N900_00030 SM00382 ATPases associated with a variety of cellular activities N900_00040 SM00062 Bacterial periplasmic substrate-binding proteins N900_00045 SM00382 ATPases associated with a variety of cellular activities N900_00045 SM00760 Bacterial dnaA protein helix-turn-helix domain N900_00050 SM00480 DNA polymerase III beta subunit N900_00060 SM00387 Histidine kinase-like ATPases N900_00060 SM00433 TopoisomeraseII N900_00115 SM00829 Enoylreductase N900_00145 SM00382 ATPases associated with a variety of cellular activities N900_00150 SM00563 Phosphate acyltransferases N900_00220 SM00257 Lysin motif N900_00245 SM01001 AIR carboxylase N900_00340 SM00876 Biotin and Thiamin Synthesis associated domain N900_00365 SM00344 helix_turn_helix ASNC type N900_00370 SM00052 Putative diguanylate phosphodiesterase N900_00370 SM00091 PAS domain N900_00370 SM00267 diguanylate cyclase N900_00470 SM00563 Phosphate acyltransferases N900_00490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) N900_00490 SM00091 PAS domain N900_00490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_00505 SM00450 Rhodanese Homology Domain N900_00515 SM01004 Delta-aminolevulinic acid dehydratase N900_00525 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs N900_00525 SM00474 3'-5' exonuclease N900_00525 SM00475 5'-3' exonuclease N900_00525 SM00482 DNA polymerase A domain N900_00555 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_00590 SM01219 N900_00590 N900_00625 SM00052 Putative diguanylate phosphodiesterase N900_00625 SM00267 diguanylate cyclase N900_00625 SM00897 FIST N domain N900_00625 SM01204 N900_00625 N900_00630 SM01144 N900_00630 N900_00700 SM00382 ATPases associated with a variety of cellular activities N900_00700 SM00962 SRP54-type protein, GTPase domain N900_00700 SM00963 SRP54-type protein, helical bundle domain N900_00705 SM00382 ATPases associated with a variety of cellular activities N900_00755 SM00360 RNA recognition motif N900_00790 SM00052 Putative diguanylate phosphodiesterase N900_00790 SM00267 diguanylate cyclase N900_00795 SM00382 ATPases associated with a variety of cellular activities N900_00795 SM00448 cheY-homologous receiver domain N900_00800 SM00091 PAS domain N900_00800 SM00387 Histidine kinase-like ATPases N900_00800 SM00388 His Kinase A (phosphoacceptor) domain N900_00815 SM01230 N900_00815 N900_00865 SM00363 S4 RNA-binding domain N900_00880 SM00382 ATPases associated with a variety of cellular activities N900_00960 SM00316 Ribosomal protein S1-like RNA-binding domain N900_00960 SM00732 Likely ribonuclease with RNase H fold. N900_00970 SM00448 cheY-homologous receiver domain N900_00970 SM00862 Transcriptional regulatory protein, C terminal N900_00975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_00975 SM00387 Histidine kinase-like ATPases N900_00975 SM00388 His Kinase A (phosphoacceptor) domain N900_00985 SM00487 DEAD-like helicases superfamily N900_00985 SM00490 helicase superfamily c-terminal domain N900_00990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_00990 SM00954 Region found in RelA / SpoT proteins N900_00995 SM01409 N900_00995 N900_01000 SM00072 Guanylate kinase homologues. N900_01020 SM01091 Transporter associated domain N900_01025 SM00421 helix_turn_helix, Lux Regulon N900_01025 SM00448 cheY-homologous receiver domain N900_01050 SM00267 diguanylate cyclase N900_01070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_01070 SM00387 Histidine kinase-like ATPases N900_01070 SM00388 His Kinase A (phosphoacceptor) domain N900_01075 SM00448 cheY-homologous receiver domain N900_01075 SM00862 Transcriptional regulatory protein, C terminal N900_01130 SM00919 Malic enzyme, NAD binding domain N900_01130 SM01274 N900_01130 N900_01140 SM00487 DEAD-like helicases superfamily N900_01140 SM00490 helicase superfamily c-terminal domain N900_01145 SM00354 helix_turn _helix lactose operon repressor N900_01160 SM00382 ATPases associated with a variety of cellular activities N900_01160 SM01086 C-terminal, D2-small domain, of ClpB protein N900_01205 SM00883 Chaperonin 10 Kd subunit N900_01225 SM00841 Elongation factor P, C-terminal N900_01225 SM01185 N900_01225 N900_01255 SM00450 Rhodanese Homology Domain N900_01270 SM00971 Serine acetyltransferase, N-terminal N900_01290 SM00859 Semialdehyde dehydrogenase, NAD binding domain N900_01355 SM00965 Secretin and TonB N terminus short domain N900_01405 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_01430 SM01150 N900_01430 N900_01435 SM00100 Cyclic nucleotide-monophosphate binding domain N900_01435 SM00419 helix_turn_helix, cAMP Regulatory protein N900_01460 SM00382 ATPases associated with a variety of cellular activities N900_01490 SM00788 Adenylosuccinate synthetase N900_01495 SM00671 Sel1-like repeats. N900_01505 SM00316 Ribosomal protein S1-like RNA-binding domain N900_01505 SM00357 Cold shock protein domain N900_01505 SM00955 N900_01505 N900_01510 SM00967 RNA 2'-O ribose methyltransferase substrate binding N900_01515 SM01403 N900_01515 N900_01535 SM01382 N900_01535 N900_01535 SM01383 N900_01535 N900_01550 SM00322 K homology RNA-binding domain N900_01570 SM01374 N900_01570 N900_01575 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. N900_01640 SM00363 S4 RNA-binding domain N900_01640 SM01390 N900_01640 N900_01645 SM00662 RNA polymerases D N900_01680 SM00487 DEAD-like helicases superfamily N900_01680 SM00490 helicase superfamily c-terminal domain N900_01730 SM00382 ATPases associated with a variety of cellular activities N900_01800 SM00382 ATPases associated with a variety of cellular activities N900_01815 SM00924 MgtE intracellular N domain N900_01845 SM00382 ATPases associated with a variety of cellular activities N900_01865 SM00116 Domain in cystathionine beta-synthase and other proteins. N900_01875 SM00382 ATPases associated with a variety of cellular activities N900_01910 SM00563 Phosphate acyltransferases N900_01940 SM00670 Large family of predicted nucleotide-binding domains N900_01950 SM00487 DEAD-like helicases superfamily N900_01950 SM00490 helicase superfamily c-terminal domain N900_02000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_02055 SM01329 N900_02055 N900_02060 SM00917 LeuA allosteric (dimerisation) domain N900_02070 SM00014 Acid phosphatase homologues N900_02190 SM00358 Double-stranded RNA binding motif N900_02190 SM00535 Ribonuclease III family N900_02225 SM00267 diguanylate cyclase N900_02230 SM00073 Histidine Phosphotransfer domain N900_02230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_02230 SM00387 Histidine kinase-like ATPases N900_02230 SM00388 His Kinase A (phosphoacceptor) domain N900_02230 SM00448 cheY-homologous receiver domain N900_02240 SM00954 Region found in RelA / SpoT proteins N900_02255 SM01192 N900_02255 N900_02255 SM01193 N900_02255 N900_02265 SM00382 ATPases associated with a variety of cellular activities N900_02275 SM00287 Bacterial SH3 domain homologues N900_02290 SM00880 N900_02290 N900_02290 SM01118 N900_02290 N900_02300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_02300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_02340 SM00387 Histidine kinase-like ATPases N900_02340 SM00433 TopoisomeraseII N900_02345 SM00434 DNA Topoisomerase IV N900_02395 SM00644 N900_02395 N900_02425 SM00345 helix_turn_helix gluconate operon transcriptional repressor N900_02425 SM00895 N900_02425 N900_02505 SM00842 Cell division protein FtsA N900_02510 SM00864 Tubulin/FtsZ family, GTPase domain N900_02510 SM00865 Tubulin/FtsZ family, C-terminal domain N900_02525 SM00957 SecA DEAD-like domain N900_02525 SM00958 SecA preprotein cross-linking domain N900_02545 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain N900_02550 SM00851 MGS-like domain N900_02550 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N900_02565 SM00507 HNH nucleases N900_02570 SM00382 ATPases associated with a variety of cellular activities N900_02635 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_02640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) N900_02640 SM00091 PAS domain N900_02640 SM00267 diguanylate cyclase N900_02645 SM00073 Histidine Phosphotransfer domain N900_02645 SM00091 PAS domain N900_02645 SM00387 Histidine kinase-like ATPases N900_02645 SM00388 His Kinase A (phosphoacceptor) domain N900_02645 SM00448 cheY-homologous receiver domain N900_02650 SM00448 cheY-homologous receiver domain N900_02650 SM00862 Transcriptional regulatory protein, C terminal N900_02690 SM00518 AP endonuclease family 2 N900_02695 SM00986 Uracil DNA glycosylase superfamily N900_02695 SM00987 UreE urease accessory protein, C-terminal domain N900_02730 SM01133 N900_02730 N900_02735 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain N900_02765 SM00382 ATPases associated with a variety of cellular activities N900_02770 SM00838 Elongation factor G C-terminus N900_02770 SM00889 Elongation factor G, domain IV N900_02790 SM01038 Beta galactosidase small chain N900_02795 SM00354 helix_turn _helix lactose operon repressor N900_02890 SM00925 MltA specific insert domain N900_02925 SM00464 Found in ATP-dependent protease La (LON) N900_02975 SM00900 N900_02975 N900_03030 SM00267 diguanylate cyclase N900_03080 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase N900_03135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_03180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. N900_03190 SM00935 Outer membrane protein (OmpH-like) N900_03230 SM00977 TilS substrate C-terminal domain N900_03245 SM00938 Nitrogen regulatory protein P-II N900_03255 SM00257 Lysin motif N900_03260 SM00849 Metallo-beta-lactamase superfamily N900_03275 SM00479 N900_03275 N900_03315 SM00267 diguanylate cyclase N900_03320 SM00363 S4 RNA-binding domain N900_03325 SM00463 Small MutS-related domain N900_03345 SM01081 Putative carbohydrate binding domain N900_03385 SM00823 Phosphopantetheine attachment site N900_03415 SM00858 N900_03415 N900_03420 SM00260 Two component signalling adaptor domain N900_03420 SM00448 cheY-homologous receiver domain N900_03425 SM00138 Methyltransferase, chemotaxis proteins N900_03470 SM00047 Lysozyme subfamily 2 N900_03530 SM01400 N900_03530 N900_03550 SM00937 N900_03550 N900_03610 SM00028 Tetratricopeptide repeats N900_03625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_03625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_03640 SM01130 N900_03640 N900_03725 SM00382 ATPases associated with a variety of cellular activities N900_03730 SM00091 PAS domain N900_03730 SM00387 Histidine kinase-like ATPases N900_03730 SM00388 His Kinase A (phosphoacceptor) domain N900_03735 SM00382 ATPases associated with a variety of cellular activities N900_03735 SM00448 cheY-homologous receiver domain N900_03760 SM00382 ATPases associated with a variety of cellular activities N900_03815 SM00463 Small MutS-related domain N900_03855 SM00825 Beta-ketoacyl synthase N900_03865 SM00859 Semialdehyde dehydrogenase, NAD binding domain N900_03955 SM00861 Transketolase, pyrimidine binding domain N900_03970 SM00881 CoA binding domain N900_03980 SM00382 ATPases associated with a variety of cellular activities N900_03990 SM00342 helix_turn_helix, arabinose operon control protein N900_03995 SM00899 N900_03995 N900_04015 SM00836 DALR anticodon binding domain N900_04015 SM01016 Arginyl tRNA synthetase N terminal dom N900_04030 SM00855 Phosphoglycerate mutase family N900_04040 SM00382 ATPases associated with a variety of cellular activities N900_04040 SM00962 SRP54-type protein, GTPase domain N900_04055 SM00448 cheY-homologous receiver domain N900_04065 SM00073 Histidine Phosphotransfer domain N900_04065 SM00260 Two component signalling adaptor domain N900_04065 SM00387 Histidine kinase-like ATPases N900_04065 SM01231 N900_04065 N900_04070 SM00448 cheY-homologous receiver domain N900_04080 SM00260 Two component signalling adaptor domain N900_04085 SM00260 Two component signalling adaptor domain N900_04095 SM00382 ATPases associated with a variety of cellular activities N900_04165 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain N900_04165 SM00437 Bacterial DNA topoisomerase I DNA-binding domain N900_04165 SM00493 N900_04165 N900_04200 SM00073 Histidine Phosphotransfer domain N900_04210 SM00859 Semialdehyde dehydrogenase, NAD binding domain N900_04235 SM00316 Ribosomal protein S1-like RNA-binding domain N900_04245 SM00363 S4 RNA-binding domain N900_04275 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. N900_04280 SM00822 N900_04280 N900_04290 SM00825 Beta-ketoacyl synthase N900_04360 SM00260 Two component signalling adaptor domain N900_04360 SM00448 cheY-homologous receiver domain N900_04390 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N900_04410 SM00870 N900_04410 N900_04435 SM00487 DEAD-like helicases superfamily N900_04435 SM00491 N900_04435 N900_04465 SM00474 3'-5' exonuclease N900_04480 SM01144 N900_04480 N900_04485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_04490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_04520 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain N900_04535 SM00530 Helix-turn-helix XRE-family like proteins N900_04540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_04540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_04550 SM00563 Phosphate acyltransferases N900_04560 SM00978 N900_04560 N900_04615 SM00495 Chitin-binding domain type 3 N900_04615 SM00636 N900_04615 N900_04685 SM00563 Phosphate acyltransferases N900_04700 SM00052 Putative diguanylate phosphodiesterase N900_04700 SM00267 diguanylate cyclase N900_04735 SM00382 ATPases associated with a variety of cellular activities N900_04735 SM00448 cheY-homologous receiver domain N900_04740 SM00387 Histidine kinase-like ATPases N900_04740 SM00388 His Kinase A (phosphoacceptor) domain N900_04760 SM00382 ATPases associated with a variety of cellular activities N900_04760 SM00994 ClpX C4-type zinc finger N900_04760 SM01086 C-terminal, D2-small domain, of ClpB protein N900_04765 SM00382 ATPases associated with a variety of cellular activities N900_04765 SM00464 Found in ATP-dependent protease La (LON) N900_04770 SM00411 bacterial (prokaryotic) histone like domain N900_04780 SM00278 Helix-hairpin-helix DNA-binding motif class 1 N900_04790 SM00316 Ribosomal protein S1-like RNA-binding domain N900_04795 SM00411 bacterial (prokaryotic) histone like domain N900_04805 SM00028 Tetratricopeptide repeats N900_04810 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family N900_04840 SM01002 Alanine dehydrogenase/PNT, C-terminal domain N900_04840 SM01003 Alanine dehydrogenase/PNT, N-terminal domain N900_04845 SM00344 helix_turn_helix ASNC type N900_04850 SM00843 N900_04850 N900_04865 SM00345 helix_turn_helix gluconate operon transcriptional repressor N900_04875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_04875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_04930 SM00487 DEAD-like helicases superfamily N900_04930 SM00490 helicase superfamily c-terminal domain N900_04930 SM00982 N900_04930 N900_04930 SM01058 CarD-like/TRCF domain N900_04945 SM00382 ATPases associated with a variety of cellular activities N900_04960 SM00849 Metallo-beta-lactamase superfamily N900_04965 SM00382 ATPases associated with a variety of cellular activities N900_04995 SM00763 PrkA AAA domain N900_05015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_05035 SM00382 ATPases associated with a variety of cellular activities N900_05040 SM00062 Bacterial periplasmic substrate-binding proteins N900_05040 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. N900_05060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_05060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_05080 SM00491 N900_05080 N900_05100 SM00052 Putative diguanylate phosphodiesterase N900_05115 SM00840 N900_05115 N900_05125 SM00278 Helix-hairpin-helix DNA-binding motif class 1 N900_05130 SM00382 ATPases associated with a variety of cellular activities N900_05200 SM00387 Histidine kinase-like ATPases N900_05200 SM00388 His Kinase A (phosphoacceptor) domain N900_05200 SM00448 cheY-homologous receiver domain N900_05220 SM00342 helix_turn_helix, arabinose operon control protein N900_05255 SM00382 ATPases associated with a variety of cellular activities N900_05455 SM01130 N900_05455 N900_05510 SM00487 DEAD-like helicases superfamily N900_05530 SM00487 DEAD-like helicases superfamily N900_05530 SM00490 helicase superfamily c-terminal domain N900_05630 SM00316 Ribosomal protein S1-like RNA-binding domain N900_05660 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain N900_05660 SM00437 Bacterial DNA topoisomerase I DNA-binding domain N900_05660 SM00493 N900_05660 N900_05700 SM00354 helix_turn _helix lactose operon repressor N900_05710 SM00448 cheY-homologous receiver domain N900_05710 SM00862 Transcriptional regulatory protein, C terminal N900_05740 SM00344 helix_turn_helix ASNC type N900_05750 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_05755 SM00052 Putative diguanylate phosphodiesterase N900_05755 SM00091 PAS domain N900_05865 SM01131 N900_05865 N900_05880 SM00382 ATPases associated with a variety of cellular activities N900_05885 SM00382 ATPases associated with a variety of cellular activities N900_05905 SM00382 ATPases associated with a variety of cellular activities N900_05950 SM00155 Phospholipase D. Active site motifs. N900_05970 SM00382 ATPases associated with a variety of cellular activities N900_06005 SM00382 ATPases associated with a variety of cellular activities N900_06030 SM00116 Domain in cystathionine beta-synthase and other proteins. N900_06035 SM00062 Bacterial periplasmic substrate-binding proteins N900_06035 SM00073 Histidine Phosphotransfer domain N900_06035 SM00387 Histidine kinase-like ATPases N900_06035 SM00388 His Kinase A (phosphoacceptor) domain N900_06035 SM00448 cheY-homologous receiver domain N900_06035 SM00918 Ligated ion channel L-glutamate- and glycine-binding site N900_06040 SM00052 Putative diguanylate phosphodiesterase N900_06040 SM00421 helix_turn_helix, Lux Regulon N900_06040 SM00448 cheY-homologous receiver domain N900_06045 SM00448 cheY-homologous receiver domain N900_06055 SM00020 Trypsin-like serine protease N900_06080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_06080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_06095 SM00052 Putative diguanylate phosphodiesterase N900_06105 SM00387 Histidine kinase-like ATPases N900_06110 SM00448 cheY-homologous receiver domain N900_06110 SM00862 Transcriptional regulatory protein, C terminal N900_06120 SM00487 DEAD-like helicases superfamily N900_06120 SM00490 helicase superfamily c-terminal domain N900_06125 SM00363 S4 RNA-binding domain N900_06150 SM00382 ATPases associated with a variety of cellular activities N900_06235 SM00028 Tetratricopeptide repeats N900_06235 SM00386 HAT (Half-A-TPR) repeats N900_06275 SM00387 Histidine kinase-like ATPases N900_06280 SM00448 cheY-homologous receiver domain N900_06290 SM00260 Two component signalling adaptor domain N900_06290 SM00448 cheY-homologous receiver domain N900_06305 SM00267 diguanylate cyclase N900_06350 SM00267 diguanylate cyclase N900_06355 SM00052 Putative diguanylate phosphodiesterase N900_06360 SM00822 N900_06360 N900_06390 SM01060 N900_06390 N900_06395 SM00248 ankyrin repeats N900_06435 SM01022 N900_06435 N900_06470 SM00382 ATPases associated with a variety of cellular activities N900_06495 SM00849 Metallo-beta-lactamase superfamily N900_06515 SM00354 helix_turn _helix lactose operon repressor N900_06535 SM00420 helix_turn_helix, Deoxyribose operon repressor N900_06535 SM01134 N900_06535 N900_06540 SM00382 ATPases associated with a variety of cellular activities N900_06625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_06635 SM01144 N900_06635 N900_06665 SM00852 Probable molybdopterin binding domain N900_06675 SM00382 ATPases associated with a variety of cellular activities N900_06690 SM00382 ATPases associated with a variety of cellular activities N900_06690 SM00448 cheY-homologous receiver domain N900_06695 SM00387 Histidine kinase-like ATPases N900_06695 SM00388 His Kinase A (phosphoacceptor) domain N900_06700 SM00382 ATPases associated with a variety of cellular activities N900_06735 SM00926 Molybdopterin oxidoreductase Fe4S4 domain N900_06780 SM00316 Ribosomal protein S1-like RNA-binding domain N900_06800 SM00382 ATPases associated with a variety of cellular activities N900_06810 SM00945 ProQ/FINO family N900_06815 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. N900_06815 SM00245 tail specific protease N900_06850 SM00981 N900_06850 N900_06860 SM00382 ATPases associated with a variety of cellular activities N900_06980 SM00530 Helix-turn-helix XRE-family like proteins N900_07000 SM00530 Helix-turn-helix XRE-family like proteins N900_07065 SM00382 ATPases associated with a variety of cellular activities N900_07075 SM00382 ATPases associated with a variety of cellular activities N900_07080 SM00387 Histidine kinase-like ATPases N900_07080 SM00388 His Kinase A (phosphoacceptor) domain N900_07080 SM00448 cheY-homologous receiver domain N900_07085 SM00897 FIST N domain N900_07085 SM01204 N900_07085 N900_07135 SM00100 Cyclic nucleotide-monophosphate binding domain N900_07135 SM00419 helix_turn_helix, cAMP Regulatory protein N900_07165 SM00382 ATPases associated with a variety of cellular activities N900_07245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_07270 SM00487 DEAD-like helicases superfamily N900_07270 SM00490 helicase superfamily c-terminal domain N900_07275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) N900_07275 SM00091 PAS domain N900_07275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_07285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07290 SM00260 Two component signalling adaptor domain N900_07295 SM00448 cheY-homologous receiver domain N900_07305 SM00138 Methyltransferase, chemotaxis proteins N900_07310 SM00448 cheY-homologous receiver domain N900_07315 SM00073 Histidine Phosphotransfer domain N900_07315 SM00260 Two component signalling adaptor domain N900_07315 SM00387 Histidine kinase-like ATPases N900_07315 SM01231 N900_07315 N900_07325 SM00448 cheY-homologous receiver domain N900_07330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07370 SM00382 ATPases associated with a variety of cellular activities N900_07370 SM00487 DEAD-like helicases superfamily N900_07370 SM00490 helicase superfamily c-terminal domain N900_07370 SM00847 Helicase associated domain (HA2) Add an annotation N900_07385 SM00479 N900_07385 N900_07390 SM00267 diguanylate cyclase N900_07390 SM01079 N900_07390 N900_07410 SM00267 diguanylate cyclase N900_07420 SM00267 diguanylate cyclase N900_07435 SM00028 Tetratricopeptide repeats N900_07435 SM00267 diguanylate cyclase N900_07460 SM00062 Bacterial periplasmic substrate-binding proteins N900_07475 SM00382 ATPases associated with a variety of cellular activities N900_07495 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase N900_07500 SM00267 diguanylate cyclase N900_07510 SM00073 Histidine Phosphotransfer domain N900_07510 SM00091 PAS domain N900_07510 SM00387 Histidine kinase-like ATPases N900_07510 SM00388 His Kinase A (phosphoacceptor) domain N900_07510 SM00448 cheY-homologous receiver domain N900_07515 SM00448 cheY-homologous receiver domain N900_07515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_07585 SM00345 helix_turn_helix gluconate operon transcriptional repressor N900_07585 SM00895 N900_07585 N900_07620 SM00382 ATPases associated with a variety of cellular activities N900_07645 SM00448 cheY-homologous receiver domain N900_07645 SM00862 Transcriptional regulatory protein, C terminal N900_07650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_07650 SM00387 Histidine kinase-like ATPases N900_07650 SM00388 His Kinase A (phosphoacceptor) domain N900_07665 SM00448 cheY-homologous receiver domain N900_07670 SM00387 Histidine kinase-like ATPases N900_07680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_07685 SM01005 Alanine racemase, C-terminal domain N900_07705 SM00091 PAS domain N900_07705 SM00382 ATPases associated with a variety of cellular activities N900_07755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_07770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_07770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_07785 SM00100 Cyclic nucleotide-monophosphate binding domain N900_07785 SM00116 Domain in cystathionine beta-synthase and other proteins. N900_07790 SM00479 N900_07790 N900_07795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_07810 SM00354 helix_turn _helix lactose operon repressor N900_07840 SM00495 Chitin-binding domain type 3 N900_07850 SM00347 helix_turn_helix multiple antibiotic resistance protein N900_07855 SM00421 helix_turn_helix, Lux Regulon N900_07855 SM00448 cheY-homologous receiver domain N900_07860 SM00387 Histidine kinase-like ATPases N900_07860 SM01049 N900_07860 N900_07890 SM00849 Metallo-beta-lactamase superfamily N900_07940 SM00342 helix_turn_helix, arabinose operon control protein N900_07945 SM00450 Rhodanese Homology Domain N900_07950 SM00434 DNA Topoisomerase IV N900_07980 SM00852 Probable molybdopterin binding domain N900_07995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_07995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_07995 SM01049 N900_07995 N900_08010 SM00382 ATPases associated with a variety of cellular activities N900_08025 SM00855 Phosphoglycerate mutase family N900_08105 SM00411 bacterial (prokaryotic) histone like domain N900_08110 SM00873 B3/4 domain N900_08110 SM00874 tRNA synthetase B5 domain N900_08110 SM00896 Ferredoxin-fold anticodon binding domain N900_08125 SM00267 diguanylate cyclase N900_08155 SM00278 Helix-hairpin-helix DNA-binding motif class 1 N900_08155 SM00465 GIY-YIG type nucleases (URI domain) N900_08160 SM00421 helix_turn_helix, Lux Regulon N900_08160 SM00448 cheY-homologous receiver domain N900_08165 SM00486 DNA polymerase type-B family N900_08170 SM00052 Putative diguanylate phosphodiesterase N900_08180 SM00841 Elongation factor P, C-terminal N900_08180 SM01185 N900_08180 N900_08195 SM00345 helix_turn_helix gluconate operon transcriptional repressor N900_08195 SM00866 N900_08195 N900_08225 SM00020 Trypsin-like serine protease N900_08255 SM00271 DnaJ molecular chaperone homology domain N900_08255 SM00671 Sel1-like repeats. N900_08280 SM00919 Malic enzyme, NAD binding domain N900_08280 SM01274 N900_08280 N900_08315 SM00382 ATPases associated with a variety of cellular activities N900_08320 SM00382 ATPases associated with a variety of cellular activities N900_08325 SM00363 S4 RNA-binding domain N900_08335 SM00481 DNA polymerase alpha chain like domain N900_08430 SM00387 Histidine kinase-like ATPases N900_08435 SM00448 cheY-homologous receiver domain N900_08490 SM00382 ATPases associated with a variety of cellular activities N900_08490 SM01086 C-terminal, D2-small domain, of ClpB protein N900_08500 SM00357 Cold shock protein domain N900_08560 SM00528 Domain in histone-like proteins of HNS family N900_08650 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_08650 SM00876 Biotin and Thiamin Synthesis associated domain N900_08665 SM00382 ATPases associated with a variety of cellular activities N900_08685 SM00267 diguanylate cyclase N900_08690 SM00382 ATPases associated with a variety of cellular activities N900_08730 SM00382 ATPases associated with a variety of cellular activities N900_08735 SM00382 ATPases associated with a variety of cellular activities N900_08760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_08760 SM00387 Histidine kinase-like ATPases N900_08765 SM00448 cheY-homologous receiver domain N900_08770 SM00052 Putative diguanylate phosphodiesterase N900_08770 SM00448 cheY-homologous receiver domain N900_08775 SM00387 Histidine kinase-like ATPases N900_08780 SM00387 Histidine kinase-like ATPases N900_08780 SM00388 His Kinase A (phosphoacceptor) domain N900_08790 SM00448 cheY-homologous receiver domain N900_08795 SM00448 cheY-homologous receiver domain N900_08820 SM00342 helix_turn_helix, arabinose operon control protein N900_08835 SM00495 Chitin-binding domain type 3 N900_08835 SM00636 N900_08835 N900_08850 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N900_08855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor N900_08860 SM00062 Bacterial periplasmic substrate-binding proteins N900_08860 SM00267 diguanylate cyclase N900_08885 SM00344 helix_turn_helix ASNC type N900_08915 SM00493 N900_08915 N900_08925 SM00382 ATPases associated with a variety of cellular activities N900_08945 SM00448 cheY-homologous receiver domain N900_09000 SM00226 Low molecular weight phosphatase family N900_09050 SM00116 Domain in cystathionine beta-synthase and other proteins. N900_09055 SM00267 diguanylate cyclase N900_09075 SM00852 Probable molybdopterin binding domain N900_09080 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_09095 SM00382 ATPases associated with a variety of cellular activities N900_09095 SM00448 cheY-homologous receiver domain N900_09105 SM00487 DEAD-like helicases superfamily N900_09105 SM00490 helicase superfamily c-terminal domain N900_09140 SM00900 N900_09140 N900_09150 SM00478 endonuclease III N900_09150 SM00525 N900_09150 N900_09175 SM00479 N900_09175 N900_09255 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. N900_09255 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. N900_09275 SM00387 Histidine kinase-like ATPases N900_09280 SM00862 Transcriptional regulatory protein, C terminal N900_09320 SM00244 prohibitin homologues N900_09330 SM00422 helix_turn_helix, mercury resistance N900_09345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 N900_09345 SM00292 breast cancer carboxy-terminal domain N900_09345 SM00532 Ligase N family N900_09350 SM00771 ZipA, C-terminal domain (FtsZ-binding) N900_09385 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_09400 SM00116 Domain in cystathionine beta-synthase and other proteins. N900_09400 SM01091 Transporter associated domain N900_09455 SM00936 Penicillin-binding protein 5, C-terminal domain N900_09470 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_09535 SM00710 Parallel beta-helix repeats N900_09590 SM00984 UDP binding domain N900_09600 SM00226 Low molecular weight phosphatase family N900_09630 SM00642 Alpha-amylase domain N900_09640 SM00354 helix_turn _helix lactose operon repressor N900_09650 SM00382 ATPases associated with a variety of cellular activities N900_09650 SM00930 N900_09650 N900_09680 SM00028 Tetratricopeptide repeats N900_09685 SM00267 diguanylate cyclase N900_09695 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs N900_09695 SM00475 5'-3' exonuclease N900_09715 SM00981 N900_09715 N900_09740 SM00861 Transketolase, pyrimidine binding domain N900_09820 SM01321 N900_09820 N900_09825 SM01211 N900_09825 N900_09835 SM00062 Bacterial periplasmic substrate-binding proteins N900_09880 SM00271 DnaJ molecular chaperone homology domain N900_09935 SM01276 N900_09935 N900_09965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_09965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_10040 SM00862 Transcriptional regulatory protein, C terminal N900_10045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_10060 SM00247 Beta/gamma crystallins N900_10095 SM00530 Helix-turn-helix XRE-family like proteins N900_10105 SM00487 DEAD-like helicases superfamily N900_10105 SM00490 helicase superfamily c-terminal domain N900_10175 SM00764 Citrate lyase ligase C-terminal domain N900_10200 SM00091 PAS domain N900_10200 SM00387 Histidine kinase-like ATPases N900_10205 SM00448 cheY-homologous receiver domain N900_10235 SM00849 Metallo-beta-lactamase superfamily N900_10250 SM00382 ATPases associated with a variety of cellular activities N900_10300 SM00495 Chitin-binding domain type 3 N900_10315 SM00116 Domain in cystathionine beta-synthase and other proteins. N900_10315 SM01240 N900_10315 N900_10335 SM00382 ATPases associated with a variety of cellular activities N900_10340 SM00564 beta-propeller repeat N900_10360 SM00530 Helix-turn-helix XRE-family like proteins N900_10370 SM00562 N900_10370 N900_10395 SM00271 DnaJ molecular chaperone homology domain N900_10440 SM01323 N900_10440 N900_10455 SM00116 Domain in cystathionine beta-synthase and other proteins. N900_10495 SM00382 ATPases associated with a variety of cellular activities N900_10525 SM00091 PAS domain N900_10525 SM00387 Histidine kinase-like ATPases N900_10525 SM00388 His Kinase A (phosphoacceptor) domain N900_10530 SM00448 cheY-homologous receiver domain N900_10530 SM00862 Transcriptional regulatory protein, C terminal N900_10585 SM00382 ATPases associated with a variety of cellular activities N900_10585 SM01086 C-terminal, D2-small domain, of ClpB protein N900_10595 SM00363 S4 RNA-binding domain N900_10610 SM00830 Chorismate mutase type II N900_10620 SM00052 Putative diguanylate phosphodiesterase N900_10620 SM00267 diguanylate cyclase N900_10640 SM00382 ATPases associated with a variety of cellular activities N900_10650 SM00830 Chorismate mutase type II N900_10665 SM00448 cheY-homologous receiver domain N900_10665 SM00850 LytTr DNA-binding domain N900_10720 SM00904 Riboflavin kinase N900_10735 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor N900_10765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. N900_10780 SM00927 DNA mismatch repair enzyme MutH N900_10795 SM00382 ATPases associated with a variety of cellular activities N900_10820 SM00487 DEAD-like helicases superfamily N900_10820 SM00490 helicase superfamily c-terminal domain N900_10830 SM00530 Helix-turn-helix XRE-family like proteins N900_10900 SM00530 Helix-turn-helix XRE-family like proteins N900_10910 SM00342 helix_turn_helix, arabinose operon control protein N900_10925 SM00778 Zinc-binding domain of primase-helicase N900_10940 SM00327 von Willebrand factor (vWF) type A domain N900_10960 SM00382 ATPases associated with a variety of cellular activities N900_11010 SM00382 ATPases associated with a variety of cellular activities N900_11120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_11175 SM00479 N900_11175 N900_11305 SM00052 Putative diguanylate phosphodiesterase N900_11305 SM00267 diguanylate cyclase N900_11330 SM00052 Putative diguanylate phosphodiesterase N900_11330 SM00091 PAS domain N900_11330 SM00267 diguanylate cyclase N900_11350 SM00347 helix_turn_helix multiple antibiotic resistance protein N900_11355 SM00028 Tetratricopeptide repeats N900_11360 SM00316 Ribosomal protein S1-like RNA-binding domain N900_11360 SM00322 K homology RNA-binding domain N900_11365 SM01387 N900_11365 N900_11385 SM00316 Ribosomal protein S1-like RNA-binding domain N900_11385 SM00322 K homology RNA-binding domain N900_11420 SM00382 ATPases associated with a variety of cellular activities N900_11430 SM01103 N900_11430 N900_11450 SM00363 S4 RNA-binding domain N900_11495 SM00091 PAS domain N900_11495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_11495 SM00387 Histidine kinase-like ATPases N900_11495 SM00388 His Kinase A (phosphoacceptor) domain N900_11495 SM00448 cheY-homologous receiver domain N900_11515 SM00382 ATPases associated with a variety of cellular activities N900_11520 SM00382 ATPases associated with a variety of cellular activities N900_11540 SM01068 Putative carbohydrate binding domain N900_11550 SM00382 ATPases associated with a variety of cellular activities N900_11570 SM00938 Nitrogen regulatory protein P-II N900_11595 SM00487 DEAD-like helicases superfamily N900_11595 SM00490 helicase superfamily c-terminal domain N900_11595 SM00847 Helicase associated domain (HA2) Add an annotation N900_11645 SM00382 ATPases associated with a variety of cellular activities N900_11660 SM00947 Carbonic anhydrase N900_11695 SM00749 bacterial OsmY and nodulation domain N900_11745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. N900_11750 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. N900_11775 SM00382 ATPases associated with a variety of cellular activities N900_11775 SM00962 SRP54-type protein, GTPase domain N900_11775 SM00963 SRP54-type protein, helical bundle domain N900_11785 SM01091 Transporter associated domain N900_11810 SM00829 Enoylreductase N900_11885 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain N900_11895 SM00382 ATPases associated with a variety of cellular activities N900_11905 SM00382 ATPases associated with a variety of cellular activities N900_11930 SM00533 DNA-binding domain of DNA mismatch repair MUTS family N900_11930 SM00534 ATPase domain of DNA mismatch repair MUTS family N900_11940 SM00257 Lysin motif N900_11985 SM00905 Dihydroneopterin aldolase N900_11990 SM01207 N900_11990 N900_12015 SM00400 zinc finger N900_12015 SM00493 N900_12015 N900_12015 SM00766 DNA primase DnaG DnaB-binding N900_12040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_12040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_12090 SM00563 Phosphate acyltransferases N900_12105 SM00420 helix_turn_helix, Deoxyribose operon repressor N900_12105 SM01134 N900_12105 N900_12155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N900_12185 SM00731 SprT homologues. N900_12210 SM00732 Likely ribonuclease with RNase H fold. N900_12215 SM00363 S4 RNA-binding domain N900_12220 SM00421 helix_turn_helix, Lux Regulon N900_12230 SM00382 ATPases associated with a variety of cellular activities N900_12250 SM01152 N900_12250 N900_12265 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_12280 SM00478 endonuclease III N900_12280 SM00525 N900_12280 N900_12315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_12315 SM01049 N900_12315 N900_12335 SM00271 DnaJ molecular chaperone homology domain N900_12355 SM00650 Ribosomal RNA adenine dimethylases N900_12470 SM00316 Ribosomal protein S1-like RNA-binding domain N900_12540 SM00382 ATPases associated with a variety of cellular activities N900_12545 SM00028 Tetratricopeptide repeats N900_12555 SM00965 Secretin and TonB N terminus short domain N900_12575 SM00052 Putative diguanylate phosphodiesterase N900_12575 SM00267 diguanylate cyclase N900_12585 SM00421 helix_turn_helix, Lux Regulon N900_12615 SM01018 B12 binding domain N900_12715 SM01005 Alanine racemase, C-terminal domain N900_12720 SM00382 ATPases associated with a variety of cellular activities N900_12765 SM00838 Elongation factor G C-terminus N900_12765 SM00889 Elongation factor G, domain IV N900_12805 SM00320 WD40 repeats N900_12820 SM00244 prohibitin homologues N900_12825 SM00244 prohibitin homologues N900_12845 SM00853 MutL C terminal dimerisation domain N900_12845 SM01340 N900_12845 N900_12850 SM00257 Lysin motif N900_12850 SM00646 N900_12850 N900_12910 SM00479 N900_12910 N900_12970 SM00663 RNA polymerase I subunit A N-terminus N900_12995 SM00649 Ribosomal protein L11/L12 N900_13000 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. N900_13000 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. N900_13055 SM00155 Phospholipase D. Active site motifs. N900_13110 SM00357 Cold shock protein domain N900_13110 SM00382 ATPases associated with a variety of cellular activities N900_13110 SM00959 Rho termination factor, N-terminal domain N900_13120 SM00487 DEAD-like helicases superfamily N900_13120 SM00490 helicase superfamily c-terminal domain N900_13130 SM00387 Histidine kinase-like ATPases N900_13130 SM00388 His Kinase A (phosphoacceptor) domain N900_13130 SM00448 cheY-homologous receiver domain N900_13145 SM00479 N900_13145 N900_13165 SM00878 Biotin carboxylase C-terminal domain N900_13185 SM00354 helix_turn _helix lactose operon repressor N900_13225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_13225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_13225 SM01049 N900_13225 N900_13240 SM00862 Transcriptional regulatory protein, C terminal N900_13245 SM00422 helix_turn_helix, mercury resistance N900_13250 SM00798 AICARFT/IMPCHase bienzyme N900_13250 SM00851 MGS-like domain N900_13255 SM01209 N900_13255 N900_13255 SM01210 N900_13255 N900_13265 SM00411 bacterial (prokaryotic) histone like domain N900_13295 SM00986 Uracil DNA glycosylase superfamily N900_13295 SM00987 UreE urease accessory protein, C-terminal domain N900_13305 SM00849 Metallo-beta-lactamase superfamily N900_13305 SM01027 Beta-Casp domain N900_13370 SM00382 ATPases associated with a variety of cellular activities N900_13495 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain N900_13495 SM01232 N900_13495 N900_13520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_13520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_13520 SM01049 N900_13520 N900_13590 SM00382 ATPases associated with a variety of cellular activities N900_13600 SM00382 ATPases associated with a variety of cellular activities N900_13615 SM00341 Helicase and RNase D C-terminal N900_13615 SM00487 DEAD-like helicases superfamily N900_13615 SM00490 helicase superfamily c-terminal domain N900_13615 SM00956 N900_13615 N900_13630 SM00342 helix_turn_helix, arabinose operon control protein N900_13710 SM00530 Helix-turn-helix XRE-family like proteins N900_13745 SM00382 ATPases associated with a variety of cellular activities N900_13905 SM00382 ATPases associated with a variety of cellular activities N900_13945 SM00470 ParB-like nuclease domain N900_13960 SM01228 N900_13960 N900_13995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_13995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_13995 SM01049 N900_13995 N900_14005 SM00421 helix_turn_helix, Lux Regulon N900_14020 SM00642 Alpha-amylase domain N900_14075 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins N900_14075 SM00495 Chitin-binding domain type 3 N900_14075 SM00636 N900_14075 N900_14095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_14095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_14115 SM00014 Acid phosphatase homologues N900_14160 SM00245 tail specific protease N900_14175 SM00267 diguanylate cyclase N900_14180 SM00028 Tetratricopeptide repeats N900_14200 SM00422 helix_turn_helix, mercury resistance N900_14210 SM00257 Lysin motif N900_14220 SM00487 DEAD-like helicases superfamily N900_14220 SM00490 helicase superfamily c-terminal domain N900_14250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_14250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_14270 SM00382 ATPases associated with a variety of cellular activities N900_14275 SM00267 diguanylate cyclase N900_14305 SM00052 Putative diguanylate phosphodiesterase N900_14305 SM00267 diguanylate cyclase N900_14320 SM00422 helix_turn_helix, mercury resistance N900_14395 SM00450 Rhodanese Homology Domain N900_14400 SM00052 Putative diguanylate phosphodiesterase N900_14475 SM00382 ATPases associated with a variety of cellular activities N900_14475 SM01086 C-terminal, D2-small domain, of ClpB protein N900_14480 SM00382 ATPases associated with a variety of cellular activities N900_14525 SM00382 ATPases associated with a variety of cellular activities N900_14545 SM00354 helix_turn _helix lactose operon repressor N900_14565 SM00100 Cyclic nucleotide-monophosphate binding domain N900_14585 SM00495 Chitin-binding domain type 3 N900_14590 SM00091 PAS domain N900_14590 SM00387 Histidine kinase-like ATPases N900_14590 SM00388 His Kinase A (phosphoacceptor) domain N900_14595 SM00382 ATPases associated with a variety of cellular activities N900_14595 SM00448 cheY-homologous receiver domain N900_14700 SM00267 diguanylate cyclase N900_14705 SM00357 Cold shock protein domain N900_14720 SM00028 Tetratricopeptide repeats N900_14725 SM00327 von Willebrand factor (vWF) type A domain N900_14745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_14745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_14775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. N900_14775 SM00382 ATPases associated with a variety of cellular activities N900_14785 SM00357 Cold shock protein domain N900_14805 SM00448 cheY-homologous receiver domain N900_14840 SM01240 N900_14840 N900_14865 SM01321 N900_14865 N900_14870 SM00487 DEAD-like helicases superfamily N900_14870 SM00490 helicase superfamily c-terminal domain N900_14890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_14895 SM00387 Histidine kinase-like ATPases N900_14920 SM00267 diguanylate cyclase N900_14930 SM00458 Ricin-type beta-trefoil N900_14935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_14935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_14950 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins N900_14980 SM00382 ATPases associated with a variety of cellular activities N900_14985 SM00342 helix_turn_helix, arabinose operon control protein N900_15015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_15015 SM00387 Histidine kinase-like ATPases N900_15015 SM00388 His Kinase A (phosphoacceptor) domain N900_15020 SM00448 cheY-homologous receiver domain N900_15020 SM00862 Transcriptional regulatory protein, C terminal N900_15040 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family N900_15050 SM01007 Class II Aldolase and Adducin N-terminal domain N900_15065 SM00420 helix_turn_helix, Deoxyribose operon repressor N900_15065 SM01134 N900_15065 N900_15080 SM00642 Alpha-amylase domain N900_15105 SM00448 cheY-homologous receiver domain N900_15105 SM00862 Transcriptional regulatory protein, C terminal N900_15110 SM00387 Histidine kinase-like ATPases N900_15110 SM00388 His Kinase A (phosphoacceptor) domain N900_15140 SM00422 helix_turn_helix, mercury resistance N900_15150 SM00342 helix_turn_helix, arabinose operon control protein N900_15160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_15160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_15170 SM00936 Penicillin-binding protein 5, C-terminal domain N900_15185 SM01057 Eukaryotic-type carbonic anhydrase N900_15190 SM01321 N900_15190 N900_15210 SM00530 Helix-turn-helix XRE-family like proteins N900_15250 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain N900_15330 SM00507 HNH nucleases N900_15335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_15725 SM00530 Helix-turn-helix XRE-family like proteins N900_16005 SM01321 N900_16005 N900_16125 SM00354 helix_turn _helix lactose operon repressor N900_16140 SM00387 Histidine kinase-like ATPases N900_16140 SM00448 cheY-homologous receiver domain N900_16160 SM00833 Cobalamin synthesis protein cobW C-terminal domain N900_16175 SM00890 Domain of unknown function N900_16180 SM00387 Histidine kinase-like ATPases N900_16180 SM00388 His Kinase A (phosphoacceptor) domain N900_16185 SM00448 cheY-homologous receiver domain N900_16185 SM00862 Transcriptional regulatory protein, C terminal N900_16205 SM00052 Putative diguanylate phosphodiesterase N900_16220 SM00867 YceI-like domain N900_16225 SM00116 Domain in cystathionine beta-synthase and other proteins. N900_16265 SM00782 PhnA Zinc-Ribbon N900_16295 SM00062 Bacterial periplasmic substrate-binding proteins N900_16295 SM00267 diguanylate cyclase N900_16315 SM00267 diguanylate cyclase N900_16330 SM01002 Alanine dehydrogenase/PNT, C-terminal domain N900_16330 SM01003 Alanine dehydrogenase/PNT, N-terminal domain N900_16340 SM00387 Histidine kinase-like ATPases N900_16340 SM00388 His Kinase A (phosphoacceptor) domain N900_16345 SM00448 cheY-homologous receiver domain N900_16345 SM00862 Transcriptional regulatory protein, C terminal N900_16390 SM00881 CoA binding domain N900_16455 SM00382 ATPases associated with a variety of cellular activities N900_16505 SM00345 helix_turn_helix gluconate operon transcriptional repressor N900_16505 SM00866 N900_16505 N900_16515 SM00382 ATPases associated with a variety of cellular activities N900_16580 SM00852 Probable molybdopterin binding domain N900_16595 SM00450 Rhodanese Homology Domain N900_16700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor N900_16710 SM00450 Rhodanese Homology Domain N900_16720 SM00563 Phosphate acyltransferases N900_16760 SM00354 helix_turn _helix lactose operon repressor N900_16765 SM00640 Glycosyl hydrolases family 32 N900_16780 SM00091 PAS domain N900_16780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_16800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_16800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_16830 SM00354 helix_turn _helix lactose operon repressor N900_16835 SM00421 helix_turn_helix, Lux Regulon N900_16835 SM00448 cheY-homologous receiver domain N900_16840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_16840 SM00387 Histidine kinase-like ATPases N900_16855 SM00926 Molybdopterin oxidoreductase Fe4S4 domain N900_16875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_16880 SM00421 helix_turn_helix, Lux Regulon N900_16880 SM00448 cheY-homologous receiver domain N900_16885 SM00387 Histidine kinase-like ATPases N900_16905 SM00382 ATPases associated with a variety of cellular activities N900_16925 SM00822 N900_16925 N900_16950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) N900_16950 SM00267 diguanylate cyclase N900_16960 SM00495 Chitin-binding domain type 3 N900_16960 SM00636 N900_16960 N900_16975 SM00448 cheY-homologous receiver domain N900_16980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_16980 SM00387 Histidine kinase-like ATPases N900_16980 SM00388 His Kinase A (phosphoacceptor) domain N900_17000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_17000 SM00387 Histidine kinase-like ATPases N900_17000 SM00388 His Kinase A (phosphoacceptor) domain N900_17000 SM00448 cheY-homologous receiver domain N900_17010 SM00851 MGS-like domain N900_17045 SM00387 Histidine kinase-like ATPases N900_17050 SM00989 N900_17050 N900_17070 SM00382 ATPases associated with a variety of cellular activities N900_17130 SM00387 Histidine kinase-like ATPases N900_17130 SM00388 His Kinase A (phosphoacceptor) domain N900_17130 SM00448 cheY-homologous receiver domain N900_17255 SM00062 Bacterial periplasmic substrate-binding proteins N900_17255 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. N900_17260 SM00382 ATPases associated with a variety of cellular activities N900_17270 SM00327 von Willebrand factor (vWF) type A domain N900_17275 SM00382 ATPases associated with a variety of cellular activities N900_17300 SM00487 DEAD-like helicases superfamily N900_17300 SM00490 helicase superfamily c-terminal domain N900_17320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_17320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_17335 SM00796 Allophanate hydrolase subunit 1 N900_17340 SM00797 Allophanate hydrolase subunit 2 N900_17350 SM00984 UDP binding domain N900_17360 SM00382 ATPases associated with a variety of cellular activities N900_17375 SM00052 Putative diguanylate phosphodiesterase N900_17375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. N900_17375 SM00267 diguanylate cyclase N900_17390 SM00271 DnaJ molecular chaperone homology domain N900_17425 SM00857 Resolvase, N terminal domain N900_17460 SM00020 Trypsin-like serine protease N900_17465 SM00487 DEAD-like helicases superfamily N900_17465 SM00490 helicase superfamily c-terminal domain N900_17470 SM00357 Cold shock protein domain N900_17470 SM00955 N900_17470 N900_17525 SM00924 MgtE intracellular N domain N900_17530 SM00883 Chaperonin 10 Kd subunit N900_17610 SM01266 N900_17610 N900_17615 SM01091 Transporter associated domain N900_17630 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N900_17650 SM00267 diguanylate cyclase N900_17660 SM00448 cheY-homologous receiver domain N900_17660 SM00850 LytTr DNA-binding domain N900_17665 SM00387 Histidine kinase-like ATPases N900_17685 SM00382 ATPases associated with a variety of cellular activities N900_17705 SM00642 Alpha-amylase domain N900_17730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) N900_17730 SM00091 PAS domain N900_17730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_17755 SM00345 helix_turn_helix gluconate operon transcriptional repressor N900_17820 SM00829 Enoylreductase N900_17840 SM00421 helix_turn_helix, Lux Regulon N900_17870 SM00481 DNA polymerase alpha chain like domain N900_17875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_17890 SM01350 N900_17890 N900_17900 SM00849 Metallo-beta-lactamase superfamily N900_17930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_17930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_17945 SM00729 Elongator protein 3, MiaB family, Radical SAM N900_17975 SM00382 ATPases associated with a variety of cellular activities N900_18005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_18020 SM00342 helix_turn_helix, arabinose operon control protein N900_18045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N900_18050 SM00357 Cold shock protein domain N900_18065 SM00342 helix_turn_helix, arabinose operon control protein N900_18075 SM00091 PAS domain N900_18075 SM00267 diguanylate cyclase N900_18080 SM00420 helix_turn_helix, Deoxyribose operon repressor N900_18080 SM01134 N900_18080 N900_18110 SM00382 ATPases associated with a variety of cellular activities N900_18125 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. N900_18135 SM00421 helix_turn_helix, Lux Regulon N900_18145 SM00260 Two component signalling adaptor domain N900_18145 SM00448 cheY-homologous receiver domain N900_18150 SM00347 helix_turn_helix multiple antibiotic resistance protein N900_18155 SM00267 diguanylate cyclase N900_18165 SM00530 Helix-turn-helix XRE-family like proteins N900_18170 SM00267 diguanylate cyclase N900_18170 SM01079 N900_18170 N900_18195 SM00267 diguanylate cyclase N900_18235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_18250 SM00382 ATPases associated with a variety of cellular activities N900_18255 SM00062 Bacterial periplasmic substrate-binding proteins N900_18305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18315 SM00487 DEAD-like helicases superfamily N900_18315 SM00490 helicase superfamily c-terminal domain N900_18340 SM00382 ATPases associated with a variety of cellular activities N900_18365 SM00342 helix_turn_helix, arabinose operon control protein N900_18385 SM00347 helix_turn_helix multiple antibiotic resistance protein N900_18435 SM00342 helix_turn_helix, arabinose operon control protein N900_18435 SM01009 AlkA N-terminal domain N900_18455 SM01154 N900_18455 N900_18470 SM00671 Sel1-like repeats. N900_18485 SM00642 Alpha-amylase domain N900_18495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_18510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_18525 SM00382 ATPases associated with a variety of cellular activities N900_18535 SM00062 Bacterial periplasmic substrate-binding proteins N900_18580 SM00849 Metallo-beta-lactamase superfamily N900_18600 SM00450 Rhodanese Homology Domain N900_18615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_18660 SM00344 helix_turn_helix ASNC type N900_18665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_18690 SM00342 helix_turn_helix, arabinose operon control protein N900_18705 SM00421 helix_turn_helix, Lux Regulon N900_18725 SM00052 Putative diguanylate phosphodiesterase N900_18725 SM00267 diguanylate cyclase N900_18730 SM00382 ATPases associated with a variety of cellular activities N900_18740 SM00331 Sigma factor PP2C-like phosphatases N900_18740 SM00448 cheY-homologous receiver domain N900_18750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18755 SM00448 cheY-homologous receiver domain N900_18765 SM00138 Methyltransferase, chemotaxis proteins N900_18770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N900_18770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N900_18775 SM00260 Two component signalling adaptor domain N900_18780 SM00260 Two component signalling adaptor domain N900_18790 SM00448 cheY-homologous receiver domain N900_18820 SM00382 ATPases associated with a variety of cellular activities N900_18830 SM00387 Histidine kinase-like ATPases N900_18830 SM00388 His Kinase A (phosphoacceptor) domain N900_18835 SM00448 cheY-homologous receiver domain N900_18835 SM00862 Transcriptional regulatory protein, C terminal N900_18845 SM00822 N900_18845 N900_18850 SM01236 N900_18850 N900_18875 SM00470 ParB-like nuclease domain