Vch1786_I0009	SM00487	DEAD-like helicases superfamily
Vch1786_I0009	SM00490	helicase superfamily c-terminal domain
Vch1786_I0009	SM00847	Helicase associated domain (HA2)  Add an annotation
Vch1786_I0014	SM00938	Nitrogen regulatory protein P-II
Vch1786_I0018	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0020	SM01068	Putative carbohydrate binding domain
Vch1786_I0024	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0025	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0029	SM00091	PAS domain
Vch1786_I0029	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0029	SM00387	Histidine kinase-like ATPases
Vch1786_I0029	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I0029	SM00448	cheY-homologous receiver domain
Vch1786_I0039	SM00363	S4 RNA-binding domain
Vch1786_I0043	SM01103	Vch1786_I0043
Vch1786_I0045	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0052	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I0052	SM00322	K homology RNA-binding domain
Vch1786_I0056	SM01387	Vch1786_I0056
Vch1786_I0057	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I0057	SM00322	K homology RNA-binding domain
Vch1786_I0058	SM00028	Tetratricopeptide repeats
Vch1786_I0059	SM00347	helix_turn_helix multiple antibiotic resistance protein
Vch1786_I0063	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I0063	SM00091	PAS domain
Vch1786_I0063	SM00267	diguanylate cyclase
Vch1786_I0068	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I0068	SM00267	diguanylate cyclase
Vch1786_I0092	SM00479	Vch1786_I0092
Vch1786_I0103	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_I0125	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0135	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0139	SM00327	von Willebrand factor (vWF) type A domain
Vch1786_I0142	SM00778	Zinc-binding domain of primase-helicase
Vch1786_I0145	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_I0147	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I0160	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I0162	SM00487	DEAD-like helicases superfamily
Vch1786_I0162	SM00490	helicase superfamily c-terminal domain
Vch1786_I0165	SM00937	Vch1786_I0165
Vch1786_I0167	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0171	SM00927	DNA mismatch repair enzyme MutH
Vch1786_I0176	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Vch1786_I0182	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Vch1786_I0185	SM00904	Riboflavin kinase
Vch1786_I0197	SM00448	cheY-homologous receiver domain
Vch1786_I0197	SM00850	LytTr DNA-binding domain
Vch1786_I0200	SM00830	Chorismate mutase type II
Vch1786_I0202	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0206	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I0206	SM00267	diguanylate cyclase
Vch1786_I0208	SM00830	Chorismate mutase type II
Vch1786_I0212	SM00363	S4 RNA-binding domain
Vch1786_I0214	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0214	SM01086	C-terminal, D2-small domain, of ClpB protein
Vch1786_I0227	SM00448	cheY-homologous receiver domain
Vch1786_I0227	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I0228	SM00091	PAS domain
Vch1786_I0228	SM00387	Histidine kinase-like ATPases
Vch1786_I0228	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I0234	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0244	SM00116	Domain in cystathionine beta-synthase and other proteins.
Vch1786_I0248	SM01323	Vch1786_I0248
Vch1786_I0257	SM00271	DnaJ molecular chaperone homology domain
Vch1786_I0262	SM00562	Vch1786_I0262
Vch1786_I0264	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I0268	SM00564	beta-propeller repeat
Vch1786_I0269	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0273	SM00116	Domain in cystathionine beta-synthase and other proteins.
Vch1786_I0273	SM01240	Vch1786_I0273
Vch1786_I0275	SM00495	Chitin-binding domain type 3
Vch1786_I0285	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0289	SM00849	Metallo-beta-lactamase superfamily
Vch1786_I0296	SM00448	cheY-homologous receiver domain
Vch1786_I0297	SM00091	PAS domain
Vch1786_I0297	SM00387	Histidine kinase-like ATPases
Vch1786_I0302	SM00764	Citrate lyase ligase C-terminal domain
Vch1786_I0318	SM00487	DEAD-like helicases superfamily
Vch1786_I0318	SM00490	helicase superfamily c-terminal domain
Vch1786_I0320	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I0328	SM00247	Beta/gamma crystallins
Vch1786_I0331	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0332	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I0344	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_I0346	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0346	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0350	SM01276	Vch1786_I0350
Vch1786_I0362	SM00271	DnaJ molecular chaperone homology domain
Vch1786_I0372	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_I0375	SM01211	Vch1786_I0375
Vch1786_I0376	SM01321	Vch1786_I0376
Vch1786_I0395	SM00861	Transketolase, pyrimidine binding domain
Vch1786_I0400	SM00981	Vch1786_I0400
Vch1786_I0404	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Vch1786_I0404	SM00475	5'-3' exonuclease
Vch1786_I0406	SM00267	diguanylate cyclase
Vch1786_I0407	SM00028	Tetratricopeptide repeats
Vch1786_I0413	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0413	SM00930	Vch1786_I0413
Vch1786_I0415	SM00354	helix_turn _helix lactose operon repressor
Vch1786_I0417	SM00642	Alpha-amylase domain
Vch1786_I0424	SM00984	UDP binding domain
Vch1786_I0435	SM00710	Parallel beta-helix repeats
Vch1786_I0448	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I0451	SM00936	Penicillin-binding protein 5, C-terminal domain 
Vch1786_I0463	SM00116	Domain in cystathionine beta-synthase and other proteins.
Vch1786_I0463	SM01091	Transporter associated domain
Vch1786_I0466	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I0474	SM00771	ZipA, C-terminal domain (FtsZ-binding)
Vch1786_I0475	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Vch1786_I0475	SM00292	breast cancer carboxy-terminal domain
Vch1786_I0475	SM00532	Ligase N family
Vch1786_I0478	SM00422	helix_turn_helix, mercury resistance
Vch1786_I0479	SM00244	prohibitin homologues
Vch1786_I0487	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I0488	SM00387	Histidine kinase-like ATPases
Vch1786_I0495	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Vch1786_I0495	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Vch1786_I0511	SM00479	Vch1786_I0511
Vch1786_I0516	SM00478	endonuclease III
Vch1786_I0516	SM00525	Vch1786_I0516
Vch1786_I0518	SM00900	Vch1786_I0518
Vch1786_I0524	SM00487	DEAD-like helicases superfamily
Vch1786_I0524	SM00490	helicase superfamily c-terminal domain
Vch1786_I0525	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0525	SM00448	cheY-homologous receiver domain
Vch1786_I0528	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I0529	SM00852	Probable molybdopterin binding domain
Vch1786_I0533	SM00267	diguanylate cyclase
Vch1786_I0535	SM00116	Domain in cystathionine beta-synthase and other proteins.
Vch1786_I0543	SM00226	Low molecular weight phosphatase family
Vch1786_I0553	SM00448	cheY-homologous receiver domain
Vch1786_I0557	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0559	SM00493	Vch1786_I0559
Vch1786_I0565	SM00344	helix_turn_helix ASNC type
Vch1786_I0570	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_I0570	SM00267	diguanylate cyclase
Vch1786_I0572	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Vch1786_I0573	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Vch1786_I0577	SM00495	Chitin-binding domain type 3
Vch1786_I0577	SM00636	Vch1786_I0577
Vch1786_I0580	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_I0585	SM00448	cheY-homologous receiver domain
Vch1786_I0586	SM00448	cheY-homologous receiver domain
Vch1786_I0588	SM00387	Histidine kinase-like ATPases
Vch1786_I0588	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I0589	SM00387	Histidine kinase-like ATPases
Vch1786_I0590	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I0590	SM00448	cheY-homologous receiver domain
Vch1786_I0591	SM00448	cheY-homologous receiver domain
Vch1786_I0592	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0592	SM00387	Histidine kinase-like ATPases
Vch1786_I0598	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0599	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0607	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0608	SM00267	diguanylate cyclase
Vch1786_I0612	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0616	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I0616	SM00876	Biotin and Thiamin Synthesis associated domain
Vch1786_I0634	SM00528	Domain in histone-like proteins of HNS family
Vch1786_I0646	SM00357	Cold shock protein domain
Vch1786_I0648	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0648	SM01086	C-terminal, D2-small domain, of ClpB protein
Vch1786_I0659	SM00448	cheY-homologous receiver domain
Vch1786_I0660	SM00387	Histidine kinase-like ATPases
Vch1786_I0681	SM00481	DNA polymerase alpha chain like domain
Vch1786_I0683	SM00363	S4 RNA-binding domain
Vch1786_I0684	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0685	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0689	SM00267	diguanylate cyclase
Vch1786_I0692	SM00919	Malic enzyme, NAD binding domain
Vch1786_I0692	SM01274	Vch1786_I0692
Vch1786_I0698	SM00271	DnaJ molecular chaperone homology domain
Vch1786_I0698	SM00671	Sel1-like repeats.
Vch1786_I0704	SM00020	Trypsin-like serine protease
Vch1786_I0710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Vch1786_I0710	SM00866	Vch1786_I0710
Vch1786_I0713	SM00841	Elongation factor P, C-terminal
Vch1786_I0713	SM01185	Vch1786_I0713
Vch1786_I0715	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I0716	SM00486	DNA polymerase type-B family
Vch1786_I0717	SM00421	helix_turn_helix, Lux Regulon
Vch1786_I0717	SM00448	cheY-homologous receiver domain
Vch1786_I0718	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Vch1786_I0718	SM00465	GIY-YIG type nucleases (URI domain)
Vch1786_I0724	SM00267	diguanylate cyclase
Vch1786_I0728	SM00873	B3/4 domain
Vch1786_I0728	SM00874	tRNA synthetase B5 domain
Vch1786_I0728	SM00896	Ferredoxin-fold anticodon binding domain
Vch1786_I0730	SM00411	bacterial (prokaryotic) histone like domain
Vch1786_I0745	SM00855	Phosphoglycerate mutase family
Vch1786_I0749	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0752	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0752	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0752	SM01049	Vch1786_I0752
Vch1786_I0756	SM00852	Probable molybdopterin binding domain
Vch1786_I0762	SM00434	DNA Topoisomerase IV
Vch1786_I0763	SM00450	Rhodanese Homology Domain
Vch1786_I0764	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_I0774	SM00849	Metallo-beta-lactamase superfamily
Vch1786_I0780	SM00387	Histidine kinase-like ATPases
Vch1786_I0780	SM01049	Vch1786_I0780
Vch1786_I0781	SM00421	helix_turn_helix, Lux Regulon
Vch1786_I0781	SM00448	cheY-homologous receiver domain
Vch1786_I0782	SM00347	helix_turn_helix multiple antibiotic resistance protein
Vch1786_I0784	SM00495	Chitin-binding domain type 3
Vch1786_I0790	SM00354	helix_turn _helix lactose operon repressor
Vch1786_I0793	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0793	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0794	SM00479	Vch1786_I0794
Vch1786_I0795	SM00100	Cyclic nucleotide-monophosphate binding domain
Vch1786_I0795	SM00116	Domain in cystathionine beta-synthase and other proteins.
Vch1786_I0797	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0797	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_I0800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0810	SM00091	PAS domain
Vch1786_I0810	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0814	SM01005	Alanine racemase, C-terminal domain
Vch1786_I0815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0817	SM00387	Histidine kinase-like ATPases
Vch1786_I0818	SM00448	cheY-homologous receiver domain
Vch1786_I0821	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0821	SM00387	Histidine kinase-like ATPases
Vch1786_I0821	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I0822	SM00448	cheY-homologous receiver domain
Vch1786_I0822	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I0828	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0837	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Vch1786_I0837	SM00895	Vch1786_I0837
Vch1786_I0850	SM00448	cheY-homologous receiver domain
Vch1786_I0850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_I0851	SM00073	Histidine Phosphotransfer domain
Vch1786_I0851	SM00091	PAS domain
Vch1786_I0851	SM00387	Histidine kinase-like ATPases
Vch1786_I0851	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I0851	SM00448	cheY-homologous receiver domain
Vch1786_I0855	SM00267	diguanylate cyclase
Vch1786_I0856	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Vch1786_I0860	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0863	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_I0868	SM00028	Tetratricopeptide repeats
Vch1786_I0868	SM00267	diguanylate cyclase
Vch1786_I0871	SM00267	diguanylate cyclase
Vch1786_I0873	SM00267	diguanylate cyclase
Vch1786_I0877	SM00267	diguanylate cyclase
Vch1786_I0877	SM01079	Vch1786_I0877
Vch1786_I0878	SM00479	Vch1786_I0878
Vch1786_I0882	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0882	SM00487	DEAD-like helicases superfamily
Vch1786_I0882	SM00490	helicase superfamily c-terminal domain
Vch1786_I0882	SM00847	Helicase associated domain (HA2)  Add an annotation
Vch1786_I0894	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0895	SM00448	cheY-homologous receiver domain
Vch1786_I0897	SM00073	Histidine Phosphotransfer domain
Vch1786_I0897	SM00260	Two component signalling adaptor domain
Vch1786_I0897	SM00387	Histidine kinase-like ATPases
Vch1786_I0897	SM01231	Vch1786_I0897
Vch1786_I0898	SM00448	cheY-homologous receiver domain
Vch1786_I0899	SM00138	Methyltransferase, chemotaxis proteins 
Vch1786_I0901	SM00448	cheY-homologous receiver domain
Vch1786_I0902	SM00260	Two component signalling adaptor domain
Vch1786_I0903	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0904	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0904	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0905	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Vch1786_I0905	SM00091	PAS domain
Vch1786_I0905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0906	SM00487	DEAD-like helicases superfamily
Vch1786_I0906	SM00490	helicase superfamily c-terminal domain
Vch1786_I0911	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I0911	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I0928	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0934	SM00100	Cyclic nucleotide-monophosphate binding domain
Vch1786_I0934	SM00419	helix_turn_helix, cAMP Regulatory protein
Vch1786_I0944	SM00897	FIST N domain
Vch1786_I0944	SM01204	Vch1786_I0944
Vch1786_I0945	SM00387	Histidine kinase-like ATPases
Vch1786_I0945	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I0945	SM00448	cheY-homologous receiver domain
Vch1786_I0946	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0948	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0961	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I0966	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I0970	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I0984	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I0986	SM00981	Vch1786_I0986
Vch1786_I0995	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Vch1786_I0995	SM00245	tail specific protease
Vch1786_I0996	SM00945	ProQ/FINO family
Vch1786_I0997	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1002	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I1011	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Vch1786_I1018	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1019	SM00387	Histidine kinase-like ATPases
Vch1786_I1019	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I1020	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1020	SM00448	cheY-homologous receiver domain
Vch1786_I1023	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1025	SM00852	Probable molybdopterin binding domain
Vch1786_I1031	SM01144	Vch1786_I1031
Vch1786_I1033	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I1051	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1052	SM00420	helix_turn_helix, Deoxyribose operon repressor
Vch1786_I1052	SM01134	Vch1786_I1052
Vch1786_I1056	SM00354	helix_turn _helix lactose operon repressor
Vch1786_I1061	SM00849	Metallo-beta-lactamase superfamily
Vch1786_I1066	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1073	SM01022	Vch1786_I1073
Vch1786_I1081	SM00248	ankyrin repeats
Vch1786_I1082	SM01060	Vch1786_I1082
Vch1786_I1088	SM00822	Vch1786_I1088
Vch1786_I1089	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I1090	SM00267	diguanylate cyclase
Vch1786_I1098	SM00267	diguanylate cyclase
Vch1786_I1101	SM00260	Two component signalling adaptor domain
Vch1786_I1101	SM00448	cheY-homologous receiver domain
Vch1786_I1103	SM00448	cheY-homologous receiver domain
Vch1786_I1104	SM00387	Histidine kinase-like ATPases
Vch1786_I1111	SM00028	Tetratricopeptide repeats
Vch1786_I1111	SM00386	HAT (Half-A-TPR) repeats
Vch1786_I1120	SM00112	Cadherin repeats.
Vch1786_I1129	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1134	SM00487	DEAD-like helicases superfamily
Vch1786_I1134	SM00490	helicase superfamily c-terminal domain
Vch1786_I1135	SM00363	S4 RNA-binding domain
Vch1786_I1137	SM00448	cheY-homologous receiver domain
Vch1786_I1137	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I1138	SM00387	Histidine kinase-like ATPases
Vch1786_I1140	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I1142	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I1142	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I1147	SM00020	Trypsin-like serine protease
Vch1786_I1149	SM00448	cheY-homologous receiver domain
Vch1786_I1150	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I1150	SM00421	helix_turn_helix, Lux Regulon
Vch1786_I1150	SM00448	cheY-homologous receiver domain
Vch1786_I1151	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_I1151	SM00073	Histidine Phosphotransfer domain
Vch1786_I1151	SM00387	Histidine kinase-like ATPases
Vch1786_I1151	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I1151	SM00448	cheY-homologous receiver domain
Vch1786_I1151	SM00918	Ligated ion channel L-glutamate- and glycine-binding site
Vch1786_I1153	SM00116	Domain in cystathionine beta-synthase and other proteins.
Vch1786_I1158	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1165	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1170	SM00155	Phospholipase D. Active site motifs.
Vch1786_I1179	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1183	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1184	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1187	SM01131	Vch1786_I1187
Vch1786_I1209	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I1209	SM00091	PAS domain
Vch1786_I1210	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I1212	SM00344	helix_turn_helix ASNC type
Vch1786_I1218	SM00448	cheY-homologous receiver domain
Vch1786_I1218	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I1220	SM00354	helix_turn _helix lactose operon repressor
Vch1786_I1229	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Vch1786_I1229	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Vch1786_I1229	SM00493	Vch1786_I1229
Vch1786_I1234	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I1255	SM00487	DEAD-like helicases superfamily
Vch1786_I1255	SM00490	helicase superfamily c-terminal domain
Vch1786_I1259	SM00487	DEAD-like helicases superfamily
Vch1786_I1270	SM01130	Vch1786_I1270
Vch1786_I1311	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1318	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_I1323	SM00387	Histidine kinase-like ATPases
Vch1786_I1323	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I1323	SM00448	cheY-homologous receiver domain
Vch1786_I1337	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1338	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Vch1786_I1340	SM00840	Vch1786_I1340
Vch1786_I1343	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I1347	SM00491	Vch1786_I1347
Vch1786_I1351	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I1351	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I1355	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_I1355	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Vch1786_I1356	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1360	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I1364	SM00763	PrkA AAA domain
Vch1786_I1370	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1371	SM00849	Metallo-beta-lactamase superfamily
Vch1786_I1374	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1377	SM00487	DEAD-like helicases superfamily
Vch1786_I1377	SM00490	helicase superfamily c-terminal domain
Vch1786_I1377	SM00982	Vch1786_I1377
Vch1786_I1377	SM01058	CarD-like/TRCF domain
Vch1786_I1389	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I1389	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I1391	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Vch1786_I1394	SM00843	Vch1786_I1394
Vch1786_I1395	SM00344	helix_turn_helix ASNC type
Vch1786_I1396	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Vch1786_I1396	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Vch1786_I1402	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Vch1786_I1403	SM00028	Tetratricopeptide repeats
Vch1786_I1405	SM00411	bacterial (prokaryotic) histone like domain
Vch1786_I1406	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I1408	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Vch1786_I1410	SM00411	bacterial (prokaryotic) histone like domain
Vch1786_I1411	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1411	SM00464	Found in ATP-dependent protease La (LON)
Vch1786_I1412	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1412	SM00994	ClpX C4-type zinc finger
Vch1786_I1412	SM01086	C-terminal, D2-small domain, of ClpB protein
Vch1786_I1416	SM00387	Histidine kinase-like ATPases
Vch1786_I1416	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I1417	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1417	SM00448	cheY-homologous receiver domain
Vch1786_I1425	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I1425	SM00267	diguanylate cyclase
Vch1786_I1428	SM00563	Phosphate acyltransferases
Vch1786_I1444	SM00495	Chitin-binding domain type 3
Vch1786_I1444	SM00636	Vch1786_I1444
Vch1786_I1456	SM00978	Vch1786_I1456
Vch1786_I1458	SM00563	Phosphate acyltransferases
Vch1786_I1459	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I1459	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I1460	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I1464	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
Vch1786_I1470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_I1471	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_I1472	SM01144	Vch1786_I1472
Vch1786_I1475	SM00474	3'-5' exonuclease
Vch1786_I1481	SM00487	DEAD-like helicases superfamily
Vch1786_I1481	SM00491	Vch1786_I1481
Vch1786_I1486	SM00870	Vch1786_I1486
Vch1786_I1491	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Vch1786_I1497	SM00260	Two component signalling adaptor domain
Vch1786_I1497	SM00448	cheY-homologous receiver domain
Vch1786_I1511	SM00825	Beta-ketoacyl synthase
Vch1786_I1513	SM00822	Vch1786_I1513
Vch1786_I1514	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Vch1786_I1520	SM00363	S4 RNA-binding domain
Vch1786_I1521	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I1527	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Vch1786_I1529	SM00073	Histidine Phosphotransfer domain
Vch1786_I1536	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Vch1786_I1536	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Vch1786_I1536	SM00493	Vch1786_I1536
Vch1786_I1550	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1552	SM00260	Two component signalling adaptor domain
Vch1786_I1553	SM00260	Two component signalling adaptor domain
Vch1786_I1555	SM00448	cheY-homologous receiver domain
Vch1786_I1556	SM00073	Histidine Phosphotransfer domain
Vch1786_I1556	SM00260	Two component signalling adaptor domain
Vch1786_I1556	SM00387	Histidine kinase-like ATPases
Vch1786_I1556	SM01231	Vch1786_I1556
Vch1786_I1558	SM00448	cheY-homologous receiver domain
Vch1786_I1561	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1561	SM00962	SRP54-type protein, GTPase domain
Vch1786_I1564	SM00855	Phosphoglycerate mutase family
Vch1786_I1567	SM00836	DALR anticodon binding domain
Vch1786_I1567	SM01016	Arginyl tRNA synthetase N terminal dom
Vch1786_I1571	SM00899	Vch1786_I1571
Vch1786_I1573	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_I1575	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1577	SM00881	CoA binding domain
Vch1786_I1580	SM00861	Transketolase, pyrimidine binding domain
Vch1786_I1598	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Vch1786_I1600	SM00825	Beta-ketoacyl synthase
Vch1786_I1609	SM00463	Small MutS-related domain
Vch1786_I1621	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1626	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1626	SM00448	cheY-homologous receiver domain
Vch1786_I1627	SM00091	PAS domain
Vch1786_I1627	SM00387	Histidine kinase-like ATPases
Vch1786_I1627	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I1628	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1646	SM01130	Vch1786_I1646
Vch1786_I1650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I1650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I1653	SM00028	Tetratricopeptide repeats
Vch1786_I1667	SM00937	Vch1786_I1667
Vch1786_I1671	SM01400	Vch1786_I1671
Vch1786_I1685	SM00047	Lysozyme subfamily 2
Vch1786_I1694	SM00138	Methyltransferase, chemotaxis proteins 
Vch1786_I1695	SM00260	Two component signalling adaptor domain
Vch1786_I1695	SM00448	cheY-homologous receiver domain
Vch1786_I1696	SM00858	Vch1786_I1696
Vch1786_I1702	SM00823	Phosphopantetheine attachment site
Vch1786_I1710	SM01081	Putative carbohydrate binding domain
Vch1786_I1716	SM00463	Small MutS-related domain
Vch1786_I1717	SM00363	S4 RNA-binding domain
Vch1786_I1718	SM00267	diguanylate cyclase
Vch1786_I1727	SM00479	Vch1786_I1727
Vch1786_I1730	SM00849	Metallo-beta-lactamase superfamily
Vch1786_I1731	SM00257	Lysin motif
Vch1786_I1733	SM00938	Nitrogen regulatory protein P-II
Vch1786_I1736	SM00977	TilS substrate C-terminal domain
Vch1786_I1738	SM00481	DNA polymerase alpha chain like domain
Vch1786_I1744	SM00935	Outer membrane protein (OmpH-like)
Vch1786_I1746	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Vch1786_I1755	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_I1766	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Vch1786_I1777	SM00267	diguanylate cyclase
Vch1786_I1786	SM00900	Vch1786_I1786
Vch1786_I1796	SM00464	Found in ATP-dependent protease La (LON)
Vch1786_I1805	SM00925	MltA specific insert domain
Vch1786_I1827	SM00354	helix_turn _helix lactose operon repressor
Vch1786_I1828	SM01038	Beta galactosidase small chain
Vch1786_I1832	SM00838	Elongation factor G C-terminus
Vch1786_I1832	SM00889	Elongation factor G, domain IV
Vch1786_I1833	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1839	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
Vch1786_I1840	SM01133	Vch1786_I1840
Vch1786_I1848	SM00986	Uracil DNA glycosylase superfamily
Vch1786_I1848	SM00987	UreE urease accessory protein, C-terminal domain 
Vch1786_I1849	SM00518	AP endonuclease family 2
Vch1786_I1857	SM00448	cheY-homologous receiver domain
Vch1786_I1857	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I1858	SM00073	Histidine Phosphotransfer domain
Vch1786_I1858	SM00091	PAS domain
Vch1786_I1858	SM00387	Histidine kinase-like ATPases
Vch1786_I1858	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I1858	SM00448	cheY-homologous receiver domain
Vch1786_I1859	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Vch1786_I1859	SM00091	PAS domain
Vch1786_I1859	SM00267	diguanylate cyclase
Vch1786_I1860	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I1875	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1876	SM00507	HNH nucleases
Vch1786_I1879	SM00851	MGS-like domain
Vch1786_I1879	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Vch1786_I1880	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
Vch1786_I1885	SM00957	SecA DEAD-like domain
Vch1786_I1885	SM00958	SecA preprotein cross-linking domain
Vch1786_I1888	SM00864	Tubulin/FtsZ family, GTPase domain
Vch1786_I1888	SM00865	Tubulin/FtsZ family, C-terminal domain
Vch1786_I1889	SM00842	Cell division protein FtsA
Vch1786_I1905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Vch1786_I1905	SM00895	Vch1786_I1905
Vch1786_I1911	SM00644	Vch1786_I1911
Vch1786_I1921	SM00434	DNA Topoisomerase IV
Vch1786_I1922	SM00387	Histidine kinase-like ATPases
Vch1786_I1922	SM00433	TopoisomeraseII
Vch1786_I1930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I1930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I1931	SM00880	Vch1786_I1931
Vch1786_I1931	SM01118	Vch1786_I1931
Vch1786_I1935	SM00287	Bacterial SH3 domain homologues
Vch1786_I1937	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I1939	SM01192	Vch1786_I1939
Vch1786_I1939	SM01193	Vch1786_I1939
Vch1786_I1943	SM00954	Region found in RelA / SpoT proteins
Vch1786_I1945	SM00073	Histidine Phosphotransfer domain
Vch1786_I1945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I1945	SM00387	Histidine kinase-like ATPases
Vch1786_I1945	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I1945	SM00448	cheY-homologous receiver domain
Vch1786_I1946	SM00267	diguanylate cyclase
Vch1786_I1953	SM00358	Double-stranded RNA binding motif
Vch1786_I1953	SM00535	Ribonuclease III family
Vch1786_I1977	SM00014	Acid phosphatase homologues
Vch1786_I1979	SM00917	LeuA allosteric (dimerisation) domain
Vch1786_I1980	SM01329	Vch1786_I1980
Vch1786_I1992	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_I2002	SM00487	DEAD-like helicases superfamily
Vch1786_I2002	SM00490	helicase superfamily c-terminal domain
Vch1786_I2004	SM00670	Large family of predicted nucleotide-binding domains
Vch1786_I2009	SM00563	Phosphate acyltransferases
Vch1786_I2016	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2020	SM00116	Domain in cystathionine beta-synthase and other proteins.
Vch1786_I2024	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2030	SM00924	MgtE intracellular N domain
Vch1786_I2033	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2048	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2059	SM00487	DEAD-like helicases superfamily
Vch1786_I2059	SM00490	helicase superfamily c-terminal domain
Vch1786_I2066	SM00662	RNA polymerases D
Vch1786_I2067	SM00363	S4 RNA-binding domain
Vch1786_I2067	SM01390	Vch1786_I2067
Vch1786_I2080	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Vch1786_I2081	SM01374	Vch1786_I2081
Vch1786_I2085	SM00322	K homology RNA-binding domain
Vch1786_I2088	SM01382	Vch1786_I2088
Vch1786_I2088	SM01383	Vch1786_I2088
Vch1786_I2092	SM01403	Vch1786_I2092
Vch1786_I2093	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Vch1786_I2094	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I2094	SM00357	Cold shock protein domain
Vch1786_I2094	SM00955	Vch1786_I2094
Vch1786_I2096	SM00671	Sel1-like repeats.
Vch1786_I2097	SM00788	Adenylosuccinate synthetase
Vch1786_I2103	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2109	SM00100	Cyclic nucleotide-monophosphate binding domain
Vch1786_I2109	SM00419	helix_turn_helix, cAMP Regulatory protein
Vch1786_I2110	SM01150	Vch1786_I2110
Vch1786_I2115	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I2125	SM00965	Secretin and TonB N terminus short domain
Vch1786_I2140	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Vch1786_I2144	SM00971	Serine acetyltransferase, N-terminal
Vch1786_I2147	SM00450	Rhodanese Homology Domain
Vch1786_I2153	SM00841	Elongation factor P, C-terminal
Vch1786_I2153	SM01185	Vch1786_I2153
Vch1786_I2158	SM00883	Chaperonin 10 Kd subunit
Vch1786_I2167	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2167	SM01086	C-terminal, D2-small domain, of ClpB protein
Vch1786_I2170	SM00354	helix_turn _helix lactose operon repressor
Vch1786_I2171	SM00487	DEAD-like helicases superfamily
Vch1786_I2171	SM00490	helicase superfamily c-terminal domain
Vch1786_I2174	SM00919	Malic enzyme, NAD binding domain
Vch1786_I2174	SM01274	Vch1786_I2174
Vch1786_I2186	SM00448	cheY-homologous receiver domain
Vch1786_I2186	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I2187	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I2187	SM00387	Histidine kinase-like ATPases
Vch1786_I2187	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I2191	SM00267	diguanylate cyclase
Vch1786_I2197	SM00421	helix_turn_helix, Lux Regulon
Vch1786_I2197	SM00448	cheY-homologous receiver domain
Vch1786_I2198	SM01091	Transporter associated domain
Vch1786_I2202	SM00072	Guanylate kinase homologues.
Vch1786_I2203	SM01409	Vch1786_I2203
Vch1786_I2204	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_I2204	SM00954	Region found in RelA / SpoT proteins
Vch1786_I2205	SM00487	DEAD-like helicases superfamily
Vch1786_I2205	SM00490	helicase superfamily c-terminal domain
Vch1786_I2207	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I2207	SM00387	Histidine kinase-like ATPases
Vch1786_I2207	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I2208	SM00448	cheY-homologous receiver domain
Vch1786_I2208	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I2210	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I2210	SM00732	Likely ribonuclease with RNase H fold.
Vch1786_I2226	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2229	SM00363	S4 RNA-binding domain
Vch1786_I2240	SM01230	Vch1786_I2240
Vch1786_I2242	SM00091	PAS domain
Vch1786_I2242	SM00387	Histidine kinase-like ATPases
Vch1786_I2242	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I2243	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2243	SM00448	cheY-homologous receiver domain
Vch1786_I2244	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I2244	SM00267	diguanylate cyclase
Vch1786_I2251	SM00360	RNA recognition motif
Vch1786_I2261	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2262	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2262	SM00962	SRP54-type protein, GTPase domain
Vch1786_I2262	SM00963	SRP54-type protein, helical bundle domain
Vch1786_I2278	SM01144	Vch1786_I2278
Vch1786_I2279	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I2279	SM00267	diguanylate cyclase
Vch1786_I2279	SM00897	FIST N domain
Vch1786_I2279	SM01204	Vch1786_I2279
Vch1786_I2285	SM01219	Vch1786_I2285
Vch1786_I2292	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I2299	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Vch1786_I2299	SM00474	3'-5' exonuclease
Vch1786_I2299	SM00475	5'-3' exonuclease
Vch1786_I2299	SM00482	DNA polymerase A domain
Vch1786_I2303	SM01004	Delta-aminolevulinic acid dehydratase
Vch1786_I2307	SM00450	Rhodanese Homology Domain
Vch1786_I2309	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Vch1786_I2309	SM00091	PAS domain
Vch1786_I2309	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I2314	SM00563	Phosphate acyltransferases
Vch1786_I2335	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I2335	SM00091	PAS domain
Vch1786_I2335	SM00267	diguanylate cyclase
Vch1786_I2336	SM00344	helix_turn_helix ASNC type
Vch1786_I2341	SM00876	Biotin and Thiamin Synthesis associated domain
Vch1786_I2360	SM01001	AIR carboxylase
Vch1786_I2365	SM00257	Lysin motif
Vch1786_I2379	SM00563	Phosphate acyltransferases
Vch1786_I2380	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2386	SM00829	Enoylreductase
Vch1786_I2397	SM00387	Histidine kinase-like ATPases
Vch1786_I2397	SM00433	TopoisomeraseII
Vch1786_I2399	SM00480	DNA polymerase III beta subunit
Vch1786_I2400	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2400	SM00760	Bacterial dnaA protein helix-turn-helix domain
Vch1786_I2402	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_I2404	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2410	SM01228	Vch1786_I2410
Vch1786_I2413	SM00470	ParB-like nuclease domain
Vch1786_I2421	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2454	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2460	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_I2475	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_I2478	SM00341	Helicase and RNase D C-terminal
Vch1786_I2478	SM00487	DEAD-like helicases superfamily
Vch1786_I2478	SM00490	helicase superfamily c-terminal domain
Vch1786_I2478	SM00956	Vch1786_I2478
Vch1786_I2481	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2483	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2499	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I2499	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I2499	SM01049	Vch1786_I2499
Vch1786_I2505	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Vch1786_I2505	SM01232	Vch1786_I2505
Vch1786_I2531	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2547	SM00849	Metallo-beta-lactamase superfamily
Vch1786_I2547	SM01027	Beta-Casp domain
Vch1786_I2549	SM00986	Uracil DNA glycosylase superfamily
Vch1786_I2549	SM00987	UreE urease accessory protein, C-terminal domain 
Vch1786_I2556	SM00411	bacterial (prokaryotic) histone like domain
Vch1786_I2558	SM01209	Vch1786_I2558
Vch1786_I2558	SM01210	Vch1786_I2558
Vch1786_I2559	SM00798	AICARFT/IMPCHase bienzyme
Vch1786_I2559	SM00851	MGS-like domain
Vch1786_I2561	SM00422	helix_turn_helix, mercury resistance
Vch1786_I2562	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_I2566	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I2566	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I2566	SM01049	Vch1786_I2566
Vch1786_I2574	SM00354	helix_turn _helix lactose operon repressor
Vch1786_I2580	SM00878	Biotin carboxylase C-terminal domain
Vch1786_I2584	SM00479	Vch1786_I2584
Vch1786_I2587	SM00387	Histidine kinase-like ATPases
Vch1786_I2587	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_I2587	SM00448	cheY-homologous receiver domain
Vch1786_I2589	SM00487	DEAD-like helicases superfamily
Vch1786_I2589	SM00490	helicase superfamily c-terminal domain
Vch1786_I2591	SM00357	Cold shock protein domain
Vch1786_I2591	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2591	SM00959	Rho termination factor, N-terminal domain
Vch1786_I2605	SM00155	Phospholipase D. Active site motifs.
Vch1786_I2616	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Vch1786_I2616	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Vch1786_I2617	SM00649	Ribosomal protein L11/L12
Vch1786_I2622	SM00663	RNA polymerase I subunit A N-terminus
Vch1786_I2634	SM00479	Vch1786_I2634
Vch1786_I2646	SM00257	Lysin motif
Vch1786_I2646	SM00646	Vch1786_I2646
Vch1786_I2647	SM00853	MutL C terminal dimerisation domain
Vch1786_I2647	SM01340	Vch1786_I2647
Vch1786_I2651	SM00244	prohibitin homologues
Vch1786_I2652	SM00244	prohibitin homologues
Vch1786_I2655	SM00320	WD40 repeats
Vch1786_I2664	SM00838	Elongation factor G C-terminus
Vch1786_I2664	SM00889	Elongation factor G, domain IV
Vch1786_I2674	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2675	SM01005	Alanine racemase, C-terminal domain
Vch1786_I2700	SM01018	B12 binding domain
Vch1786_I2706	SM00421	helix_turn_helix, Lux Regulon
Vch1786_I2708	SM00052	Putative diguanylate phosphodiesterase
Vch1786_I2708	SM00267	diguanylate cyclase
Vch1786_I2712	SM00965	Secretin and TonB N terminus short domain
Vch1786_I2714	SM00028	Tetratricopeptide repeats
Vch1786_I2715	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2728	SM00316	Ribosomal protein S1-like RNA-binding domain
Vch1786_I2753	SM00650	Ribosomal RNA adenine dimethylases
Vch1786_I2757	SM00271	DnaJ molecular chaperone homology domain
Vch1786_I2764	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I2764	SM01049	Vch1786_I2764
Vch1786_I2771	SM00478	endonuclease III
Vch1786_I2771	SM00525	Vch1786_I2771
Vch1786_I2776	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_I2779	SM01152	Vch1786_I2779
Vch1786_I2783	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2785	SM00421	helix_turn_helix, Lux Regulon
Vch1786_I2786	SM00363	S4 RNA-binding domain
Vch1786_I2787	SM00732	Likely ribonuclease with RNase H fold.
Vch1786_I2792	SM00731	SprT homologues.
Vch1786_I2795	SM00861	Transketolase, pyrimidine binding domain
Vch1786_I2798	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Vch1786_I2808	SM00420	helix_turn_helix, Deoxyribose operon repressor
Vch1786_I2808	SM01134	Vch1786_I2808
Vch1786_I2811	SM00563	Phosphate acyltransferases
Vch1786_I2817	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_I2818	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_I2818	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_I2823	SM00400	zinc finger
Vch1786_I2823	SM00493	Vch1786_I2823
Vch1786_I2823	SM00766	DNA primase DnaG DnaB-binding
Vch1786_I2829	SM01207	Vch1786_I2829
Vch1786_I2830	SM00905	Dihydroneopterin aldolase
Vch1786_I2839	SM00257	Lysin motif
Vch1786_I2841	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Vch1786_I2841	SM00534	ATPase domain of DNA mismatch repair MUTS family
Vch1786_I2847	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2849	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2851	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Vch1786_I2865	SM00829	Enoylreductase
Vch1786_I2871	SM01091	Transporter associated domain
Vch1786_I2873	SM00382	ATPases associated with a variety of cellular activities
Vch1786_I2873	SM00962	SRP54-type protein, GTPase domain
Vch1786_I2873	SM00963	SRP54-type protein, helical bundle domain
Vch1786_I2878	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Vch1786_I2879	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Vch1786_I2890	SM00749	bacterial OsmY and nodulation domain
Vch1786_I2897	SM00947	Carbonic anhydrase
Vch1786_I2900	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0002	SM00448	cheY-homologous receiver domain
Vch1786_II0002	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_II0003	SM00387	Histidine kinase-like ATPases
Vch1786_II0003	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II0009	SM00422	helix_turn_helix, mercury resistance
Vch1786_II0011	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_II0013	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0013	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0015	SM00936	Penicillin-binding protein 5, C-terminal domain 
Vch1786_II0019	SM01057	Eukaryotic-type carbonic anhydrase
Vch1786_II0020	SM01321	Vch1786_II0020
Vch1786_II0025	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_II0033	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Vch1786_II0049	SM00507	HNH nucleases
Vch1786_II0051	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_II0134	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_II0185	SM01321	Vch1786_II0185
Vch1786_II0209	SM00354	helix_turn _helix lactose operon repressor
Vch1786_II0212	SM00387	Histidine kinase-like ATPases
Vch1786_II0212	SM00448	cheY-homologous receiver domain
Vch1786_II0216	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Vch1786_II0219	SM00890	Domain of unknown function
Vch1786_II0220	SM00387	Histidine kinase-like ATPases
Vch1786_II0220	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II0221	SM00448	cheY-homologous receiver domain
Vch1786_II0221	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_II0225	SM00052	Putative diguanylate phosphodiesterase
Vch1786_II0228	SM00867	YceI-like domain 
Vch1786_II0229	SM00116	Domain in cystathionine beta-synthase and other proteins.
Vch1786_II0237	SM00782	PhnA Zinc-Ribbon
Vch1786_II0244	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_II0244	SM00267	diguanylate cyclase
Vch1786_II0248	SM00267	diguanylate cyclase
Vch1786_II0251	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Vch1786_II0251	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Vch1786_II0253	SM00387	Histidine kinase-like ATPases
Vch1786_II0253	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II0254	SM00448	cheY-homologous receiver domain
Vch1786_II0254	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_II0262	SM00881	CoA binding domain
Vch1786_II0275	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Vch1786_II0285	SM00866	Vch1786_II0285
Vch1786_II0287	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0302	SM00852	Probable molybdopterin binding domain
Vch1786_II0305	SM00450	Rhodanese Homology Domain
Vch1786_II0308	SM00861	Transketolase, pyrimidine binding domain
Vch1786_II0326	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Vch1786_II0328	SM00450	Rhodanese Homology Domain
Vch1786_II0330	SM00563	Phosphate acyltransferases
Vch1786_II0338	SM00354	helix_turn _helix lactose operon repressor
Vch1786_II0339	SM00640	Glycosyl hydrolases family 32
Vch1786_II0342	SM00091	PAS domain
Vch1786_II0342	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0347	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0347	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0355	SM00354	helix_turn _helix lactose operon repressor
Vch1786_II0356	SM00421	helix_turn_helix, Lux Regulon
Vch1786_II0356	SM00448	cheY-homologous receiver domain
Vch1786_II0357	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0357	SM00387	Histidine kinase-like ATPases
Vch1786_II0360	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Vch1786_II0365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_II0366	SM00421	helix_turn_helix, Lux Regulon
Vch1786_II0366	SM00448	cheY-homologous receiver domain
Vch1786_II0367	SM00387	Histidine kinase-like ATPases
Vch1786_II0371	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0375	SM00822	Vch1786_II0375
Vch1786_II0381	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Vch1786_II0381	SM00267	diguanylate cyclase
Vch1786_II0384	SM00495	Chitin-binding domain type 3
Vch1786_II0384	SM00636	Vch1786_II0384
Vch1786_II0388	SM00448	cheY-homologous receiver domain
Vch1786_II0389	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0389	SM00387	Histidine kinase-like ATPases
Vch1786_II0389	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II0394	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0394	SM00387	Histidine kinase-like ATPases
Vch1786_II0394	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II0394	SM00448	cheY-homologous receiver domain
Vch1786_II0396	SM00851	MGS-like domain
Vch1786_II0404	SM00387	Histidine kinase-like ATPases
Vch1786_II0405	SM00989	Vch1786_II0405
Vch1786_II0409	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0421	SM00387	Histidine kinase-like ATPases
Vch1786_II0421	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II0421	SM00448	cheY-homologous receiver domain
Vch1786_II0447	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_II0447	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Vch1786_II0448	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0451	SM00327	von Willebrand factor (vWF) type A domain
Vch1786_II0452	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0457	SM00487	DEAD-like helicases superfamily
Vch1786_II0457	SM00490	helicase superfamily c-terminal domain
Vch1786_II0462	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0462	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0467	SM00796	Allophanate hydrolase subunit 1
Vch1786_II0468	SM00797	Allophanate hydrolase subunit 2
Vch1786_II0470	SM00984	UDP binding domain
Vch1786_II0473	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0476	SM00052	Putative diguanylate phosphodiesterase
Vch1786_II0476	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Vch1786_II0476	SM00267	diguanylate cyclase
Vch1786_II0479	SM00271	DnaJ molecular chaperone homology domain
Vch1786_II0486	SM00857	Resolvase, N terminal domain
Vch1786_II0493	SM00020	Trypsin-like serine protease
Vch1786_II0494	SM00487	DEAD-like helicases superfamily
Vch1786_II0494	SM00490	helicase superfamily c-terminal domain
Vch1786_II0495	SM00357	Cold shock protein domain
Vch1786_II0495	SM00955	Vch1786_II0495
Vch1786_II0508	SM00924	MgtE intracellular N domain
Vch1786_II0509	SM00883	Chaperonin 10 Kd subunit
Vch1786_II0526	SM01266	Vch1786_II0526
Vch1786_II0527	SM01091	Transporter associated domain
Vch1786_II0532	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Vch1786_II0537	SM00267	diguanylate cyclase
Vch1786_II0539	SM00448	cheY-homologous receiver domain
Vch1786_II0539	SM00850	LytTr DNA-binding domain
Vch1786_II0540	SM00387	Histidine kinase-like ATPases
Vch1786_II0544	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0549	SM00642	Alpha-amylase domain
Vch1786_II0552	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Vch1786_II0552	SM00091	PAS domain
Vch1786_II0552	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0559	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Vch1786_II0571	SM00829	Enoylreductase
Vch1786_II0574	SM00421	helix_turn_helix, Lux Regulon
Vch1786_II0580	SM00481	DNA polymerase alpha chain like domain
Vch1786_II0581	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_II0584	SM01350	Vch1786_II0584
Vch1786_II0586	SM00849	Metallo-beta-lactamase superfamily
Vch1786_II0592	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0592	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0595	SM00729	Elongator protein 3, MiaB family, Radical SAM
Vch1786_II0601	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0608	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0608	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0611	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_II0617	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_II0618	SM00357	Cold shock protein domain
Vch1786_II0622	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_II0624	SM00091	PAS domain
Vch1786_II0624	SM00267	diguanylate cyclase
Vch1786_II0625	SM00420	helix_turn_helix, Deoxyribose operon repressor
Vch1786_II0625	SM01134	Vch1786_II0625
Vch1786_II0633	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0636	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
Vch1786_II0639	SM00421	helix_turn_helix, Lux Regulon
Vch1786_II0642	SM00260	Two component signalling adaptor domain
Vch1786_II0642	SM00448	cheY-homologous receiver domain
Vch1786_II0643	SM00347	helix_turn_helix multiple antibiotic resistance protein
Vch1786_II0644	SM00267	diguanylate cyclase
Vch1786_II0646	SM00530	Helix-turn-helix XRE-family like proteins 
Vch1786_II0648	SM00267	diguanylate cyclase
Vch1786_II0648	SM01079	Vch1786_II0648
Vch1786_II0653	SM00267	diguanylate cyclase
Vch1786_II0661	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0661	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0664	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0665	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_II0666	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0676	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0679	SM00487	DEAD-like helicases superfamily
Vch1786_II0679	SM00490	helicase superfamily c-terminal domain
Vch1786_II0684	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0689	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_II0693	SM00347	helix_turn_helix multiple antibiotic resistance protein
Vch1786_II0706	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_II0706	SM01009	AlkA N-terminal domain
Vch1786_II0710	SM01154	Vch1786_II0710
Vch1786_II0713	SM00671	Sel1-like repeats.
Vch1786_II0716	SM00642	Alpha-amylase domain
Vch1786_II0718	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0718	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0721	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0721	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0724	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0726	SM00062	Bacterial periplasmic substrate-binding proteins
Vch1786_II0734	SM00849	Metallo-beta-lactamase superfamily
Vch1786_II0738	SM00450	Rhodanese Homology Domain
Vch1786_II0741	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0741	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0754	SM00344	helix_turn_helix ASNC type
Vch1786_II0755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0760	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_II0763	SM00421	helix_turn_helix, Lux Regulon
Vch1786_II0767	SM00052	Putative diguanylate phosphodiesterase
Vch1786_II0767	SM00267	diguanylate cyclase
Vch1786_II0768	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0770	SM00331	Sigma factor PP2C-like phosphatases
Vch1786_II0770	SM00448	cheY-homologous receiver domain
Vch1786_II0772	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0773	SM00448	cheY-homologous receiver domain
Vch1786_II0775	SM00138	Methyltransferase, chemotaxis proteins 
Vch1786_II0776	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0776	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0777	SM00260	Two component signalling adaptor domain
Vch1786_II0778	SM00260	Two component signalling adaptor domain
Vch1786_II0779	SM00073	Histidine Phosphotransfer domain
Vch1786_II0779	SM00387	Histidine kinase-like ATPases
Vch1786_II0779	SM01231	Vch1786_II0779
Vch1786_II0780	SM00448	cheY-homologous receiver domain
Vch1786_II0785	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0788	SM00387	Histidine kinase-like ATPases
Vch1786_II0788	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II0789	SM00448	cheY-homologous receiver domain
Vch1786_II0789	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_II0790	SM00822	Vch1786_II0790
Vch1786_II0791	SM01236	Vch1786_II0791
Vch1786_II0796	SM00470	ParB-like nuclease domain
Vch1786_II0805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0805	SM01049	Vch1786_II0805
Vch1786_II0808	SM00421	helix_turn_helix, Lux Regulon
Vch1786_II0812	SM00642	Alpha-amylase domain
Vch1786_II0823	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
Vch1786_II0823	SM00495	Chitin-binding domain type 3
Vch1786_II0823	SM00636	Vch1786_II0823
Vch1786_II0827	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0827	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0831	SM00014	Acid phosphatase homologues
Vch1786_II0841	SM00245	tail specific protease
Vch1786_II0845	SM00267	diguanylate cyclase
Vch1786_II0846	SM00028	Tetratricopeptide repeats
Vch1786_II0851	SM00422	helix_turn_helix, mercury resistance
Vch1786_II0853	SM00257	Lysin motif
Vch1786_II0856	SM00487	DEAD-like helicases superfamily
Vch1786_II0856	SM00490	helicase superfamily c-terminal domain
Vch1786_II0863	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0863	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0867	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0868	SM00267	diguanylate cyclase
Vch1786_II0874	SM00052	Putative diguanylate phosphodiesterase
Vch1786_II0874	SM00267	diguanylate cyclase
Vch1786_II0878	SM00422	helix_turn_helix, mercury resistance
Vch1786_II0895	SM00450	Rhodanese Homology Domain
Vch1786_II0896	SM00052	Putative diguanylate phosphodiesterase
Vch1786_II0910	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0910	SM01086	C-terminal, D2-small domain, of ClpB protein
Vch1786_II0911	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0921	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0925	SM00354	helix_turn _helix lactose operon repressor
Vch1786_II0929	SM00100	Cyclic nucleotide-monophosphate binding domain
Vch1786_II0934	SM00495	Chitin-binding domain type 3
Vch1786_II0935	SM00091	PAS domain
Vch1786_II0935	SM00387	Histidine kinase-like ATPases
Vch1786_II0935	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II0936	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0936	SM00448	cheY-homologous receiver domain
Vch1786_II0959	SM00267	diguanylate cyclase
Vch1786_II0960	SM00357	Cold shock protein domain
Vch1786_II0964	SM00028	Tetratricopeptide repeats
Vch1786_II0965	SM00327	von Willebrand factor (vWF) type A domain
Vch1786_II0969	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II0969	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II0977	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Vch1786_II0977	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II0979	SM00357	Cold shock protein domain
Vch1786_II0983	SM00448	cheY-homologous receiver domain
Vch1786_II0991	SM01240	Vch1786_II0991
Vch1786_II0996	SM01321	Vch1786_II0996
Vch1786_II0997	SM00487	DEAD-like helicases superfamily
Vch1786_II0997	SM00490	helicase superfamily c-terminal domain
Vch1786_II1002	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Vch1786_II1003	SM00387	Histidine kinase-like ATPases
Vch1786_II1008	SM00267	diguanylate cyclase
Vch1786_II1011	SM00458	Ricin-type beta-trefoil
Vch1786_II1012	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Vch1786_II1012	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II1015	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
Vch1786_II1022	SM00382	ATPases associated with a variety of cellular activities
Vch1786_II1023	SM00342	helix_turn_helix, arabinose operon control protein
Vch1786_II1029	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Vch1786_II1029	SM00387	Histidine kinase-like ATPases
Vch1786_II1029	SM00388	His Kinase A (phosphoacceptor) domain
Vch1786_II1030	SM00448	cheY-homologous receiver domain
Vch1786_II1030	SM00862	Transcriptional regulatory protein, C terminal
Vch1786_II1033	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Vch1786_II1035	SM01007	Class II Aldolase and Adducin N-terminal domain
Vch1786_II1038	SM00420	helix_turn_helix, Deoxyribose operon repressor
Vch1786_II1038	SM01134	Vch1786_II1038
Vch1786_II1041	SM00642	Alpha-amylase domain
