991912 ..  991926 -  -2.8  -3.16564   GTGGTAGTGTATTAA               TGATGG AGA CTATCA               TTAATACAAATAACA  45 181
  IR04_04705  990227 ..  990255 -  -3.2   -4.3467   AGTTCGACAGGAAAA        TCTCCAAATTTT AATGA AAAATATGGCGA        CAATACATGGAGATA  63 237
  IR04_09600 NONE
  IR04_04700 NONE
        potE  985845 ..  985871 -  -5.2  -3.40371   CATTGCATCAATTAA         CCGATGCAAT GGTAAAT ATTTCATCGG         GCAGTGCTGATCTTA  55 89
  IR04_04685 NONE
  IR04_04670  981949 ..  981965 -    -3  -4.75174   GATGTAATGCAAAAA              TTAGCT ATTGA AGCCAA              TATAAATCTACATAA  68 332
  IR04_04665 NONE
  IR04_04655  977817 ..  977828 -  -2.2  -4.44915   CAAGCAGTTACAAAA                CCAA TGAT CTGG                 CTAGTAATAGAGTAA  61 63
  IR04_04650 NONE
  IR04_04645 NONE
  IR04_04640  975944 ..  975954 -    -4  -5.96521   ATTAATGAAAAAAAA                 CTAT TAC ATAG                 GTGCATGCATCGCGC 100 4
  IR04_04630  973968 ..  973980 -  -4.9   -2.8092   CAAGAGGGTATGACA                TTACT CGA AGTAA                TCATTGTTCTGGGTA  49 46
  IR04_09500  969946 ..  969968 - -14.2  -5.60993   TGTGCGAGAAAAAAA           GCCAGTCAGC TCA ACTGACTGGC           ACTAGCCTAATTTAT 100 37
  IR04_04600  967433 ..  967450 -  -2.1  -5.03314   TCCATTTGTAAAAAA             TAC-TGAT GCC ATCATGTA             TGATATGCTAGGTAA  73 68
  IR04_04595 NONE
  IR04_04565  960613 ..  960634 -  -5.9  -2.80715   TGAAAAAAATAAAGG           TGTAACAGA TACT TCGGTTACA            ATAGAATGGGATAAG  53 59
  IR04_09475 NONE
  IR04_04555 NONE
  IR04_09465 NONE
  IR04_04550 NONE
  IR04_04545 NONE
  IR04_09455 NONE
  IR04_09450  954221 ..  954231 -  -2.6  -3.25942   AGCTTGTTATAGCAA                 TTTA ATC TAAA                 TAAATAGAGCTGATA  46 50
  IR04_09445 NONE
  IR04_09440 NONE
  IR04_04525 NONE
  IR04_09435 NONE
  IR04_04520 NONE
  IR04_04515 NONE
  IR04_04505 NONE
  IR04_09420  945857 ..  945882 - -11.9  -4.65078   AGACTTGCAATAAAA         CCAAAGGGCTC AGTT GAGCCCTTTGT          TGATCTTGATGGTTC 100 53
  IR04_09410  943530 ..  943548 - -14.6  -5.10154   ACCTAAAACCAAAAA             GCGTCGGA CTG TCCGACGC             TTTTTTCATCTCTAG 100 133
  IR04_04490  942242 ..  942260 -  -2.4  -2.53082   AAAAATGTCAGGAAT             CAAAAGCT TAG AACTGTTG             TTGCAATCCATGTCG  39 128
  IR04_04480  940227 ..  940241 -  -2.1  -2.57244   TGACGGATCAAGGTA              TCGCGG TAAA CC-CGA               ATCGTCCCGAACTGA  40 10
  IR04_04475 NONE
  IR04_04470  939077 ..  939091 -  -6.4  -4.07885   GATCTTGGCTTAAAA               GATGGC ATG ACCATC               TCTTTCCACCATGCG  69 274
  IR04_04460 NONE
  IR04_04455 NONE
  IR04_09365 NONE
  IR04_09360 NONE
  IR04_09355 NONE
  IR04_04430 NONE
  IR04_09350 NONE
  IR04_04425 NONE
  IR04_09345 NONE
        dpiA NONE
  IR04_04405  928426 ..  928439 -  -3.1   -4.3467   ATGGTTAGAGGAAAA               TC-GCG GCG CGCTGA               GTGTACTGATCCATC  62 31
  IR04_09320  925759 ..  925789 - -12.7  -2.88544   GCGGATTGTGAGAGA      TGACTCTGCCATGC TCCT GCA-GGCAGAGCCA       AAAAGCCGCGCATTT  89 39
  IR04_09315  923821 ..  923840 - -12.2  -4.87389   GAGTTGAAAAATAAA            GGGTTAGC GAAT GCTAACCC             TTTGACTTATTTATG 100 60
  IR04_04380  921942 ..  921962 -  -6.2  -3.14132   TTTGCGGCTGAGCAA           CGCAATACG CTGC CGT-TTGCG            GATCAGGAAGATTTC  57 525
  IR04_04365  919362 ..  919384 -  -4.8  -3.22894   CAGAATATTCACCAA           TTGCCGACCA AGG TGGTAGCCAA           GCAGCTAGGATTACT  51 166
  IR04_04360  917842 ..  917855 -  -2.3  -3.55622   GCTAATCGGTTCAAA               CGATG AAAT CAGCG                CAGGGATCATGGTCG  47 317
  IR04_09275  914290 ..  914300 -  -4.6  -2.62244   CCGCTCAATAAAATT                 GCCG AGC CAGC                 GGATATTGCTCAAGC  46 137
  IR04_09265 NONE
  IR04_04335 NONE
        entE  910523 ..  910566 - -12.6  -2.75064   TGCGTGATTGAACGA GTTCCCTTCCTGCTTAACAC ACGG ATTCTAAGTAGGAAGGGAAC CGCTTATTCAAGGAT  89 74
  IR04_04315  903978 ..  903988 -  -4.6  -3.86909   AGTGCAAGAAAAAAT                 GCAC AAA GCGC                 GTGTTGAAAAAATTC  59 176
  IR04_04310  903247 ..  903263 -    -3  -3.88971   GAGAGAAGAAGACAA             CG-CTGA TTCC TCAGACG              TGGGTATGGAAATTA  53 4
  IR04_04305 NONE
  IR04_09225 NONE
  IR04_04300  901534 ..  901574 -  -3.5   -4.2558   GATCGCTGATCAAAA CCTTTTGAGCAGAAGATCC GGTTA GGATC--CTGCTTAAAAGA GTATCAGTTATTGGT  63 14
  IR04_04295  900458 ..  900475 - -11.3  -4.04764   AAAATAATTTATAAA             GCCCAAG TTTA CTTGGGC              TTTTTTGTCTCTGAA 100 362
  IR04_04280  895773 ..  895787 -  -2.8  -3.33744   GGCGTGGTGAAAAAT               GTAATC AGC GCTTAC               GGTTACAGCGAAGTT  47 177
  IR04_04275  894033 ..  894046 -  -3.7  -3.09878   GCCAGCCAGTGAAGA               GGCAC CGAT GAGCC                AAGAGTCTCTTTCTG  48 18
  IR04_04265  892160 ..  892173 -  -2.3  -3.48182   AATGAATAACATCAA               CAAGC AGCT GCGTG                AAAAGCTCAAAGCCA  47 324
  IR04_04255  891007 ..  891022 -  -7.5   -3.3062   GTCAAACATCAGTAA              CGGCG ATTACA CGCCG               GGAGCCAGCACCGCA  62 200
  IR04_04240  889388 ..  889405 -  -9.9  -3.14564   CGAGTGGCGGATGAA             GATCTCG TTGT CGAGATC              CCGAAATACACGCTA  70 360
  IR04_04225  886233 ..  886244 -  -7.2  -2.85346   AAGATGCCATCAAAG                CCGC TGTT GCGG                 ACTACAAGAAAAAGC  57 247
  IR04_04210 NONE
  IR04_09120  882211 ..  882231 - -16.9  -6.19302   ATAGAACAAAAAAAA            GCCCTGCCA TAA TGGCAGGGC            GATATCAGCTGTGAC 100 51
  IR04_04200  879709 ..  879720 -  -4.4  -4.65895   GCCGCGATGGAAAAA                TTGG TCAG CCAA                 CAAGAAGAAGCTTTC  68 403
  IR04_04190  877799 ..  877809 -  -4.6  -4.14243   TACGGCACGGTAAAA                 GGGA TGA CCCC                 TGAAGAAGTGAAAGA  64 483
  IR04_04180  876605 ..  876616 -  -5.8  -3.53091   ATGTTTGGGCGCAAA                GCCA GCGG TGGC                 AAATTAGAAGTGTTG  59 227
  IR04_09090 NONE
  IR04_04175  875170 ..  875182 -  -4.1  -4.19577   CAACTGGGAAAAGAA                TCTCG ATG CGAAA                ACCATCGCCCATTTC  62 409
  IR04_04165  874226 ..  874241 -  -5.4  -4.94902   GAAGCACTAGAAAAA              GATTGG GCAA CCAACC               CACGCTGGAAAAATG  78 39
        malE NONE
  IR04_09070  870075 ..  870091 -    -5  -2.72661   TATTATTTCCAACCA              CCCGTG TTGAG CGCGGG              GTTAAGAGTCTTATT  48 36
  IR04_09065 NONE
        malF NONE
  IR04_09060 NONE
        malG  867567 ..  867585 -    -6  -3.14564   CGATTCTGCGACTAA             GATGGC TTATATC GCCATC             GAACGTCCACCGGCC  55 37
  IR04_04105 NONE
  IR04_09035 NONE
  IR04_09030 NONE
  IR04_04085 NONE
  IR04_04080  857424 ..  857436 -  -4.7  -2.54325   CGCGGTTAAATATAC                CCCGC CGG GCGCG                CAAATTGATGTGCGT  47 18
        rumB  856054 ..  856065 -  -7.2  -4.07568   GTTGCCCGTTTAAAA                GCGG TGAT CCGC                 CGTGTCACTCCGACG  71 148
  IR04_09010  854507 ..  854539 - -10.7  -2.82327   TCTGCATAGTGAAAC      TCTCACCACCTCA TTTACGC CGAGGTGGTGAAA      TTGAGTCCACGATTA  77 38
  IR04_09005 NONE
  IR04_09000  852717 ..  852735 - -10.3  -4.27694   TGAAGTAATAAAGAA             TCCCAGC ACTTG GCTGGGA             TTTTCGATTTACGCG 100 34
  IR04_04050  850262 ..  850275 -  -6.7  -3.19522   GCACTGAACATTGAA               CCTAC ATGT GTAGG                ATAGGTGGGAGGCTA  57 352
  IR04_04035  846400 ..  846412 -  -3.3  -3.92324   CCTCGTAAGAGCAAA                GCAGG GGA CCTTC                GGGCCTTGCGCTACC  55 239
  IR04_04020  844334 ..  844346 -  -7.7  -3.61654   CAGATTGACTCCAAA                CCAGA AGC TCTGG                ATAAGCTTGAGCGCA  70 156
  IR04_08945  840349 ..  840394 - -15.1  -4.54404   CAAATCAATAACAAA TCA-AAACAAAAAGAGCCACAA TTG CTGTGGCTCTTTTTGTTGGTGA GTTCTAGCGCCTTAT 100 37
  IR04_08940  839644 ..  839661 - -11.3  -5.63103   CGTCAAGCAAAAAAA             TAGCGCC CTAA GGCGCTA              TCTCCCATCATTCTA 100 42
        pheA NONE
  IR04_03985 NONE
  IR04_03980 NONE
  IR04_03975 NONE
  IR04_08930 NONE
  IR04_03970 NONE
  IR04_08925 NONE
        yjjX NONE
  IR04_03965  833763 ..  833774 -    -3  -3.15228   GTTAAATACAAAGTA                TTGA TTCC TCAA                 CTTGCTGCACTACAA  46 56
  IR04_03960 NONE
  IR04_03955 NONE
  IR04_03950 NONE
  IR04_08905  829743 ..  829767 - -15.1  -4.25104   TTCTGTGGAGCAAAA          GAAAAGGCCGC ATG GCGACCTTTTC          TGAGTGTGATACCCG 100 49
  IR04_08900  829156 ..  829194 - -10.5  -3.91488   AACTTGCTCAAACAA  GCGAATGATGCGATCCAC AGAG GTTAAT-GCATCATTCGC   CTCTCACCGTCACTC  89 80
  IR04_08885 NONE
  IR04_08880  824321 ..  824343 -  -9.9  -2.99449   CCTCATAGAAGTAGA           GCTGGGATC AGTAA AATCCCAGC           ATCTCTTTCAGCTCT  73 10
  IR04_08870 NONE
        murQ  821114 ..  821134 - -16.9  -2.77781   TCTGATCAAAAGTCA            CGAGAGCCC ATA GGGCTCTCG            TTTTGCTCTGGCTAA 100 41
  IR04_03910 NONE
  IR04_03905 NONE
  IR04_03900  819122 ..  819138 -  -6.5  -2.56761   TAAAAGCTTAATGGA              GCTCGGC TCA GCCAAAC              TGGGTGATTATGAAC  53 78
  IR04_03895 NONE
  IR04_08850  817177 ..  817197 - -15.5    -5.626   TATCGCACAAAAAAA            TGGCTCCCA GAT TGGGAGCCA            TTTTCGTTTTCAATC 100 61
  IR04_03865 NONE
         tdh  811998 ..  812018 -  -2.5  -3.76224   TTTTGAGGCACTAAA            GCAACAAAT TGA ATTGGATGC            TGAAGCAGCAAGGGT  52 36
  IR04_08815  808933 ..  808946 -  -9.5  -5.68039   AAAGGTATAAAAAAA               CCGGC GTAG GCCGG                TTTTTTGTTGCTGAA 100 53
  IR04_03815  801570 ..  801585 -  -4.6  -3.57144   TGGCGCATGCTCAAA              CGCAAG GTCA CTGGCG               TTTATCCAAAAAGCA  55 511
  IR04_08765  799094 ..  799104 -    -4  -2.98866   TTAGAGCCAAAGAAC                 GAAT GAT ATTC                 CCTTGTATTGGAAGT  47 202
  IR04_08760  797569 ..  797598 -  -3.5  -3.76952   TTGATTCAACCCAAA       CTGCACTC-CGAGA TTT TCCCGTGTGCGCAA       TGGGCAATGATTTGA  56 457
  IR04_03780  793661 ..  793708 -  -6.3  -3.07043   GTCAGCACGTTAACA CCACCGAATCGG-CTGTACGTA TCACT CACGTACCGACCAATACGGTCG TGCAGTGTCAAAACG  57 63
  IR04_03775  791193 ..  791203 -  -5.4  -3.37655   CTGGTGAAAAAATGA                 GCTT ATA AAGC                 AGGTTGTAATTCTGT  55 318
  IR04_08730  790320 ..  790339 -  -4.2  -2.74799   CACAAGCGTTGAAAG            GCTCTGTC TTAA AACAGGGC             GCACATTATAGATGG  46 66
  IR04_08725  788956 ..  788975 - -12.2  -5.72053   TAACCAAATAAAAAA            GCCGATGA AAAT TCATCGGC             TTTTTCGTAACTGGA 100 71
  IR04_08710 NONE
  IR04_03755 NONE
  IR04_08705  785031 ..  785074 -  -4.5  -2.73159   CGAAGGGCTTCAAAT GCGATGGATAGCAATTGCG GTGATA CGCTTTTGCCATACATGGC CCAAGCGGCTCCCCA  48 63
  IR04_08700 NONE
  IR04_08695 NONE
  IR04_08690 NONE
  IR04_08685 NONE
  IR04_08680 NONE
  IR04_03740  781905 ..  781917 -  -4.1  -2.72344   CTTCAGTGGCAAGCA                TACTG ATG CAGCA                CTGCATACCTTGAAT  45 299
  IR04_03730  781198 ..  781211 -  -2.3  -3.42078   CAGAGTTCAGCACAA               GACGT TATC ACGGC                ATCAAACCGCTTTAG  47 21
  IR04_03725 NONE
  IR04_03720 NONE
  IR04_03715  778517 ..  778528 -  -4.4  -3.73068   GCCTTAATCCAACAA                TCAC TAAC GTGA                 CCCTTACCGGGTTAT  55 29
  IR04_03710 NONE
  IR04_03705  776148 ..  776160 -  -3.4  -2.72344   TGTCAGGTGTAAGCA                TCCA GTGGA TGGA                TATGTTTGCCGCCAT  42 68
  IR04_03700  775264 ..  775278 -  -3.6  -3.69605   TTTACTGAAAATCAA               TAACTT AAG AAGCTA               GTTAAGGACTTAATT  53 5
  IR04_08655 NONE
  IR04_08650 NONE
  IR04_08645 NONE
  IR04_08640 NONE
  IR04_08635 NONE
  IR04_03695  765013 ..  765044 -  -2.3  -3.61398   CGCGTGCGCCAATAA      CGTCAGTTGGGAGT TTCGT ACTCGCAAG-GACG      TCAATGGCCAAATAT  49 147
  IR04_03690  763612 ..  763653 -  -5.1   -3.9712   CGAGTGCATCAGAAA GCAGTTTCACTCGTAGCCA ATGC TGGGTACGAATGATAGAGC  GAGCTGAACTCTTAC  64 427
  IR04_03680  761455 ..  761468 -  -3.8  -3.22448   CCAAAGCTAATCCAA               CGCT TTGCTG AGCG                CTTTAGTGTCGATCC  48 525
  IR04_08555  759581 ..  759597 -  -9.4  -3.26933   ACAGCAAGATGAAGA              GCCCCT TCGAG AGGGGC              TGGTTGATGGGAGCC  74 48
  IR04_08550 NONE
  IR04_08545 NONE
  IR04_03660 NONE
  IR04_08540 NONE
  IR04_03655 NONE
  IR04_03650 NONE
  IR04_08535 NONE
  IR04_03645 NONE
  IR04_08530  753077 ..  753093 -  -5.1  -3.85698   GCCTGTGTTGAGAAA              CGGCAAT CAT ATTGCTG              CTTTACTTCGCCGCT  61 465
  IR04_03630  751345 ..  751369 -  -2.7  -2.73124   CTTTAGCTCTGAAAC          GCTCAGCTTTG TTC CACAGCACAGC          AGTACTATGCAAACT  41 101
        phhA NONE
  IR04_03605  746556 ..  746567 -  -5.8  -4.20042   ACGAATACCTGAAAA                CGGT TCAT ACCG                 TCACGGGTGTCTATT  69 29
  IR04_03600 NONE
  IR04_03595 NONE
  IR04_03590  743615 ..  743627 -  -4.8  -2.55392   AATCTATCTAACCGA                GTCC ACATA GGAC                AACTGCATAGACTGG  47 6
  IR04_03585  741727 ..  741746 -  -3.6  -2.62263   ACTTGGTTTACATTA            TTTGGTAT ATTA ATACCTAA             GGTGTTAAAATTCCT  44 466
  IR04_08450 NONE
  IR04_08445 NONE
  IR04_03555 NONE
  IR04_03550  734468 ..  734478 -  -4.6  -4.25104   GGCTTGGTAGTAAAA                 GCCG TCA CAGC                 CTGGGGGGAGCAGGT  66 105
  IR04_03530  727495 ..  727509 -  -5.6  -3.13046   TAAAAAGAATAACGA               CCGCGA CCT TGGCGG               ATTATTTTAAGGCCA  55 87
  IR04_03525  726131 ..  726145 -  -2.1  -4.10552   CGCCATCAAAGCAAA              CAG-GC ACAA GCGCTG               GGCATTGTGTTTTGG  55 485
  IR04_03515  724986 ..  724997 -  -7.2  -3.90112   TTGCTGGCAATGAAA                GCGC TGAA GCGC                 AAAACGAGAAAGAGC  70 90
  IR04_03505  720601 ..  720615 -    -5  -3.53012   GGTTTTGCGGGTAAA               GTTACC GAG AGTAAC               TATATCGAAAAGGTT  55 36
  IR04_03500 NONE
  IR04_03495  717122 ..  717136 -  -2.8  -4.67755   AGACCGATTCAAAAA               GCTTTC AAT GAAAGG               CTTCTTTGACATGAG  68 324
  IR04_03480  714607 ..  714619 -  -2.6  -3.70674   GGACTATTTAAAAGA                GCGA GGTTA CCGC                TGGCATGACGGTGTT  51 22
  IR04_03475  713415 ..  713425 -  -6.8  -3.53012   CTCGCCCTCGTCAAA                 GCCT GCA AGGC                 TTGGACAATACTGCT  61 397
  IR04_08360 NONE
  IR04_08355  712508 ..  712524 -  -3.7  -3.70811   TTATACAACCTGAAA              CATTACA ACA TGTGATG              TCTAAAGTATTTCCC  53 11
  IR04_08350 NONE
  IR04_03450 NONE
  IR04_08345 NONE
  IR04_03445  709496 ..  709519 -  -5.2  -3.78953   ATGTTCATCAGTAAA          GAGCTGCTTG GCGG CAAGGGGCTC           AGACCATTCACTCCC  61 411
  IR04_08335  707933 ..  707944 -  -2.2  -3.08867   TGAAGCGCGAATATA                GAGA AATA TCCC                 GAATGTGCAGTTAAC  43 36
  IR04_08330 NONE
  IR04_03430 NONE
  IR04_08325  706098 ..  706113 -    -4  -3.62046   GTACTGCCTGAACAA              CCCA-TG CGT CAGTGGG              TGTTGAGCTTCCCGT  55 167
  IR04_03400 NONE
  IR04_03395  697716 ..  697727 -  -7.2  -3.21194   TAGAAAGTTGAGTAA                CGGC AAGA GCCG                 AAGATTGTCAGCATT  62 203
  IR04_03390 NONE
  IR04_03385 NONE
  IR04_08270  693898 ..  693911 -  -2.3  -3.81027   TTGAATTAACCCAAA               GGTTG CCAG CATCC                GCAGACGCTCAGCGC  52 122
  IR04_08260  692424 ..  692450 -  -9.5    -3.827   AACAACTAATCTAAA         CCGAGCCAAAT GCACT ACTTGACTCGG         TCATTTGTACTAGCT  81 68
  IR04_03365  690844 ..  690868 -  -5.1  -5.16472   AAAAATCTCAAAAAA          TCCCTAATATT GAA AATATCATGGA          GGAGCTTTCAAATGA  82 84
  IR04_08245 NONE
  IR04_03345 NONE
  IR04_03340  685470 ..  685486 -  -4.4  -4.28994   TATCAGTTACCAAAA              CGACAA GTTAG TCGTCG              CAGATAAACCCGTCG  63 123
  IR04_08220  682955 ..  682967 -  -5.5  -3.73858   TCAGAGTAAAATTAA                CCCCT TAG AGGGA                TTTGCGATGGCGGCG  59 17
  IR04_08215 NONE
  IR04_08210 NONE
  IR04_03315 NONE
  IR04_03310  679029 ..  679043 - -11.4  -5.24129   CTCTCTGATAAAAAA               GCCGCA TCT TGCGGC               TTTTTTTGTTGCTAG 100 196
  IR04_03305  678780 ..  678794 -  -4.2  -4.36914   GGGCTCTCGAGAAAA               TGAGCT ATT AGCACA               GCGTCTCACTGAGGC  65 147
  IR04_03300  677813 ..  677824 -  -5.8   -2.7395   ACACATCTCTCAAAT                CGCT GACA AGCG                 CGTAGAGAAAGTGTC  53 94
  IR04_03295 NONE
  IR04_03290 NONE
        artM  675519 ..  675532 -  -9.5  -4.83615   CAGTTTGTACAAAAA               GGGGC GTAA GCCCC                TTTTTTGCAGGCTAA 100 225
  IR04_03275  674065 ..  674078 -  -4.5  -3.60296   TATGCGTATGTCAAA               CCTCG TTAC CGAAG                TGATCAATAGTGACA  57 46
  IR04_03270  673766 ..  673776 -  -3.2  -3.49475   TTTAGCCGTACACAA                 CGTG TGG CACA                 GCAATTACAAAAAGA  50 44
  IR04_03265  673687 ..  673714 - -13.4   -2.7535   TTGTTGAATACACCA        TGGGGGGCTGGC CAAG ACCATCCCCCCA         TTCTTTCTATCAGTG  93 7
  IR04_03245  669550 ..  669583 -  -6.8  -3.91642   AAAAGAAGTATGAAA     TCGAGATCGATGTGC GCGTA GC-CATCGATCGCAA     AACAGGTGCGTTTGA  69 157
  IR04_03220  663800 ..  663810 -  -2.4  -3.78934   CCCCGGTGAGAATAA                 CGGC AGA GCAG                 TCGACTACACCACAT  51 91
  IR04_08120 NONE
        glpK  661860 ..  661872 -  -4.1  -3.93288   GGGGATTCAACTAAA                TTCGC CTC GCAAA                TCTTGAATTTGGATG  59 382
  IR04_03195 NONE
  IR04_08110  660386 ..  660405 - -13.6  -5.06505   AACGAGATAGAAAAA            CGCCTGCT AGTG AGCAGGCG             TTTGGCGTGTGACCT 100 52
  IR04_08105 NONE
  IR04_03180  658499 ..  658512 -  -3.9  -3.19602   CGCGTGATATCAAGA               TTTTG CTAG CAAAA                GAGATCATCGCTCGT  48 15
  IR04_03175 NONE
  IR04_08095 NONE
  IR04_03170  654292 ..  654302 -  -6.8  -2.64274   ATGCGGCGAAACGTA                 TGGC TTG GCCA                 ATCACCGCCTCTACC  53 328
  IR04_03145  651817 ..  651841 -   -10  -4.25256   TTTTCAGGAAAATAA          GGCCAGTCGA TAAAC TCGATTGGCC          GACGCTGCGTATTAG  93 212
  IR04_08070 NONE
  IR04_03140 NONE
  IR04_03135 NONE
  IR04_08065 NONE
  IR04_08060 NONE
  IR04_03130 NONE
  IR04_03125 NONE
        modA NONE
  IR04_08055 NONE
  IR04_03115  643190 ..  643208 -  -5.2  -3.73995   TTTTGTACAAAAAAC             GCGAAGTG ATT CAACTCGC             AAAACGGGTACGGTT  59 1
        modC NONE
  IR04_08050  641219 ..  641241 - -14.8  -2.91582   GAGGGGATTTAGATA           GGCGGCGCAC AGC GTGCGCCGCA           AGAAATGAACGTGTA 100 41
  IR04_08045 NONE
  IR04_03090 NONE
  IR04_08040 NONE
  IR04_03085 NONE
  IR04_08035 NONE
  IR04_08030  637022 ..  637040 - -10.3  -3.18912   GTATGGATTGAGCAA             GCTCCCT ACGAG AGGGAGC             TGCTGGTTTTATTTT  77 34
  IR04_08025 NONE
  IR04_08020 NONE
  IR04_03075 NONE
  IR04_08015  632379 ..  632394 - -10.4  -2.90496   TTTCCTTTTAAACCA              GCTGCC CTAT GGCAGC               TAAAAATTTTGCTAG  76 108
  IR04_03055 NONE
  IR04_08010  629924 ..  629944 - -16.9  -3.79747   TTAGGTATTAGCAAA            CGGGCACTC AGC GAGTGCCCG            AAAATGGATTAACCT 100 34
  IR04_08005 NONE
  IR04_03040  626617 ..  626627 -  -5.4   -3.1739   AGAGTACGCGATCAA                 CAGT TTC ACTG                 TCTCGATCAGTGCTG  53 351
  IR04_03025  622315 ..  622325 -  -5.4  -3.80014   ATATGGAGCACCAAA                 TCGT CGG ACGA                 TGGCTACAAGAAGAG  61 4
  IR04_03020 NONE
  IR04_03015  618578 ..  618603 -  -2.5  -3.83998   GCACGCTACAGCAAA         GGCAATGGCGA AGCT TCTTCATTACC          GGTTTTTGGGGATTT  52 123
  IR04_03000  612626 ..  612646 -  -6.1  -3.57792   CTAGCGAGGTTGAAA            TCTGCCCTT TGT ATGGACAGA            TGGAGTTCGCCGCGC  63 340
  IR04_07945  609375 ..  609386 -  -5.8  -3.08173   ACTAACCCTAGTCAA                CTGC GAGA GCAG                 TTAAATTTAAGGCGG  55 112
        dksA  608859 ..  608890 - -12.4  -4.53439   TCAAATGCAAAGAAA      CAAGAAAAGGGAGC TTGT GCTCCCTTTTCCTT       ACTGTTCCATCTTAG 100 37
  IR04_02985 NONE
  IR04_07935 NONE
  IR04_02980 NONE
  IR04_07930 NONE
  IR04_07925 NONE
        secD NONE
  IR04_07920 NONE
  IR04_02970 NONE
        panC  604243 ..  604260 -  -9.9  -4.62471   AATCGATATAGAAAA             GGTCAAC CGAG GTTGACC              TTTTTTGATCCAGAG 100 50
  IR04_02965 NONE
  IR04_02960 NONE
  IR04_02955 NONE
  IR04_02950 NONE
  IR04_07895  599645 ..  599664 -   -15  -3.31515   AAAGATTGCCGACAA            CGCCCACG CACT CGTGGGCG             TTGCTCTTTGGAGAG 100 43
  IR04_07885  598133 ..  598148 - -11.8  -5.79595   TCTGAAAACAAAAAA              GGGCGC GGAT GCGCCC               TTTGTGCTGCCCAAG 100 44
  IR04_07875  595217 ..  595229 -  -4.1  -2.66274   GTGCCTAGAATTAAC                GAACA CCA TGCTC                TGCCCAGCTGATTTC  45 8
  IR04_07870 NONE
  IR04_07865 NONE
  IR04_07860  593646 ..  593664 -  -5.9  -5.01811   TCATGAAATCAAAAA             GGCAGTG GTCAT CGCTGCC             TTTTTCATATCCCAC  85 52
  IR04_02915  590078 ..  590100 -  -2.7  -4.11484   TTGAAGGTTTGAAAA           GTCACGAAA ACCAA CTTCGTGAT           CCGAATTCTGACGAG  56 400
  IR04_07815  586376 ..  586386 -  -3.2  -4.07568   TGTTCGGTCGGAAAA                 TCCG GTC CGAA                 GAAAAAACGAAACTG  58 376
  IR04_07805 NONE
  IR04_02880 NONE
  IR04_02875  583057 ..  583073 -  -5.9  -4.08394   AGAGCTGGCGCAAAA              CCAGAAT CTG ATTCTGA              TTTGCGGTCGCTATG  68 264
  IR04_07775 NONE
  IR04_07770 NONE
  IR04_02855  577680 ..  577694 -  -4.2  -2.73364   TCCTGAGCTGAATGA               GTACCA GTG CGGCAC               TGCGGCGATGCACTC  45 33
  IR04_02850  575804 ..  575832 -    -3  -3.64703   GTGCTCTCACGCAAA        CGCCACACCC GAAAGCACT GGGAGCGGCA        TTAACTCACCGTTGG  51 514
  IR04_02835  571481 ..  571491 -  -3.2  -4.80453   GCAGCACAAAATAAA                 GACA AAC TGCC                 GTGGACACCCGGTTA  69 436
  IR04_02825 NONE
  IR04_02820  568709 ..  568724 -  -3.2  -3.28924   GAGCCCTGTGCACAA              CACGCA AACT TGGGTG               GATTTAGCAAAACGT  48 17
  IR04_02810  565533 ..  565551 -  -6.7  -3.54129   GAGATGGCGCGCAAA             GGCGCAA AAGTG TTGCACC             TACCGTGCGTGCAGT  63 232
  IR04_02795  560767 ..  560781 -  -2.1  -3.68265   AAATTGAAGGCGAAA              TG-GGC GATA GCCACA               TGGGTCTGCAAGCGC  50 426
  IR04_02785 NONE
  IR04_02780  558546 ..  558559 -  -2.4  -3.55761   GATTCATTTTCGAAA               TCGT GACGTA ACGA                ATGTGCATGTGCGCG  47 59
  IR04_02775 NONE
  IR04_02770 NONE
  IR04_02765 NONE
  IR04_02760 NONE
  IR04_02755 NONE
  IR04_07630  554244 ..  554286 -  -9.4  -3.79787   GGATACCAAGTCAAA CCG-G-TTT-CGACACTCAGC CTAA GCCGAGTGTCGGAAAGCTCGG TTAGGAAAATAATCC  81 26
  IR04_02740 NONE
  IR04_02735 NONE
  IR04_07625 NONE
  IR04_02730 NONE
  IR04_02725  549973 ..  549987 -  -2.1  -3.00617   CAACAAAGGGATAGA               CATTG CTGGC CAACG               TGGTCAGGCTGTCGT  42 21
  IR04_02720  546569 ..  546583 -  -2.7  -3.90286   GATGATAAATGGAAA               GGGGC AGACA GCCGC               GAGCTCCTCAAAGAT  54 265
  IR04_02710  545333 ..  545358 - -14.8  -2.56914   CATTCGAGCAAGTGA         CCAACGCCAC GATTTT GTGGCGTTGG          TTTTGAAAGAAAGAT 100 327
  IR04_02695 NONE
  IR04_02690 NONE
  IR04_07565 NONE
  IR04_02685  542420 ..  542431 -  -4.4  -3.08679   TTTTTGCATCTAACA                CGTT GAAA AACG                 AGTTGCCTGTTGTGG  49 2
  IR04_02680  541424 ..  541439 -  -3.3  -3.04144   CTTTTACTGCCAATA              CCATT GCTGCA AATGG               CGACGATGAACAGAC  45 7
  IR04_02675 NONE
        rpsU  540284 ..  540299 -  -3.3  -4.34488   CAGAGCCATAACAAA              TTCCT TAGTTT AGGAA               GCTGTTATTAGTACA  61 33
  IR04_07545  539784 ..  539816 - -16.3  -4.33258   AGGGTCAAATACAAA      CAAGCCGTGCTTTCC AAA GGATTGCACGGCTTG      CTGTAATTGGGTTGG 100 43
        dnaG  537919 ..  537935 -  -2.2  -3.81146   CTGGTGAAGGAATAA              GTATGC GCAAT GCAAAC              CACGTATACTAACAA  52 71
  IR04_07535 NONE
  IR04_07530 NONE
  IR04_02660 NONE
  IR04_07525  534285 ..  534318 - -13.5  -5.52384   GTTTTATCAAAAAAA     TAGCTGTTACCTT-TA TGA TACAAGGTAACAGCTA     TTTTTTACTAAGGTG 100 85
  IR04_07505  528287 ..  528300 -  -4.5  -4.56597   CTTTGCGGGCAAAAA               GATCG ATAA CGACC                GCTAAATACATCCAC  68 447
  IR04_07485 NONE
        folE NONE
  IR04_07480 NONE
  IR04_07475 NONE
  IR04_07470  521541 ..  521567 - -11.7  -5.28176   GTCAGGTACAAAAAA         GGTTAGTAAGC ACTAG GCCTACTAACC         TTCTGGAATCTGGTG 100 329
  IR04_02585 NONE
  IR04_07465 NONE
  IR04_07460  517965 ..  517994 - -15.1  -4.19371   TAAATGTTCAATAAA       TCAAAGGGCTACC AGAT GGTAGCCCTTTGT        TTATCCAGCGCATTG 100 44
  IR04_02560 NONE
  IR04_07445 NONE
  IR04_02555 NONE
  IR04_02550  511288 ..  511300 -  -4.7  -2.71731   GGCAGTTTTGAACGA                GCGGC TGA GCAGC                TCTTTATCTCCCAAT  48 14
  IR04_02545 NONE
  IR04_07430 NONE
  IR04_02540  509224 ..  509246 - -13.5  -3.37522   ATTCGATTGAATGAA           GAAACCCGC CAAGT GCGGGTTTC           TTTTTTTATGCAGTC 100 368
  IR04_02530  506624 ..  506640 -  -7.3  -2.89683   ACCGGATGTTAGATA              CCGCATT GGC AATGCAG              GCCACGCAGTAGCGG  59 230
  IR04_02520  505226 ..  505264 -  -3.9  -3.05769   CTGGCAAACCACAGA  TCGCCTCAATAGTTG-GG CTAA CCTCAACTATCGTGGTAA   GGAGATGCAGCCGGA  47 101
  IR04_02515 NONE
  IR04_02510 NONE
  IR04_07390 NONE
  IR04_02505  501592 ..  501613 -  -5.2  -2.52464   TCTGGCTCTAAGTCA           CTGACAGCA GAAGA TGC-GTCAG           GCAACTACATCCACT  49 16
  IR04_02500  500559 ..  500569 -  -6.8  -4.49337   CCACAACCCACAAAA                 CCCA AAC TGGG                 CTGACCGCGACCGTT  77 5
  IR04_02495 NONE
  IR04_07375  498812 ..  498833 - -10.9  -5.31456   CGAACTCATAAAAAA           GACCCTTTC ATGA GAAAGGGCC            TTGAACTCTATTGCA 100 78
  IR04_07370 NONE
  IR04_07365 NONE
  IR04_02480 NONE
  IR04_07360 NONE
  IR04_02475 NONE
  IR04_07355 NONE
  IR04_02465 NONE
  IR04_07350  494987 ..  495004 - -12.7  -3.30658   TGACAGTAAAAATGA             GGCTGCG TGAT CGCAGCC              TTGGATTTTATTAGG  95 36
  IR04_07345  494503 ..  494524 - -10.1  -4.63486   ACTCGGCCAAGAAAA           GCAGTGGGG TTAG CCCCACTGA            CTTTCAAACCAACTT 100 13
  IR04_02455 NONE
  IR04_02450  493229 ..  493245 -  -7.9  -2.65264   TGATGATTTACAGCA              GCGCGGT TTG ATCGCGC              AAAGCACACCTCTGG  60 52
  IR04_02445  491408 ..  491423 -  -7.6  -4.09739   TGAAGTGCTGCAAAA              TTTGGC GATT GCCAAA               CGCGGTTTAGTGTTG  76 96
  IR04_07320  489245 ..  489270 -  -7.5  -4.35524   CTCTCAAATCTAAAA         GGGGCACTCGT TGCA ACGAGCATCCC          AAACGTTAAGCGTTG  76 31
  IR04_07315 NONE
  IR04_02435 NONE
  IR04_07310 NONE
  IR04_07305  487482 ..  487498 - -12.3  -5.00616   CTCCTTGTGAAAAAA              CTCCCTC AAA GAGGGAG              TGTGATTATTCAATC 100 31
  IR04_07300  486987 ..  487002 -  -4.6  -4.11216   TTTGTATTGGGAAAA              GCGACG GCTG CGTCGT               GGATTCCCCTGATCT  63 50
  IR04_07295 NONE
  IR04_07290  485166 ..  485181 - -10.4   -5.0707   AAAGATAAAAATAAA              GAGGCG CACG CGCCTC               TTGGTTATTCTTCTT 100 30
  IR04_02425  484359 ..  484372 -  -2.3  -2.64803   TCAGCTTGAAATGGA               GCAGG GAAT CCCAC                GTAATCCATTTATCA  40 97
  IR04_02420  483216 ..  483234 -  -3.1  -4.21607   TGCAGGCAATAGAAA             TGAGCGA AGTCA TCACCCA             GGAATATACCGAAGA  59 80
  IR04_02415 NONE
  IR04_02410 NONE
  IR04_07275 NONE
  IR04_07270  481568 ..  481596 -  -7.6  -4.34402   CTCCTGATACGAAAA       TGACATCATAACC CAGC GGC-ATGATGTCA        TTTTTTGCAAGCAGA  79 57
  IR04_07265 NONE
  IR04_07260  480212 ..  480222 -  -2.4  -2.51849   CAACAATCTAAAATT                 CGTG GTG CCCG                 GAGGCGGAATCGAAC  39 17
  IR04_07255 NONE
  IR04_07250  479968 ..  479979 -    -3   -3.2827   TGAGCTAAGGAGGAA                CAAT TTTT ATTG                 TGTCTATGGCACAAC  47 50
  IR04_07245  479864 ..  479880 - -12.3  -5.42975   GCAGATAAAGAAAAA              CCCAGTC AAG GACTGGG              TTTCTAAAAGTGGCT 100 36
  IR04_07240  477966 ..  478001 - -12.1  -2.53382   ACGACGGGTAACCCA    TCAGTTCAGTGAAACG TTTTG CGC-TCACTGAACTGA    AAGTATGCTTAACGA  81 34
  IR04_07235  477508 ..  477519 -    -3  -3.27298   TCGTGCAAGCACCAA                CAAT CAAA ATTG                 TGGTGCCCGGAGGCG  47 26
  IR04_07230 NONE
  IR04_07225  477287 ..  477308 -  -6.7   -3.5774   AGCTAAGTCGGCAAA           TCT-ACTTGC AAG GCAAGTGAGA           AATTGGCTCCTCCTG  65 29
  IR04_07220 NONE
  IR04_07215  477091 ..  477107 - -12.3  -5.24647   ACAGATAAAACAAAA              CCCAGTC ATA GACTGGG              TTTCTAAAAGTGGCT 100 36
  IR04_07205 NONE
  IR04_07200 NONE
  IR04_02355 NONE
  IR04_07195 NONE
  IR04_07190  470414 ..  470432 - -10.3  -4.62441   TGGCAGATAAACAAA             GGACGAC TGAAT GTCGTCC             TTATCGATTATGCGT 100 33
  IR04_07185 NONE
  IR04_07180  469145 ..  469162 - -11.3  -3.24662   AGAAAATACACTCAA             CACCCGT ATTA ACGGGTG              TTGTTTTATGCTGGC  86 31
  IR04_02325  465008 ..  465024 -  -5.1  -3.16264   AATCATTGATTAATA              CATGGCT TAA AGGCATG              ATTGCGGCACTTTTG  53 15
  IR04_07145 NONE
  IR04_02310 NONE
  IR04_02305  461611 ..  461623 -  -4.7  -4.22346   TAAACGTATCCAAAA                CGCGG GTA CCGAG                GTGGTTGAAGCTAAG  64 305
  IR04_07125 NONE
  IR04_02295  459938 ..  459974 -  -2.4  -3.85698   TTCCTGCCTGAGAAA   CGTTGCTTTATTCGC GGCAAAGA ACG-ATAAAGCAGCG    GAATCATACCAAAAA  51 59
  IR04_07120  458826 ..  458845 - -13.6  -2.56475   GAACGTGATACTAAG            GAGGAGGC ATTT GCCTCCTC             TTTTGTTATTTTTAC  91 78
  IR04_07110 NONE
  IR04_07105 NONE
  IR04_02275  454072 ..  454091 - -12.2  -3.05844   TCCTCGAGTCTAAGA            TACCAGCC ACAG GGCTGGTA             TTTTTTTGCCTGTAC  86 148
  IR04_07085  451631 ..  451686 - -13.5  -3.31144   CCGTTAGTCTGACAA TAGACACTACGACACAAAACCACCGC CATTC GCGGTGGTTTTGCGTTG-AGAGTTTA AATCCCGTCACGCTC 100 23
  IR04_02240  448157 ..  448179 -  -6.2  -3.38522   TAGCCAGTTTAAATA           CGCCTGCATT TCC AATGCCGGAG           CGAGTGGATGCGGCG  59 339
  IR04_02235 NONE
  IR04_02230  446599 ..  446640 -  -4.6  -2.72379   GCAACGTTGGAATCA TTACGTTATTC-GGCATCA TTAAT TGATGGCGGAATAGCGCAA TGGGAGTTGCTACCC  48 171
  IR04_02225  445448 ..  445462 -  -9.2  -3.26471   TGATTTCGACAGTAA               CCCGCC TCG GGCGGA               TCCTTATGTGGCTGC  74 512
  IR04_02205 NONE
  IR04_02195  436250 ..  436280 -  -4.6  -2.66634   CACCCCACCACAGGA       TCGCACTATGGTGA ATG TCCCCTTAGTGCAG       GGCACTTTGTTTACC  48 298
  IR04_02185  433569 ..  433585 -  -5.8  -4.02139   TCAAAGCTAAAAATA              GGCGTA TAATG CACGCC              GTACGTTACGTAAGT  66 67
  IR04_02180  432363 ..  432373 -  -2.4  -3.38647   CAAAAGAATCAAAAC                 GGCG ATG CGCT                 ACCCGACCTTCGTGA  45 170
  IR04_02175  430866 ..  430882 -  -4.3  -3.51279   ATATTTCAGAAAAAC              GCCTTCC GCA AGATGGC              CGCTTTAACATCCGT  52 295
  IR04_02150 NONE
        fruK NONE
  IR04_06950 NONE
  IR04_02140  419264 ..  419282 -    -3  -2.98282   AGCAAGTATTACATA             GCGTGAAC AAA GTGCAAGC             AATTACTGGATAAAA  44 33
  IR04_06940  416352 ..  416378 - -13.8   -5.0538   GTTCACCTTAAAAAA         GAAACCAGCGCA CAG TTCGCTGGTTTC         ATTACTTTAGCCTTT 100 45
  IR04_06935  414507 ..  414532 - -16.3  -4.36903   TGTATGAAAGAGAAA         TAAGGGTGGCT TAAA AGCCACCCTTA          TTGTTTCTCGCAGAG 100 42
  IR04_06925  411488 ..  411508 - -15.5  -4.79352   CCATCCACAATAAAA            GAGGCCACA TCA TGTGGCCTC            TGGTTTTATCTCGTG 100 50
  IR04_02080 NONE
  IR04_02075 NONE
  IR04_06915  406208 ..  406226 - -10.3  -5.46657   GAGGGTAATAAAAAA             CCGCAGT GTTTA ACTGCGG             TTTGTCGATTAAACA 100 48
  IR04_01975 NONE
  IR04_01970  395917 ..  395930 -  -2.3   -3.6502   CAGGCGTTATTGAAA               GAAGC GCAA GCTGC                AGGCATTCAGGCCCA  50 11
  IR04_06845 NONE
  IR04_06840  391704 ..  391721 - -11.3  -5.23292   GCAGAGAAAACAAAA             CCGGACA AAAG TGTCCGG              TTTAATCAAGATCAT 100 84
  IR04_01925  390311 ..  390333 -  -4.1  -3.61983   CCAATTGATAGACAA           GGTCTTACC TGTGC AGTAAGGCC           TTTTTCTTGTCTTTG  54 422
  IR04_06825  387799 ..  387811 -  -5.5    -3.767   GAGTTAGTGACGAAA                CTCAC CTC GCGAG                TGGAAATGTCTTATT  59 140
  IR04_06810  384367 ..  384384 - -11.3  -4.44797   TGACGAATACGAAAA             CACCAGC TTCG GCTGGTG              TTTTTTTATGGGTAG 100 44
  IR04_01850  378177 ..  378193 -  -8.7  -3.33162   CACCGTATGGCAGAA              GCGAACA AAG CGTTCGC              TCATTACCGCTGGTA  71 281
  IR04_01810 NONE
  IR04_01805 NONE
  IR04_01800 NONE
  IR04_06730 NONE
  IR04_06725  372677 ..  372688 -  -7.2  -3.72453   ATGAATAATGCGAAA                GGCG CAGC CGCC                 AAGTAAGCATGAGTT  68 321
  IR04_01730 NONE
  IR04_01725  363757 ..  363769 -  -5.5  -4.56597   TTGGCGCGGGAAAAA                CGACT TTC AGCCG                AGGTTTTATTCGTGC  73 263
  IR04_06675  361977 ..  362005 -  -5.4  -3.12895   GTCTTCATTAACAGA        GTTATCCACAAA AAAAA TCTGTGGATAAA        ACAGTTGATAAACTC  53 339
  IR04_06620 NONE
  IR04_06615  357682 ..  357713 - -11.6  -4.11216   TGGCGAGCTTCAAAA      GACAACATCCCAGC CGAA GCTGGGATGTTGAG       TCTTCCGACTTGAAG 100 76
  IR04_01675 NONE
  IR04_06610 NONE
  IR04_01670 NONE
  IR04_01665 NONE
  IR04_06605  354995 ..  355015 -  -8.5  -2.94545   CAAAATAACTGAAAC            GTAAAATTA GCG TAATTTTAC            TACAATCTAGACGTT  65 112
  IR04_06600  353388 ..  353405 - -11.3  -5.25803   AATGCGTATAAAAAA             GCCCTGA GTAT TCAGGGC              TTTCATCATCATCGA 100 47
  IR04_06595  351707 ..  351720 -  -2.3  -3.72893   TACTCGCTTATCAAA               CACCG TGGG CTGTG                CTGGCTGATCTCAAC  50 415
  IR04_01615  348572 ..  348587 -  -4.7  -2.54687   TCAATCATCAGCAAC              TGGCA ATGCAG TGCCA               CGATTGCCGAACCCT  47 18
  IR04_01610  348206 ..  348226 -  -2.6  -3.13504   TTGCCAGTAAAATGA           TCC-GACTG CAAG CAATCAGGA            GAAGCAGAGTGGAAA  44 83
  IR04_06570  347479 ..  347494 - -10.4  -5.18357   CAAGCTATGAAAAAA              GGCACC TTAA GGTGCC               TTTTTTATTGGTCTA 100 94
  IR04_01560  342165 ..  342179 -  -4.2  -3.33737   GAGCAACTGGCAGAA               CAGTAC GAC GAACTG               AAAGCAGACTTCGAT  51 18
  IR04_01555  341515 ..  341525 -  -6.8  -3.63744   CTCTTGGCCAAAACA                 TGCG TAT CGCA                 TTCATGCCTTGGAAC  63 397
  IR04_06500  332403 ..  332416 -  -8.1  -4.53439   TTAAAGCCAAATAAA               GAGGC GTCA GCCTC                TTTTTCTTGAGCACT  82 39
  IR04_06485  329864 ..  329885 -  -2.3  -2.62244   CTGGTTAAGAAAAGG           CTAGAAATGG CGA CCATT-CTTG           ACATTACTTCGCTTG  40 29
        pssA  328416 ..  328435 - -13.6   -5.5112   TTGAGCAATAAAAAA            GCCGATGC GAAT GCATCGGC             TGGTAGTGTAAGCGT 100 44
  IR04_01445 NONE
  IR04_01440  326207 ..  326221 -  -3.5  -4.58685   AAAGGGGGTGAAAAA               CCTCC TCGCC GGAAG               ACCAAGGGTTCCTGT  66 476
  IR04_01425 NONE
  IR04_01420  324391 ..  324410 -  -9.2  -2.65808   AGTCGTAACAAGGTA            GCGCTAGG GGAA CCTGGCGC             TGGATCACCTCCTTA  68 159
  IR04_01400 NONE
  IR04_01395  321101 ..  321112 -  -4.4  -3.07222   ATGATGACGTGAATA                TCCA TGAC TGGA                 ATGATGTGATCTGGG  47 253
  IR04_06415 NONE
  IR04_06410  313546 ..  313575 - -18.1  -3.29739   TTGAAGGTACAGTAA       GTATTAAGCCCTC AGAT GAGGGCTTAATAC        TTATGAGTGCTTAGT 100 36
  IR04_01310 NONE
  IR04_06395 NONE
  IR04_06390  305985 ..  306003 -  -6.7  -3.94402   ATAAGCGGCAAACAA            GCGG-GAG AGAT CTCGCCGC             CGACTTTCGGCGTTA  69 38
  IR04_06385  303773 ..  303796 -  -8.9  -5.58522   GAGAGAAAACAAAAA          CTCCGGC-CA TGAGG TGCGCCGGAG          TTTGAAATCGCAAGC 100 93
  IR04_06380  303006 ..  303021 -  -8.2  -3.38991   ATCTTGTGAATAAGA              CAGCCC GAAT GGGCCG               CAGAGTGTCTTTATT  69 36
  IR04_06375  302487 ..  302503 -  -3.8  -3.40403   GGTTCGCGATGACAA              CTTTAT CTAAC ATAAAG              GTGGCCTCGATTATT  50 36
  IR04_06370  301053 ..  301068 - -10.4  -5.56372   AAAGCAAAACAAAAA              GCCCAC CGGA GTGGGC               TTTATCGTATTCCTA 100 113
        prmA NONE
  IR04_06360 NONE
  IR04_06355  298593 ..  298611 - -14.6  -5.52096   AAAGGTAATAAAAAA             GCCCTGAC AAA GTCAGGGC             TTAAAAAACGTCGGT 100 46
  IR04_06350 NONE
        glyA  296310 ..  296321 -  -4.4  -3.04263   ACGGCACCGCCAACA                CCAA CCAA TTGG                 TGTTTGAAGCCATGG  47 12
  IR04_01240  295854 ..  295866 -  -3.3  -2.96274   CTTCCTATAACGATA                TGCTC AGT GCGCA                TCAGCCTTATCAGCA  45 50
  IR04_06335 NONE
  IR04_06330 NONE
  IR04_01235  292802 ..  292838 -  -2.4  -4.83615   CATTCGCCACAAAAA    TGAATCACAAATGATA GTAAT TTTCATTATTGATTCA    AGTGTTATTTGTGCA  66 70
  IR04_01230 NONE
  IR04_06325 NONE
  IR04_06320 NONE
  IR04_01220 NONE
  IR04_06315  289928 ..  289952 - -11.5  -3.73775   GCCAGCGTCACCAAA          GGTTGCAGC GACGTGG GCTGCAACC          TGTGTGGTTAGATTG  90 73
  IR04_06310  288031 ..  288052 - -14.5  -2.99471   GGACGCTGATACACA           GAGAGAGCC TCAC GGCTCTCTC            TTTTTTCATGGTGCA 100 68
  IR04_01190  282393 ..  282406 -  -2.3  -4.65916   TGGACGCGAAGAAAA               CCTCA GCTA TGTGG                TGACGGTGCCTAAGC  63 357
  IR04_06285 NONE
  IR04_01180 NONE
  IR04_01175 NONE
        purH NONE
  IR04_01160 NONE
  IR04_01155 NONE
  IR04_06275 NONE
  IR04_01150 NONE
  IR04_01145 NONE
  IR04_06260 NONE
  IR04_01140  275417 ..  275436 -    -2  -2.77947   GAATAATTCGCAAAC            GCCCTGTT GATT AATGGGGC             ATTTACTGAGCAATA  41 99
  IR04_01135 NONE
  IR04_01130  272490 ..  272510 -  -4.8  -5.06451   GATGACGGTAAAAAA           TGC-CAAAG TGAA CTTTGAGCA            TCAGCTTGAAAAGCT  80 267
  IR04_06240 NONE
  IR04_06235 NONE
  IR04_01115 NONE
  IR04_06230  269373 ..  269411 -    -8  -2.60496   CTTGGTGTGAAATAC   CCCCTCCCGTCCTCCCCC CTA GAAGGAGGAGGGGTAAGA   TCGATGCGCGCGAAT  60 54
  IR04_01100 NONE
  IR04_01095 NONE
  IR04_06210 NONE
        araD NONE
  IR04_01085 NONE
  IR04_06205 NONE
        ulaD NONE
  IR04_01075 NONE
  IR04_01065  260770 ..  260790 -  -8.3  -3.01712   TGTTGTTTTGTAATA            GCTCCTAGA CAA TATAGGAGC            CTAAATATGAGCGAG  65 285
  IR04_01050  257440 ..  257450 -  -2.6  -3.61654   GAGATGTATCGCAAA                 TTTT GTC AAAA                 AAACAAATTTGACCC  50 504
  IR04_01025  252083 ..  252098 -    -4  -3.40403   TGTTTTCGAGTATAA              CAAAGA ATTT CCTTTG               ACTGCTGAATATTTT  50 438
  IR04_00995  246838 ..  246850 -  -2.6  -3.15354   TACGGCAATCGAACA                GGAG GATGA CCCC                GTATTGCTAGTATTG  45 2
  IR04_06125 NONE
  IR04_00990 NONE
  IR04_06120 NONE
  IR04_06115 NONE
  IR04_06110 NONE
  IR04_06105 NONE
  IR04_06100 NONE
  IR04_06095 NONE
  IR04_06090 NONE
  IR04_06085 NONE
  IR04_00965 NONE
  IR04_06080 NONE
  IR04_06075 NONE
  IR04_00960 NONE
  IR04_06070 NONE
  IR04_00950  232113 ..  232126 -  -2.3  -3.77484   CAGCAAAATGGTAAA               GTGCT CGGA AGCGC                GACAGGACGAGGCAC  51 348
  IR04_06055 NONE
  IR04_00945 NONE
  IR04_06050  229929 ..  229944 - -10.4   -5.2189   TTAATCATTAAAAAA              GGGAGC TGCG GCTCCC               TTTGTCTTTGTTACT 100 60
        coaD NONE
  IR04_00935  227076 ..  227090 -  -2.7  -5.31275   TTTCATTAGAAAAAA               GCCGC GAAGA GTGGC               AGTCGGAGCCTGAGT  77 152
        nadE  223789 ..  223800 -  -5.8  -2.62463   CTTACGACTCACAAG                GGGT CAAT ACCC                 TACATGCGATTAAGC  52 116
  IR04_00915 NONE
  IR04_06005 NONE
        slmA NONE
  IR04_00910 NONE
  IR04_05995 NONE
  IR04_00905 NONE
  IR04_05990  219350 ..  219368 - -13.2  -5.46698   CCTAAAACGAAAAAA             CAGCCTCA AAA TGAGGCTG             TTTTTCTAGCATTAA 100 58
  IR04_05975  216535 ..  216552 -  -6.2  -4.93877   GGGGATTAAATAAAA             GCCCCG AATCAA CGAGGC              TTTAAGGGTTATTCG  84 34
  IR04_05970  215949 ..  215966 -  -9.8  -4.34402   GGGGGGATAGTAAAA             GCGCCC AATCTA GGGCGC              TTTCTTTTCAACGAT  93 66
  IR04_05955 NONE
  IR04_00875 NONE
  IR04_00870  210575 ..  210596 -  -4.3  -3.14132   GTGCTCGGTCATCAA           GCCGCGCAA AGTT TCGCGCAGG            TGAATTTTATCTACG  49 522
  IR04_00860  208106 ..  208124 -  -5.2  -4.69053   TATCACCCAACAAAA             TGCGCTGG TGA CCAACCCA             ACGACTTTTGTGGCG  75 471
  IR04_05930  204497 ..  204510 -  -9.5  -4.72986   GAGGCGCAGTAAAAA               GCCCC TTGC GGGGC                TTTATCGTGTCTCAA 100 44
  IR04_00825  203447 ..  203461 -  -2.8  -5.33785   AACTACGACAAAAAA               CTGTTT GCC AAACTG               CGTAAGCTGCGTAAA  77 12
  IR04_05910 NONE
  IR04_00815 NONE
  IR04_05905  198797 ..  198819 - -16.4  -5.14563   GGTGCGAGTAAAAAA           TGATGGGCAG ACT CTGCCCATCA           CTTTTTGAGTTAACG 100 42
  IR04_05900 NONE
  IR04_05895  197101 ..  197119 -  -5.2  -3.01924   TACCGCTTTGTAAGA             GATCTCGC ACA GCATGATC             GGCCAAAGTCGGATC  52 39
  IR04_00795  195191 ..  195208 -  -3.3  -3.29144   GTACTCGGCGTATAA             CGAGCTC GATG AAGCACG              CTTTGTGGTCAGCAA  48 120
  IR04_00780 NONE
  IR04_05880 NONE
  IR04_00775 NONE
  IR04_00770 NONE
  IR04_00765 NONE
  IR04_05870 NONE
  IR04_00760 NONE
  IR04_05865 NONE
  IR04_00755 NONE
  IR04_05860  184136 ..  184153 -  -2.7  -3.05596   TATTTCCTTATTTAA             TCTATCT CTTA AGCTAGA              AATCTTATCTTCATA  43 234
  IR04_00735  180630 ..  180643 -  -3.1  -4.29396   AATTATTCAGGAAAA               GGTGTC AAC GAC-CC               AAATTAAGCACCTTT  61 370
        tnaA NONE
  IR04_05820 NONE
  IR04_00715 NONE
  IR04_05815  177002 ..  177012 -    -4  -2.88366   TTGCTAATCAAGAAT                 TAAC GTG GTTA                 CCAATGGATTTTTTG  46 23
  IR04_00710 NONE
  IR04_00705 NONE
  IR04_05810 NONE
  IR04_00700 NONE
  IR04_00695 NONE
  IR04_00690  171106 ..  171120 -   -10  -3.25015   CCGAATGATTACCAA               CGCATC AAA GATGCG               AAAGGTGTAGATCTC  76 21
  IR04_00685 NONE
  IR04_00680 NONE
  IR04_00675  169822 ..  169850 -  -2.5  -3.72588   GAAGCGAGAGTGAAA       CCCGA-CAAATC GTTAAT GATCTGCTCGAG        CATGTCGGCTTAGGT  50 224
  IR04_05750  166427 ..  166460 - -19.9  -4.07618   TGTTTAAGAAGTAAA     TAAAGAAGGGCTTGT CAAA ACAAGCCCTTCTTTA      TTATCAATTGATGGA 100 57
  IR04_05740 NONE
  IR04_05735  162526 ..  162542 -  -2.1  -3.89346   AAAAACATCAGTAAA              GCGCATG ATG CCTCCGC              TTACAGCATTGGGGT  52 26
  IR04_05730  159380 ..  159395 -    -9  -5.55769   TTGGATAATAAAAAA              GGCCAT CGAA ATGGCC               TTTTGTGATGAGACT 100 51
  IR04_05725  158977 ..  159013 -  -8.2   -5.2291   ACACTATAATAAAAA   CCAAG-AAGGCTTAGTC GAAT GACTAAGCCTTTCTTTA    TTGAGTGCTAAGTGG 100 66
  IR04_05715 NONE
  IR04_00630  154798 ..  154809 -  -4.4   -4.7254   ACTGTTTATTAAAAA                CACA GCAC TGTG                 CAAAATCGCAAGATG  71 411
  IR04_00620  153002 ..  153024 - -12.8  -2.60615   AGGTTGTTTAAACAG           CAACCCGAAA CTC CTTCGGGTTG           TATGGTTAAGTGACT  91 117
        glpT  151251 ..  151263 -  -3.3  -3.92324   CCTCGCAAGAGCAAA                GCAGG GGA CCTTC                GGGCCTTGCGCTACC  56 94
  IR04_00610 NONE
  IR04_05685  149990 ..  150016 -    -5  -3.10112   ATCGAATTTATGCAA         GCGCACCACCAT GGG AGGAAAGTGCGC         TGAACATAAAGCTTG  50 53
  IR04_05675  147231 ..  147263 - -18.7  -2.71144   CACTGTCTTTAATCA      CAAAAGCCAGTCAGA ACA TCTGACTGGCTTTTA      TTGTTTAATGCGTCA 100 43
  IR04_05665  143831 ..  143860 - -14.5   -3.6215   GTAAGCCACGCTAAA       CAAAAAACGAGCC ATCT GGCTCGTTTTTTA        TGCGGTTACTTTTTG 100 31
  IR04_00555 NONE
  IR04_05650  140899 ..  140918 -  -9.3  -4.77567   AGCTTGATAAGAAAA            GGTCTGG TCAATG CCAGACC             TTTTTTGTCTCTATC 100 176
  IR04_05625 NONE
  IR04_05620  135872 ..  135885 -  -9.5  -5.48825   TATGATGTAAAAAAA               CCGCC TCGC GGCGG                TTTTTTTACATCATG 100 31
  IR04_05595 NONE
  IR04_05590  132408 ..  132420 -  -4.7  -3.14881   CAATTGGTGGAGCAA                CTGCC GCT GGCCG                ATGATGTGAAGTTAG  51 399
  IR04_05575  129616 ..  129646 - -10.5  -2.94825   GTAGTGGAATTAAAT       GCGGAAAAAGAGG GTAAA CCTCTCTTTGCGC       TTTTCCTCAATTTCT  76 39
  IR04_05570  128620 ..  128646 - -14.5   -2.8733   CGGTGCAGAAAATAG         CCAACGGCAGC GTTAG GCTGCCGTTGA         GTGATGCTCAGGTGA 100 97
  IR04_05565 NONE
  IR04_05560  125875 ..  125885 -  -6.8  -3.91798   GAAGCGGCAATCAAA                 TCGG TGG CCGA                 TCCCGCCCGTGTCGG  66 437
  IR04_05520  118624 ..  118653 - -15.3  -3.17714   CTAAATCCTTATCAA       TAAAAAAGAGCAC AATC GTGCTCTTTTTTA        TTATGCGTCAGTGGC 100 65
        hemC  114708 ..  114724 -  -2.2  -3.22653   AGTACTGTCATAACA              CTCTCA ATCAA TGCGAG              ATAAGCAATCAGTCT  43 65
  IR04_05500 NONE
  IR04_05495 NONE
  IR04_00455 NONE
  IR04_05490  111512 ..  111537 - -19.1  -3.33162   GACCGCATTCCACAA         CAAGGCCACCG CATG CGGTGGCCTTG          TTGTTTGTGCTCTGA 100 48
  IR04_00445  109871 ..  109886 -  -4.7  -3.74693   CTGGAGCGCACCAAA              GCAGA AAGTCG TCTGC               AAGATGCGATCATTG  59 170
  IR04_00440 NONE
  IR04_00435  107688 ..  107706 -  -2.3  -4.08767   TCCAGCGGCGGAAAA             CAGGGCC GTTAT GATCCTG             TGATGAGTGCAATGG  55 247
  IR04_05460  106612 ..  106627 -  -8.2   -5.4505   TGTGGTAATAAAAAA              CCCCGC ATGA GCGAGG               TTTGTCGTGACATAG 100 49
  IR04_00420  104187 ..  104214 -  -2.6  -3.70902   CCTTTGATACGGAAA        CCGACAACCTTG ATTA CATGGTCGCCAA         TTTGGTGGGGATGTC  51 209
  IR04_00395 NONE
  IR04_05440 NONE
  IR04_00385 NONE
  IR04_05435 NONE
  IR04_05430 NONE
  IR04_00380 NONE
  IR04_05420   95517 ..   95544 - -13.6  -3.77196   CGACGAGTCAGTAAA        CAAAAAAGCGGC GGTT GCCGCTTTTTTA         CTCTCAGAGTATCGA 100 75
  IR04_00360 NONE
  IR04_05410 NONE
        ubiA NONE
  IR04_00350   92595 ..   92608 -  -3.8  -3.28712   CTTGGCGCGTGACAA               CCTG ATTAAG CAGG                TGGATTGTTACTTAT  50 22
  IR04_00345 NONE
  IR04_05395   89983 ..   90018 -  -2.7   -4.1023   AATCTCAAATAAGAA    GGCAAG-TTGTTGAGA ATTTA TCTCAACAATCTTCAC    ATCCAAGTGCTGTTG  57 22
  IR04_05390   89029 ..   89043 -  -4.2  -4.09739   TCAACGTTTGCAAAA               TCAGTG ACA CACAGA               ACACCTCAGTAACGA  61 100
  IR04_05385 NONE
  IR04_00330   86300 ..   86318 - -11.7  -3.77832   GCGTAAAGTCAAGAA             GGGCACC TTATC GGTGCCC             TTTGTTTTTGGATCA  95 366
  IR04_00325 NONE
  IR04_00320 NONE
  IR04_00315   82962 ..   82981 - -10.7  -3.08679   GGTGCTCACTGAAGA            GTGGCGG ATTGCG CCGCCAC             CGTTGGAAATTGCCT  79 37
  IR04_05340 NONE
  IR04_00290   76953 ..   76965 -  -3.4  -4.30987   ACGCGGTAGAAGAAA                TGCA GCACA TGCA                GCGTCTGTTCACTTA  60 520
  IR04_05320 NONE
  IR04_05315   75218 ..   75234 - -12.3   -5.1287   CGCAGACCTAAAAAA              GCCCATC TCC GATGGGC              TTTTGCGTCTCTTGA 100 59
  IR04_05295   70515 ..   70545 -  -6.9  -4.38447   ATAGAACAAGATAAA       TTCACGCTGAG GCTATTTTA CTCAGCGTGCA       TCCTGTGTATATTGT  74 457
  IR04_05280   68178 ..   68194 -  -2.9  -3.29947   TATGGATTATACGAA              CCACATA CAG CAAGTGG              ACGAGAGCGAATAAG  46 83
  IR04_00255 NONE
  IR04_05275   66272 ..   66295 - -11.8  -5.15167   TAGCAGCAACAAAAA          GAAAACCGCC ATAC GACGGTTTTC           TTTTCTATTCTATGC 100 56
        deoD NONE
  IR04_00225 NONE
  IR04_00220   58148 ..   58164 -  -2.9  -2.73441   GAGCAGGTGCGAAAG              CAGGTCA TAG TGATCCG              GTGGTTCTGTATGGA  41 5
  IR04_00215   56444 ..   56455 -  -7.2  -2.98823   GTCTCTGGATATAGA                CCCG AAAC CGGG                 TGATCTAGCCATGGG  61 153
  IR04_00210 NONE
  IR04_00205   54823 ..   54840 -  -5.5  -3.53722   TTGACATCCAGAGAA             TCTAGCG GAGA CGCTGGA              GTGCCTTCGGGAGCT  57 114
  IR04_05200   52704 ..   52718 -  -7.1   -2.5655   TTGACCTAGAGGAAC               TCGCC GAACA GGCGA               TTGAAAACGAAATGT  56 65
  IR04_00190   49980 ..   49993 -  -6.7  -3.33492   TTATTTATCGGACAA               GCAAG CCCG CTTGC                GGCGCATTATACGGG  61 105
  IR04_05175 NONE
  IR04_05170   48279 ..   48305 - -13.8  -3.02698   TCATCGCATACAAAG         TTAAAGCCGCGT TAG ACGCGGCTTTAT         TGCATTAGTGGGGTA 100 45
  IR04_00180 NONE
  IR04_00175 NONE
  IR04_00170 NONE
  IR04_00165   45407 ..   45421 -  -2.8  -3.02144   TGAGGGGCGTCAATA               TCTCAC CAA GCAAGA               TCAGCTTTACATCTC  43 242
  IR04_05145 NONE
  IR04_00160 NONE
         fmt   43299 ..   43333 -  -8.6  -5.34381   AAACCTAAACAAAAA     GCCAAACCCTAGCC ATCCATA GGCTAGGGTTCAGG     ATTAACTGAGTTGGG 100 27
  IR04_00150 NONE
  IR04_05135 NONE
        trkA NONE
  IR04_00140 NONE
  IR04_05125 NONE
  IR04_05120 NONE
  IR04_00135 NONE
  IR04_05100   35949 ..   35962 -  -9.5   -5.8187   GACTTAATAAAAAAA               GCGGC TTTC GCCGC                TTGCTCATTTTGGGG 100 216
  IR04_00120 NONE
  IR04_05095   34275 ..   34292 - -11.3  -5.10461   GTCATTGAATAAAAA             GGGCTCA TTAC TGAGCCC              TTTACCATACTGGTG 100 45
  IR04_05085   32586 ..   32610 - -14.3  -2.92951   GAGAGGCTGATAAAG          CGAAGGGAGCC ATT GGCTCCCTTTG          TCTTTTTTCTCAATA 100 59
  IR04_00110   31914 ..   31929 -  -6.1  -3.55622   TTCAAGGCGGTGAAA              CCCTG ACTAAG CAGGG               ATGGTATCTGCTGAT  61 64
  IR04_00100 NONE
  IR04_00095 NONE
  IR04_05070 NONE
  IR04_05065 NONE
  IR04_05060 NONE
  IR04_05055 NONE
  IR04_05050   23232 ..   23250 - -11.7  -3.76586   CGGTAAAGAGAAAGA             GCCCCAC ATAAG GTGGGGC             GAAGATTATTTAGCT  95 31
  IR04_05045   21976 ..   22000 - -11.5  -2.83747   TAAGGTTCACAATGA          GAAACCCGC CAACAGT GCGGGTTTC          TTTCCATTCGAATCA  81 53
  IR04_05035   21221 ..   21236 -    -9  -5.14965   ATTGCTATCAAAAAA              GACTGC CTCG GCAGTC               TTTTTTATTGTCATC 100 76
  IR04_05020 NONE
  IR04_05015   16813 ..   16834 - -14.5  -4.91852   GCGAGCAAAAACAAA           GCCCAACTC TTTT GAGTTGGGC            TTAAAGTTTGTTGAC 100 60
        avtA   15246 ..   15272 - -10.8  -4.55118   GAACGCGAGATAAAA         CGAAGCCCGCGA ATT TCGCGGGCTTTT         TGCATTGCTTAGTTT 100 47
  IR04_00045    8742 ..    8757 -  -4.6  -4.07687   ACGCTTGCCGTAAAA              TCGAGC AGTT GCGCGA               AGAGAGTCACGATAT  63 254
  IR04_00035 NONE
  IR04_04970    6299 ..    6323 - -13.7  -3.09908   CCTTCCTAAAATAAT          CAAAGGTGGGA AAG TCCCACCTTTA          TAGAATAGAGTCTAG 100 56
  IR04_04965 NONE
  IR04_04960    4689 ..    4705 -  -5.1  -3.14132   CGGCGTGGGCATTAA              GGTCTTC ACT GAAGACG              CCGACGCCTCTCAAC  53 191
        rpmH    4431 ..    4461 -    -4  -2.57683   AGACTTTTTGATAAT       GTTCGGGAGTTA ACAAACG TAACTCCCGATT       GAATGCGTACGTACT  45 56
  IR04_04950    4094 ..    4122 -  -6.7  -4.25458   AAGTGGACTAATAAA        CCACTGGTAAAGT TTT ACAATACCAATGG        CTAACCACGAGAAGG  74 26
  IR04_00010 NONE
  IR04_04945    2233 ..    2250 - -10.5  -5.11063   AGCAGCCAACAAAAA             GGCGACC TTTT GGCCGCC              TCTTTATTACTCAAT 100 46
