locus-tag class description GG844_00005 PF07690 Major Facilitator Superfamily GG844_00010 PF03009 Glycerophosphoryl diester phosphodiesterase family GG844_00020 PF01048 Phosphorylase superfamily GG844_00025 PF04973 Nicotinamide mononucleotide transporter GG844_00030 PF00356 Bacterial regulatory proteins, lacI family GG844_00035 PF00294 pfkB family carbohydrate kinase GG844_00040 PF13407 Periplasmic binding protein domain GG844_00045 PF02653 Branched-chain amino acid transport system / permease component GG844_00050 PF00005 ABC transporter GG844_00055 PF05025 RbsD / FucU transport protein family GG844_00070 PF16671 Actin cross-linking domain GG844_00070 PF04717 Type VI secretion system, phage-baseplate injector GG844_00105 PF17871 AAA lid domain GG844_00105 PF07724 AAA domain (Cdc48 subfamily) GG844_00105 PF00004 ATPase family associated with various cellular activities (AAA) GG844_00105 PF10431 C-terminal, D2-small domain, of ClpB protein GG844_00165 PF00849 RNA pseudouridylate synthase GG844_00170 PF01740 STAS domain GG844_00170 PF00916 Sulfate permease family GG844_00175 PF13419 Haloacid dehalogenase-like hydrolase GG844_00180 PF00563 EAL domain GG844_00180 PF00196 Bacterial regulatory proteins, luxR family GG844_00185 PF00581 Rhodanese-like domain GG844_00190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GG844_00190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GG844_00195 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GG844_00195 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GG844_00205 PF01447 Thermolysin metallopeptidase, catalytic domain GG844_00205 PF01483 Proprotein convertase P-domain GG844_00205 PF07504 Fungalysin/Thermolysin Propeptide Motif GG844_00205 PF02868 Thermolysin metallopeptidase, alpha-helical domain GG844_00225 PF02001 Protein of unknown function DUF134 GG844_00235 PF00375 Sodium:dicarboxylate symporter family GG844_00255 PF09278 MerR, DNA binding GG844_00255 PF00376 MerR family regulatory protein GG844_00260 PF07690 Major Facilitator Superfamily GG844_00265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_00265 PF03466 LysR substrate binding domain GG844_00270 PF03707 Bacterial signalling protein N terminal repeat GG844_00270 PF00563 EAL domain GG844_00270 PF13188 PAS domain GG844_00270 PF00990 Diguanylate cyclase, GGDEF domain GG844_00275 PF08525 Opacity-associated protein A N-terminal motif GG844_00275 PF01476 LysM domain GG844_00275 PF01551 Peptidase family M23 GG844_00285 PF00916 Sulfate permease family GG844_00285 PF01740 STAS domain GG844_00300 PF03707 Bacterial signalling protein N terminal repeat GG844_00300 PF00990 Diguanylate cyclase, GGDEF domain GG844_00300 PF00563 EAL domain GG844_00305 PF00005 ABC transporter GG844_00310 PF00528 Binding-protein-dependent transport system inner membrane component GG844_00315 PF00528 Binding-protein-dependent transport system inner membrane component GG844_00320 PF12849 PBP superfamily domain GG844_00325 PF12729 Four helix bundle sensory module for signal transduction GG844_00325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_00325 PF00672 HAMP domain GG844_00345 PF07715 TonB-dependent Receptor Plug Domain GG844_00345 PF00593 TonB dependent receptor GG844_00350 PF00326 Prolyl oligopeptidase family GG844_00350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GG844_00355 PF00270 DEAD/DEAH box helicase GG844_00355 PF00271 Helicase conserved C-terminal domain GG844_00365 PF03734 L,D-transpeptidase catalytic domain GG844_00365 PF01476 LysM domain GG844_00365 PF17969 L,D-transpeptidase C-terminal domain GG844_00370 PF00875 DNA photolyase GG844_00370 PF03441 FAD binding domain of DNA photolyase GG844_00375 PF13411 MerR HTH family regulatory protein GG844_00380 PF08349 Protein of unknown function (DUF1722) GG844_00385 PF01048 Phosphorylase superfamily GG844_00400 PF00990 Diguanylate cyclase, GGDEF domain GG844_00405 PF11742 Protein of unknown function (DUF3302) GG844_00410 PF00529 HlyD membrane-fusion protein of T1SS GG844_00410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GG844_00425 PF07238 PilZ domain GG844_00425 PF12945 Flagellar protein YcgR GG844_00430 PF03616 Sodium/glutamate symporter GG844_00445 PF02630 SCO1/SenC GG844_00455 PF00375 Sodium:dicarboxylate symporter family GG844_00460 PF01569 PAP2 superfamily GG844_00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_00480 PF00672 HAMP domain GG844_00480 PF02743 Cache domain GG844_00500 PF00704 Glycosyl hydrolases family 18 GG844_00500 PF08329 Chitinase A, N-terminal domain GG844_00505 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GG844_00510 PF00939 Sodium:sulfate symporter transmembrane region GG844_00520 PF01757 Acyltransferase family GG844_00520 PF01168 Alanine racemase, N-terminal domain GG844_00520 PF00842 Alanine racemase, C-terminal domain GG844_00545 PF04717 Type VI secretion system, phage-baseplate injector GG844_00545 PF16671 Actin cross-linking domain GG844_00550 PF05638 Type VI secretion system effector, Hcp GG844_00555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GG844_00555 PF00128 Alpha amylase, catalytic domain GG844_00555 PF02806 Alpha amylase, C-terminal all-beta domain GG844_00560 PF02446 4-alpha-glucanotransferase GG844_00565 PF00343 Carbohydrate phosphorylase GG844_00570 PF00196 Bacterial regulatory proteins, luxR family GG844_00570 PF17874 MalT-like TPR region GG844_00575 PF10928 Protein of unknown function (DUF2810) GG844_00585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_00585 PF17200 Single Cache domain 2 GG844_00585 PF00672 HAMP domain GG844_00590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GG844_00590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GG844_00595 PF01709 Transcriptional regulator GG844_00620 PF13614 AAA domain GG844_00620 PF18607 ParA helix turn helix domain GG844_00625 PF02195 ParB-like nuclease domain GG844_00625 PF08775 ParB family GG844_00630 PF13416 Bacterial extracellular solute-binding protein GG844_00635 PF05127 Helicase GG844_00635 PF13718 GNAT acetyltransferase 2 GG844_00645 PF00501 AMP-binding enzyme GG844_00665 PF00486 Transcriptional regulatory protein, C terminal GG844_00665 PF00072 Response regulator receiver domain GG844_00670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_00670 PF00512 His Kinase A (phospho-acceptor) domain GG844_00670 PF08521 Two-component sensor kinase N-terminal GG844_00680 PF00005 ABC transporter GG844_00680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_00685 PF00528 Binding-protein-dependent transport system inner membrane component GG844_00685 PF12911 N-terminal TM domain of oligopeptide transport permease C GG844_00690 PF00528 Binding-protein-dependent transport system inner membrane component GG844_00705 PF00072 Response regulator receiver domain GG844_00710 PF09078 CheY binding GG844_00710 PF02895 Signal transducing histidine kinase, homodimeric domain GG844_00710 PF01584 CheW-like domain GG844_00710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_00710 PF01627 Hpt domain GG844_00715 PF01584 CheW-like domain GG844_00720 PF01584 CheW-like domain GG844_00725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_00725 PF02203 Tar ligand binding domain homologue GG844_00725 PF00672 HAMP domain GG844_00730 PF03705 CheR methyltransferase, all-alpha domain GG844_00730 PF01739 CheR methyltransferase, SAM binding domain GG844_00735 PF03975 CheD chemotactic sensory transduction GG844_00740 PF00072 Response regulator receiver domain GG844_00740 PF01339 CheB methylesterase GG844_00745 PF02743 Cache domain GG844_00745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_00745 PF00672 HAMP domain GG844_00755 PF00486 Transcriptional regulatory protein, C terminal GG844_00755 PF00072 Response regulator receiver domain GG844_00765 PF03412 Peptidase C39 family GG844_00765 PF00664 ABC transporter transmembrane region GG844_00765 PF00005 ABC transporter GG844_00780 PF00529 HlyD membrane-fusion protein of T1SS GG844_00785 PF01243 Pyridoxamine 5'-phosphate oxidase GG844_00785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GG844_00790 PF00072 Response regulator receiver domain GG844_00790 PF00196 Bacterial regulatory proteins, luxR family GG844_00795 PF03781 Sulfatase-modifying factor enzyme 1 GG844_00805 PF12833 Helix-turn-helix domain GG844_00810 PF01619 Proline dehydrogenase GG844_00810 PF14850 DNA-binding domain of Proline dehydrogenase GG844_00810 PF00171 Aldehyde dehydrogenase family GG844_00810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GG844_00820 PF00474 Sodium:solute symporter family GG844_00830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_00830 PF02743 Cache domain GG844_00830 PF00672 HAMP domain GG844_00835 PF01037 Lrp/AsnC ligand binding domain GG844_00840 PF00171 Aldehyde dehydrogenase family GG844_00850 PF01276 Orn/Lys/Arg decarboxylase, major domain GG844_00850 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GG844_00850 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GG844_00855 PF13520 Amino acid permease GG844_00865 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GG844_00870 PF04013 Putative SAM-dependent RNA methyltransferase GG844_00875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_00875 PF03466 LysR substrate binding domain GG844_00880 PF00106 short chain dehydrogenase GG844_00885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_00885 PF00672 HAMP domain GG844_00885 PF02743 Cache domain GG844_00890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_00890 PF03466 LysR substrate binding domain GG844_00895 PF13460 NAD(P)H-binding GG844_00925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GG844_00930 PF05068 Mannitol repressor GG844_00935 PF01232 Mannitol dehydrogenase Rossmann domain GG844_00935 PF08125 Mannitol dehydrogenase C-terminal domain GG844_00940 PF02378 Phosphotransferase system, EIIC GG844_00940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GG844_00940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GG844_00950 PF04225 Opacity-associated protein A LysM-like domain GG844_00950 PF01551 Peptidase family M23 GG844_00960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GG844_00960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GG844_00960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GG844_00960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GG844_00965 PF00528 Binding-protein-dependent transport system inner membrane component GG844_00970 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_00975 PF00528 Binding-protein-dependent transport system inner membrane component GG844_00980 PF00005 ABC transporter GG844_00985 PF00793 DAHP synthetase I family GG844_00995 PF00672 HAMP domain GG844_00995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_01010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_01010 PF00672 HAMP domain GG844_01010 PF12729 Four helix bundle sensory module for signal transduction GG844_01020 PF00128 Alpha amylase, catalytic domain GG844_01020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GG844_01025 PF02264 LamB porin GG844_01030 PF07148 Maltose operon periplasmic protein precursor (MalM) GG844_01040 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GG844_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_01060 PF03466 LysR substrate binding domain GG844_01065 PF07681 DoxX GG844_01070 PF00730 HhH-GPD superfamily base excision DNA repair protein GG844_01070 PF06029 AlkA N-terminal domain GG844_01075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GG844_01075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GG844_01085 PF03600 Citrate transporter GG844_01090 PF07670 Nucleoside recognition GG844_01095 PF07670 Nucleoside recognition GG844_01100 PF00462 Glutaredoxin GG844_01105 PF00892 EamA-like transporter family GG844_01110 PF13609 Gram-negative porin GG844_01115 PF02566 OsmC-like protein GG844_01120 PF01047 MarR family GG844_01125 PF01557 Fumarylacetoacetate (FAA) hydrolase family GG844_01140 PF12833 Helix-turn-helix domain GG844_01145 PF01810 LysE type translocator GG844_01155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GG844_01165 PF00664 ABC transporter transmembrane region GG844_01165 PF00005 ABC transporter GG844_01175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GG844_01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_01185 PF03466 LysR substrate binding domain GG844_01190 PF00270 DEAD/DEAH box helicase GG844_01190 PF00271 Helicase conserved C-terminal domain GG844_01195 PF01554 MatE GG844_01200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_01200 PF08447 PAS fold GG844_01205 PF00391 PEP-utilising enzyme, mobile domain GG844_01205 PF02896 PEP-utilising enzyme, TIM barrel domain GG844_01205 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GG844_01210 PF03618 Kinase/pyrophosphorylase GG844_01220 PF01070 FMN-dependent dehydrogenase GG844_01225 PF02652 L-lactate permease GG844_01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_01230 PF03466 LysR substrate binding domain GG844_01245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_01245 PF08447 PAS fold GG844_01245 PF13426 PAS domain GG844_01250 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_01255 PF00005 ABC transporter GG844_01255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_01265 PF13654 AAA domain GG844_01265 PF05362 Lon protease (S16) C-terminal proteolytic domain GG844_01270 PF00672 HAMP domain GG844_01270 PF17200 Single Cache domain 2 GG844_01270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_01280 PF07690 Major Facilitator Superfamily GG844_01290 PF06865 Pyrimidine/purine nucleoside phosphorylase GG844_01295 PF02678 Pirin GG844_01295 PF05726 Pirin C-terminal cupin domain GG844_01305 PF00563 EAL domain GG844_01305 PF00990 Diguanylate cyclase, GGDEF domain GG844_01310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_01310 PF03466 LysR substrate binding domain GG844_01330 PF03707 Bacterial signalling protein N terminal repeat GG844_01330 PF00563 EAL domain GG844_01330 PF00990 Diguanylate cyclase, GGDEF domain GG844_01345 PF00990 Diguanylate cyclase, GGDEF domain GG844_01350 PF01047 MarR family GG844_01355 PF00072 Response regulator receiver domain GG844_01355 PF01584 CheW-like domain GG844_01365 PF00196 Bacterial regulatory proteins, luxR family GG844_01370 PF01906 Putative heavy-metal-binding GG844_01385 PF13302 Acetyltransferase (GNAT) domain GG844_01390 PF08402 TOBE domain GG844_01390 PF00005 ABC transporter GG844_01395 PF01547 Bacterial extracellular solute-binding protein GG844_01400 PF00528 Binding-protein-dependent transport system inner membrane component GG844_01400 PF14785 Maltose transport system permease protein MalF P2 domain GG844_01405 PF00528 Binding-protein-dependent transport system inner membrane component GG844_01420 PF08220 DeoR-like helix-turn-helix domain GG844_01420 PF00455 DeoR C terminal sensor domain GG844_01425 PF00990 Diguanylate cyclase, GGDEF domain GG844_01425 PF08448 PAS fold GG844_01450 PF00313 'Cold-shock' DNA-binding domain GG844_01460 PF05661 Protein of unknown function (DUF808) GG844_01465 PF05958 tRNA (Uracil-5-)-methyltransferase GG844_01475 PF05656 Protein of unknown function (DUF805) GG844_01485 PF01979 Amidohydrolase family GG844_01490 PF03476 MOSC N-terminal beta barrel domain GG844_01490 PF03476 MOSC N-terminal beta barrel domain GG844_01490 PF00111 2Fe-2S iron-sulfur cluster binding domain GG844_01490 PF03473 MOSC domain GG844_01490 PF03473 MOSC domain GG844_01490 PF00111 2Fe-2S iron-sulfur cluster binding domain GG844_01495 PF00672 HAMP domain GG844_01495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_01495 PF02743 Cache domain GG844_01525 PF00005 ABC transporter GG844_01530 PF01032 FecCD transport family GG844_01535 PF01497 Periplasmic binding protein GG844_01540 PF02472 Biopolymer transport protein ExbD/TolR GG844_01545 PF01618 MotA/TolQ/ExbB proton channel family GG844_01550 PF03544 Gram-negative bacterial TonB protein C-terminal GG844_01555 PF04055 Radical SAM superfamily GG844_01560 PF06228 Haem utilisation ChuX/HutX GG844_01565 PF01243 Pyridoxamine 5'-phosphate oxidase GG844_01570 PF00672 HAMP domain GG844_01570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_01575 PF05651 Putative sugar diacid recognition GG844_01575 PF17853 GGDEF-like domain GG844_01575 PF13556 PucR C-terminal helix-turn-helix domain GG844_01580 PF02447 GntP family permease GG844_01585 PF02595 Glycerate kinase family GG844_01610 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GG844_01610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GG844_01615 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GG844_01620 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GG844_01620 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GG844_01650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GG844_01655 PF03466 LysR substrate binding domain GG844_01655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_01670 PF00155 Aminotransferase class I and II GG844_01675 PF00107 Zinc-binding dehydrogenase GG844_01675 PF08240 Alcohol dehydrogenase GroES-like domain GG844_01710 PF00589 Phage integrase family GG844_01710 PF12167 Arm DNA-binding domain GG844_01720 PF03466 LysR substrate binding domain GG844_01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_01725 PF00291 Pyridoxal-phosphate dependent enzyme GG844_01740 PF02322 Cytochrome bd terminal oxidase subunit II GG844_01745 PF01654 Cytochrome bd terminal oxidase subunit I GG844_01750 PF00392 Bacterial regulatory proteins, gntR family GG844_01750 PF00155 Aminotransferase class I and II GG844_01755 PF00768 D-alanyl-D-alanine carboxypeptidase GG844_01765 PF03922 OmpW family GG844_01775 PF07504 Fungalysin/Thermolysin Propeptide Motif GG844_01775 PF01447 Thermolysin metallopeptidase, catalytic domain GG844_01775 PF02868 Thermolysin metallopeptidase, alpha-helical domain GG844_01775 PF03413 Peptidase propeptide and YPEB domain GG844_01775 PF04151 Bacterial pre-peptidase C-terminal domain GG844_01780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_01780 PF08447 PAS fold GG844_01780 PF13426 PAS domain GG844_01785 PF12262 Bacterial virulence factor lipase N-terminal GG844_01790 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GG844_01800 PF00128 Alpha amylase, catalytic domain GG844_01805 PF00248 Aldo/keto reductase family GG844_01820 PF00005 ABC transporter GG844_01825 PF00005 ABC transporter GG844_01825 PF12704 MacB-like periplasmic core domain GG844_01825 PF02687 FtsX-like permease family GG844_01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_01840 PF06580 Histidine kinase GG844_01840 PF07694 5TMR of 5TMR-LYT GG844_01840 PF13492 GAF domain GG844_01845 PF00072 Response regulator receiver domain GG844_01845 PF04397 LytTr DNA-binding domain GG844_01855 PF00990 Diguanylate cyclase, GGDEF domain GG844_01860 PF13520 Amino acid permease GG844_01875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GG844_01875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GG844_01880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GG844_01885 PF02566 OsmC-like protein GG844_01890 PF01595 Cyclin M transmembrane N-terminal domain GG844_01890 PF03471 Transporter associated domain GG844_01890 PF00571 CBS domain GG844_01895 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_01895 PF14602 Hexapeptide repeat of succinyl-transferase GG844_01895 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GG844_01900 PF00892 EamA-like transporter family GG844_01910 PF03466 LysR substrate binding domain GG844_01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_01930 PF13193 AMP-binding enzyme C-terminal domain GG844_01930 PF00501 AMP-binding enzyme GG844_01935 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GG844_01940 PF01329 Pterin 4 alpha carbinolamine dehydratase GG844_01945 PF00583 Acetyltransferase (GNAT) family GG844_01950 PF00202 Aminotransferase class-III GG844_01955 PF06339 Ectoine synthase GG844_01960 PF13840 ACT domain GG844_01960 PF00696 Amino acid kinase family GG844_01970 PF00118 TCP-1/cpn60 chaperonin family GG844_01975 PF00166 Chaperonin 10 Kd subunit GG844_01980 PF00571 CBS domain GG844_01980 PF01769 Divalent cation transporter GG844_01980 PF03448 MgtE intracellular N domain GG844_01995 PF17944 Arginine decarboxylase C-terminal helical extension GG844_01995 PF17810 Arginine decarboxylase helical bundle domain GG844_01995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GG844_02000 PF00491 Arginase family GG844_02005 PF04389 Peptidase family M28 GG844_02005 PF04151 Bacterial pre-peptidase C-terminal domain GG844_02010 PF07504 Fungalysin/Thermolysin Propeptide Motif GG844_02010 PF01447 Thermolysin metallopeptidase, catalytic domain GG844_02010 PF02868 Thermolysin metallopeptidase, alpha-helical domain GG844_02010 PF04151 Bacterial pre-peptidase C-terminal domain GG844_02010 PF03413 Peptidase propeptide and YPEB domain GG844_02015 PF18416 N-acetylglucosamine binding protein domain 2 GG844_02015 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GG844_02020 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GG844_02025 PF01575 MaoC like domain GG844_02030 PF12849 PBP superfamily domain GG844_02040 PF00575 S1 RNA binding domain GG844_02040 PF00773 RNB domain GG844_02040 PF08206 Ribonuclease B OB domain GG844_02045 PF03880 DbpA RNA binding domain GG844_02045 PF00270 DEAD/DEAH box helicase GG844_02045 PF00271 Helicase conserved C-terminal domain GG844_02055 PF00884 Sulfatase GG844_02060 PF00294 pfkB family carbohydrate kinase GG844_02075 PF13419 Haloacid dehalogenase-like hydrolase GG844_02085 PF02796 Helix-turn-helix domain of resolvase GG844_02085 PF00239 Resolvase, N terminal domain GG844_02110 PF13597 Anaerobic ribonucleoside-triphosphate reductase GG844_02110 PF03477 ATP cone domain GG844_02120 PF00155 Aminotransferase class I and II GG844_02125 PF18030 RimK PreATP-grasp domain GG844_02125 PF08443 RimK-like ATP-grasp domain GG844_02130 PF02378 Phosphotransferase system, EIIC GG844_02130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GG844_02135 PF00294 pfkB family carbohydrate kinase GG844_02140 PF00381 PTS HPr component phosphorylation site GG844_02140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GG844_02145 PF00356 Bacterial regulatory proteins, lacI family GG844_02145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GG844_02150 PF12320 Type 5 capsule protein repressor C-terminal domain GG844_02150 PF00149 Calcineurin-like phosphoesterase GG844_02155 PF13476 AAA domain GG844_02160 PF00072 Response regulator receiver domain GG844_02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_02165 PF00155 Aminotransferase class I and II GG844_02175 PF00654 Voltage gated chloride channel GG844_02180 PF07683 Cobalamin synthesis protein cobW C-terminal domain GG844_02180 PF02492 CobW/HypB/UreG, nucleotide-binding domain GG844_02185 PF01926 50S ribosome-binding GTPase GG844_02190 PF02705 K+ potassium transporter GG844_02195 PF10371 Domain of unknown function GG844_02195 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GG844_02195 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GG844_02195 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GG844_02195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GG844_02200 PF00512 His Kinase A (phospho-acceptor) domain GG844_02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_02200 PF02702 Osmosensitive K+ channel His kinase sensor domain GG844_02200 PF13493 Domain of unknown function (DUF4118) GG844_02205 PF00486 Transcriptional regulatory protein, C terminal GG844_02205 PF00072 Response regulator receiver domain GG844_02210 PF02416 mttA/Hcf106 family GG844_02215 PF09335 SNARE associated Golgi protein GG844_02225 PF10388 EAL-domain associated signalling protein domain GG844_02225 PF00563 EAL domain GG844_02235 PF01292 Prokaryotic cytochrome b561 GG844_02240 PF04264 YceI-like domain GG844_02245 PF01226 Formate/nitrite transporter GG844_02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_02250 PF03466 LysR substrate binding domain GG844_02255 PF06496 Protein of unknown function (DUF1097) GG844_02260 PF11398 Protein of unknown function (DUF2813) GG844_02265 PF00149 Calcineurin-like phosphoesterase GG844_02265 PF02872 5'-nucleotidase, C-terminal domain GG844_02270 PF03741 Integral membrane protein TerC family GG844_02285 PF03831 PhnA domain GG844_02285 PF08274 PhnA Zinc-Ribbon GG844_02320 PF00990 Diguanylate cyclase, GGDEF domain GG844_02320 PF17151 Periplasmic sensor domain GG844_02340 PF00990 Diguanylate cyclase, GGDEF domain GG844_02340 PF17158 Membrane-associated sensor, integral membrane domain GG844_02355 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GG844_02355 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GG844_02355 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GG844_02360 PF02233 NAD(P) transhydrogenase beta subunit GG844_02370 PF00072 Response regulator receiver domain GG844_02370 PF00486 Transcriptional regulatory protein, C terminal GG844_02385 PF03701 Uncharacterised protein family (UPF0181) GG844_02390 PF01381 Helix-turn-helix GG844_02410 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII GG844_02415 PF10734 Protein of unknown function (DUF2523) GG844_02420 PF05707 Zonular occludens toxin (Zot) GG844_02430 PF01376 Heat-labile enterotoxin beta chain GG844_02435 PF01253 Translation initiation factor SUI1 GG844_02445 PF01820 D-ala D-ala ligase N-terminus GG844_02445 PF07478 D-ala D-ala ligase C-terminus GG844_02455 PF13380 CoA binding domain GG844_02455 PF13607 Succinyl-CoA ligase like flavodoxin domain GG844_02455 PF00583 Acetyltransferase (GNAT) family GG844_02460 PF03466 LysR substrate binding domain GG844_02460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_02465 PF07715 TonB-dependent Receptor Plug Domain GG844_02465 PF00593 TonB dependent receptor GG844_02475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GG844_02475 PF12793 Sugar transport-related sRNA regulator N-term GG844_02485 PF03061 Thioesterase superfamily GG844_02505 PF00043 Glutathione S-transferase, C-terminal domain GG844_02505 PF02798 Glutathione S-transferase, N-terminal domain GG844_02520 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_02520 PF12804 MobA-like NTP transferase domain GG844_02520 PF03479 Plants and Prokaryotes Conserved (PCC) domain GG844_02525 PF00005 ABC transporter GG844_02525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_02530 PF00528 Binding-protein-dependent transport system inner membrane component GG844_02530 PF12911 N-terminal TM domain of oligopeptide transport permease C GG844_02535 PF00528 Binding-protein-dependent transport system inner membrane component GG844_02540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GG844_02565 PF00854 POT family GG844_02575 PF07702 UTRA domain GG844_02575 PF00392 Bacterial regulatory proteins, gntR family GG844_02580 PF00528 Binding-protein-dependent transport system inner membrane component GG844_02585 PF00005 ABC transporter GG844_02595 PF00266 Aminotransferase class-V GG844_02605 PF13419 Haloacid dehalogenase-like hydrolase GG844_02610 PF01272 Transcription elongation factor, GreA/GreB, C-term GG844_02610 PF14760 Rnk N-terminus GG844_02615 PF13419 Haloacid dehalogenase-like hydrolase GG844_02630 PF01741 Large-conductance mechanosensitive channel, MscL GG844_02635 PF01268 Formate--tetrahydrofolate ligase GG844_02640 PF01625 Peptide methionine sulfoxide reductase GG844_02640 PF01641 SelR domain GG844_02645 PF01227 GTP cyclohydrolase I GG844_02650 PF03454 MoeA C-terminal region (domain IV) GG844_02650 PF03453 MoeA N-terminal region (domain I and II) GG844_02650 PF00994 Probable molybdopterin binding domain GG844_02655 PF00899 ThiF family GG844_02665 PF00581 Rhodanese-like domain GG844_02670 PF04198 Putative sugar-binding domain GG844_02680 PF00923 Transaldolase/Fructose-6-phosphate aldolase GG844_02685 PF00456 Transketolase, thiamine diphosphate binding domain GG844_02685 PF02780 Transketolase, C-terminal domain GG844_02685 PF02779 Transketolase, pyrimidine binding domain GG844_02700 PF01609 Transposase DDE domain GG844_02700 PF05598 Transposase domain (DUF772) GG844_02715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GG844_02715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GG844_02730 PF06942 GlpM protein GG844_02740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_02740 PF03466 LysR substrate binding domain GG844_02745 PF03992 Antibiotic biosynthesis monooxygenase GG844_02750 PF00881 Nitroreductase family GG844_02755 PF00873 AcrB/AcrD/AcrF family GG844_02770 PF04143 Sulphur transport GG844_02785 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_02785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GG844_02830 PF02378 Phosphotransferase system, EIIC GG844_02830 PF00367 phosphotransferase system, EIIB GG844_02840 PF08244 Glycosyl hydrolases family 32 C terminal GG844_02840 PF00251 Glycosyl hydrolases family 32 N-terminal domain GG844_02845 PF00294 pfkB family carbohydrate kinase GG844_02850 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GG844_02850 PF01266 FAD dependent oxidoreductase GG844_02855 PF00672 HAMP domain GG844_02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_02860 PF13488 Glycine zipper GG844_02860 PF00691 OmpA family GG844_02865 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GG844_02865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GG844_02870 PF13419 Haloacid dehalogenase-like hydrolase GG844_02875 PF00672 HAMP domain GG844_02875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_02875 PF12729 Four helix bundle sensory module for signal transduction GG844_02880 PF03606 C4-dicarboxylate anaerobic carrier GG844_02885 PF03313 Serine dehydratase alpha chain GG844_02885 PF03315 Serine dehydratase beta chain GG844_02890 PF00474 Sodium:solute symporter family GG844_02910 PF00356 Bacterial regulatory proteins, lacI family GG844_02915 PF00196 Bacterial regulatory proteins, luxR family GG844_02915 PF00072 Response regulator receiver domain GG844_02920 PF07730 Histidine kinase GG844_02920 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GG844_02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_02920 PF00672 HAMP domain GG844_02925 PF13187 4Fe-4S dicluster domain GG844_02925 PF12838 4Fe-4S dicluster domain GG844_02935 PF01568 Molydopterin dinucleotide binding domain GG844_02935 PF00384 Molybdopterin oxidoreductase GG844_02935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GG844_02940 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GG844_02945 PF03264 NapC/NirT cytochrome c family, N-terminal region GG844_02955 PF01966 HD domain GG844_02960 PF00196 Bacterial regulatory proteins, luxR family GG844_02960 PF00072 Response regulator receiver domain GG844_02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_02965 PF07730 Histidine kinase GG844_02965 PF05231 MASE1 GG844_02970 PF07690 Major Facilitator Superfamily GG844_02980 PF00528 Binding-protein-dependent transport system inner membrane component GG844_02985 PF00005 ABC transporter GG844_02985 PF08402 TOBE domain GG844_02990 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GG844_03000 PF02803 Thiolase, C-terminal domain GG844_03000 PF00108 Thiolase, N-terminal domain GG844_03005 PF00106 short chain dehydrogenase GG844_03010 PF07549 SecD/SecF GG Motif GG844_03010 PF02355 Protein export membrane protein GG844_03015 PF13721 SecD export protein N-terminal TM region GG844_03015 PF07549 SecD/SecF GG Motif GG844_03015 PF02355 Protein export membrane protein GG844_03030 PF17158 Membrane-associated sensor, integral membrane domain GG844_03030 PF00990 Diguanylate cyclase, GGDEF domain GG844_03035 PF00483 Nucleotidyl transferase GG844_03040 PF00704 Glycosyl hydrolases family 18 GG844_03040 PF06483 Chitinase C GG844_03045 PF00465 Iron-containing alcohol dehydrogenase GG844_03055 PF00072 Response regulator receiver domain GG844_03055 PF14532 Sigma-54 interaction domain GG844_03055 PF02954 Bacterial regulatory protein, Fis family GG844_03060 PF02743 Cache domain GG844_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_03060 PF00512 His Kinase A (phospho-acceptor) domain GG844_03070 PF07690 Major Facilitator Superfamily GG844_03075 PF00224 Pyruvate kinase, barrel domain GG844_03075 PF02887 Pyruvate kinase, alpha/beta domain GG844_03080 PF00512 His Kinase A (phospho-acceptor) domain GG844_03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_03080 PF01627 Hpt domain GG844_03080 PF00672 HAMP domain GG844_03080 PF00072 Response regulator receiver domain GG844_03085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GG844_03090 PF02142 MGS-like domain GG844_03095 PF00857 Isochorismatase family GG844_03100 PF01219 Prokaryotic diacylglycerol kinase GG844_03115 PF13361 UvrD-like helicase C-terminal domain GG844_03115 PF00580 UvrD/REP helicase N-terminal domain GG844_03115 PF12462 DNA helicase IV / RNA helicase N terminal GG844_03120 PF12805 FUSC-like inner membrane protein yccS GG844_03125 PF13188 PAS domain GG844_03125 PF08448 PAS fold GG844_03125 PF00512 His Kinase A (phospho-acceptor) domain GG844_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_03125 PF00072 Response regulator receiver domain GG844_03150 PF00005 ABC transporter GG844_03150 PF03459 TOBE domain GG844_03155 PF00528 Binding-protein-dependent transport system inner membrane component GG844_03165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GG844_03165 PF07685 CobB/CobQ-like glutamine amidotransferase domain GG844_03200 PF00072 Response regulator receiver domain GG844_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_03200 PF00512 His Kinase A (phospho-acceptor) domain GG844_03200 PF09308 LuxQ, periplasmic GG844_03205 PF13407 Periplasmic binding protein domain GG844_03215 PF01541 GIY-YIG catalytic domain GG844_03220 PF04337 Protein of unknown function, DUF480 GG844_03230 PF04363 Protein of unknown function (DUF496) GG844_03245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GG844_03245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GG844_03250 PF00230 Major intrinsic protein GG844_03255 PF04324 BFD-like [2Fe-2S] binding domain GG844_03255 PF01266 FAD dependent oxidoreductase GG844_03260 PF00890 FAD binding domain GG844_03265 PF13183 4Fe-4S dicluster domain GG844_03265 PF02754 Cysteine-rich domain GG844_03270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GG844_03270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GG844_03275 PF00085 Thioredoxin GG844_03280 PF07690 Major Facilitator Superfamily GG844_03305 PF03466 LysR substrate binding domain GG844_03305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_03310 PF00528 Binding-protein-dependent transport system inner membrane component GG844_03315 PF00528 Binding-protein-dependent transport system inner membrane component GG844_03320 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_03325 PF00005 ABC transporter GG844_03335 PF05762 VWA domain containing CoxE-like protein GG844_03340 PF17868 AAA lid domain GG844_03340 PF07728 AAA domain (dynein-related subfamily) GG844_03340 PF12592 Protein of unknown function (DUF3763) GG844_03345 PF00293 NUDIX domain GG844_03350 PF01212 Beta-eliminating lyase GG844_03355 PF00034 Cytochrome c GG844_03360 PF00440 Bacterial regulatory proteins, tetR family GG844_03360 PF08361 MAATS-type transcriptional repressor, C-terminal region GG844_03365 PF00271 Helicase conserved C-terminal domain GG844_03365 PF00270 DEAD/DEAH box helicase GG844_03370 PF04336 Acyl carrier protein phosphodiesterase GG844_03380 PF03222 Tryptophan/tyrosine permease family GG844_03385 PF12729 Four helix bundle sensory module for signal transduction GG844_03385 PF00672 HAMP domain GG844_03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_03390 PF16363 GDP-mannose 4,6 dehydratase GG844_03395 PF03746 LamB/YcsF family GG844_03405 PF02626 Carboxyltransferase domain, subdomain A and B GG844_03415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GG844_03415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GG844_03425 PF00005 ABC transporter GG844_03430 PF13472 GDSL-like Lipase/Acylhydrolase family GG844_03435 PF07055 Enoyl reductase FAD binding domain GG844_03435 PF12241 Trans-2-enoyl-CoA reductase catalytic region GG844_03435 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GG844_03440 PF00563 EAL domain GG844_03440 PF00498 FHA domain GG844_03440 PF00990 Diguanylate cyclase, GGDEF domain GG844_03455 PF00226 DnaJ domain GG844_03455 PF00684 DnaJ central domain GG844_03455 PF01556 DnaJ C terminal domain GG844_03515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GG844_03580 PF01797 Transposase IS200 like GG844_03600 PF07859 alpha/beta hydrolase fold GG844_03780 PF05016 ParE toxin of type II toxin-antitoxin system, parDE GG844_03790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GG844_03810 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_03815 PF05598 Transposase domain (DUF772) GG844_03815 PF01609 Transposase DDE domain GG844_03830 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA GG844_03835 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system GG844_03895 PF01965 DJ-1/PfpI family GG844_03895 PF12833 Helix-turn-helix domain GG844_03935 PF01555 DNA methylase GG844_03955 PF05016 ParE toxin of type II toxin-antitoxin system, parDE GG844_03960 PF08212 Lipocalin-like domain GG844_03985 PF17676 LD-carboxypeptidase C-terminal domain GG844_03985 PF02016 LD-carboxypeptidase N-terminal domain GG844_04200 PF08212 Lipocalin-like domain GG844_04220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GG844_04275 PF02016 LD-carboxypeptidase N-terminal domain GG844_04275 PF17676 LD-carboxypeptidase C-terminal domain GG844_04335 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH GG844_04370 PF01810 LysE type translocator GG844_04380 PF04229 GrpB protein GG844_04405 PF04229 GrpB protein GG844_04455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GG844_04485 PF02567 Phenazine biosynthesis-like protein GG844_04505 PF01381 Helix-turn-helix GG844_04510 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB GG844_04555 PF00589 Phage integrase family GG844_04555 PF13495 Phage integrase, N-terminal SAM-like domain GG844_04560 PF00453 Ribosomal protein L20 GG844_04565 PF01632 Ribosomal protein L35 GG844_04570 PF05198 Translation initiation factor IF-3, N-terminal domain GG844_04570 PF00707 Translation initiation factor IF-3, C-terminal domain GG844_04575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GG844_04575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GG844_04575 PF02824 TGS domain GG844_04575 PF03129 Anticodon binding domain GG844_04600 PF01609 Transposase DDE domain GG844_04600 PF05598 Transposase domain (DUF772) GG844_04610 PF08669 Glycine cleavage T-protein C-terminal barrel domain GG844_04610 PF01571 Aminomethyltransferase folate-binding domain GG844_04620 PF00464 Serine hydroxymethyltransferase GG844_04625 PF01597 Glycine cleavage H-protein GG844_04630 PF02347 Glycine cleavage system P-protein GG844_04640 PF01797 Transposase IS200 like GG844_04645 PF00194 Eukaryotic-type carbonic anhydrase GG844_04660 PF07943 Penicillin-binding protein 5, C-terminal domain GG844_04660 PF00768 D-alanyl-D-alanine carboxypeptidase GG844_04670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_04670 PF02743 Cache domain GG844_04670 PF00672 HAMP domain GG844_04675 PF07690 Major Facilitator Superfamily GG844_04715 PF13426 PAS domain GG844_04715 PF14827 Double sensory domain of two-component sensor kinase GG844_04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_04715 PF00672 HAMP domain GG844_04715 PF00512 His Kinase A (phospho-acceptor) domain GG844_04720 PF00486 Transcriptional regulatory protein, C terminal GG844_04720 PF00072 Response regulator receiver domain GG844_04740 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_04745 PF00128 Alpha amylase, catalytic domain GG844_04750 PF01292 Prokaryotic cytochrome b561 GG844_04760 PF00455 DeoR C terminal sensor domain GG844_04760 PF08220 DeoR-like helix-turn-helix domain GG844_04765 PF03611 PTS system sugar-specific permease component GG844_04770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GG844_04775 PF00596 Class II Aldolase and Adducin N-terminal domain GG844_04785 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GG844_04790 PF01261 Xylose isomerase-like TIM barrel GG844_04800 PF00486 Transcriptional regulatory protein, C terminal GG844_04800 PF00072 Response regulator receiver domain GG844_04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_04805 PF00672 HAMP domain GG844_04805 PF00512 His Kinase A (phospho-acceptor) domain GG844_04820 PF00871 Acetokinase family GG844_04830 PF07715 TonB-dependent Receptor Plug Domain GG844_04830 PF00593 TonB dependent receptor GG844_04835 PF12833 Helix-turn-helix domain GG844_04840 PF00005 ABC transporter GG844_04845 PF01032 FecCD transport family GG844_04850 PF01032 FecCD transport family GG844_04870 PF00801 PKD domain GG844_04870 PF05547 Immune inhibitor A peptidase M6 GG844_04875 PF03280 Proteobacterial lipase chaperone protein GG844_04880 PF00561 alpha/beta hydrolase fold GG844_04885 PF00672 HAMP domain GG844_04885 PF12729 Four helix bundle sensory module for signal transduction GG844_04885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_04895 PF00657 GDSL-like Lipase/Acylhydrolase GG844_04900 PF00990 Diguanylate cyclase, GGDEF domain GG844_04900 PF08448 PAS fold GG844_04910 PF07690 Major Facilitator Superfamily GG844_04915 PF03553 Na+/H+ antiporter family GG844_04925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_04925 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_04925 PF00512 His Kinase A (phospho-acceptor) domain GG844_04930 PF11849 Domain of unknown function (DUF3369) GG844_04940 PF01467 Cytidylyltransferase-like GG844_04945 PF02540 NAD synthase GG844_04950 PF03605 Anaerobic c4-dicarboxylate membrane transporter GG844_04955 PF00271 Helicase conserved C-terminal domain GG844_04955 PF00270 DEAD/DEAH box helicase GG844_04970 PF01797 Transposase IS200 like GG844_04990 PF00145 C-5 cytosine-specific DNA methylase GG844_05155 PF05840 Bacteriophage replication gene A protein (GPA) GG844_05220 PF00589 Phage integrase family GG844_05220 PF02899 Phage integrase, N-terminal SAM-like domain GG844_05225 PF00478 IMP dehydrogenase / GMP reductase domain GG844_05235 PF07885 Ion channel GG844_05245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GG844_05245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GG844_05250 PF01256 Carbohydrate kinase GG844_05250 PF03853 YjeF-related protein N-terminus GG844_05260 PF00072 Response regulator receiver domain GG844_05275 PF03889 Alternative ribosome-rescue factor A GG844_05280 PF00313 'Cold-shock' DNA-binding domain GG844_05285 PF00970 Oxidoreductase FAD-binding domain GG844_05285 PF00175 Oxidoreductase NAD-binding domain GG844_05285 PF00042 Globin GG844_05290 PF01590 GAF domain GG844_05290 PF00158 Sigma-54 interaction domain GG844_05300 PF01546 Peptidase family M20/M25/M40 GG844_05300 PF07687 Peptidase dimerisation domain GG844_05305 PF07670 Nucleoside recognition GG844_05305 PF07662 Na+ dependent nucleoside transporter C-terminus GG844_05305 PF01773 Na+ dependent nucleoside transporter N-terminus GG844_05320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_05320 PF00672 HAMP domain GG844_05320 PF02743 Cache domain GG844_05325 PF07726 ATPase family associated with various cellular activities (AAA) GG844_05325 PF17863 AAA lid domain GG844_05330 PF01882 Protein of unknown function DUF58 GG844_05345 PF07584 Aerotolerance regulator N-terminal GG844_05345 PF13519 von Willebrand factor type A domain GG844_05360 PF00313 'Cold-shock' DNA-binding domain GG844_05365 PF00990 Diguanylate cyclase, GGDEF domain GG844_05365 PF08448 PAS fold GG844_05365 PF00563 EAL domain GG844_05375 PF12843 Putative quorum-sensing-regulated virulence factor GG844_05385 PF01212 Beta-eliminating lyase GG844_05390 PF03222 Tryptophan/tyrosine permease family GG844_05395 PF00582 Universal stress protein family GG844_05405 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GG844_05405 PF13244 Domain of unknown function (DUF4040) GG844_05405 PF00361 Proton-conducting membrane transporter GG844_05405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GG844_05425 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GG844_05430 PF03334 Na+/H+ antiporter subunit GG844_05435 PF00175 Oxidoreductase NAD-binding domain GG844_05435 PF00042 Globin GG844_05435 PF00970 Oxidoreductase FAD-binding domain GG844_05440 PF01327 Polypeptide deformylase GG844_05445 PF00041 Fibronectin type III domain GG844_05445 PF12561 ToxR activated gene A lipoprotein domain GG844_05450 PF01266 FAD dependent oxidoreductase GG844_05470 PF00072 Response regulator receiver domain GG844_05470 PF00158 Sigma-54 interaction domain GG844_05470 PF02954 Bacterial regulatory protein, Fis family GG844_05475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_05475 PF02743 Cache domain GG844_05475 PF00512 His Kinase A (phospho-acceptor) domain GG844_05495 PF04362 Bacterial Fe(2+) trafficking GG844_05500 PF00633 Helix-hairpin-helix motif GG844_05500 PF10576 Iron-sulfur binding domain of endonuclease III GG844_05500 PF00730 HhH-GPD superfamily base excision DNA repair protein GG844_05500 PF14815 NUDIX domain GG844_05505 PF02390 Putative methyltransferase GG844_05510 PF04960 Glutaminase GG844_05515 PF06969 HemN C-terminal domain GG844_05515 PF04055 Radical SAM superfamily GG844_05520 PF01725 Ham1 family GG844_05530 PF02594 Uncharacterised ACR, YggU family COG1872 GG844_05535 PF02325 YGGT family GG844_05540 PF03807 NADP oxidoreductase coenzyme F420-dependent GG844_05540 PF14748 Pyrroline-5-carboxylate reductase dimerisation GG844_05545 PF01168 Alanine racemase, N-terminal domain GG844_05550 PF00437 Type II/IV secretion system protein GG844_05555 PF00437 Type II/IV secretion system protein GG844_05565 PF00579 tRNA synthetases class I (W and Y) GG844_05565 PF01479 S4 domain GG844_05570 PF03652 Holliday junction resolvase GG844_05575 PF02622 Uncharacterized ACR, COG1678 GG844_05580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GG844_05580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GG844_05585 PF04452 RNA methyltransferase GG844_05590 PF04231 Endonuclease I GG844_05595 PF10263 SprT-like family GG844_05595 PF17283 SprT-like zinc ribbon domain GG844_05600 PF02773 S-adenosylmethionine synthetase, C-terminal domain GG844_05600 PF02772 S-adenosylmethionine synthetase, central domain GG844_05600 PF00438 S-adenosylmethionine synthetase, N-terminal domain GG844_05605 PF02780 Transketolase, C-terminal domain GG844_05605 PF02779 Transketolase, pyrimidine binding domain GG844_05605 PF00456 Transketolase, thiamine diphosphate binding domain GG844_05610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_05610 PF03466 LysR substrate binding domain GG844_05615 PF00593 TonB dependent receptor GG844_05615 PF07715 TonB-dependent Receptor Plug Domain GG844_05620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GG844_05620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GG844_05625 PF00162 Phosphoglycerate kinase GG844_05630 PF01116 Fructose-bisphosphate aldolase class-II GG844_05640 PF05552 Conserved TM helix GG844_05640 PF00924 Mechanosensitive ion channel GG844_05645 PF01810 LysE type translocator GG844_05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_05650 PF03466 LysR substrate binding domain GG844_05655 PF04402 Protein of unknown function (DUF541) GG844_05660 PF02887 Pyruvate kinase, alpha/beta domain GG844_05660 PF00224 Pyruvate kinase, barrel domain GG844_05665 PF00455 DeoR C terminal sensor domain GG844_05665 PF08220 DeoR-like helix-turn-helix domain GG844_05670 PF01380 SIS domain GG844_05675 PF03480 Bacterial extracellular solute-binding protein, family 7 GG844_05690 PF04542 Sigma-70 region 2 GG844_05690 PF00140 Sigma-70 factor, region 1.2 GG844_05690 PF03979 Sigma-70 factor, region 1.1 GG844_05690 PF04546 Sigma-70, non-essential region GG844_05690 PF04545 Sigma-70, region 4 GG844_05690 PF04539 Sigma-70 region 3 GG844_05695 PF08278 DNA primase DnaG DnaB-binding GG844_05695 PF10410 DnaB-helicase binding domain of primase GG844_05695 PF01807 CHC2 zinc finger GG844_05695 PF08275 DNA primase catalytic core, N-terminal domain GG844_05700 PF09424 Yqey-like protein GG844_05705 PF01165 Ribosomal protein S21 GG844_05710 PF00814 Glycoprotease family GG844_05715 PF00561 alpha/beta hydrolase fold GG844_05720 PF02660 Glycerol-3-phosphate acyltransferase GG844_05725 PF02152 Dihydroneopterin aldolase GG844_05730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GG844_05735 PF02673 Bacitracin resistance protein BacA GG844_05740 PF04977 Septum formation initiator GG844_05745 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GG844_05750 PF02542 YgbB family GG844_05755 PF01142 tRNA pseudouridine synthase D (TruD) GG844_05760 PF01975 Survival protein SurE GG844_05770 PF01476 LysM domain GG844_05770 PF01551 Peptidase family M23 GG844_05775 PF04539 Sigma-70 region 3 GG844_05775 PF04542 Sigma-70 region 2 GG844_05775 PF00140 Sigma-70 factor, region 1.2 GG844_05775 PF04545 Sigma-70, region 4 GG844_05780 PF00488 MutS domain V GG844_05780 PF05190 MutS family domain IV GG844_05780 PF05188 MutS domain II GG844_05780 PF05192 MutS domain III GG844_05780 PF01624 MutS domain I GG844_05785 PF00291 Pyridoxal-phosphate dependent enzyme GG844_05795 PF00528 Binding-protein-dependent transport system inner membrane component GG844_05800 PF00528 Binding-protein-dependent transport system inner membrane component GG844_05805 PF00005 ABC transporter GG844_05805 PF12857 TOBE-like domain GG844_05810 PF02464 Competence-damaged protein GG844_05815 PF00154 recA bacterial DNA recombination protein GG844_05820 PF02631 RecX family GG844_05825 PF01411 tRNA synthetases class II (A) GG844_05825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GG844_05825 PF02272 DHHA1 domain GG844_05830 PF01842 ACT domain GG844_05830 PF13840 ACT domain GG844_05830 PF00696 Amino acid kinase family GG844_05835 PF02599 Global regulator protein family GG844_05880 PF04277 Oxaloacetate decarboxylase, gamma chain GG844_05885 PF02436 Conserved carboxylase domain GG844_05885 PF00364 Biotin-requiring enzyme GG844_05885 PF00682 HMGL-like GG844_05890 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GG844_05900 PF09335 SNARE associated Golgi protein GG844_05905 PF05193 Peptidase M16 inactive domain GG844_05905 PF00675 Insulinase (Peptidase family M16) GG844_05910 PF04262 Glutamate-cysteine ligase GG844_05915 PF02664 S-Ribosylhomocysteinase (LuxS) GG844_05920 PF01595 Cyclin M transmembrane N-terminal domain GG844_05920 PF03471 Transporter associated domain GG844_05920 PF00571 CBS domain GG844_05925 PF01578 Cytochrome C assembly protein GG844_05930 PF02881 SRP54-type protein, helical bundle domain GG844_05930 PF00448 SRP54-type protein, GTPase domain GG844_05930 PF02978 Signal peptide binding domain GG844_05935 PF00886 Ribosomal protein S16 GG844_05940 PF05239 PRC-barrel domain GG844_05940 PF01782 RimM N-terminal domain GG844_05945 PF01746 tRNA (Guanine-1)-methyltransferase GG844_05950 PF01245 Ribosomal protein L19 GG844_05955 PF13180 PDZ domain GG844_05960 PF00595 PDZ domain GG844_05970 PF03969 AFG1-like ATPase GG844_05975 PF00572 Ribosomal protein L13 GG844_05980 PF00380 Ribosomal protein S9/S16 GG844_05985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GG844_05985 PF00355 Rieske [2Fe-2S] domain GG844_05990 PF00032 Cytochrome b(C-terminal)/b6/petD GG844_05990 PF00033 Cytochrome b/b6/petB GG844_05995 PF02167 Cytochrome C1 family GG844_06000 PF00043 Glutathione S-transferase, C-terminal domain GG844_06000 PF02798 Glutathione S-transferase, N-terminal domain GG844_06005 PF04386 Stringent starvation protein B GG844_06010 PF04972 BON domain GG844_06015 PF13580 SIS domain GG844_06020 PF02021 Uncharacterised protein family UPF0102 GG844_06025 PF04348 LppC putative lipoprotein GG844_06030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GG844_06040 PF00156 Phosphoribosyl transferase domain GG844_06045 PF00484 Carbonic anhydrase GG844_06050 PF00916 Sulfate permease family GG844_06050 PF01740 STAS domain GG844_06055 PF00005 ABC transporter GG844_06060 PF01061 ABC-2 type transporter GG844_06065 PF02569 Pantoate-beta-alanine ligase GG844_06070 PF02548 Ketopantoate hydroxymethyltransferase GG844_06075 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GG844_06080 PF01743 Poly A polymerase head domain GG844_06080 PF12627 Probable RNA and SrmB- binding site of polymerase A GG844_06080 PF12626 Polymerase A arginine-rich C-terminus GG844_06085 PF00749 tRNA synthetases class I (E and Q), catalytic domain GG844_06090 PF01258 Prokaryotic dksA/traR C4-type zinc finger GG844_06095 PF03749 Sugar fermentation stimulation protein RE domain GG844_06095 PF17746 SfsA N-terminal OB domain GG844_06105 PF00270 DEAD/DEAH box helicase GG844_06105 PF08482 ATP-dependent helicase C-terminal GG844_06105 PF00271 Helicase conserved C-terminal domain GG844_06105 PF04408 Helicase associated domain (HA2) GG844_06110 PF00905 Penicillin binding protein transpeptidase domain GG844_06110 PF00912 Transglycosylase GG844_06110 PF14814 Bifunctional transglycosylase second domain GG844_06115 PF01734 Patatin-like phospholipase GG844_06120 PF11791 Aconitate B N-terminal domain GG844_06120 PF00330 Aconitase family (aconitate hydratase) GG844_06120 PF06434 Aconitate hydratase 2 N-terminus GG844_06125 PF06062 Uncharacterised protein family (UPF0231) GG844_06130 PF00543 Nitrogen regulatory protein P-II GG844_06135 PF00909 Ammonium Transporter Family GG844_06140 PF13416 Bacterial extracellular solute-binding protein GG844_06150 PF08402 TOBE domain GG844_06150 PF00005 ABC transporter GG844_06155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GG844_06155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GG844_06155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GG844_06160 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GG844_06160 PF06165 Glycosyltransferase family 36 GG844_06165 PF02838 Glycosyl hydrolase family 20, domain 2 GG844_06165 PF00728 Glycosyl hydrolase family 20, catalytic domain GG844_06170 PF01869 BadF/BadG/BcrA/BcrD ATPase family GG844_06180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_06180 PF00005 ABC transporter GG844_06185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_06185 PF00005 ABC transporter GG844_06190 PF00528 Binding-protein-dependent transport system inner membrane component GG844_06190 PF12911 N-terminal TM domain of oligopeptide transport permease C GG844_06195 PF00528 Binding-protein-dependent transport system inner membrane component GG844_06200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GG844_06205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_06205 PF09308 LuxQ, periplasmic GG844_06205 PF00512 His Kinase A (phospho-acceptor) domain GG844_06205 PF00072 Response regulator receiver domain GG844_06210 PF08468 Methyltransferase small domain N-terminal GG844_06210 PF05175 Methyltransferase small domain GG844_06215 PF01594 AI-2E family transporter GG844_06225 PF00202 Aminotransferase class-III GG844_06230 PF01521 Iron-sulphur cluster biosynthesis GG844_06240 PF00873 AcrB/AcrD/AcrF family GG844_06245 PF04225 Opacity-associated protein A LysM-like domain GG844_06245 PF01551 Peptidase family M23 GG844_06250 PF00579 tRNA synthetases class I (W and Y) GG844_06250 PF01479 S4 domain GG844_06255 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GG844_06260 PF13609 Gram-negative porin GG844_06265 PF01272 Transcription elongation factor, GreA/GreB, C-term GG844_06265 PF03449 Transcription elongation factor, N-terminal GG844_06270 PF01985 CRS1 / YhbY (CRM) domain GG844_06275 PF01728 FtsJ-like methyltransferase GG844_06280 PF01434 Peptidase family M41 GG844_06280 PF17862 AAA+ lid domain GG844_06280 PF00004 ATPase family associated with various cellular activities (AAA) GG844_06280 PF06480 FtsH Extracellular GG844_06285 PF00809 Pterin binding enzyme GG844_06290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GG844_06290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GG844_06290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GG844_06290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GG844_06295 PF03840 Preprotein translocase SecG subunit GG844_06310 PF17384 RimP C-terminal SH3 domain GG844_06310 PF02576 RimP N-terminal domain GG844_06315 PF13184 NusA-like KH domain GG844_06315 PF00575 S1 RNA binding domain GG844_06315 PF08529 NusA N-terminal domain GG844_06320 PF08364 Bacterial translation initiation factor IF-2 associated region GG844_06320 PF11987 Translation-initiation factor 2 GG844_06320 PF00009 Elongation factor Tu GTP binding domain GG844_06320 PF04760 Translation initiation factor IF-2, N-terminal region GG844_06325 PF02033 Ribosome-binding factor A GG844_06330 PF01509 TruB family pseudouridylate synthase (N terminal domain) GG844_06330 PF09157 Pseudouridine synthase II TruB, C-terminal GG844_06330 PF16198 tRNA pseudouridylate synthase B C-terminal domain GG844_06335 PF00312 Ribosomal protein S15 GG844_06340 PF03725 3' exoribonuclease family, domain 2 GG844_06340 PF00575 S1 RNA binding domain GG844_06340 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GG844_06340 PF00013 KH domain GG844_06340 PF01138 3' exoribonuclease family, domain 1 GG844_06345 PF07719 Tetratricopeptide repeat GG844_06345 PF13181 Tetratricopeptide repeat GG844_06370 PF00563 EAL domain GG844_06370 PF00990 Diguanylate cyclase, GGDEF domain GG844_06370 PF03707 Bacterial signalling protein N terminal repeat GG844_06380 PF13508 Acetyltransferase (GNAT) domain GG844_06395 PF00990 Diguanylate cyclase, GGDEF domain GG844_06395 PF03707 Bacterial signalling protein N terminal repeat GG844_06395 PF00563 EAL domain GG844_06400 PF16658 Class II release factor RF3, C-terminal domain GG844_06400 PF00009 Elongation factor Tu GTP binding domain GG844_06400 PF03144 Elongation factor Tu domain 2 GG844_06405 PF00271 Helicase conserved C-terminal domain GG844_06405 PF00270 DEAD/DEAH box helicase GG844_06410 PF05175 Methyltransferase small domain GG844_06415 PF05525 Branched-chain amino acid transport protein GG844_06425 PF00152 tRNA synthetases class II (D, K and N) GG844_06425 PF01336 OB-fold nucleic acid binding domain GG844_06430 PF02954 Bacterial regulatory protein, Fis family GG844_06430 PF00072 Response regulator receiver domain GG844_06430 PF00158 Sigma-54 interaction domain GG844_06445 PF00248 Aldo/keto reductase family GG844_06450 PF02976 DNA mismatch repair enzyme MutH GG844_06455 PF00293 NUDIX domain GG844_06460 PF00391 PEP-utilising enzyme, mobile domain GG844_06460 PF05524 PEP-utilising enzyme, N-terminal GG844_06460 PF01590 GAF domain GG844_06460 PF02896 PEP-utilising enzyme, TIM barrel domain GG844_06465 PF01925 Sulfite exporter TauE/SafE GG844_06470 PF01790 Prolipoprotein diacylglyceryl transferase GG844_06475 PF00303 Thymidylate synthase GG844_06480 PF02690 Na+/Pi-cotransporter GG844_06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_06485 PF03466 LysR substrate binding domain GG844_06490 PF01022 Bacterial regulatory protein, arsR family GG844_06495 PF01649 Ribosomal protein S20 GG844_06500 PF03023 Lipid II flippase MurJ GG844_06505 PF01687 Riboflavin kinase GG844_06505 PF06574 FAD synthetase GG844_06510 PF08264 Anticodon-binding domain of tRNA GG844_06510 PF00133 tRNA synthetases class I (I, L, M and V) GG844_06510 PF06827 Zinc finger found in FPG and IleRS GG844_06515 PF01252 Signal peptidase (SPase) II GG844_06520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GG844_06525 PF02401 LytB protein GG844_06530 PF02554 Carbon starvation protein CstA GG844_06545 PF13580 SIS domain GG844_06550 PF03702 Anhydro-N-acetylmuramic acid kinase GG844_06555 PF00933 Glycosyl hydrolase family 3 N terminal domain GG844_06560 PF04397 LytTr DNA-binding domain GG844_06560 PF00072 Response regulator receiver domain GG844_06565 PF07694 5TMR of 5TMR-LYT GG844_06565 PF06580 Histidine kinase GG844_06570 PF00793 DAHP synthetase I family GG844_06575 PF02153 Prephenate dehydrogenase GG844_06575 PF01817 Chorismate mutase type II GG844_06580 PF07238 PilZ domain GG844_06585 PF12848 ABC transporter GG844_06585 PF00005 ABC transporter GG844_06590 PF14718 Soluble lytic murein transglycosylase L domain GG844_06590 PF01464 Transglycosylase SLT domain GG844_06595 PF01371 Trp repressor protein GG844_06600 PF01931 Protein of unknown function DUF84 GG844_06605 PF00990 Diguanylate cyclase, GGDEF domain GG844_06605 PF00563 EAL domain GG844_06610 PF13416 Bacterial extracellular solute-binding protein GG844_06615 PF00800 Prephenate dehydratase GG844_06615 PF01817 Chorismate mutase type II GG844_06620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GG844_06625 PF13525 Outer membrane lipoprotein GG844_06630 PF00849 RNA pseudouridylate synthase GG844_06630 PF01479 S4 domain GG844_06640 PF07724 AAA domain (Cdc48 subfamily) GG844_06640 PF00004 ATPase family associated with various cellular activities (AAA) GG844_06640 PF17871 AAA lid domain GG844_06640 PF10431 C-terminal, D2-small domain, of ClpB protein GG844_06640 PF02861 Clp amino terminal domain, pathogenicity island component GG844_06675 PF00881 Nitroreductase family GG844_06680 PF00037 4Fe-4S binding domain GG844_06690 PF04381 Putative exonuclease, RdgC GG844_06695 PF00072 Response regulator receiver domain GG844_06695 PF00486 Transcriptional regulatory protein, C terminal GG844_06700 PF00989 PAS fold GG844_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_06700 PF11808 Phosphate regulon sensor protein PhoR GG844_06700 PF00512 His Kinase A (phospho-acceptor) domain GG844_06705 PF12849 PBP superfamily domain GG844_06710 PF02541 Ppx/GppA phosphatase family GG844_06715 PF02503 Polyphosphate kinase middle domain GG844_06715 PF13089 Polyphosphate kinase N-terminal domain GG844_06715 PF17941 Polyphosphate kinase C-terminal domain 1 GG844_06715 PF13090 Polyphosphate kinase C-terminal domain 2 GG844_06720 PF00528 Binding-protein-dependent transport system inner membrane component GG844_06725 PF00528 Binding-protein-dependent transport system inner membrane component GG844_06730 PF00005 ABC transporter GG844_06735 PF01895 PhoU domain GG844_06740 PF03976 Polyphosphate kinase 2 (PPK2) GG844_06745 PF03932 CutC family GG844_06750 PF10417 C-terminal domain of 1-Cys peroxiredoxin GG844_06750 PF00578 AhpC/TSA family GG844_06755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_06755 PF03466 LysR substrate binding domain GG844_06760 PF01274 Malate synthase GG844_06765 PF00463 Isocitrate lyase family GG844_06770 PF00571 CBS domain GG844_06775 PF02547 Queuosine biosynthesis protein GG844_06780 PF01702 Queuine tRNA-ribosyltransferase GG844_06785 PF02699 Preprotein translocase subunit GG844_06790 PF02355 Protein export membrane protein GG844_06790 PF13721 SecD export protein N-terminal TM region GG844_06790 PF07549 SecD/SecF GG Motif GG844_06795 PF02355 Protein export membrane protein GG844_06795 PF07549 SecD/SecF GG Motif GG844_06800 PF00459 Inositol monophosphatase family GG844_06805 PF00588 SpoU rRNA Methylase family GG844_06810 PF02082 Transcriptional regulator GG844_06815 PF00266 Aminotransferase class-V GG844_06820 PF01592 NifU-like N terminal domain GG844_06825 PF01521 Iron-sulphur cluster biosynthesis GG844_06830 PF00226 DnaJ domain GG844_06830 PF07743 HSCB C-terminal oligomerisation domain GG844_06835 PF00012 Hsp70 protein GG844_06840 PF00111 2Fe-2S iron-sulfur cluster binding domain GG844_06845 PF04384 Iron-sulphur cluster assembly GG844_06850 PF12404 Peptidase GG844_06850 PF00883 Cytosol aminopeptidase family, catalytic domain GG844_06855 PF00334 Nucleoside diphosphate kinase GG844_06860 PF04055 Radical SAM superfamily GG844_06865 PF13464 Domain of unknown function (DUF4115) GG844_06870 PF04551 GcpE protein GG844_06875 PF13393 Histidyl-tRNA synthetase GG844_06875 PF03129 Anticodon binding domain GG844_06880 PF09976 Tetratricopeptide repeat-like domain GG844_06885 PF13360 PQQ-like domain GG844_06890 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GG844_06890 PF01926 50S ribosome-binding GTPase GG844_06905 PF02601 Exonuclease VII, large subunit GG844_06905 PF13742 OB-fold nucleic acid binding domain GG844_06910 PF00571 CBS domain GG844_06910 PF00478 IMP dehydrogenase / GMP reductase domain GG844_06915 PF00117 Glutamine amidotransferase class-I GG844_06915 PF02540 NAD synthase GG844_06915 PF00958 GMP synthase C terminal domain GG844_06920 PF00704 Glycosyl hydrolases family 18 GG844_06920 PF06483 Chitinase C GG844_06925 PF01184 GPR1/FUN34/yaaH family GG844_06930 PF00857 Isochorismatase family GG844_06930 PF00550 Phosphopantetheine attachment site GG844_06935 PF00501 AMP-binding enzyme GG844_06935 PF13193 AMP-binding enzyme C-terminal domain GG844_06940 PF00425 chorismate binding enzyme GG844_06955 PF01497 Periplasmic binding protein GG844_06960 PF01032 FecCD transport family GG844_06965 PF01032 FecCD transport family GG844_06970 PF00005 ABC transporter GG844_06975 PF01648 4'-phosphopantetheinyl transferase superfamily GG844_06975 PF17837 4'-phosphopantetheinyl transferase N-terminal domain GG844_06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_06980 PF03466 LysR substrate binding domain GG844_06985 PF00753 Metallo-beta-lactamase superfamily GG844_06985 PF14863 Alkyl sulfatase dimerisation GG844_06985 PF14864 Alkyl sulfatase C-terminal GG844_06990 PF01235 Sodium:alanine symporter family GG844_06995 PF01266 FAD dependent oxidoreductase GG844_07000 PF03466 LysR substrate binding domain GG844_07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_07015 PF00072 Response regulator receiver domain GG844_07015 PF12431 Transcriptional regulator GG844_07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_07020 PF17203 Single cache domain 3 GG844_07025 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GG844_07030 PF02436 Conserved carboxylase domain GG844_07030 PF00364 Biotin-requiring enzyme GG844_07030 PF00682 HMGL-like GG844_07035 PF04277 Oxaloacetate decarboxylase, gamma chain GG844_07040 PF03390 2-hydroxycarboxylate transporter family GG844_07045 PF08218 Citrate lyase ligase C-terminal domain GG844_07050 PF06857 Malonate decarboxylase delta subunit (MdcD) GG844_07055 PF03328 HpcH/HpaI aldolase/citrate lyase family GG844_07060 PF04223 Citrate lyase, alpha subunit (CitF) GG844_07065 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GG844_07070 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GG844_07080 PF00588 SpoU rRNA Methylase family GG844_07080 PF08032 RNA 2'-O ribose methyltransferase substrate binding GG844_07085 PF11953 Domain of unknown function (DUF3470) GG844_07085 PF00037 4Fe-4S binding domain GG844_07155 PF00171 Aldehyde dehydrogenase family GG844_07160 PF12561 ToxR activated gene A lipoprotein domain GG844_07160 PF00041 Fibronectin type III domain GG844_07175 PF08534 Redoxin GG844_07180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_07185 PF00486 Transcriptional regulatory protein, C terminal GG844_07195 PF00245 Alkaline phosphatase GG844_07200 PF07769 psiF repeat GG844_07220 PF10671 Toxin co-regulated pilus biosynthesis protein Q GG844_07240 PF17456 Toxin-coregulated pilus protein S GG844_07245 PF00437 Type II/IV secretion system protein GG844_07250 PF00482 Type II secretion system (T2SS), protein F GG844_07255 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F GG844_07260 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family GG844_07265 PF06750 Bacterial Peptidase A24 N-terminal domain GG844_07265 PF01478 Type IV leader peptidase family GG844_07270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_07270 PF00672 HAMP domain GG844_07270 PF02743 Cache domain GG844_07285 PF01551 Peptidase family M23 GG844_07285 PF04225 Opacity-associated protein A LysM-like domain GG844_07300 PF00589 Phage integrase family GG844_07300 PF13356 Arm DNA-binding domain GG844_07310 PF00589 Phage integrase family GG844_07310 PF13356 Arm DNA-binding domain GG844_07320 PF01668 SmpB protein GG844_07325 PF03364 Polyketide cyclase / dehydrase and lipid transport GG844_07330 PF03658 RnfH family Ubiquitin GG844_07335 PF04355 SmpA / OmlA family GG844_07340 PF02463 RecF/RecN/SMC N terminal domain GG844_07345 PF01513 ATP-NAD kinase GG844_07350 PF01025 GrpE GG844_07355 PF00012 Hsp70 protein GG844_07360 PF01556 DnaJ C terminal domain GG844_07360 PF00226 DnaJ domain GG844_07360 PF00684 DnaJ central domain GG844_07365 PF00114 Pilin (bacterial filament) GG844_07365 PF07963 Prokaryotic N-terminal methylation motif GG844_07370 PF14245 Type IV pilin PilA GG844_07370 PF07963 Prokaryotic N-terminal methylation motif GG844_07395 PF03806 AbgT putative transporter family GG844_07400 PF14437 MafB19-like deaminase GG844_07405 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_07405 PF01464 Transglycosylase SLT domain GG844_07415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GG844_07415 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GG844_07415 PF02769 AIR synthase related protein, C-terminal domain GG844_07420 PF01797 Transposase IS200 like GG844_07430 PF06786 Uncharacterised protein family (UPF0253) GG844_07440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GG844_07440 PF03129 Anticodon binding domain GG844_07440 PF04073 Aminoacyl-tRNA editing domain GG844_07445 PF18389 TrmO C-terminal domain GG844_07445 PF01980 tRNA-methyltransferase O GG844_07450 PF01197 Ribosomal protein L31 GG844_07455 PF00444 Ribosomal protein L36 GG844_07460 PF03806 AbgT putative transporter family GG844_07465 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GG844_07475 PF13302 Acetyltransferase (GNAT) domain GG844_07490 PF04287 tRNA pseudouridine synthase C GG844_07495 PF00849 RNA pseudouridylate synthase GG844_07500 PF02780 Transketolase, C-terminal domain GG844_07500 PF02779 Transketolase, pyrimidine binding domain GG844_07500 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GG844_07505 PF00348 Polyprenyl synthetase GG844_07510 PF02609 Exonuclease VII small subunit GG844_07515 PF01618 MotA/TolQ/ExbB proton channel family GG844_07520 PF13677 Membrane MotB of proton-channel complex MotA/MotB GG844_07520 PF00691 OmpA family GG844_07525 PF02926 THUMP domain GG844_07525 PF02568 Thiamine biosynthesis protein (ThiI) GG844_07530 PF03466 LysR substrate binding domain GG844_07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_07535 PF04241 Protein of unknown function (DUF423) GG844_07540 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GG844_07540 PF01367 5'-3' exonuclease, C-terminal SAM fold GG844_07545 PF11892 Domain of unknown function (DUF3412) GG844_07545 PF03641 Possible lysine decarboxylase GG844_07545 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GG844_07550 PF00990 Diguanylate cyclase, GGDEF domain GG844_07560 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GG844_07560 PF14489 QueF-like protein GG844_07565 PF07348 Syd protein (SUKH-2) GG844_07570 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GG844_07575 PF03180 NLPA lipoprotein GG844_07580 PF00528 Binding-protein-dependent transport system inner membrane component GG844_07585 PF00005 ABC transporter GG844_07585 PF09383 NIL domain GG844_07595 PF00356 Bacterial regulatory proteins, lacI family GG844_07600 PF02378 Phosphotransferase system, EIIC GG844_07600 PF00367 phosphotransferase system, EIIB GG844_07605 PF16657 Maltogenic Amylase, C-terminal domain GG844_07605 PF00128 Alpha amylase, catalytic domain GG844_07630 PF13533 Biotin-lipoyl like GG844_07635 PF00873 AcrB/AcrD/AcrF family GG844_07640 PF01451 Low molecular weight phosphotyrosine protein phosphatase GG844_07645 PF02350 UDP-N-acetylglucosamine 2-epimerase GG844_07650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GG844_07650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GG844_07650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GG844_07655 PF14602 Hexapeptide repeat of succinyl-transferase GG844_07655 PF12464 Maltose acetyltransferase GG844_07675 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_07685 PF00534 Glycosyl transferases group 1 GG844_07685 PF00862 Sucrose synthase GG844_07695 PF03808 Glycosyl transferase WecB/TagA/CpsF family GG844_07710 PF17945 Beta/Gamma crystallin GG844_07710 PF12561 ToxR activated gene A lipoprotein domain GG844_07725 PF02397 Bacterial sugar transferase GG844_07735 PF10531 SLBB domain GG844_07735 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GG844_07735 PF02563 Polysaccharide biosynthesis/export protein GG844_07740 PF13807 G-rich domain on putative tyrosine kinase GG844_07740 PF02706 Chain length determinant protein GG844_07740 PF13614 AAA domain GG844_07760 PF00464 Serine hydroxymethyltransferase GG844_07770 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GG844_07770 PF04055 Radical SAM superfamily GG844_07775 PF03099 Biotin/lipoate A/B protein ligase family GG844_07780 PF04359 Protein of unknown function (DUF493) GG844_07785 PF00768 D-alanyl-D-alanine carboxypeptidase GG844_07785 PF07943 Penicillin-binding protein 5, C-terminal domain GG844_07790 PF05036 Sporulation related domain GG844_07790 PF03330 Lytic transglycolase GG844_07795 PF01098 Cell cycle protein GG844_07800 PF03717 Penicillin-binding Protein dimerisation domain GG844_07800 PF00905 Penicillin binding protein transpeptidase domain GG844_07805 PF02590 Predicted SPOUT methyltransferase GG844_07815 PF06144 DNA polymerase III, delta subunit GG844_07815 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GG844_07820 PF04390 Lipopolysaccharide-assembly GG844_07825 PF13603 Leucyl-tRNA synthetase, Domain 2 GG844_07825 PF00133 tRNA synthetases class I (I, L, M and V) GG844_07825 PF08264 Anticodon-binding domain of tRNA GG844_07830 PF07295 Zinc-ribbon containing domain GG844_07835 PF00795 Carbon-nitrogen hydrolase GG844_07840 PF03471 Transporter associated domain GG844_07840 PF00571 CBS domain GG844_07845 PF02130 Uncharacterized protein family UPF0054 GG844_07850 PF02562 PhoH-like protein GG844_07855 PF01938 TRAM domain GG844_07855 PF04055 Radical SAM superfamily GG844_07855 PF00919 Uncharacterized protein family UPF0004 GG844_07860 PF01494 FAD binding domain GG844_07865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GG844_07870 PF05524 PEP-utilising enzyme, N-terminal GG844_07870 PF00391 PEP-utilising enzyme, mobile domain GG844_07870 PF02896 PEP-utilising enzyme, TIM barrel domain GG844_07875 PF00381 PTS HPr component phosphorylation site GG844_07885 PF00291 Pyridoxal-phosphate dependent enzyme GG844_07895 PF04354 ZipA, C-terminal FtsZ-binding domain GG844_07900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GG844_07900 PF12826 Helix-hairpin-helix motif GG844_07900 PF00533 BRCA1 C Terminus (BRCT) domain GG844_07900 PF01653 NAD-dependent DNA ligase adenylation domain GG844_07900 PF03120 NAD-dependent DNA ligase OB-fold domain GG844_07905 PF13609 Gram-negative porin GG844_07915 PF13411 MerR HTH family regulatory protein GG844_07920 PF01957 NfeD-like C-terminal, partner-binding GG844_07925 PF16200 C-terminal region of band_7 GG844_07925 PF01145 SPFH domain / Band 7 family GG844_07930 PF00085 Thioredoxin GG844_07940 PF00106 short chain dehydrogenase GG844_07945 PF01370 NAD dependent epimerase/dehydratase family GG844_07945 PF08338 Domain of unknown function (DUF1731) GG844_07950 PF12850 Calcineurin-like phosphoesterase superfamily domain GG844_07960 PF17323 Trans-membrane regulatory protein ToxS GG844_07965 PF00486 Transcriptional regulatory protein, C terminal GG844_07970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_07970 PF00183 Hsp90 protein GG844_07975 PF05191 Adenylate kinase, active site lid GG844_07980 PF00762 Ferrochelatase GG844_07985 PF00854 POT family GG844_07990 PF02357 Transcription termination factor nusG GG844_07995 PF13537 Glutamine amidotransferase domain GG844_07995 PF00733 Asparagine synthase GG844_08000 PF02254 TrkA-N domain GG844_08000 PF00999 Sodium/hydrogen exchanger family GG844_08005 PF00480 ROK family GG844_08005 PF01047 MarR family GG844_08010 PF01979 Amidohydrolase family GG844_08015 PF00367 phosphotransferase system, EIIB GG844_08015 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GG844_08015 PF02378 Phosphotransferase system, EIIC GG844_08020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GG844_08020 PF00749 tRNA synthetases class I (E and Q), catalytic domain GG844_08030 PF01416 tRNA pseudouridine synthase GG844_08035 PF17848 Acetyl-coA carboxylase zinc finger domain GG844_08035 PF01039 Carboxyl transferase domain GG844_08040 PF08245 Mur ligase middle domain GG844_08040 PF02875 Mur ligase family, glutamate ligase domain GG844_08045 PF05036 Sporulation related domain GG844_08050 PF02674 Colicin V production protein GG844_08055 PF00156 Phosphoribosyl transferase domain GG844_08060 PF13726 Na+-H+ antiporter family GG844_08060 PF03553 Na+/H+ antiporter family GG844_08065 PF00929 Exonuclease GG844_08070 PF00691 OmpA family GG844_08070 PF18393 MotY N-terminal domain GG844_08075 PF10952 Protein of unknown function (DUF2753) GG844_08080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GG844_08085 PF00633 Helix-hairpin-helix motif GG844_08085 PF00730 HhH-GPD superfamily base excision DNA repair protein GG844_08085 PF10576 Iron-sulfur binding domain of endonuclease III GG844_08090 PF02508 Rnf-Nqr subunit, membrane protein GG844_08095 PF04205 FMN-binding domain GG844_08100 PF03116 NQR2, RnfD, RnfE family GG844_08105 PF12838 4Fe-4S dicluster domain GG844_08105 PF13375 RnfC Barrel sandwich hybrid domain GG844_08105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GG844_08105 PF10531 SLBB domain GG844_08110 PF04060 Putative Fe-S cluster GG844_08115 PF02508 Rnf-Nqr subunit, membrane protein GG844_08125 PF04851 Type III restriction enzyme, res subunit GG844_08125 PF02151 UvrB/uvrC motif GG844_08125 PF00271 Helicase conserved C-terminal domain GG844_08125 PF12344 Ultra-violet resistance protein B GG844_08125 PF17757 UvrB interaction domain GG844_08130 PF02954 Bacterial regulatory protein, Fis family GG844_08130 PF00158 Sigma-54 interaction domain GG844_08130 PF00072 Response regulator receiver domain GG844_08135 PF01627 Hpt domain GG844_08140 PF01933 Uncharacterised protein family UPF0052 GG844_08145 PF04055 Radical SAM superfamily GG844_08145 PF06463 Molybdenum Cofactor Synthesis C GG844_08150 PF00994 Probable molybdopterin binding domain GG844_08155 PF01967 MoaC family GG844_08160 PF02597 ThiS family GG844_08165 PF02391 MoaE protein GG844_08170 PF07694 5TMR of 5TMR-LYT GG844_08170 PF00990 Diguanylate cyclase, GGDEF domain GG844_08175 PF03061 Thioesterase superfamily GG844_08175 PF00392 Bacterial regulatory proteins, gntR family GG844_08175 PF07085 DRTGG domain GG844_08175 PF00571 CBS domain GG844_08180 PF00403 Heavy-metal-associated domain GG844_08185 PF01048 Phosphorylase superfamily GG844_08195 PF01588 Putative tRNA binding domain GG844_08195 PF09334 tRNA synthetases class I (M) GG844_08200 PF10609 NUBPL iron-transfer P-loop NTPase GG844_08205 PF00485 Phosphoribulokinase / Uridine kinase family GG844_08210 PF05170 AsmA family GG844_08215 PF12557 Cob(I)alamin adenosyltransferase N terminal GG844_08215 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GG844_08220 PF01451 Low molecular weight phosphotyrosine protein phosphatase GG844_08225 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GG844_08230 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GG844_08240 PF08281 Sigma-70, region 4 GG844_08240 PF04542 Sigma-70 region 2 GG844_08245 PF02803 Thiolase, C-terminal domain GG844_08245 PF00108 Thiolase, N-terminal domain GG844_08250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GG844_08250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GG844_08250 PF00378 Enoyl-CoA hydratase/isomerase GG844_08255 PF00881 Nitroreductase family GG844_08260 PF03466 LysR substrate binding domain GG844_08260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_08265 PF00072 Response regulator receiver domain GG844_08275 PF04304 Protein of unknown function (DUF454) GG844_08280 PF00156 Phosphoribosyl transferase domain GG844_08285 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GG844_08285 PF12169 DNA polymerase III subunits gamma and tau domain III GG844_08285 PF12170 DNA polymerase III tau subunit V interacting with alpha GG844_08290 PF02575 YbaB/EbfC DNA-binding family GG844_08295 PF02132 RecR protein GG844_08295 PF13662 Toprim domain GG844_08300 PF03692 Putative zinc- or iron-chelating domain GG844_08305 PF03692 Putative zinc- or iron-chelating domain GG844_08310 PF00106 short chain dehydrogenase GG844_08315 PF08496 Peptidase family S49 N-terminal GG844_08315 PF01343 Peptidase family S49 GG844_08320 PF00291 Pyridoxal-phosphate dependent enzyme GG844_08325 PF01037 Lrp/AsnC ligand binding domain GG844_08325 PF13404 AsnC-type helix-turn-helix domain GG844_08340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GG844_08350 PF08448 PAS fold GG844_08350 PF00990 Diguanylate cyclase, GGDEF domain GG844_08360 PF01022 Bacterial regulatory protein, arsR family GG844_08365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GG844_08365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GG844_08390 PF01161 Phosphatidylethanolamine-binding protein GG844_08410 PF03481 Putative GTP-binding controlling metal-binding GG844_08410 PF01300 Telomere recombination GG844_08425 PF00072 Response regulator receiver domain GG844_08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_08435 PF13426 PAS domain GG844_08435 PF13188 PAS domain GG844_08435 PF00512 His Kinase A (phospho-acceptor) domain GG844_08435 PF00989 PAS fold GG844_08440 PF00512 His Kinase A (phospho-acceptor) domain GG844_08440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_08445 PF00563 EAL domain GG844_08445 PF00990 Diguanylate cyclase, GGDEF domain GG844_08445 PF03707 Bacterial signalling protein N terminal repeat GG844_08445 PF13188 PAS domain GG844_08450 PF00158 Sigma-54 interaction domain GG844_08450 PF02954 Bacterial regulatory protein, Fis family GG844_08450 PF00072 Response regulator receiver domain GG844_08455 PF00512 His Kinase A (phospho-acceptor) domain GG844_08455 PF13188 PAS domain GG844_08455 PF08448 PAS fold GG844_08455 PF00072 Response regulator receiver domain GG844_08455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_08465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GG844_08470 PF00528 Binding-protein-dependent transport system inner membrane component GG844_08475 PF00528 Binding-protein-dependent transport system inner membrane component GG844_08475 PF12911 N-terminal TM domain of oligopeptide transport permease C GG844_08480 PF00005 ABC transporter GG844_08480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_08485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_08485 PF00005 ABC transporter GG844_08490 PF13409 Glutathione S-transferase, N-terminal domain GG844_08495 PF07085 DRTGG domain GG844_08495 PF01515 Phosphate acetyl/butaryl transferase GG844_08500 PF00871 Acetokinase family GG844_08505 PF04217 Protein of unknown function, DUF412 GG844_08510 PF09905 DNA-binding protein VF530 GG844_08520 PF02653 Branched-chain amino acid transport system / permease component GG844_08525 PF00005 ABC transporter GG844_08530 PF00990 Diguanylate cyclase, GGDEF domain GG844_08540 PF07516 SecA Wing and Scaffold domain GG844_08540 PF01043 SecA preprotein cross-linking domain GG844_08540 PF07517 SecA DEAD-like domain GG844_08540 PF02810 SEC-C motif GG844_08545 PF03548 Outer membrane lipoprotein carrier protein LolA GG844_08550 PF12002 MgsA AAA+ ATPase C terminal GG844_08550 PF16193 AAA C-terminal domain GG844_08550 PF00004 ATPase family associated with various cellular activities (AAA) GG844_08555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GG844_08555 PF02403 Seryl-tRNA synthetase N-terminal domain GG844_08560 PF00202 Aminotransferase class-III GG844_08565 PF04055 Radical SAM superfamily GG844_08565 PF06968 Biotin and Thiamin Synthesis associated domain GG844_08570 PF00155 Aminotransferase class I and II GG844_08575 PF08241 Methyltransferase domain GG844_08590 PF01435 Peptidase family M48 GG844_08600 PF00106 short chain dehydrogenase GG844_08625 PF16036 Chalcone isomerase-like GG844_08635 PF00206 Lyase GG844_08635 PF08328 Adenylosuccinate lyase C-terminal GG844_08640 PF04356 Protein of unknown function (DUF489) GG844_08650 PF00294 pfkB family carbohydrate kinase GG844_08660 PF13693 Winged helix-turn-helix DNA-binding GG844_08665 PF02914 Bacteriophage Mu transposase GG844_08665 PF09299 Mu transposase, C-terminal GG844_08665 PF02316 Mu DNA-binding domain GG844_08665 PF09039 Mu DNA binding, I gamma subdomain GG844_08670 PF13401 AAA domain GG844_08670 PF09077 Mu B transposition protein, C terminal GG844_08780 PF08461 Ribonuclease R winged-helix domain GG844_08785 PF11985 Protein of unknown function (DUF3486) GG844_08790 PF03237 Terminase-like family GG844_08795 PF06074 Protein of unknown function (DUF935) GG844_08830 PF10124 Mu-like prophage major head subunit gpT GG844_08840 PF07030 Protein of unknown function (DUF1320) GG844_08860 PF17482 Phage tail sheath C-terminal domain GG844_08860 PF04984 Phage tail sheath protein subtilisin-like domain GG844_08870 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 GG844_08890 PF06890 Bacteriophage Mu Gp45 protein GG844_08900 PF04865 Baseplate J-like protein GG844_08905 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GG844_08920 PF00816 H-NS histone family GG844_08925 PF03553 Na+/H+ antiporter family GG844_08930 PF08029 HisG, C-terminal domain GG844_08930 PF01634 ATP phosphoribosyltransferase GG844_08935 PF00815 Histidinol dehydrogenase GG844_08940 PF00155 Aminotransferase class I and II GG844_08945 PF00475 Imidazoleglycerol-phosphate dehydratase GG844_08945 PF08645 Polynucleotide kinase 3 phosphatase GG844_08950 PF00117 Glutamine amidotransferase class-I GG844_08955 PF00977 Histidine biosynthesis protein GG844_08960 PF00977 Histidine biosynthesis protein GG844_08965 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GG844_08965 PF01502 Phosphoribosyl-AMP cyclohydrolase GG844_08970 PF00849 RNA pseudouridylate synthase GG844_08975 PF03971 Monomeric isocitrate dehydrogenase GG844_08980 PF00313 'Cold-shock' DNA-binding domain GG844_08985 PF02617 ATP-dependent Clp protease adaptor protein ClpS GG844_08990 PF02861 Clp amino terminal domain, pathogenicity island component GG844_08990 PF07724 AAA domain (Cdc48 subfamily) GG844_08990 PF10431 C-terminal, D2-small domain, of ClpB protein GG844_08990 PF17871 AAA lid domain GG844_08990 PF00004 ATPase family associated with various cellular activities (AAA) GG844_08995 PF06826 Predicted Permease Membrane Region GG844_08995 PF02080 TrkA-C domain GG844_09000 PF00462 Glutaredoxin GG844_09005 PF00171 Aldehyde dehydrogenase family GG844_09005 PF00465 Iron-containing alcohol dehydrogenase GG844_09010 PF01380 SIS domain GG844_09010 PF01418 Helix-turn-helix domain, rpiR family GG844_09015 PF00282 Pyridoxal-dependent decarboxylase conserved domain GG844_09025 PF03956 Lysine exporter LysO GG844_09035 PF04993 TfoX N-terminal domain GG844_09035 PF04994 TfoX C-terminal domain GG844_09050 PF00989 PAS fold GG844_09050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_09050 PF00512 His Kinase A (phospho-acceptor) domain GG844_09060 PF00266 Aminotransferase class-V GG844_09075 PF18030 RimK PreATP-grasp domain GG844_09075 PF08443 RimK-like ATP-grasp domain GG844_09080 PF08003 Protein of unknown function (DUF1698) GG844_09085 PF13649 Methyltransferase domain GG844_09090 PF01904 Protein of unknown function DUF72 GG844_09095 PF00152 tRNA synthetases class II (D, K and N) GG844_09095 PF01336 OB-fold nucleic acid binding domain GG844_09095 PF02938 GAD domain GG844_09100 PF00265 Thymidine kinase GG844_09120 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GG844_09125 PF04865 Baseplate J-like protein GG844_09135 PF06890 Bacteriophage Mu Gp45 protein GG844_09155 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 GG844_09165 PF17482 Phage tail sheath C-terminal domain GG844_09165 PF04984 Phage tail sheath protein subtilisin-like domain GG844_09185 PF07030 Protein of unknown function (DUF1320) GG844_09195 PF10124 Mu-like prophage major head subunit gpT GG844_09230 PF06074 Protein of unknown function (DUF935) GG844_09235 PF03237 Terminase-like family GG844_09240 PF11985 Protein of unknown function (DUF3486) GG844_09245 PF08461 Ribonuclease R winged-helix domain GG844_09355 PF09077 Mu B transposition protein, C terminal GG844_09355 PF13401 AAA domain GG844_09360 PF09299 Mu transposase, C-terminal GG844_09360 PF02316 Mu DNA-binding domain GG844_09360 PF09039 Mu DNA binding, I gamma subdomain GG844_09360 PF02914 Bacteriophage Mu transposase GG844_09365 PF13693 Winged helix-turn-helix DNA-binding GG844_09380 PF00290 Tryptophan synthase alpha chain GG844_09385 PF00291 Pyridoxal-phosphate dependent enzyme GG844_09390 PF00218 Indole-3-glycerol phosphate synthase GG844_09390 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GG844_09395 PF02885 Glycosyl transferase family, helical bundle domain GG844_09395 PF00591 Glycosyl transferase family, a/b domain GG844_09400 PF00117 Glutamine amidotransferase class-I GG844_09405 PF04715 Anthranilate synthase component I, N terminal region GG844_09405 PF00425 chorismate binding enzyme GG844_09410 PF08056 Tryptophan operon leader peptide GG844_09415 PF02811 PHP domain GG844_09420 PF01300 Telomere recombination GG844_09425 PF00849 RNA pseudouridylate synthase GG844_09425 PF01479 S4 domain GG844_09430 PF00005 ABC transporter GG844_09430 PF00664 ABC transporter transmembrane region GG844_09435 PF00005 ABC transporter GG844_09435 PF00664 ABC transporter transmembrane region GG844_09440 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_09450 PF00266 Aminotransferase class-V GG844_09455 PF08448 PAS fold GG844_09455 PF00990 Diguanylate cyclase, GGDEF domain GG844_09460 PF02698 DUF218 domain GG844_09470 PF00390 Malic enzyme, N-terminal domain GG844_09470 PF03949 Malic enzyme, NAD binding domain GG844_09480 PF01259 SAICAR synthetase GG844_09500 PF00691 OmpA family GG844_09500 PF13488 Glycine zipper GG844_09515 PF02913 FAD linked oxidases, C-terminal domain GG844_09515 PF13183 4Fe-4S dicluster domain GG844_09515 PF01565 FAD binding domain GG844_09520 PF04191 Phospholipid methyltransferase GG844_09525 PF00089 Trypsin GG844_09535 PF00221 Aromatic amino acid lyase GG844_09540 PF01175 Urocanase Rossmann-like domain GG844_09540 PF17392 Urocanase C-terminal domain GG844_09540 PF17391 Urocanase N-terminal domain GG844_09545 PF00491 Arginase family GG844_09550 PF01979 Amidohydrolase family GG844_09555 PF07702 UTRA domain GG844_09555 PF00392 Bacterial regulatory proteins, gntR family GG844_09565 PF04269 Protein of unknown function, DUF440 GG844_09570 PF01132 Elongation factor P (EF-P) OB domain GG844_09570 PF08207 Elongation factor P (EF-P) KOW-like domain GG844_09570 PF09285 Elongation factor P, C-terminal GG844_09580 PF00563 EAL domain GG844_09580 PF00990 Diguanylate cyclase, GGDEF domain GG844_09580 PF13426 PAS domain GG844_09585 PF03104 DNA polymerase family B, exonuclease domain GG844_09585 PF00136 DNA polymerase family B GG844_09590 PF00072 Response regulator receiver domain GG844_09590 PF00196 Bacterial regulatory proteins, luxR family GG844_09595 PF01541 GIY-YIG catalytic domain GG844_09595 PF08459 UvrC Helix-hairpin-helix N-terminal GG844_09595 PF02151 UvrB/uvrC motif GG844_09600 PF01066 CDP-alcohol phosphatidyltransferase GG844_09625 PF00990 Diguanylate cyclase, GGDEF domain GG844_09625 PF00072 Response regulator receiver domain GG844_09635 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GG844_09635 PF01409 tRNA synthetases class II core domain (F) GG844_09640 PF03484 tRNA synthetase B5 domain GG844_09640 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GG844_09640 PF01588 Putative tRNA binding domain GG844_09640 PF03147 Ferredoxin-fold anticodon binding domain GG844_09640 PF03483 B3/4 domain GG844_09645 PF00216 Bacterial DNA-binding protein GG844_09660 PF05724 Thiopurine S-methyltransferase (TPMT) GG844_09670 PF02222 ATP-grasp domain GG844_09680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GG844_09680 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GG844_09685 PF04172 LrgB-like family GG844_09690 PF03788 LrgA family GG844_09695 PF00929 Exonuclease GG844_09695 PF08411 Exonuclease C-terminal GG844_09705 PF01641 SelR domain GG844_09710 PF02277 Phosphoribosyltransferase GG844_09715 PF02654 Cobalamin-5-phosphate synthase GG844_09720 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GG844_09730 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GG844_09735 PF01032 FecCD transport family GG844_09740 PF00005 ABC transporter GG844_09755 PF00672 HAMP domain GG844_09755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_09755 PF17200 Single Cache domain 2 GG844_09770 PF00994 Probable molybdopterin binding domain GG844_09780 PF00970 Oxidoreductase FAD-binding domain GG844_09780 PF00175 Oxidoreductase NAD-binding domain GG844_09780 PF00111 2Fe-2S iron-sulfur cluster binding domain GG844_09785 PF00268 Ribonucleotide reductase, small chain GG844_09790 PF03477 ATP cone domain GG844_09790 PF02867 Ribonucleotide reductase, barrel domain GG844_09790 PF00317 Ribonucleotide reductase, all-alpha domain GG844_09800 PF03989 DNA gyrase C-terminal domain, beta-propeller GG844_09800 PF00521 DNA gyrase/topoisomerase IV, subunit A GG844_09815 PF07690 Major Facilitator Superfamily GG844_09825 PF00925 GTP cyclohydrolase II GG844_09855 PF05951 Bacterial protein of unknown function (DUF882) GG844_09860 PF00753 Metallo-beta-lactamase superfamily GG844_09875 PF03480 Bacterial extracellular solute-binding protein, family 7 GG844_09885 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GG844_09890 PF17200 Single Cache domain 2 GG844_09890 PF07730 Histidine kinase GG844_09895 PF00196 Bacterial regulatory proteins, luxR family GG844_09895 PF00072 Response regulator receiver domain GG844_09900 PF01047 MarR family GG844_09905 PF02028 BCCT, betaine/carnitine/choline family transporter GG844_09910 PF01522 Polysaccharide deacetylase GG844_09915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GG844_09920 PF02378 Phosphotransferase system, EIIC GG844_09925 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GG844_09930 PF02056 Family 4 glycosyl hydrolase GG844_09930 PF11975 Family 4 glycosyl hydrolase C-terminal domain GG844_09935 PF04794 YdjC-like protein GG844_09940 PF00356 Bacterial regulatory proteins, lacI family GG844_09945 PF13506 Glycosyl transferase family 21 GG844_09950 PF04349 Periplasmic glucan biosynthesis protein, MdoG GG844_09955 PF00672 HAMP domain GG844_09955 PF17200 Single Cache domain 2 GG844_09955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_09970 PF00155 Aminotransferase class I and II GG844_09980 PF01966 HD domain GG844_09980 PF00672 HAMP domain GG844_09985 PF08543 Phosphomethylpyrimidine kinase GG844_09985 PF02581 Thiamine monophosphate synthase GG844_09990 PF01336 OB-fold nucleic acid binding domain GG844_09990 PF00152 tRNA synthetases class II (D, K and N) GG844_09995 PF00672 HAMP domain GG844_09995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_10000 PF01242 6-pyruvoyl tetrahydropterin synthase GG844_10005 PF03315 Serine dehydratase beta chain GG844_10005 PF03313 Serine dehydratase alpha chain GG844_10010 PF03222 Tryptophan/tyrosine permease family GG844_10015 PF00293 NUDIX domain GG844_10020 PF00425 chorismate binding enzyme GG844_10020 PF04715 Anthranilate synthase component I, N terminal region GG844_10035 PF04317 YcjX-like family, DUF463 GG844_10040 PF05128 Domain of unknown function (DUF697) GG844_10045 PF18024 Helix-turn-helix domain GG844_10045 PF00158 Sigma-54 interaction domain GG844_10050 PF13302 Acetyltransferase (GNAT) domain GG844_10060 PF00892 EamA-like transporter family GG844_10065 PF01168 Alanine racemase, N-terminal domain GG844_10065 PF00842 Alanine racemase, C-terminal domain GG844_10070 PF00672 HAMP domain GG844_10070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_10075 PF00939 Sodium:sulfate symporter transmembrane region GG844_10080 PF00512 His Kinase A (phospho-acceptor) domain GG844_10080 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_10085 PF00158 Sigma-54 interaction domain GG844_10085 PF02954 Bacterial regulatory protein, Fis family GG844_10085 PF00072 Response regulator receiver domain GG844_10090 PF04393 Protein of unknown function (DUF535) GG844_10095 PF06629 MltA-interacting protein MipA GG844_10100 PF00672 HAMP domain GG844_10100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_10100 PF00512 His Kinase A (phospho-acceptor) domain GG844_10105 PF00072 Response regulator receiver domain GG844_10105 PF00486 Transcriptional regulatory protein, C terminal GG844_10125 PF13407 Periplasmic binding protein domain GG844_10130 PF00005 ABC transporter GG844_10135 PF02653 Branched-chain amino acid transport system / permease component GG844_10150 PF01970 Tripartite tricarboxylate transporter TctA family GG844_10165 PF00392 Bacterial regulatory proteins, gntR family GG844_10165 PF07729 FCD domain GG844_10175 PF00285 Citrate synthase, C-terminal domain GG844_10180 PF00330 Aconitase family (aconitate hydratase) GG844_10180 PF00694 Aconitase C-terminal domain GG844_10185 PF04303 PrpF protein GG844_10190 PF16177 Acetyl-coenzyme A synthetase N-terminus GG844_10190 PF00501 AMP-binding enzyme GG844_10190 PF13193 AMP-binding enzyme C-terminal domain GG844_10205 PF07687 Peptidase dimerisation domain GG844_10205 PF01546 Peptidase family M20/M25/M40 GG844_10210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GG844_10215 PF04209 homogentisate 1,2-dioxygenase GG844_10225 PF02798 Glutathione S-transferase, N-terminal domain GG844_10225 PF14497 Glutathione S-transferase, C-terminal domain GG844_10230 PF00072 Response regulator receiver domain GG844_10235 PF01627 Hpt domain GG844_10235 PF00072 Response regulator receiver domain GG844_10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_10235 PF00672 HAMP domain GG844_10235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GG844_10235 PF00512 His Kinase A (phospho-acceptor) domain GG844_10240 PF08534 Redoxin GG844_10240 PF00462 Glutaredoxin GG844_10245 PF00990 Diguanylate cyclase, GGDEF domain GG844_10250 PF10672 S-adenosylmethionine-dependent methyltransferase GG844_10250 PF17785 PUA-like domain GG844_10255 PF00708 Acylphosphatase GG844_10260 PF04358 DsrC like protein GG844_10265 PF01027 Inhibitor of apoptosis-promoting Bax1 GG844_10270 PF00005 ABC transporter GG844_10275 PF00528 Binding-protein-dependent transport system inner membrane component GG844_10280 PF00528 Binding-protein-dependent transport system inner membrane component GG844_10285 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_10290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GG844_10290 PF14824 Sirohaem biosynthesis protein central GG844_10290 PF10414 Sirohaem synthase dimerisation region GG844_10300 PF04055 Radical SAM superfamily GG844_10305 PF06508 Queuosine biosynthesis protein QueC GG844_10325 PF03707 Bacterial signalling protein N terminal repeat GG844_10325 PF00563 EAL domain GG844_10325 PF00990 Diguanylate cyclase, GGDEF domain GG844_10335 PF17158 Membrane-associated sensor, integral membrane domain GG844_10335 PF00990 Diguanylate cyclase, GGDEF domain GG844_10340 PF00012 Hsp70 protein GG844_10345 PF00012 Hsp70 protein GG844_10360 PF03707 Bacterial signalling protein N terminal repeat GG844_10360 PF00990 Diguanylate cyclase, GGDEF domain GG844_10360 PF00563 EAL domain GG844_10385 PF04408 Helicase associated domain (HA2) GG844_10385 PF00270 DEAD/DEAH box helicase GG844_10385 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GG844_10385 PF00271 Helicase conserved C-terminal domain GG844_10385 PF11898 Domain of unknown function (DUF3418) GG844_10395 PF00012 Hsp70 protein GG844_10400 PF03099 Biotin/lipoate A/B protein ligase family GG844_10400 PF10437 Bacterial lipoate protein ligase C-terminus GG844_10410 PF03466 LysR substrate binding domain GG844_10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_10415 PF07690 Major Facilitator Superfamily GG844_10420 PF03441 FAD binding domain of DNA photolyase GG844_10420 PF00875 DNA photolyase GG844_10425 PF00893 Small Multidrug Resistance protein GG844_10430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_10430 PF00672 HAMP domain GG844_10445 PF01627 Hpt domain GG844_10445 PF01584 CheW-like domain GG844_10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_10445 PF02895 Signal transducing histidine kinase, homodimeric domain GG844_10445 PF07194 P2 response regulator binding domain GG844_10450 PF01584 CheW-like domain GG844_10450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_10450 PF01627 Hpt domain GG844_10450 PF00072 Response regulator receiver domain GG844_10455 PF03705 CheR methyltransferase, all-alpha domain GG844_10455 PF01739 CheR methyltransferase, SAM binding domain GG844_10465 PF01339 CheB methylesterase GG844_10465 PF00072 Response regulator receiver domain GG844_10470 PF01584 CheW-like domain GG844_10475 PF17202 Single cache domain 3 GG844_10475 PF00672 HAMP domain GG844_10475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_10480 PF12729 Four helix bundle sensory module for signal transduction GG844_10480 PF00672 HAMP domain GG844_10485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_10485 PF08447 PAS fold GG844_10485 PF13426 PAS domain GG844_10490 PF00270 DEAD/DEAH box helicase GG844_10490 PF00271 Helicase conserved C-terminal domain GG844_10500 PF02321 Outer membrane efflux protein GG844_10505 PF00529 HlyD membrane-fusion protein of T1SS GG844_10505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GG844_10510 PF07690 Major Facilitator Superfamily GG844_10515 PF02743 Cache domain GG844_10515 PF00672 HAMP domain GG844_10515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_10520 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GG844_10525 PF05638 Type VI secretion system effector, Hcp GG844_10530 PF04717 Type VI secretion system, phage-baseplate injector GG844_10530 PF16671 Actin cross-linking domain GG844_10555 PF01810 LysE type translocator GG844_10560 PF01235 Sodium:alanine symporter family GG844_10575 PF13416 Bacterial extracellular solute-binding protein GG844_10580 PF13416 Bacterial extracellular solute-binding protein GG844_10585 PF00528 Binding-protein-dependent transport system inner membrane component GG844_10590 PF00528 Binding-protein-dependent transport system inner membrane component GG844_10595 PF08402 TOBE domain GG844_10595 PF00005 ABC transporter GG844_10615 PF01171 PP-loop family GG844_10620 PF00582 Universal stress protein family GG844_10625 PF13545 Crp-like helix-turn-helix domain GG844_10625 PF00027 Cyclic nucleotide-binding domain GG844_10640 PF00403 Heavy-metal-associated domain GG844_10650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GG844_10650 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GG844_10665 PF00115 Cytochrome C and Quinol oxidase polypeptide I GG844_10680 PF00072 Response regulator receiver domain GG844_10680 PF09308 LuxQ, periplasmic GG844_10680 PF00512 His Kinase A (phospho-acceptor) domain GG844_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_10685 PF03412 Peptidase C39 family GG844_10685 PF00664 ABC transporter transmembrane region GG844_10685 PF00005 ABC transporter GG844_10700 PF07634 RtxA repeat GG844_10700 PF11713 Peptidase C80 family GG844_10700 PF16671 Actin cross-linking domain GG844_10700 PF12146 Serine aminopeptidase, S33 GG844_10700 PF11647 Membrane Localization Domain GG844_10705 PF01376 Heat-labile enterotoxin beta chain GG844_10715 PF05707 Zonular occludens toxin (Zot) GG844_10720 PF10734 Protein of unknown function (DUF2523) GG844_10725 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII GG844_10745 PF01381 Helix-turn-helix GG844_10760 PF01381 Helix-turn-helix GG844_10865 PF17414 MatP C-terminal ribbon-helix-helix domain GG844_10865 PF06303 MatP N-terminal domain GG844_10870 PF13654 AAA domain GG844_10870 PF05362 Lon protease (S16) C-terminal proteolytic domain GG844_10875 PF07977 FabA-like domain GG844_10880 PF04957 Ribosome modulation factor GG844_10900 PF01170 Putative RNA methylase family UPF0020 GG844_10900 PF02926 THUMP domain GG844_10900 PF10672 S-adenosylmethionine-dependent methyltransferase GG844_10905 PF07126 Cell-division protein ZapC GG844_10910 PF01180 Dihydroorotate dehydrogenase GG844_10925 PF11940 Domain of unknown function (DUF3458) Ig-like fold GG844_10925 PF01433 Peptidase family M1 domain GG844_10925 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GG844_10935 PF17804 Tail specific protease N-terminal domain GG844_10935 PF11818 C-terminal domain of tail specific protease (DUF3340) GG844_10935 PF00595 PDZ domain GG844_10935 PF03572 Peptidase family S41 GG844_10940 PF17516 ProQ C-terminal domain GG844_10940 PF04352 ProQ/FINO family GG844_10945 PF13185 GAF domain GG844_10950 PF00664 ABC transporter transmembrane region GG844_10950 PF00005 ABC transporter GG844_10955 PF04403 Paraquat-inducible protein A GG844_10960 PF02470 MlaD protein GG844_10965 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GG844_10965 PF01189 16S rRNA methyltransferase RsmB/F GG844_10965 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GG844_10970 PF13509 S1 domain GG844_10970 PF17783 CvfB-like winged helix domain GG844_10985 PF00793 DAHP synthetase I family GG844_10990 PF04461 Protein of unknown function (DUF520) GG844_10995 PF02146 Sir2 family GG844_11010 PF13247 4Fe-4S dicluster domain GG844_11015 PF01568 Molydopterin dinucleotide binding domain GG844_11015 PF00384 Molybdopterin oxidoreductase GG844_11015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GG844_11025 PF02613 Nitrate reductase delta subunit GG844_11045 PF02634 FdhD/NarQ family GG844_11050 PF12848 ABC transporter GG844_11050 PF00005 ABC transporter GG844_11055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_11055 PF00512 His Kinase A (phospho-acceptor) domain GG844_11055 PF00989 PAS fold GG844_11060 PF00072 Response regulator receiver domain GG844_11060 PF02954 Bacterial regulatory protein, Fis family GG844_11060 PF00158 Sigma-54 interaction domain GG844_11065 PF12849 PBP superfamily domain GG844_11070 PF00528 Binding-protein-dependent transport system inner membrane component GG844_11075 PF00005 ABC transporter GG844_11075 PF08402 TOBE domain GG844_11080 PF12804 MobA-like NTP transferase domain GG844_11085 PF00994 Probable molybdopterin binding domain GG844_11085 PF03453 MoeA N-terminal region (domain I and II) GG844_11085 PF03454 MoeA C-terminal region (domain IV) GG844_11105 PF00480 ROK family GG844_11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_11120 PF02743 Cache domain GG844_11120 PF00672 HAMP domain GG844_11125 PF00877 NlpC/P60 family GG844_11145 PF01554 MatE GG844_11155 PF14743 DNA ligase OB-like domain GG844_11155 PF01068 ATP dependent DNA ligase domain GG844_11165 PF03544 Gram-negative bacterial TonB protein C-terminal GG844_11170 PF02472 Biopolymer transport protein ExbD/TolR GG844_11175 PF01618 MotA/TolQ/ExbB proton channel family GG844_11180 PF01618 MotA/TolQ/ExbB proton channel family GG844_11190 PF13416 Bacterial extracellular solute-binding protein GG844_11195 PF00528 Binding-protein-dependent transport system inner membrane component GG844_11200 PF00528 Binding-protein-dependent transport system inner membrane component GG844_11205 PF17912 MalK OB fold domain GG844_11205 PF00005 ABC transporter GG844_11210 PF08220 DeoR-like helix-turn-helix domain GG844_11210 PF00455 DeoR C terminal sensor domain GG844_11215 PF03009 Glycerophosphoryl diester phosphodiesterase family GG844_11220 PF04074 YhcH/YjgK/YiaL GG844_11225 PF01042 Endoribonuclease L-PSP GG844_11230 PF00356 Bacterial regulatory proteins, lacI family GG844_11235 PF00232 Glycosyl hydrolase family 1 GG844_11240 PF00141 Peroxidase GG844_11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_11245 PF03466 LysR substrate binding domain GG844_11255 PF00529 HlyD membrane-fusion protein of T1SS GG844_11265 PF02687 FtsX-like permease family GG844_11265 PF12704 MacB-like periplasmic core domain GG844_11265 PF00005 ABC transporter GG844_11270 PF12704 MacB-like periplasmic core domain GG844_11270 PF00005 ABC transporter GG844_11270 PF02687 FtsX-like permease family GG844_11275 PF02687 FtsX-like permease family GG844_11275 PF12704 MacB-like periplasmic core domain GG844_11275 PF00005 ABC transporter GG844_11280 PF02322 Cytochrome bd terminal oxidase subunit II GG844_11285 PF01654 Cytochrome bd terminal oxidase subunit I GG844_11295 PF10415 Fumarase C C-terminus GG844_11295 PF00206 Lyase GG844_11325 PF13193 AMP-binding enzyme C-terminal domain GG844_11325 PF00501 AMP-binding enzyme GG844_11330 PF03466 LysR substrate binding domain GG844_11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_11335 PF00361 Proton-conducting membrane transporter GG844_11335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GG844_11340 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GG844_11345 PF00080 Copper/zinc superoxide dismutase (SODC) GG844_11355 PF00199 Catalase GG844_11355 PF06628 Catalase-related immune-responsive GG844_11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_11365 PF03466 LysR substrate binding domain GG844_11370 PF03306 Alpha-acetolactate decarboxylase GG844_11375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GG844_11375 PF00205 Thiamine pyrophosphate enzyme, central domain GG844_11375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GG844_11385 PF00990 Diguanylate cyclase, GGDEF domain GG844_11385 PF00563 EAL domain GG844_11385 PF17154 Gammaproteobacterial periplasmic sensor domain GG844_11385 PF00672 HAMP domain GG844_11390 PF00990 Diguanylate cyclase, GGDEF domain GG844_11395 PF01263 Aldose 1-epimerase GG844_11400 PF00288 GHMP kinases N terminal domain GG844_11400 PF10509 Galactokinase galactose-binding signature GG844_11400 PF08544 GHMP kinases C terminal GG844_11405 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GG844_11405 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GG844_11410 PF07690 Major Facilitator Superfamily GG844_11450 PF01584 CheW-like domain GG844_11450 PF00072 Response regulator receiver domain GG844_11460 PF00072 Response regulator receiver domain GG844_11460 PF12431 Transcriptional regulator GG844_11465 PF00989 PAS fold GG844_11465 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GG844_11465 PF17203 Single cache domain 3 GG844_11465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_11480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GG844_11500 PF04204 Homoserine O-succinyltransferase GG844_11520 PF01797 Transposase IS200 like GG844_11530 PF01863 Protein of unknown function DUF45 GG844_11540 PF03466 LysR substrate binding domain GG844_11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_11560 PF02321 Outer membrane efflux protein GG844_11565 PF05736 OprF membrane domain GG844_11565 PF00691 OmpA family GG844_11575 PF16653 Saccharopine dehydrogenase C-terminal domain GG844_11575 PF03435 Saccharopine dehydrogenase NADP binding domain GG844_11580 PF00202 Aminotransferase class-III GG844_11585 PF06965 Na+/H+ antiporter 1 GG844_11600 PF00005 ABC transporter GG844_11605 PF01554 MatE GG844_11610 PF11066 Protein of unknown function (DUF2867) GG844_11610 PF13460 NAD(P)H-binding GG844_11620 PF07690 Major Facilitator Superfamily GG844_11625 PF00849 RNA pseudouridylate synthase GG844_11625 PF01479 S4 domain GG844_11630 PF04851 Type III restriction enzyme, res subunit GG844_11630 PF00271 Helicase conserved C-terminal domain GG844_11640 PF00486 Transcriptional regulatory protein, C terminal GG844_11640 PF00072 Response regulator receiver domain GG844_11650 PF01386 Ribosomal L25p family GG844_11655 PF01590 GAF domain GG844_11655 PF00990 Diguanylate cyclase, GGDEF domain GG844_11655 PF00360 Phytochrome region GG844_11655 PF00563 EAL domain GG844_11665 PF00672 HAMP domain GG844_11665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_11665 PF12729 Four helix bundle sensory module for signal transduction GG844_11685 PF12793 Sugar transport-related sRNA regulator N-term GG844_11685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GG844_11705 PF00563 EAL domain GG844_11705 PF00990 Diguanylate cyclase, GGDEF domain GG844_11705 PF03707 Bacterial signalling protein N terminal repeat GG844_11710 PF00072 Response regulator receiver domain GG844_11710 PF00512 His Kinase A (phospho-acceptor) domain GG844_11710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_11710 PF09308 LuxQ, periplasmic GG844_11715 PF00571 CBS domain GG844_11715 PF03448 MgtE intracellular N domain GG844_11715 PF01769 Divalent cation transporter GG844_11725 PF03222 Tryptophan/tyrosine permease family GG844_11730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GG844_11735 PF00005 ABC transporter GG844_11750 PF06945 Protein of unknown function (DUF1289) GG844_11760 PF13416 Bacterial extracellular solute-binding protein GG844_11765 PF00528 Binding-protein-dependent transport system inner membrane component GG844_11770 PF00005 ABC transporter GG844_11775 PF01066 CDP-alcohol phosphatidyltransferase GG844_11780 PF00849 RNA pseudouridylate synthase GG844_11785 PF00209 Sodium:neurotransmitter symporter family GG844_11790 PF13396 Phospholipase_D-nuclease N-terminal GG844_11790 PF13091 PLD-like domain GG844_11795 PF01053 Cys/Met metabolism PLP-dependent enzyme GG844_11800 PF03352 Methyladenine glycosylase GG844_11805 PF00873 AcrB/AcrD/AcrF family GG844_11810 PF13533 Biotin-lipoyl like GG844_11815 PF00529 HlyD membrane-fusion protein of T1SS GG844_11815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GG844_11830 PF04012 PspA/IM30 family GG844_11835 PF02954 Bacterial regulatory protein, Fis family GG844_11835 PF00158 Sigma-54 interaction domain GG844_11840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GG844_11845 PF00528 Binding-protein-dependent transport system inner membrane component GG844_11850 PF12911 N-terminal TM domain of oligopeptide transport permease C GG844_11850 PF00528 Binding-protein-dependent transport system inner membrane component GG844_11855 PF00005 ABC transporter GG844_11855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_11860 PF00005 ABC transporter GG844_11875 PF01368 DHH family GG844_11875 PF02833 DHHA2 domain GG844_11895 PF00384 Molybdopterin oxidoreductase GG844_11895 PF18364 Molybdopterin oxidoreductase N-terminal domain GG844_11895 PF01568 Molydopterin dinucleotide binding domain GG844_11900 PF03264 NapC/NirT cytochrome c family, N-terminal region GG844_11905 PF06796 Periplasmic nitrate reductase protein NapE GG844_11910 PF01226 Formate/nitrite transporter GG844_11920 PF01370 NAD dependent epimerase/dehydratase family GG844_11925 PF02698 DUF218 domain GG844_11935 PF04279 Intracellular septation protein A GG844_11940 PF03061 Thioesterase superfamily GG844_11945 PF03795 YCII-related domain GG844_11955 PF01717 Cobalamin-independent synthase, Catalytic domain GG844_11955 PF08267 Cobalamin-independent synthase, N-terminal domain GG844_11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_11960 PF03466 LysR substrate binding domain GG844_11975 PF05193 Peptidase M16 inactive domain GG844_11975 PF00675 Insulinase (Peptidase family M16) GG844_11980 PF00563 EAL domain GG844_11980 PF08447 PAS fold GG844_11980 PF00990 Diguanylate cyclase, GGDEF domain GG844_11980 PF08448 PAS fold GG844_11985 PF08497 Radical SAM N-terminal GG844_11985 PF04055 Radical SAM superfamily GG844_11985 PF11842 Domain of unknown function (DUF3362) GG844_11990 PF01810 LysE type translocator GG844_12000 PF16330 MukB hinge domain GG844_12000 PF04310 MukB N-terminal GG844_12005 PF04288 MukE-like family GG844_12010 PF17192 MukF middle domain GG844_12010 PF17193 MukF C-terminal domain GG844_12010 PF03882 MukF winged-helix domain GG844_12020 PF02698 DUF218 domain GG844_12025 PF00072 Response regulator receiver domain GG844_12025 PF00486 Transcriptional regulatory protein, C terminal GG844_12030 PF02613 Nitrate reductase delta subunit GG844_12035 PF00356 Bacterial regulatory proteins, lacI family GG844_12040 PF04993 TfoX N-terminal domain GG844_12040 PF04994 TfoX C-terminal domain GG844_12060 PF08323 Starch synthase catalytic domain GG844_12060 PF00534 Glycosyl transferases group 1 GG844_12065 PF00483 Nucleotidyl transferase GG844_12070 PF01396 Topoisomerase DNA binding C4 zinc finger GG844_12070 PF08272 Topoisomerase I zinc-ribbon-like GG844_12070 PF01131 DNA topoisomerase GG844_12070 PF01751 Toprim domain GG844_12075 PF10692 Protein of unknown function (DUF2498) GG844_12080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GG844_12090 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GG844_12095 PF04377 Arginine-tRNA-protein transferase, C terminus GG844_12095 PF04376 Arginine-tRNA-protein transferase, N terminus GG844_12100 PF01176 Translation initiation factor 1A / IF-1 GG844_12105 PF12241 Trans-2-enoyl-CoA reductase catalytic region GG844_12105 PF07055 Enoyl reductase FAD binding domain GG844_12105 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GG844_12110 PF09317 Domain of unknown function (DUF1974) GG844_12110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GG844_12110 PF02770 Acyl-CoA dehydrogenase, middle domain GG844_12110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GG844_12115 PF00440 Bacterial regulatory proteins, tetR family GG844_12115 PF16295 Tetracyclin repressor-like, C-terminal domain GG844_12125 PF07383 Protein of unknown function (DUF1496) GG844_12130 PF00171 Aldehyde dehydrogenase family GG844_12135 PF00440 Bacterial regulatory proteins, tetR family GG844_12135 PF08362 YcdC-like protein, C-terminal region GG844_12155 PF00924 Mechanosensitive ion channel GG844_12155 PF05552 Conserved TM helix GG844_12160 PF04403 Paraquat-inducible protein A GG844_12165 PF02470 MlaD protein GG844_12175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GG844_12180 PF00873 AcrB/AcrD/AcrF family GG844_12190 PF00589 Phage integrase family GG844_12190 PF13356 Arm DNA-binding domain GG844_12195 PF00589 Phage integrase family GG844_12195 PF13356 Arm DNA-binding domain GG844_12200 PF00176 SNF2 family N-terminal domain GG844_12200 PF00271 Helicase conserved C-terminal domain GG844_12200 PF12419 SNF2 Helicase protein GG844_12220 PF11867 Domain of unknown function (DUF3387) GG844_12220 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GG844_12220 PF18766 SWI2/SNF2 ATPase GG844_12240 PF02384 N-6 DNA Methylase GG844_12260 PF07646 Kelch motif GG844_12265 PF01344 Kelch motif GG844_12270 PF01380 SIS domain GG844_12270 PF01418 Helix-turn-helix domain, rpiR family GG844_12275 PF00701 Dihydrodipicolinate synthetase family GG844_12280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GG844_12285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GG844_12290 PF03480 Bacterial extracellular solute-binding protein, family 7 GG844_12300 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase GG844_12305 PF00480 ROK family GG844_12310 PF01979 Amidohydrolase family GG844_12315 PF13088 BNR repeat-like domain GG844_12315 PF09264 Vibrio cholerae sialidase, lectin insertion GG844_12325 PF04002 RadC-like JAB domain GG844_12380 PF00005 ABC transporter GG844_12460 PF03441 FAD binding domain of DNA photolyase GG844_12460 PF00875 DNA photolyase GG844_12470 PF09905 DNA-binding protein VF530 GG844_12475 PF00158 Sigma-54 interaction domain GG844_12475 PF02954 Bacterial regulatory protein, Fis family GG844_12475 PF01590 GAF domain GG844_12480 PF00171 Aldehyde dehydrogenase family GG844_12500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GG844_12510 PF12833 Helix-turn-helix domain GG844_12515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GG844_12515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GG844_12515 PF02378 Phosphotransferase system, EIIC GG844_12520 PF01238 Phosphomannose isomerase type I GG844_12525 PF06610 L-alanine exporter GG844_12530 PF00512 His Kinase A (phospho-acceptor) domain GG844_12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_12530 PF00072 Response regulator receiver domain GG844_12530 PF09308 LuxQ, periplasmic GG844_12540 PF02445 Quinolinate synthetase A protein GG844_12550 PF00691 OmpA family GG844_12555 PF07676 WD40-like Beta Propeller Repeat GG844_12555 PF04052 TolB amino-terminal domain GG844_12565 PF02472 Biopolymer transport protein ExbD/TolR GG844_12570 PF01618 MotA/TolQ/ExbB proton channel family GG844_12580 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) GG844_12585 PF08173 Membrane bound YbgT-like protein GG844_12590 PF02322 Cytochrome bd terminal oxidase subunit II GG844_12595 PF01654 Cytochrome bd terminal oxidase subunit I GG844_12600 PF05491 RuvB C-terminal winged helix domain GG844_12600 PF05496 Holliday junction DNA helicase RuvB P-loop domain GG844_12600 PF17864 RuvB AAA lid domain GG844_12605 PF01330 RuvA N terminal domain GG844_12605 PF07499 RuvA, C-terminal domain GG844_12610 PF02075 Crossover junction endodeoxyribonuclease RuvC GG844_12615 PF01406 tRNA synthetases class I (C) catalytic domain GG844_12615 PF09190 DALR domain GG844_12620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GG844_12625 PF00149 Calcineurin-like phosphoesterase GG844_12630 PF00563 EAL domain GG844_12630 PF08668 HDOD domain GG844_12635 PF02810 SEC-C motif GG844_12640 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GG844_12645 PF13609 Gram-negative porin GG844_12650 PF06733 DEAD_2 GG844_12650 PF13307 Helicase C-terminal domain GG844_12655 PF01925 Sulfite exporter TauE/SafE GG844_12660 PF07445 Primosomal replication protein priC GG844_12665 PF10689 Protein of unknown function (DUF2496) GG844_12670 PF00672 HAMP domain GG844_12670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_12675 PF03372 Endonuclease/Exonuclease/phosphatase family GG844_12680 PF00528 Binding-protein-dependent transport system inner membrane component GG844_12685 PF00528 Binding-protein-dependent transport system inner membrane component GG844_12690 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_12695 PF00005 ABC transporter GG844_12705 PF02901 Pyruvate formate lyase-like GG844_12705 PF01228 Glycine radical GG844_12715 PF00672 HAMP domain GG844_12715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_12715 PF12729 Four helix bundle sensory module for signal transduction GG844_12720 PF04055 Radical SAM superfamily GG844_12730 PF03887 YfbU domain GG844_12735 PF06798 PrkA serine protein kinase C-terminal domain GG844_12735 PF08298 PrkA AAA domain GG844_12740 PF04285 Protein of unknown function (DUF444) GG844_12745 PF04293 SpoVR like protein GG844_12750 PF02348 Cytidylyltransferase GG844_12755 PF03966 Trm112p-like protein GG844_12760 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GG844_12765 PF00005 ABC transporter GG844_12765 PF00664 ABC transporter transmembrane region GG844_12770 PF03772 Competence protein GG844_12770 PF13567 Domain of unknown function (DUF4131) GG844_12770 PF00753 Metallo-beta-lactamase superfamily GG844_12785 PF02687 FtsX-like permease family GG844_12785 PF12704 MacB-like periplasmic core domain GG844_12790 PF00005 ABC transporter GG844_12795 PF12704 MacB-like periplasmic core domain GG844_12795 PF02687 FtsX-like permease family GG844_12805 PF00271 Helicase conserved C-terminal domain GG844_12805 PF17757 UvrB interaction domain GG844_12805 PF03461 TRCF domain GG844_12805 PF00270 DEAD/DEAH box helicase GG844_12805 PF02559 CarD-like/TRCF domain GG844_12815 PF16458 Beta-prism lectin GG844_12815 PF12563 Hemolytic toxin N terminal GG844_12815 PF07968 Leukocidin/Hemolysin toxin family GG844_12825 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_12830 PF05728 Uncharacterised protein family (UPF0227) GG844_12840 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GG844_12840 PF13036 Peptidoglycan-synthase activator LpoB GG844_12855 PF01230 HIT domain GG844_12860 PF00672 HAMP domain GG844_12860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_12870 PF00392 Bacterial regulatory proteins, gntR family GG844_12870 PF07840 FadR C-terminal domain GG844_12875 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GG844_12880 PF02600 Disulfide bond formation protein DsbB GG844_12885 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GG844_12885 PF17854 FtsK alpha domain GG844_12885 PF09397 Ftsk gamma domain GG844_12885 PF01580 FtsK/SpoIIIE family GG844_12895 PF01037 Lrp/AsnC ligand binding domain GG844_12900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GG844_12900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GG844_12910 PF03466 LysR substrate binding domain GG844_12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_12920 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GG844_12925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GG844_12930 PF18073 Rubredoxin metal binding domain GG844_12935 PF06305 Lipopolysaccharide assembly protein A domain GG844_12940 PF00216 Bacterial DNA-binding protein GG844_12945 PF00575 S1 RNA binding domain GG844_12950 PF02224 Cytidylate kinase GG844_12960 PF13145 PPIC-type PPIASE domain GG844_12965 PF00216 Bacterial DNA-binding protein GG844_12970 PF00004 ATPase family associated with various cellular activities (AAA) GG844_12970 PF02190 ATP-dependent protease La (LON) substrate-binding domain GG844_12970 PF05362 Lon protease (S16) C-terminal proteolytic domain GG844_12975 PF06689 ClpX C4-type zinc finger GG844_12975 PF07724 AAA domain (Cdc48 subfamily) GG844_12975 PF10431 C-terminal, D2-small domain, of ClpB protein GG844_12980 PF00574 Clp protease GG844_12985 PF05697 Bacterial trigger factor protein (TF) GG844_12985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GG844_12985 PF05698 Bacterial trigger factor protein (TF) C-terminus GG844_12995 PF00512 His Kinase A (phospho-acceptor) domain GG844_12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_12995 PF02743 Cache domain GG844_13000 PF00158 Sigma-54 interaction domain GG844_13000 PF02954 Bacterial regulatory protein, Fis family GG844_13000 PF00072 Response regulator receiver domain GG844_13005 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GG844_13010 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GG844_13015 PF03480 Bacterial extracellular solute-binding protein, family 7 GG844_13020 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GG844_13035 PF00990 Diguanylate cyclase, GGDEF domain GG844_13035 PF03707 Bacterial signalling protein N terminal repeat GG844_13035 PF00563 EAL domain GG844_13035 PF13188 PAS domain GG844_13080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GG844_13080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GG844_13085 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GG844_13090 PF01494 FAD binding domain GG844_13095 PF03466 LysR substrate binding domain GG844_13095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_13110 PF00384 Molybdopterin oxidoreductase GG844_13110 PF01568 Molydopterin dinucleotide binding domain GG844_13110 PF18364 Molybdopterin oxidoreductase N-terminal domain GG844_13115 PF03264 NapC/NirT cytochrome c family, N-terminal region GG844_13120 PF00704 Glycosyl hydrolases family 18 GG844_13125 PF07670 Nucleoside recognition GG844_13125 PF07662 Na+ dependent nucleoside transporter C-terminus GG844_13125 PF01773 Na+ dependent nucleoside transporter N-terminus GG844_13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_13130 PF03466 LysR substrate binding domain GG844_13135 PF13406 Transglycosylase SLT domain GG844_13140 PF05166 YcgL domain GG844_13145 PF03775 Septum formation inhibitor MinC, C-terminal domain GG844_13145 PF05209 Septum formation inhibitor MinC, N-terminal domain GG844_13150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GG844_13155 PF03776 Septum formation topological specificity factor MinE GG844_13160 PF04170 NlpE N-terminal domain GG844_13180 PF07690 Major Facilitator Superfamily GG844_13185 PF12729 Four helix bundle sensory module for signal transduction GG844_13185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_13185 PF00672 HAMP domain GG844_13190 PF07883 Cupin domain GG844_13190 PF01381 Helix-turn-helix GG844_13195 PF03594 Benzoate membrane transport protein GG844_13200 PF13193 AMP-binding enzyme C-terminal domain GG844_13200 PF00501 AMP-binding enzyme GG844_13205 PF13378 Enolase C-terminal domain-like GG844_13210 PF00378 Enoyl-CoA hydratase/isomerase GG844_13215 PF12697 Alpha/beta hydrolase family GG844_13220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GG844_13220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GG844_13220 PF16582 Middle domain of thiamine pyrophosphate GG844_13225 PF00425 chorismate binding enzyme GG844_13230 PF00155 Aminotransferase class I and II GG844_13240 PF01966 HD domain GG844_13240 PF13286 Phosphohydrolase-associated domain GG844_13260 PF00570 HRDC domain GG844_13260 PF01612 3'-5' exonuclease GG844_13265 PF13193 AMP-binding enzyme C-terminal domain GG844_13265 PF00501 AMP-binding enzyme GG844_13270 PF00561 alpha/beta hydrolase fold GG844_13285 PF00814 Glycoprotease family GG844_13290 PF13307 Helicase C-terminal domain GG844_13290 PF04851 Type III restriction enzyme, res subunit GG844_13300 PF00551 Formyl transferase GG844_13300 PF01842 ACT domain GG844_13305 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_13305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GG844_13310 PF01343 Peptidase family S49 GG844_13315 PF00710 Asparaginase, N-terminal GG844_13315 PF17763 Glutaminase/Asparaginase C-terminal domain GG844_13320 PF07023 Protein of unknown function (DUF1315) GG844_13330 PF01641 SelR domain GG844_13335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GG844_13335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GG844_13340 PF01263 Aldose 1-epimerase GG844_13350 PF13847 Methyltransferase domain GG844_13365 PF01584 CheW-like domain GG844_13365 PF00072 Response regulator receiver domain GG844_13370 PF00480 ROK family GG844_13375 PF00224 Pyruvate kinase, barrel domain GG844_13375 PF02887 Pyruvate kinase, alpha/beta domain GG844_13380 PF01734 Patatin-like phospholipase GG844_13395 PF00209 Sodium:neurotransmitter symporter family GG844_13405 PF02378 Phosphotransferase system, EIIC GG844_13405 PF00367 phosphotransferase system, EIIB GG844_13410 PF01026 TatD related DNase GG844_13415 PF09115 DNA polymerase III, delta subunit, C terminal GG844_13420 PF02223 Thymidylate kinase GG844_13425 PF02618 YceG-like family GG844_13430 PF01063 Amino-transferase class IV GG844_13435 PF02801 Beta-ketoacyl synthase, C-terminal domain GG844_13435 PF00109 Beta-ketoacyl synthase, N-terminal domain GG844_13440 PF00550 Phosphopantetheine attachment site GG844_13450 PF00698 Acyl transferase domain GG844_13455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GG844_13455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GG844_13460 PF02504 Fatty acid synthesis protein GG844_13465 PF01783 Ribosomal L32p protein family GG844_13470 PF02620 Large ribosomal RNA subunit accumulation protein YceD GG844_13475 PF02545 Maf-like protein GG844_13480 PF00849 RNA pseudouridylate synthase GG844_13480 PF01479 S4 domain GG844_13490 PF01740 STAS domain GG844_13490 PF00916 Sulfate permease family GG844_13500 PF00465 Iron-containing alcohol dehydrogenase GG844_13500 PF00171 Aldehyde dehydrogenase family GG844_13505 PF01914 MarC family integral membrane protein GG844_13510 PF02774 Semialdehyde dehydrogenase, dimerisation domain GG844_13510 PF01118 Semialdehyde dehydrogenase, NAD binding domain GG844_13515 PF03553 Na+/H+ antiporter family GG844_13525 PF04245 37-kD nucleoid-associated bacterial protein GG844_13530 PF07208 Protein of unknown function (DUF1414) GG844_13535 PF11893 Domain of unknown function (DUF3413) GG844_13535 PF00884 Sulfatase GG844_13550 PF00850 Histone deacetylase domain GG844_13555 PF01751 Toprim domain GG844_13555 PF01131 DNA topoisomerase GG844_13560 PF00462 Glutaredoxin GG844_13565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GG844_13565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GG844_13580 PF04333 MlaA lipoprotein GG844_13590 PF03918 Cytochrome C biogenesis protein GG844_13595 PF08534 Redoxin GG844_13600 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GG844_13600 PF01578 Cytochrome C assembly protein GG844_13605 PF03100 CcmE GG844_13610 PF04995 Heme exporter protein D (CcmD) GG844_13615 PF01578 Cytochrome C assembly protein GG844_13620 PF03379 CcmB protein GG844_13625 PF00005 ABC transporter GG844_13635 PF01584 CheW-like domain GG844_13645 PF13614 AAA domain GG844_13650 PF01339 CheB methylesterase GG844_13650 PF00072 Response regulator receiver domain GG844_13655 PF01627 Hpt domain GG844_13655 PF07194 P2 response regulator binding domain GG844_13655 PF01584 CheW-like domain GG844_13655 PF02895 Signal transducing histidine kinase, homodimeric domain GG844_13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_13660 PF04344 Chemotaxis phosphatase, CheZ GG844_13665 PF00072 Response regulator receiver domain GG844_13670 PF04542 Sigma-70 region 2 GG844_13670 PF04539 Sigma-70 region 3 GG844_13670 PF04545 Sigma-70, region 4 GG844_13675 PF10609 NUBPL iron-transfer P-loop NTPase GG844_13680 PF00448 SRP54-type protein, GTPase domain GG844_13685 PF00771 FHIPEP family GG844_13690 PF00300 Histidine phosphatase superfamily (branch 1) GG844_13695 PF00675 Insulinase (Peptidase family M16) GG844_13695 PF05193 Peptidase M16 inactive domain GG844_13705 PF05746 DALR anticodon binding domain GG844_13705 PF03485 Arginyl tRNA synthetase N terminal domain GG844_13705 PF00750 tRNA synthetases class I (R) GG844_13720 PF02421 Ferrous iron transport protein B GG844_13720 PF07664 Ferrous iron transport protein B C terminus GG844_13720 PF07670 Nucleoside recognition GG844_13725 PF04023 FeoA domain GG844_13730 PF02311 AraC-like ligand binding domain GG844_13730 PF12833 Helix-turn-helix domain GG844_13735 PF01297 Zinc-uptake complex component A periplasmic GG844_13740 PF00005 ABC transporter GG844_13745 PF00950 ABC 3 transport family GG844_13750 PF00549 CoA-ligase GG844_13750 PF02629 CoA binding domain GG844_13755 PF08442 ATP-grasp domain GG844_13755 PF00549 CoA-ligase GG844_13760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GG844_13760 PF00364 Biotin-requiring enzyme GG844_13760 PF02817 e3 binding domain GG844_13765 PF16870 2-oxoglutarate dehydrogenase C-terminal GG844_13765 PF02779 Transketolase, pyrimidine binding domain GG844_13765 PF16078 2-oxoglutarate dehydrogenase N-terminus GG844_13765 PF00676 Dehydrogenase E1 component GG844_13770 PF13085 2Fe-2S iron-sulfur cluster binding domain GG844_13775 PF00890 FAD binding domain GG844_13775 PF02910 Fumarate reductase flavoprotein C-term GG844_13780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GG844_13785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GG844_13790 PF00285 Citrate synthase, C-terminal domain GG844_13795 PF01784 NIF3 (NGG1p interacting factor 3) GG844_13805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GG844_13805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GG844_13805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GG844_13805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GG844_13810 PF03925 SeqA protein C-terminal domain GG844_13810 PF17206 SeqA protein N-terminal domain GG844_13815 PF12697 Alpha/beta hydrolase family GG844_13825 PF00258 Flavodoxin GG844_13830 PF04172 LrgB-like family GG844_13835 PF03788 LrgA family GG844_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_13840 PF03466 LysR substrate binding domain GG844_13850 PF01475 Ferric uptake regulator family GG844_13855 PF01118 Semialdehyde dehydrogenase, NAD binding domain GG844_13855 PF02774 Semialdehyde dehydrogenase, dimerisation domain GG844_13860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GG844_13860 PF11890 Domain of unknown function (DUF3410) GG844_13860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GG844_13865 PF00109 Beta-ketoacyl synthase, N-terminal domain GG844_13865 PF02801 Beta-ketoacyl synthase, C-terminal domain GG844_13870 PF01266 FAD dependent oxidoreductase GG844_13870 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GG844_13875 PF03358 NADPH-dependent FMN reductase GG844_13880 PF08891 YfcL protein GG844_13885 PF04315 Elongation factor P hydroxylase GG844_13890 PF03458 UPF0126 domain GG844_13895 PF01264 Chorismate synthase GG844_13900 PF05175 Methyltransferase small domain GG844_13905 PF01713 Smr domain GG844_13910 PF01312 FlhB HrpN YscU SpaS Family GG844_13915 PF01311 Bacterial export proteins, family 1 GG844_13920 PF01313 Bacterial export proteins, family 3 GG844_13925 PF00813 FliP family GG844_13930 PF04347 Flagellar biosynthesis protein, FliO GG844_13935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GG844_13940 PF02154 Flagellar motor switch protein FliM GG844_13940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GG844_13945 PF03748 Flagellar basal body-associated protein FliL GG844_13965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GG844_13965 PF18269 T3SS EscN ATPase C-terminal domain GG844_13970 PF02108 Flagellar assembly protein FliH GG844_13975 PF14841 FliG middle domain GG844_13975 PF14842 FliG N-terminal domain GG844_13975 PF01706 FliG C-terminal domain GG844_13980 PF01514 Secretory protein of YscJ/FliF family GG844_13980 PF08345 Flagellar M-ring protein C-terminal GG844_13985 PF02049 Flagellar hook-basal body complex protein FliE GG844_13990 PF02954 Bacterial regulatory protein, Fis family GG844_13990 PF00158 Sigma-54 interaction domain GG844_13990 PF00072 Response regulator receiver domain GG844_13995 PF00989 PAS fold GG844_13995 PF13426 PAS domain GG844_13995 PF13493 Domain of unknown function (DUF4118) GG844_13995 PF08447 PAS fold GG844_13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_13995 PF00512 His Kinase A (phospho-acceptor) domain GG844_14000 PF00158 Sigma-54 interaction domain GG844_14000 PF00072 Response regulator receiver domain GG844_14000 PF02954 Bacterial regulatory protein, Fis family GG844_14005 PF02561 Flagellar protein FliS GG844_14015 PF07196 Flagellin hook IN motif GG844_14015 PF07195 Flagellar hook-associated protein 2 C-terminus GG844_14015 PF02465 Flagellar hook-associated protein 2 N-terminus GG844_14020 PF03646 FlaG protein GG844_14025 PF00700 Bacterial flagellin C-terminal helical region GG844_14025 PF07196 Flagellin hook IN motif GG844_14025 PF00669 Bacterial flagellin N-terminal helical region GG844_14030 PF00700 Bacterial flagellin C-terminal helical region GG844_14030 PF07196 Flagellin hook IN motif GG844_14030 PF00669 Bacterial flagellin N-terminal helical region GG844_14035 PF00669 Bacterial flagellin N-terminal helical region GG844_14035 PF00700 Bacterial flagellin C-terminal helical region GG844_14035 PF07196 Flagellin hook IN motif GG844_14040 PF04261 Dyp-type peroxidase family GG844_14045 PF11143 Protein of unknown function (DUF2919) GG844_14060 PF03960 ArsC family GG844_14065 PF01546 Peptidase family M20/M25/M40 GG844_14065 PF07687 Peptidase dimerisation domain GG844_14070 PF02557 D-alanyl-D-alanine carboxypeptidase GG844_14080 PF06804 NlpB/DapX lipoprotein GG844_14085 PF00701 Dihydrodipicolinate synthetase family GG844_14095 PF00578 AhpC/TSA family GG844_14100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_14100 PF00672 HAMP domain GG844_14100 PF02743 Cache domain GG844_14105 PF01594 AI-2E family transporter GG844_14115 PF01435 Peptidase family M48 GG844_14115 PF13181 Tetratricopeptide repeat GG844_14120 PF03960 ArsC family GG844_14125 PF03358 NADPH-dependent FMN reductase GG844_14140 PF00860 Permease family GG844_14145 PF04073 Aminoacyl-tRNA editing domain GG844_14150 PF02872 5'-nucleotidase, C-terminal domain GG844_14150 PF00149 Calcineurin-like phosphoesterase GG844_14155 PF00793 DAHP synthetase I family GG844_14160 PF13369 Transglutaminase-like superfamily GG844_14165 PF04247 Invasion gene expression up-regulator, SirB GG844_14170 PF13847 Methyltransferase domain GG844_14170 PF17827 PrmC N-terminal domain GG844_14175 PF03462 PCRF domain GG844_14175 PF00472 RF-1 domain GG844_14180 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GG844_14180 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GG844_14180 PF01488 Shikimate / quinate 5-dehydrogenase GG844_14185 PF03550 Outer membrane lipoprotein LolB GG844_14190 PF08544 GHMP kinases C terminal GG844_14190 PF00288 GHMP kinases N terminal domain GG844_14195 PF14572 Phosphoribosyl synthetase-associated domain GG844_14195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GG844_14200 PF01195 Peptidyl-tRNA hydrolase GG844_14205 PF01926 50S ribosome-binding GTPase GG844_14205 PF06071 Protein of unknown function (DUF933) GG844_14280 PF01797 Transposase IS200 like GG844_14285 PF07196 Flagellin hook IN motif GG844_14285 PF00700 Bacterial flagellin C-terminal helical region GG844_14285 PF00669 Bacterial flagellin N-terminal helical region GG844_14290 PF07196 Flagellin hook IN motif GG844_14290 PF00669 Bacterial flagellin N-terminal helical region GG844_14290 PF00700 Bacterial flagellin C-terminal helical region GG844_14305 PF07196 Flagellin hook IN motif GG844_14305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GG844_14310 PF10135 Rod binding protein GG844_14310 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GG844_14315 PF02119 Flagellar P-ring protein GG844_14320 PF02107 Flagellar L-ring protein GG844_14325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GG844_14325 PF00460 Flagella basal body rod protein GG844_14330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GG844_14330 PF00460 Flagella basal body rod protein GG844_14335 PF07559 Flagellar basal body protein FlaE GG844_14335 PF00460 Flagella basal body rod protein GG844_14335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GG844_14340 PF13860 FlgD Ig-like domain GG844_14340 PF03963 Flagellar hook capping protein - N-terminal region GG844_14340 PF13861 FlgD Tudor-like domain GG844_14345 PF00460 Flagella basal body rod protein GG844_14345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GG844_14350 PF00460 Flagella basal body rod protein GG844_14355 PF03705 CheR methyltransferase, all-alpha domain GG844_14355 PF01739 CheR methyltransferase, SAM binding domain GG844_14360 PF00072 Response regulator receiver domain GG844_14360 PF01584 CheW-like domain GG844_14395 PF00501 AMP-binding enzyme GG844_14395 PF00668 Condensation domain GG844_14395 PF00550 Phosphopantetheine attachment site GG844_14395 PF08242 Methyltransferase domain GG844_14400 PF08021 Siderophore-interacting FAD-binding domain GG844_14400 PF04954 Siderophore-interacting protein GG844_14405 PF07715 TonB-dependent Receptor Plug Domain GG844_14415 PF01389 OmpA-like transmembrane domain GG844_14415 PF00691 OmpA family GG844_14420 PF00749 tRNA synthetases class I (E and Q), catalytic domain GG844_14425 PF00403 Heavy-metal-associated domain GG844_14435 PF03173 Putative carbohydrate binding domain GG844_14435 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GG844_14435 PF02838 Glycosyl hydrolase family 20, domain 2 GG844_14435 PF00728 Glycosyl hydrolase family 20, catalytic domain GG844_14440 PF01963 TraB family GG844_14455 PF01713 Smr domain GG844_14460 PF01479 S4 domain GG844_14460 PF00849 RNA pseudouridylate synthase GG844_14465 PF00990 Diguanylate cyclase, GGDEF domain GG844_14465 PF08448 PAS fold GG844_14475 PF02769 AIR synthase related protein, C-terminal domain GG844_14475 PF00586 AIR synthase related protein, N-terminal domain GG844_14480 PF00551 Formyl transferase GG844_14485 PF13230 Glutamine amidotransferases class-II GG844_14490 PF13580 SIS domain GG844_14495 PF09317 Domain of unknown function (DUF1974) GG844_14495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GG844_14495 PF02770 Acyl-CoA dehydrogenase, middle domain GG844_14495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GG844_14505 PF00929 Exonuclease GG844_14510 PF00075 RNase H GG844_14515 PF08241 Methyltransferase domain GG844_14520 PF00753 Metallo-beta-lactamase superfamily GG844_14520 PF16123 Hydroxyacylglutathione hydrolase C-terminus GG844_14525 PF01464 Transglycosylase SLT domain GG844_14525 PF01476 LysM domain GG844_14530 PF03372 Endonuclease/Exonuclease/phosphatase family GG844_14535 PF00543 Nitrogen regulatory protein P-II GG844_14540 PF05870 Phenolic acid decarboxylase (PAD) GG844_14545 PF00034 Cytochrome c GG844_14550 PF09179 TilS substrate binding domain GG844_14550 PF11734 TilS substrate C-terminal domain GG844_14550 PF01171 PP-loop family GG844_14555 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GG844_14560 PF07733 Bacterial DNA polymerase III alpha NTPase domain GG844_14560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GG844_14560 PF14579 Helix-hairpin-helix motif GG844_14560 PF02811 PHP domain GG844_14560 PF01336 OB-fold nucleic acid binding domain GG844_14565 PF01351 Ribonuclease HII GG844_14570 PF02684 Lipid-A-disaccharide synthetase GG844_14575 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_14575 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GG844_14580 PF07977 FabA-like domain GG844_14585 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_14585 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GG844_14590 PF03938 Outer membrane protein (OmpH-like) GG844_14595 PF01103 Surface antigen GG844_14595 PF07244 Surface antigen variable number repeat GG844_14600 PF02163 Peptidase family M50 GG844_14600 PF17820 PDZ domain GG844_14605 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GG844_14605 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GG844_14605 PF13288 DXP reductoisomerase C-terminal domain GG844_14615 PF01255 Putative undecaprenyl diphosphate synthase GG844_14620 PF01765 Ribosome recycling factor GG844_14625 PF00696 Amino acid kinase family GG844_14630 PF00889 Elongation factor TS GG844_14635 PF00318 Ribosomal protein S2 GG844_14640 PF00557 Metallopeptidase family M24 GG844_14645 PF01966 HD domain GG844_14645 PF01909 Nucleotidyltransferase domain GG844_14645 PF08335 GlnD PII-uridylyltransferase GG844_14650 PF11944 Protein of unknown function (DUF3461) GG844_14655 PF04608 Phosphatidylglycerophosphatase A GG844_14660 PF02769 AIR synthase related protein, C-terminal domain GG844_14660 PF00586 AIR synthase related protein, N-terminal domain GG844_14665 PF01029 NusB family GG844_14670 PF00885 6,7-dimethyl-8-ribityllumazine synthase GG844_14675 PF00925 GTP cyclohydrolase II GG844_14675 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GG844_14680 PF00677 Lumazine binding domain GG844_14685 PF01872 RibD C-terminal domain GG844_14685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GG844_14690 PF03477 ATP cone domain GG844_14695 PF00171 Aldehyde dehydrogenase family GG844_14700 PF00696 Amino acid kinase family GG844_14700 PF01472 PUA domain GG844_14705 PF07417 Sigma factor-binding transcriptional regulator Crl GG844_14715 PF00156 Phosphoribosyl transferase domain GG844_14720 PF00860 Permease family GG844_14725 PF07687 Peptidase dimerisation domain GG844_14725 PF01546 Peptidase family M20/M25/M40 GG844_14730 PF18030 RimK PreATP-grasp domain GG844_14730 PF08443 RimK-like ATP-grasp domain GG844_14735 PF18030 RimK PreATP-grasp domain GG844_14735 PF08443 RimK-like ATP-grasp domain GG844_14745 PF00209 Sodium:neurotransmitter symporter family GG844_14750 PF00990 Diguanylate cyclase, GGDEF domain GG844_14750 PF17158 Membrane-associated sensor, integral membrane domain GG844_14760 PF00817 impB/mucB/samB family GG844_14760 PF11798 IMS family HHH motif GG844_14770 PF02424 ApbE family GG844_14775 PF00111 2Fe-2S iron-sulfur cluster binding domain GG844_14775 PF00175 Oxidoreductase NAD-binding domain GG844_14775 PF00970 Oxidoreductase FAD-binding domain GG844_14780 PF02508 Rnf-Nqr subunit, membrane protein GG844_14785 PF02508 Rnf-Nqr subunit, membrane protein GG844_14790 PF04205 FMN-binding domain GG844_14795 PF03116 NQR2, RnfD, RnfE family GG844_14800 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GG844_14800 PF11973 NQRA C-terminal domain GG844_14805 PF01722 BolA-like protein GG844_14810 PF05175 Methyltransferase small domain GG844_14820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GG844_14830 PF07690 Major Facilitator Superfamily GG844_14840 PF04545 Sigma-70, region 4 GG844_14840 PF04542 Sigma-70 region 2 GG844_14850 PF03502 Nucleoside-specific channel-forming protein, Tsx GG844_14855 PF02558 Ketopantoate reductase PanE/ApbA GG844_14855 PF08546 Ketopantoate reductase PanE/ApbA C terminal GG844_14860 PF01965 DJ-1/PfpI family GG844_14865 PF00266 Aminotransferase class-V GG844_14870 PF02657 Fe-S metabolism associated domain GG844_14875 PF00899 ThiF family GG844_14880 PF06725 3D domain GG844_14880 PF03562 MltA specific insert domain GG844_14890 PF00696 Amino acid kinase family GG844_14890 PF00583 Acetyltransferase (GNAT) family GG844_14900 PF13538 UvrD-like helicase C-terminal domain GG844_14905 PF12705 PD-(D/E)XK nuclease superfamily GG844_14905 PF00580 UvrD/REP helicase N-terminal domain GG844_14905 PF13361 UvrD-like helicase C-terminal domain GG844_14910 PF17946 RecC C-terminal domain GG844_14925 PF07130 YebG protein GG844_14930 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GG844_14930 PF14602 Hexapeptide repeat of succinyl-transferase GG844_14940 PF00583 Acetyltransferase (GNAT) family GG844_14945 PF02080 TrkA-C domain GG844_14945 PF18030 RimK PreATP-grasp domain GG844_14945 PF08443 RimK-like ATP-grasp domain GG844_14950 PF01544 CorA-like Mg2+ transporter protein GG844_14960 PF01588 Putative tRNA binding domain GG844_14965 PF00356 Bacterial regulatory proteins, lacI family GG844_14970 PF00703 Glycosyl hydrolases family 2 GG844_14970 PF02837 Glycosyl hydrolases family 2, sugar binding domain GG844_14970 PF02929 Beta galactosidase small chain GG844_14970 PF16353 Domain of unknown function(DUF4981) GG844_14970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GG844_14980 PF00072 Response regulator receiver domain GG844_14985 PF00501 AMP-binding enzyme GG844_14990 PF00009 Elongation factor Tu GTP binding domain GG844_14990 PF14492 Elongation Factor G, domain II GG844_14990 PF03764 Elongation factor G, domain IV GG844_14990 PF03144 Elongation factor Tu domain 2 GG844_14990 PF00679 Elongation factor G C-terminus GG844_14995 PF18073 Rubredoxin metal binding domain GG844_15005 PF18429 Domain of unknown function (DUF5609) GG844_15015 PF01048 Phosphorylase superfamily GG844_15020 PF01676 Metalloenzyme superfamily GG844_15025 PF00591 Glycosyl transferase family, a/b domain GG844_15025 PF02885 Glycosyl transferase family, helical bundle domain GG844_15025 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GG844_15030 PF01791 DeoC/LacD family aldolase GG844_15040 PF01773 Na+ dependent nucleoside transporter N-terminus GG844_15040 PF07662 Na+ dependent nucleoside transporter C-terminus GG844_15040 PF07670 Nucleoside recognition GG844_15045 PF01026 TatD related DNase GG844_15050 PF03883 Peroxide stress protein YaaA GG844_15055 PF01235 Sodium:alanine symporter family GG844_15070 PF03167 Uracil DNA glycosylase superfamily GG844_15075 PF01261 Xylose isomerase-like TIM barrel GG844_15080 PF01228 Glycine radical GG844_15085 PF14821 Threonine synthase N terminus GG844_15085 PF00291 Pyridoxal-phosphate dependent enzyme GG844_15090 PF08544 GHMP kinases C terminal GG844_15090 PF00288 GHMP kinases N terminal domain GG844_15095 PF13840 ACT domain GG844_15095 PF01842 ACT domain GG844_15095 PF00696 Amino acid kinase family GG844_15095 PF00742 Homoserine dehydrogenase GG844_15095 PF03447 Homoserine dehydrogenase, NAD binding domain GG844_15110 PF03737 Aldolase/RraA GG844_15120 PF00072 Response regulator receiver domain GG844_15120 PF00486 Transcriptional regulatory protein, C terminal GG844_15125 PF18415 Histidine kinase receptor ArcB trans-membrane domain GG844_15125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_15125 PF00072 Response regulator receiver domain GG844_15125 PF00512 His Kinase A (phospho-acceptor) domain GG844_15125 PF00989 PAS fold GG844_15125 PF01627 Hpt domain GG844_15130 PF00990 Diguanylate cyclase, GGDEF domain GG844_15130 PF00563 EAL domain GG844_15130 PF01590 GAF domain GG844_15130 PF00360 Phytochrome region GG844_15135 PF16199 Radical_SAM C-terminal domain GG844_15135 PF04055 Radical SAM superfamily GG844_15140 PF00310 Glutamine amidotransferases class-II GG844_15140 PF04898 Glutamate synthase central domain GG844_15140 PF01645 Conserved region in glutamate synthase GG844_15140 PF01493 GXGXG motif GG844_15145 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_15145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GG844_15150 PF04898 Glutamate synthase central domain GG844_15150 PF00310 Glutamine amidotransferases class-II GG844_15150 PF01493 GXGXG motif GG844_15150 PF01645 Conserved region in glutamate synthase GG844_15155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GG844_15155 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_15165 PF01048 Phosphorylase superfamily GG844_15175 PF01497 Periplasmic binding protein GG844_15180 PF03458 UPF0126 domain GG844_15185 PF03466 LysR substrate binding domain GG844_15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_15190 PF01925 Sulfite exporter TauE/SafE GG844_15195 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GG844_15220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GG844_15220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GG844_15220 PF02142 MGS-like domain GG844_15225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GG844_15225 PF00117 Glutamine amidotransferase class-I GG844_15235 PF05173 Dihydrodipicolinate reductase, C-terminus GG844_15235 PF01113 Dihydrodipicolinate reductase, N-terminus GG844_15240 PF00293 NUDIX domain GG844_15245 PF02810 SEC-C motif GG844_15245 PF07516 SecA Wing and Scaffold domain GG844_15245 PF01043 SecA preprotein cross-linking domain GG844_15245 PF07517 SecA DEAD-like domain GG844_15255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GG844_15260 PF00091 Tubulin/FtsZ family, GTPase domain GG844_15260 PF12327 FtsZ family, C-terminal domain GG844_15265 PF02491 SHS2 domain inserted in FTSA GG844_15270 PF03799 Cell division protein FtsQ GG844_15270 PF08478 POTRA domain, FtsQ-type GG844_15275 PF08245 Mur ligase middle domain GG844_15275 PF02875 Mur ligase family, glutamate ligase domain GG844_15275 PF01225 Mur ligase family, catalytic domain GG844_15280 PF03033 Glycosyltransferase family 28 N-terminal domain GG844_15280 PF04101 Glycosyltransferase family 28 C-terminal domain GG844_15285 PF01098 Cell cycle protein GG844_15290 PF02875 Mur ligase family, glutamate ligase domain GG844_15290 PF08245 Mur ligase middle domain GG844_15295 PF00953 Glycosyl transferase family 4 GG844_15295 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GG844_15300 PF08245 Mur ligase middle domain GG844_15300 PF02875 Mur ligase family, glutamate ligase domain GG844_15300 PF01225 Mur ligase family, catalytic domain GG844_15305 PF02875 Mur ligase family, glutamate ligase domain GG844_15305 PF01225 Mur ligase family, catalytic domain GG844_15305 PF08245 Mur ligase middle domain GG844_15310 PF00905 Penicillin binding protein transpeptidase domain GG844_15310 PF03717 Penicillin-binding Protein dimerisation domain GG844_15315 PF04999 Cell division protein FtsL GG844_15320 PF01795 MraW methylase family GG844_15330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GG844_15330 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_15335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GG844_15335 PF02817 e3 binding domain GG844_15335 PF00364 Biotin-requiring enzyme GG844_15340 PF00456 Transketolase, thiamine diphosphate binding domain GG844_15340 PF17831 Pyruvate dehydrogenase E1 component middle domain GG844_15345 PF07729 FCD domain GG844_15345 PF00392 Bacterial regulatory proteins, gntR family GG844_15350 PF02872 5'-nucleotidase, C-terminal domain GG844_15350 PF00149 Calcineurin-like phosphoesterase GG844_15355 PF17768 RecJ OB domain GG844_15355 PF02272 DHHA1 domain GG844_15355 PF01368 DHH family GG844_15360 PF10411 Disulfide bond isomerase protein N-terminus GG844_15360 PF13098 Thioredoxin-like domain GG844_15365 PF02899 Phage integrase, N-terminal SAM-like domain GG844_15365 PF00589 Phage integrase family GG844_15370 PF00258 Flavodoxin GG844_15375 PF01510 N-acetylmuramoyl-L-alanine amidase GG844_15380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GG844_15380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GG844_15385 PF00114 Pilin (bacterial filament) GG844_15385 PF07963 Prokaryotic N-terminal methylation motif GG844_15390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GG844_15390 PF00437 Type II/IV secretion system protein GG844_15395 PF00482 Type II secretion system (T2SS), protein F GG844_15400 PF06750 Bacterial Peptidase A24 N-terminal domain GG844_15400 PF01478 Type IV leader peptidase family GG844_15405 PF01121 Dephospho-CoA kinase GG844_15410 PF07072 Cell division protein GG844_15415 PF03884 DNA gyrase inhibitor YacG GG844_15420 PF03989 DNA gyrase C-terminal domain, beta-propeller GG844_15420 PF00521 DNA gyrase/topoisomerase IV, subunit A GG844_15425 PF00986 DNA gyrase B subunit, carboxyl terminus GG844_15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_15425 PF01751 Toprim domain GG844_15425 PF00204 DNA gyrase B GG844_15430 PF05728 Uncharacterised protein family (UPF0227) GG844_15435 PF00149 Calcineurin-like phosphoesterase GG844_15440 PF06853 Protein of unknown function (DUF1249) GG844_15445 PF00293 NUDIX domain GG844_15450 PF02321 Outer membrane efflux protein GG844_15455 PF00294 pfkB family carbohydrate kinase GG844_15455 PF01467 Cytidylyltransferase-like GG844_15460 PF08335 GlnD PII-uridylyltransferase GG844_15460 PF03710 Glutamate-ammonia ligase adenylyltransferase GG844_15465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_15465 PF02743 Cache domain GG844_15465 PF00672 HAMP domain GG844_15475 PF01928 CYTH domain GG844_15480 PF01865 Protein of unknown function DUF47 GG844_15485 PF01384 Phosphate transporter family GG844_15490 PF08239 Bacterial SH3 domain GG844_15500 PF01471 Putative peptidoglycan binding domain GG844_15500 PF13401 AAA domain GG844_15505 PF01966 HD domain GG844_15505 PF01743 Poly A polymerase head domain GG844_15505 PF12627 Probable RNA and SrmB- binding site of polymerase A GG844_15510 PF00113 Enolase, C-terminal TIM barrel domain GG844_15510 PF03952 Enolase, N-terminal domain GG844_15515 PF00117 Glutamine amidotransferase class-I GG844_15515 PF06418 CTP synthase N-terminus GG844_15520 PF03819 MazG nucleotide pyrophosphohydrolase domain GG844_15525 PF02824 TGS domain GG844_15525 PF04607 Region found in RelA / SpoT proteins GG844_15525 PF13291 ACT domain GG844_15530 PF01938 TRAM domain GG844_15530 PF05958 tRNA (Uracil-5-)-methyltransferase GG844_15535 PF00072 Response regulator receiver domain GG844_15535 PF00512 His Kinase A (phospho-acceptor) domain GG844_15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_15535 PF00672 HAMP domain GG844_15535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GG844_15535 PF01627 Hpt domain GG844_15540 PF00990 Diguanylate cyclase, GGDEF domain GG844_15555 PF01648 4'-phosphopantetheinyl transferase superfamily GG844_15560 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GG844_15565 PF02565 Recombination protein O C terminal GG844_15565 PF11967 Recombination protein O N terminal GG844_15570 PF07650 KH domain GG844_15570 PF01926 50S ribosome-binding GTPase GG844_15575 PF00035 Double-stranded RNA binding motif GG844_15575 PF14622 Ribonuclease-III-like GG844_15580 PF10502 Signal peptidase, peptidase S26 GG844_15585 PF03144 Elongation factor Tu domain 2 GG844_15585 PF00679 Elongation factor G C-terminus GG844_15585 PF06421 GTP-binding protein LepA C-terminus GG844_15585 PF00009 Elongation factor Tu GTP binding domain GG844_15595 PF17188 MucB/RseB C-terminal domain GG844_15595 PF03888 MucB/RseB N-terminal domain GG844_15600 PF03873 Anti sigma-E protein RseA, C-terminal domain GG844_15600 PF03872 Anti sigma-E protein RseA, N-terminal domain GG844_15605 PF08281 Sigma-70, region 4 GG844_15605 PF04542 Sigma-70 region 2 GG844_15610 PF00890 FAD binding domain GG844_15610 PF02910 Fumarate reductase flavoprotein C-term GG844_15620 PF03937 Flavinator of succinate dehydrogenase GG844_15635 PF01494 FAD binding domain GG844_15640 PF01494 FAD binding domain GG844_15645 PF03695 Uncharacterised protein family (UPF0149) GG844_15650 PF05164 Cell division protein ZapA GG844_15660 PF01812 5-formyltetrahydrofolate cyclo-ligase family GG844_15665 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GG844_15670 PF01842 ACT domain GG844_15670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GG844_15670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GG844_15675 PF10369 Small subunit of acetolactate synthase GG844_15680 PF00205 Thiamine pyrophosphate enzyme, central domain GG844_15680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GG844_15680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GG844_15685 PF00501 AMP-binding enzyme GG844_15690 PF03466 LysR substrate binding domain GG844_15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_15700 PF01569 PAP2 superfamily GG844_15710 PF00682 HMGL-like GG844_15710 PF08502 LeuA allosteric (dimerisation) domain GG844_15715 PF00180 Isocitrate/isopropylmalate dehydrogenase GG844_15720 PF00330 Aconitase family (aconitate hydratase) GG844_15725 PF00694 Aconitase C-terminal domain GG844_15770 PF00072 Response regulator receiver domain GG844_15785 PF03739 Lipopolysaccharide export system permease LptF/LptG GG844_15790 PF03739 Lipopolysaccharide export system permease LptF/LptG GG844_15795 PF02789 Cytosol aminopeptidase family, N-terminal domain GG844_15795 PF00883 Cytosol aminopeptidase family, catalytic domain GG844_15800 PF04364 DNA polymerase III chi subunit, HolC GG844_15805 PF10458 Valyl tRNA synthetase tRNA binding arm GG844_15805 PF00133 tRNA synthetases class I (I, L, M and V) GG844_15805 PF08264 Anticodon-binding domain of tRNA GG844_15810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GG844_15810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GG844_15815 PF00849 RNA pseudouridylate synthase GG844_15820 PF00176 SNF2 family N-terminal domain GG844_15820 PF12137 RNA polymerase recycling family C-terminal GG844_15820 PF18337 RapA N-terminal Tudor like domain GG844_15820 PF00271 Helicase conserved C-terminal domain GG844_15820 PF18339 RapA N-terminal Tudor like domain 1 GG844_15825 PF13638 PIN domain GG844_15825 PF02562 PhoH-like protein GG844_15830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GG844_15830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GG844_15835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GG844_15835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GG844_15840 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GG844_15840 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GG844_15845 PF01042 Endoribonuclease L-PSP GG844_15850 PF01553 Acyltransferase GG844_15855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GG844_15860 PF01722 BolA-like protein GG844_15870 PF05494 MlaC protein GG844_15875 PF02470 MlaD protein GG844_15880 PF02405 Permease MlaE GG844_15885 PF00005 ABC transporter GG844_15890 PF01699 Sodium/calcium exchanger protein GG844_15895 PF00571 CBS domain GG844_15895 PF01380 SIS domain GG844_15910 PF03968 OstA-like protein GG844_15915 PF00005 ABC transporter GG844_15915 PF12399 Branched-chain amino acid ATP-binding cassette transporter GG844_15920 PF00309 Sigma-54 factor, Activator interacting domain (AID) GG844_15920 PF04552 Sigma-54, DNA binding domain GG844_15920 PF04963 Sigma-54 factor, core binding domain GG844_15925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GG844_15930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GG844_15935 PF03668 P-loop ATPase protein family GG844_15940 PF00381 PTS HPr component phosphorylation site GG844_15945 PF00571 CBS domain GG844_15945 PF01769 Divalent cation transporter GG844_15945 PF03448 MgtE intracellular N domain GG844_15950 PF01523 Putative modulator of DNA gyrase GG844_15955 PF04751 Protein of unknown function (DUF615) GG844_15960 PF00005 ABC transporter GG844_15965 PF00528 Binding-protein-dependent transport system inner membrane component GG844_15975 PF02441 Flavoprotein GG844_15980 PF08245 Mur ligase middle domain GG844_15980 PF02875 Mur ligase family, glutamate ligase domain GG844_15980 PF01225 Mur ligase family, catalytic domain GG844_15985 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GG844_15990 PF00719 Inorganic pyrophosphatase GG844_15995 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GG844_16000 PF04357 TamB, inner membrane protein subunit of TAM complex GG844_16005 PF01103 Surface antigen GG844_16005 PF17243 POTRA domain TamA domain 1 GG844_16005 PF07244 Surface antigen variable number repeat GG844_16010 PF01625 Peptide methionine sulfoxide reductase GG844_16015 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GG844_16020 PF10795 Protein of unknown function (DUF2607) GG844_16030 PF02687 FtsX-like permease family GG844_16030 PF12704 MacB-like periplasmic core domain GG844_16030 PF00005 ABC transporter GG844_16055 PF00009 Elongation factor Tu GTP binding domain GG844_16060 PF01507 Phosphoadenosine phosphosulfate reductase family GG844_16065 PF10414 Sirohaem synthase dimerisation region GG844_16065 PF14824 Sirohaem biosynthesis protein central GG844_16065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GG844_16070 PF00149 Calcineurin-like phosphoesterase GG844_16070 PF02872 5'-nucleotidase, C-terminal domain GG844_16080 PF00271 Helicase conserved C-terminal domain GG844_16080 PF03880 DbpA RNA binding domain GG844_16080 PF00270 DEAD/DEAH box helicase GG844_16085 PF13673 Acetyltransferase (GNAT) domain GG844_16090 PF00892 EamA-like transporter family GG844_16095 PF08525 Opacity-associated protein A N-terminal motif GG844_16095 PF04225 Opacity-associated protein A LysM-like domain GG844_16100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GG844_16100 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GG844_16110 PF01797 Transposase IS200 like GG844_16120 PF01196 Ribosomal protein L17 GG844_16125 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GG844_16125 PF01000 RNA polymerase Rpb3/RpoA insert domain GG844_16125 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GG844_16130 PF01479 S4 domain GG844_16130 PF00163 Ribosomal protein S4/S9 N-terminal domain GG844_16135 PF00411 Ribosomal protein S11 GG844_16140 PF00416 Ribosomal protein S13/S18 GG844_16145 PF00444 Ribosomal protein L36 GG844_16150 PF00344 SecY translocase GG844_16155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GG844_16160 PF00327 Ribosomal protein L30p/L7e GG844_16165 PF03719 Ribosomal protein S5, C-terminal domain GG844_16165 PF00333 Ribosomal protein S5, N-terminal domain GG844_16170 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GG844_16175 PF00347 Ribosomal protein L6 GG844_16180 PF00410 Ribosomal protein S8 GG844_16185 PF00253 Ribosomal protein S14p/S29e GG844_16190 PF00673 ribosomal L5P family C-terminus GG844_16190 PF00281 Ribosomal protein L5 GG844_16195 PF00467 KOW motif GG844_16195 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GG844_16200 PF00238 Ribosomal protein L14p/L23e GG844_16205 PF00366 Ribosomal protein S17 GG844_16210 PF00831 Ribosomal L29 protein GG844_16215 PF00252 Ribosomal protein L16p/L10e GG844_16220 PF00189 Ribosomal protein S3, C-terminal domain GG844_16220 PF07650 KH domain GG844_16225 PF00237 Ribosomal protein L22p/L17e GG844_16230 PF00203 Ribosomal protein S19 GG844_16235 PF00181 Ribosomal Proteins L2, RNA binding domain GG844_16235 PF03947 Ribosomal Proteins L2, C-terminal domain GG844_16240 PF00276 Ribosomal protein L23 GG844_16245 PF00573 Ribosomal protein L4/L1 family GG844_16250 PF00297 Ribosomal protein L3 GG844_16255 PF00338 Ribosomal protein S10p/S20e GG844_16260 PF00588 SpoU rRNA Methylase family GG844_16260 PF08032 RNA 2'-O ribose methyltransferase substrate binding GG844_16265 PF17876 Cold shock domain GG844_16265 PF00575 S1 RNA binding domain GG844_16265 PF00773 RNB domain GG844_16265 PF08461 Ribonuclease R winged-helix domain GG844_16265 PF08206 Ribonuclease B OB domain GG844_16270 PF11893 Domain of unknown function (DUF3413) GG844_16270 PF00884 Sulfatase GG844_16275 PF08238 Sel1 repeat GG844_16280 PF00709 Adenylosuccinate synthetase GG844_16285 PF01112 Asparaginase GG844_16290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GG844_16300 PF02254 TrkA-N domain GG844_16300 PF00999 Sodium/hydrogen exchanger family GG844_16305 PF02525 Flavodoxin-like fold GG844_16310 PF12848 ABC transporter GG844_16310 PF00005 ABC transporter GG844_16320 PF00561 alpha/beta hydrolase fold GG844_16325 PF06794 Uncharacterised protein family (UPF0270) GG844_16330 PF00485 Phosphoribulokinase / Uridine kinase family GG844_16335 PF00027 Cyclic nucleotide-binding domain GG844_16335 PF13545 Crp-like helix-turn-helix domain GG844_16345 PF00171 Aldehyde dehydrogenase family GG844_16350 PF04958 Arginine N-succinyltransferase beta subunit GG844_16355 PF00202 Aminotransferase class-III GG844_16360 PF00117 Glutamine amidotransferase class-I GG844_16365 PF04055 Radical SAM superfamily GG844_16365 PF18693 TRAM domain GG844_16365 PF00919 Uncharacterized protein family UPF0004 GG844_16380 PF00579 tRNA synthetases class I (W and Y) GG844_16385 PF13419 Haloacid dehalogenase-like hydrolase GG844_16390 PF00834 Ribulose-phosphate 3 epimerase family GG844_16395 PF02086 D12 class N6 adenine-specific DNA methyltransferase GG844_16405 PF01761 3-dehydroquinate synthase GG844_16410 PF01202 Shikimate kinase GG844_16415 PF03958 Bacterial type II/III secretion system short domain GG844_16415 PF07660 Secretin and TonB N terminus short domain GG844_16415 PF11741 AMIN domain GG844_16415 PF00263 Bacterial type II and III secretion system protein GG844_16440 PF17092 Penicillin-binding protein OB-like domain GG844_16440 PF00912 Transglycosylase GG844_16440 PF00905 Penicillin binding protein transpeptidase domain GG844_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_16445 PF03466 LysR substrate binding domain GG844_16450 PF08534 Redoxin GG844_16450 PF00462 Glutaredoxin GG844_16455 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_16455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GG844_16465 PF00206 Lyase GG844_16465 PF14698 Argininosuccinate lyase C-terminal GG844_16470 PF00764 Arginosuccinate synthase GG844_16475 PF00696 Amino acid kinase family GG844_16480 PF02774 Semialdehyde dehydrogenase, dimerisation domain GG844_16480 PF01118 Semialdehyde dehydrogenase, NAD binding domain GG844_16485 PF01546 Peptidase family M20/M25/M40 GG844_16485 PF07687 Peptidase dimerisation domain GG844_16490 PF00311 Phosphoenolpyruvate carboxylase GG844_16500 PF06426 Serine acetyltransferase, N-terminal GG844_16500 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_16505 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GG844_16505 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GG844_16510 PF02556 Preprotein translocase subunit SecB GG844_16515 PF00581 Rhodanese-like domain GG844_16520 PF00152 tRNA synthetases class II (D, K and N) GG844_16525 PF02910 Fumarate reductase flavoprotein C-term GG844_16525 PF00890 FAD binding domain GG844_16530 PF13183 4Fe-4S dicluster domain GG844_16530 PF13085 2Fe-2S iron-sulfur cluster binding domain GG844_16535 PF02300 Fumarate reductase subunit C GG844_16540 PF02313 Fumarate reductase subunit D GG844_16545 PF01132 Elongation factor P (EF-P) OB domain GG844_16545 PF08207 Elongation factor P (EF-P) KOW-like domain GG844_16545 PF09285 Elongation factor P, C-terminal GG844_16550 PF04055 Radical SAM superfamily GG844_16560 PF00118 TCP-1/cpn60 chaperonin family GG844_16565 PF00166 Chaperonin 10 Kd subunit GG844_16570 PF08220 DeoR-like helix-turn-helix domain GG844_16570 PF00455 DeoR C terminal sensor domain GG844_16590 PF00121 Triosephosphate isomerase GG844_16600 PF03737 Aldolase/RraA GG844_16605 PF01040 UbiA prenyltransferase family GG844_16610 PF10431 C-terminal, D2-small domain, of ClpB protein GG844_16610 PF07724 AAA domain (Cdc48 subfamily) GG844_16610 PF00004 ATPase family associated with various cellular activities (AAA) GG844_16615 PF00227 Proteasome subunit GG844_16620 PF05036 Sporulation related domain GG844_16625 PF00356 Bacterial regulatory proteins, lacI family GG844_16630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GG844_16630 PF00271 Helicase conserved C-terminal domain GG844_16630 PF17764 3′ DNA-binding domain (3′BD) GG844_16630 PF00270 DEAD/DEAH box helicase GG844_16630 PF18074 Primosomal protein N C-terminal domain GG844_16635 PF01197 Ribosomal protein L31 GG844_16640 PF03949 Malic enzyme, NAD binding domain GG844_16640 PF00390 Malic enzyme, N-terminal domain GG844_16645 PF01340 Met Apo-repressor, MetJ GG844_16650 PF01053 Cys/Met metabolism PLP-dependent enzyme GG844_16655 PF00696 Amino acid kinase family GG844_16655 PF03447 Homoserine dehydrogenase, NAD binding domain GG844_16655 PF00742 Homoserine dehydrogenase GG844_16660 PF02219 Methylenetetrahydrofolate reductase GG844_16665 PF06005 Cell division protein ZapB GG844_16670 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GG844_16675 PF00365 Phosphofructokinase GG844_16680 PF16916 Dimerisation domain of Zinc Transporter GG844_16680 PF01545 Cation efflux family GG844_16690 PF00072 Response regulator receiver domain GG844_16690 PF00486 Transcriptional regulatory protein, C terminal GG844_16695 PF00672 HAMP domain GG844_16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_16695 PF16527 Two-component sensor protein CpxA, periplasmic domain GG844_16695 PF00512 His Kinase A (phospho-acceptor) domain GG844_16700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GG844_16700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GG844_16705 PF00588 SpoU rRNA Methylase family GG844_16710 PF04186 FxsA cytoplasmic membrane protein GG844_16715 PF17158 Membrane-associated sensor, integral membrane domain GG844_16715 PF00990 Diguanylate cyclase, GGDEF domain GG844_16720 PF10415 Fumarase C C-terminus GG844_16720 PF00206 Lyase GG844_16725 PF03605 Anaerobic c4-dicarboxylate membrane transporter GG844_16735 PF02683 Cytochrome C biogenesis protein transmembrane region GG844_16735 PF11412 Disulphide bond corrector protein DsbC GG844_16740 PF00072 Response regulator receiver domain GG844_16740 PF00196 Bacterial regulatory proteins, luxR family GG844_16745 PF00999 Sodium/hydrogen exchanger family GG844_16745 PF02080 TrkA-C domain GG844_16745 PF03471 Transporter associated domain GG844_16755 PF00474 Sodium:solute symporter family GG844_16760 PF02592 Putative vitamin uptake transporter GG844_16765 PF00625 Guanylate kinase GG844_16770 PF01192 RNA polymerase Rpb6 GG844_16775 PF13291 ACT domain GG844_16775 PF04607 Region found in RelA / SpoT proteins GG844_16775 PF02824 TGS domain GG844_16780 PF00271 Helicase conserved C-terminal domain GG844_16780 PF00270 DEAD/DEAH box helicase GG844_16780 PF17191 RecG wedge domain GG844_16785 PF00860 Permease family GG844_16790 PF00672 HAMP domain GG844_16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_16790 PF00512 His Kinase A (phospho-acceptor) domain GG844_16795 PF00486 Transcriptional regulatory protein, C terminal GG844_16795 PF00072 Response regulator receiver domain GG844_16800 PF03449 Transcription elongation factor, N-terminal GG844_16800 PF01272 Transcription elongation factor, GreA/GreB, C-term GG844_16805 PF17674 HHH domain GG844_16805 PF00575 S1 RNA binding domain GG844_16805 PF09371 Tex-like protein N-terminal domain GG844_16805 PF16921 Tex protein YqgF-like domain GG844_16815 PF00561 alpha/beta hydrolase fold GG844_16820 PF00156 Phosphoribosyl transferase domain GG844_16825 PF01521 Iron-sulphur cluster biosynthesis GG844_16825 PF01106 NifU-like domain GG844_16830 PF00293 NUDIX domain GG844_16835 PF00459 Inositol monophosphatase family GG844_16840 PF01203 Type II secretion system (T2SS), protein N GG844_16845 PF04612 Type II secretion system (T2SS), protein M GG844_16850 PF12693 GspL periplasmic domain GG844_16850 PF05134 Type II secretion system (T2SS), protein L GG844_16855 PF03934 Type II secretion system (T2SS), protein K GG844_16860 PF07963 Prokaryotic N-terminal methylation motif GG844_16860 PF11612 Type II secretion system (T2SS), protein J GG844_16865 PF07963 Prokaryotic N-terminal methylation motif GG844_16865 PF02501 Type II secretion system (T2SS), protein I GG844_16870 PF12019 Type II transport protein GspH GG844_16875 PF07963 Prokaryotic N-terminal methylation motif GG844_16875 PF08334 Type II secretion system (T2SS), protein G GG844_16880 PF00482 Type II secretion system (T2SS), protein F GG844_16885 PF00437 Type II/IV secretion system protein GG844_16890 PF03958 Bacterial type II/III secretion system short domain GG844_16890 PF00263 Bacterial type II and III secretion system protein GG844_16895 PF11356 Type II secretion system protein C GG844_16900 PF01479 S4 domain GG844_16905 PF01430 Hsp33 protein GG844_16910 PF01293 Phosphoenolpyruvate carboxykinase GG844_16920 PF09500 Putative thioesterase (yiiD_Cterm) GG844_16920 PF00583 Acetyltransferase (GNAT) family GG844_16925 PF02580 D-Tyr-tRNA(Tyr) deacylase GG844_16930 PF03631 Virulence factor BrkB GG844_16935 PF03668 P-loop ATPase protein family GG844_16950 PF03951 Glutamine synthetase, beta-Grasp domain GG844_16950 PF00120 Glutamine synthetase, catalytic domain GG844_16960 PF00989 PAS fold GG844_16960 PF00512 His Kinase A (phospho-acceptor) domain GG844_16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_16965 PF00158 Sigma-54 interaction domain GG844_16965 PF00072 Response regulator receiver domain GG844_16965 PF02954 Bacterial regulatory protein, Fis family GG844_16970 PF03707 Bacterial signalling protein N terminal repeat GG844_16970 PF00563 EAL domain GG844_16970 PF13188 PAS domain GG844_16970 PF00990 Diguanylate cyclase, GGDEF domain GG844_16975 PF00962 Adenosine/AMP deaminase GG844_17045 PF01177 Asp/Glu/Hydantoin racemase GG844_17050 PF04151 Bacterial pre-peptidase C-terminal domain GG844_17050 PF00082 Subtilase family GG844_17050 PF05922 Peptidase inhibitor I9 GG844_17055 PF07715 TonB-dependent Receptor Plug Domain GG844_17055 PF00593 TonB dependent receptor GG844_17075 PF01381 Helix-turn-helix GG844_17085 PF13657 HipA N-terminal domain GG844_17085 PF07804 HipA-like C-terminal domain GG844_17135 PF02796 Helix-turn-helix domain of resolvase GG844_17135 PF00239 Resolvase, N terminal domain GG844_17160 PF05958 tRNA (Uracil-5-)-methyltransferase GG844_17170 PF00440 Bacterial regulatory proteins, tetR family GG844_17175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GG844_17175 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_17180 PF04545 Sigma-70, region 4 GG844_17180 PF04542 Sigma-70 region 2 GG844_17180 PF00140 Sigma-70 factor, region 1.2 GG844_17185 PF18075 FtsX extracellular domain GG844_17190 PF00005 ABC transporter GG844_17195 PF00448 SRP54-type protein, GTPase domain GG844_17195 PF02881 SRP54-type protein, helical bundle domain GG844_17235 PF00210 Ferritin-like domain GG844_17240 PF08668 HDOD domain GG844_17240 PF00563 EAL domain GG844_17245 PF01810 LysE type translocator GG844_17250 PF12146 Serine aminopeptidase, S33 GG844_17270 PF08495 FIST N domain GG844_17270 PF00563 EAL domain GG844_17270 PF10442 FIST C domain GG844_17270 PF00990 Diguanylate cyclase, GGDEF domain GG844_17275 PF13419 Haloacid dehalogenase-like hydrolase GG844_17280 PF02899 Phage integrase, N-terminal SAM-like domain GG844_17280 PF00589 Phage integrase family GG844_17285 PF04340 Protein of unknown function, DUF484 GG844_17290 PF01678 Diaminopimelate epimerase GG844_17295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GG844_17295 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GG844_17305 PF01491 Frataxin-like domain GG844_17310 PF12633 Adenylate cyclase NT domain GG844_17310 PF01295 Adenylate cyclase, class-I GG844_17320 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GG844_17320 PF03900 Porphobilinogen deaminase, C-terminal domain GG844_17325 PF02602 Uroporphyrinogen-III synthase HemD GG844_17330 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GG844_17335 PF07219 HemY protein N-terminus GG844_17340 PF04055 Radical SAM superfamily GG844_17340 PF06969 HemN C-terminal domain GG844_17345 PF10675 Protein of unknown function (DUF2489) GG844_17350 PF04220 Der GTPase activator (YihI) GG844_17360 PF00034 Cytochrome c GG844_17365 PF01926 50S ribosome-binding GTPase GG844_17370 PF01612 3'-5' exonuclease GG844_17370 PF00476 DNA polymerase family A GG844_17370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GG844_17370 PF01367 5'-3' exonuclease, C-terminal SAM fold GG844_17380 PF00490 Delta-aminolevulinic acid dehydratase GG844_17385 PF01026 TatD related DNase GG844_17390 PF00581 Rhodanese-like domain GG844_17395 PF01694 Rhomboid family GG844_17395 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GG844_17400 PF02203 Tar ligand binding domain homologue GG844_17400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_17400 PF00672 HAMP domain GG844_17405 PF03748 Flagellar basal body-associated protein FliL GG844_17415 PF04345 Chorismate lyase GG844_17420 PF01040 UbiA prenyltransferase family GG844_17425 PF01553 Acyltransferase GG844_17430 PF00717 Peptidase S24-like GG844_17430 PF01726 LexA DNA binding domain GG844_17440 PF01554 MatE GG844_17445 PF03150 Di-haem cytochrome c peroxidase GG844_17445 PF00034 Cytochrome c GG844_17450 PF00902 Sec-independent protein translocase protein (TatC) GG844_17455 PF02416 mttA/Hcf106 family GG844_17460 PF02416 mttA/Hcf106 family GG844_17465 PF03109 ABC1 family GG844_17470 PF02036 SCP-2 sterol transfer family GG844_17475 PF01209 ubiE/COQ5 methyltransferase family GG844_17480 PF02646 RmuC family GG844_17495 PF10625 Universal stress protein B (UspB) GG844_17500 PF00210 Ferritin-like domain GG844_17510 PF00582 Universal stress protein family GG844_17515 PF00892 EamA-like transporter family GG844_17525 PF04445 Putative SAM-dependent methyltransferase GG844_17530 PF00990 Diguanylate cyclase, GGDEF domain GG844_17530 PF00563 EAL domain GG844_17530 PF08448 PAS fold GG844_17535 PF01037 Lrp/AsnC ligand binding domain GG844_17545 PF07690 Major Facilitator Superfamily GG844_17550 PF03466 LysR substrate binding domain GG844_17550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_17555 PF00557 Metallopeptidase family M24 GG844_17555 PF01321 Creatinase/Prolidase N-terminal domain GG844_17555 PF01321 Creatinase/Prolidase N-terminal domain GG844_17555 PF00557 Metallopeptidase family M24 GG844_17560 PF06968 Biotin and Thiamin Synthesis associated domain GG844_17560 PF04055 Radical SAM superfamily GG844_17565 PF05690 Thiazole biosynthesis protein ThiG GG844_17570 PF02597 ThiS family GG844_17575 PF00899 ThiF family GG844_17580 PF02581 Thiamine monophosphate synthase GG844_17585 PF13667 ThiC-associated domain GG844_17585 PF01964 Radical SAM ThiC family GG844_17590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GG844_17630 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_17640 PF08501 Shikimate dehydrogenase substrate binding domain GG844_17640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GG844_17640 PF01488 Shikimate / quinate 5-dehydrogenase GG844_17645 PF01218 Coproporphyrinogen III oxidase GG844_17650 PF01300 Telomere recombination GG844_17655 PF00731 AIR carboxylase GG844_17660 PF02222 ATP-grasp domain GG844_17660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GG844_17665 PF01396 Topoisomerase DNA binding C4 zinc finger GG844_17670 PF04361 Protein of unknown function (DUF494) GG844_17675 PF17782 DprA winged helix domain GG844_17675 PF02481 DNA recombination-mediator protein A GG844_17680 PF01476 LysM domain GG844_17685 PF01327 Polypeptide deformylase GG844_17690 PF02911 Formyl transferase, C-terminal domain GG844_17690 PF00551 Formyl transferase GG844_17695 PF01029 NusB family GG844_17695 PF01189 16S rRNA methyltransferase RsmB/F GG844_17700 PF02254 TrkA-N domain GG844_17700 PF02080 TrkA-C domain GG844_17705 PF02386 Cation transport protein GG844_17715 PF03006 Haemolysin-III related GG844_17720 PF07070 SpoOM protein GG844_17730 PF06288 Protein of unknown function (DUF1040) GG844_17735 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GG844_17735 PF12801 4Fe-4S binding domain GG844_17735 PF13746 4Fe-4S dicluster domain GG844_17740 PF01636 Phosphotransferase enzyme family GG844_17745 PF01323 DSBA-like thioredoxin domain GG844_17750 PF01553 Acyltransferase GG844_17755 PF13335 Magnesium chelatase, subunit ChlI C-terminal GG844_17755 PF01078 Magnesium chelatase, subunit ChlI GG844_17760 PF00205 Thiamine pyrophosphate enzyme, central domain GG844_17760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GG844_17760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GG844_17770 PF01063 Amino-transferase class IV GG844_17775 PF00920 Dehydratase family GG844_17780 PF00585 C-terminal regulatory domain of Threonine dehydratase GG844_17780 PF00291 Pyridoxal-phosphate dependent enzyme GG844_17785 PF00107 Zinc-binding dehydrogenase GG844_17785 PF08240 Alcohol dehydrogenase GroES-like domain GG844_17795 PF01206 Sulfurtransferase TusA GG844_17805 PF01169 Uncharacterized protein family UPF0016 GG844_17810 PF02091 Glycyl-tRNA synthetase alpha subunit GG844_17815 PF02092 Glycyl-tRNA synthetase beta subunit GG844_17815 PF05746 DALR anticodon binding domain GG844_17820 PF00155 Aminotransferase class I and II GG844_17825 PF00011 Hsp20/alpha crystallin family GG844_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_17840 PF00204 DNA gyrase B GG844_17840 PF00986 DNA gyrase B subunit, carboxyl terminus GG844_17840 PF18053 DNA gyrase B subunit insert domain GG844_17840 PF01751 Toprim domain GG844_17845 PF02463 RecF/RecN/SMC N terminal domain GG844_17850 PF02767 DNA polymerase III beta subunit, central domain GG844_17850 PF00712 DNA polymerase III beta subunit, N-terminal domain GG844_17850 PF02768 DNA polymerase III beta subunit, C-terminal domain GG844_17855 PF11638 DnaA N-terminal domain GG844_17855 PF08299 Bacterial dnaA protein helix-turn-helix GG844_17855 PF00308 Bacterial dnaA protein GG844_17860 PF00497 Bacterial extracellular solute-binding proteins, family 3 GG844_17865 PF00528 Binding-protein-dependent transport system inner membrane component GG844_17870 PF00005 ABC transporter GG844_17875 PF00468 Ribosomal protein L34 GG844_17880 PF00825 Ribonuclease P GG844_17885 PF01809 Putative membrane protein insertion efficiency factor GG844_17890 PF02096 60Kd inner membrane protein GG844_17890 PF14849 YidC periplasmic domain GG844_17895 PF01926 50S ribosome-binding GTPase GG844_17895 PF10396 GTP-binding protein TrmE N-terminus GG844_17895 PF12631 MnmE helical domain GG844_17900 PF00258 Flavodoxin GG844_17910 PF01134 Glucose inhibited division protein A GG844_17910 PF13932 GidA associated domain GG844_17915 PF02527 rRNA small subunit methyltransferase G GG844_17920 PF13614 AAA domain GG844_17925 PF02195 ParB-like nuclease domain GG844_17925 PF17762 HTH domain found in ParB protein GG844_17930 PF03899 ATP synthase I chain GG844_17935 PF00119 ATP synthase A chain GG844_17940 PF00137 ATP synthase subunit C GG844_17945 PF00430 ATP synthase B/B' CF(0) GG844_17950 PF00213 ATP synthase delta (OSCP) subunit GG844_17955 PF00306 ATP synthase alpha/beta chain, C terminal domain GG844_17955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GG844_17955 PF02874 ATP synthase alpha/beta family, beta-barrel domain GG844_17960 PF00231 ATP synthase GG844_17965 PF02874 ATP synthase alpha/beta family, beta-barrel domain GG844_17965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GG844_17970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GG844_17970 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GG844_17975 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_17975 PF12804 MobA-like NTP transferase domain GG844_17980 PF07690 Major Facilitator Superfamily GG844_17985 PF03466 LysR substrate binding domain GG844_17985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_17990 PF02803 Thiolase, C-terminal domain GG844_17990 PF00108 Thiolase, N-terminal domain GG844_17995 PF00378 Enoyl-CoA hydratase/isomerase GG844_17995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GG844_17995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GG844_18000 PF01205 Uncharacterized protein family UPF0029 GG844_18000 PF09186 Domain of unknown function (DUF1949) GG844_18005 PF02386 Cation transport protein GG844_18010 PF12724 Flavodoxin domain GG844_18055 PF03466 LysR substrate binding domain GG844_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GG844_18060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GG844_18060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GG844_18065 PF04380 Membrane fusogenic activity GG844_18070 PF00873 AcrB/AcrD/AcrF family GG844_18075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GG844_18080 PF00440 Bacterial regulatory proteins, tetR family GG844_18085 PF00580 UvrD/REP helicase N-terminal domain GG844_18085 PF13361 UvrD-like helicase C-terminal domain GG844_18090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GG844_18130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GG844_18130 PF00005 ABC transporter GG844_18135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GG844_18145 PF00528 Binding-protein-dependent transport system inner membrane component GG844_18145 PF12911 N-terminal TM domain of oligopeptide transport permease C GG844_18155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GG844_18155 PF07992 Pyridine nucleotide-disulphide oxidoreductase GG844_18160 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GG844_18165 PF01432 Peptidase family M3 GG844_18170 PF00580 UvrD/REP helicase N-terminal domain GG844_18170 PF13361 UvrD-like helicase C-terminal domain GG844_18175 PF01810 LysE type translocator GG844_18180 PF12833 Helix-turn-helix domain GG844_18190 PF00892 EamA-like transporter family GG844_18195 PF00270 DEAD/DEAH box helicase GG844_18195 PF09382 RQC domain GG844_18195 PF00271 Helicase conserved C-terminal domain GG844_18195 PF16124 RecQ zinc-binding GG844_18195 PF00570 HRDC domain GG844_18210 PF00005 ABC transporter GG844_18210 PF00664 ABC transporter transmembrane region GG844_18215 PF00593 TonB dependent receptor GG844_18215 PF07715 TonB-dependent Receptor Plug Domain GG844_18220 PF00005 ABC transporter GG844_18225 PF01497 Periplasmic binding protein GG844_18230 PF01032 FecCD transport family GG844_18235 PF01380 SIS domain GG844_18235 PF01418 Helix-turn-helix domain, rpiR family GG844_18245 PF13580 SIS domain GG844_18250 PF02378 Phosphotransferase system, EIIC GG844_18250 PF00367 phosphotransferase system, EIIB GG844_18255 PF03350 Uncharacterized protein family, UPF0114 GG844_18260 PF08340 Domain of unknown function (DUF1732) GG844_18260 PF03755 YicC-like family, N-terminal region GG844_18265 PF03725 3' exoribonuclease family, domain 2 GG844_18265 PF01138 3' exoribonuclease family, domain 1 GG844_18270 PF00156 Phosphoribosyl transferase domain GG844_18275 PF03279 Bacterial lipid A biosynthesis acyltransferase GG844_18280 PF03279 Bacterial lipid A biosynthesis acyltransferase GG844_18285 PF00440 Bacterial regulatory proteins, tetR family GG844_18295 PF02441 Flavoprotein GG844_18295 PF04127 DNA / pantothenate metabolism flavoprotein GG844_18300 PF00672 HAMP domain GG844_18300 PF02743 Cache domain GG844_18300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_18305 PF04002 RadC-like JAB domain GG844_18310 PF00830 Ribosomal L28 family GG844_18315 PF00471 Ribosomal protein L33 GG844_18325 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GG844_18325 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GG844_18325 PF06827 Zinc finger found in FPG and IleRS GG844_18330 PF01467 Cytidylyltransferase-like GG844_18335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GG844_18340 PF00535 Glycosyl transferase family 2 GG844_18345 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GG844_18380 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GG844_18385 PF04488 Glycosyltransferase sugar-binding region containing DXD motif GG844_18395 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GG844_18410 PF00457 Glycosyl hydrolases family 11 GG844_18410 PF01522 Polysaccharide deacetylase GG844_18415 PF01370 NAD dependent epimerase/dehydratase family GG844_18420 PF00483 Nucleotidyl transferase GG844_18420 PF01050 Mannose-6-phosphate isomerase GG844_18425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GG844_18425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GG844_18425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GG844_18425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GG844_18430 PF16363 GDP-mannose 4,6 dehydratase GG844_18435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GG844_18450 PF00005 ABC transporter GG844_18450 PF14524 Wzt C-terminal domain GG844_18460 PF13193 AMP-binding enzyme C-terminal domain GG844_18460 PF00501 AMP-binding enzyme GG844_18465 PF00465 Iron-containing alcohol dehydrogenase GG844_18465 PF00171 Aldehyde dehydrogenase family GG844_18475 PF00132 Bacterial transferase hexapeptide (six repeats) GG844_18500 PF02719 Polysaccharide biosynthesis protein GG844_18505 PF01370 NAD dependent epimerase/dehydratase family GG844_18510 PF02397 Bacterial sugar transferase GG844_18515 PF10996 Beta-Casp domain GG844_18515 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GG844_18515 PF00753 Metallo-beta-lactamase superfamily GG844_18520 PF00924 Mechanosensitive ion channel GG844_18525 PF03167 Uracil DNA glycosylase superfamily GG844_18530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GG844_18535 PF04222 Protein of unknown function (DUF416) GG844_18540 PF01238 Phosphomannose isomerase type I GG844_18545 PF00480 ROK family GG844_18550 PF01595 Cyclin M transmembrane N-terminal domain GG844_18550 PF00571 CBS domain GG844_18555 PF00216 Bacterial DNA-binding protein GG844_18565 PF02843 Phosphoribosylglycinamide synthetase, C domain GG844_18565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GG844_18565 PF02844 Phosphoribosylglycinamide synthetase, N domain GG844_18570 PF02142 MGS-like domain GG844_18570 PF01808 AICARFT/IMPCHase bienzyme GG844_18580 PF13411 MerR HTH family regulatory protein GG844_18585 PF18500 CadC C-terminal domain 1 GG844_18585 PF00486 Transcriptional regulatory protein, C terminal GG844_18590 PF13520 Amino acid permease GG844_18595 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GG844_18595 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GG844_18595 PF01276 Orn/Lys/Arg decarboxylase, major domain GG844_18600 PF17200 Single Cache domain 2 GG844_18600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_18600 PF00672 HAMP domain GG844_18615 PF07715 TonB-dependent Receptor Plug Domain GG844_18615 PF00593 TonB dependent receptor GG844_18620 PF01081 KDPG and KHG aldolase GG844_18625 PF02447 GntP family permease GG844_18630 PF01202 Shikimate kinase GG844_18635 PF00920 Dehydratase family GG844_18640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GG844_18640 PF00356 Bacterial regulatory proteins, lacI family GG844_18650 PF13784 Fic/DOC family N-terminal GG844_18650 PF02661 Fic/DOC family GG844_18655 PF18395 Cas3 C-terminal domain GG844_18655 PF18019 HD domain GG844_18675 PF09344 CT1975-like protein GG844_18685 PF01867 CRISPR associated protein Cas1 GG844_18690 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) GG844_18720 PF02954 Bacterial regulatory protein, Fis family GG844_18725 PF01207 Dihydrouridine synthase (Dus) GG844_18735 PF00289 Biotin carboxylase, N-terminal domain GG844_18735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GG844_18735 PF02785 Biotin carboxylase C-terminal domain GG844_18740 PF00364 Biotin-requiring enzyme GG844_18745 PF01220 Dehydroquinase class II GG844_18750 PF13193 AMP-binding enzyme C-terminal domain GG844_18750 PF16177 Acetyl-coenzyme A synthetase N-terminus GG844_18750 PF00501 AMP-binding enzyme GG844_18770 PF12832 MFS_1 like family GG844_18775 PF00072 Response regulator receiver domain GG844_18775 PF09456 RcsC Alpha-Beta-Loop (ABL) GG844_18775 PF00512 His Kinase A (phospho-acceptor) domain GG844_18775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GG844_18780 PF02541 Ppx/GppA phosphatase family GG844_18785 PF00271 Helicase conserved C-terminal domain GG844_18785 PF00270 DEAD/DEAH box helicase GG844_18790 PF00085 Thioredoxin GG844_18795 PF07497 Rho termination factor, RNA-binding domain GG844_18795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GG844_18795 PF07498 Rho termination factor, N-terminal domain GG844_18805 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GG844_18810 PF00111 2Fe-2S iron-sulfur cluster binding domain GG844_18810 PF00970 Oxidoreductase FAD-binding domain GG844_18810 PF00175 Oxidoreductase NAD-binding domain GG844_18815 PF00175 Oxidoreductase NAD-binding domain GG844_18850 PF13091 PLD-like domain GG844_18860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GG844_18860 PF01565 FAD binding domain GG844_18865 PF02237 Biotin protein ligase C terminal domain GG844_18865 PF08279 HTH domain GG844_18865 PF03099 Biotin/lipoate A/B protein ligase family GG844_18870 PF00485 Phosphoribulokinase / Uridine kinase family GG844_18895 PF00009 Elongation factor Tu GTP binding domain GG844_18895 PF03143 Elongation factor Tu C-terminal domain GG844_18895 PF03144 Elongation factor Tu domain 2 GG844_18900 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GG844_18905 PF02357 Transcription termination factor nusG GG844_18905 PF00467 KOW motif GG844_18910 PF03946 Ribosomal protein L11, N-terminal domain GG844_18910 PF00298 Ribosomal protein L11, RNA binding domain GG844_18915 PF00687 Ribosomal protein L1p/L10e family GG844_18920 PF00466 Ribosomal protein L10 GG844_18925 PF00542 Ribosomal protein L7/L12 C-terminal domain GG844_18925 PF16320 Ribosomal protein L7/L12 dimerisation domain GG844_18930 PF04561 RNA polymerase Rpb2, domain 2 GG844_18930 PF04565 RNA polymerase Rpb2, domain 3 GG844_18930 PF04563 RNA polymerase beta subunit GG844_18930 PF00562 RNA polymerase Rpb2, domain 6 GG844_18930 PF10385 RNA polymerase beta subunit external 1 domain GG844_18930 PF04560 RNA polymerase Rpb2, domain 7 GG844_18935 PF04983 RNA polymerase Rpb1, domain 3 GG844_18935 PF04997 RNA polymerase Rpb1, domain 1 GG844_18935 PF00623 RNA polymerase Rpb1, domain 2 GG844_18935 PF05000 RNA polymerase Rpb1, domain 4 GG844_18935 PF04998 RNA polymerase Rpb1, domain 5 GG844_18940 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GG844_18945 PF09297 NADH pyrophosphatase zinc ribbon domain GG844_18945 PF00293 NUDIX domain GG844_18950 PF01208 Uroporphyrinogen decarboxylase (URO-D) GG844_18955 PF00440 Bacterial regulatory proteins, tetR family GG844_18955 PF08360 QacR-like protein, C-terminal region GG844_18965 PF01551 Peptidase family M23 GG844_18970 PF01676 Metalloenzyme superfamily GG844_18970 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GG844_18980 PF02080 TrkA-C domain GG844_18980 PF03600 Citrate transporter GG844_18985 PF02666 Phosphatidylserine decarboxylase GG844_18990 PF03193 RsgA GTPase GG844_18995 PF00929 Exonuclease GG844_19040 PF08331 Domain of unknown function (DUF1730) GG844_19045 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GG844_19050 PF01520 N-acetylmuramoyl-L-alanine amidase GG844_19055 PF08676 MutL C terminal dimerisation domain GG844_19055 PF01119 DNA mismatch repair protein, C-terminal domain GG844_19065 PF17209 Hfq protein GG844_19070 PF13167 GTP-binding GTPase N-terminal GG844_19070 PF01926 50S ribosome-binding GTPase GG844_19070 PF16360 GTP-binding GTPase Middle Region GG844_19075 PF01145 SPFH domain / Band 7 family GG844_19075 PF12221 Bacterial membrane protein N terminal GG844_19080 PF01145 SPFH domain / Band 7 family GG844_19085 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GG844_19090 PF04102 SlyX GG844_19100 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GG844_19100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GG844_19105 PF08348 YheO-like PAS domain GG844_19105 PF13309 HTH domain GG844_19110 PF02635 DsrE/DsrF-like family GG844_19115 PF02635 DsrE/DsrF-like family GG844_19125 PF00164 Ribosomal protein S12/S23 GG844_19130 PF00177 Ribosomal protein S7p/S5e GG844_19135 PF03144 Elongation factor Tu domain 2 GG844_19135 PF00009 Elongation factor Tu GTP binding domain GG844_19135 PF00679 Elongation factor G C-terminus GG844_19135 PF14492 Elongation Factor G, domain II GG844_19135 PF03764 Elongation factor G, domain IV GG844_19140 PF03144 Elongation factor Tu domain 2 GG844_19140 PF00009 Elongation factor Tu GTP binding domain GG844_19140 PF03143 Elongation factor Tu C-terminal domain GG844_19145 PF04324 BFD-like [2Fe-2S] binding domain GG844_19150 PF00210 Ferritin-like domain GG844_19155 PF01250 Ribosomal protein S6 GG844_19160 PF00436 Single-strand binding protein family GG844_19165 PF01084 Ribosomal protein S18 GG844_19170 PF01281 Ribosomal protein L9, N-terminal domain GG844_19170 PF03948 Ribosomal protein L9, C-terminal domain GG844_19180 PF03796 DnaB-like helicase C terminal domain GG844_19180 PF00772 DnaB-like helicase N terminal domain GG844_19185 PF00842 Alanine racemase, C-terminal domain GG844_19185 PF01168 Alanine racemase, N-terminal domain GG844_19190 PF01894 Uncharacterised protein family UPF0047 GG844_19195 PF00342 Phosphoglucose isomerase GG844_19200 PF12706 Beta-lactamase superfamily domain GG844_19210 PF01475 Ferric uptake regulator family GG844_19215 PF01207 Dihydrouridine synthase (Dus) GG844_19220 PF09583 Phage shock protein G (Phageshock_PspG) GG844_19240 PF00667 FAD binding domain GG844_19240 PF00175 Oxidoreductase NAD-binding domain GG844_19240 PF00258 Flavodoxin GG844_19245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GG844_19245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GG844_19250 PF01507 Phosphoadenosine phosphosulfate reductase family GG844_19285 PF00999 Sodium/hydrogen exchanger family GG844_19290 PF00809 Pterin binding enzyme GG844_19290 PF02574 Homocysteine S-methyltransferase GG844_19290 PF02965 Vitamin B12 dependent methionine synthase, activation domain GG844_19290 PF02607 B12 binding domain GG844_19290 PF02310 B12 binding domain GG844_19295 PF00696 Amino acid kinase family GG844_19295 PF01842 ACT domain GG844_19300 PF00266 Aminotransferase class-V GG844_19310 PF17760 UvrA interaction domain GG844_19310 PF17755 UvrA DNA-binding domain GG844_19310 PF00005 ABC transporter GG844_19315 PF00483 Nucleotidyl transferase GG844_19320 PF00196 Bacterial regulatory proteins, luxR family GG844_19325 PF00436 Single-strand binding protein family GG844_19330 PF17157 Gammaproteobacterial periplasmic sensor domain GG844_19330 PF00990 Diguanylate cyclase, GGDEF domain GG844_19330 PF00563 EAL domain GG844_19350 PF11741 AMIN domain GG844_19350 PF07660 Secretin and TonB N terminus short domain GG844_19350 PF03958 Bacterial type II/III secretion system short domain GG844_19350 PF00263 Bacterial type II and III secretion system protein GG844_19355 PF01471 Putative peptidoglycan binding domain GG844_19355 PF13401 AAA domain GG844_19365 PF00437 Type II/IV secretion system protein GG844_19370 PF00482 Type II secretion system (T2SS), protein F GG844_19380 PF00114 Pilin (bacterial filament) GG844_19380 PF07963 Prokaryotic N-terminal methylation motif GG844_19385 PF07963 Prokaryotic N-terminal methylation motif GG844_19385 PF00114 Pilin (bacterial filament) GG844_19420 PF04085 rod shape-determining protein MreC GG844_19425 PF04093 rod shape-determining protein MreD GG844_19430 PF02545 Maf-like protein GG844_19435 PF00575 S1 RNA binding domain GG844_19435 PF10150 Ribonuclease E/G family GG844_19440 PF13502 AsmA-like C-terminal region GG844_19440 PF13116 Protein of unknown function GG844_19445 PF00795 Carbon-nitrogen hydrolase GG844_19450 PF01523 Putative modulator of DNA gyrase GG844_19460 PF06877 Regulator of ribonuclease activity B GG844_19475 PF00582 Universal stress protein family GG844_19485 PF16868 NMT1-like family GG844_19490 PF01316 Arginine repressor, DNA binding domain GG844_19490 PF02863 Arginine repressor, C-terminal domain GG844_19495 PF00056 lactate/malate dehydrogenase, NAD binding domain GG844_19495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GG844_19500 PF13520 Amino acid permease GG844_19505 PF00348 Polyprenyl synthetase GG844_19510 PF00829 Ribosomal prokaryotic L21 protein GG844_19515 PF01016 Ribosomal L27 protein GG844_19520 PF01926 50S ribosome-binding GTPase GG844_19520 PF01018 GTP1/OBG GG844_19525 PF06738 Putative threonine/serine exporter GG844_19530 PF12821 Threonine/Serine exporter, ThrE GG844_19535 PF00186 Dihydrofolate reductase GG844_19540 PF00149 Calcineurin-like phosphoesterase GG844_19545 PF04379 ApaG domain GG844_19550 PF00398 Ribosomal RNA adenine dimethylase GG844_19555 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GG844_19560 PF09312 SurA N-terminal domain GG844_19565 PF03968 OstA-like protein GG844_19565 PF04453 LPS transport system D GG844_19570 PF05099 Tellurite resistance protein TerB GG844_19570 PF00226 DnaJ domain GG844_19600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GG844_19600 PF00672 HAMP domain GG844_19600 PF12729 Four helix bundle sensory module for signal transduction