locus-tag class description VC0395_0001 PF07690 Major Facilitator Superfamily VC0395_0002 PF03009 Glycerophosphoryl diester phosphodiesterase family VC0395_0004 PF01048 Phosphorylase superfamily VC0395_0005 PF04973 Nicotinamide mononucleotide transporter VC0395_0006 PF00356 Bacterial regulatory proteins, lacI family VC0395_0007 PF00294 pfkB family carbohydrate kinase VC0395_0008 PF13407 Periplasmic binding protein domain VC0395_0009 PF02653 Branched-chain amino acid transport system / permease component VC0395_0010 PF00005 ABC transporter VC0395_0011 PF05025 RbsD / FucU transport protein family VC0395_0014 PF04717 Type VI secretion system, phage-baseplate injector VC0395_0014 PF16671 Actin cross-linking domain VC0395_0021 PF00004 ATPase family associated with various cellular activities (AAA) VC0395_0021 PF07724 AAA domain (Cdc48 subfamily) VC0395_0021 PF10431 C-terminal, D2-small domain, of ClpB protein VC0395_0021 PF17871 AAA lid domain VC0395_0035 PF00849 RNA pseudouridylate synthase VC0395_0036 PF01740 STAS domain VC0395_0036 PF00916 Sulfate permease family VC0395_0037 PF13419 Haloacid dehalogenase-like hydrolase VC0395_0038 PF00563 EAL domain VC0395_0038 PF00196 Bacterial regulatory proteins, luxR family VC0395_0039 PF00581 Rhodanese-like domain VC0395_0040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VC0395_0040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VC0395_0041 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VC0395_0041 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VC0395_0043 PF07504 Fungalysin/Thermolysin Propeptide Motif VC0395_0043 PF01447 Thermolysin metallopeptidase, catalytic domain VC0395_0043 PF01483 Proprotein convertase P-domain VC0395_0043 PF02868 Thermolysin metallopeptidase, alpha-helical domain VC0395_0048 PF02001 Protein of unknown function DUF134 VC0395_0052 PF00375 Sodium:dicarboxylate symporter family VC0395_0056 PF09278 MerR, DNA binding VC0395_0056 PF00376 MerR family regulatory protein VC0395_0057 PF07690 Major Facilitator Superfamily VC0395_0058 PF03466 LysR substrate binding domain VC0395_0058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0059 PF13188 PAS domain VC0395_0059 PF00563 EAL domain VC0395_0059 PF03707 Bacterial signalling protein N terminal repeat VC0395_0059 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0060 PF08525 Opacity-associated protein A N-terminal motif VC0395_0060 PF01551 Peptidase family M23 VC0395_0060 PF01476 LysM domain VC0395_0062 PF01740 STAS domain VC0395_0062 PF00916 Sulfate permease family VC0395_0065 PF00563 EAL domain VC0395_0065 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0065 PF03707 Bacterial signalling protein N terminal repeat VC0395_0066 PF00005 ABC transporter VC0395_0067 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0068 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0069 PF12849 PBP superfamily domain VC0395_0070 PF12729 Four helix bundle sensory module for signal transduction VC0395_0070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0070 PF00672 HAMP domain VC0395_0074 PF00593 TonB dependent receptor VC0395_0074 PF07715 TonB-dependent Receptor Plug Domain VC0395_0075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VC0395_0075 PF00326 Prolyl oligopeptidase family VC0395_0076 PF00270 DEAD/DEAH box helicase VC0395_0076 PF00271 Helicase conserved C-terminal domain VC0395_0079 PF03734 L,D-transpeptidase catalytic domain VC0395_0079 PF17969 L,D-transpeptidase C-terminal domain VC0395_0079 PF01476 LysM domain VC0395_0080 PF00875 DNA photolyase VC0395_0080 PF03441 FAD binding domain of DNA photolyase VC0395_0081 PF13411 MerR HTH family regulatory protein VC0395_0082 PF08349 Protein of unknown function (DUF1722) VC0395_0083 PF01048 Phosphorylase superfamily VC0395_0086 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0087 PF11742 Protein of unknown function (DUF3302) VC0395_0088 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VC0395_0088 PF00529 HlyD membrane-fusion protein of T1SS VC0395_0091 PF07238 PilZ domain VC0395_0091 PF12945 Flagellar protein YcgR VC0395_0092 PF03616 Sodium/glutamate symporter VC0395_0096 PF02630 SCO1/SenC VC0395_0098 PF00375 Sodium:dicarboxylate symporter family VC0395_0099 PF01569 PAP2 superfamily VC0395_0103 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0103 PF02743 Cache domain VC0395_0103 PF00672 HAMP domain VC0395_0106 PF00704 Glycosyl hydrolases family 18 VC0395_0106 PF08329 Chitinase A, N-terminal domain VC0395_0107 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VC0395_0108 PF00939 Sodium:sulfate symporter transmembrane region VC0395_0110 PF01168 Alanine racemase, N-terminal domain VC0395_0110 PF01757 Acyltransferase family VC0395_0110 PF00842 Alanine racemase, C-terminal domain VC0395_0115 PF16671 Actin cross-linking domain VC0395_0115 PF04717 Type VI secretion system, phage-baseplate injector VC0395_0116 PF05638 Type VI secretion system effector, Hcp VC0395_0117 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VC0395_0117 PF02806 Alpha amylase, C-terminal all-beta domain VC0395_0117 PF00128 Alpha amylase, catalytic domain VC0395_0118 PF02446 4-alpha-glucanotransferase VC0395_0119 PF00343 Carbohydrate phosphorylase VC0395_0120 PF00196 Bacterial regulatory proteins, luxR family VC0395_0120 PF17874 MalT-like TPR region VC0395_0121 PF10928 Protein of unknown function (DUF2810) VC0395_0122 PF00672 HAMP domain VC0395_0122 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0122 PF17200 Single Cache domain 2 VC0395_0123 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VC0395_0123 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VC0395_0124 PF01709 Transcriptional regulator VC0395_0130 PF13614 AAA domain VC0395_0130 PF18607 ParA helix turn helix domain VC0395_0131 PF08775 ParB family VC0395_0131 PF02195 ParB-like nuclease domain VC0395_0132 PF13416 Bacterial extracellular solute-binding protein VC0395_0133 PF13718 GNAT acetyltransferase 2 VC0395_0133 PF05127 Helicase VC0395_0135 PF00501 AMP-binding enzyme VC0395_0139 PF00072 Response regulator receiver domain VC0395_0139 PF00486 Transcriptional regulatory protein, C terminal VC0395_0140 PF08521 Two-component sensor kinase N-terminal VC0395_0140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0140 PF00512 His Kinase A (phospho-acceptor) domain VC0395_0141 PF08019 Phosphoethanolamine transferase EptA/EptB VC0395_0141 PF00884 Sulfatase VC0395_0142 PF00005 ABC transporter VC0395_0142 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_0143 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0143 PF12911 N-terminal TM domain of oligopeptide transport permease C VC0395_0144 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0147 PF00072 Response regulator receiver domain VC0395_0148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0148 PF02895 Signal transducing histidine kinase, homodimeric domain VC0395_0148 PF09078 CheY binding VC0395_0148 PF01584 CheW-like domain VC0395_0148 PF01627 Hpt domain VC0395_0149 PF01584 CheW-like domain VC0395_0150 PF01584 CheW-like domain VC0395_0151 PF02203 Tar ligand binding domain homologue VC0395_0151 PF00672 HAMP domain VC0395_0151 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0152 PF01739 CheR methyltransferase, SAM binding domain VC0395_0152 PF03705 CheR methyltransferase, all-alpha domain VC0395_0153 PF03975 CheD chemotactic sensory transduction VC0395_0154 PF00072 Response regulator receiver domain VC0395_0154 PF01339 CheB methylesterase VC0395_0155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0155 PF02743 Cache domain VC0395_0155 PF00672 HAMP domain VC0395_0157 PF00072 Response regulator receiver domain VC0395_0157 PF00486 Transcriptional regulatory protein, C terminal VC0395_0159 PF03412 Peptidase C39 family VC0395_0159 PF00005 ABC transporter VC0395_0159 PF00664 ABC transporter transmembrane region VC0395_0162 PF00529 HlyD membrane-fusion protein of T1SS VC0395_0163 PF01243 Pyridoxamine 5'-phosphate oxidase VC0395_0163 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VC0395_0164 PF00072 Response regulator receiver domain VC0395_0164 PF00196 Bacterial regulatory proteins, luxR family VC0395_0165 PF03781 Sulfatase-modifying factor enzyme 1 VC0395_0168 PF12833 Helix-turn-helix domain VC0395_0169 PF00171 Aldehyde dehydrogenase family VC0395_0169 PF01619 Proline dehydrogenase VC0395_0169 PF14850 DNA-binding domain of Proline dehydrogenase VC0395_0169 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VC0395_0171 PF00474 Sodium:solute symporter family VC0395_0173 PF02743 Cache domain VC0395_0173 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0173 PF00672 HAMP domain VC0395_0174 PF01037 Lrp/AsnC ligand binding domain VC0395_0175 PF00171 Aldehyde dehydrogenase family VC0395_0179 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VC0395_0179 PF01276 Orn/Lys/Arg decarboxylase, major domain VC0395_0179 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VC0395_0180 PF13520 Amino acid permease VC0395_0181 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VC0395_0182 PF04013 Putative SAM-dependent RNA methyltransferase VC0395_0183 PF03466 LysR substrate binding domain VC0395_0183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0184 PF00106 short chain dehydrogenase VC0395_0185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0185 PF02743 Cache domain VC0395_0185 PF00672 HAMP domain VC0395_0186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0186 PF03466 LysR substrate binding domain VC0395_0187 PF13460 NAD(P)H-binding VC0395_0193 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VC0395_0194 PF05068 Mannitol repressor VC0395_0195 PF08125 Mannitol dehydrogenase C-terminal domain VC0395_0195 PF01232 Mannitol dehydrogenase Rossmann domain VC0395_0196 PF02378 Phosphotransferase system, EIIC VC0395_0196 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC0395_0196 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC0395_0198 PF01551 Peptidase family M23 VC0395_0198 PF04225 Opacity-associated protein A LysM-like domain VC0395_0200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC0395_0200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC0395_0200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC0395_0200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VC0395_0201 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0202 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_0203 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0204 PF00005 ABC transporter VC0395_0205 PF00793 DAHP synthetase I family VC0395_0207 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0207 PF00672 HAMP domain VC0395_0210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0210 PF00672 HAMP domain VC0395_0210 PF12729 Four helix bundle sensory module for signal transduction VC0395_0212 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VC0395_0212 PF00128 Alpha amylase, catalytic domain VC0395_0213 PF02264 LamB porin VC0395_0214 PF07148 Maltose operon periplasmic protein precursor (MalM) VC0395_0216 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VC0395_0220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0220 PF03466 LysR substrate binding domain VC0395_0221 PF07681 DoxX VC0395_0222 PF06029 AlkA N-terminal domain VC0395_0222 PF00730 HhH-GPD superfamily base excision DNA repair protein VC0395_0223 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VC0395_0223 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VC0395_0225 PF03600 Citrate transporter VC0395_0226 PF07670 Nucleoside recognition VC0395_0227 PF07670 Nucleoside recognition VC0395_0228 PF00462 Glutaredoxin VC0395_0229 PF00892 EamA-like transporter family VC0395_0230 PF13609 Gram-negative porin VC0395_0231 PF02566 OsmC-like protein VC0395_0232 PF01047 MarR family VC0395_0233 PF01557 Fumarylacetoacetate (FAA) hydrolase family VC0395_0236 PF12833 Helix-turn-helix domain VC0395_0237 PF01810 LysE type translocator VC0395_0240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VC0395_0242 PF00005 ABC transporter VC0395_0242 PF00664 ABC transporter transmembrane region VC0395_0244 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VC0395_0246 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0246 PF03466 LysR substrate binding domain VC0395_0248 PF00270 DEAD/DEAH box helicase VC0395_0248 PF00271 Helicase conserved C-terminal domain VC0395_0249 PF01554 MatE VC0395_0250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0250 PF08447 PAS fold VC0395_0251 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VC0395_0251 PF00391 PEP-utilising enzyme, mobile domain VC0395_0251 PF02896 PEP-utilising enzyme, TIM barrel domain VC0395_0252 PF03618 Kinase/pyrophosphorylase VC0395_0254 PF01070 FMN-dependent dehydrogenase VC0395_0255 PF02652 L-lactate permease VC0395_0257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0257 PF03466 LysR substrate binding domain VC0395_0259 PF00672 HAMP domain VC0395_0259 PF17200 Single Cache domain 2 VC0395_0259 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0260 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_0261 PF00005 ABC transporter VC0395_0261 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_0263 PF05362 Lon protease (S16) C-terminal proteolytic domain VC0395_0263 PF13654 AAA domain VC0395_0265 PF00672 HAMP domain VC0395_0265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0265 PF17200 Single Cache domain 2 VC0395_0267 PF07690 Major Facilitator Superfamily VC0395_0270 PF06865 Pyrimidine/purine nucleoside phosphorylase VC0395_0271 PF05726 Pirin C-terminal cupin domain VC0395_0271 PF02678 Pirin VC0395_0273 PF00563 EAL domain VC0395_0273 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0274 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0274 PF03466 LysR substrate binding domain VC0395_0279 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0279 PF03707 Bacterial signalling protein N terminal repeat VC0395_0279 PF00563 EAL domain VC0395_0283 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0284 PF01047 MarR family VC0395_0285 PF01584 CheW-like domain VC0395_0285 PF00072 Response regulator receiver domain VC0395_0287 PF00196 Bacterial regulatory proteins, luxR family VC0395_0288 PF01906 Putative heavy-metal-binding VC0395_0291 PF13302 Acetyltransferase (GNAT) domain VC0395_0292 PF00005 ABC transporter VC0395_0292 PF08402 TOBE domain VC0395_0294 PF01547 Bacterial extracellular solute-binding protein VC0395_0295 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0295 PF14785 Maltose transport system permease protein MalF P2 domain VC0395_0296 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0299 PF08220 DeoR-like helix-turn-helix domain VC0395_0299 PF00455 DeoR C terminal sensor domain VC0395_0300 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0300 PF08448 PAS fold VC0395_0303 PF12833 Helix-turn-helix domain VC0395_0303 PF00072 Response regulator receiver domain VC0395_0306 PF00313 'Cold-shock' DNA-binding domain VC0395_0308 PF05661 Protein of unknown function (DUF808) VC0395_0309 PF05958 tRNA (Uracil-5-)-methyltransferase VC0395_0311 PF05656 Protein of unknown function (DUF805) VC0395_0313 PF01979 Amidohydrolase family VC0395_0315 PF03476 MOSC N-terminal beta barrel domain VC0395_0315 PF03473 MOSC domain VC0395_0315 PF03473 MOSC domain VC0395_0315 PF00111 2Fe-2S iron-sulfur cluster binding domain VC0395_0315 PF00111 2Fe-2S iron-sulfur cluster binding domain VC0395_0315 PF03476 MOSC N-terminal beta barrel domain VC0395_0316 PF02743 Cache domain VC0395_0316 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0316 PF00672 HAMP domain VC0395_0322 PF00005 ABC transporter VC0395_0323 PF01032 FecCD transport family VC0395_0324 PF01497 Periplasmic binding protein VC0395_0325 PF02472 Biopolymer transport protein ExbD/TolR VC0395_0326 PF01618 MotA/TolQ/ExbB proton channel family VC0395_0327 PF03544 Gram-negative bacterial TonB protein C-terminal VC0395_0328 PF04055 Radical SAM superfamily VC0395_0329 PF06228 Haem utilisation ChuX/HutX VC0395_0330 PF01243 Pyridoxamine 5'-phosphate oxidase VC0395_0331 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0331 PF00672 HAMP domain VC0395_0332 PF13556 PucR C-terminal helix-turn-helix domain VC0395_0332 PF17853 GGDEF-like domain VC0395_0332 PF05651 Putative sugar diacid recognition VC0395_0333 PF02447 GntP family permease VC0395_0334 PF02595 Glycerate kinase family VC0395_0339 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VC0395_0339 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VC0395_0340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VC0395_0341 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VC0395_0341 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VC0395_0342 PF01966 HD domain VC0395_0348 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC0395_0349 PF03466 LysR substrate binding domain VC0395_0349 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0352 PF00155 Aminotransferase class I and II VC0395_0353 PF08240 Alcohol dehydrogenase GroES-like domain VC0395_0353 PF00107 Zinc-binding dehydrogenase VC0395_0361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0361 PF03466 LysR substrate binding domain VC0395_0362 PF00291 Pyridoxal-phosphate dependent enzyme VC0395_0364 PF02322 Cytochrome bd terminal oxidase subunit II VC0395_0365 PF01654 Cytochrome bd terminal oxidase subunit I VC0395_0367 PF00155 Aminotransferase class I and II VC0395_0367 PF00392 Bacterial regulatory proteins, gntR family VC0395_0368 PF00768 D-alanyl-D-alanine carboxypeptidase VC0395_0370 PF03922 OmpW family VC0395_0371 PF04151 Bacterial pre-peptidase C-terminal domain VC0395_0371 PF07504 Fungalysin/Thermolysin Propeptide Motif VC0395_0371 PF02868 Thermolysin metallopeptidase, alpha-helical domain VC0395_0371 PF01447 Thermolysin metallopeptidase, catalytic domain VC0395_0371 PF03413 Peptidase propeptide and YPEB domain VC0395_0372 PF13426 PAS domain VC0395_0372 PF08447 PAS fold VC0395_0372 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0373 PF12262 Bacterial virulence factor lipase N-terminal VC0395_0374 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VC0395_0377 PF00128 Alpha amylase, catalytic domain VC0395_0378 PF00248 Aldo/keto reductase family VC0395_0382 PF00005 ABC transporter VC0395_0383 PF12704 MacB-like periplasmic core domain VC0395_0383 PF02687 FtsX-like permease family VC0395_0383 PF00005 ABC transporter VC0395_0386 PF13492 GAF domain VC0395_0386 PF07694 5TMR of 5TMR-LYT VC0395_0386 PF06580 Histidine kinase VC0395_0386 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0387 PF00072 Response regulator receiver domain VC0395_0387 PF04397 LytTr DNA-binding domain VC0395_0389 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0390 PF13520 Amino acid permease VC0395_0393 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC0395_0393 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VC0395_0395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VC0395_0397 PF02566 OsmC-like protein VC0395_0398 PF00571 CBS domain VC0395_0398 PF03471 Transporter associated domain VC0395_0398 PF01595 Cyclin M transmembrane N-terminal domain VC0395_0399 PF14602 Hexapeptide repeat of succinyl-transferase VC0395_0399 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_0399 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VC0395_0400 PF00892 EamA-like transporter family VC0395_0402 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0402 PF03466 LysR substrate binding domain VC0395_0406 PF13193 AMP-binding enzyme C-terminal domain VC0395_0406 PF00501 AMP-binding enzyme VC0395_0407 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VC0395_0408 PF01329 Pterin 4 alpha carbinolamine dehydratase VC0395_0409 PF00583 Acetyltransferase (GNAT) family VC0395_0410 PF00202 Aminotransferase class-III VC0395_0411 PF06339 Ectoine synthase VC0395_0412 PF13840 ACT domain VC0395_0412 PF00696 Amino acid kinase family VC0395_0414 PF00118 TCP-1/cpn60 chaperonin family VC0395_0415 PF00166 Chaperonin 10 Kd subunit VC0395_0416 PF03448 MgtE intracellular N domain VC0395_0416 PF01769 Divalent cation transporter VC0395_0416 PF00571 CBS domain VC0395_0419 PF17944 Arginine decarboxylase C-terminal helical extension VC0395_0419 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VC0395_0419 PF17810 Arginine decarboxylase helical bundle domain VC0395_0420 PF00491 Arginase family VC0395_0421 PF04151 Bacterial pre-peptidase C-terminal domain VC0395_0421 PF04389 Peptidase family M28 VC0395_0422 PF02868 Thermolysin metallopeptidase, alpha-helical domain VC0395_0422 PF01447 Thermolysin metallopeptidase, catalytic domain VC0395_0422 PF03413 Peptidase propeptide and YPEB domain VC0395_0422 PF07504 Fungalysin/Thermolysin Propeptide Motif VC0395_0422 PF04151 Bacterial pre-peptidase C-terminal domain VC0395_0423 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VC0395_0423 PF18416 N-acetylglucosamine binding protein domain 2 VC0395_0425 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VC0395_0426 PF01575 MaoC like domain VC0395_0427 PF12849 PBP superfamily domain VC0395_0429 PF00773 RNB domain VC0395_0429 PF00575 S1 RNA binding domain VC0395_0429 PF08206 Ribonuclease B OB domain VC0395_0430 PF00270 DEAD/DEAH box helicase VC0395_0430 PF03880 DbpA RNA binding domain VC0395_0430 PF00271 Helicase conserved C-terminal domain VC0395_0432 PF00884 Sulfatase VC0395_0433 PF00294 pfkB family carbohydrate kinase VC0395_0436 PF13419 Haloacid dehalogenase-like hydrolase VC0395_0438 PF02796 Helix-turn-helix domain of resolvase VC0395_0438 PF00239 Resolvase, N terminal domain VC0395_0441 PF01527 Transposase VC0395_0442 PF00665 Integrase core domain VC0395_0445 PF13597 Anaerobic ribonucleoside-triphosphate reductase VC0395_0445 PF03477 ATP cone domain VC0395_0447 PF00155 Aminotransferase class I and II VC0395_0448 PF18030 RimK PreATP-grasp domain VC0395_0448 PF08443 RimK-like ATP-grasp domain VC0395_0449 PF02378 Phosphotransferase system, EIIC VC0395_0449 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC0395_0450 PF00294 pfkB family carbohydrate kinase VC0395_0451 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC0395_0451 PF00381 PTS HPr component phosphorylation site VC0395_0452 PF00356 Bacterial regulatory proteins, lacI family VC0395_0452 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VC0395_0453 PF00149 Calcineurin-like phosphoesterase VC0395_0453 PF12320 Type 5 capsule protein repressor C-terminal domain VC0395_0454 PF13476 AAA domain VC0395_0455 PF00072 Response regulator receiver domain VC0395_0455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0456 PF00155 Aminotransferase class I and II VC0395_0459 PF00654 Voltage gated chloride channel VC0395_0460 PF07683 Cobalamin synthesis protein cobW C-terminal domain VC0395_0460 PF02492 CobW/HypB/UreG, nucleotide-binding domain VC0395_0461 PF01926 50S ribosome-binding GTPase VC0395_0462 PF02705 K+ potassium transporter VC0395_0463 PF10371 Domain of unknown function VC0395_0463 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VC0395_0463 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC0395_0463 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VC0395_0463 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VC0395_0464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0464 PF13493 Domain of unknown function (DUF4118) VC0395_0464 PF00512 His Kinase A (phospho-acceptor) domain VC0395_0464 PF02702 Osmosensitive K+ channel His kinase sensor domain VC0395_0465 PF00072 Response regulator receiver domain VC0395_0465 PF00486 Transcriptional regulatory protein, C terminal VC0395_0466 PF02416 mttA/Hcf106 family VC0395_0467 PF09335 SNARE associated Golgi protein VC0395_0470 PF00563 EAL domain VC0395_0470 PF10388 EAL-domain associated signalling protein domain VC0395_0472 PF01292 Prokaryotic cytochrome b561 VC0395_0473 PF04264 YceI-like domain VC0395_0474 PF01226 Formate/nitrite transporter VC0395_0475 PF03466 LysR substrate binding domain VC0395_0475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0476 PF06496 Protein of unknown function (DUF1097) VC0395_0477 PF11398 Protein of unknown function (DUF2813) VC0395_0478 PF02872 5'-nucleotidase, C-terminal domain VC0395_0478 PF00149 Calcineurin-like phosphoesterase VC0395_0479 PF03741 Integral membrane protein TerC family VC0395_0481 PF08274 PhnA Zinc-Ribbon VC0395_0481 PF03831 PhnA domain VC0395_0489 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0489 PF17151 Periplasmic sensor domain VC0395_0493 PF17158 Membrane-associated sensor, integral membrane domain VC0395_0493 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0497 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VC0395_0497 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VC0395_0497 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VC0395_0498 PF02233 NAD(P) transhydrogenase beta subunit VC0395_0500 PF00072 Response regulator receiver domain VC0395_0500 PF00486 Transcriptional regulatory protein, C terminal VC0395_0503 PF03701 Uncharacterised protein family (UPF0181) VC0395_0505 PF01381 Helix-turn-helix VC0395_0509 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII VC0395_0510 PF10734 Protein of unknown function (DUF2523) VC0395_0511 PF05707 Zonular occludens toxin (Zot) VC0395_0512 PF01375 Heat-labile enterotoxin alpha chain VC0395_0513 PF01253 Translation initiation factor SUI1 VC0395_0515 PF01820 D-ala D-ala ligase N-terminus VC0395_0515 PF07478 D-ala D-ala ligase C-terminus VC0395_0517 PF13607 Succinyl-CoA ligase like flavodoxin domain VC0395_0517 PF13380 CoA binding domain VC0395_0517 PF00583 Acetyltransferase (GNAT) family VC0395_0518 PF03466 LysR substrate binding domain VC0395_0518 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0519 PF00593 TonB dependent receptor VC0395_0519 PF07715 TonB-dependent Receptor Plug Domain VC0395_0521 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC0395_0521 PF12793 Sugar transport-related sRNA regulator N-term VC0395_0523 PF03061 Thioesterase superfamily VC0395_0528 PF00043 Glutathione S-transferase, C-terminal domain VC0395_0528 PF02798 Glutathione S-transferase, N-terminal domain VC0395_0531 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_0531 PF03479 Plants and Prokaryotes Conserved (PCC) domain VC0395_0531 PF12804 MobA-like NTP transferase domain VC0395_0532 PF00005 ABC transporter VC0395_0532 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_0533 PF12911 N-terminal TM domain of oligopeptide transport permease C VC0395_0533 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0534 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC0395_0540 PF00854 POT family VC0395_0542 PF00392 Bacterial regulatory proteins, gntR family VC0395_0542 PF07702 UTRA domain VC0395_0543 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0544 PF00005 ABC transporter VC0395_0546 PF00266 Aminotransferase class-V VC0395_0548 PF13419 Haloacid dehalogenase-like hydrolase VC0395_0549 PF14760 Rnk N-terminus VC0395_0549 PF01272 Transcription elongation factor, GreA/GreB, C-term VC0395_0550 PF13419 Haloacid dehalogenase-like hydrolase VC0395_0554 PF01741 Large-conductance mechanosensitive channel, MscL VC0395_0556 PF01268 Formate--tetrahydrofolate ligase VC0395_0557 PF01625 Peptide methionine sulfoxide reductase VC0395_0557 PF01641 SelR domain VC0395_0558 PF01227 GTP cyclohydrolase I VC0395_0559 PF03453 MoeA N-terminal region (domain I and II) VC0395_0559 PF00994 Probable molybdopterin binding domain VC0395_0559 PF03454 MoeA C-terminal region (domain IV) VC0395_0560 PF00899 ThiF family VC0395_0562 PF00581 Rhodanese-like domain VC0395_0563 PF04198 Putative sugar-binding domain VC0395_0564 PF00923 Transaldolase/Fructose-6-phosphate aldolase VC0395_0565 PF00456 Transketolase, thiamine diphosphate binding domain VC0395_0565 PF02780 Transketolase, C-terminal domain VC0395_0565 PF02779 Transketolase, pyrimidine binding domain VC0395_0569 PF01609 Transposase DDE domain VC0395_0569 PF05598 Transposase domain (DUF772) VC0395_0573 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VC0395_0573 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC0395_0576 PF06942 GlpM protein VC0395_0579 PF03992 Antibiotic biosynthesis monooxygenase VC0395_0580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0580 PF03466 LysR substrate binding domain VC0395_0581 PF00881 Nitroreductase family VC0395_0582 PF00873 AcrB/AcrD/AcrF family VC0395_0585 PF04143 Sulphur transport VC0395_0588 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC0395_0588 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_0597 PF00367 phosphotransferase system, EIIB VC0395_0597 PF02378 Phosphotransferase system, EIIC VC0395_0599 PF08244 Glycosyl hydrolases family 32 C terminal VC0395_0599 PF00251 Glycosyl hydrolases family 32 N-terminal domain VC0395_0600 PF00294 pfkB family carbohydrate kinase VC0395_0601 PF01266 FAD dependent oxidoreductase VC0395_0601 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VC0395_0602 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0602 PF00672 HAMP domain VC0395_0603 PF13488 Glycine zipper VC0395_0603 PF00691 OmpA family VC0395_0604 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VC0395_0604 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC0395_0605 PF13419 Haloacid dehalogenase-like hydrolase VC0395_0606 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0606 PF00672 HAMP domain VC0395_0606 PF12729 Four helix bundle sensory module for signal transduction VC0395_0607 PF03606 C4-dicarboxylate anaerobic carrier VC0395_0608 PF03313 Serine dehydratase alpha chain VC0395_0608 PF03315 Serine dehydratase beta chain VC0395_0609 PF00474 Sodium:solute symporter family VC0395_0612 PF00356 Bacterial regulatory proteins, lacI family VC0395_0613 PF00196 Bacterial regulatory proteins, luxR family VC0395_0613 PF00072 Response regulator receiver domain VC0395_0614 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VC0395_0614 PF00672 HAMP domain VC0395_0614 PF07730 Histidine kinase VC0395_0614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0615 PF12838 4Fe-4S dicluster domain VC0395_0615 PF13187 4Fe-4S dicluster domain VC0395_0617 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VC0395_0617 PF00384 Molybdopterin oxidoreductase VC0395_0617 PF01568 Molydopterin dinucleotide binding domain VC0395_0618 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VC0395_0619 PF03264 NapC/NirT cytochrome c family, N-terminal region VC0395_0621 PF01966 HD domain VC0395_0622 PF00196 Bacterial regulatory proteins, luxR family VC0395_0622 PF00072 Response regulator receiver domain VC0395_0623 PF07730 Histidine kinase VC0395_0623 PF05231 MASE1 VC0395_0623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0624 PF07690 Major Facilitator Superfamily VC0395_0626 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0627 PF08402 TOBE domain VC0395_0627 PF00005 ABC transporter VC0395_0628 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VC0395_0630 PF02803 Thiolase, C-terminal domain VC0395_0630 PF00108 Thiolase, N-terminal domain VC0395_0631 PF00106 short chain dehydrogenase VC0395_0632 PF02355 Protein export membrane protein VC0395_0632 PF07549 SecD/SecF GG Motif VC0395_0633 PF13721 SecD export protein N-terminal TM region VC0395_0633 PF07549 SecD/SecF GG Motif VC0395_0633 PF02355 Protein export membrane protein VC0395_0636 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0636 PF17158 Membrane-associated sensor, integral membrane domain VC0395_0637 PF00483 Nucleotidyl transferase VC0395_0638 PF06483 Chitinase C VC0395_0638 PF00704 Glycosyl hydrolases family 18 VC0395_0640 PF00465 Iron-containing alcohol dehydrogenase VC0395_0641 PF02954 Bacterial regulatory protein, Fis family VC0395_0641 PF00072 Response regulator receiver domain VC0395_0641 PF14532 Sigma-54 interaction domain VC0395_0643 PF02743 Cache domain VC0395_0643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0643 PF00512 His Kinase A (phospho-acceptor) domain VC0395_0646 PF07690 Major Facilitator Superfamily VC0395_0647 PF02887 Pyruvate kinase, alpha/beta domain VC0395_0647 PF00224 Pyruvate kinase, barrel domain VC0395_0648 PF00072 Response regulator receiver domain VC0395_0648 PF01627 Hpt domain VC0395_0648 PF00672 HAMP domain VC0395_0648 PF00512 His Kinase A (phospho-acceptor) domain VC0395_0648 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0649 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VC0395_0650 PF02142 MGS-like domain VC0395_0651 PF00857 Isochorismatase family VC0395_0653 PF01219 Prokaryotic diacylglycerol kinase VC0395_0656 PF12462 DNA helicase IV / RNA helicase N terminal VC0395_0656 PF13361 UvrD-like helicase C-terminal domain VC0395_0656 PF00580 UvrD/REP helicase N-terminal domain VC0395_0657 PF12805 FUSC-like inner membrane protein yccS VC0395_0658 PF00512 His Kinase A (phospho-acceptor) domain VC0395_0658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0658 PF13188 PAS domain VC0395_0658 PF00072 Response regulator receiver domain VC0395_0658 PF08448 PAS fold VC0395_0663 PF03459 TOBE domain VC0395_0663 PF00005 ABC transporter VC0395_0664 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0666 PF07685 CobB/CobQ-like glutamine amidotransferase domain VC0395_0666 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VC0395_0671 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0671 PF00512 His Kinase A (phospho-acceptor) domain VC0395_0671 PF09308 LuxQ, periplasmic VC0395_0671 PF00072 Response regulator receiver domain VC0395_0673 PF13407 Periplasmic binding protein domain VC0395_0675 PF01541 GIY-YIG catalytic domain VC0395_0676 PF04337 Protein of unknown function, DUF480 VC0395_0679 PF04363 Protein of unknown function (DUF496) VC0395_0682 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VC0395_0682 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VC0395_0683 PF00230 Major intrinsic protein VC0395_0686 PF01266 FAD dependent oxidoreductase VC0395_0686 PF04324 BFD-like [2Fe-2S] binding domain VC0395_0687 PF00890 FAD binding domain VC0395_0688 PF02754 Cysteine-rich domain VC0395_0688 PF13183 4Fe-4S dicluster domain VC0395_0689 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VC0395_0689 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VC0395_0690 PF00085 Thioredoxin VC0395_0691 PF07690 Major Facilitator Superfamily VC0395_0697 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_0697 PF03466 LysR substrate binding domain VC0395_0698 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0699 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_0700 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_0701 PF00005 ABC transporter VC0395_0703 PF05762 VWA domain containing CoxE-like protein VC0395_0704 PF07728 AAA domain (dynein-related subfamily) VC0395_0704 PF17868 AAA lid domain VC0395_0704 PF12592 Protein of unknown function (DUF3763) VC0395_0705 PF00293 NUDIX domain VC0395_0706 PF01212 Beta-eliminating lyase VC0395_0707 PF00034 Cytochrome c VC0395_0708 PF08361 MAATS-type transcriptional repressor, C-terminal region VC0395_0708 PF00440 Bacterial regulatory proteins, tetR family VC0395_0709 PF00270 DEAD/DEAH box helicase VC0395_0709 PF00271 Helicase conserved C-terminal domain VC0395_0710 PF04336 Acyl carrier protein phosphodiesterase VC0395_0712 PF03222 Tryptophan/tyrosine permease family VC0395_0713 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0713 PF12729 Four helix bundle sensory module for signal transduction VC0395_0713 PF00672 HAMP domain VC0395_0714 PF16363 GDP-mannose 4,6 dehydratase VC0395_0716 PF03746 LamB/YcsF family VC0395_0718 PF02626 Carboxyltransferase domain, subdomain A and B VC0395_0720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VC0395_0720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VC0395_0723 PF00005 ABC transporter VC0395_0724 PF13472 GDSL-like Lipase/Acylhydrolase family VC0395_0725 PF07055 Enoyl reductase FAD binding domain VC0395_0725 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VC0395_0725 PF12241 Trans-2-enoyl-CoA reductase catalytic region VC0395_0726 PF00498 FHA domain VC0395_0726 PF00563 EAL domain VC0395_0726 PF00990 Diguanylate cyclase, GGDEF domain VC0395_0728 PF00226 DnaJ domain VC0395_0728 PF01556 DnaJ C terminal domain VC0395_0728 PF00684 DnaJ central domain VC0395_0731 PF01527 Transposase VC0395_0732 PF00665 Integrase core domain VC0395_0738 PF00665 Integrase core domain VC0395_0739 PF01527 Transposase VC0395_0740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC0395_0751 PF01797 Transposase IS200 like VC0395_0755 PF07859 alpha/beta hydrolase fold VC0395_0794 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VC0395_0796 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC0395_0799 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_0800 PF05598 Transposase domain (DUF772) VC0395_0800 PF01609 Transposase DDE domain VC0395_0803 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA VC0395_0804 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system VC0395_0813 PF12833 Helix-turn-helix domain VC0395_0813 PF01965 DJ-1/PfpI family VC0395_0821 PF01555 DNA methylase VC0395_0823 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VC0395_0824 PF08212 Lipocalin-like domain VC0395_0829 PF17676 LD-carboxypeptidase C-terminal domain VC0395_0829 PF02016 LD-carboxypeptidase N-terminal domain VC0395_0837 PF04229 GrpB protein VC0395_0868 PF08212 Lipocalin-like domain VC0395_0872 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC0395_0878 PF08212 Lipocalin-like domain VC0395_0886 PF02016 LD-carboxypeptidase N-terminal domain VC0395_0886 PF17676 LD-carboxypeptidase C-terminal domain VC0395_0905 PF01810 LysE type translocator VC0395_0906 PF04229 GrpB protein VC0395_0912 PF04229 GrpB protein VC0395_0920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC0395_0927 PF02567 Phenazine biosynthesis-like protein VC0395_0929 PF01381 Helix-turn-helix VC0395_0930 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB VC0395_0933 PF04229 GrpB protein VC0395_0938 PF13495 Phage integrase, N-terminal SAM-like domain VC0395_0938 PF00589 Phage integrase family VC0395_0939 PF00453 Ribosomal protein L20 VC0395_0940 PF01632 Ribosomal protein L35 VC0395_0941 PF00707 Translation initiation factor IF-3, C-terminal domain VC0395_0941 PF05198 Translation initiation factor IF-3, N-terminal domain VC0395_0942 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VC0395_0942 PF03129 Anticodon binding domain VC0395_0942 PF02824 TGS domain VC0395_0942 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VC0395_0947 PF01609 Transposase DDE domain VC0395_0947 PF05598 Transposase domain (DUF772) VC0395_0949 PF08669 Glycine cleavage T-protein C-terminal barrel domain VC0395_0949 PF01571 Aminomethyltransferase folate-binding domain VC0395_0952 PF00464 Serine hydroxymethyltransferase VC0395_0953 PF01597 Glycine cleavage H-protein VC0395_0955 PF02347 Glycine cleavage system P-protein VC0395_0956 PF01797 Transposase IS200 like VC0395_0957 PF00194 Eukaryotic-type carbonic anhydrase VC0395_0960 PF00768 D-alanyl-D-alanine carboxypeptidase VC0395_0960 PF07943 Penicillin-binding protein 5, C-terminal domain VC0395_0962 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_0962 PF00672 HAMP domain VC0395_0962 PF02743 Cache domain VC0395_0963 PF07690 Major Facilitator Superfamily VC0395_0972 PF00512 His Kinase A (phospho-acceptor) domain VC0395_0972 PF13426 PAS domain VC0395_0972 PF00672 HAMP domain VC0395_0972 PF14827 Double sensory domain of two-component sensor kinase VC0395_0972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0973 PF00486 Transcriptional regulatory protein, C terminal VC0395_0973 PF00072 Response regulator receiver domain VC0395_0977 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_0979 PF00128 Alpha amylase, catalytic domain VC0395_0980 PF01292 Prokaryotic cytochrome b561 VC0395_0982 PF00455 DeoR C terminal sensor domain VC0395_0982 PF08220 DeoR-like helix-turn-helix domain VC0395_0983 PF03611 PTS system sugar-specific permease component VC0395_0984 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC0395_0985 PF00596 Class II Aldolase and Adducin N-terminal domain VC0395_0987 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VC0395_0988 PF01261 Xylose isomerase-like TIM barrel VC0395_0990 PF00072 Response regulator receiver domain VC0395_0990 PF00486 Transcriptional regulatory protein, C terminal VC0395_0991 PF00672 HAMP domain VC0395_0991 PF00512 His Kinase A (phospho-acceptor) domain VC0395_0991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_0994 PF00871 Acetokinase family VC0395_0996 PF00593 TonB dependent receptor VC0395_0996 PF07715 TonB-dependent Receptor Plug Domain VC0395_0997 PF12833 Helix-turn-helix domain VC0395_0998 PF00005 ABC transporter VC0395_0999 PF01032 FecCD transport family VC0395_1000 PF01032 FecCD transport family VC0395_1004 PF00801 PKD domain VC0395_1004 PF05547 Immune inhibitor A peptidase M6 VC0395_1005 PF03280 Proteobacterial lipase chaperone protein VC0395_1006 PF00561 alpha/beta hydrolase fold VC0395_1007 PF00672 HAMP domain VC0395_1007 PF12729 Four helix bundle sensory module for signal transduction VC0395_1007 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_1008 PF12563 Hemolytic toxin N terminal VC0395_1008 PF16458 Beta-prism lectin VC0395_1008 PF07968 Leukocidin/Hemolysin toxin family VC0395_1009 PF07968 Leukocidin/Hemolysin toxin family VC0395_1009 PF12563 Hemolytic toxin N terminal VC0395_1009 PF16458 Beta-prism lectin VC0395_1011 PF00657 GDSL-like Lipase/Acylhydrolase VC0395_1013 PF08448 PAS fold VC0395_1013 PF00990 Diguanylate cyclase, GGDEF domain VC0395_1015 PF07690 Major Facilitator Superfamily VC0395_1016 PF03553 Na+/H+ antiporter family VC0395_1018 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_1018 PF00512 His Kinase A (phospho-acceptor) domain VC0395_1018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_1019 PF11849 Domain of unknown function (DUF3369) VC0395_1020 PF01467 Cytidylyltransferase-like VC0395_1021 PF02540 NAD synthase VC0395_1023 PF03605 Anaerobic c4-dicarboxylate membrane transporter VC0395_1024 PF00270 DEAD/DEAH box helicase VC0395_1024 PF00271 Helicase conserved C-terminal domain VC0395_1025 PF01797 Transposase IS200 like VC0395_1029 PF00145 C-5 cytosine-specific DNA methylase VC0395_1030 PF00478 IMP dehydrogenase / GMP reductase domain VC0395_1066 PF05840 Bacteriophage replication gene A protein (GPA) VC0395_1079 PF00589 Phage integrase family VC0395_1079 PF02899 Phage integrase, N-terminal SAM-like domain VC0395_1080 PF00478 IMP dehydrogenase / GMP reductase domain VC0395_1082 PF07885 Ion channel VC0395_1084 PF03853 YjeF-related protein N-terminus VC0395_1084 PF01256 Carbohydrate kinase VC0395_1085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VC0395_1085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC0395_1087 PF00072 Response regulator receiver domain VC0395_1091 PF03889 Alternative ribosome-rescue factor A VC0395_1092 PF00313 'Cold-shock' DNA-binding domain VC0395_1093 PF00970 Oxidoreductase FAD-binding domain VC0395_1093 PF00175 Oxidoreductase NAD-binding domain VC0395_1093 PF00042 Globin VC0395_1095 PF01590 GAF domain VC0395_1095 PF00158 Sigma-54 interaction domain VC0395_1096 PF07687 Peptidase dimerisation domain VC0395_1096 PF01546 Peptidase family M20/M25/M40 VC0395_1098 PF07670 Nucleoside recognition VC0395_1098 PF07662 Na+ dependent nucleoside transporter C-terminus VC0395_1098 PF01773 Na+ dependent nucleoside transporter N-terminus VC0395_1102 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_1102 PF02743 Cache domain VC0395_1102 PF00672 HAMP domain VC0395_1103 PF17863 AAA lid domain VC0395_1103 PF07726 ATPase family associated with various cellular activities (AAA) VC0395_1104 PF01882 Protein of unknown function DUF58 VC0395_1107 PF07584 Aerotolerance regulator N-terminal VC0395_1107 PF13519 von Willebrand factor type A domain VC0395_1111 PF00313 'Cold-shock' DNA-binding domain VC0395_1112 PF00563 EAL domain VC0395_1112 PF00990 Diguanylate cyclase, GGDEF domain VC0395_1112 PF08448 PAS fold VC0395_1114 PF12843 Putative quorum-sensing-regulated virulence factor VC0395_1117 PF01212 Beta-eliminating lyase VC0395_1118 PF03222 Tryptophan/tyrosine permease family VC0395_1119 PF00582 Universal stress protein family VC0395_1121 PF13244 Domain of unknown function (DUF4040) VC0395_1121 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VC0395_1121 PF00361 Proton-conducting membrane transporter VC0395_1121 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VC0395_1125 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VC0395_1126 PF03334 Na+/H+ antiporter subunit VC0395_1127 PF00175 Oxidoreductase NAD-binding domain VC0395_1127 PF00042 Globin VC0395_1127 PF00970 Oxidoreductase FAD-binding domain VC0395_1128 PF01327 Polypeptide deformylase VC0395_1129 PF00041 Fibronectin type III domain VC0395_1129 PF12561 ToxR activated gene A lipoprotein domain VC0395_1130 PF01266 FAD dependent oxidoreductase VC0395_1135 PF00158 Sigma-54 interaction domain VC0395_1135 PF00072 Response regulator receiver domain VC0395_1135 PF02954 Bacterial regulatory protein, Fis family VC0395_1136 PF00512 His Kinase A (phospho-acceptor) domain VC0395_1136 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_1136 PF02743 Cache domain VC0395_A0002 PF04362 Bacterial Fe(2+) trafficking VC0395_A0003 PF00730 HhH-GPD superfamily base excision DNA repair protein VC0395_A0003 PF14815 NUDIX domain VC0395_A0003 PF00633 Helix-hairpin-helix motif VC0395_A0003 PF10576 Iron-sulfur binding domain of endonuclease III VC0395_A0005 PF02390 Putative methyltransferase VC0395_A0006 PF04960 Glutaminase VC0395_A0007 PF06969 HemN C-terminal domain VC0395_A0007 PF04055 Radical SAM superfamily VC0395_A0008 PF01725 Ham1 family VC0395_A0010 PF02594 Uncharacterised ACR, YggU family COG1872 VC0395_A0011 PF02325 YGGT family VC0395_A0012 PF03807 NADP oxidoreductase coenzyme F420-dependent VC0395_A0012 PF14748 Pyrroline-5-carboxylate reductase dimerisation VC0395_A0013 PF01168 Alanine racemase, N-terminal domain VC0395_A0014 PF00437 Type II/IV secretion system protein VC0395_A0015 PF00437 Type II/IV secretion system protein VC0395_A0017 PF01479 S4 domain VC0395_A0017 PF00579 tRNA synthetases class I (W and Y) VC0395_A0018 PF03652 Holliday junction resolvase VC0395_A0019 PF02622 Uncharacterized ACR, COG1678 VC0395_A0020 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VC0395_A0020 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VC0395_A0021 PF04452 RNA methyltransferase VC0395_A0022 PF04231 Endonuclease I VC0395_A0023 PF17283 SprT-like zinc ribbon domain VC0395_A0023 PF10263 SprT-like family VC0395_A0024 PF00438 S-adenosylmethionine synthetase, N-terminal domain VC0395_A0024 PF02772 S-adenosylmethionine synthetase, central domain VC0395_A0024 PF02773 S-adenosylmethionine synthetase, C-terminal domain VC0395_A0026 PF00456 Transketolase, thiamine diphosphate binding domain VC0395_A0026 PF02779 Transketolase, pyrimidine binding domain VC0395_A0026 PF02780 Transketolase, C-terminal domain VC0395_A0027 PF03466 LysR substrate binding domain VC0395_A0027 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A0028 PF07715 TonB-dependent Receptor Plug Domain VC0395_A0028 PF00593 TonB dependent receptor VC0395_A0029 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VC0395_A0029 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC0395_A0030 PF00162 Phosphoglycerate kinase VC0395_A0031 PF01116 Fructose-bisphosphate aldolase class-II VC0395_A0032 PF05552 Conserved TM helix VC0395_A0032 PF00924 Mechanosensitive ion channel VC0395_A0033 PF01810 LysE type translocator VC0395_A0034 PF03466 LysR substrate binding domain VC0395_A0034 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A0035 PF04402 Protein of unknown function (DUF541) VC0395_A0037 PF02887 Pyruvate kinase, alpha/beta domain VC0395_A0037 PF00224 Pyruvate kinase, barrel domain VC0395_A0038 PF00455 DeoR C terminal sensor domain VC0395_A0038 PF08220 DeoR-like helix-turn-helix domain VC0395_A0039 PF01380 SIS domain VC0395_A0040 PF03480 Bacterial extracellular solute-binding protein, family 7 VC0395_A0044 PF03979 Sigma-70 factor, region 1.1 VC0395_A0044 PF04545 Sigma-70, region 4 VC0395_A0044 PF00140 Sigma-70 factor, region 1.2 VC0395_A0044 PF04546 Sigma-70, non-essential region VC0395_A0044 PF04539 Sigma-70 region 3 VC0395_A0044 PF04542 Sigma-70 region 2 VC0395_A0045 PF08278 DNA primase DnaG DnaB-binding VC0395_A0045 PF01807 CHC2 zinc finger VC0395_A0045 PF08275 DNA primase catalytic core, N-terminal domain VC0395_A0045 PF10410 DnaB-helicase binding domain of primase VC0395_A0046 PF09424 Yqey-like protein VC0395_A0047 PF01165 Ribosomal protein S21 VC0395_A0049 PF00814 Glycoprotease family VC0395_A0050 PF00561 alpha/beta hydrolase fold VC0395_A0051 PF02660 Glycerol-3-phosphate acyltransferase VC0395_A0052 PF02152 Dihydroneopterin aldolase VC0395_A0053 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VC0395_A0054 PF02673 Bacitracin resistance protein BacA VC0395_A0055 PF04977 Septum formation initiator VC0395_A0056 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VC0395_A0057 PF02542 YgbB family VC0395_A0058 PF01142 tRNA pseudouridine synthase D (TruD) VC0395_A0059 PF01975 Survival protein SurE VC0395_A0061 PF01551 Peptidase family M23 VC0395_A0061 PF01476 LysM domain VC0395_A0062 PF04545 Sigma-70, region 4 VC0395_A0062 PF04539 Sigma-70 region 3 VC0395_A0062 PF04542 Sigma-70 region 2 VC0395_A0062 PF00140 Sigma-70 factor, region 1.2 VC0395_A0063 PF01624 MutS domain I VC0395_A0063 PF05192 MutS domain III VC0395_A0063 PF05190 MutS family domain IV VC0395_A0063 PF00488 MutS domain V VC0395_A0063 PF05188 MutS domain II VC0395_A0064 PF00291 Pyridoxal-phosphate dependent enzyme VC0395_A0066 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0067 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0068 PF12857 TOBE-like domain VC0395_A0068 PF00005 ABC transporter VC0395_A0069 PF02464 Competence-damaged protein VC0395_A0070 PF00154 recA bacterial DNA recombination protein VC0395_A0071 PF02631 RecX family VC0395_A0072 PF01411 tRNA synthetases class II (A) VC0395_A0072 PF02272 DHHA1 domain VC0395_A0072 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VC0395_A0074 PF00696 Amino acid kinase family VC0395_A0074 PF01842 ACT domain VC0395_A0074 PF13840 ACT domain VC0395_A0075 PF02599 Global regulator protein family VC0395_A0084 PF04277 Oxaloacetate decarboxylase, gamma chain VC0395_A0085 PF02436 Conserved carboxylase domain VC0395_A0085 PF00682 HMGL-like VC0395_A0085 PF00364 Biotin-requiring enzyme VC0395_A0086 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VC0395_A0088 PF09335 SNARE associated Golgi protein VC0395_A0089 PF05193 Peptidase M16 inactive domain VC0395_A0089 PF00675 Insulinase (Peptidase family M16) VC0395_A0090 PF04262 Glutamate-cysteine ligase VC0395_A0091 PF02664 S-Ribosylhomocysteinase (LuxS) VC0395_A0092 PF03471 Transporter associated domain VC0395_A0092 PF01595 Cyclin M transmembrane N-terminal domain VC0395_A0092 PF00571 CBS domain VC0395_A0093 PF01578 Cytochrome C assembly protein VC0395_A0094 PF00448 SRP54-type protein, GTPase domain VC0395_A0094 PF02881 SRP54-type protein, helical bundle domain VC0395_A0094 PF02978 Signal peptide binding domain VC0395_A0095 PF00886 Ribosomal protein S16 VC0395_A0096 PF01782 RimM N-terminal domain VC0395_A0096 PF05239 PRC-barrel domain VC0395_A0097 PF01746 tRNA (Guanine-1)-methyltransferase VC0395_A0098 PF01245 Ribosomal protein L19 VC0395_A0099 PF13180 PDZ domain VC0395_A0100 PF00595 PDZ domain VC0395_A0102 PF03969 AFG1-like ATPase VC0395_A0103 PF00572 Ribosomal protein L13 VC0395_A0104 PF00380 Ribosomal protein S9/S16 VC0395_A0105 PF00355 Rieske [2Fe-2S] domain VC0395_A0105 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VC0395_A0106 PF00033 Cytochrome b/b6/petB VC0395_A0106 PF00032 Cytochrome b(C-terminal)/b6/petD VC0395_A0107 PF02167 Cytochrome C1 family VC0395_A0108 PF02798 Glutathione S-transferase, N-terminal domain VC0395_A0108 PF00043 Glutathione S-transferase, C-terminal domain VC0395_A0109 PF04386 Stringent starvation protein B VC0395_A0110 PF04972 BON domain VC0395_A0111 PF13580 SIS domain VC0395_A0112 PF02021 Uncharacterised protein family UPF0102 VC0395_A0113 PF04348 LppC putative lipoprotein VC0395_A0114 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VC0395_A0115 PF00440 Bacterial regulatory proteins, tetR family VC0395_A0116 PF00440 Bacterial regulatory proteins, tetR family VC0395_A0117 PF00156 Phosphoribosyl transferase domain VC0395_A0118 PF00484 Carbonic anhydrase VC0395_A0119 PF01740 STAS domain VC0395_A0119 PF00916 Sulfate permease family VC0395_A0120 PF00005 ABC transporter VC0395_A0121 PF01061 ABC-2 type transporter VC0395_A0122 PF02569 Pantoate-beta-alanine ligase VC0395_A0123 PF02548 Ketopantoate hydroxymethyltransferase VC0395_A0124 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VC0395_A0125 PF01743 Poly A polymerase head domain VC0395_A0125 PF12627 Probable RNA and SrmB- binding site of polymerase A VC0395_A0125 PF12626 Polymerase A arginine-rich C-terminus VC0395_A0126 PF00749 tRNA synthetases class I (E and Q), catalytic domain VC0395_A0127 PF01258 Prokaryotic dksA/traR C4-type zinc finger VC0395_A0128 PF17746 SfsA N-terminal OB domain VC0395_A0128 PF03749 Sugar fermentation stimulation protein RE domain VC0395_A0130 PF08482 ATP-dependent helicase C-terminal VC0395_A0130 PF00271 Helicase conserved C-terminal domain VC0395_A0130 PF04408 Helicase associated domain (HA2) VC0395_A0130 PF00270 DEAD/DEAH box helicase VC0395_A0131 PF00912 Transglycosylase VC0395_A0131 PF00905 Penicillin binding protein transpeptidase domain VC0395_A0131 PF14814 Bifunctional transglycosylase second domain VC0395_A0132 PF01734 Patatin-like phospholipase VC0395_A0133 PF11791 Aconitate B N-terminal domain VC0395_A0133 PF06434 Aconitate hydratase 2 N-terminus VC0395_A0133 PF00330 Aconitase family (aconitate hydratase) VC0395_A0134 PF06062 Uncharacterised protein family (UPF0231) VC0395_A0135 PF00543 Nitrogen regulatory protein P-II VC0395_A0136 PF00909 Ammonium Transporter Family VC0395_A0137 PF13416 Bacterial extracellular solute-binding protein VC0395_A0139 PF08402 TOBE domain VC0395_A0139 PF00005 ABC transporter VC0395_A0140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC0395_A0140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC0395_A0140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC0395_A0141 PF06165 Glycosyltransferase family 36 VC0395_A0141 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VC0395_A0142 PF02838 Glycosyl hydrolase family 20, domain 2 VC0395_A0142 PF00728 Glycosyl hydrolase family 20, catalytic domain VC0395_A0143 PF01869 BadF/BadG/BcrA/BcrD ATPase family VC0395_A0145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_A0145 PF00005 ABC transporter VC0395_A0146 PF00005 ABC transporter VC0395_A0146 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_A0147 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0147 PF12911 N-terminal TM domain of oligopeptide transport permease C VC0395_A0148 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0149 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC0395_A0150 PF09308 LuxQ, periplasmic VC0395_A0150 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0150 PF00072 Response regulator receiver domain VC0395_A0151 PF05175 Methyltransferase small domain VC0395_A0151 PF08468 Methyltransferase small domain N-terminal VC0395_A0152 PF01594 AI-2E family transporter VC0395_A0154 PF00202 Aminotransferase class-III VC0395_A0156 PF01521 Iron-sulphur cluster biosynthesis VC0395_A0158 PF00873 AcrB/AcrD/AcrF family VC0395_A0159 PF04225 Opacity-associated protein A LysM-like domain VC0395_A0159 PF01551 Peptidase family M23 VC0395_A0160 PF00579 tRNA synthetases class I (W and Y) VC0395_A0160 PF01479 S4 domain VC0395_A0161 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VC0395_A0162 PF13609 Gram-negative porin VC0395_A0163 PF01272 Transcription elongation factor, GreA/GreB, C-term VC0395_A0163 PF03449 Transcription elongation factor, N-terminal VC0395_A0164 PF01985 CRS1 / YhbY (CRM) domain VC0395_A0165 PF01728 FtsJ-like methyltransferase VC0395_A0166 PF06480 FtsH Extracellular VC0395_A0166 PF01434 Peptidase family M41 VC0395_A0166 PF17862 AAA+ lid domain VC0395_A0166 PF00004 ATPase family associated with various cellular activities (AAA) VC0395_A0167 PF00809 Pterin binding enzyme VC0395_A0168 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC0395_A0168 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VC0395_A0168 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC0395_A0168 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC0395_A0169 PF03840 Preprotein translocase SecG subunit VC0395_A0172 PF17384 RimP C-terminal SH3 domain VC0395_A0172 PF02576 RimP N-terminal domain VC0395_A0173 PF08529 NusA N-terminal domain VC0395_A0173 PF00575 S1 RNA binding domain VC0395_A0173 PF13184 NusA-like KH domain VC0395_A0174 PF08364 Bacterial translation initiation factor IF-2 associated region VC0395_A0174 PF00009 Elongation factor Tu GTP binding domain VC0395_A0174 PF11987 Translation-initiation factor 2 VC0395_A0174 PF04760 Translation initiation factor IF-2, N-terminal region VC0395_A0175 PF02033 Ribosome-binding factor A VC0395_A0176 PF09157 Pseudouridine synthase II TruB, C-terminal VC0395_A0176 PF16198 tRNA pseudouridylate synthase B C-terminal domain VC0395_A0176 PF01509 TruB family pseudouridylate synthase (N terminal domain) VC0395_A0177 PF00312 Ribosomal protein S15 VC0395_A0178 PF00013 KH domain VC0395_A0178 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VC0395_A0178 PF03725 3' exoribonuclease family, domain 2 VC0395_A0178 PF01138 3' exoribonuclease family, domain 1 VC0395_A0178 PF00575 S1 RNA binding domain VC0395_A0179 PF13181 Tetratricopeptide repeat VC0395_A0179 PF07719 Tetratricopeptide repeat VC0395_A0184 PF03707 Bacterial signalling protein N terminal repeat VC0395_A0184 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0184 PF00563 EAL domain VC0395_A0186 PF13508 Acetyltransferase (GNAT) domain VC0395_A0188 PF03707 Bacterial signalling protein N terminal repeat VC0395_A0188 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0188 PF00563 EAL domain VC0395_A0190 PF03144 Elongation factor Tu domain 2 VC0395_A0190 PF00009 Elongation factor Tu GTP binding domain VC0395_A0190 PF16658 Class II release factor RF3, C-terminal domain VC0395_A0191 PF00270 DEAD/DEAH box helicase VC0395_A0191 PF00271 Helicase conserved C-terminal domain VC0395_A0192 PF05175 Methyltransferase small domain VC0395_A0193 PF05525 Branched-chain amino acid transport protein VC0395_A0194 PF00472 RF-1 domain VC0395_A0194 PF03462 PCRF domain VC0395_A0195 PF00152 tRNA synthetases class II (D, K and N) VC0395_A0195 PF01336 OB-fold nucleic acid binding domain VC0395_A0196 PF00158 Sigma-54 interaction domain VC0395_A0196 PF02954 Bacterial regulatory protein, Fis family VC0395_A0196 PF00072 Response regulator receiver domain VC0395_A0199 PF00248 Aldo/keto reductase family VC0395_A0200 PF02976 DNA mismatch repair enzyme MutH VC0395_A0203 PF00293 NUDIX domain VC0395_A0204 PF01590 GAF domain VC0395_A0204 PF00391 PEP-utilising enzyme, mobile domain VC0395_A0204 PF02896 PEP-utilising enzyme, TIM barrel domain VC0395_A0204 PF05524 PEP-utilising enzyme, N-terminal VC0395_A0205 PF01925 Sulfite exporter TauE/SafE VC0395_A0206 PF01790 Prolipoprotein diacylglyceryl transferase VC0395_A0207 PF00303 Thymidylate synthase VC0395_A0208 PF02690 Na+/Pi-cotransporter VC0395_A0209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A0209 PF03466 LysR substrate binding domain VC0395_A0210 PF01022 Bacterial regulatory protein, arsR family VC0395_A0211 PF01649 Ribosomal protein S20 VC0395_A0212 PF03023 Lipid II flippase MurJ VC0395_A0213 PF06574 FAD synthetase VC0395_A0213 PF01687 Riboflavin kinase VC0395_A0214 PF00133 tRNA synthetases class I (I, L, M and V) VC0395_A0214 PF06827 Zinc finger found in FPG and IleRS VC0395_A0214 PF08264 Anticodon-binding domain of tRNA VC0395_A0215 PF01252 Signal peptidase (SPase) II VC0395_A0216 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC0395_A0217 PF02401 LytB protein VC0395_A0218 PF02554 Carbon starvation protein CstA VC0395_A0221 PF13580 SIS domain VC0395_A0222 PF03702 Anhydro-N-acetylmuramic acid kinase VC0395_A0223 PF00933 Glycosyl hydrolase family 3 N terminal domain VC0395_A0224 PF00072 Response regulator receiver domain VC0395_A0224 PF04397 LytTr DNA-binding domain VC0395_A0225 PF06580 Histidine kinase VC0395_A0225 PF07694 5TMR of 5TMR-LYT VC0395_A0226 PF00793 DAHP synthetase I family VC0395_A0227 PF02153 Prephenate dehydrogenase VC0395_A0227 PF01817 Chorismate mutase type II VC0395_A0228 PF07238 PilZ domain VC0395_A0229 PF12848 ABC transporter VC0395_A0229 PF00005 ABC transporter VC0395_A0230 PF14718 Soluble lytic murein transglycosylase L domain VC0395_A0230 PF01464 Transglycosylase SLT domain VC0395_A0231 PF01371 Trp repressor protein VC0395_A0232 PF01931 Protein of unknown function DUF84 VC0395_A0233 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0233 PF00563 EAL domain VC0395_A0234 PF13416 Bacterial extracellular solute-binding protein VC0395_A0235 PF00800 Prephenate dehydratase VC0395_A0235 PF01817 Chorismate mutase type II VC0395_A0236 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VC0395_A0237 PF13525 Outer membrane lipoprotein VC0395_A0238 PF00849 RNA pseudouridylate synthase VC0395_A0238 PF01479 S4 domain VC0395_A0240 PF10431 C-terminal, D2-small domain, of ClpB protein VC0395_A0240 PF02861 Clp amino terminal domain, pathogenicity island component VC0395_A0240 PF17871 AAA lid domain VC0395_A0240 PF07724 AAA domain (Cdc48 subfamily) VC0395_A0240 PF00004 ATPase family associated with various cellular activities (AAA) VC0395_A0249 PF00881 Nitroreductase family VC0395_A0250 PF00037 4Fe-4S binding domain VC0395_A0252 PF04381 Putative exonuclease, RdgC VC0395_A0253 PF00072 Response regulator receiver domain VC0395_A0253 PF00486 Transcriptional regulatory protein, C terminal VC0395_A0254 PF11808 Phosphate regulon sensor protein PhoR VC0395_A0254 PF00989 PAS fold VC0395_A0254 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0255 PF12849 PBP superfamily domain VC0395_A0256 PF02541 Ppx/GppA phosphatase family VC0395_A0257 PF02503 Polyphosphate kinase middle domain VC0395_A0257 PF13090 Polyphosphate kinase C-terminal domain 2 VC0395_A0257 PF17941 Polyphosphate kinase C-terminal domain 1 VC0395_A0257 PF13089 Polyphosphate kinase N-terminal domain VC0395_A0258 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0259 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0260 PF00005 ABC transporter VC0395_A0261 PF01895 PhoU domain VC0395_A0262 PF03976 Polyphosphate kinase 2 (PPK2) VC0395_A0263 PF03932 CutC family VC0395_A0264 PF00578 AhpC/TSA family VC0395_A0264 PF10417 C-terminal domain of 1-Cys peroxiredoxin VC0395_A0265 PF03466 LysR substrate binding domain VC0395_A0265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A0266 PF01274 Malate synthase VC0395_A0267 PF00463 Isocitrate lyase family VC0395_A0268 PF00571 CBS domain VC0395_A0269 PF02547 Queuosine biosynthesis protein VC0395_A0270 PF01702 Queuine tRNA-ribosyltransferase VC0395_A0271 PF02699 Preprotein translocase subunit VC0395_A0272 PF07549 SecD/SecF GG Motif VC0395_A0272 PF13721 SecD export protein N-terminal TM region VC0395_A0272 PF02355 Protein export membrane protein VC0395_A0273 PF07549 SecD/SecF GG Motif VC0395_A0273 PF02355 Protein export membrane protein VC0395_A0274 PF00459 Inositol monophosphatase family VC0395_A0275 PF00588 SpoU rRNA Methylase family VC0395_A0276 PF02082 Transcriptional regulator VC0395_A0277 PF00266 Aminotransferase class-V VC0395_A0278 PF01592 NifU-like N terminal domain VC0395_A0279 PF01521 Iron-sulphur cluster biosynthesis VC0395_A0280 PF07743 HSCB C-terminal oligomerisation domain VC0395_A0280 PF00226 DnaJ domain VC0395_A0281 PF00012 Hsp70 protein VC0395_A0282 PF00111 2Fe-2S iron-sulfur cluster binding domain VC0395_A0283 PF04384 Iron-sulphur cluster assembly VC0395_A0284 PF00883 Cytosol aminopeptidase family, catalytic domain VC0395_A0284 PF12404 Peptidase VC0395_A0285 PF00334 Nucleoside diphosphate kinase VC0395_A0286 PF04055 Radical SAM superfamily VC0395_A0287 PF13464 Domain of unknown function (DUF4115) VC0395_A0288 PF04551 GcpE protein VC0395_A0289 PF03129 Anticodon binding domain VC0395_A0289 PF13393 Histidyl-tRNA synthetase VC0395_A0290 PF09976 Tetratricopeptide repeat-like domain VC0395_A0291 PF13360 PQQ-like domain VC0395_A0292 PF01926 50S ribosome-binding GTPase VC0395_A0292 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VC0395_A0294 PF13742 OB-fold nucleic acid binding domain VC0395_A0294 PF02601 Exonuclease VII, large subunit VC0395_A0296 PF00571 CBS domain VC0395_A0296 PF00478 IMP dehydrogenase / GMP reductase domain VC0395_A0297 PF02540 NAD synthase VC0395_A0297 PF00958 GMP synthase C terminal domain VC0395_A0297 PF00117 Glutamine amidotransferase class-I VC0395_A0298 PF06483 Chitinase C VC0395_A0298 PF00704 Glycosyl hydrolases family 18 VC0395_A0299 PF01184 GPR1/FUN34/yaaH family VC0395_A0300 PF00857 Isochorismatase family VC0395_A0300 PF00550 Phosphopantetheine attachment site VC0395_A0301 PF13193 AMP-binding enzyme C-terminal domain VC0395_A0301 PF00501 AMP-binding enzyme VC0395_A0302 PF00425 chorismate binding enzyme VC0395_A0305 PF01497 Periplasmic binding protein VC0395_A0306 PF01032 FecCD transport family VC0395_A0307 PF01032 FecCD transport family VC0395_A0308 PF00005 ABC transporter VC0395_A0309 PF01648 4'-phosphopantetheinyl transferase superfamily VC0395_A0309 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VC0395_A0310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A0310 PF03466 LysR substrate binding domain VC0395_A0311 PF00753 Metallo-beta-lactamase superfamily VC0395_A0311 PF14864 Alkyl sulfatase C-terminal VC0395_A0311 PF14863 Alkyl sulfatase dimerisation VC0395_A0312 PF01235 Sodium:alanine symporter family VC0395_A0313 PF01266 FAD dependent oxidoreductase VC0395_A0314 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A0314 PF03466 LysR substrate binding domain VC0395_A0317 PF12431 Transcriptional regulator VC0395_A0317 PF00072 Response regulator receiver domain VC0395_A0318 PF17203 Single cache domain 3 VC0395_A0318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0319 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VC0395_A0320 PF00682 HMGL-like VC0395_A0320 PF00364 Biotin-requiring enzyme VC0395_A0320 PF02436 Conserved carboxylase domain VC0395_A0321 PF04277 Oxaloacetate decarboxylase, gamma chain VC0395_A0322 PF03390 2-hydroxycarboxylate transporter family VC0395_A0323 PF08218 Citrate lyase ligase C-terminal domain VC0395_A0324 PF06857 Malonate decarboxylase delta subunit (MdcD) VC0395_A0325 PF03328 HpcH/HpaI aldolase/citrate lyase family VC0395_A0326 PF04223 Citrate lyase, alpha subunit (CitF) VC0395_A0327 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VC0395_A0328 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VC0395_A0330 PF08032 RNA 2'-O ribose methyltransferase substrate binding VC0395_A0330 PF00588 SpoU rRNA Methylase family VC0395_A0331 PF00037 4Fe-4S binding domain VC0395_A0331 PF11953 Domain of unknown function (DUF3470) VC0395_A0342 PF13737 Transposase DDE domain VC0395_A0343 PF13737 Transposase DDE domain VC0395_A0344 PF00171 Aldehyde dehydrogenase family VC0395_A0345 PF00041 Fibronectin type III domain VC0395_A0345 PF12561 ToxR activated gene A lipoprotein domain VC0395_A0349 PF08534 Redoxin VC0395_A0350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A0351 PF00486 Transcriptional regulatory protein, C terminal VC0395_A0353 PF05946 Toxin-coregulated pilus subunit TcpA VC0395_A0353 PF07963 Prokaryotic N-terminal methylation motif VC0395_A0355 PF10671 Toxin co-regulated pilus biosynthesis protein Q VC0395_A0359 PF17456 Toxin-coregulated pilus protein S VC0395_A0360 PF00437 Type II/IV secretion system protein VC0395_A0361 PF00482 Type II secretion system (T2SS), protein F VC0395_A0362 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F VC0395_A0363 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family VC0395_A0364 PF01478 Type IV leader peptidase family VC0395_A0364 PF06750 Bacterial Peptidase A24 N-terminal domain VC0395_A0365 PF00672 HAMP domain VC0395_A0365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A0365 PF02743 Cache domain VC0395_A0367 PF04225 Opacity-associated protein A LysM-like domain VC0395_A0367 PF01551 Peptidase family M23 VC0395_A0369 PF13402 Peptidase M60, enhancin and enhancin-like VC0395_A0369 PF13322 Domain of unknown function (DUF4092) VC0395_A0369 PF17291 N-terminal domain of M60-like peptidases VC0395_A0370 PF13322 Domain of unknown function (DUF4092) VC0395_A0370 PF13402 Peptidase M60, enhancin and enhancin-like VC0395_A0370 PF17291 N-terminal domain of M60-like peptidases VC0395_A0372 PF13356 Arm DNA-binding domain VC0395_A0372 PF00589 Phage integrase family VC0395_A0374 PF01668 SmpB protein VC0395_A0375 PF03364 Polyketide cyclase / dehydrase and lipid transport VC0395_A0376 PF03658 RnfH family Ubiquitin VC0395_A0377 PF04355 SmpA / OmlA family VC0395_A0378 PF02463 RecF/RecN/SMC N terminal domain VC0395_A0379 PF01513 ATP-NAD kinase VC0395_A0381 PF01025 GrpE VC0395_A0382 PF00012 Hsp70 protein VC0395_A0383 PF00684 DnaJ central domain VC0395_A0383 PF00226 DnaJ domain VC0395_A0383 PF01556 DnaJ C terminal domain VC0395_A0384 PF07963 Prokaryotic N-terminal methylation motif VC0395_A0384 PF00114 Pilin (bacterial filament) VC0395_A0385 PF14245 Type IV pilin PilA VC0395_A0385 PF07963 Prokaryotic N-terminal methylation motif VC0395_A0389 PF03806 AbgT putative transporter family VC0395_A0390 PF14437 MafB19-like deaminase VC0395_A0392 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_A0392 PF01464 Transglycosylase SLT domain VC0395_A0395 PF02769 AIR synthase related protein, C-terminal domain VC0395_A0395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VC0395_A0395 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VC0395_A0396 PF01797 Transposase IS200 like VC0395_A0398 PF06786 Uncharacterised protein family (UPF0253) VC0395_A0400 PF03129 Anticodon binding domain VC0395_A0400 PF04073 Aminoacyl-tRNA editing domain VC0395_A0400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VC0395_A0401 PF18389 TrmO C-terminal domain VC0395_A0401 PF01980 tRNA-methyltransferase O VC0395_A0402 PF01197 Ribosomal protein L31 VC0395_A0403 PF00444 Ribosomal protein L36 VC0395_A0404 PF03806 AbgT putative transporter family VC0395_A0405 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VC0395_A0408 PF13302 Acetyltransferase (GNAT) domain VC0395_A0410 PF04287 tRNA pseudouridine synthase C VC0395_A0411 PF00849 RNA pseudouridylate synthase VC0395_A0412 PF02780 Transketolase, C-terminal domain VC0395_A0412 PF02779 Transketolase, pyrimidine binding domain VC0395_A0412 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VC0395_A0413 PF00348 Polyprenyl synthetase VC0395_A0414 PF02609 Exonuclease VII small subunit VC0395_A0415 PF01618 MotA/TolQ/ExbB proton channel family VC0395_A0416 PF00691 OmpA family VC0395_A0416 PF13677 Membrane MotB of proton-channel complex MotA/MotB VC0395_A0417 PF02568 Thiamine biosynthesis protein (ThiI) VC0395_A0417 PF02926 THUMP domain VC0395_A0418 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A0418 PF03466 LysR substrate binding domain VC0395_A0419 PF04241 Protein of unknown function (DUF423) VC0395_A0420 PF01367 5'-3' exonuclease, C-terminal SAM fold VC0395_A0420 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VC0395_A0421 PF03641 Possible lysine decarboxylase VC0395_A0421 PF11892 Domain of unknown function (DUF3412) VC0395_A0421 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VC0395_A0422 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0424 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VC0395_A0424 PF14489 QueF-like protein VC0395_A0425 PF07348 Syd protein (SUKH-2) VC0395_A0426 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VC0395_A0427 PF03180 NLPA lipoprotein VC0395_A0428 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0429 PF09383 NIL domain VC0395_A0429 PF00005 ABC transporter VC0395_A0431 PF00356 Bacterial regulatory proteins, lacI family VC0395_A0432 PF00367 phosphotransferase system, EIIB VC0395_A0432 PF02378 Phosphotransferase system, EIIC VC0395_A0433 PF16657 Maltogenic Amylase, C-terminal domain VC0395_A0433 PF00128 Alpha amylase, catalytic domain VC0395_A0438 PF13533 Biotin-lipoyl like VC0395_A0439 PF00873 AcrB/AcrD/AcrF family VC0395_A0440 PF01451 Low molecular weight phosphotyrosine protein phosphatase VC0395_A0441 PF02350 UDP-N-acetylglucosamine 2-epimerase VC0395_A0442 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VC0395_A0442 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VC0395_A0442 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VC0395_A0443 PF12464 Maltose acetyltransferase VC0395_A0443 PF14602 Hexapeptide repeat of succinyl-transferase VC0395_A0448 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_A0450 PF00862 Sucrose synthase VC0395_A0450 PF00534 Glycosyl transferases group 1 VC0395_A0452 PF03808 Glycosyl transferase WecB/TagA/CpsF family VC0395_A0455 PF12561 ToxR activated gene A lipoprotein domain VC0395_A0455 PF17945 Beta/Gamma crystallin VC0395_A0458 PF02397 Bacterial sugar transferase VC0395_A0460 PF10531 SLBB domain VC0395_A0460 PF02563 Polysaccharide biosynthesis/export protein VC0395_A0460 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VC0395_A0461 PF02706 Chain length determinant protein VC0395_A0461 PF13807 G-rich domain on putative tyrosine kinase VC0395_A0461 PF13614 AAA domain VC0395_A0465 PF00464 Serine hydroxymethyltransferase VC0395_A0467 PF04055 Radical SAM superfamily VC0395_A0467 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VC0395_A0468 PF03099 Biotin/lipoate A/B protein ligase family VC0395_A0469 PF04359 Protein of unknown function (DUF493) VC0395_A0470 PF07943 Penicillin-binding protein 5, C-terminal domain VC0395_A0470 PF00768 D-alanyl-D-alanine carboxypeptidase VC0395_A0471 PF05036 Sporulation related domain VC0395_A0471 PF03330 Lytic transglycolase VC0395_A0472 PF01098 Cell cycle protein VC0395_A0473 PF03717 Penicillin-binding Protein dimerisation domain VC0395_A0473 PF00905 Penicillin binding protein transpeptidase domain VC0395_A0474 PF02590 Predicted SPOUT methyltransferase VC0395_A0476 PF06144 DNA polymerase III, delta subunit VC0395_A0476 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VC0395_A0477 PF04390 Lipopolysaccharide-assembly VC0395_A0478 PF08264 Anticodon-binding domain of tRNA VC0395_A0478 PF13603 Leucyl-tRNA synthetase, Domain 2 VC0395_A0478 PF00133 tRNA synthetases class I (I, L, M and V) VC0395_A0479 PF07295 Zinc-ribbon containing domain VC0395_A0480 PF00795 Carbon-nitrogen hydrolase VC0395_A0481 PF00571 CBS domain VC0395_A0481 PF03471 Transporter associated domain VC0395_A0482 PF02130 Uncharacterized protein family UPF0054 VC0395_A0483 PF02562 PhoH-like protein VC0395_A0484 PF04055 Radical SAM superfamily VC0395_A0484 PF01938 TRAM domain VC0395_A0484 PF00919 Uncharacterized protein family UPF0004 VC0395_A0485 PF01494 FAD binding domain VC0395_A0486 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VC0395_A0487 PF05524 PEP-utilising enzyme, N-terminal VC0395_A0487 PF00391 PEP-utilising enzyme, mobile domain VC0395_A0487 PF02896 PEP-utilising enzyme, TIM barrel domain VC0395_A0488 PF00381 PTS HPr component phosphorylation site VC0395_A0489 PF00291 Pyridoxal-phosphate dependent enzyme VC0395_A0491 PF04354 ZipA, C-terminal FtsZ-binding domain VC0395_A0492 PF12826 Helix-hairpin-helix motif VC0395_A0492 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VC0395_A0492 PF03120 NAD-dependent DNA ligase OB-fold domain VC0395_A0492 PF00533 BRCA1 C Terminus (BRCT) domain VC0395_A0492 PF01653 NAD-dependent DNA ligase adenylation domain VC0395_A0493 PF13609 Gram-negative porin VC0395_A0495 PF13411 MerR HTH family regulatory protein VC0395_A0496 PF01957 NfeD-like C-terminal, partner-binding VC0395_A0497 PF16200 C-terminal region of band_7 VC0395_A0497 PF01145 SPFH domain / Band 7 family VC0395_A0498 PF00085 Thioredoxin VC0395_A0500 PF00106 short chain dehydrogenase VC0395_A0501 PF01370 NAD dependent epimerase/dehydratase family VC0395_A0501 PF08338 Domain of unknown function (DUF1731) VC0395_A0502 PF12850 Calcineurin-like phosphoesterase superfamily domain VC0395_A0504 PF17323 Trans-membrane regulatory protein ToxS VC0395_A0505 PF00486 Transcriptional regulatory protein, C terminal VC0395_A0506 PF00183 Hsp90 protein VC0395_A0506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0507 PF05191 Adenylate kinase, active site lid VC0395_A0508 PF00762 Ferrochelatase VC0395_A0509 PF00854 POT family VC0395_A0511 PF02357 Transcription termination factor nusG VC0395_A0512 PF00733 Asparagine synthase VC0395_A0512 PF13537 Glutamine amidotransferase domain VC0395_A0513 PF02254 TrkA-N domain VC0395_A0513 PF00999 Sodium/hydrogen exchanger family VC0395_A0514 PF01047 MarR family VC0395_A0514 PF00480 ROK family VC0395_A0515 PF01979 Amidohydrolase family VC0395_A0516 PF02378 Phosphotransferase system, EIIC VC0395_A0516 PF00367 phosphotransferase system, EIIB VC0395_A0516 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VC0395_A0517 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VC0395_A0517 PF00749 tRNA synthetases class I (E and Q), catalytic domain VC0395_A0520 PF01416 tRNA pseudouridine synthase VC0395_A0521 PF17848 Acetyl-coA carboxylase zinc finger domain VC0395_A0521 PF01039 Carboxyl transferase domain VC0395_A0522 PF02875 Mur ligase family, glutamate ligase domain VC0395_A0522 PF08245 Mur ligase middle domain VC0395_A0523 PF05036 Sporulation related domain VC0395_A0524 PF02674 Colicin V production protein VC0395_A0525 PF00156 Phosphoribosyl transferase domain VC0395_A0526 PF03553 Na+/H+ antiporter family VC0395_A0526 PF13726 Na+-H+ antiporter family VC0395_A0527 PF00929 Exonuclease VC0395_A0529 PF18393 MotY N-terminal domain VC0395_A0529 PF00691 OmpA family VC0395_A0530 PF10952 Protein of unknown function (DUF2753) VC0395_A0531 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC0395_A0532 PF00730 HhH-GPD superfamily base excision DNA repair protein VC0395_A0532 PF00633 Helix-hairpin-helix motif VC0395_A0532 PF10576 Iron-sulfur binding domain of endonuclease III VC0395_A0533 PF02508 Rnf-Nqr subunit, membrane protein VC0395_A0534 PF04205 FMN-binding domain VC0395_A0535 PF03116 NQR2, RnfD, RnfE family VC0395_A0536 PF12838 4Fe-4S dicluster domain VC0395_A0536 PF13375 RnfC Barrel sandwich hybrid domain VC0395_A0536 PF10531 SLBB domain VC0395_A0536 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VC0395_A0537 PF04060 Putative Fe-S cluster VC0395_A0538 PF02508 Rnf-Nqr subunit, membrane protein VC0395_A0540 PF17757 UvrB interaction domain VC0395_A0540 PF12344 Ultra-violet resistance protein B VC0395_A0540 PF02151 UvrB/uvrC motif VC0395_A0540 PF00271 Helicase conserved C-terminal domain VC0395_A0540 PF04851 Type III restriction enzyme, res subunit VC0395_A0541 PF02954 Bacterial regulatory protein, Fis family VC0395_A0541 PF00072 Response regulator receiver domain VC0395_A0541 PF00158 Sigma-54 interaction domain VC0395_A0542 PF01933 Uncharacterised protein family UPF0052 VC0395_A0543 PF01627 Hpt domain VC0395_A0544 PF06463 Molybdenum Cofactor Synthesis C VC0395_A0544 PF04055 Radical SAM superfamily VC0395_A0545 PF00994 Probable molybdopterin binding domain VC0395_A0546 PF01967 MoaC family VC0395_A0547 PF02597 ThiS family VC0395_A0548 PF02391 MoaE protein VC0395_A0549 PF07694 5TMR of 5TMR-LYT VC0395_A0549 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0550 PF07085 DRTGG domain VC0395_A0550 PF03061 Thioesterase superfamily VC0395_A0550 PF00392 Bacterial regulatory proteins, gntR family VC0395_A0550 PF00571 CBS domain VC0395_A0551 PF00403 Heavy-metal-associated domain VC0395_A0552 PF01048 Phosphorylase superfamily VC0395_A0554 PF09334 tRNA synthetases class I (M) VC0395_A0554 PF01588 Putative tRNA binding domain VC0395_A0555 PF10609 NUBPL iron-transfer P-loop NTPase VC0395_A0556 PF00485 Phosphoribulokinase / Uridine kinase family VC0395_A0557 PF05170 AsmA family VC0395_A0558 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VC0395_A0558 PF12557 Cob(I)alamin adenosyltransferase N terminal VC0395_A0559 PF01451 Low molecular weight phosphotyrosine protein phosphatase VC0395_A0560 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VC0395_A0561 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VC0395_A0563 PF04542 Sigma-70 region 2 VC0395_A0563 PF08281 Sigma-70, region 4 VC0395_A0564 PF02803 Thiolase, C-terminal domain VC0395_A0564 PF00108 Thiolase, N-terminal domain VC0395_A0565 PF00378 Enoyl-CoA hydratase/isomerase VC0395_A0565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VC0395_A0565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VC0395_A0566 PF00881 Nitroreductase family VC0395_A0567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A0567 PF03466 LysR substrate binding domain VC0395_A0568 PF00072 Response regulator receiver domain VC0395_A0570 PF04304 Protein of unknown function (DUF454) VC0395_A0571 PF00156 Phosphoribosyl transferase domain VC0395_A0572 PF12170 DNA polymerase III tau subunit V interacting with alpha VC0395_A0572 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VC0395_A0572 PF12169 DNA polymerase III subunits gamma and tau domain III VC0395_A0573 PF02575 YbaB/EbfC DNA-binding family VC0395_A0574 PF02132 RecR protein VC0395_A0574 PF13662 Toprim domain VC0395_A0575 PF03692 Putative zinc- or iron-chelating domain VC0395_A0576 PF03692 Putative zinc- or iron-chelating domain VC0395_A0577 PF00106 short chain dehydrogenase VC0395_A0578 PF01343 Peptidase family S49 VC0395_A0578 PF08496 Peptidase family S49 N-terminal VC0395_A0579 PF00291 Pyridoxal-phosphate dependent enzyme VC0395_A0580 PF13404 AsnC-type helix-turn-helix domain VC0395_A0580 PF01037 Lrp/AsnC ligand binding domain VC0395_A0583 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VC0395_A0585 PF08448 PAS fold VC0395_A0585 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0586 PF01022 Bacterial regulatory protein, arsR family VC0395_A0587 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VC0395_A0587 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC0395_A0592 PF06483 Chitinase C VC0395_A0592 PF00704 Glycosyl hydrolases family 18 VC0395_A0594 PF01161 Phosphatidylethanolamine-binding protein VC0395_A0598 PF01300 Telomere recombination VC0395_A0598 PF03481 Putative GTP-binding controlling metal-binding VC0395_A0601 PF00072 Response regulator receiver domain VC0395_A0603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0603 PF13426 PAS domain VC0395_A0603 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0603 PF00989 PAS fold VC0395_A0603 PF13188 PAS domain VC0395_A0604 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0605 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0605 PF00563 EAL domain VC0395_A0605 PF13188 PAS domain VC0395_A0605 PF03707 Bacterial signalling protein N terminal repeat VC0395_A0606 PF02954 Bacterial regulatory protein, Fis family VC0395_A0606 PF00158 Sigma-54 interaction domain VC0395_A0606 PF00072 Response regulator receiver domain VC0395_A0607 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0607 PF08448 PAS fold VC0395_A0607 PF00072 Response regulator receiver domain VC0395_A0607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0607 PF13188 PAS domain VC0395_A0609 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC0395_A0610 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0611 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0611 PF12911 N-terminal TM domain of oligopeptide transport permease C VC0395_A0612 PF00005 ABC transporter VC0395_A0612 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_A0613 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_A0613 PF00005 ABC transporter VC0395_A0614 PF13409 Glutathione S-transferase, N-terminal domain VC0395_A0615 PF01515 Phosphate acetyl/butaryl transferase VC0395_A0615 PF07085 DRTGG domain VC0395_A0616 PF00871 Acetokinase family VC0395_A0617 PF04217 Protein of unknown function, DUF412 VC0395_A0618 PF09905 DNA-binding protein VF530 VC0395_A0620 PF02653 Branched-chain amino acid transport system / permease component VC0395_A0621 PF00005 ABC transporter VC0395_A0622 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0623 PF01207 Dihydrouridine synthase (Dus) VC0395_A0624 PF01207 Dihydrouridine synthase (Dus) VC0395_A0625 PF07517 SecA DEAD-like domain VC0395_A0625 PF01043 SecA preprotein cross-linking domain VC0395_A0625 PF07516 SecA Wing and Scaffold domain VC0395_A0625 PF02810 SEC-C motif VC0395_A0626 PF03548 Outer membrane lipoprotein carrier protein LolA VC0395_A0627 PF12002 MgsA AAA+ ATPase C terminal VC0395_A0627 PF16193 AAA C-terminal domain VC0395_A0627 PF00004 ATPase family associated with various cellular activities (AAA) VC0395_A0628 PF02403 Seryl-tRNA synthetase N-terminal domain VC0395_A0628 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VC0395_A0629 PF00202 Aminotransferase class-III VC0395_A0630 PF04055 Radical SAM superfamily VC0395_A0630 PF06968 Biotin and Thiamin Synthesis associated domain VC0395_A0631 PF00155 Aminotransferase class I and II VC0395_A0632 PF08241 Methyltransferase domain VC0395_A0635 PF01435 Peptidase family M48 VC0395_A0637 PF00106 short chain dehydrogenase VC0395_A0642 PF16036 Chalcone isomerase-like VC0395_A0644 PF00206 Lyase VC0395_A0644 PF08328 Adenylosuccinate lyase C-terminal VC0395_A0645 PF04356 Protein of unknown function (DUF489) VC0395_A0647 PF00294 pfkB family carbohydrate kinase VC0395_A0649 PF13693 Winged helix-turn-helix DNA-binding VC0395_A0650 PF02914 Bacteriophage Mu transposase VC0395_A0650 PF09299 Mu transposase, C-terminal VC0395_A0650 PF09039 Mu DNA binding, I gamma subdomain VC0395_A0650 PF02316 Mu DNA-binding domain VC0395_A0651 PF09077 Mu B transposition protein, C terminal VC0395_A0651 PF13401 AAA domain VC0395_A0671 PF08461 Ribonuclease R winged-helix domain VC0395_A0672 PF11985 Protein of unknown function (DUF3486) VC0395_A0673 PF03237 Terminase-like family VC0395_A0674 PF06074 Protein of unknown function (DUF935) VC0395_A0682 PF10124 Mu-like prophage major head subunit gpT VC0395_A0684 PF07030 Protein of unknown function (DUF1320) VC0395_A0688 PF04984 Phage tail sheath protein subtilisin-like domain VC0395_A0688 PF17482 Phage tail sheath C-terminal domain VC0395_A0690 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 VC0395_A0694 PF06890 Bacteriophage Mu Gp45 protein VC0395_A0696 PF04865 Baseplate J-like protein VC0395_A0697 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) VC0395_A0700 PF00816 H-NS histone family VC0395_A0701 PF03553 Na+/H+ antiporter family VC0395_A0702 PF08029 HisG, C-terminal domain VC0395_A0702 PF01634 ATP phosphoribosyltransferase VC0395_A0703 PF00815 Histidinol dehydrogenase VC0395_A0704 PF00155 Aminotransferase class I and II VC0395_A0705 PF00475 Imidazoleglycerol-phosphate dehydratase VC0395_A0705 PF08645 Polynucleotide kinase 3 phosphatase VC0395_A0706 PF00117 Glutamine amidotransferase class-I VC0395_A0707 PF00977 Histidine biosynthesis protein VC0395_A0708 PF00977 Histidine biosynthesis protein VC0395_A0709 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VC0395_A0709 PF01502 Phosphoribosyl-AMP cyclohydrolase VC0395_A0710 PF00849 RNA pseudouridylate synthase VC0395_A0711 PF03971 Monomeric isocitrate dehydrogenase VC0395_A0712 PF00313 'Cold-shock' DNA-binding domain VC0395_A0713 PF02617 ATP-dependent Clp protease adaptor protein ClpS VC0395_A0714 PF10431 C-terminal, D2-small domain, of ClpB protein VC0395_A0714 PF00004 ATPase family associated with various cellular activities (AAA) VC0395_A0714 PF07724 AAA domain (Cdc48 subfamily) VC0395_A0714 PF02861 Clp amino terminal domain, pathogenicity island component VC0395_A0714 PF17871 AAA lid domain VC0395_A0715 PF06826 Predicted Permease Membrane Region VC0395_A0715 PF02080 TrkA-C domain VC0395_A0716 PF00462 Glutaredoxin VC0395_A0717 PF00465 Iron-containing alcohol dehydrogenase VC0395_A0717 PF00171 Aldehyde dehydrogenase family VC0395_A0718 PF01418 Helix-turn-helix domain, rpiR family VC0395_A0718 PF01380 SIS domain VC0395_A0719 PF00282 Pyridoxal-dependent decarboxylase conserved domain VC0395_A0721 PF03956 Lysine exporter LysO VC0395_A0723 PF04993 TfoX N-terminal domain VC0395_A0723 PF04994 TfoX C-terminal domain VC0395_A0726 PF00989 PAS fold VC0395_A0726 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0728 PF00266 Aminotransferase class-V VC0395_A0731 PF08443 RimK-like ATP-grasp domain VC0395_A0731 PF18030 RimK PreATP-grasp domain VC0395_A0732 PF08003 Protein of unknown function (DUF1698) VC0395_A0733 PF13649 Methyltransferase domain VC0395_A0734 PF01904 Protein of unknown function DUF72 VC0395_A0735 PF02938 GAD domain VC0395_A0735 PF00152 tRNA synthetases class II (D, K and N) VC0395_A0735 PF01336 OB-fold nucleic acid binding domain VC0395_A0736 PF00265 Thymidine kinase VC0395_A0737 PF00375 Sodium:dicarboxylate symporter family VC0395_A0740 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) VC0395_A0741 PF04865 Baseplate J-like protein VC0395_A0743 PF06890 Bacteriophage Mu Gp45 protein VC0395_A0747 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 VC0395_A0749 PF17482 Phage tail sheath C-terminal domain VC0395_A0749 PF04984 Phage tail sheath protein subtilisin-like domain VC0395_A0753 PF07030 Protein of unknown function (DUF1320) VC0395_A0755 PF10124 Mu-like prophage major head subunit gpT VC0395_A0763 PF06074 Protein of unknown function (DUF935) VC0395_A0764 PF03237 Terminase-like family VC0395_A0765 PF11985 Protein of unknown function (DUF3486) VC0395_A0766 PF08461 Ribonuclease R winged-helix domain VC0395_A0786 PF09077 Mu B transposition protein, C terminal VC0395_A0786 PF13401 AAA domain VC0395_A0787 PF02316 Mu DNA-binding domain VC0395_A0787 PF09039 Mu DNA binding, I gamma subdomain VC0395_A0787 PF02914 Bacteriophage Mu transposase VC0395_A0787 PF09299 Mu transposase, C-terminal VC0395_A0788 PF13693 Winged helix-turn-helix DNA-binding VC0395_A0790 PF00375 Sodium:dicarboxylate symporter family VC0395_A0791 PF00290 Tryptophan synthase alpha chain VC0395_A0792 PF00291 Pyridoxal-phosphate dependent enzyme VC0395_A0793 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VC0395_A0793 PF00218 Indole-3-glycerol phosphate synthase VC0395_A0794 PF00591 Glycosyl transferase family, a/b domain VC0395_A0794 PF02885 Glycosyl transferase family, helical bundle domain VC0395_A0795 PF00117 Glutamine amidotransferase class-I VC0395_A0796 PF00425 chorismate binding enzyme VC0395_A0796 PF04715 Anthranilate synthase component I, N terminal region VC0395_A0797 PF08056 Tryptophan operon leader peptide VC0395_A0798 PF02811 PHP domain VC0395_A0799 PF01300 Telomere recombination VC0395_A0800 PF01479 S4 domain VC0395_A0800 PF00849 RNA pseudouridylate synthase VC0395_A0801 PF00005 ABC transporter VC0395_A0801 PF00664 ABC transporter transmembrane region VC0395_A0802 PF00005 ABC transporter VC0395_A0802 PF00664 ABC transporter transmembrane region VC0395_A0803 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A0805 PF00266 Aminotransferase class-V VC0395_A0806 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0806 PF08448 PAS fold VC0395_A0807 PF02698 DUF218 domain VC0395_A0809 PF03949 Malic enzyme, NAD binding domain VC0395_A0809 PF00390 Malic enzyme, N-terminal domain VC0395_A0811 PF01259 SAICAR synthetase VC0395_A0815 PF13488 Glycine zipper VC0395_A0815 PF00691 OmpA family VC0395_A0818 PF01565 FAD binding domain VC0395_A0818 PF02913 FAD linked oxidases, C-terminal domain VC0395_A0818 PF13183 4Fe-4S dicluster domain VC0395_A0819 PF04191 Phospholipid methyltransferase VC0395_A0820 PF00089 Trypsin VC0395_A0822 PF00221 Aromatic amino acid lyase VC0395_A0823 PF17391 Urocanase N-terminal domain VC0395_A0823 PF17392 Urocanase C-terminal domain VC0395_A0823 PF01175 Urocanase Rossmann-like domain VC0395_A0824 PF00491 Arginase family VC0395_A0825 PF01979 Amidohydrolase family VC0395_A0826 PF00392 Bacterial regulatory proteins, gntR family VC0395_A0826 PF07702 UTRA domain VC0395_A0828 PF04269 Protein of unknown function, DUF440 VC0395_A0829 PF01132 Elongation factor P (EF-P) OB domain VC0395_A0829 PF08207 Elongation factor P (EF-P) KOW-like domain VC0395_A0829 PF09285 Elongation factor P, C-terminal VC0395_A0831 PF00136 DNA polymerase family B VC0395_A0831 PF03104 DNA polymerase family B, exonuclease domain VC0395_A0832 PF00563 EAL domain VC0395_A0832 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0832 PF13426 PAS domain VC0395_A0833 PF00196 Bacterial regulatory proteins, luxR family VC0395_A0833 PF00072 Response regulator receiver domain VC0395_A0834 PF08459 UvrC Helix-hairpin-helix N-terminal VC0395_A0834 PF02151 UvrB/uvrC motif VC0395_A0834 PF01541 GIY-YIG catalytic domain VC0395_A0835 PF01066 CDP-alcohol phosphatidyltransferase VC0395_A0841 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0841 PF00072 Response regulator receiver domain VC0395_A0843 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VC0395_A0843 PF01409 tRNA synthetases class II core domain (F) VC0395_A0844 PF03483 B3/4 domain VC0395_A0844 PF01588 Putative tRNA binding domain VC0395_A0844 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VC0395_A0844 PF03484 tRNA synthetase B5 domain VC0395_A0844 PF03147 Ferredoxin-fold anticodon binding domain VC0395_A0846 PF00216 Bacterial DNA-binding protein VC0395_A0849 PF05724 Thiopurine S-methyltransferase (TPMT) VC0395_A0850 PF02222 ATP-grasp domain VC0395_A0852 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VC0395_A0852 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VC0395_A0853 PF04172 LrgB-like family VC0395_A0854 PF03788 LrgA family VC0395_A0855 PF00929 Exonuclease VC0395_A0855 PF08411 Exonuclease C-terminal VC0395_A0857 PF01641 SelR domain VC0395_A0859 PF02277 Phosphoribosyltransferase VC0395_A0860 PF02654 Cobalamin-5-phosphate synthase VC0395_A0861 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VC0395_A0863 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VC0395_A0864 PF01032 FecCD transport family VC0395_A0865 PF00005 ABC transporter VC0395_A0868 PF17200 Single Cache domain 2 VC0395_A0868 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A0868 PF00672 HAMP domain VC0395_A0871 PF00994 Probable molybdopterin binding domain VC0395_A0873 PF00970 Oxidoreductase FAD-binding domain VC0395_A0873 PF00111 2Fe-2S iron-sulfur cluster binding domain VC0395_A0873 PF00175 Oxidoreductase NAD-binding domain VC0395_A0874 PF00268 Ribonucleotide reductase, small chain VC0395_A0875 PF02867 Ribonucleotide reductase, barrel domain VC0395_A0875 PF00317 Ribonucleotide reductase, all-alpha domain VC0395_A0875 PF03477 ATP cone domain VC0395_A0877 PF03989 DNA gyrase C-terminal domain, beta-propeller VC0395_A0877 PF00521 DNA gyrase/topoisomerase IV, subunit A VC0395_A0880 PF07690 Major Facilitator Superfamily VC0395_A0882 PF00925 GTP cyclohydrolase II VC0395_A0888 PF05951 Bacterial protein of unknown function (DUF882) VC0395_A0890 PF00753 Metallo-beta-lactamase superfamily VC0395_A0892 PF03480 Bacterial extracellular solute-binding protein, family 7 VC0395_A0894 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VC0395_A0895 PF17200 Single Cache domain 2 VC0395_A0895 PF07730 Histidine kinase VC0395_A0896 PF00196 Bacterial regulatory proteins, luxR family VC0395_A0896 PF00072 Response regulator receiver domain VC0395_A0897 PF01047 MarR family VC0395_A0898 PF02028 BCCT, betaine/carnitine/choline family transporter VC0395_A0899 PF01522 Polysaccharide deacetylase VC0395_A0900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC0395_A0901 PF02378 Phosphotransferase system, EIIC VC0395_A0902 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VC0395_A0903 PF11975 Family 4 glycosyl hydrolase C-terminal domain VC0395_A0903 PF02056 Family 4 glycosyl hydrolase VC0395_A0904 PF04794 YdjC-like protein VC0395_A0905 PF00356 Bacterial regulatory proteins, lacI family VC0395_A0906 PF13506 Glycosyl transferase family 21 VC0395_A0907 PF04349 Periplasmic glucan biosynthesis protein, MdoG VC0395_A0908 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A0908 PF17200 Single Cache domain 2 VC0395_A0908 PF00672 HAMP domain VC0395_A0911 PF00155 Aminotransferase class I and II VC0395_A0913 PF01966 HD domain VC0395_A0913 PF00672 HAMP domain VC0395_A0914 PF08543 Phosphomethylpyrimidine kinase VC0395_A0914 PF02581 Thiamine monophosphate synthase VC0395_A0915 PF01336 OB-fold nucleic acid binding domain VC0395_A0915 PF00152 tRNA synthetases class II (D, K and N) VC0395_A0916 PF00672 HAMP domain VC0395_A0916 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A0917 PF01242 6-pyruvoyl tetrahydropterin synthase VC0395_A0918 PF03315 Serine dehydratase beta chain VC0395_A0918 PF03313 Serine dehydratase alpha chain VC0395_A0919 PF03222 Tryptophan/tyrosine permease family VC0395_A0920 PF00293 NUDIX domain VC0395_A0921 PF00425 chorismate binding enzyme VC0395_A0921 PF04715 Anthranilate synthase component I, N terminal region VC0395_A0924 PF04317 YcjX-like family, DUF463 VC0395_A0925 PF05128 Domain of unknown function (DUF697) VC0395_A0926 PF18024 Helix-turn-helix domain VC0395_A0926 PF00158 Sigma-54 interaction domain VC0395_A0927 PF13302 Acetyltransferase (GNAT) domain VC0395_A0929 PF00892 EamA-like transporter family VC0395_A0930 PF01168 Alanine racemase, N-terminal domain VC0395_A0930 PF00842 Alanine racemase, C-terminal domain VC0395_A0931 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A0931 PF00672 HAMP domain VC0395_A0932 PF00939 Sodium:sulfate symporter transmembrane region VC0395_A0933 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0933 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0933 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_A0934 PF02954 Bacterial regulatory protein, Fis family VC0395_A0934 PF00072 Response regulator receiver domain VC0395_A0934 PF00158 Sigma-54 interaction domain VC0395_A0935 PF04393 Protein of unknown function (DUF535) VC0395_A0936 PF06629 MltA-interacting protein MipA VC0395_A0937 PF00672 HAMP domain VC0395_A0937 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0937 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0938 PF00486 Transcriptional regulatory protein, C terminal VC0395_A0938 PF00072 Response regulator receiver domain VC0395_A0942 PF13407 Periplasmic binding protein domain VC0395_A0944 PF00005 ABC transporter VC0395_A0945 PF02653 Branched-chain amino acid transport system / permease component VC0395_A0948 PF01970 Tripartite tricarboxylate transporter TctA family VC0395_A0951 PF00392 Bacterial regulatory proteins, gntR family VC0395_A0951 PF07729 FCD domain VC0395_A0953 PF00285 Citrate synthase, C-terminal domain VC0395_A0954 PF00694 Aconitase C-terminal domain VC0395_A0954 PF00330 Aconitase family (aconitate hydratase) VC0395_A0955 PF04303 PrpF protein VC0395_A0956 PF00501 AMP-binding enzyme VC0395_A0956 PF13193 AMP-binding enzyme C-terminal domain VC0395_A0956 PF16177 Acetyl-coenzyme A synthetase N-terminus VC0395_A0959 PF01546 Peptidase family M20/M25/M40 VC0395_A0959 PF07687 Peptidase dimerisation domain VC0395_A0960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC0395_A0961 PF04209 homogentisate 1,2-dioxygenase VC0395_A0963 PF00072 Response regulator receiver domain VC0395_A0964 PF02798 Glutathione S-transferase, N-terminal domain VC0395_A0964 PF14497 Glutathione S-transferase, C-terminal domain VC0395_A0965 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A0965 PF01627 Hpt domain VC0395_A0965 PF00072 Response regulator receiver domain VC0395_A0965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VC0395_A0965 PF00672 HAMP domain VC0395_A0965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A0966 PF00462 Glutaredoxin VC0395_A0966 PF08534 Redoxin VC0395_A0967 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0968 PF10672 S-adenosylmethionine-dependent methyltransferase VC0395_A0968 PF17785 PUA-like domain VC0395_A0969 PF00708 Acylphosphatase VC0395_A0970 PF04358 DsrC like protein VC0395_A0971 PF01027 Inhibitor of apoptosis-promoting Bax1 VC0395_A0972 PF00005 ABC transporter VC0395_A0973 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0974 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A0975 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_A0976 PF10414 Sirohaem synthase dimerisation region VC0395_A0976 PF14824 Sirohaem biosynthesis protein central VC0395_A0976 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VC0395_A0978 PF04055 Radical SAM superfamily VC0395_A0980 PF06508 Queuosine biosynthesis protein QueC VC0395_A0983 PF00563 EAL domain VC0395_A0983 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0983 PF03707 Bacterial signalling protein N terminal repeat VC0395_A0985 PF17158 Membrane-associated sensor, integral membrane domain VC0395_A0985 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0986 PF00012 Hsp70 protein VC0395_A0987 PF00012 Hsp70 protein VC0395_A0991 PF00563 EAL domain VC0395_A0991 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A0991 PF03707 Bacterial signalling protein N terminal repeat VC0395_A0997 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VC0395_A0997 PF00270 DEAD/DEAH box helicase VC0395_A0997 PF11898 Domain of unknown function (DUF3418) VC0395_A0997 PF04408 Helicase associated domain (HA2) VC0395_A0997 PF00271 Helicase conserved C-terminal domain VC0395_A0999 PF00012 Hsp70 protein VC0395_A1000 PF10437 Bacterial lipoate protein ligase C-terminus VC0395_A1000 PF03099 Biotin/lipoate A/B protein ligase family VC0395_A1001 PF03466 LysR substrate binding domain VC0395_A1001 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1003 PF07690 Major Facilitator Superfamily VC0395_A1004 PF03441 FAD binding domain of DNA photolyase VC0395_A1004 PF00875 DNA photolyase VC0395_A1005 PF00893 Small Multidrug Resistance protein VC0395_A1006 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1006 PF00672 HAMP domain VC0395_A1009 PF01584 CheW-like domain VC0395_A1009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1009 PF02895 Signal transducing histidine kinase, homodimeric domain VC0395_A1009 PF07194 P2 response regulator binding domain VC0395_A1009 PF01627 Hpt domain VC0395_A1010 PF01584 CheW-like domain VC0395_A1010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1010 PF01627 Hpt domain VC0395_A1010 PF00072 Response regulator receiver domain VC0395_A1011 PF01739 CheR methyltransferase, SAM binding domain VC0395_A1011 PF03705 CheR methyltransferase, all-alpha domain VC0395_A1013 PF00072 Response regulator receiver domain VC0395_A1013 PF01339 CheB methylesterase VC0395_A1014 PF01584 CheW-like domain VC0395_A1015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1015 PF17202 Single cache domain 3 VC0395_A1015 PF00672 HAMP domain VC0395_A1016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1016 PF12729 Four helix bundle sensory module for signal transduction VC0395_A1016 PF00672 HAMP domain VC0395_A1017 PF13426 PAS domain VC0395_A1017 PF08447 PAS fold VC0395_A1017 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1018 PF00271 Helicase conserved C-terminal domain VC0395_A1018 PF00270 DEAD/DEAH box helicase VC0395_A1020 PF02321 Outer membrane efflux protein VC0395_A1021 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VC0395_A1021 PF00529 HlyD membrane-fusion protein of T1SS VC0395_A1022 PF07690 Major Facilitator Superfamily VC0395_A1023 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1023 PF00672 HAMP domain VC0395_A1023 PF02743 Cache domain VC0395_A1024 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VC0395_A1025 PF05638 Type VI secretion system effector, Hcp VC0395_A1026 PF16671 Actin cross-linking domain VC0395_A1026 PF04717 Type VI secretion system, phage-baseplate injector VC0395_A1031 PF01810 LysE type translocator VC0395_A1032 PF01235 Sodium:alanine symporter family VC0395_A1035 PF13416 Bacterial extracellular solute-binding protein VC0395_A1036 PF13416 Bacterial extracellular solute-binding protein VC0395_A1037 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1038 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1039 PF08402 TOBE domain VC0395_A1039 PF00005 ABC transporter VC0395_A1043 PF01171 PP-loop family VC0395_A1044 PF00582 Universal stress protein family VC0395_A1045 PF13545 Crp-like helix-turn-helix domain VC0395_A1045 PF00027 Cyclic nucleotide-binding domain VC0395_A1048 PF00403 Heavy-metal-associated domain VC0395_A1050 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VC0395_A1050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VC0395_A1053 PF00115 Cytochrome C and Quinol oxidase polypeptide I VC0395_A1055 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A1055 PF00072 Response regulator receiver domain VC0395_A1055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1055 PF09308 LuxQ, periplasmic VC0395_A1056 PF00664 ABC transporter transmembrane region VC0395_A1056 PF00005 ABC transporter VC0395_A1056 PF03412 Peptidase C39 family VC0395_A1058 PF00005 ABC transporter VC0395_A1058 PF03412 Peptidase C39 family VC0395_A1058 PF00664 ABC transporter transmembrane region VC0395_A1059 PF12146 Serine aminopeptidase, S33 VC0395_A1059 PF16671 Actin cross-linking domain VC0395_A1059 PF11647 Membrane Localization Domain VC0395_A1059 PF07634 RtxA repeat VC0395_A1059 PF11713 Peptidase C80 family VC0395_A1060 PF01375 Heat-labile enterotoxin alpha chain VC0395_A1061 PF05707 Zonular occludens toxin (Zot) VC0395_A1062 PF10734 Protein of unknown function (DUF2523) VC0395_A1063 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII VC0395_A1067 PF01381 Helix-turn-helix VC0395_A1070 PF01381 Helix-turn-helix VC0395_A1089 PF17414 MatP C-terminal ribbon-helix-helix domain VC0395_A1089 PF06303 MatP N-terminal domain VC0395_A1090 PF05362 Lon protease (S16) C-terminal proteolytic domain VC0395_A1090 PF13654 AAA domain VC0395_A1091 PF07977 FabA-like domain VC0395_A1095 PF01170 Putative RNA methylase family UPF0020 VC0395_A1095 PF10672 S-adenosylmethionine-dependent methyltransferase VC0395_A1095 PF02926 THUMP domain VC0395_A1097 PF07126 Cell-division protein ZapC VC0395_A1098 PF01180 Dihydroorotate dehydrogenase VC0395_A1099 PF05088 Bacterial NAD-glutamate dehydrogenase VC0395_A1100 PF05088 Bacterial NAD-glutamate dehydrogenase VC0395_A1102 PF11940 Domain of unknown function (DUF3458) Ig-like fold VC0395_A1102 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VC0395_A1102 PF01433 Peptidase family M1 domain VC0395_A1104 PF00595 PDZ domain VC0395_A1104 PF11818 C-terminal domain of tail specific protease (DUF3340) VC0395_A1104 PF03572 Peptidase family S41 VC0395_A1104 PF17804 Tail specific protease N-terminal domain VC0395_A1105 PF04352 ProQ/FINO family VC0395_A1105 PF17516 ProQ C-terminal domain VC0395_A1106 PF13185 GAF domain VC0395_A1107 PF00664 ABC transporter transmembrane region VC0395_A1107 PF00005 ABC transporter VC0395_A1108 PF04403 Paraquat-inducible protein A VC0395_A1109 PF02470 MlaD protein VC0395_A1110 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VC0395_A1110 PF01189 16S rRNA methyltransferase RsmB/F VC0395_A1110 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VC0395_A1111 PF17783 CvfB-like winged helix domain VC0395_A1111 PF13509 S1 domain VC0395_A1114 PF00793 DAHP synthetase I family VC0395_A1115 PF04461 Protein of unknown function (DUF520) VC0395_A1116 PF02146 Sir2 family VC0395_A1119 PF13247 4Fe-4S dicluster domain VC0395_A1120 PF00384 Molybdopterin oxidoreductase VC0395_A1120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VC0395_A1120 PF01568 Molydopterin dinucleotide binding domain VC0395_A1122 PF02613 Nitrate reductase delta subunit VC0395_A1126 PF02634 FdhD/NarQ family VC0395_A1127 PF00005 ABC transporter VC0395_A1127 PF12848 ABC transporter VC0395_A1128 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A1128 PF00989 PAS fold VC0395_A1128 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1129 PF02954 Bacterial regulatory protein, Fis family VC0395_A1129 PF00158 Sigma-54 interaction domain VC0395_A1129 PF00072 Response regulator receiver domain VC0395_A1130 PF12849 PBP superfamily domain VC0395_A1131 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1132 PF00005 ABC transporter VC0395_A1132 PF08402 TOBE domain VC0395_A1133 PF12804 MobA-like NTP transferase domain VC0395_A1134 PF00994 Probable molybdopterin binding domain VC0395_A1134 PF03453 MoeA N-terminal region (domain I and II) VC0395_A1134 PF03454 MoeA C-terminal region (domain IV) VC0395_A1138 PF00480 ROK family VC0395_A1141 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1141 PF00672 HAMP domain VC0395_A1141 PF02743 Cache domain VC0395_A1142 PF00877 NlpC/P60 family VC0395_A1146 PF01554 MatE VC0395_A1148 PF01068 ATP dependent DNA ligase domain VC0395_A1148 PF14743 DNA ligase OB-like domain VC0395_A1150 PF03544 Gram-negative bacterial TonB protein C-terminal VC0395_A1151 PF02472 Biopolymer transport protein ExbD/TolR VC0395_A1152 PF01618 MotA/TolQ/ExbB proton channel family VC0395_A1153 PF01618 MotA/TolQ/ExbB proton channel family VC0395_A1155 PF13416 Bacterial extracellular solute-binding protein VC0395_A1156 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1157 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1158 PF00005 ABC transporter VC0395_A1158 PF17912 MalK OB fold domain VC0395_A1159 PF00455 DeoR C terminal sensor domain VC0395_A1159 PF08220 DeoR-like helix-turn-helix domain VC0395_A1160 PF03009 Glycerophosphoryl diester phosphodiesterase family VC0395_A1161 PF04074 YhcH/YjgK/YiaL VC0395_A1162 PF01042 Endoribonuclease L-PSP VC0395_A1164 PF00356 Bacterial regulatory proteins, lacI family VC0395_A1165 PF00232 Glycosyl hydrolase family 1 VC0395_A1166 PF00141 Peroxidase VC0395_A1167 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1167 PF03466 LysR substrate binding domain VC0395_A1169 PF00529 HlyD membrane-fusion protein of T1SS VC0395_A1171 PF00005 ABC transporter VC0395_A1171 PF02687 FtsX-like permease family VC0395_A1171 PF12704 MacB-like periplasmic core domain VC0395_A1172 PF12704 MacB-like periplasmic core domain VC0395_A1172 PF00005 ABC transporter VC0395_A1172 PF02687 FtsX-like permease family VC0395_A1173 PF00005 ABC transporter VC0395_A1173 PF12704 MacB-like periplasmic core domain VC0395_A1173 PF02687 FtsX-like permease family VC0395_A1174 PF02322 Cytochrome bd terminal oxidase subunit II VC0395_A1175 PF01654 Cytochrome bd terminal oxidase subunit I VC0395_A1177 PF10415 Fumarase C C-terminus VC0395_A1177 PF00206 Lyase VC0395_A1182 PF13193 AMP-binding enzyme C-terminal domain VC0395_A1182 PF00501 AMP-binding enzyme VC0395_A1183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1183 PF03466 LysR substrate binding domain VC0395_A1184 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VC0395_A1184 PF00361 Proton-conducting membrane transporter VC0395_A1185 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) VC0395_A1186 PF00080 Copper/zinc superoxide dismutase (SODC) VC0395_A1188 PF00199 Catalase VC0395_A1188 PF06628 Catalase-related immune-responsive VC0395_A1190 PF03466 LysR substrate binding domain VC0395_A1190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1191 PF03306 Alpha-acetolactate decarboxylase VC0395_A1192 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC0395_A1192 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VC0395_A1192 PF00205 Thiamine pyrophosphate enzyme, central domain VC0395_A1194 PF17154 Gammaproteobacterial periplasmic sensor domain VC0395_A1194 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1194 PF00672 HAMP domain VC0395_A1194 PF00563 EAL domain VC0395_A1195 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1196 PF01263 Aldose 1-epimerase VC0395_A1197 PF10509 Galactokinase galactose-binding signature VC0395_A1197 PF00288 GHMP kinases N terminal domain VC0395_A1197 PF08544 GHMP kinases C terminal VC0395_A1198 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VC0395_A1198 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VC0395_A1199 PF07690 Major Facilitator Superfamily VC0395_A1204 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1204 PF00072 Response regulator receiver domain VC0395_A1207 PF00072 Response regulator receiver domain VC0395_A1207 PF01584 CheW-like domain VC0395_A1209 PF00072 Response regulator receiver domain VC0395_A1209 PF12431 Transcriptional regulator VC0395_A1210 PF00989 PAS fold VC0395_A1210 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VC0395_A1210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1210 PF17203 Single cache domain 3 VC0395_A1212 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VC0395_A1216 PF04204 Homoserine O-succinyltransferase VC0395_A1219 PF05971 RNA methyltransferase VC0395_A1220 PF01797 Transposase IS200 like VC0395_A1221 PF05971 RNA methyltransferase VC0395_A1222 PF01863 Protein of unknown function DUF45 VC0395_A1224 PF03466 LysR substrate binding domain VC0395_A1224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1228 PF02321 Outer membrane efflux protein VC0395_A1229 PF00691 OmpA family VC0395_A1229 PF05736 OprF membrane domain VC0395_A1231 PF16653 Saccharopine dehydrogenase C-terminal domain VC0395_A1231 PF03435 Saccharopine dehydrogenase NADP binding domain VC0395_A1232 PF00202 Aminotransferase class-III VC0395_A1233 PF06965 Na+/H+ antiporter 1 VC0395_A1236 PF00005 ABC transporter VC0395_A1237 PF01554 MatE VC0395_A1238 PF11066 Protein of unknown function (DUF2867) VC0395_A1238 PF13460 NAD(P)H-binding VC0395_A1240 PF07690 Major Facilitator Superfamily VC0395_A1241 PF01479 S4 domain VC0395_A1241 PF00849 RNA pseudouridylate synthase VC0395_A1242 PF00271 Helicase conserved C-terminal domain VC0395_A1242 PF04851 Type III restriction enzyme, res subunit VC0395_A1244 PF00072 Response regulator receiver domain VC0395_A1244 PF00486 Transcriptional regulatory protein, C terminal VC0395_A1246 PF01386 Ribosomal L25p family VC0395_A1247 PF00563 EAL domain VC0395_A1247 PF01590 GAF domain VC0395_A1247 PF00360 Phytochrome region VC0395_A1247 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1249 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1249 PF00672 HAMP domain VC0395_A1249 PF12729 Four helix bundle sensory module for signal transduction VC0395_A1253 PF12793 Sugar transport-related sRNA regulator N-term VC0395_A1253 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC0395_A1255 PF04151 Bacterial pre-peptidase C-terminal domain VC0395_A1255 PF01752 Collagenase VC0395_A1255 PF08453 Peptidase family M9 N-terminal VC0395_A1256 PF04151 Bacterial pre-peptidase C-terminal domain VC0395_A1256 PF01752 Collagenase VC0395_A1256 PF08453 Peptidase family M9 N-terminal VC0395_A1258 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1258 PF00563 EAL domain VC0395_A1258 PF03707 Bacterial signalling protein N terminal repeat VC0395_A1259 PF00072 Response regulator receiver domain VC0395_A1259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1259 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A1259 PF09308 LuxQ, periplasmic VC0395_A1260 PF01769 Divalent cation transporter VC0395_A1260 PF03448 MgtE intracellular N domain VC0395_A1260 PF00571 CBS domain VC0395_A1262 PF03222 Tryptophan/tyrosine permease family VC0395_A1263 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VC0395_A1264 PF00005 ABC transporter VC0395_A1267 PF06945 Protein of unknown function (DUF1289) VC0395_A1269 PF13416 Bacterial extracellular solute-binding protein VC0395_A1270 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1271 PF00005 ABC transporter VC0395_A1272 PF01066 CDP-alcohol phosphatidyltransferase VC0395_A1273 PF00849 RNA pseudouridylate synthase VC0395_A1274 PF00209 Sodium:neurotransmitter symporter family VC0395_A1275 PF13091 PLD-like domain VC0395_A1275 PF13396 Phospholipase_D-nuclease N-terminal VC0395_A1276 PF01053 Cys/Met metabolism PLP-dependent enzyme VC0395_A1277 PF03352 Methyladenine glycosylase VC0395_A1278 PF00873 AcrB/AcrD/AcrF family VC0395_A1279 PF13533 Biotin-lipoyl like VC0395_A1280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VC0395_A1280 PF00529 HlyD membrane-fusion protein of T1SS VC0395_A1283 PF04012 PspA/IM30 family VC0395_A1284 PF00158 Sigma-54 interaction domain VC0395_A1284 PF02954 Bacterial regulatory protein, Fis family VC0395_A1285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC0395_A1286 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1287 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1287 PF12911 N-terminal TM domain of oligopeptide transport permease C VC0395_A1288 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_A1288 PF00005 ABC transporter VC0395_A1289 PF00005 ABC transporter VC0395_A1292 PF01368 DHH family VC0395_A1292 PF02833 DHHA2 domain VC0395_A1296 PF00384 Molybdopterin oxidoreductase VC0395_A1296 PF18364 Molybdopterin oxidoreductase N-terminal domain VC0395_A1296 PF01568 Molydopterin dinucleotide binding domain VC0395_A1297 PF03264 NapC/NirT cytochrome c family, N-terminal region VC0395_A1298 PF06796 Periplasmic nitrate reductase protein NapE VC0395_A1299 PF01226 Formate/nitrite transporter VC0395_A1301 PF01370 NAD dependent epimerase/dehydratase family VC0395_A1302 PF02698 DUF218 domain VC0395_A1304 PF04279 Intracellular septation protein A VC0395_A1305 PF03061 Thioesterase superfamily VC0395_A1306 PF03795 YCII-related domain VC0395_A1308 PF01717 Cobalamin-independent synthase, Catalytic domain VC0395_A1308 PF08267 Cobalamin-independent synthase, N-terminal domain VC0395_A1309 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1309 PF03466 LysR substrate binding domain VC0395_A1312 PF05193 Peptidase M16 inactive domain VC0395_A1312 PF00675 Insulinase (Peptidase family M16) VC0395_A1313 PF00563 EAL domain VC0395_A1313 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1313 PF08448 PAS fold VC0395_A1313 PF08447 PAS fold VC0395_A1314 PF11842 Domain of unknown function (DUF3362) VC0395_A1314 PF04055 Radical SAM superfamily VC0395_A1314 PF08497 Radical SAM N-terminal VC0395_A1315 PF01810 LysE type translocator VC0395_A1317 PF16330 MukB hinge domain VC0395_A1317 PF04310 MukB N-terminal VC0395_A1318 PF04288 MukE-like family VC0395_A1319 PF17192 MukF middle domain VC0395_A1319 PF17193 MukF C-terminal domain VC0395_A1319 PF03882 MukF winged-helix domain VC0395_A1321 PF02698 DUF218 domain VC0395_A1322 PF00486 Transcriptional regulatory protein, C terminal VC0395_A1322 PF00072 Response regulator receiver domain VC0395_A1323 PF02613 Nitrate reductase delta subunit VC0395_A1324 PF00356 Bacterial regulatory proteins, lacI family VC0395_A1325 PF04993 TfoX N-terminal domain VC0395_A1325 PF04994 TfoX C-terminal domain VC0395_A1329 PF00534 Glycosyl transferases group 1 VC0395_A1329 PF08323 Starch synthase catalytic domain VC0395_A1330 PF00483 Nucleotidyl transferase VC0395_A1332 PF08272 Topoisomerase I zinc-ribbon-like VC0395_A1332 PF01131 DNA topoisomerase VC0395_A1332 PF01751 Toprim domain VC0395_A1332 PF01396 Topoisomerase DNA binding C4 zinc finger VC0395_A1333 PF10692 Protein of unknown function (DUF2498) VC0395_A1334 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VC0395_A1336 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VC0395_A1337 PF04376 Arginine-tRNA-protein transferase, N terminus VC0395_A1337 PF04377 Arginine-tRNA-protein transferase, C terminus VC0395_A1338 PF01176 Translation initiation factor 1A / IF-1 VC0395_A1339 PF12241 Trans-2-enoyl-CoA reductase catalytic region VC0395_A1339 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VC0395_A1339 PF07055 Enoyl reductase FAD binding domain VC0395_A1340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VC0395_A1340 PF02770 Acyl-CoA dehydrogenase, middle domain VC0395_A1340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VC0395_A1340 PF09317 Domain of unknown function (DUF1974) VC0395_A1341 PF00440 Bacterial regulatory proteins, tetR family VC0395_A1341 PF16295 Tetracyclin repressor-like, C-terminal domain VC0395_A1344 PF00171 Aldehyde dehydrogenase family VC0395_A1345 PF07383 Protein of unknown function (DUF1496) VC0395_A1346 PF08362 YcdC-like protein, C-terminal region VC0395_A1346 PF00440 Bacterial regulatory proteins, tetR family VC0395_A1350 PF05552 Conserved TM helix VC0395_A1350 PF00924 Mechanosensitive ion channel VC0395_A1351 PF04403 Paraquat-inducible protein A VC0395_A1352 PF02470 MlaD protein VC0395_A1354 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VC0395_A1355 PF00873 AcrB/AcrD/AcrF family VC0395_A1357 PF00589 Phage integrase family VC0395_A1357 PF13356 Arm DNA-binding domain VC0395_A1358 PF00589 Phage integrase family VC0395_A1358 PF13356 Arm DNA-binding domain VC0395_A1359 PF00271 Helicase conserved C-terminal domain VC0395_A1359 PF00176 SNF2 family N-terminal domain VC0395_A1359 PF12419 SNF2 Helicase protein VC0395_A1363 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VC0395_A1363 PF18766 SWI2/SNF2 ATPase VC0395_A1363 PF11867 Domain of unknown function (DUF3387) VC0395_A1367 PF02384 N-6 DNA Methylase VC0395_A1371 PF07646 Kelch motif VC0395_A1372 PF01344 Kelch motif VC0395_A1373 PF01380 SIS domain VC0395_A1373 PF01418 Helix-turn-helix domain, rpiR family VC0395_A1374 PF00701 Dihydrodipicolinate synthetase family VC0395_A1375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VC0395_A1376 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VC0395_A1377 PF03480 Bacterial extracellular solute-binding protein, family 7 VC0395_A1378 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VC0395_A1379 PF00480 ROK family VC0395_A1380 PF01979 Amidohydrolase family VC0395_A1381 PF09264 Vibrio cholerae sialidase, lectin insertion VC0395_A1381 PF13088 BNR repeat-like domain VC0395_A1383 PF04002 RadC-like JAB domain VC0395_A1386 PF00665 Integrase core domain VC0395_A1387 PF01527 Transposase VC0395_A1395 PF00005 ABC transporter VC0395_A1410 PF00875 DNA photolyase VC0395_A1410 PF03441 FAD binding domain of DNA photolyase VC0395_A1412 PF09905 DNA-binding protein VF530 VC0395_A1413 PF02954 Bacterial regulatory protein, Fis family VC0395_A1413 PF01590 GAF domain VC0395_A1413 PF00158 Sigma-54 interaction domain VC0395_A1414 PF00171 Aldehyde dehydrogenase family VC0395_A1418 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC0395_A1419 PF12833 Helix-turn-helix domain VC0395_A1421 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC0395_A1421 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC0395_A1421 PF02378 Phosphotransferase system, EIIC VC0395_A1422 PF01238 Phosphomannose isomerase type I VC0395_A1423 PF06610 L-alanine exporter VC0395_A1424 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1424 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A1424 PF09308 LuxQ, periplasmic VC0395_A1424 PF00072 Response regulator receiver domain VC0395_A1426 PF02445 Quinolinate synthetase A protein VC0395_A1428 PF00691 OmpA family VC0395_A1429 PF07676 WD40-like Beta Propeller Repeat VC0395_A1429 PF04052 TolB amino-terminal domain VC0395_A1431 PF02472 Biopolymer transport protein ExbD/TolR VC0395_A1432 PF01618 MotA/TolQ/ExbB proton channel family VC0395_A1434 PF02322 Cytochrome bd terminal oxidase subunit II VC0395_A1435 PF01654 Cytochrome bd terminal oxidase subunit I VC0395_A1436 PF05496 Holliday junction DNA helicase RuvB P-loop domain VC0395_A1436 PF05491 RuvB C-terminal winged helix domain VC0395_A1436 PF17864 RuvB AAA lid domain VC0395_A1437 PF01330 RuvA N terminal domain VC0395_A1437 PF07499 RuvA, C-terminal domain VC0395_A1438 PF02075 Crossover junction endodeoxyribonuclease RuvC VC0395_A1439 PF01406 tRNA synthetases class I (C) catalytic domain VC0395_A1439 PF09190 DALR domain VC0395_A1440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VC0395_A1441 PF00149 Calcineurin-like phosphoesterase VC0395_A1442 PF00563 EAL domain VC0395_A1442 PF08668 HDOD domain VC0395_A1443 PF02810 SEC-C motif VC0395_A1444 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VC0395_A1445 PF13609 Gram-negative porin VC0395_A1446 PF13307 Helicase C-terminal domain VC0395_A1446 PF06733 DEAD_2 VC0395_A1447 PF01925 Sulfite exporter TauE/SafE VC0395_A1448 PF07445 Primosomal replication protein priC VC0395_A1449 PF10689 Protein of unknown function (DUF2496) VC0395_A1450 PF00672 HAMP domain VC0395_A1450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1451 PF03372 Endonuclease/Exonuclease/phosphatase family VC0395_A1452 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1453 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A1454 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_A1455 PF00005 ABC transporter VC0395_A1457 PF01228 Glycine radical VC0395_A1457 PF02901 Pyruvate formate lyase-like VC0395_A1459 PF00672 HAMP domain VC0395_A1459 PF12729 Four helix bundle sensory module for signal transduction VC0395_A1459 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1460 PF04055 Radical SAM superfamily VC0395_A1462 PF03887 YfbU domain VC0395_A1463 PF08298 PrkA AAA domain VC0395_A1463 PF06798 PrkA serine protein kinase C-terminal domain VC0395_A1464 PF04285 Protein of unknown function (DUF444) VC0395_A1465 PF04293 SpoVR like protein VC0395_A1466 PF02348 Cytidylyltransferase VC0395_A1467 PF03966 Trm112p-like protein VC0395_A1468 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VC0395_A1469 PF00664 ABC transporter transmembrane region VC0395_A1469 PF00005 ABC transporter VC0395_A1470 PF03772 Competence protein VC0395_A1470 PF00753 Metallo-beta-lactamase superfamily VC0395_A1470 PF13567 Domain of unknown function (DUF4131) VC0395_A1472 PF12704 MacB-like periplasmic core domain VC0395_A1472 PF02687 FtsX-like permease family VC0395_A1473 PF00005 ABC transporter VC0395_A1474 PF12704 MacB-like periplasmic core domain VC0395_A1474 PF02687 FtsX-like permease family VC0395_A1476 PF17757 UvrB interaction domain VC0395_A1476 PF02559 CarD-like/TRCF domain VC0395_A1476 PF00270 DEAD/DEAH box helicase VC0395_A1476 PF00271 Helicase conserved C-terminal domain VC0395_A1476 PF03461 TRCF domain VC0395_A1478 PF07968 Leukocidin/Hemolysin toxin family VC0395_A1478 PF16458 Beta-prism lectin VC0395_A1478 PF12563 Hemolytic toxin N terminal VC0395_A1480 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A1482 PF05728 Uncharacterised protein family (UPF0227) VC0395_A1484 PF13036 Peptidoglycan-synthase activator LpoB VC0395_A1484 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VC0395_A1487 PF01230 HIT domain VC0395_A1488 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1488 PF00672 HAMP domain VC0395_A1490 PF00392 Bacterial regulatory proteins, gntR family VC0395_A1490 PF07840 FadR C-terminal domain VC0395_A1491 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VC0395_A1492 PF02600 Disulfide bond formation protein DsbB VC0395_A1493 PF01580 FtsK/SpoIIIE family VC0395_A1493 PF09397 Ftsk gamma domain VC0395_A1493 PF17854 FtsK alpha domain VC0395_A1493 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VC0395_A1494 PF01037 Lrp/AsnC ligand binding domain VC0395_A1495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VC0395_A1495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VC0395_A1497 PF03466 LysR substrate binding domain VC0395_A1497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1500 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VC0395_A1501 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VC0395_A1502 PF18073 Rubredoxin metal binding domain VC0395_A1503 PF06305 Lipopolysaccharide assembly protein A domain VC0395_A1504 PF00216 Bacterial DNA-binding protein VC0395_A1505 PF00575 S1 RNA binding domain VC0395_A1506 PF02224 Cytidylate kinase VC0395_A1508 PF13145 PPIC-type PPIASE domain VC0395_A1509 PF00216 Bacterial DNA-binding protein VC0395_A1510 PF00004 ATPase family associated with various cellular activities (AAA) VC0395_A1510 PF05362 Lon protease (S16) C-terminal proteolytic domain VC0395_A1510 PF02190 ATP-dependent protease La (LON) substrate-binding domain VC0395_A1511 PF07724 AAA domain (Cdc48 subfamily) VC0395_A1511 PF06689 ClpX C4-type zinc finger VC0395_A1511 PF10431 C-terminal, D2-small domain, of ClpB protein VC0395_A1512 PF00574 Clp protease VC0395_A1513 PF05697 Bacterial trigger factor protein (TF) VC0395_A1513 PF05698 Bacterial trigger factor protein (TF) C-terminus VC0395_A1513 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC0395_A1515 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A1515 PF02743 Cache domain VC0395_A1515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1516 PF00072 Response regulator receiver domain VC0395_A1516 PF00158 Sigma-54 interaction domain VC0395_A1516 PF02954 Bacterial regulatory protein, Fis family VC0395_A1517 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VC0395_A1518 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VC0395_A1519 PF03480 Bacterial extracellular solute-binding protein, family 7 VC0395_A1520 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VC0395_A1523 PF13188 PAS domain VC0395_A1523 PF03707 Bacterial signalling protein N terminal repeat VC0395_A1523 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1523 PF00563 EAL domain VC0395_A1533 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VC0395_A1533 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VC0395_A1534 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VC0395_A1535 PF01494 FAD binding domain VC0395_A1536 PF03466 LysR substrate binding domain VC0395_A1536 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1538 PF00384 Molybdopterin oxidoreductase VC0395_A1538 PF18364 Molybdopterin oxidoreductase N-terminal domain VC0395_A1538 PF01568 Molydopterin dinucleotide binding domain VC0395_A1539 PF03264 NapC/NirT cytochrome c family, N-terminal region VC0395_A1540 PF00704 Glycosyl hydrolases family 18 VC0395_A1541 PF07670 Nucleoside recognition VC0395_A1541 PF07662 Na+ dependent nucleoside transporter C-terminus VC0395_A1541 PF01773 Na+ dependent nucleoside transporter N-terminus VC0395_A1542 PF03466 LysR substrate binding domain VC0395_A1542 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1543 PF13406 Transglycosylase SLT domain VC0395_A1544 PF05166 YcgL domain VC0395_A1545 PF05209 Septum formation inhibitor MinC, N-terminal domain VC0395_A1545 PF03775 Septum formation inhibitor MinC, C-terminal domain VC0395_A1546 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VC0395_A1547 PF03776 Septum formation topological specificity factor MinE VC0395_A1548 PF04170 NlpE N-terminal domain VC0395_A1552 PF07690 Major Facilitator Superfamily VC0395_A1554 PF12729 Four helix bundle sensory module for signal transduction VC0395_A1554 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1554 PF00672 HAMP domain VC0395_A1555 PF01381 Helix-turn-helix VC0395_A1555 PF07883 Cupin domain VC0395_A1556 PF03594 Benzoate membrane transport protein VC0395_A1557 PF00501 AMP-binding enzyme VC0395_A1557 PF13193 AMP-binding enzyme C-terminal domain VC0395_A1558 PF13378 Enolase C-terminal domain-like VC0395_A1559 PF00378 Enoyl-CoA hydratase/isomerase VC0395_A1560 PF12697 Alpha/beta hydrolase family VC0395_A1561 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VC0395_A1561 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC0395_A1561 PF16582 Middle domain of thiamine pyrophosphate VC0395_A1562 PF00425 chorismate binding enzyme VC0395_A1563 PF00155 Aminotransferase class I and II VC0395_A1566 PF13286 Phosphohydrolase-associated domain VC0395_A1566 PF01966 HD domain VC0395_A1569 PF00570 HRDC domain VC0395_A1569 PF01612 3'-5' exonuclease VC0395_A1570 PF00501 AMP-binding enzyme VC0395_A1570 PF13193 AMP-binding enzyme C-terminal domain VC0395_A1571 PF00561 alpha/beta hydrolase fold VC0395_A1574 PF00814 Glycoprotease family VC0395_A1575 PF13307 Helicase C-terminal domain VC0395_A1575 PF04851 Type III restriction enzyme, res subunit VC0395_A1577 PF00551 Formyl transferase VC0395_A1577 PF01842 ACT domain VC0395_A1578 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A1578 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VC0395_A1579 PF01343 Peptidase family S49 VC0395_A1580 PF17763 Glutaminase/Asparaginase C-terminal domain VC0395_A1580 PF00710 Asparaginase, N-terminal VC0395_A1581 PF07023 Protein of unknown function (DUF1315) VC0395_A1584 PF01641 SelR domain VC0395_A1586 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC0395_A1586 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VC0395_A1587 PF01263 Aldose 1-epimerase VC0395_A1589 PF13847 Methyltransferase domain VC0395_A1592 PF00072 Response regulator receiver domain VC0395_A1592 PF01584 CheW-like domain VC0395_A1593 PF00480 ROK family VC0395_A1594 PF00224 Pyruvate kinase, barrel domain VC0395_A1594 PF02887 Pyruvate kinase, alpha/beta domain VC0395_A1595 PF01734 Patatin-like phospholipase VC0395_A1598 PF00209 Sodium:neurotransmitter symporter family VC0395_A1599 PF00367 phosphotransferase system, EIIB VC0395_A1599 PF02378 Phosphotransferase system, EIIC VC0395_A1600 PF01026 TatD related DNase VC0395_A1601 PF09115 DNA polymerase III, delta subunit, C terminal VC0395_A1602 PF02223 Thymidylate kinase VC0395_A1603 PF02618 YceG-like family VC0395_A1604 PF01063 Amino-transferase class IV VC0395_A1605 PF00109 Beta-ketoacyl synthase, N-terminal domain VC0395_A1605 PF02801 Beta-ketoacyl synthase, C-terminal domain VC0395_A1606 PF00550 Phosphopantetheine attachment site VC0395_A1608 PF00698 Acyl transferase domain VC0395_A1609 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VC0395_A1609 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VC0395_A1610 PF02504 Fatty acid synthesis protein VC0395_A1611 PF01783 Ribosomal L32p protein family VC0395_A1612 PF02620 Large ribosomal RNA subunit accumulation protein YceD VC0395_A1613 PF02545 Maf-like protein VC0395_A1614 PF01479 S4 domain VC0395_A1614 PF00849 RNA pseudouridylate synthase VC0395_A1615 PF12111 Polyribonucleotide phosphorylase C terminal VC0395_A1615 PF10150 Ribonuclease E/G family VC0395_A1615 PF00575 S1 RNA binding domain VC0395_A1617 PF01740 STAS domain VC0395_A1617 PF00916 Sulfate permease family VC0395_A1619 PF00171 Aldehyde dehydrogenase family VC0395_A1619 PF00465 Iron-containing alcohol dehydrogenase VC0395_A1620 PF01914 MarC family integral membrane protein VC0395_A1621 PF02774 Semialdehyde dehydrogenase, dimerisation domain VC0395_A1621 PF01118 Semialdehyde dehydrogenase, NAD binding domain VC0395_A1622 PF03553 Na+/H+ antiporter family VC0395_A1624 PF04245 37-kD nucleoid-associated bacterial protein VC0395_A1625 PF07208 Protein of unknown function (DUF1414) VC0395_A1626 PF11893 Domain of unknown function (DUF3413) VC0395_A1626 PF00884 Sulfatase VC0395_A1629 PF00850 Histone deacetylase domain VC0395_A1630 PF01131 DNA topoisomerase VC0395_A1630 PF01751 Toprim domain VC0395_A1631 PF00462 Glutaredoxin VC0395_A1632 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VC0395_A1632 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VC0395_A1636 PF04333 MlaA lipoprotein VC0395_A1638 PF03918 Cytochrome C biogenesis protein VC0395_A1639 PF08534 Redoxin VC0395_A1640 PF01578 Cytochrome C assembly protein VC0395_A1640 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VC0395_A1641 PF03100 CcmE VC0395_A1642 PF04995 Heme exporter protein D (CcmD) VC0395_A1643 PF01578 Cytochrome C assembly protein VC0395_A1644 PF03379 CcmB protein VC0395_A1645 PF00005 ABC transporter VC0395_A1647 PF01584 CheW-like domain VC0395_A1649 PF13614 AAA domain VC0395_A1650 PF01339 CheB methylesterase VC0395_A1650 PF00072 Response regulator receiver domain VC0395_A1651 PF02895 Signal transducing histidine kinase, homodimeric domain VC0395_A1651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1651 PF01584 CheW-like domain VC0395_A1651 PF07194 P2 response regulator binding domain VC0395_A1651 PF01627 Hpt domain VC0395_A1652 PF04344 Chemotaxis phosphatase, CheZ VC0395_A1653 PF00072 Response regulator receiver domain VC0395_A1654 PF04545 Sigma-70, region 4 VC0395_A1654 PF04539 Sigma-70 region 3 VC0395_A1654 PF04542 Sigma-70 region 2 VC0395_A1655 PF10609 NUBPL iron-transfer P-loop NTPase VC0395_A1656 PF00448 SRP54-type protein, GTPase domain VC0395_A1657 PF00771 FHIPEP family VC0395_A1658 PF00300 Histidine phosphatase superfamily (branch 1) VC0395_A1660 PF05193 Peptidase M16 inactive domain VC0395_A1660 PF00675 Insulinase (Peptidase family M16) VC0395_A1661 PF03485 Arginyl tRNA synthetase N terminal domain VC0395_A1661 PF05746 DALR anticodon binding domain VC0395_A1661 PF00750 tRNA synthetases class I (R) VC0395_A1664 PF02421 Ferrous iron transport protein B VC0395_A1664 PF07664 Ferrous iron transport protein B C terminus VC0395_A1664 PF07670 Nucleoside recognition VC0395_A1665 PF04023 FeoA domain VC0395_A1666 PF02311 AraC-like ligand binding domain VC0395_A1666 PF12833 Helix-turn-helix domain VC0395_A1667 PF01297 Zinc-uptake complex component A periplasmic VC0395_A1668 PF00005 ABC transporter VC0395_A1669 PF00950 ABC 3 transport family VC0395_A1670 PF02629 CoA binding domain VC0395_A1670 PF00549 CoA-ligase VC0395_A1671 PF00549 CoA-ligase VC0395_A1671 PF08442 ATP-grasp domain VC0395_A1672 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VC0395_A1672 PF00364 Biotin-requiring enzyme VC0395_A1672 PF02817 e3 binding domain VC0395_A1673 PF16870 2-oxoglutarate dehydrogenase C-terminal VC0395_A1673 PF02779 Transketolase, pyrimidine binding domain VC0395_A1673 PF16078 2-oxoglutarate dehydrogenase N-terminus VC0395_A1673 PF00676 Dehydrogenase E1 component VC0395_A1674 PF13085 2Fe-2S iron-sulfur cluster binding domain VC0395_A1675 PF00890 FAD binding domain VC0395_A1675 PF02910 Fumarate reductase flavoprotein C-term VC0395_A1676 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VC0395_A1677 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VC0395_A1678 PF00285 Citrate synthase, C-terminal domain VC0395_A1679 PF01784 NIF3 (NGG1p interacting factor 3) VC0395_A1681 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC0395_A1681 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VC0395_A1681 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC0395_A1681 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC0395_A1682 PF03925 SeqA protein C-terminal domain VC0395_A1682 PF17206 SeqA protein N-terminal domain VC0395_A1683 PF12697 Alpha/beta hydrolase family VC0395_A1685 PF00258 Flavodoxin VC0395_A1686 PF04172 LrgB-like family VC0395_A1687 PF03788 LrgA family VC0395_A1688 PF03466 LysR substrate binding domain VC0395_A1688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A1690 PF01475 Ferric uptake regulator family VC0395_A1691 PF01118 Semialdehyde dehydrogenase, NAD binding domain VC0395_A1691 PF02774 Semialdehyde dehydrogenase, dimerisation domain VC0395_A1692 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VC0395_A1692 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC0395_A1692 PF11890 Domain of unknown function (DUF3410) VC0395_A1693 PF02801 Beta-ketoacyl synthase, C-terminal domain VC0395_A1693 PF00109 Beta-ketoacyl synthase, N-terminal domain VC0395_A1694 PF01266 FAD dependent oxidoreductase VC0395_A1694 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VC0395_A1695 PF03358 NADPH-dependent FMN reductase VC0395_A1696 PF08891 YfcL protein VC0395_A1697 PF04315 Elongation factor P hydroxylase VC0395_A1698 PF03458 UPF0126 domain VC0395_A1699 PF01264 Chorismate synthase VC0395_A1700 PF05175 Methyltransferase small domain VC0395_A1701 PF01713 Smr domain VC0395_A1702 PF01312 FlhB HrpN YscU SpaS Family VC0395_A1703 PF01311 Bacterial export proteins, family 1 VC0395_A1704 PF01313 Bacterial export proteins, family 3 VC0395_A1705 PF00813 FliP family VC0395_A1706 PF04347 Flagellar biosynthesis protein, FliO VC0395_A1708 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VC0395_A1709 PF02154 Flagellar motor switch protein FliM VC0395_A1709 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VC0395_A1710 PF03748 Flagellar basal body-associated protein FliL VC0395_A1714 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC0395_A1714 PF18269 T3SS EscN ATPase C-terminal domain VC0395_A1715 PF02108 Flagellar assembly protein FliH VC0395_A1716 PF14842 FliG N-terminal domain VC0395_A1716 PF14841 FliG middle domain VC0395_A1716 PF01706 FliG C-terminal domain VC0395_A1717 PF08345 Flagellar M-ring protein C-terminal VC0395_A1717 PF01514 Secretory protein of YscJ/FliF family VC0395_A1718 PF02049 Flagellar hook-basal body complex protein FliE VC0395_A1719 PF00072 Response regulator receiver domain VC0395_A1719 PF00158 Sigma-54 interaction domain VC0395_A1719 PF02954 Bacterial regulatory protein, Fis family VC0395_A1720 PF13493 Domain of unknown function (DUF4118) VC0395_A1720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1720 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A1720 PF08447 PAS fold VC0395_A1720 PF13426 PAS domain VC0395_A1720 PF00989 PAS fold VC0395_A1721 PF00158 Sigma-54 interaction domain VC0395_A1721 PF00072 Response regulator receiver domain VC0395_A1721 PF02954 Bacterial regulatory protein, Fis family VC0395_A1722 PF02561 Flagellar protein FliS VC0395_A1724 PF02465 Flagellar hook-associated protein 2 N-terminus VC0395_A1724 PF07195 Flagellar hook-associated protein 2 C-terminus VC0395_A1724 PF07196 Flagellin hook IN motif VC0395_A1725 PF03646 FlaG protein VC0395_A1726 PF07196 Flagellin hook IN motif VC0395_A1726 PF00700 Bacterial flagellin C-terminal helical region VC0395_A1726 PF00669 Bacterial flagellin N-terminal helical region VC0395_A1727 PF00700 Bacterial flagellin C-terminal helical region VC0395_A1727 PF00669 Bacterial flagellin N-terminal helical region VC0395_A1727 PF07196 Flagellin hook IN motif VC0395_A1728 PF00700 Bacterial flagellin C-terminal helical region VC0395_A1728 PF07196 Flagellin hook IN motif VC0395_A1728 PF00669 Bacterial flagellin N-terminal helical region VC0395_A1729 PF04261 Dyp-type peroxidase family VC0395_A1730 PF11143 Protein of unknown function (DUF2919) VC0395_A1733 PF03960 ArsC family VC0395_A1734 PF07687 Peptidase dimerisation domain VC0395_A1734 PF01546 Peptidase family M20/M25/M40 VC0395_A1735 PF02557 D-alanyl-D-alanine carboxypeptidase VC0395_A1737 PF06804 NlpB/DapX lipoprotein VC0395_A1738 PF00701 Dihydrodipicolinate synthetase family VC0395_A1740 PF00578 AhpC/TSA family VC0395_A1741 PF02743 Cache domain VC0395_A1741 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A1741 PF00672 HAMP domain VC0395_A1742 PF01594 AI-2E family transporter VC0395_A1744 PF01435 Peptidase family M48 VC0395_A1744 PF13181 Tetratricopeptide repeat VC0395_A1745 PF03960 ArsC family VC0395_A1746 PF03358 NADPH-dependent FMN reductase VC0395_A1749 PF00860 Permease family VC0395_A1750 PF04073 Aminoacyl-tRNA editing domain VC0395_A1751 PF00149 Calcineurin-like phosphoesterase VC0395_A1751 PF02872 5'-nucleotidase, C-terminal domain VC0395_A1752 PF00793 DAHP synthetase I family VC0395_A1753 PF13369 Transglutaminase-like superfamily VC0395_A1754 PF04247 Invasion gene expression up-regulator, SirB VC0395_A1755 PF13847 Methyltransferase domain VC0395_A1755 PF17827 PrmC N-terminal domain VC0395_A1756 PF00472 RF-1 domain VC0395_A1756 PF03462 PCRF domain VC0395_A1757 PF01488 Shikimate / quinate 5-dehydrogenase VC0395_A1757 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VC0395_A1757 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VC0395_A1758 PF03550 Outer membrane lipoprotein LolB VC0395_A1759 PF08544 GHMP kinases C terminal VC0395_A1759 PF00288 GHMP kinases N terminal domain VC0395_A1760 PF14572 Phosphoribosyl synthetase-associated domain VC0395_A1760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VC0395_A1761 PF01195 Peptidyl-tRNA hydrolase VC0395_A1762 PF06071 Protein of unknown function (DUF933) VC0395_A1762 PF01926 50S ribosome-binding GTPase VC0395_A1777 PF01797 Transposase IS200 like VC0395_A1779 PF00669 Bacterial flagellin N-terminal helical region VC0395_A1779 PF00700 Bacterial flagellin C-terminal helical region VC0395_A1779 PF07196 Flagellin hook IN motif VC0395_A1780 PF00669 Bacterial flagellin N-terminal helical region VC0395_A1780 PF07196 Flagellin hook IN motif VC0395_A1780 PF00700 Bacterial flagellin C-terminal helical region VC0395_A1783 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC0395_A1783 PF07196 Flagellin hook IN motif VC0395_A1784 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VC0395_A1784 PF10135 Rod binding protein VC0395_A1785 PF02119 Flagellar P-ring protein VC0395_A1786 PF02107 Flagellar L-ring protein VC0395_A1787 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC0395_A1787 PF00460 Flagella basal body rod protein VC0395_A1788 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC0395_A1788 PF00460 Flagella basal body rod protein VC0395_A1789 PF07559 Flagellar basal body protein FlaE VC0395_A1789 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC0395_A1789 PF00460 Flagella basal body rod protein VC0395_A1790 PF03963 Flagellar hook capping protein - N-terminal region VC0395_A1790 PF13860 FlgD Ig-like domain VC0395_A1790 PF13861 FlgD Tudor-like domain VC0395_A1791 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC0395_A1791 PF00460 Flagella basal body rod protein VC0395_A1792 PF00460 Flagella basal body rod protein VC0395_A1793 PF01739 CheR methyltransferase, SAM binding domain VC0395_A1793 PF03705 CheR methyltransferase, all-alpha domain VC0395_A1794 PF01584 CheW-like domain VC0395_A1794 PF00072 Response regulator receiver domain VC0395_A1801 PF00501 AMP-binding enzyme VC0395_A1801 PF08242 Methyltransferase domain VC0395_A1801 PF00550 Phosphopantetheine attachment site VC0395_A1801 PF00668 Condensation domain VC0395_A1802 PF08021 Siderophore-interacting FAD-binding domain VC0395_A1802 PF04954 Siderophore-interacting protein VC0395_A1803 PF07715 TonB-dependent Receptor Plug Domain VC0395_A1805 PF00691 OmpA family VC0395_A1805 PF01389 OmpA-like transmembrane domain VC0395_A1806 PF00749 tRNA synthetases class I (E and Q), catalytic domain VC0395_A1807 PF00403 Heavy-metal-associated domain VC0395_A1809 PF02838 Glycosyl hydrolase family 20, domain 2 VC0395_A1809 PF00728 Glycosyl hydrolase family 20, catalytic domain VC0395_A1809 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VC0395_A1809 PF03173 Putative carbohydrate binding domain VC0395_A1812 PF01963 TraB family VC0395_A1815 PF01713 Smr domain VC0395_A1816 PF01479 S4 domain VC0395_A1816 PF00849 RNA pseudouridylate synthase VC0395_A1817 PF08448 PAS fold VC0395_A1817 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1819 PF00586 AIR synthase related protein, N-terminal domain VC0395_A1819 PF02769 AIR synthase related protein, C-terminal domain VC0395_A1820 PF00551 Formyl transferase VC0395_A1821 PF13230 Glutamine amidotransferases class-II VC0395_A1822 PF13580 SIS domain VC0395_A1823 PF02770 Acyl-CoA dehydrogenase, middle domain VC0395_A1823 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VC0395_A1823 PF09317 Domain of unknown function (DUF1974) VC0395_A1823 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VC0395_A1825 PF00929 Exonuclease VC0395_A1826 PF00075 RNase H VC0395_A1827 PF08241 Methyltransferase domain VC0395_A1828 PF16123 Hydroxyacylglutathione hydrolase C-terminus VC0395_A1828 PF00753 Metallo-beta-lactamase superfamily VC0395_A1829 PF01476 LysM domain VC0395_A1829 PF01464 Transglycosylase SLT domain VC0395_A1830 PF03372 Endonuclease/Exonuclease/phosphatase family VC0395_A1831 PF00543 Nitrogen regulatory protein P-II VC0395_A1832 PF05870 Phenolic acid decarboxylase (PAD) VC0395_A1833 PF00034 Cytochrome c VC0395_A1834 PF01171 PP-loop family VC0395_A1834 PF11734 TilS substrate C-terminal domain VC0395_A1834 PF09179 TilS substrate binding domain VC0395_A1835 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VC0395_A1836 PF07733 Bacterial DNA polymerase III alpha NTPase domain VC0395_A1836 PF02811 PHP domain VC0395_A1836 PF01336 OB-fold nucleic acid binding domain VC0395_A1836 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VC0395_A1836 PF14579 Helix-hairpin-helix motif VC0395_A1837 PF01351 Ribonuclease HII VC0395_A1838 PF02684 Lipid-A-disaccharide synthetase VC0395_A1839 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_A1839 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VC0395_A1840 PF07977 FabA-like domain VC0395_A1841 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VC0395_A1841 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_A1842 PF03938 Outer membrane protein (OmpH-like) VC0395_A1843 PF01103 Surface antigen VC0395_A1843 PF07244 Surface antigen variable number repeat VC0395_A1844 PF17820 PDZ domain VC0395_A1844 PF02163 Peptidase family M50 VC0395_A1845 PF13288 DXP reductoisomerase C-terminal domain VC0395_A1845 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VC0395_A1845 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VC0395_A1847 PF01255 Putative undecaprenyl diphosphate synthase VC0395_A1848 PF01765 Ribosome recycling factor VC0395_A1849 PF00696 Amino acid kinase family VC0395_A1850 PF00889 Elongation factor TS VC0395_A1851 PF00318 Ribosomal protein S2 VC0395_A1852 PF00557 Metallopeptidase family M24 VC0395_A1853 PF01966 HD domain VC0395_A1853 PF08335 GlnD PII-uridylyltransferase VC0395_A1853 PF01909 Nucleotidyltransferase domain VC0395_A1854 PF11944 Protein of unknown function (DUF3461) VC0395_A1855 PF04608 Phosphatidylglycerophosphatase A VC0395_A1856 PF02769 AIR synthase related protein, C-terminal domain VC0395_A1856 PF00586 AIR synthase related protein, N-terminal domain VC0395_A1857 PF01029 NusB family VC0395_A1858 PF00885 6,7-dimethyl-8-ribityllumazine synthase VC0395_A1859 PF00925 GTP cyclohydrolase II VC0395_A1859 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VC0395_A1860 PF00677 Lumazine binding domain VC0395_A1861 PF01872 RibD C-terminal domain VC0395_A1861 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VC0395_A1862 PF03477 ATP cone domain VC0395_A1863 PF00171 Aldehyde dehydrogenase family VC0395_A1864 PF01472 PUA domain VC0395_A1864 PF00696 Amino acid kinase family VC0395_A1865 PF07417 Sigma factor-binding transcriptional regulator Crl VC0395_A1867 PF00156 Phosphoribosyl transferase domain VC0395_A1868 PF00860 Permease family VC0395_A1869 PF07687 Peptidase dimerisation domain VC0395_A1869 PF01546 Peptidase family M20/M25/M40 VC0395_A1870 PF08443 RimK-like ATP-grasp domain VC0395_A1870 PF18030 RimK PreATP-grasp domain VC0395_A1871 PF18030 RimK PreATP-grasp domain VC0395_A1871 PF08443 RimK-like ATP-grasp domain VC0395_A1873 PF00209 Sodium:neurotransmitter symporter family VC0395_A1874 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1874 PF17158 Membrane-associated sensor, integral membrane domain VC0395_A1876 PF11798 IMS family HHH motif VC0395_A1876 PF00817 impB/mucB/samB family VC0395_A1878 PF02424 ApbE family VC0395_A1879 PF00175 Oxidoreductase NAD-binding domain VC0395_A1879 PF00970 Oxidoreductase FAD-binding domain VC0395_A1879 PF00111 2Fe-2S iron-sulfur cluster binding domain VC0395_A1880 PF02508 Rnf-Nqr subunit, membrane protein VC0395_A1881 PF02508 Rnf-Nqr subunit, membrane protein VC0395_A1882 PF04205 FMN-binding domain VC0395_A1883 PF03116 NQR2, RnfD, RnfE family VC0395_A1884 PF11973 NQRA C-terminal domain VC0395_A1884 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VC0395_A1885 PF01722 BolA-like protein VC0395_A1886 PF05175 Methyltransferase small domain VC0395_A1888 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VC0395_A1889 PF07690 Major Facilitator Superfamily VC0395_A1891 PF04545 Sigma-70, region 4 VC0395_A1891 PF04542 Sigma-70 region 2 VC0395_A1893 PF03502 Nucleoside-specific channel-forming protein, Tsx VC0395_A1894 PF08546 Ketopantoate reductase PanE/ApbA C terminal VC0395_A1894 PF02558 Ketopantoate reductase PanE/ApbA VC0395_A1895 PF01965 DJ-1/PfpI family VC0395_A1896 PF00266 Aminotransferase class-V VC0395_A1897 PF02657 Fe-S metabolism associated domain VC0395_A1898 PF00899 ThiF family VC0395_A1899 PF03562 MltA specific insert domain VC0395_A1899 PF06725 3D domain VC0395_A1901 PF00583 Acetyltransferase (GNAT) family VC0395_A1901 PF00696 Amino acid kinase family VC0395_A1903 PF13538 UvrD-like helicase C-terminal domain VC0395_A1904 PF13361 UvrD-like helicase C-terminal domain VC0395_A1904 PF00580 UvrD/REP helicase N-terminal domain VC0395_A1904 PF12705 PD-(D/E)XK nuclease superfamily VC0395_A1905 PF17946 RecC C-terminal domain VC0395_A1908 PF07130 YebG protein VC0395_A1909 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VC0395_A1909 PF14602 Hexapeptide repeat of succinyl-transferase VC0395_A1911 PF00583 Acetyltransferase (GNAT) family VC0395_A1912 PF18030 RimK PreATP-grasp domain VC0395_A1912 PF08443 RimK-like ATP-grasp domain VC0395_A1912 PF02080 TrkA-C domain VC0395_A1913 PF01544 CorA-like Mg2+ transporter protein VC0395_A1914 PF01588 Putative tRNA binding domain VC0395_A1916 PF00356 Bacterial regulatory proteins, lacI family VC0395_A1917 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VC0395_A1917 PF00703 Glycosyl hydrolases family 2 VC0395_A1917 PF02837 Glycosyl hydrolases family 2, sugar binding domain VC0395_A1917 PF16353 Domain of unknown function(DUF4981) VC0395_A1917 PF02929 Beta galactosidase small chain VC0395_A1919 PF00072 Response regulator receiver domain VC0395_A1920 PF00501 AMP-binding enzyme VC0395_A1921 PF14492 Elongation Factor G, domain II VC0395_A1921 PF03144 Elongation factor Tu domain 2 VC0395_A1921 PF00679 Elongation factor G C-terminus VC0395_A1921 PF03764 Elongation factor G, domain IV VC0395_A1921 PF00009 Elongation factor Tu GTP binding domain VC0395_A1922 PF18073 Rubredoxin metal binding domain VC0395_A1924 PF18429 Domain of unknown function (DUF5609) VC0395_A1926 PF01048 Phosphorylase superfamily VC0395_A1927 PF01676 Metalloenzyme superfamily VC0395_A1928 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VC0395_A1928 PF00591 Glycosyl transferase family, a/b domain VC0395_A1928 PF02885 Glycosyl transferase family, helical bundle domain VC0395_A1929 PF01791 DeoC/LacD family aldolase VC0395_A1931 PF07662 Na+ dependent nucleoside transporter C-terminus VC0395_A1931 PF07670 Nucleoside recognition VC0395_A1931 PF01773 Na+ dependent nucleoside transporter N-terminus VC0395_A1932 PF01026 TatD related DNase VC0395_A1934 PF03883 Peroxide stress protein YaaA VC0395_A1935 PF01235 Sodium:alanine symporter family VC0395_A1938 PF03167 Uracil DNA glycosylase superfamily VC0395_A1939 PF01261 Xylose isomerase-like TIM barrel VC0395_A1940 PF01228 Glycine radical VC0395_A1941 PF14821 Threonine synthase N terminus VC0395_A1941 PF00291 Pyridoxal-phosphate dependent enzyme VC0395_A1942 PF08544 GHMP kinases C terminal VC0395_A1942 PF00288 GHMP kinases N terminal domain VC0395_A1943 PF01842 ACT domain VC0395_A1943 PF13840 ACT domain VC0395_A1943 PF00696 Amino acid kinase family VC0395_A1943 PF00742 Homoserine dehydrogenase VC0395_A1943 PF03447 Homoserine dehydrogenase, NAD binding domain VC0395_A1944 PF03737 Aldolase/RraA VC0395_A1947 PF00486 Transcriptional regulatory protein, C terminal VC0395_A1947 PF00072 Response regulator receiver domain VC0395_A1948 PF18415 Histidine kinase receptor ArcB trans-membrane domain VC0395_A1948 PF00989 PAS fold VC0395_A1948 PF01627 Hpt domain VC0395_A1948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A1948 PF00072 Response regulator receiver domain VC0395_A1948 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A1949 PF00563 EAL domain VC0395_A1949 PF01590 GAF domain VC0395_A1949 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A1949 PF00360 Phytochrome region VC0395_A1950 PF16199 Radical_SAM C-terminal domain VC0395_A1950 PF04055 Radical SAM superfamily VC0395_A1952 PF01493 GXGXG motif VC0395_A1952 PF00310 Glutamine amidotransferases class-II VC0395_A1952 PF04898 Glutamate synthase central domain VC0395_A1952 PF01645 Conserved region in glutamate synthase VC0395_A1953 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VC0395_A1953 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A1954 PF01645 Conserved region in glutamate synthase VC0395_A1954 PF01493 GXGXG motif VC0395_A1954 PF00310 Glutamine amidotransferases class-II VC0395_A1954 PF04898 Glutamate synthase central domain VC0395_A1955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VC0395_A1955 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A1957 PF01048 Phosphorylase superfamily VC0395_A1959 PF01497 Periplasmic binding protein VC0395_A1960 PF03458 UPF0126 domain VC0395_A1961 PF01925 Sulfite exporter TauE/SafE VC0395_A1962 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VC0395_A1963 PF00005 ABC transporter VC0395_A1967 PF02142 MGS-like domain VC0395_A1967 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VC0395_A1967 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VC0395_A1968 PF00117 Glutamine amidotransferase class-I VC0395_A1968 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VC0395_A1970 PF05173 Dihydrodipicolinate reductase, C-terminus VC0395_A1970 PF01113 Dihydrodipicolinate reductase, N-terminus VC0395_A1971 PF00293 NUDIX domain VC0395_A1972 PF01043 SecA preprotein cross-linking domain VC0395_A1972 PF02810 SEC-C motif VC0395_A1972 PF07517 SecA DEAD-like domain VC0395_A1972 PF07516 SecA Wing and Scaffold domain VC0395_A1974 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VC0395_A1975 PF00091 Tubulin/FtsZ family, GTPase domain VC0395_A1975 PF12327 FtsZ family, C-terminal domain VC0395_A1976 PF02491 SHS2 domain inserted in FTSA VC0395_A1977 PF08478 POTRA domain, FtsQ-type VC0395_A1977 PF03799 Cell division protein FtsQ VC0395_A1978 PF01225 Mur ligase family, catalytic domain VC0395_A1978 PF02875 Mur ligase family, glutamate ligase domain VC0395_A1978 PF08245 Mur ligase middle domain VC0395_A1979 PF03033 Glycosyltransferase family 28 N-terminal domain VC0395_A1979 PF04101 Glycosyltransferase family 28 C-terminal domain VC0395_A1980 PF01098 Cell cycle protein VC0395_A1981 PF08245 Mur ligase middle domain VC0395_A1981 PF02875 Mur ligase family, glutamate ligase domain VC0395_A1982 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VC0395_A1982 PF00953 Glycosyl transferase family 4 VC0395_A1983 PF01225 Mur ligase family, catalytic domain VC0395_A1983 PF02875 Mur ligase family, glutamate ligase domain VC0395_A1983 PF08245 Mur ligase middle domain VC0395_A1984 PF08245 Mur ligase middle domain VC0395_A1984 PF01225 Mur ligase family, catalytic domain VC0395_A1984 PF02875 Mur ligase family, glutamate ligase domain VC0395_A1985 PF03717 Penicillin-binding Protein dimerisation domain VC0395_A1985 PF00905 Penicillin binding protein transpeptidase domain VC0395_A1986 PF04999 Cell division protein FtsL VC0395_A1987 PF01795 MraW methylase family VC0395_A1988 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A1988 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC0395_A1989 PF00364 Biotin-requiring enzyme VC0395_A1989 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VC0395_A1989 PF02817 e3 binding domain VC0395_A1990 PF00456 Transketolase, thiamine diphosphate binding domain VC0395_A1990 PF17831 Pyruvate dehydrogenase E1 component middle domain VC0395_A1991 PF07729 FCD domain VC0395_A1991 PF00392 Bacterial regulatory proteins, gntR family VC0395_A1992 PF02872 5'-nucleotidase, C-terminal domain VC0395_A1992 PF00149 Calcineurin-like phosphoesterase VC0395_A1993 PF01368 DHH family VC0395_A1993 PF02272 DHHA1 domain VC0395_A1993 PF17768 RecJ OB domain VC0395_A1994 PF10411 Disulfide bond isomerase protein N-terminus VC0395_A1994 PF13098 Thioredoxin-like domain VC0395_A1995 PF02899 Phage integrase, N-terminal SAM-like domain VC0395_A1995 PF00589 Phage integrase family VC0395_A1996 PF00258 Flavodoxin VC0395_A1997 PF01510 N-acetylmuramoyl-L-alanine amidase VC0395_A1998 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VC0395_A1998 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VC0395_A1999 PF07963 Prokaryotic N-terminal methylation motif VC0395_A1999 PF00114 Pilin (bacterial filament) VC0395_A2000 PF00437 Type II/IV secretion system protein VC0395_A2000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VC0395_A2001 PF00482 Type II secretion system (T2SS), protein F VC0395_A2002 PF01478 Type IV leader peptidase family VC0395_A2002 PF06750 Bacterial Peptidase A24 N-terminal domain VC0395_A2003 PF01121 Dephospho-CoA kinase VC0395_A2005 PF07072 Cell division protein VC0395_A2006 PF03884 DNA gyrase inhibitor YacG VC0395_A2007 PF03989 DNA gyrase C-terminal domain, beta-propeller VC0395_A2007 PF00521 DNA gyrase/topoisomerase IV, subunit A VC0395_A2008 PF00986 DNA gyrase B subunit, carboxyl terminus VC0395_A2008 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A2008 PF01751 Toprim domain VC0395_A2008 PF00204 DNA gyrase B VC0395_A2009 PF05728 Uncharacterised protein family (UPF0227) VC0395_A2010 PF00149 Calcineurin-like phosphoesterase VC0395_A2011 PF06853 Protein of unknown function (DUF1249) VC0395_A2012 PF00293 NUDIX domain VC0395_A2013 PF02321 Outer membrane efflux protein VC0395_A2014 PF00294 pfkB family carbohydrate kinase VC0395_A2014 PF01467 Cytidylyltransferase-like VC0395_A2015 PF03710 Glutamate-ammonia ligase adenylyltransferase VC0395_A2015 PF08335 GlnD PII-uridylyltransferase VC0395_A2016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A2016 PF00672 HAMP domain VC0395_A2016 PF02743 Cache domain VC0395_A2018 PF01928 CYTH domain VC0395_A2019 PF01865 Protein of unknown function DUF47 VC0395_A2020 PF01384 Phosphate transporter family VC0395_A2021 PF08239 Bacterial SH3 domain VC0395_A2023 PF01471 Putative peptidoglycan binding domain VC0395_A2023 PF13401 AAA domain VC0395_A2024 PF01966 HD domain VC0395_A2024 PF01743 Poly A polymerase head domain VC0395_A2024 PF12627 Probable RNA and SrmB- binding site of polymerase A VC0395_A2025 PF03952 Enolase, N-terminal domain VC0395_A2025 PF00113 Enolase, C-terminal TIM barrel domain VC0395_A2026 PF00117 Glutamine amidotransferase class-I VC0395_A2026 PF06418 CTP synthase N-terminus VC0395_A2028 PF03819 MazG nucleotide pyrophosphohydrolase domain VC0395_A2029 PF02824 TGS domain VC0395_A2029 PF04607 Region found in RelA / SpoT proteins VC0395_A2029 PF13291 ACT domain VC0395_A2030 PF05958 tRNA (Uracil-5-)-methyltransferase VC0395_A2030 PF01938 TRAM domain VC0395_A2031 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A2032 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VC0395_A2032 PF01627 Hpt domain VC0395_A2032 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A2032 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A2032 PF00072 Response regulator receiver domain VC0395_A2032 PF00672 HAMP domain VC0395_A2035 PF01648 4'-phosphopantetheinyl transferase superfamily VC0395_A2036 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VC0395_A2037 PF02565 Recombination protein O C terminal VC0395_A2037 PF11967 Recombination protein O N terminal VC0395_A2038 PF07650 KH domain VC0395_A2038 PF01926 50S ribosome-binding GTPase VC0395_A2039 PF00035 Double-stranded RNA binding motif VC0395_A2039 PF14622 Ribonuclease-III-like VC0395_A2040 PF10502 Signal peptidase, peptidase S26 VC0395_A2041 PF00679 Elongation factor G C-terminus VC0395_A2041 PF06421 GTP-binding protein LepA C-terminus VC0395_A2041 PF03144 Elongation factor Tu domain 2 VC0395_A2041 PF00009 Elongation factor Tu GTP binding domain VC0395_A2043 PF17188 MucB/RseB C-terminal domain VC0395_A2043 PF03888 MucB/RseB N-terminal domain VC0395_A2044 PF03872 Anti sigma-E protein RseA, N-terminal domain VC0395_A2044 PF03873 Anti sigma-E protein RseA, C-terminal domain VC0395_A2045 PF08281 Sigma-70, region 4 VC0395_A2045 PF04542 Sigma-70 region 2 VC0395_A2046 PF00890 FAD binding domain VC0395_A2046 PF02910 Fumarate reductase flavoprotein C-term VC0395_A2048 PF03937 Flavinator of succinate dehydrogenase VC0395_A2051 PF01494 FAD binding domain VC0395_A2052 PF01494 FAD binding domain VC0395_A2053 PF03695 Uncharacterised protein family (UPF0149) VC0395_A2054 PF05164 Cell division protein ZapA VC0395_A2055 PF01812 5-formyltetrahydrofolate cyclo-ligase family VC0395_A2056 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VC0395_A2057 PF01842 ACT domain VC0395_A2057 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC0395_A2057 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VC0395_A2058 PF10369 Small subunit of acetolactate synthase VC0395_A2059 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VC0395_A2059 PF00205 Thiamine pyrophosphate enzyme, central domain VC0395_A2059 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC0395_A2060 PF00501 AMP-binding enzyme VC0395_A2061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A2061 PF03466 LysR substrate binding domain VC0395_A2063 PF01569 PAP2 superfamily VC0395_A2065 PF08502 LeuA allosteric (dimerisation) domain VC0395_A2065 PF00682 HMGL-like VC0395_A2066 PF00180 Isocitrate/isopropylmalate dehydrogenase VC0395_A2067 PF00330 Aconitase family (aconitate hydratase) VC0395_A2068 PF00694 Aconitase C-terminal domain VC0395_A2078 PF00072 Response regulator receiver domain VC0395_A2081 PF03739 Lipopolysaccharide export system permease LptF/LptG VC0395_A2082 PF03739 Lipopolysaccharide export system permease LptF/LptG VC0395_A2083 PF02789 Cytosol aminopeptidase family, N-terminal domain VC0395_A2083 PF00883 Cytosol aminopeptidase family, catalytic domain VC0395_A2084 PF04364 DNA polymerase III chi subunit, HolC VC0395_A2085 PF10458 Valyl tRNA synthetase tRNA binding arm VC0395_A2085 PF08264 Anticodon-binding domain of tRNA VC0395_A2085 PF00133 tRNA synthetases class I (I, L, M and V) VC0395_A2086 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC0395_A2086 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VC0395_A2087 PF00849 RNA pseudouridylate synthase VC0395_A2088 PF18337 RapA N-terminal Tudor like domain VC0395_A2088 PF00176 SNF2 family N-terminal domain VC0395_A2088 PF18339 RapA N-terminal Tudor like domain 1 VC0395_A2088 PF00271 Helicase conserved C-terminal domain VC0395_A2088 PF12137 RNA polymerase recycling family C-terminal VC0395_A2090 PF02562 PhoH-like protein VC0395_A2090 PF13638 PIN domain VC0395_A2091 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VC0395_A2091 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VC0395_A2092 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VC0395_A2092 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VC0395_A2093 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VC0395_A2093 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VC0395_A2094 PF01042 Endoribonuclease L-PSP VC0395_A2095 PF01553 Acyltransferase VC0395_A2096 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VC0395_A2097 PF01722 BolA-like protein VC0395_A2099 PF05494 MlaC protein VC0395_A2100 PF02470 MlaD protein VC0395_A2101 PF02405 Permease MlaE VC0395_A2102 PF00005 ABC transporter VC0395_A2103 PF01699 Sodium/calcium exchanger protein VC0395_A2104 PF00571 CBS domain VC0395_A2104 PF01380 SIS domain VC0395_A2107 PF03968 OstA-like protein VC0395_A2108 PF12399 Branched-chain amino acid ATP-binding cassette transporter VC0395_A2108 PF00005 ABC transporter VC0395_A2109 PF04963 Sigma-54 factor, core binding domain VC0395_A2109 PF00309 Sigma-54 factor, Activator interacting domain (AID) VC0395_A2109 PF04552 Sigma-54, DNA binding domain VC0395_A2110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VC0395_A2111 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC0395_A2112 PF03668 P-loop ATPase protein family VC0395_A2113 PF00381 PTS HPr component phosphorylation site VC0395_A2114 PF03448 MgtE intracellular N domain VC0395_A2114 PF01769 Divalent cation transporter VC0395_A2114 PF00571 CBS domain VC0395_A2115 PF01523 Putative modulator of DNA gyrase VC0395_A2116 PF04751 Protein of unknown function (DUF615) VC0395_A2117 PF00005 ABC transporter VC0395_A2118 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A2120 PF02441 Flavoprotein VC0395_A2121 PF02875 Mur ligase family, glutamate ligase domain VC0395_A2121 PF08245 Mur ligase middle domain VC0395_A2121 PF01225 Mur ligase family, catalytic domain VC0395_A2122 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VC0395_A2123 PF00719 Inorganic pyrophosphatase VC0395_A2124 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VC0395_A2125 PF04357 TamB, inner membrane protein subunit of TAM complex VC0395_A2126 PF17243 POTRA domain TamA domain 1 VC0395_A2126 PF07244 Surface antigen variable number repeat VC0395_A2126 PF01103 Surface antigen VC0395_A2127 PF01625 Peptide methionine sulfoxide reductase VC0395_A2128 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VC0395_A2129 PF10795 Protein of unknown function (DUF2607) VC0395_A2131 PF00005 ABC transporter VC0395_A2131 PF12704 MacB-like periplasmic core domain VC0395_A2131 PF02687 FtsX-like permease family VC0395_A2136 PF00009 Elongation factor Tu GTP binding domain VC0395_A2137 PF01507 Phosphoadenosine phosphosulfate reductase family VC0395_A2138 PF14824 Sirohaem biosynthesis protein central VC0395_A2138 PF10414 Sirohaem synthase dimerisation region VC0395_A2138 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VC0395_A2139 PF00149 Calcineurin-like phosphoesterase VC0395_A2139 PF02872 5'-nucleotidase, C-terminal domain VC0395_A2141 PF00270 DEAD/DEAH box helicase VC0395_A2141 PF00271 Helicase conserved C-terminal domain VC0395_A2141 PF03880 DbpA RNA binding domain VC0395_A2142 PF13673 Acetyltransferase (GNAT) domain VC0395_A2143 PF00892 EamA-like transporter family VC0395_A2145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC0395_A2145 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VC0395_A2146 PF01797 Transposase IS200 like VC0395_A2148 PF01196 Ribosomal protein L17 VC0395_A2149 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VC0395_A2149 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VC0395_A2149 PF01000 RNA polymerase Rpb3/RpoA insert domain VC0395_A2150 PF00163 Ribosomal protein S4/S9 N-terminal domain VC0395_A2150 PF01479 S4 domain VC0395_A2151 PF00411 Ribosomal protein S11 VC0395_A2152 PF00416 Ribosomal protein S13/S18 VC0395_A2153 PF00444 Ribosomal protein L36 VC0395_A2154 PF00344 SecY translocase VC0395_A2155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VC0395_A2156 PF00327 Ribosomal protein L30p/L7e VC0395_A2157 PF00333 Ribosomal protein S5, N-terminal domain VC0395_A2157 PF03719 Ribosomal protein S5, C-terminal domain VC0395_A2158 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VC0395_A2159 PF00347 Ribosomal protein L6 VC0395_A2160 PF00410 Ribosomal protein S8 VC0395_A2161 PF00253 Ribosomal protein S14p/S29e VC0395_A2162 PF00281 Ribosomal protein L5 VC0395_A2162 PF00673 ribosomal L5P family C-terminus VC0395_A2163 PF00467 KOW motif VC0395_A2163 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VC0395_A2164 PF00238 Ribosomal protein L14p/L23e VC0395_A2165 PF00366 Ribosomal protein S17 VC0395_A2166 PF00831 Ribosomal L29 protein VC0395_A2167 PF00252 Ribosomal protein L16p/L10e VC0395_A2168 PF07650 KH domain VC0395_A2168 PF00189 Ribosomal protein S3, C-terminal domain VC0395_A2169 PF00237 Ribosomal protein L22p/L17e VC0395_A2170 PF00203 Ribosomal protein S19 VC0395_A2171 PF03947 Ribosomal Proteins L2, C-terminal domain VC0395_A2171 PF00181 Ribosomal Proteins L2, RNA binding domain VC0395_A2172 PF00276 Ribosomal protein L23 VC0395_A2173 PF00573 Ribosomal protein L4/L1 family VC0395_A2174 PF00297 Ribosomal protein L3 VC0395_A2175 PF00338 Ribosomal protein S10p/S20e VC0395_A2176 PF08032 RNA 2'-O ribose methyltransferase substrate binding VC0395_A2176 PF00588 SpoU rRNA Methylase family VC0395_A2177 PF17876 Cold shock domain VC0395_A2177 PF00575 S1 RNA binding domain VC0395_A2177 PF08461 Ribonuclease R winged-helix domain VC0395_A2177 PF00773 RNB domain VC0395_A2177 PF08206 Ribonuclease B OB domain VC0395_A2178 PF00884 Sulfatase VC0395_A2178 PF11893 Domain of unknown function (DUF3413) VC0395_A2179 PF08238 Sel1 repeat VC0395_A2180 PF00709 Adenylosuccinate synthetase VC0395_A2181 PF01112 Asparaginase VC0395_A2182 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC0395_A2184 PF00999 Sodium/hydrogen exchanger family VC0395_A2184 PF02254 TrkA-N domain VC0395_A2185 PF02525 Flavodoxin-like fold VC0395_A2186 PF12848 ABC transporter VC0395_A2186 PF00005 ABC transporter VC0395_A2188 PF00561 alpha/beta hydrolase fold VC0395_A2189 PF06794 Uncharacterised protein family (UPF0270) VC0395_A2190 PF00485 Phosphoribulokinase / Uridine kinase family VC0395_A2191 PF00027 Cyclic nucleotide-binding domain VC0395_A2191 PF13545 Crp-like helix-turn-helix domain VC0395_A2193 PF00171 Aldehyde dehydrogenase family VC0395_A2194 PF04958 Arginine N-succinyltransferase beta subunit VC0395_A2195 PF00202 Aminotransferase class-III VC0395_A2196 PF00117 Glutamine amidotransferase class-I VC0395_A2197 PF00919 Uncharacterized protein family UPF0004 VC0395_A2197 PF18693 TRAM domain VC0395_A2197 PF04055 Radical SAM superfamily VC0395_A2200 PF00579 tRNA synthetases class I (W and Y) VC0395_A2201 PF13419 Haloacid dehalogenase-like hydrolase VC0395_A2202 PF00834 Ribulose-phosphate 3 epimerase family VC0395_A2203 PF02086 D12 class N6 adenine-specific DNA methyltransferase VC0395_A2205 PF01761 3-dehydroquinate synthase VC0395_A2206 PF01202 Shikimate kinase VC0395_A2207 PF00263 Bacterial type II and III secretion system protein VC0395_A2207 PF11741 AMIN domain VC0395_A2207 PF07660 Secretin and TonB N terminus short domain VC0395_A2207 PF03958 Bacterial type II/III secretion system short domain VC0395_A2212 PF17092 Penicillin-binding protein OB-like domain VC0395_A2212 PF00912 Transglycosylase VC0395_A2212 PF00905 Penicillin binding protein transpeptidase domain VC0395_A2213 PF03466 LysR substrate binding domain VC0395_A2213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A2214 PF00462 Glutaredoxin VC0395_A2214 PF08534 Redoxin VC0395_A2215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC0395_A2215 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A2217 PF00206 Lyase VC0395_A2217 PF14698 Argininosuccinate lyase C-terminal VC0395_A2218 PF00764 Arginosuccinate synthase VC0395_A2219 PF00696 Amino acid kinase family VC0395_A2220 PF01118 Semialdehyde dehydrogenase, NAD binding domain VC0395_A2220 PF02774 Semialdehyde dehydrogenase, dimerisation domain VC0395_A2221 PF01546 Peptidase family M20/M25/M40 VC0395_A2221 PF07687 Peptidase dimerisation domain VC0395_A2222 PF00311 Phosphoenolpyruvate carboxylase VC0395_A2225 PF06426 Serine acetyltransferase, N-terminal VC0395_A2225 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_A2226 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VC0395_A2226 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VC0395_A2227 PF02556 Preprotein translocase subunit SecB VC0395_A2228 PF00581 Rhodanese-like domain VC0395_A2229 PF00152 tRNA synthetases class II (D, K and N) VC0395_A2230 PF00890 FAD binding domain VC0395_A2230 PF02910 Fumarate reductase flavoprotein C-term VC0395_A2231 PF13085 2Fe-2S iron-sulfur cluster binding domain VC0395_A2231 PF13183 4Fe-4S dicluster domain VC0395_A2232 PF02300 Fumarate reductase subunit C VC0395_A2233 PF02313 Fumarate reductase subunit D VC0395_A2234 PF08207 Elongation factor P (EF-P) KOW-like domain VC0395_A2234 PF09285 Elongation factor P, C-terminal VC0395_A2234 PF01132 Elongation factor P (EF-P) OB domain VC0395_A2235 PF04055 Radical SAM superfamily VC0395_A2237 PF00118 TCP-1/cpn60 chaperonin family VC0395_A2238 PF00166 Chaperonin 10 Kd subunit VC0395_A2239 PF00455 DeoR C terminal sensor domain VC0395_A2239 PF08220 DeoR-like helix-turn-helix domain VC0395_A2243 PF00121 Triosephosphate isomerase VC0395_A2245 PF03737 Aldolase/RraA VC0395_A2246 PF01040 UbiA prenyltransferase family VC0395_A2247 PF10431 C-terminal, D2-small domain, of ClpB protein VC0395_A2247 PF07724 AAA domain (Cdc48 subfamily) VC0395_A2247 PF00004 ATPase family associated with various cellular activities (AAA) VC0395_A2248 PF00227 Proteasome subunit VC0395_A2249 PF05036 Sporulation related domain VC0395_A2250 PF00356 Bacterial regulatory proteins, lacI family VC0395_A2251 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VC0395_A2251 PF18074 Primosomal protein N C-terminal domain VC0395_A2251 PF00270 DEAD/DEAH box helicase VC0395_A2251 PF00271 Helicase conserved C-terminal domain VC0395_A2251 PF17764 3′ DNA-binding domain (3′BD) VC0395_A2252 PF01197 Ribosomal protein L31 VC0395_A2254 PF03949 Malic enzyme, NAD binding domain VC0395_A2254 PF00390 Malic enzyme, N-terminal domain VC0395_A2255 PF01340 Met Apo-repressor, MetJ VC0395_A2256 PF01053 Cys/Met metabolism PLP-dependent enzyme VC0395_A2257 PF03447 Homoserine dehydrogenase, NAD binding domain VC0395_A2257 PF00742 Homoserine dehydrogenase VC0395_A2257 PF00696 Amino acid kinase family VC0395_A2258 PF02219 Methylenetetrahydrofolate reductase VC0395_A2259 PF06005 Cell division protein ZapB VC0395_A2260 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VC0395_A2261 PF00365 Phosphofructokinase VC0395_A2262 PF01545 Cation efflux family VC0395_A2262 PF16916 Dimerisation domain of Zinc Transporter VC0395_A2264 PF00486 Transcriptional regulatory protein, C terminal VC0395_A2264 PF00072 Response regulator receiver domain VC0395_A2265 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A2265 PF16527 Two-component sensor protein CpxA, periplasmic domain VC0395_A2265 PF00672 HAMP domain VC0395_A2265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A2266 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VC0395_A2266 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VC0395_A2267 PF00588 SpoU rRNA Methylase family VC0395_A2268 PF04186 FxsA cytoplasmic membrane protein VC0395_A2269 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A2269 PF17158 Membrane-associated sensor, integral membrane domain VC0395_A2270 PF00206 Lyase VC0395_A2270 PF10415 Fumarase C C-terminus VC0395_A2271 PF03605 Anaerobic c4-dicarboxylate membrane transporter VC0395_A2273 PF18494 Pullulanase Ins domain VC0395_A2273 PF03714 Bacterial pullanase-associated domain VC0395_A2273 PF11852 Domain of unknown function (DUF3372) VC0395_A2273 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VC0395_A2273 PF17967 Pullulanase N2 domain VC0395_A2274 PF02683 Cytochrome C biogenesis protein transmembrane region VC0395_A2274 PF11412 Disulphide bond corrector protein DsbC VC0395_A2275 PF00072 Response regulator receiver domain VC0395_A2275 PF00196 Bacterial regulatory proteins, luxR family VC0395_A2276 PF03471 Transporter associated domain VC0395_A2276 PF00999 Sodium/hydrogen exchanger family VC0395_A2276 PF02080 TrkA-C domain VC0395_A2278 PF00474 Sodium:solute symporter family VC0395_A2279 PF02592 Putative vitamin uptake transporter VC0395_A2280 PF00625 Guanylate kinase VC0395_A2281 PF01192 RNA polymerase Rpb6 VC0395_A2282 PF13291 ACT domain VC0395_A2282 PF02824 TGS domain VC0395_A2282 PF04607 Region found in RelA / SpoT proteins VC0395_A2283 PF00270 DEAD/DEAH box helicase VC0395_A2283 PF00271 Helicase conserved C-terminal domain VC0395_A2283 PF17191 RecG wedge domain VC0395_A2284 PF00860 Permease family VC0395_A2285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A2285 PF00672 HAMP domain VC0395_A2285 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A2286 PF00072 Response regulator receiver domain VC0395_A2286 PF00486 Transcriptional regulatory protein, C terminal VC0395_A2287 PF03449 Transcription elongation factor, N-terminal VC0395_A2287 PF01272 Transcription elongation factor, GreA/GreB, C-term VC0395_A2288 PF09371 Tex-like protein N-terminal domain VC0395_A2288 PF00575 S1 RNA binding domain VC0395_A2288 PF17674 HHH domain VC0395_A2288 PF16921 Tex protein YqgF-like domain VC0395_A2290 PF00561 alpha/beta hydrolase fold VC0395_A2292 PF00156 Phosphoribosyl transferase domain VC0395_A2293 PF01521 Iron-sulphur cluster biosynthesis VC0395_A2293 PF01106 NifU-like domain VC0395_A2294 PF00293 NUDIX domain VC0395_A2295 PF00459 Inositol monophosphatase family VC0395_A2296 PF01203 Type II secretion system (T2SS), protein N VC0395_A2297 PF04612 Type II secretion system (T2SS), protein M VC0395_A2298 PF05134 Type II secretion system (T2SS), protein L VC0395_A2298 PF12693 GspL periplasmic domain VC0395_A2299 PF03934 Type II secretion system (T2SS), protein K VC0395_A2300 PF07963 Prokaryotic N-terminal methylation motif VC0395_A2300 PF11612 Type II secretion system (T2SS), protein J VC0395_A2301 PF07963 Prokaryotic N-terminal methylation motif VC0395_A2301 PF02501 Type II secretion system (T2SS), protein I VC0395_A2302 PF12019 Type II transport protein GspH VC0395_A2303 PF08334 Type II secretion system (T2SS), protein G VC0395_A2303 PF07963 Prokaryotic N-terminal methylation motif VC0395_A2304 PF00482 Type II secretion system (T2SS), protein F VC0395_A2305 PF00437 Type II/IV secretion system protein VC0395_A2306 PF00263 Bacterial type II and III secretion system protein VC0395_A2306 PF03958 Bacterial type II/III secretion system short domain VC0395_A2307 PF11356 Type II secretion system protein C VC0395_A2308 PF01479 S4 domain VC0395_A2309 PF01430 Hsp33 protein VC0395_A2310 PF01293 Phosphoenolpyruvate carboxykinase VC0395_A2312 PF00583 Acetyltransferase (GNAT) family VC0395_A2312 PF09500 Putative thioesterase (yiiD_Cterm) VC0395_A2313 PF02580 D-Tyr-tRNA(Tyr) deacylase VC0395_A2314 PF03631 Virulence factor BrkB VC0395_A2315 PF03668 P-loop ATPase protein family VC0395_A2318 PF03951 Glutamine synthetase, beta-Grasp domain VC0395_A2318 PF00120 Glutamine synthetase, catalytic domain VC0395_A2320 PF00989 PAS fold VC0395_A2320 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A2320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A2321 PF00158 Sigma-54 interaction domain VC0395_A2321 PF00072 Response regulator receiver domain VC0395_A2321 PF02954 Bacterial regulatory protein, Fis family VC0395_A2322 PF00563 EAL domain VC0395_A2322 PF03707 Bacterial signalling protein N terminal repeat VC0395_A2322 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A2322 PF13188 PAS domain VC0395_A2323 PF00962 Adenosine/AMP deaminase VC0395_A2339 PF01177 Asp/Glu/Hydantoin racemase VC0395_A2341 PF05922 Peptidase inhibitor I9 VC0395_A2341 PF00082 Subtilase family VC0395_A2341 PF04151 Bacterial pre-peptidase C-terminal domain VC0395_A2342 PF00593 TonB dependent receptor VC0395_A2342 PF07715 TonB-dependent Receptor Plug Domain VC0395_A2345 PF13358 DDE superfamily endonuclease VC0395_A2349 PF01381 Helix-turn-helix VC0395_A2351 PF13657 HipA N-terminal domain VC0395_A2351 PF07804 HipA-like C-terminal domain VC0395_A2359 PF00665 Integrase core domain VC0395_A2360 PF01527 Transposase VC0395_A2362 PF02796 Helix-turn-helix domain of resolvase VC0395_A2362 PF00239 Resolvase, N terminal domain VC0395_A2367 PF05958 tRNA (Uracil-5-)-methyltransferase VC0395_A2369 PF00440 Bacterial regulatory proteins, tetR family VC0395_A2370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC0395_A2370 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A2371 PF00140 Sigma-70 factor, region 1.2 VC0395_A2371 PF04542 Sigma-70 region 2 VC0395_A2371 PF04545 Sigma-70, region 4 VC0395_A2372 PF18075 FtsX extracellular domain VC0395_A2373 PF00005 ABC transporter VC0395_A2374 PF00448 SRP54-type protein, GTPase domain VC0395_A2374 PF02881 SRP54-type protein, helical bundle domain VC0395_A2381 PF00210 Ferritin-like domain VC0395_A2383 PF08668 HDOD domain VC0395_A2383 PF00563 EAL domain VC0395_A2384 PF01810 LysE type translocator VC0395_A2385 PF12146 Serine aminopeptidase, S33 VC0395_A2389 PF08495 FIST N domain VC0395_A2389 PF10442 FIST C domain VC0395_A2389 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A2389 PF00563 EAL domain VC0395_A2390 PF13419 Haloacid dehalogenase-like hydrolase VC0395_A2391 PF02899 Phage integrase, N-terminal SAM-like domain VC0395_A2391 PF00589 Phage integrase family VC0395_A2392 PF04340 Protein of unknown function, DUF484 VC0395_A2393 PF01678 Diaminopimelate epimerase VC0395_A2394 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VC0395_A2394 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VC0395_A2396 PF01491 Frataxin-like domain VC0395_A2397 PF12633 Adenylate cyclase NT domain VC0395_A2397 PF01295 Adenylate cyclase, class-I VC0395_A2398 PF03900 Porphobilinogen deaminase, C-terminal domain VC0395_A2398 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VC0395_A2399 PF02602 Uroporphyrinogen-III synthase HemD VC0395_A2400 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VC0395_A2401 PF07219 HemY protein N-terminus VC0395_A2402 PF04055 Radical SAM superfamily VC0395_A2402 PF06969 HemN C-terminal domain VC0395_A2403 PF10675 Protein of unknown function (DUF2489) VC0395_A2404 PF04220 Der GTPase activator (YihI) VC0395_A2406 PF00034 Cytochrome c VC0395_A2407 PF01926 50S ribosome-binding GTPase VC0395_A2409 PF01367 5'-3' exonuclease, C-terminal SAM fold VC0395_A2409 PF01612 3'-5' exonuclease VC0395_A2409 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VC0395_A2409 PF00476 DNA polymerase family A VC0395_A2413 PF00490 Delta-aminolevulinic acid dehydratase VC0395_A2415 PF01026 TatD related DNase VC0395_A2416 PF00581 Rhodanese-like domain VC0395_A2417 PF01694 Rhomboid family VC0395_A2417 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VC0395_A2418 PF02203 Tar ligand binding domain homologue VC0395_A2418 PF00672 HAMP domain VC0395_A2418 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A2419 PF03748 Flagellar basal body-associated protein FliL VC0395_A2420 PF04345 Chorismate lyase VC0395_A2421 PF01040 UbiA prenyltransferase family VC0395_A2422 PF01553 Acyltransferase VC0395_A2423 PF01726 LexA DNA binding domain VC0395_A2423 PF00717 Peptidase S24-like VC0395_A2425 PF01554 MatE VC0395_A2426 PF03150 Di-haem cytochrome c peroxidase VC0395_A2426 PF00034 Cytochrome c VC0395_A2427 PF00902 Sec-independent protein translocase protein (TatC) VC0395_A2428 PF02416 mttA/Hcf106 family VC0395_A2429 PF02416 mttA/Hcf106 family VC0395_A2430 PF03109 ABC1 family VC0395_A2431 PF02036 SCP-2 sterol transfer family VC0395_A2432 PF01209 ubiE/COQ5 methyltransferase family VC0395_A2433 PF02646 RmuC family VC0395_A2436 PF10625 Universal stress protein B (UspB) VC0395_A2437 PF00210 Ferritin-like domain VC0395_A2438 PF00582 Universal stress protein family VC0395_A2439 PF00892 EamA-like transporter family VC0395_A2441 PF04445 Putative SAM-dependent methyltransferase VC0395_A2442 PF08448 PAS fold VC0395_A2442 PF00563 EAL domain VC0395_A2442 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A2443 PF01037 Lrp/AsnC ligand binding domain VC0395_A2445 PF07690 Major Facilitator Superfamily VC0395_A2446 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A2446 PF03466 LysR substrate binding domain VC0395_A2447 PF01321 Creatinase/Prolidase N-terminal domain VC0395_A2447 PF01321 Creatinase/Prolidase N-terminal domain VC0395_A2447 PF00557 Metallopeptidase family M24 VC0395_A2447 PF00557 Metallopeptidase family M24 VC0395_A2448 PF04055 Radical SAM superfamily VC0395_A2448 PF06968 Biotin and Thiamin Synthesis associated domain VC0395_A2449 PF05690 Thiazole biosynthesis protein ThiG VC0395_A2450 PF00899 ThiF family VC0395_A2451 PF02581 Thiamine monophosphate synthase VC0395_A2452 PF01964 Radical SAM ThiC family VC0395_A2452 PF13667 ThiC-associated domain VC0395_A2453 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VC0395_A2463 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_A2464 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VC0395_A2464 PF01488 Shikimate / quinate 5-dehydrogenase VC0395_A2464 PF08501 Shikimate dehydrogenase substrate binding domain VC0395_A2465 PF01218 Coproporphyrinogen III oxidase VC0395_A2466 PF01300 Telomere recombination VC0395_A2467 PF00731 AIR carboxylase VC0395_A2468 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VC0395_A2468 PF02222 ATP-grasp domain VC0395_A2469 PF01396 Topoisomerase DNA binding C4 zinc finger VC0395_A2470 PF04361 Protein of unknown function (DUF494) VC0395_A2471 PF17782 DprA winged helix domain VC0395_A2471 PF02481 DNA recombination-mediator protein A VC0395_A2472 PF01476 LysM domain VC0395_A2473 PF01327 Polypeptide deformylase VC0395_A2474 PF02911 Formyl transferase, C-terminal domain VC0395_A2474 PF00551 Formyl transferase VC0395_A2475 PF01029 NusB family VC0395_A2475 PF01189 16S rRNA methyltransferase RsmB/F VC0395_A2476 PF02254 TrkA-N domain VC0395_A2476 PF02080 TrkA-C domain VC0395_A2477 PF02386 Cation transport protein VC0395_A2479 PF03006 Haemolysin-III related VC0395_A2480 PF07070 SpoOM protein VC0395_A2482 PF06288 Protein of unknown function (DUF1040) VC0395_A2483 PF13746 4Fe-4S dicluster domain VC0395_A2483 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VC0395_A2483 PF12801 4Fe-4S binding domain VC0395_A2484 PF01636 Phosphotransferase enzyme family VC0395_A2485 PF01323 DSBA-like thioredoxin domain VC0395_A2486 PF01553 Acyltransferase VC0395_A2487 PF01078 Magnesium chelatase, subunit ChlI VC0395_A2487 PF13335 Magnesium chelatase, subunit ChlI C-terminal VC0395_A2488 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VC0395_A2488 PF00205 Thiamine pyrophosphate enzyme, central domain VC0395_A2488 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC0395_A2490 PF01063 Amino-transferase class IV VC0395_A2491 PF00920 Dehydratase family VC0395_A2492 PF00291 Pyridoxal-phosphate dependent enzyme VC0395_A2492 PF00585 C-terminal regulatory domain of Threonine dehydratase VC0395_A2493 PF08240 Alcohol dehydrogenase GroES-like domain VC0395_A2493 PF00107 Zinc-binding dehydrogenase VC0395_A2495 PF01206 Sulfurtransferase TusA VC0395_A2497 PF01169 Uncharacterized protein family UPF0016 VC0395_A2498 PF02091 Glycyl-tRNA synthetase alpha subunit VC0395_A2499 PF02092 Glycyl-tRNA synthetase beta subunit VC0395_A2499 PF05746 DALR anticodon binding domain VC0395_A2500 PF00155 Aminotransferase class I and II VC0395_A2501 PF00011 Hsp20/alpha crystallin family VC0395_A2504 PF00986 DNA gyrase B subunit, carboxyl terminus VC0395_A2504 PF18053 DNA gyrase B subunit insert domain VC0395_A2504 PF01751 Toprim domain VC0395_A2504 PF00204 DNA gyrase B VC0395_A2504 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A2505 PF02463 RecF/RecN/SMC N terminal domain VC0395_A2506 PF00712 DNA polymerase III beta subunit, N-terminal domain VC0395_A2506 PF02768 DNA polymerase III beta subunit, C-terminal domain VC0395_A2506 PF02767 DNA polymerase III beta subunit, central domain VC0395_A2507 PF11638 DnaA N-terminal domain VC0395_A2507 PF08299 Bacterial dnaA protein helix-turn-helix VC0395_A2507 PF00308 Bacterial dnaA protein VC0395_A2509 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC0395_A2510 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A2511 PF00005 ABC transporter VC0395_A2512 PF00468 Ribosomal protein L34 VC0395_A2513 PF00825 Ribonuclease P VC0395_A2514 PF14849 YidC periplasmic domain VC0395_A2514 PF02096 60Kd inner membrane protein VC0395_A2515 PF01926 50S ribosome-binding GTPase VC0395_A2515 PF10396 GTP-binding protein TrmE N-terminus VC0395_A2515 PF12631 MnmE helical domain VC0395_A2516 PF00258 Flavodoxin VC0395_A2517 PF01134 Glucose inhibited division protein A VC0395_A2517 PF13932 GidA associated domain VC0395_A2518 PF02527 rRNA small subunit methyltransferase G VC0395_A2519 PF13614 AAA domain VC0395_A2520 PF02195 ParB-like nuclease domain VC0395_A2520 PF17762 HTH domain found in ParB protein VC0395_A2521 PF03899 ATP synthase I chain VC0395_A2522 PF00119 ATP synthase A chain VC0395_A2523 PF00137 ATP synthase subunit C VC0395_A2524 PF00430 ATP synthase B/B' CF(0) VC0395_A2525 PF00213 ATP synthase delta (OSCP) subunit VC0395_A2526 PF00306 ATP synthase alpha/beta chain, C terminal domain VC0395_A2526 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC0395_A2526 PF02874 ATP synthase alpha/beta family, beta-barrel domain VC0395_A2527 PF00231 ATP synthase VC0395_A2528 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC0395_A2528 PF02874 ATP synthase alpha/beta family, beta-barrel domain VC0395_A2529 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VC0395_A2529 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VC0395_A2530 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_A2530 PF12804 MobA-like NTP transferase domain VC0395_A2531 PF07690 Major Facilitator Superfamily VC0395_A2532 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A2532 PF03466 LysR substrate binding domain VC0395_A2533 PF02803 Thiolase, C-terminal domain VC0395_A2533 PF00108 Thiolase, N-terminal domain VC0395_A2534 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VC0395_A2534 PF00378 Enoyl-CoA hydratase/isomerase VC0395_A2534 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VC0395_A2535 PF09186 Domain of unknown function (DUF1949) VC0395_A2535 PF01205 Uncharacterized protein family UPF0029 VC0395_A2536 PF02386 Cation transport protein VC0395_A2537 PF12724 Flavodoxin domain VC0395_A2549 PF03466 LysR substrate binding domain VC0395_A2549 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC0395_A2550 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VC0395_A2550 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VC0395_A2551 PF04380 Membrane fusogenic activity VC0395_A2552 PF00873 AcrB/AcrD/AcrF family VC0395_A2553 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VC0395_A2554 PF00440 Bacterial regulatory proteins, tetR family VC0395_A2555 PF13361 UvrD-like helicase C-terminal domain VC0395_A2555 PF00580 UvrD/REP helicase N-terminal domain VC0395_A2556 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VC0395_A2563 PF00005 ABC transporter VC0395_A2563 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC0395_A2564 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC0395_A2566 PF00528 Binding-protein-dependent transport system inner membrane component VC0395_A2566 PF12911 N-terminal TM domain of oligopeptide transport permease C VC0395_A2568 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC0395_A2568 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC0395_A2569 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VC0395_A2570 PF01432 Peptidase family M3 VC0395_A2571 PF00580 UvrD/REP helicase N-terminal domain VC0395_A2571 PF13361 UvrD-like helicase C-terminal domain VC0395_A2572 PF01810 LysE type translocator VC0395_A2573 PF12833 Helix-turn-helix domain VC0395_A2575 PF00892 EamA-like transporter family VC0395_A2576 PF09382 RQC domain VC0395_A2576 PF16124 RecQ zinc-binding VC0395_A2576 PF00570 HRDC domain VC0395_A2576 PF00271 Helicase conserved C-terminal domain VC0395_A2576 PF00270 DEAD/DEAH box helicase VC0395_A2579 PF00664 ABC transporter transmembrane region VC0395_A2579 PF00005 ABC transporter VC0395_A2580 PF00593 TonB dependent receptor VC0395_A2580 PF07715 TonB-dependent Receptor Plug Domain VC0395_A2581 PF00005 ABC transporter VC0395_A2582 PF01497 Periplasmic binding protein VC0395_A2583 PF01032 FecCD transport family VC0395_A2584 PF01380 SIS domain VC0395_A2584 PF01418 Helix-turn-helix domain, rpiR family VC0395_A2585 PF13580 SIS domain VC0395_A2586 PF00367 phosphotransferase system, EIIB VC0395_A2586 PF02378 Phosphotransferase system, EIIC VC0395_A2587 PF03350 Uncharacterized protein family, UPF0114 VC0395_A2588 PF08340 Domain of unknown function (DUF1732) VC0395_A2588 PF03755 YicC-like family, N-terminal region VC0395_A2589 PF03725 3' exoribonuclease family, domain 2 VC0395_A2589 PF01138 3' exoribonuclease family, domain 1 VC0395_A2590 PF00156 Phosphoribosyl transferase domain VC0395_A2591 PF03279 Bacterial lipid A biosynthesis acyltransferase VC0395_A2592 PF03279 Bacterial lipid A biosynthesis acyltransferase VC0395_A2593 PF00440 Bacterial regulatory proteins, tetR family VC0395_A2595 PF04127 DNA / pantothenate metabolism flavoprotein VC0395_A2595 PF02441 Flavoprotein VC0395_A2596 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A2596 PF00672 HAMP domain VC0395_A2596 PF02743 Cache domain VC0395_A2597 PF04002 RadC-like JAB domain VC0395_A2599 PF00830 Ribosomal L28 family VC0395_A2600 PF00471 Ribosomal protein L33 VC0395_A2602 PF06827 Zinc finger found in FPG and IleRS VC0395_A2602 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VC0395_A2602 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VC0395_A2603 PF01467 Cytidylyltransferase-like VC0395_A2604 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VC0395_A2605 PF00535 Glycosyl transferase family 2 VC0395_A2606 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VC0395_A2613 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VC0395_A2614 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VC0395_A2616 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VC0395_A2619 PF00457 Glycosyl hydrolases family 11 VC0395_A2619 PF01522 Polysaccharide deacetylase VC0395_A2620 PF01370 NAD dependent epimerase/dehydratase family VC0395_A2621 PF01050 Mannose-6-phosphate isomerase VC0395_A2621 PF00483 Nucleotidyl transferase VC0395_A2622 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC0395_A2622 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VC0395_A2622 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC0395_A2622 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC0395_A2623 PF16363 GDP-mannose 4,6 dehydratase VC0395_A2624 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VC0395_A2627 PF00005 ABC transporter VC0395_A2627 PF14524 Wzt C-terminal domain VC0395_A2629 PF13193 AMP-binding enzyme C-terminal domain VC0395_A2629 PF00501 AMP-binding enzyme VC0395_A2630 PF00171 Aldehyde dehydrogenase family VC0395_A2630 PF00465 Iron-containing alcohol dehydrogenase VC0395_A2632 PF00132 Bacterial transferase hexapeptide (six repeats) VC0395_A2634 PF13808 DDE_Tnp_1-associated VC0395_A2634 PF01609 Transposase DDE domain VC0395_A2635 PF13808 DDE_Tnp_1-associated VC0395_A2635 PF01609 Transposase DDE domain VC0395_A2638 PF02719 Polysaccharide biosynthesis protein VC0395_A2639 PF01370 NAD dependent epimerase/dehydratase family VC0395_A2640 PF02397 Bacterial sugar transferase VC0395_A2642 PF10996 Beta-Casp domain VC0395_A2642 PF00753 Metallo-beta-lactamase superfamily VC0395_A2642 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VC0395_A2643 PF00924 Mechanosensitive ion channel VC0395_A2644 PF03167 Uracil DNA glycosylase superfamily VC0395_A2645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC0395_A2646 PF04222 Protein of unknown function (DUF416) VC0395_A2647 PF01238 Phosphomannose isomerase type I VC0395_A2648 PF00480 ROK family VC0395_A2649 PF01595 Cyclin M transmembrane N-terminal domain VC0395_A2649 PF00571 CBS domain VC0395_A2650 PF00216 Bacterial DNA-binding protein VC0395_A2652 PF02844 Phosphoribosylglycinamide synthetase, N domain VC0395_A2652 PF02843 Phosphoribosylglycinamide synthetase, C domain VC0395_A2652 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VC0395_A2653 PF02142 MGS-like domain VC0395_A2653 PF01808 AICARFT/IMPCHase bienzyme VC0395_A2655 PF13411 MerR HTH family regulatory protein VC0395_A2656 PF18500 CadC C-terminal domain 1 VC0395_A2656 PF00486 Transcriptional regulatory protein, C terminal VC0395_A2657 PF13520 Amino acid permease VC0395_A2658 PF01276 Orn/Lys/Arg decarboxylase, major domain VC0395_A2658 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VC0395_A2658 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VC0395_A2659 PF00672 HAMP domain VC0395_A2659 PF17200 Single Cache domain 2 VC0395_A2659 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A2662 PF07715 TonB-dependent Receptor Plug Domain VC0395_A2662 PF00593 TonB dependent receptor VC0395_A2663 PF01081 KDPG and KHG aldolase VC0395_A2664 PF02447 GntP family permease VC0395_A2665 PF01202 Shikimate kinase VC0395_A2666 PF00920 Dehydratase family VC0395_A2667 PF00356 Bacterial regulatory proteins, lacI family VC0395_A2667 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VC0395_A2669 PF02661 Fic/DOC family VC0395_A2669 PF13784 Fic/DOC family N-terminal VC0395_A2670 PF18395 Cas3 C-terminal domain VC0395_A2670 PF18019 HD domain VC0395_A2674 PF09344 CT1975-like protein VC0395_A2676 PF01867 CRISPR associated protein Cas1 VC0395_A2685 PF02954 Bacterial regulatory protein, Fis family VC0395_A2686 PF01207 Dihydrouridine synthase (Dus) VC0395_A2688 PF02785 Biotin carboxylase C-terminal domain VC0395_A2688 PF00289 Biotin carboxylase, N-terminal domain VC0395_A2688 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VC0395_A2689 PF00364 Biotin-requiring enzyme VC0395_A2690 PF01220 Dehydroquinase class II VC0395_A2691 PF16177 Acetyl-coenzyme A synthetase N-terminus VC0395_A2691 PF13193 AMP-binding enzyme C-terminal domain VC0395_A2691 PF00501 AMP-binding enzyme VC0395_A2694 PF12832 MFS_1 like family VC0395_A2695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC0395_A2695 PF00512 His Kinase A (phospho-acceptor) domain VC0395_A2695 PF00072 Response regulator receiver domain VC0395_A2695 PF09456 RcsC Alpha-Beta-Loop (ABL) VC0395_A2696 PF02541 Ppx/GppA phosphatase family VC0395_A2697 PF00270 DEAD/DEAH box helicase VC0395_A2697 PF00271 Helicase conserved C-terminal domain VC0395_A2698 PF00085 Thioredoxin VC0395_A2699 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC0395_A2699 PF07498 Rho termination factor, N-terminal domain VC0395_A2699 PF07497 Rho termination factor, RNA-binding domain VC0395_A2702 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VC0395_A2703 PF00970 Oxidoreductase FAD-binding domain VC0395_A2703 PF00111 2Fe-2S iron-sulfur cluster binding domain VC0395_A2703 PF00175 Oxidoreductase NAD-binding domain VC0395_A2704 PF00175 Oxidoreductase NAD-binding domain VC0395_A2714 PF13091 PLD-like domain VC0395_A2716 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VC0395_A2716 PF01565 FAD binding domain VC0395_A2717 PF08279 HTH domain VC0395_A2717 PF03099 Biotin/lipoate A/B protein ligase family VC0395_A2717 PF02237 Biotin protein ligase C terminal domain VC0395_A2718 PF00485 Phosphoribulokinase / Uridine kinase family VC0395_A2723 PF03143 Elongation factor Tu C-terminal domain VC0395_A2723 PF03144 Elongation factor Tu domain 2 VC0395_A2723 PF00009 Elongation factor Tu GTP binding domain VC0395_A2724 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VC0395_A2725 PF00467 KOW motif VC0395_A2725 PF02357 Transcription termination factor nusG VC0395_A2726 PF03946 Ribosomal protein L11, N-terminal domain VC0395_A2726 PF00298 Ribosomal protein L11, RNA binding domain VC0395_A2727 PF00687 Ribosomal protein L1p/L10e family VC0395_A2728 PF00466 Ribosomal protein L10 VC0395_A2729 PF00542 Ribosomal protein L7/L12 C-terminal domain VC0395_A2729 PF16320 Ribosomal protein L7/L12 dimerisation domain VC0395_A2730 PF04563 RNA polymerase beta subunit VC0395_A2730 PF04561 RNA polymerase Rpb2, domain 2 VC0395_A2730 PF04565 RNA polymerase Rpb2, domain 3 VC0395_A2730 PF10385 RNA polymerase beta subunit external 1 domain VC0395_A2730 PF00562 RNA polymerase Rpb2, domain 6 VC0395_A2730 PF04560 RNA polymerase Rpb2, domain 7 VC0395_A2731 PF04997 RNA polymerase Rpb1, domain 1 VC0395_A2731 PF04998 RNA polymerase Rpb1, domain 5 VC0395_A2731 PF05000 RNA polymerase Rpb1, domain 4 VC0395_A2731 PF04983 RNA polymerase Rpb1, domain 3 VC0395_A2731 PF00623 RNA polymerase Rpb1, domain 2 VC0395_A2732 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VC0395_A2733 PF00293 NUDIX domain VC0395_A2733 PF09297 NADH pyrophosphatase zinc ribbon domain VC0395_A2734 PF01208 Uroporphyrinogen decarboxylase (URO-D) VC0395_A2735 PF08360 QacR-like protein, C-terminal region VC0395_A2735 PF00440 Bacterial regulatory proteins, tetR family VC0395_A2736 PF01551 Peptidase family M23 VC0395_A2738 PF01676 Metalloenzyme superfamily VC0395_A2738 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VC0395_A2740 PF02080 TrkA-C domain VC0395_A2740 PF03600 Citrate transporter VC0395_A2741 PF02666 Phosphatidylserine decarboxylase VC0395_A2742 PF03193 RsgA GTPase VC0395_A2743 PF00929 Exonuclease VC0395_A2753 PF08331 Domain of unknown function (DUF1730) VC0395_A2754 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VC0395_A2755 PF01520 N-acetylmuramoyl-L-alanine amidase VC0395_A2756 PF01119 DNA mismatch repair protein, C-terminal domain VC0395_A2756 PF08676 MutL C terminal dimerisation domain VC0395_A2758 PF17209 Hfq protein VC0395_A2759 PF01926 50S ribosome-binding GTPase VC0395_A2759 PF13167 GTP-binding GTPase N-terminal VC0395_A2759 PF16360 GTP-binding GTPase Middle Region VC0395_A2760 PF12221 Bacterial membrane protein N terminal VC0395_A2760 PF01145 SPFH domain / Band 7 family VC0395_A2761 PF01145 SPFH domain / Band 7 family VC0395_A2762 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VC0395_A2763 PF04102 SlyX VC0395_A2766 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VC0395_A2766 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC0395_A2767 PF13309 HTH domain VC0395_A2767 PF08348 YheO-like PAS domain VC0395_A2768 PF02635 DsrE/DsrF-like family VC0395_A2769 PF02635 DsrE/DsrF-like family VC0395_A2771 PF00164 Ribosomal protein S12/S23 VC0395_A2772 PF00177 Ribosomal protein S7p/S5e VC0395_A2773 PF03144 Elongation factor Tu domain 2 VC0395_A2773 PF00009 Elongation factor Tu GTP binding domain VC0395_A2773 PF03764 Elongation factor G, domain IV VC0395_A2773 PF14492 Elongation Factor G, domain II VC0395_A2773 PF00679 Elongation factor G C-terminus VC0395_A2774 PF00009 Elongation factor Tu GTP binding domain VC0395_A2774 PF03144 Elongation factor Tu domain 2 VC0395_A2774 PF03143 Elongation factor Tu C-terminal domain VC0395_A2775 PF04324 BFD-like [2Fe-2S] binding domain VC0395_A2776 PF00210 Ferritin-like domain VC0395_A2777 PF01250 Ribosomal protein S6 VC0395_A2778 PF00436 Single-strand binding protein family VC0395_A2779 PF01084 Ribosomal protein S18 VC0395_A2780 PF03948 Ribosomal protein L9, C-terminal domain VC0395_A2780 PF01281 Ribosomal protein L9, N-terminal domain VC0395_A2782 PF00772 DnaB-like helicase N terminal domain VC0395_A2782 PF03796 DnaB-like helicase C terminal domain VC0395_A2783 PF00842 Alanine racemase, C-terminal domain VC0395_A2783 PF01168 Alanine racemase, N-terminal domain VC0395_A2784 PF01894 Uncharacterised protein family UPF0047 VC0395_A2785 PF00342 Phosphoglucose isomerase VC0395_A2786 PF12706 Beta-lactamase superfamily domain VC0395_A2788 PF01475 Ferric uptake regulator family VC0395_A2790 PF01207 Dihydrouridine synthase (Dus) VC0395_A2791 PF09583 Phage shock protein G (Phageshock_PspG) VC0395_A2795 PF00667 FAD binding domain VC0395_A2795 PF00258 Flavodoxin VC0395_A2795 PF00175 Oxidoreductase NAD-binding domain VC0395_A2796 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VC0395_A2796 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VC0395_A2797 PF01507 Phosphoadenosine phosphosulfate reductase family VC0395_A2807 PF00999 Sodium/hydrogen exchanger family VC0395_A2808 PF02607 B12 binding domain VC0395_A2808 PF02965 Vitamin B12 dependent methionine synthase, activation domain VC0395_A2808 PF00809 Pterin binding enzyme VC0395_A2808 PF02574 Homocysteine S-methyltransferase VC0395_A2808 PF02310 B12 binding domain VC0395_A2809 PF01842 ACT domain VC0395_A2809 PF00696 Amino acid kinase family VC0395_A2810 PF00266 Aminotransferase class-V VC0395_A2812 PF17760 UvrA interaction domain VC0395_A2812 PF17755 UvrA DNA-binding domain VC0395_A2812 PF00005 ABC transporter VC0395_A2813 PF00483 Nucleotidyl transferase VC0395_A2814 PF00196 Bacterial regulatory proteins, luxR family VC0395_A2815 PF00436 Single-strand binding protein family VC0395_A2816 PF00990 Diguanylate cyclase, GGDEF domain VC0395_A2816 PF17157 Gammaproteobacterial periplasmic sensor domain VC0395_A2816 PF00563 EAL domain VC0395_A2820 PF00263 Bacterial type II and III secretion system protein VC0395_A2820 PF07660 Secretin and TonB N terminus short domain VC0395_A2820 PF03958 Bacterial type II/III secretion system short domain VC0395_A2820 PF11741 AMIN domain VC0395_A2821 PF01471 Putative peptidoglycan binding domain VC0395_A2821 PF13401 AAA domain VC0395_A2823 PF00437 Type II/IV secretion system protein VC0395_A2824 PF00482 Type II secretion system (T2SS), protein F VC0395_A2826 PF00114 Pilin (bacterial filament) VC0395_A2826 PF07963 Prokaryotic N-terminal methylation motif VC0395_A2827 PF00114 Pilin (bacterial filament) VC0395_A2827 PF07963 Prokaryotic N-terminal methylation motif VC0395_A2835 PF04085 rod shape-determining protein MreC VC0395_A2836 PF04093 rod shape-determining protein MreD VC0395_A2837 PF02545 Maf-like protein VC0395_A2838 PF00575 S1 RNA binding domain VC0395_A2838 PF10150 Ribonuclease E/G family VC0395_A2839 PF13502 AsmA-like C-terminal region VC0395_A2839 PF13116 Protein of unknown function VC0395_A2840 PF00795 Carbon-nitrogen hydrolase VC0395_A2841 PF01523 Putative modulator of DNA gyrase VC0395_A2843 PF06877 Regulator of ribonuclease activity B VC0395_A2846 PF00582 Universal stress protein family VC0395_A2848 PF16868 NMT1-like family VC0395_A2849 PF01316 Arginine repressor, DNA binding domain VC0395_A2849 PF02863 Arginine repressor, C-terminal domain VC0395_A2850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VC0395_A2850 PF00056 lactate/malate dehydrogenase, NAD binding domain VC0395_A2851 PF13520 Amino acid permease VC0395_A2852 PF00348 Polyprenyl synthetase VC0395_A2853 PF00829 Ribosomal prokaryotic L21 protein VC0395_A2854 PF01016 Ribosomal L27 protein VC0395_A2855 PF01018 GTP1/OBG VC0395_A2855 PF01926 50S ribosome-binding GTPase VC0395_A2856 PF06738 Putative threonine/serine exporter VC0395_A2857 PF12821 Threonine/Serine exporter, ThrE VC0395_A2858 PF00186 Dihydrofolate reductase VC0395_A2859 PF00149 Calcineurin-like phosphoesterase VC0395_A2860 PF04379 ApaG domain VC0395_A2861 PF00398 Ribosomal RNA adenine dimethylase VC0395_A2862 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VC0395_A2863 PF09312 SurA N-terminal domain VC0395_A2864 PF03968 OstA-like protein VC0395_A2864 PF04453 LPS transport system D VC0395_A2865 PF00226 DnaJ domain VC0395_A2865 PF05099 Tellurite resistance protein TerB VC0395_A2871 PF12729 Four helix bundle sensory module for signal transduction VC0395_A2871 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC0395_A2871 PF00672 HAMP domain