VC0395_0003 SM00100 Cyclic nucleotide-monophosphate binding domain VC0395_0006 SM00354 helix_turn _helix lactose operon repressor VC0395_0010 SM00382 ATPases associated with a variety of cellular activities VC0395_0020 SM00382 ATPases associated with a variety of cellular activities VC0395_0021 SM00382 ATPases associated with a variety of cellular activities VC0395_0021 SM01086 C-terminal, D2-small domain, of ClpB protein VC0395_0038 SM00052 Putative diguanylate phosphodiesterase VC0395_0039 SM00450 Rhodanese Homology Domain VC0395_0056 SM00422 helix_turn_helix, mercury resistance VC0395_0059 SM00052 Putative diguanylate phosphodiesterase VC0395_0059 SM00267 diguanylate cyclase VC0395_0065 SM00267 diguanylate cyclase VC0395_0066 SM00382 ATPases associated with a variety of cellular activities VC0395_0070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0076 SM00487 DEAD-like helicases superfamily VC0395_0076 SM00490 helicase superfamily c-terminal domain VC0395_0079 SM00257 Lysin motif VC0395_0081 SM00422 helix_turn_helix, mercury resistance VC0395_0085 SM00028 Tetratricopeptide repeats VC0395_0086 SM00267 diguanylate cyclase VC0395_0089 SM00245 tail specific protease VC0395_0099 SM00014 Acid phosphatase homologues VC0395_0103 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0103 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0106 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins VC0395_0106 SM00495 Chitin-binding domain type 3 VC0395_0106 SM00636 VC0395_0106 VC0395_0117 SM00642 Alpha-amylase domain VC0395_0120 SM00421 helix_turn_helix, Lux Regulon VC0395_0122 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0122 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0122 SM01049 VC0395_0122 VC0395_0131 SM00470 ParB-like nuclease domain VC0395_0136 SM01236 VC0395_0136 VC0395_0137 SM00822 VC0395_0137 VC0395_0139 SM00448 cheY-homologous receiver domain VC0395_0139 SM00862 Transcriptional regulatory protein, C terminal VC0395_0140 SM00387 Histidine kinase-like ATPases VC0395_0140 SM00388 His Kinase A (phosphoacceptor) domain VC0395_0142 SM00382 ATPases associated with a variety of cellular activities VC0395_0147 SM00448 cheY-homologous receiver domain VC0395_0148 SM00073 Histidine Phosphotransfer domain VC0395_0148 SM00260 Two component signalling adaptor domain VC0395_0148 SM00387 Histidine kinase-like ATPases VC0395_0148 SM01231 VC0395_0148 VC0395_0149 SM00260 Two component signalling adaptor domain VC0395_0150 SM00260 Two component signalling adaptor domain VC0395_0151 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0151 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0152 SM00138 Methyltransferase, chemotaxis proteins VC0395_0154 SM00448 cheY-homologous receiver domain VC0395_0155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0157 SM00331 Sigma factor PP2C-like phosphatases VC0395_0157 SM00448 cheY-homologous receiver domain VC0395_0159 SM00382 ATPases associated with a variety of cellular activities VC0395_0160 SM00052 Putative diguanylate phosphodiesterase VC0395_0160 SM00267 diguanylate cyclase VC0395_0164 SM00421 helix_turn_helix, Lux Regulon VC0395_0168 SM00342 helix_turn_helix, arabinose operon control protein VC0395_0173 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0173 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0174 SM00344 helix_turn_helix ASNC type VC0395_0185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0188 SM00450 Rhodanese Homology Domain VC0395_0192 SM00849 Metallo-beta-lactamase superfamily VC0395_0202 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_0204 SM00382 ATPases associated with a variety of cellular activities VC0395_0207 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0207 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0212 SM00642 Alpha-amylase domain VC0395_0215 SM00671 Sel1-like repeats. VC0395_0218 SM01154 VC0395_0218 VC0395_0222 SM00342 helix_turn_helix, arabinose operon control protein VC0395_0222 SM01009 AlkA N-terminal domain VC0395_0232 SM00347 helix_turn_helix multiple antibiotic resistance protein VC0395_0236 SM00342 helix_turn_helix, arabinose operon control protein VC0395_0242 SM00382 ATPases associated with a variety of cellular activities VC0395_0248 SM00487 DEAD-like helicases superfamily VC0395_0248 SM00490 helicase superfamily c-terminal domain VC0395_0250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0259 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0260 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_0261 SM00382 ATPases associated with a variety of cellular activities VC0395_0265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0273 SM00267 diguanylate cyclase VC0395_0279 SM00267 diguanylate cyclase VC0395_0279 SM01079 VC0395_0279 VC0395_0281 SM00530 Helix-turn-helix XRE-family like proteins VC0395_0283 SM00267 diguanylate cyclase VC0395_0284 SM00347 helix_turn_helix multiple antibiotic resistance protein VC0395_0285 SM00260 Two component signalling adaptor domain VC0395_0285 SM00448 cheY-homologous receiver domain VC0395_0287 SM00421 helix_turn_helix, Lux Regulon VC0395_0289 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. VC0395_0292 SM00382 ATPases associated with a variety of cellular activities VC0395_0299 SM00420 helix_turn_helix, Deoxyribose operon repressor VC0395_0299 SM01134 VC0395_0299 VC0395_0300 SM00091 PAS domain VC0395_0300 SM00267 diguanylate cyclase VC0395_0303 SM00342 helix_turn_helix, arabinose operon control protein VC0395_0306 SM00357 Cold shock protein domain VC0395_0307 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_0312 SM00342 helix_turn_helix, arabinose operon control protein VC0395_0316 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0316 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0322 SM00382 ATPases associated with a variety of cellular activities VC0395_0328 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_0331 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0331 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0337 SM00849 Metallo-beta-lactamase superfamily VC0395_0339 SM01350 VC0395_0339 VC0395_0344 SM00481 DNA polymerase alpha chain like domain VC0395_0350 SM00421 helix_turn_helix, Lux Regulon VC0395_0353 SM00829 Enoylreductase VC0395_0367 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC0395_0372 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VC0395_0372 SM00091 PAS domain VC0395_0372 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0377 SM00642 Alpha-amylase domain VC0395_0382 SM00382 ATPases associated with a variety of cellular activities VC0395_0386 SM00387 Histidine kinase-like ATPases VC0395_0387 SM00448 cheY-homologous receiver domain VC0395_0387 SM00850 LytTr DNA-binding domain VC0395_0389 SM00267 diguanylate cyclase VC0395_0393 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC0395_0398 SM01091 Transporter associated domain VC0395_0399 SM01266 VC0395_0399 VC0395_0415 SM00883 Chaperonin 10 Kd subunit VC0395_0416 SM00924 MgtE intracellular N domain VC0395_0429 SM00357 Cold shock protein domain VC0395_0429 SM00955 VC0395_0429 VC0395_0430 SM00487 DEAD-like helicases superfamily VC0395_0430 SM00490 helicase superfamily c-terminal domain VC0395_0431 SM00020 Trypsin-like serine protease VC0395_0438 SM00857 Resolvase, N terminal domain VC0395_0452 SM00354 helix_turn _helix lactose operon repressor VC0395_0455 SM00387 Histidine kinase-like ATPases VC0395_0455 SM00448 cheY-homologous receiver domain VC0395_0460 SM00833 Cobalamin synthesis protein cobW C-terminal domain VC0395_0463 SM00890 Domain of unknown function VC0395_0464 SM00387 Histidine kinase-like ATPases VC0395_0464 SM00388 His Kinase A (phosphoacceptor) domain VC0395_0465 SM00448 cheY-homologous receiver domain VC0395_0465 SM00862 Transcriptional regulatory protein, C terminal VC0395_0470 SM00052 Putative diguanylate phosphodiesterase VC0395_0473 SM00867 YceI-like domain VC0395_0474 SM00116 Domain in cystathionine beta-synthase and other proteins. VC0395_0481 SM00782 PhnA Zinc-Ribbon VC0395_0489 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_0489 SM00267 diguanylate cyclase VC0395_0493 SM00267 diguanylate cyclase VC0395_0497 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VC0395_0497 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VC0395_0499 SM00387 Histidine kinase-like ATPases VC0395_0499 SM00388 His Kinase A (phosphoacceptor) domain VC0395_0500 SM00448 cheY-homologous receiver domain VC0395_0500 SM00862 Transcriptional regulatory protein, C terminal VC0395_0505 SM00530 Helix-turn-helix XRE-family like proteins VC0395_0517 SM00881 CoA binding domain VC0395_0532 SM00382 ATPases associated with a variety of cellular activities VC0395_0542 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC0395_0542 SM00866 VC0395_0542 VC0395_0544 SM00382 ATPases associated with a variety of cellular activities VC0395_0559 SM00852 Probable molybdopterin binding domain VC0395_0562 SM00450 Rhodanese Homology Domain VC0395_0565 SM00861 Transketolase, pyrimidine binding domain VC0395_0586 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VC0395_0588 SM00450 Rhodanese Homology Domain VC0395_0590 SM00563 Phosphate acyltransferases VC0395_0598 SM00354 helix_turn _helix lactose operon repressor VC0395_0599 SM00640 Glycosyl hydrolases family 32 VC0395_0602 SM00091 PAS domain VC0395_0602 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0606 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0606 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0612 SM00354 helix_turn _helix lactose operon repressor VC0395_0613 SM00421 helix_turn_helix, Lux Regulon VC0395_0613 SM00448 cheY-homologous receiver domain VC0395_0614 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0614 SM00387 Histidine kinase-like ATPases VC0395_0617 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VC0395_0621 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_0622 SM00421 helix_turn_helix, Lux Regulon VC0395_0622 SM00448 cheY-homologous receiver domain VC0395_0623 SM00387 Histidine kinase-like ATPases VC0395_0627 SM00382 ATPases associated with a variety of cellular activities VC0395_0631 SM00822 VC0395_0631 VC0395_0636 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VC0395_0636 SM00267 diguanylate cyclase VC0395_0638 SM00495 Chitin-binding domain type 3 VC0395_0638 SM00636 VC0395_0638 VC0395_0641 SM00448 cheY-homologous receiver domain VC0395_0643 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0643 SM00387 Histidine kinase-like ATPases VC0395_0643 SM00388 His Kinase A (phosphoacceptor) domain VC0395_0648 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0648 SM00387 Histidine kinase-like ATPases VC0395_0648 SM00388 His Kinase A (phosphoacceptor) domain VC0395_0648 SM00448 cheY-homologous receiver domain VC0395_0650 SM00851 MGS-like domain VC0395_0658 SM00387 Histidine kinase-like ATPases VC0395_0659 SM00989 VC0395_0659 VC0395_0663 SM00382 ATPases associated with a variety of cellular activities VC0395_0671 SM00387 Histidine kinase-like ATPases VC0395_0671 SM00388 His Kinase A (phosphoacceptor) domain VC0395_0671 SM00448 cheY-homologous receiver domain VC0395_0700 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_0700 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VC0395_0701 SM00382 ATPases associated with a variety of cellular activities VC0395_0703 SM00327 von Willebrand factor (vWF) type A domain VC0395_0704 SM00382 ATPases associated with a variety of cellular activities VC0395_0709 SM00487 DEAD-like helicases superfamily VC0395_0709 SM00490 helicase superfamily c-terminal domain VC0395_0713 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0713 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0717 SM00796 Allophanate hydrolase subunit 1 VC0395_0718 SM00797 Allophanate hydrolase subunit 2 VC0395_0720 SM00984 UDP binding domain VC0395_0723 SM00382 ATPases associated with a variety of cellular activities VC0395_0726 SM00052 Putative diguanylate phosphodiesterase VC0395_0726 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VC0395_0726 SM00267 diguanylate cyclase VC0395_0728 SM00271 DnaJ molecular chaperone homology domain VC0395_0751 SM01321 VC0395_0751 VC0395_0768 SM00857 Resolvase, N terminal domain VC0395_0877 SM00886 Stress responsive A/B Barrel Domain VC0395_0929 SM00530 Helix-turn-helix XRE-family like proteins VC0395_0942 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VC0395_0950 SM00530 Helix-turn-helix XRE-family like proteins VC0395_0956 SM01321 VC0395_0956 VC0395_0957 SM01057 Eukaryotic-type carbonic anhydrase VC0395_0960 SM00936 Penicillin-binding protein 5, C-terminal domain VC0395_0962 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_0962 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0964 SM00342 helix_turn_helix, arabinose operon control protein VC0395_0966 SM00422 helix_turn_helix, mercury resistance VC0395_0972 SM00387 Histidine kinase-like ATPases VC0395_0972 SM00388 His Kinase A (phosphoacceptor) domain VC0395_0973 SM00448 cheY-homologous receiver domain VC0395_0973 SM00862 Transcriptional regulatory protein, C terminal VC0395_0979 SM00642 Alpha-amylase domain VC0395_0982 SM00420 helix_turn_helix, Deoxyribose operon repressor VC0395_0982 SM01134 VC0395_0982 VC0395_0985 SM01007 Class II Aldolase and Adducin N-terminal domain VC0395_0987 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VC0395_0990 SM00448 cheY-homologous receiver domain VC0395_0990 SM00862 Transcriptional regulatory protein, C terminal VC0395_0991 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_0991 SM00387 Histidine kinase-like ATPases VC0395_0991 SM00388 His Kinase A (phosphoacceptor) domain VC0395_0997 SM00342 helix_turn_helix, arabinose operon control protein VC0395_0998 SM00382 ATPases associated with a variety of cellular activities VC0395_1004 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins VC0395_1007 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_1007 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_1008 SM00458 Ricin-type beta-trefoil VC0395_1013 SM00267 diguanylate cyclase VC0395_1018 SM00387 Histidine kinase-like ATPases VC0395_1019 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_1024 SM00487 DEAD-like helicases superfamily VC0395_1024 SM00490 helicase superfamily c-terminal domain VC0395_1025 SM01321 VC0395_1025 VC0395_1058 SM01040 BRO family, N-terminal domain VC0395_1064 SM00530 Helix-turn-helix XRE-family like proteins VC0395_1080 SM01240 VC0395_1080 VC0395_1087 SM00448 cheY-homologous receiver domain VC0395_1092 SM00357 Cold shock protein domain VC0395_1095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VC0395_1095 SM00382 ATPases associated with a variety of cellular activities VC0395_1102 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_1102 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_1106 SM00327 von Willebrand factor (vWF) type A domain VC0395_1107 SM00028 Tetratricopeptide repeats VC0395_1111 SM00357 Cold shock protein domain VC0395_1112 SM00267 diguanylate cyclase VC0395_1135 SM00382 ATPases associated with a variety of cellular activities VC0395_1135 SM00448 cheY-homologous receiver domain VC0395_1136 SM00091 PAS domain VC0395_1136 SM00387 Histidine kinase-like ATPases VC0395_1136 SM00388 His Kinase A (phosphoacceptor) domain VC0395_1137 SM00495 Chitin-binding domain type 3 VC0395_A0003 SM00478 endonuclease III VC0395_A0003 SM00525 VC0395_A0003 VC0395_A0007 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A0010 SM01152 VC0395_A0010 VC0395_A0014 SM00382 ATPases associated with a variety of cellular activities VC0395_A0016 SM00421 helix_turn_helix, Lux Regulon VC0395_A0017 SM00363 S4 RNA-binding domain VC0395_A0018 SM00732 Likely ribonuclease with RNase H fold. VC0395_A0023 SM00731 SprT homologues. VC0395_A0026 SM00861 Transketolase, pyrimidine binding domain VC0395_A0029 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC0395_A0038 SM00420 helix_turn_helix, Deoxyribose operon repressor VC0395_A0038 SM01134 VC0395_A0038 VC0395_A0042 SM00563 Phosphate acyltransferases VC0395_A0045 SM00400 zinc finger VC0395_A0045 SM00493 VC0395_A0045 VC0395_A0045 SM00766 DNA primase DnaG DnaB-binding VC0395_A0051 SM01207 VC0395_A0051 VC0395_A0052 SM00905 Dihydroneopterin aldolase VC0395_A0061 SM00257 Lysin motif VC0395_A0063 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VC0395_A0063 SM00534 ATPase domain of DNA mismatch repair MUTS family VC0395_A0068 SM00382 ATPases associated with a variety of cellular activities VC0395_A0070 SM00382 ATPases associated with a variety of cellular activities VC0395_A0072 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VC0395_A0087 SM00829 Enoylreductase VC0395_A0092 SM01091 Transporter associated domain VC0395_A0094 SM00382 ATPases associated with a variety of cellular activities VC0395_A0094 SM00962 SRP54-type protein, GTPase domain VC0395_A0094 SM00963 SRP54-type protein, helical bundle domain VC0395_A0099 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VC0395_A0100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VC0395_A0110 SM00749 bacterial OsmY and nodulation domain VC0395_A0118 SM00947 Carbonic anhydrase VC0395_A0120 SM00382 ATPases associated with a variety of cellular activities VC0395_A0130 SM00487 DEAD-like helicases superfamily VC0395_A0130 SM00490 helicase superfamily c-terminal domain VC0395_A0130 SM00847 Helicase associated domain (HA2) Add an annotation VC0395_A0135 SM00938 Nitrogen regulatory protein P-II VC0395_A0139 SM00382 ATPases associated with a variety of cellular activities VC0395_A0141 SM01068 Putative carbohydrate binding domain VC0395_A0145 SM00382 ATPases associated with a variety of cellular activities VC0395_A0146 SM00382 ATPases associated with a variety of cellular activities VC0395_A0150 SM00091 PAS domain VC0395_A0150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0150 SM00387 Histidine kinase-like ATPases VC0395_A0150 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A0150 SM00448 cheY-homologous receiver domain VC0395_A0160 SM00363 S4 RNA-binding domain VC0395_A0164 SM01103 VC0395_A0164 VC0395_A0166 SM00382 ATPases associated with a variety of cellular activities VC0395_A0173 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A0173 SM00322 K homology RNA-binding domain VC0395_A0177 SM01387 VC0395_A0177 VC0395_A0178 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A0178 SM00322 K homology RNA-binding domain VC0395_A0179 SM00028 Tetratricopeptide repeats VC0395_A0180 SM00347 helix_turn_helix multiple antibiotic resistance protein VC0395_A0184 SM00052 Putative diguanylate phosphodiesterase VC0395_A0184 SM00091 PAS domain VC0395_A0184 SM00267 diguanylate cyclase VC0395_A0188 SM00052 Putative diguanylate phosphodiesterase VC0395_A0188 SM00267 diguanylate cyclase VC0395_A0191 SM00487 DEAD-like helicases superfamily VC0395_A0191 SM00490 helicase superfamily c-terminal domain VC0395_A0194 SM00937 VC0395_A0194 VC0395_A0196 SM00382 ATPases associated with a variety of cellular activities VC0395_A0200 SM00927 DNA mismatch repair enzyme MutH VC0395_A0204 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VC0395_A0210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VC0395_A0213 SM00904 Riboflavin kinase VC0395_A0224 SM00448 cheY-homologous receiver domain VC0395_A0224 SM00850 LytTr DNA-binding domain VC0395_A0227 SM00830 Chorismate mutase type II VC0395_A0229 SM00382 ATPases associated with a variety of cellular activities VC0395_A0233 SM00052 Putative diguanylate phosphodiesterase VC0395_A0233 SM00267 diguanylate cyclase VC0395_A0235 SM00830 Chorismate mutase type II VC0395_A0238 SM00363 S4 RNA-binding domain VC0395_A0240 SM00382 ATPases associated with a variety of cellular activities VC0395_A0240 SM01086 C-terminal, D2-small domain, of ClpB protein VC0395_A0253 SM00448 cheY-homologous receiver domain VC0395_A0253 SM00862 Transcriptional regulatory protein, C terminal VC0395_A0254 SM00091 PAS domain VC0395_A0254 SM00387 Histidine kinase-like ATPases VC0395_A0254 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A0260 SM00382 ATPases associated with a variety of cellular activities VC0395_A0268 SM00116 Domain in cystathionine beta-synthase and other proteins. VC0395_A0271 SM01323 VC0395_A0271 VC0395_A0280 SM00271 DnaJ molecular chaperone homology domain VC0395_A0285 SM00562 VC0395_A0285 VC0395_A0287 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A0291 SM00564 beta-propeller repeat VC0395_A0292 SM00382 ATPases associated with a variety of cellular activities VC0395_A0296 SM00116 Domain in cystathionine beta-synthase and other proteins. VC0395_A0296 SM01240 VC0395_A0296 VC0395_A0298 SM00495 Chitin-binding domain type 3 VC0395_A0308 SM00382 ATPases associated with a variety of cellular activities VC0395_A0311 SM00849 Metallo-beta-lactamase superfamily VC0395_A0317 SM00448 cheY-homologous receiver domain VC0395_A0318 SM00091 PAS domain VC0395_A0318 SM00387 Histidine kinase-like ATPases VC0395_A0323 SM00764 Citrate lyase ligase C-terminal domain VC0395_A0337 SM00487 DEAD-like helicases superfamily VC0395_A0337 SM00490 helicase superfamily c-terminal domain VC0395_A0339 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A0345 SM00060 Fibronectin type 3 domain VC0395_A0346 SM00247 Beta/gamma crystallins VC0395_A0347 SM00247 Beta/gamma crystallins VC0395_A0350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A0351 SM00862 Transcriptional regulatory protein, C terminal VC0395_A0363 SM00342 helix_turn_helix, arabinose operon control protein VC0395_A0365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A0365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0370 SM01276 VC0395_A0370 VC0395_A0383 SM00271 DnaJ molecular chaperone homology domain VC0395_A0392 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_A0395 SM01211 VC0395_A0395 VC0395_A0396 SM01321 VC0395_A0396 VC0395_A0412 SM00861 Transketolase, pyrimidine binding domain VC0395_A0417 SM00981 VC0395_A0417 VC0395_A0420 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VC0395_A0420 SM00475 5'-3' exonuclease VC0395_A0422 SM00267 diguanylate cyclase VC0395_A0423 SM00028 Tetratricopeptide repeats VC0395_A0429 SM00382 ATPases associated with a variety of cellular activities VC0395_A0429 SM00930 VC0395_A0429 VC0395_A0431 SM00354 helix_turn _helix lactose operon repressor VC0395_A0433 SM00642 Alpha-amylase domain VC0395_A0440 SM00226 Low molecular weight phosphatase family VC0395_A0442 SM00984 UDP binding domain VC0395_A0454 SM00710 Parallel beta-helix repeats VC0395_A0467 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A0470 SM00936 Penicillin-binding protein 5, C-terminal domain VC0395_A0481 SM00116 Domain in cystathionine beta-synthase and other proteins. VC0395_A0481 SM01091 Transporter associated domain VC0395_A0484 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A0491 SM00771 ZipA, C-terminal domain (FtsZ-binding) VC0395_A0492 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VC0395_A0492 SM00292 breast cancer carboxy-terminal domain VC0395_A0492 SM00532 Ligase N family VC0395_A0495 SM00422 helix_turn_helix, mercury resistance VC0395_A0497 SM00244 prohibitin homologues VC0395_A0505 SM00862 Transcriptional regulatory protein, C terminal VC0395_A0506 SM00387 Histidine kinase-like ATPases VC0395_A0511 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VC0395_A0511 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VC0395_A0527 SM00479 VC0395_A0527 VC0395_A0532 SM00478 endonuclease III VC0395_A0532 SM00525 VC0395_A0532 VC0395_A0534 SM00900 VC0395_A0534 VC0395_A0540 SM00487 DEAD-like helicases superfamily VC0395_A0540 SM00490 helicase superfamily c-terminal domain VC0395_A0541 SM00382 ATPases associated with a variety of cellular activities VC0395_A0541 SM00448 cheY-homologous receiver domain VC0395_A0544 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A0545 SM00852 Probable molybdopterin binding domain VC0395_A0549 SM00267 diguanylate cyclase VC0395_A0550 SM00116 Domain in cystathionine beta-synthase and other proteins. VC0395_A0559 SM00226 Low molecular weight phosphatase family VC0395_A0568 SM00448 cheY-homologous receiver domain VC0395_A0572 SM00382 ATPases associated with a variety of cellular activities VC0395_A0574 SM00493 VC0395_A0574 VC0395_A0580 SM00344 helix_turn_helix ASNC type VC0395_A0585 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_A0585 SM00267 diguanylate cyclase VC0395_A0586 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VC0395_A0587 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC0395_A0592 SM00495 Chitin-binding domain type 3 VC0395_A0592 SM00636 VC0395_A0592 VC0395_A0595 SM00342 helix_turn_helix, arabinose operon control protein VC0395_A0600 SM00448 cheY-homologous receiver domain VC0395_A0601 SM00448 cheY-homologous receiver domain VC0395_A0603 SM00387 Histidine kinase-like ATPases VC0395_A0603 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A0604 SM00387 Histidine kinase-like ATPases VC0395_A0605 SM00052 Putative diguanylate phosphodiesterase VC0395_A0605 SM00448 cheY-homologous receiver domain VC0395_A0606 SM00448 cheY-homologous receiver domain VC0395_A0607 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0607 SM00387 Histidine kinase-like ATPases VC0395_A0612 SM00382 ATPases associated with a variety of cellular activities VC0395_A0613 SM00382 ATPases associated with a variety of cellular activities VC0395_A0621 SM00382 ATPases associated with a variety of cellular activities VC0395_A0622 SM00267 diguanylate cyclase VC0395_A0627 SM00382 ATPases associated with a variety of cellular activities VC0395_A0630 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A0630 SM00876 Biotin and Thiamin Synthesis associated domain VC0395_A0648 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A0700 SM00528 Domain in histone-like proteins of HNS family VC0395_A0712 SM00357 Cold shock protein domain VC0395_A0714 SM00382 ATPases associated with a variety of cellular activities VC0395_A0714 SM01086 C-terminal, D2-small domain, of ClpB protein VC0395_A0725 SM00448 cheY-homologous receiver domain VC0395_A0726 SM00387 Histidine kinase-like ATPases VC0395_A0789 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A0798 SM00481 DNA polymerase alpha chain like domain VC0395_A0800 SM00363 S4 RNA-binding domain VC0395_A0801 SM00382 ATPases associated with a variety of cellular activities VC0395_A0802 SM00382 ATPases associated with a variety of cellular activities VC0395_A0806 SM00267 diguanylate cyclase VC0395_A0809 SM00919 Malic enzyme, NAD binding domain VC0395_A0809 SM01274 VC0395_A0809 VC0395_A0814 SM00271 DnaJ molecular chaperone homology domain VC0395_A0814 SM00671 Sel1-like repeats. VC0395_A0820 SM00020 Trypsin-like serine protease VC0395_A0826 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC0395_A0826 SM00866 VC0395_A0826 VC0395_A0829 SM00841 Elongation factor P, C-terminal VC0395_A0829 SM01185 VC0395_A0829 VC0395_A0831 SM00486 DNA polymerase type-B family VC0395_A0832 SM00052 Putative diguanylate phosphodiesterase VC0395_A0833 SM00421 helix_turn_helix, Lux Regulon VC0395_A0833 SM00448 cheY-homologous receiver domain VC0395_A0834 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VC0395_A0834 SM00465 GIY-YIG type nucleases (URI domain) VC0395_A0841 SM00267 diguanylate cyclase VC0395_A0844 SM00873 B3/4 domain VC0395_A0844 SM00874 tRNA synthetase B5 domain VC0395_A0844 SM00896 Ferredoxin-fold anticodon binding domain VC0395_A0846 SM00411 bacterial (prokaryotic) histone like domain VC0395_A0862 SM00855 Phosphoglycerate mutase family VC0395_A0865 SM00382 ATPases associated with a variety of cellular activities VC0395_A0868 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A0868 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0868 SM01049 VC0395_A0868 VC0395_A0871 SM00852 Probable molybdopterin binding domain VC0395_A0877 SM00434 DNA Topoisomerase IV VC0395_A0878 SM00450 Rhodanese Homology Domain VC0395_A0879 SM00342 helix_turn_helix, arabinose operon control protein VC0395_A0890 SM00849 Metallo-beta-lactamase superfamily VC0395_A0895 SM00387 Histidine kinase-like ATPases VC0395_A0895 SM01049 VC0395_A0895 VC0395_A0896 SM00421 helix_turn_helix, Lux Regulon VC0395_A0896 SM00448 cheY-homologous receiver domain VC0395_A0897 SM00347 helix_turn_helix multiple antibiotic resistance protein VC0395_A0899 SM00495 Chitin-binding domain type 3 VC0395_A0905 SM00354 helix_turn _helix lactose operon repressor VC0395_A0908 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A0908 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0909 SM00479 VC0395_A0909 VC0395_A0910 SM00100 Cyclic nucleotide-monophosphate binding domain VC0395_A0910 SM00116 Domain in cystathionine beta-synthase and other proteins. VC0395_A0913 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0913 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_A0916 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A0916 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0926 SM00091 PAS domain VC0395_A0926 SM00382 ATPases associated with a variety of cellular activities VC0395_A0930 SM01005 Alanine racemase, C-terminal domain VC0395_A0931 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A0931 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0933 SM00387 Histidine kinase-like ATPases VC0395_A0934 SM00448 cheY-homologous receiver domain VC0395_A0937 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A0937 SM00387 Histidine kinase-like ATPases VC0395_A0937 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A0938 SM00448 cheY-homologous receiver domain VC0395_A0938 SM00862 Transcriptional regulatory protein, C terminal VC0395_A0944 SM00382 ATPases associated with a variety of cellular activities VC0395_A0951 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC0395_A0951 SM00895 VC0395_A0951 VC0395_A0963 SM00448 cheY-homologous receiver domain VC0395_A0963 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_A0965 SM00073 Histidine Phosphotransfer domain VC0395_A0965 SM00091 PAS domain VC0395_A0965 SM00387 Histidine kinase-like ATPases VC0395_A0965 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A0965 SM00448 cheY-homologous receiver domain VC0395_A0967 SM00267 diguanylate cyclase VC0395_A0968 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VC0395_A0972 SM00382 ATPases associated with a variety of cellular activities VC0395_A0975 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_A0979 SM00028 Tetratricopeptide repeats VC0395_A0979 SM00267 diguanylate cyclase VC0395_A0983 SM00267 diguanylate cyclase VC0395_A0985 SM00267 diguanylate cyclase VC0395_A0991 SM00267 diguanylate cyclase VC0395_A0991 SM01079 VC0395_A0991 VC0395_A0992 SM00479 VC0395_A0992 VC0395_A0997 SM00382 ATPases associated with a variety of cellular activities VC0395_A0997 SM00487 DEAD-like helicases superfamily VC0395_A0997 SM00490 helicase superfamily c-terminal domain VC0395_A0997 SM00847 Helicase associated domain (HA2) Add an annotation VC0395_A1006 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1007 SM00448 cheY-homologous receiver domain VC0395_A1009 SM00073 Histidine Phosphotransfer domain VC0395_A1009 SM00260 Two component signalling adaptor domain VC0395_A1009 SM00387 Histidine kinase-like ATPases VC0395_A1009 SM01231 VC0395_A1009 VC0395_A1010 SM00448 cheY-homologous receiver domain VC0395_A1011 SM00138 Methyltransferase, chemotaxis proteins VC0395_A1013 SM00448 cheY-homologous receiver domain VC0395_A1014 SM00260 Two component signalling adaptor domain VC0395_A1015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1016 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1016 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A1017 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VC0395_A1017 SM00091 PAS domain VC0395_A1017 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1018 SM00487 DEAD-like helicases superfamily VC0395_A1018 SM00490 helicase superfamily c-terminal domain VC0395_A1023 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1023 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A1039 SM00382 ATPases associated with a variety of cellular activities VC0395_A1045 SM00100 Cyclic nucleotide-monophosphate binding domain VC0395_A1045 SM00419 helix_turn_helix, cAMP Regulatory protein VC0395_A1054 SM00897 FIST N domain VC0395_A1054 SM01204 VC0395_A1054 VC0395_A1055 SM00387 Histidine kinase-like ATPases VC0395_A1055 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A1055 SM00448 cheY-homologous receiver domain VC0395_A1056 SM00382 ATPases associated with a variety of cellular activities VC0395_A1058 SM00382 ATPases associated with a variety of cellular activities VC0395_A1067 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A1070 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A1073 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A1078 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A1083 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A1093 SM00382 ATPases associated with a variety of cellular activities VC0395_A1095 SM00981 VC0395_A1095 VC0395_A1104 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VC0395_A1104 SM00245 tail specific protease VC0395_A1105 SM00945 ProQ/FINO family VC0395_A1107 SM00382 ATPases associated with a variety of cellular activities VC0395_A1111 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A1120 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VC0395_A1127 SM00382 ATPases associated with a variety of cellular activities VC0395_A1128 SM00387 Histidine kinase-like ATPases VC0395_A1128 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A1129 SM00382 ATPases associated with a variety of cellular activities VC0395_A1129 SM00448 cheY-homologous receiver domain VC0395_A1132 SM00382 ATPases associated with a variety of cellular activities VC0395_A1134 SM00852 Probable molybdopterin binding domain VC0395_A1139 SM01144 VC0395_A1139 VC0395_A1141 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1158 SM00382 ATPases associated with a variety of cellular activities VC0395_A1159 SM00420 helix_turn_helix, Deoxyribose operon repressor VC0395_A1159 SM01134 VC0395_A1159 VC0395_A1164 SM00354 helix_turn _helix lactose operon repressor VC0395_A1168 SM00849 Metallo-beta-lactamase superfamily VC0395_A1173 SM00382 ATPases associated with a variety of cellular activities VC0395_A1180 SM01022 VC0395_A1180 VC0395_A1187 SM00248 ankyrin repeats VC0395_A1188 SM01060 VC0395_A1188 VC0395_A1193 SM00822 VC0395_A1193 VC0395_A1194 SM00052 Putative diguanylate phosphodiesterase VC0395_A1195 SM00267 diguanylate cyclase VC0395_A1204 SM00267 diguanylate cyclase VC0395_A1207 SM00260 Two component signalling adaptor domain VC0395_A1207 SM00448 cheY-homologous receiver domain VC0395_A1209 SM00448 cheY-homologous receiver domain VC0395_A1210 SM00387 Histidine kinase-like ATPases VC0395_A1217 SM00028 Tetratricopeptide repeats VC0395_A1217 SM00386 HAT (Half-A-TPR) repeats VC0395_A1220 SM01321 VC0395_A1220 VC0395_A1227 SM00112 Cadherin repeats. VC0395_A1236 SM00382 ATPases associated with a variety of cellular activities VC0395_A1241 SM00363 S4 RNA-binding domain VC0395_A1242 SM00487 DEAD-like helicases superfamily VC0395_A1242 SM00490 helicase superfamily c-terminal domain VC0395_A1244 SM00448 cheY-homologous receiver domain VC0395_A1244 SM00862 Transcriptional regulatory protein, C terminal VC0395_A1245 SM00387 Histidine kinase-like ATPases VC0395_A1247 SM00052 Putative diguanylate phosphodiesterase VC0395_A1249 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1249 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A1254 SM00020 Trypsin-like serine protease VC0395_A1257 SM00448 cheY-homologous receiver domain VC0395_A1258 SM00052 Putative diguanylate phosphodiesterase VC0395_A1258 SM00421 helix_turn_helix, Lux Regulon VC0395_A1258 SM00448 cheY-homologous receiver domain VC0395_A1259 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_A1259 SM00073 Histidine Phosphotransfer domain VC0395_A1259 SM00387 Histidine kinase-like ATPases VC0395_A1259 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A1259 SM00448 cheY-homologous receiver domain VC0395_A1259 SM00918 Ligated ion channel L-glutamate- and glycine-binding site VC0395_A1260 SM00116 Domain in cystathionine beta-synthase and other proteins. VC0395_A1264 SM00382 ATPases associated with a variety of cellular activities VC0395_A1271 SM00382 ATPases associated with a variety of cellular activities VC0395_A1275 SM00155 Phospholipase D. Active site motifs. VC0395_A1284 SM00382 ATPases associated with a variety of cellular activities VC0395_A1288 SM00382 ATPases associated with a variety of cellular activities VC0395_A1289 SM00382 ATPases associated with a variety of cellular activities VC0395_A1292 SM01131 VC0395_A1292 VC0395_A1313 SM00052 Putative diguanylate phosphodiesterase VC0395_A1313 SM00091 PAS domain VC0395_A1314 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A1316 SM00344 helix_turn_helix ASNC type VC0395_A1322 SM00448 cheY-homologous receiver domain VC0395_A1322 SM00862 Transcriptional regulatory protein, C terminal VC0395_A1324 SM00354 helix_turn _helix lactose operon repressor VC0395_A1332 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VC0395_A1332 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VC0395_A1332 SM00493 VC0395_A1332 VC0395_A1338 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A1359 SM00487 DEAD-like helicases superfamily VC0395_A1359 SM00490 helicase superfamily c-terminal domain VC0395_A1363 SM00487 DEAD-like helicases superfamily VC0395_A1374 SM01130 VC0395_A1374 VC0395_A1413 SM00382 ATPases associated with a variety of cellular activities VC0395_A1419 SM00342 helix_turn_helix, arabinose operon control protein VC0395_A1424 SM00387 Histidine kinase-like ATPases VC0395_A1424 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A1424 SM00448 cheY-homologous receiver domain VC0395_A1436 SM00382 ATPases associated with a variety of cellular activities VC0395_A1437 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VC0395_A1439 SM00840 VC0395_A1439 VC0395_A1442 SM00052 Putative diguanylate phosphodiesterase VC0395_A1446 SM00491 VC0395_A1446 VC0395_A1450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A1454 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_A1454 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VC0395_A1455 SM00382 ATPases associated with a variety of cellular activities VC0395_A1459 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1463 SM00763 PrkA AAA domain VC0395_A1469 SM00382 ATPases associated with a variety of cellular activities VC0395_A1470 SM00849 Metallo-beta-lactamase superfamily VC0395_A1473 SM00382 ATPases associated with a variety of cellular activities VC0395_A1476 SM00487 DEAD-like helicases superfamily VC0395_A1476 SM00490 helicase superfamily c-terminal domain VC0395_A1476 SM00982 VC0395_A1476 VC0395_A1476 SM01058 CarD-like/TRCF domain VC0395_A1488 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1488 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A1490 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC0395_A1493 SM00843 VC0395_A1493 VC0395_A1494 SM00344 helix_turn_helix ASNC type VC0395_A1495 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VC0395_A1495 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VC0395_A1501 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VC0395_A1502 SM00028 Tetratricopeptide repeats VC0395_A1504 SM00411 bacterial (prokaryotic) histone like domain VC0395_A1505 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A1507 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VC0395_A1509 SM00411 bacterial (prokaryotic) histone like domain VC0395_A1510 SM00382 ATPases associated with a variety of cellular activities VC0395_A1510 SM00464 Found in ATP-dependent protease La (LON) VC0395_A1511 SM00382 ATPases associated with a variety of cellular activities VC0395_A1511 SM00994 ClpX C4-type zinc finger VC0395_A1511 SM01086 C-terminal, D2-small domain, of ClpB protein VC0395_A1515 SM00387 Histidine kinase-like ATPases VC0395_A1515 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A1516 SM00382 ATPases associated with a variety of cellular activities VC0395_A1516 SM00448 cheY-homologous receiver domain VC0395_A1523 SM00052 Putative diguanylate phosphodiesterase VC0395_A1523 SM00267 diguanylate cyclase VC0395_A1526 SM00563 Phosphate acyltransferases VC0395_A1540 SM00495 Chitin-binding domain type 3 VC0395_A1540 SM00636 VC0395_A1540 VC0395_A1550 SM00978 VC0395_A1550 VC0395_A1552 SM00563 Phosphate acyltransferases VC0395_A1554 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1554 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A1555 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A1558 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VC0395_A1564 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_A1565 SM01144 VC0395_A1565 VC0395_A1566 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_A1569 SM00474 3'-5' exonuclease VC0395_A1575 SM00487 DEAD-like helicases superfamily VC0395_A1575 SM00491 VC0395_A1575 VC0395_A1580 SM00870 VC0395_A1580 VC0395_A1586 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC0395_A1592 SM00260 Two component signalling adaptor domain VC0395_A1592 SM00448 cheY-homologous receiver domain VC0395_A1605 SM00825 Beta-ketoacyl synthase VC0395_A1607 SM00822 VC0395_A1607 VC0395_A1608 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VC0395_A1614 SM00363 S4 RNA-binding domain VC0395_A1615 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A1621 SM00859 Semialdehyde dehydrogenase, NAD binding domain VC0395_A1623 SM00073 Histidine Phosphotransfer domain VC0395_A1630 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VC0395_A1630 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VC0395_A1630 SM00493 VC0395_A1630 VC0395_A1645 SM00382 ATPases associated with a variety of cellular activities VC0395_A1647 SM00260 Two component signalling adaptor domain VC0395_A1648 SM00260 Two component signalling adaptor domain VC0395_A1650 SM00448 cheY-homologous receiver domain VC0395_A1651 SM00073 Histidine Phosphotransfer domain VC0395_A1651 SM00260 Two component signalling adaptor domain VC0395_A1651 SM00387 Histidine kinase-like ATPases VC0395_A1651 SM01231 VC0395_A1651 VC0395_A1653 SM00448 cheY-homologous receiver domain VC0395_A1656 SM00382 ATPases associated with a variety of cellular activities VC0395_A1656 SM00962 SRP54-type protein, GTPase domain VC0395_A1658 SM00855 Phosphoglycerate mutase family VC0395_A1661 SM00836 DALR anticodon binding domain VC0395_A1661 SM01016 Arginyl tRNA synthetase N terminal dom VC0395_A1665 SM00899 VC0395_A1665 VC0395_A1666 SM00342 helix_turn_helix, arabinose operon control protein VC0395_A1668 SM00382 ATPases associated with a variety of cellular activities VC0395_A1670 SM00881 CoA binding domain VC0395_A1673 SM00861 Transketolase, pyrimidine binding domain VC0395_A1691 SM00859 Semialdehyde dehydrogenase, NAD binding domain VC0395_A1693 SM00825 Beta-ketoacyl synthase VC0395_A1701 SM00463 Small MutS-related domain VC0395_A1714 SM00382 ATPases associated with a variety of cellular activities VC0395_A1719 SM00382 ATPases associated with a variety of cellular activities VC0395_A1719 SM00448 cheY-homologous receiver domain VC0395_A1720 SM00091 PAS domain VC0395_A1720 SM00387 Histidine kinase-like ATPases VC0395_A1720 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A1721 SM00382 ATPases associated with a variety of cellular activities VC0395_A1738 SM01130 VC0395_A1738 VC0395_A1741 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A1741 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A1744 SM00028 Tetratricopeptide repeats VC0395_A1756 SM00937 VC0395_A1756 VC0395_A1760 SM01400 VC0395_A1760 VC0395_A1777 SM01321 VC0395_A1777 VC0395_A1784 SM00047 Lysozyme subfamily 2 VC0395_A1793 SM00138 Methyltransferase, chemotaxis proteins VC0395_A1794 SM00260 Two component signalling adaptor domain VC0395_A1794 SM00448 cheY-homologous receiver domain VC0395_A1795 SM00858 VC0395_A1795 VC0395_A1801 SM00823 Phosphopantetheine attachment site VC0395_A1809 SM01081 Putative carbohydrate binding domain VC0395_A1815 SM00463 Small MutS-related domain VC0395_A1816 SM00363 S4 RNA-binding domain VC0395_A1817 SM00267 diguanylate cyclase VC0395_A1825 SM00479 VC0395_A1825 VC0395_A1828 SM00849 Metallo-beta-lactamase superfamily VC0395_A1829 SM00257 Lysin motif VC0395_A1831 SM00938 Nitrogen regulatory protein P-II VC0395_A1834 SM00977 TilS substrate C-terminal domain VC0395_A1836 SM00481 DNA polymerase alpha chain like domain VC0395_A1842 SM00935 Outer membrane protein (OmpH-like) VC0395_A1844 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VC0395_A1853 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_A1864 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VC0395_A1874 SM00267 diguanylate cyclase VC0395_A1882 SM00900 VC0395_A1882 VC0395_A1892 SM00464 Found in ATP-dependent protease La (LON) VC0395_A1899 SM00925 MltA specific insert domain VC0395_A1916 SM00354 helix_turn _helix lactose operon repressor VC0395_A1917 SM01038 Beta galactosidase small chain VC0395_A1921 SM00838 Elongation factor G C-terminus VC0395_A1921 SM00889 Elongation factor G, domain IV VC0395_A1922 SM00382 ATPases associated with a variety of cellular activities VC0395_A1928 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VC0395_A1929 SM01133 VC0395_A1929 VC0395_A1938 SM00986 Uracil DNA glycosylase superfamily VC0395_A1938 SM00987 UreE urease accessory protein, C-terminal domain VC0395_A1939 SM00518 AP endonuclease family 2 VC0395_A1947 SM00448 cheY-homologous receiver domain VC0395_A1947 SM00862 Transcriptional regulatory protein, C terminal VC0395_A1948 SM00073 Histidine Phosphotransfer domain VC0395_A1948 SM00091 PAS domain VC0395_A1948 SM00387 Histidine kinase-like ATPases VC0395_A1948 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A1948 SM00448 cheY-homologous receiver domain VC0395_A1949 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VC0395_A1949 SM00091 PAS domain VC0395_A1949 SM00267 diguanylate cyclase VC0395_A1950 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A1967 SM00851 MGS-like domain VC0395_A1967 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VC0395_A1968 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VC0395_A1972 SM00957 SecA DEAD-like domain VC0395_A1972 SM00958 SecA preprotein cross-linking domain VC0395_A1975 SM00864 Tubulin/FtsZ family, GTPase domain VC0395_A1975 SM00865 Tubulin/FtsZ family, C-terminal domain VC0395_A1976 SM00842 Cell division protein FtsA VC0395_A1991 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC0395_A1991 SM00895 VC0395_A1991 VC0395_A1997 SM00644 VC0395_A1997 VC0395_A2007 SM00434 DNA Topoisomerase IV VC0395_A2008 SM00387 Histidine kinase-like ATPases VC0395_A2008 SM00433 TopoisomeraseII VC0395_A2016 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A2016 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A2018 SM00880 VC0395_A2018 VC0395_A2018 SM01118 VC0395_A2018 VC0395_A2021 SM00287 Bacterial SH3 domain homologues VC0395_A2023 SM00382 ATPases associated with a variety of cellular activities VC0395_A2025 SM01192 VC0395_A2025 VC0395_A2025 SM01193 VC0395_A2025 VC0395_A2029 SM00954 Region found in RelA / SpoT proteins VC0395_A2031 SM00267 diguanylate cyclase VC0395_A2032 SM00073 Histidine Phosphotransfer domain VC0395_A2032 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A2032 SM00387 Histidine kinase-like ATPases VC0395_A2032 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A2032 SM00448 cheY-homologous receiver domain VC0395_A2039 SM00358 Double-stranded RNA binding motif VC0395_A2039 SM00535 Ribonuclease III family VC0395_A2063 SM00014 Acid phosphatase homologues VC0395_A2065 SM00917 LeuA allosteric (dimerisation) domain VC0395_A2066 SM01329 VC0395_A2066 VC0395_A2078 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_A2088 SM00487 DEAD-like helicases superfamily VC0395_A2088 SM00490 helicase superfamily c-terminal domain VC0395_A2090 SM00670 Large family of predicted nucleotide-binding domains VC0395_A2095 SM00563 Phosphate acyltransferases VC0395_A2102 SM00382 ATPases associated with a variety of cellular activities VC0395_A2104 SM00116 Domain in cystathionine beta-synthase and other proteins. VC0395_A2108 SM00382 ATPases associated with a variety of cellular activities VC0395_A2114 SM00924 MgtE intracellular N domain VC0395_A2117 SM00382 ATPases associated with a variety of cellular activities VC0395_A2131 SM00382 ATPases associated with a variety of cellular activities VC0395_A2141 SM00487 DEAD-like helicases superfamily VC0395_A2141 SM00490 helicase superfamily c-terminal domain VC0395_A2146 SM01321 VC0395_A2146 VC0395_A2149 SM00662 RNA polymerases D VC0395_A2150 SM00363 S4 RNA-binding domain VC0395_A2150 SM01390 VC0395_A2150 VC0395_A2163 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VC0395_A2164 SM01374 VC0395_A2164 VC0395_A2168 SM00322 K homology RNA-binding domain VC0395_A2171 SM01382 VC0395_A2171 VC0395_A2171 SM01383 VC0395_A2171 VC0395_A2175 SM01403 VC0395_A2175 VC0395_A2176 SM00967 RNA 2'-O ribose methyltransferase substrate binding VC0395_A2177 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A2177 SM00357 Cold shock protein domain VC0395_A2177 SM00955 VC0395_A2177 VC0395_A2179 SM00671 Sel1-like repeats. VC0395_A2180 SM00788 Adenylosuccinate synthetase VC0395_A2186 SM00382 ATPases associated with a variety of cellular activities VC0395_A2191 SM00100 Cyclic nucleotide-monophosphate binding domain VC0395_A2191 SM00419 helix_turn_helix, cAMP Regulatory protein VC0395_A2192 SM01150 VC0395_A2192 VC0395_A2197 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A2207 SM00965 Secretin and TonB N terminus short domain VC0395_A2220 SM00859 Semialdehyde dehydrogenase, NAD binding domain VC0395_A2225 SM00971 Serine acetyltransferase, N-terminal VC0395_A2228 SM00450 Rhodanese Homology Domain VC0395_A2234 SM00841 Elongation factor P, C-terminal VC0395_A2234 SM01185 VC0395_A2234 VC0395_A2238 SM00883 Chaperonin 10 Kd subunit VC0395_A2247 SM00382 ATPases associated with a variety of cellular activities VC0395_A2247 SM01086 C-terminal, D2-small domain, of ClpB protein VC0395_A2250 SM00354 helix_turn _helix lactose operon repressor VC0395_A2251 SM00487 DEAD-like helicases superfamily VC0395_A2251 SM00490 helicase superfamily c-terminal domain VC0395_A2254 SM00919 Malic enzyme, NAD binding domain VC0395_A2254 SM01274 VC0395_A2254 VC0395_A2264 SM00448 cheY-homologous receiver domain VC0395_A2264 SM00862 Transcriptional regulatory protein, C terminal VC0395_A2265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A2265 SM00387 Histidine kinase-like ATPases VC0395_A2265 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A2269 SM00267 diguanylate cyclase VC0395_A2275 SM00421 helix_turn_helix, Lux Regulon VC0395_A2275 SM00448 cheY-homologous receiver domain VC0395_A2276 SM01091 Transporter associated domain VC0395_A2280 SM00072 Guanylate kinase homologues. VC0395_A2281 SM01409 VC0395_A2281 VC0395_A2282 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC0395_A2282 SM00954 Region found in RelA / SpoT proteins VC0395_A2283 SM00487 DEAD-like helicases superfamily VC0395_A2283 SM00490 helicase superfamily c-terminal domain VC0395_A2285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A2285 SM00387 Histidine kinase-like ATPases VC0395_A2285 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A2286 SM00448 cheY-homologous receiver domain VC0395_A2286 SM00862 Transcriptional regulatory protein, C terminal VC0395_A2288 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A2288 SM00732 Likely ribonuclease with RNase H fold. VC0395_A2305 SM00382 ATPases associated with a variety of cellular activities VC0395_A2308 SM00363 S4 RNA-binding domain VC0395_A2318 SM01230 VC0395_A2318 VC0395_A2320 SM00091 PAS domain VC0395_A2320 SM00387 Histidine kinase-like ATPases VC0395_A2320 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A2321 SM00382 ATPases associated with a variety of cellular activities VC0395_A2321 SM00448 cheY-homologous receiver domain VC0395_A2322 SM00052 Putative diguanylate phosphodiesterase VC0395_A2322 SM00267 diguanylate cyclase VC0395_A2340 SM00360 RNA recognition motif VC0395_A2349 SM00530 Helix-turn-helix XRE-family like proteins VC0395_A2362 SM00857 Resolvase, N terminal domain VC0395_A2373 SM00382 ATPases associated with a variety of cellular activities VC0395_A2374 SM00382 ATPases associated with a variety of cellular activities VC0395_A2374 SM00962 SRP54-type protein, GTPase domain VC0395_A2374 SM00963 SRP54-type protein, helical bundle domain VC0395_A2388 SM01144 VC0395_A2388 VC0395_A2389 SM00052 Putative diguanylate phosphodiesterase VC0395_A2389 SM00267 diguanylate cyclase VC0395_A2389 SM00897 FIST N domain VC0395_A2389 SM01204 VC0395_A2389 VC0395_A2396 SM01219 VC0395_A2396 VC0395_A2402 SM00729 Elongator protein 3, MiaB family, Radical SAM VC0395_A2409 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VC0395_A2409 SM00474 3'-5' exonuclease VC0395_A2409 SM00475 5'-3' exonuclease VC0395_A2409 SM00482 DNA polymerase A domain VC0395_A2413 SM01004 Delta-aminolevulinic acid dehydratase VC0395_A2416 SM00450 Rhodanese Homology Domain VC0395_A2418 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VC0395_A2418 SM00091 PAS domain VC0395_A2418 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A2422 SM00563 Phosphate acyltransferases VC0395_A2442 SM00052 Putative diguanylate phosphodiesterase VC0395_A2442 SM00091 PAS domain VC0395_A2442 SM00267 diguanylate cyclase VC0395_A2443 SM00344 helix_turn_helix ASNC type VC0395_A2448 SM00876 Biotin and Thiamin Synthesis associated domain VC0395_A2467 SM01001 AIR carboxylase VC0395_A2472 SM00257 Lysin motif VC0395_A2486 SM00563 Phosphate acyltransferases VC0395_A2487 SM00382 ATPases associated with a variety of cellular activities VC0395_A2493 SM00829 Enoylreductase VC0395_A2504 SM00387 Histidine kinase-like ATPases VC0395_A2504 SM00433 TopoisomeraseII VC0395_A2506 SM00480 DNA polymerase III beta subunit VC0395_A2507 SM00382 ATPases associated with a variety of cellular activities VC0395_A2507 SM00760 Bacterial dnaA protein helix-turn-helix domain VC0395_A2509 SM00062 Bacterial periplasmic substrate-binding proteins VC0395_A2511 SM00382 ATPases associated with a variety of cellular activities VC0395_A2517 SM01228 VC0395_A2517 VC0395_A2520 SM00470 ParB-like nuclease domain VC0395_A2528 SM00382 ATPases associated with a variety of cellular activities VC0395_A2563 SM00382 ATPases associated with a variety of cellular activities VC0395_A2573 SM00342 helix_turn_helix, arabinose operon control protein VC0395_A2576 SM00341 Helicase and RNase D C-terminal VC0395_A2576 SM00487 DEAD-like helicases superfamily VC0395_A2576 SM00490 helicase superfamily c-terminal domain VC0395_A2576 SM00956 VC0395_A2576 VC0395_A2579 SM00382 ATPases associated with a variety of cellular activities VC0395_A2581 SM00382 ATPases associated with a variety of cellular activities VC0395_A2596 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A2596 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A2596 SM01049 VC0395_A2596 VC0395_A2602 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VC0395_A2602 SM01232 VC0395_A2602 VC0395_A2627 SM00382 ATPases associated with a variety of cellular activities VC0395_A2642 SM00849 Metallo-beta-lactamase superfamily VC0395_A2642 SM01027 Beta-Casp domain VC0395_A2644 SM00986 Uracil DNA glycosylase superfamily VC0395_A2644 SM00987 UreE urease accessory protein, C-terminal domain VC0395_A2650 SM00411 bacterial (prokaryotic) histone like domain VC0395_A2652 SM01209 VC0395_A2652 VC0395_A2652 SM01210 VC0395_A2652 VC0395_A2653 SM00798 AICARFT/IMPCHase bienzyme VC0395_A2653 SM00851 MGS-like domain VC0395_A2655 SM00422 helix_turn_helix, mercury resistance VC0395_A2656 SM00862 Transcriptional regulatory protein, C terminal VC0395_A2659 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A2659 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC0395_A2659 SM01049 VC0395_A2659 VC0395_A2667 SM00354 helix_turn _helix lactose operon repressor VC0395_A2670 SM00487 DEAD-like helicases superfamily VC0395_A2670 SM00490 helicase superfamily c-terminal domain VC0395_A2673 SM01101 VC0395_A2673 VC0395_A2688 SM00878 Biotin carboxylase C-terminal domain VC0395_A2692 SM00479 VC0395_A2692 VC0395_A2695 SM00387 Histidine kinase-like ATPases VC0395_A2695 SM00388 His Kinase A (phosphoacceptor) domain VC0395_A2695 SM00448 cheY-homologous receiver domain VC0395_A2697 SM00487 DEAD-like helicases superfamily VC0395_A2697 SM00490 helicase superfamily c-terminal domain VC0395_A2699 SM00357 Cold shock protein domain VC0395_A2699 SM00382 ATPases associated with a variety of cellular activities VC0395_A2699 SM00959 Rho termination factor, N-terminal domain VC0395_A2714 SM00155 Phospholipase D. Active site motifs. VC0395_A2725 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VC0395_A2725 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VC0395_A2726 SM00649 Ribosomal protein L11/L12 VC0395_A2731 SM00663 RNA polymerase I subunit A N-terminus VC0395_A2743 SM00479 VC0395_A2743 VC0395_A2755 SM00257 Lysin motif VC0395_A2755 SM00646 VC0395_A2755 VC0395_A2756 SM00853 MutL C terminal dimerisation domain VC0395_A2756 SM01340 VC0395_A2756 VC0395_A2760 SM00244 prohibitin homologues VC0395_A2761 SM00244 prohibitin homologues VC0395_A2764 SM00320 WD40 repeats VC0395_A2773 SM00838 Elongation factor G C-terminus VC0395_A2773 SM00889 Elongation factor G, domain IV VC0395_A2782 SM00382 ATPases associated with a variety of cellular activities VC0395_A2783 SM01005 Alanine racemase, C-terminal domain VC0395_A2808 SM01018 B12 binding domain VC0395_A2814 SM00421 helix_turn_helix, Lux Regulon VC0395_A2816 SM00052 Putative diguanylate phosphodiesterase VC0395_A2816 SM00267 diguanylate cyclase VC0395_A2820 SM00965 Secretin and TonB N terminus short domain VC0395_A2822 SM00028 Tetratricopeptide repeats VC0395_A2823 SM00382 ATPases associated with a variety of cellular activities VC0395_A2838 SM00316 Ribosomal protein S1-like RNA-binding domain VC0395_A2861 SM00650 Ribosomal RNA adenine dimethylases VC0395_A2865 SM00271 DnaJ molecular chaperone homology domain VC0395_A2871 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC0395_A2871 SM01049 VC0395_A2871