locus-tag class description N4267_00005 PF00308 Bacterial dnaA protein N4267_00005 PF08299 Bacterial dnaA protein helix-turn-helix N4267_00005 PF11638 DnaA N-terminal domain N4267_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain N4267_00010 PF02767 DNA polymerase III beta subunit, central domain N4267_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain N4267_00015 PF02463 RecF/RecN/SMC N terminal domain N4267_00020 PF01751 Toprim domain N4267_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_00020 PF00986 DNA gyrase B subunit, carboxyl terminus N4267_00020 PF00204 DNA gyrase B N4267_00020 PF18053 DNA gyrase B subunit insert domain N4267_00030 PF00011 Hsp20/alpha crystallin family N4267_00035 PF00155 Aminotransferase class I and II N4267_00040 PF02092 Glycyl-tRNA synthetase beta subunit N4267_00040 PF05746 DALR anticodon binding domain N4267_00045 PF02091 Glycyl-tRNA synthetase alpha subunit N4267_00050 PF01169 Uncharacterized protein family UPF0016 N4267_00060 PF01206 Sulfurtransferase TusA N4267_00070 PF08240 Alcohol dehydrogenase GroES-like domain N4267_00070 PF00107 Zinc-binding dehydrogenase N4267_00075 PF00291 Pyridoxal-phosphate dependent enzyme N4267_00075 PF00585 C-terminal regulatory domain of Threonine dehydratase N4267_00080 PF00920 Dehydratase family N4267_00085 PF01063 Amino-transferase class IV N4267_00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4267_00095 PF00205 Thiamine pyrophosphate enzyme, central domain N4267_00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4267_00100 PF01078 Magnesium chelatase, subunit ChlI N4267_00100 PF13335 Magnesium chelatase, subunit ChlI C-terminal N4267_00105 PF01553 Acyltransferase N4267_00110 PF01323 DSBA-like thioredoxin domain N4267_00115 PF01636 Phosphotransferase enzyme family N4267_00120 PF13746 4Fe-4S dicluster domain N4267_00120 PF12801 4Fe-4S binding domain N4267_00120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase N4267_00125 PF06288 Protein of unknown function (DUF1040) N4267_00130 PF07070 SpoOM protein N4267_00135 PF03006 Haemolysin-III related N4267_00145 PF02386 Cation transport protein N4267_00150 PF02080 TrkA-C domain N4267_00150 PF02254 TrkA-N domain N4267_00155 PF01189 16S rRNA methyltransferase RsmB/F N4267_00155 PF01029 NusB family N4267_00160 PF00551 Formyl transferase N4267_00160 PF02911 Formyl transferase, C-terminal domain N4267_00165 PF01327 Polypeptide deformylase N4267_00170 PF01476 LysM domain N4267_00175 PF02481 DNA recombination-mediator protein A N4267_00175 PF17782 DprA winged helix domain N4267_00180 PF04361 Protein of unknown function (DUF494) N4267_00185 PF01396 Topoisomerase DNA binding C4 zinc finger N4267_00190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N4267_00190 PF02222 ATP-grasp domain N4267_00195 PF00731 AIR carboxylase N4267_00200 PF01300 Telomere recombination N4267_00205 PF01218 Coproporphyrinogen III oxidase N4267_00210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N4267_00210 PF01488 Shikimate / quinate 5-dehydrogenase N4267_00210 PF08501 Shikimate dehydrogenase substrate binding domain N4267_00220 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_00260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N4267_00265 PF13667 ThiC-associated domain N4267_00265 PF01964 Radical SAM ThiC family N4267_00270 PF02581 Thiamine monophosphate synthase N4267_00275 PF00899 ThiF family N4267_00280 PF02597 ThiS family N4267_00285 PF05690 Thiazole biosynthesis protein ThiG N4267_00290 PF06968 Biotin and Thiamin Synthesis associated domain N4267_00290 PF04055 Radical SAM superfamily N4267_00295 PF01321 Creatinase/Prolidase N-terminal domain N4267_00295 PF00557 Metallopeptidase family M24 N4267_00295 PF01321 Creatinase/Prolidase N-terminal domain N4267_00295 PF00557 Metallopeptidase family M24 N4267_00300 PF03466 LysR substrate binding domain N4267_00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_00305 PF07690 Major Facilitator Superfamily N4267_00315 PF01037 Lrp/AsnC ligand binding domain N4267_00320 PF00563 EAL domain N4267_00320 PF00990 Diguanylate cyclase, GGDEF domain N4267_00320 PF08448 PAS fold N4267_00325 PF04445 Putative SAM-dependent methyltransferase N4267_00335 PF00892 EamA-like transporter family N4267_00340 PF00582 Universal stress protein family N4267_00345 PF00210 Ferritin-like domain N4267_00350 PF10625 Universal stress protein B (UspB) N4267_00365 PF02646 RmuC family N4267_00370 PF01209 ubiE/COQ5 methyltransferase family N4267_00375 PF02036 SCP-2 sterol transfer family N4267_00380 PF03109 ABC1 family N4267_00385 PF02416 mttA/Hcf106 family N4267_00390 PF02416 mttA/Hcf106 family N4267_00395 PF00902 Sec-independent protein translocase protein (TatC) N4267_00400 PF03150 Di-haem cytochrome c peroxidase N4267_00400 PF00034 Cytochrome c N4267_00405 PF01554 MatE N4267_00415 PF00717 Peptidase S24-like N4267_00415 PF01726 LexA DNA binding domain N4267_00420 PF01553 Acyltransferase N4267_00425 PF01040 UbiA prenyltransferase family N4267_00430 PF04345 Chorismate lyase N4267_00435 PF03748 Flagellar basal body-associated protein FliL N4267_00440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_00440 PF02203 Tar ligand binding domain homologue N4267_00440 PF00672 HAMP domain N4267_00445 PF01694 Rhomboid family N4267_00445 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease N4267_00450 PF00581 Rhodanese-like domain N4267_00455 PF01026 TatD related DNase N4267_00460 PF00490 Delta-aminolevulinic acid dehydratase N4267_00470 PF00476 DNA polymerase family A N4267_00470 PF01367 5'-3' exonuclease, C-terminal SAM fold N4267_00470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N4267_00470 PF01612 3'-5' exonuclease N4267_00475 PF01926 50S ribosome-binding GTPase N4267_00480 PF00034 Cytochrome c N4267_00490 PF04220 Der GTPase activator (YihI) N4267_00495 PF10675 Protein of unknown function (DUF2489) N4267_00500 PF04055 Radical SAM superfamily N4267_00500 PF06969 HemN C-terminal domain N4267_00505 PF07219 HemY protein N-terminus N4267_00510 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase N4267_00515 PF02602 Uroporphyrinogen-III synthase HemD N4267_00520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N4267_00520 PF03900 Porphobilinogen deaminase, C-terminal domain N4267_00525 PF12633 Adenylate cyclase NT domain N4267_00525 PF01295 Adenylate cyclase, class-I N4267_00530 PF01491 Frataxin-like domain N4267_00540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N4267_00540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N4267_00545 PF01678 Diaminopimelate epimerase N4267_00550 PF04340 Protein of unknown function, DUF484 N4267_00555 PF00589 Phage integrase family N4267_00555 PF02899 Phage integrase, N-terminal SAM-like domain N4267_00560 PF13419 Haloacid dehalogenase-like hydrolase N4267_00565 PF00563 EAL domain N4267_00565 PF08495 FIST N domain N4267_00565 PF00990 Diguanylate cyclase, GGDEF domain N4267_00565 PF10442 FIST C domain N4267_00585 PF12146 Serine aminopeptidase, S33 N4267_00590 PF01810 LysE type translocator N4267_00595 PF00563 EAL domain N4267_00595 PF08668 HDOD domain N4267_00600 PF00210 Ferritin-like domain N4267_00635 PF02881 SRP54-type protein, helical bundle domain N4267_00635 PF00448 SRP54-type protein, GTPase domain N4267_00640 PF00005 ABC transporter N4267_00645 PF18075 FtsX extracellular domain N4267_00650 PF00140 Sigma-70 factor, region 1.2 N4267_00650 PF04542 Sigma-70 region 2 N4267_00650 PF04545 Sigma-70, region 4 N4267_00655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4267_00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_00660 PF00440 Bacterial regulatory proteins, tetR family N4267_00670 PF05958 tRNA (Uracil-5-)-methyltransferase N4267_00675 PF07715 TonB-dependent Receptor Plug Domain N4267_00675 PF00593 TonB dependent receptor N4267_00680 PF04151 Bacterial pre-peptidase C-terminal domain N4267_00680 PF00082 Subtilase family N4267_00680 PF05922 Peptidase inhibitor I9 N4267_00685 PF01177 Asp/Glu/Hydantoin racemase N4267_00730 PF00962 Adenosine/AMP deaminase N4267_00735 PF00990 Diguanylate cyclase, GGDEF domain N4267_00735 PF13188 PAS domain N4267_00735 PF03707 Bacterial signalling protein N terminal repeat N4267_00735 PF00563 EAL domain N4267_00740 PF00158 Sigma-54 interaction domain N4267_00740 PF00072 Response regulator receiver domain N4267_00740 PF02954 Bacterial regulatory protein, Fis family N4267_00745 PF00989 PAS fold N4267_00745 PF00512 His Kinase A (phospho-acceptor) domain N4267_00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_00755 PF03951 Glutamine synthetase, beta-Grasp domain N4267_00755 PF00120 Glutamine synthetase, catalytic domain N4267_00765 PF00679 Elongation factor G C-terminus N4267_00765 PF00009 Elongation factor Tu GTP binding domain N4267_00765 PF03144 Elongation factor Tu domain 2 N4267_00775 PF03631 Virulence factor BrkB N4267_00780 PF02580 D-Tyr-tRNA(Tyr) deacylase N4267_00785 PF09500 Putative thioesterase (yiiD_Cterm) N4267_00785 PF00583 Acetyltransferase (GNAT) family N4267_00795 PF01293 Phosphoenolpyruvate carboxykinase N4267_00800 PF01430 Hsp33 protein N4267_00805 PF01479 S4 domain N4267_00810 PF11356 Type II secretion system protein C N4267_00815 PF00263 Bacterial type II and III secretion system protein N4267_00815 PF03958 Bacterial type II/III secretion system short domain N4267_00820 PF00437 Type II/IV secretion system protein N4267_00825 PF00482 Type II secretion system (T2SS), protein F N4267_00830 PF08334 Type II secretion system (T2SS), protein G N4267_00830 PF07963 Prokaryotic N-terminal methylation motif N4267_00835 PF12019 Type II transport protein GspH N4267_00840 PF02501 Type II secretion system (T2SS), protein I N4267_00840 PF07963 Prokaryotic N-terminal methylation motif N4267_00845 PF11612 Type II secretion system (T2SS), protein J N4267_00845 PF07963 Prokaryotic N-terminal methylation motif N4267_00850 PF03934 Type II secretion system (T2SS), protein K N4267_00855 PF05134 Type II secretion system (T2SS), protein L N4267_00855 PF12693 GspL periplasmic domain N4267_00860 PF04612 Type II secretion system (T2SS), protein M N4267_00865 PF01203 Type II secretion system (T2SS), protein N N4267_00870 PF00459 Inositol monophosphatase family N4267_00875 PF00293 NUDIX domain N4267_00880 PF01521 Iron-sulphur cluster biosynthesis N4267_00880 PF01106 NifU-like domain N4267_00885 PF00156 Phosphoribosyl transferase domain N4267_00895 PF00561 alpha/beta hydrolase fold N4267_00905 PF17674 HHH domain N4267_00905 PF00575 S1 RNA binding domain N4267_00905 PF16921 Tex protein YqgF-like domain N4267_00905 PF09371 Tex-like protein N-terminal domain N4267_00910 PF01272 Transcription elongation factor, GreA/GreB, C-term N4267_00910 PF03449 Transcription elongation factor, N-terminal N4267_00915 PF17152 Periplasmic sensor domain N4267_00915 PF00990 Diguanylate cyclase, GGDEF domain N4267_00920 PF00072 Response regulator receiver domain N4267_00920 PF00486 Transcriptional regulatory protein, C terminal N4267_00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_00925 PF00512 His Kinase A (phospho-acceptor) domain N4267_00925 PF00672 HAMP domain N4267_00930 PF00860 Permease family N4267_00935 PF00271 Helicase conserved C-terminal domain N4267_00935 PF17191 RecG wedge domain N4267_00935 PF00270 DEAD/DEAH box helicase N4267_00940 PF04607 Region found in RelA / SpoT proteins N4267_00940 PF02824 TGS domain N4267_00940 PF13291 ACT domain N4267_00945 PF01192 RNA polymerase Rpb6 N4267_00950 PF00625 Guanylate kinase N4267_00955 PF02592 Putative vitamin uptake transporter N4267_00960 PF00474 Sodium:solute symporter family N4267_00970 PF00999 Sodium/hydrogen exchanger family N4267_00970 PF02080 TrkA-C domain N4267_00970 PF03471 Transporter associated domain N4267_00975 PF00196 Bacterial regulatory proteins, luxR family N4267_00975 PF00072 Response regulator receiver domain N4267_00980 PF11412 Disulphide bond corrector protein DsbC N4267_00980 PF02683 Cytochrome C biogenesis protein transmembrane region N4267_00985 PF17967 Pullulanase N2 domain N4267_00985 PF18494 Pullulanase Ins domain N4267_00985 PF03714 Bacterial pullanase-associated domain N4267_00985 PF11852 Domain of unknown function (DUF3372) N4267_00985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N4267_00990 PF03605 Anaerobic c4-dicarboxylate membrane transporter N4267_00995 PF10415 Fumarase C C-terminus N4267_00995 PF00206 Lyase N4267_01000 PF00990 Diguanylate cyclase, GGDEF domain N4267_01000 PF17158 Membrane-associated sensor, integral membrane domain N4267_01005 PF04186 FxsA cytoplasmic membrane protein N4267_01010 PF00588 SpoU rRNA Methylase family N4267_01015 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N4267_01015 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N4267_01020 PF00512 His Kinase A (phospho-acceptor) domain N4267_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_01020 PF16527 Two-component sensor protein CpxA, periplasmic domain N4267_01020 PF00672 HAMP domain N4267_01025 PF00486 Transcriptional regulatory protein, C terminal N4267_01025 PF00072 Response regulator receiver domain N4267_01035 PF16916 Dimerisation domain of Zinc Transporter N4267_01035 PF01545 Cation efflux family N4267_01040 PF00365 Phosphofructokinase N4267_01045 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N4267_01050 PF06005 Cell division protein ZapB N4267_01055 PF02219 Methylenetetrahydrofolate reductase N4267_01060 PF00696 Amino acid kinase family N4267_01060 PF03447 Homoserine dehydrogenase, NAD binding domain N4267_01060 PF00742 Homoserine dehydrogenase N4267_01065 PF01053 Cys/Met metabolism PLP-dependent enzyme N4267_01070 PF01340 Met Apo-repressor, MetJ N4267_01075 PF00390 Malic enzyme, N-terminal domain N4267_01075 PF03949 Malic enzyme, NAD binding domain N4267_01080 PF01197 Ribosomal protein L31 N4267_01085 PF00271 Helicase conserved C-terminal domain N4267_01085 PF00270 DEAD/DEAH box helicase N4267_01085 PF18074 Primosomal protein N C-terminal domain N4267_01085 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N4267_01085 PF17764 3′ DNA-binding domain (3′BD) N4267_01090 PF00356 Bacterial regulatory proteins, lacI family N4267_01095 PF05036 Sporulation related domain N4267_01100 PF00227 Proteasome subunit N4267_01105 PF00004 ATPase family associated with various cellular activities (AAA) N4267_01105 PF07724 AAA domain (Cdc48 subfamily) N4267_01105 PF10431 C-terminal, D2-small domain, of ClpB protein N4267_01110 PF01040 UbiA prenyltransferase family N4267_01115 PF03737 Aldolase/RraA N4267_01120 PF01554 MatE N4267_01125 PF00121 Triosephosphate isomerase N4267_01145 PF00455 DeoR C terminal sensor domain N4267_01145 PF08220 DeoR-like helix-turn-helix domain N4267_01150 PF00166 Chaperonin 10 Kd subunit N4267_01155 PF00118 TCP-1/cpn60 chaperonin family N4267_01165 PF04055 Radical SAM superfamily N4267_01170 PF09285 Elongation factor P, C-terminal N4267_01170 PF08207 Elongation factor P (EF-P) KOW-like domain N4267_01170 PF01132 Elongation factor P (EF-P) OB domain N4267_01175 PF02313 Fumarate reductase subunit D N4267_01180 PF02300 Fumarate reductase subunit C N4267_01185 PF13085 2Fe-2S iron-sulfur cluster binding domain N4267_01185 PF13183 4Fe-4S dicluster domain N4267_01190 PF00890 FAD binding domain N4267_01190 PF02910 Fumarate reductase flavoprotein C-term N4267_01195 PF00152 tRNA synthetases class II (D, K and N) N4267_01200 PF00581 Rhodanese-like domain N4267_01205 PF02556 Preprotein translocase subunit SecB N4267_01210 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N4267_01210 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N4267_01215 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_01215 PF06426 Serine acetyltransferase, N-terminal N4267_01225 PF00311 Phosphoenolpyruvate carboxylase N4267_01230 PF07687 Peptidase dimerisation domain N4267_01230 PF01546 Peptidase family M20/M25/M40 N4267_01235 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4267_01235 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4267_01240 PF00696 Amino acid kinase family N4267_01245 PF00764 Arginosuccinate synthase N4267_01250 PF14698 Argininosuccinate lyase C-terminal N4267_01250 PF00206 Lyase N4267_01260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4267_01260 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_01265 PF08534 Redoxin N4267_01265 PF00462 Glutaredoxin N4267_01270 PF03466 LysR substrate binding domain N4267_01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_01275 PF00905 Penicillin binding protein transpeptidase domain N4267_01275 PF00912 Transglycosylase N4267_01275 PF17092 Penicillin-binding protein OB-like domain N4267_01295 PF04351 Pilus assembly protein, PilP N4267_01300 PF07660 Secretin and TonB N terminus short domain N4267_01300 PF03958 Bacterial type II/III secretion system short domain N4267_01300 PF11741 AMIN domain N4267_01300 PF00263 Bacterial type II and III secretion system protein N4267_01305 PF01202 Shikimate kinase N4267_01310 PF01761 3-dehydroquinate synthase N4267_01320 PF02086 D12 class N6 adenine-specific DNA methyltransferase N4267_01325 PF00834 Ribulose-phosphate 3 epimerase family N4267_01330 PF13419 Haloacid dehalogenase-like hydrolase N4267_01335 PF00579 tRNA synthetases class I (W and Y) N4267_01350 PF04055 Radical SAM superfamily N4267_01350 PF18693 TRAM domain N4267_01350 PF00919 Uncharacterized protein family UPF0004 N4267_01355 PF00117 Glutamine amidotransferase class-I N4267_01360 PF00202 Aminotransferase class-III N4267_01365 PF04958 Arginine N-succinyltransferase beta subunit N4267_01370 PF00171 Aldehyde dehydrogenase family N4267_01380 PF13545 Crp-like helix-turn-helix domain N4267_01380 PF00027 Cyclic nucleotide-binding domain N4267_01385 PF00485 Phosphoribulokinase / Uridine kinase family N4267_01390 PF06794 Uncharacterised protein family (UPF0270) N4267_01395 PF00561 alpha/beta hydrolase fold N4267_01405 PF00005 ABC transporter N4267_01405 PF12848 ABC transporter N4267_01410 PF02525 Flavodoxin-like fold N4267_01415 PF00999 Sodium/hydrogen exchanger family N4267_01415 PF02254 TrkA-N domain N4267_01425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4267_01430 PF01112 Asparaginase N4267_01435 PF00709 Adenylosuccinate synthetase N4267_01440 PF08238 Sel1 repeat N4267_01445 PF00884 Sulfatase N4267_01445 PF11893 Domain of unknown function (DUF3413) N4267_01450 PF17876 Cold shock domain N4267_01450 PF08461 Ribonuclease R winged-helix domain N4267_01450 PF08206 Ribonuclease B OB domain N4267_01450 PF00773 RNB domain N4267_01450 PF00575 S1 RNA binding domain N4267_01455 PF00588 SpoU rRNA Methylase family N4267_01455 PF08032 RNA 2'-O ribose methyltransferase substrate binding N4267_01460 PF00338 Ribosomal protein S10p/S20e N4267_01465 PF00297 Ribosomal protein L3 N4267_01470 PF00573 Ribosomal protein L4/L1 family N4267_01475 PF00276 Ribosomal protein L23 N4267_01480 PF00181 Ribosomal Proteins L2, RNA binding domain N4267_01480 PF03947 Ribosomal Proteins L2, C-terminal domain N4267_01485 PF00203 Ribosomal protein S19 N4267_01490 PF00237 Ribosomal protein L22p/L17e N4267_01495 PF07650 KH domain N4267_01495 PF00189 Ribosomal protein S3, C-terminal domain N4267_01500 PF00252 Ribosomal protein L16p/L10e N4267_01505 PF00831 Ribosomal L29 protein N4267_01510 PF00366 Ribosomal protein S17 N4267_01515 PF00238 Ribosomal protein L14p/L23e N4267_01520 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N4267_01520 PF00467 KOW motif N4267_01525 PF00281 Ribosomal protein L5 N4267_01525 PF00673 ribosomal L5P family C-terminus N4267_01530 PF00253 Ribosomal protein S14p/S29e N4267_01535 PF00410 Ribosomal protein S8 N4267_01540 PF00347 Ribosomal protein L6 N4267_01545 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N4267_01550 PF00333 Ribosomal protein S5, N-terminal domain N4267_01550 PF03719 Ribosomal protein S5, C-terminal domain N4267_01555 PF00327 Ribosomal protein L30p/L7e N4267_01560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N4267_01565 PF00344 SecY translocase N4267_01570 PF00444 Ribosomal protein L36 N4267_01575 PF00416 Ribosomal protein S13/S18 N4267_01580 PF00411 Ribosomal protein S11 N4267_01585 PF01479 S4 domain N4267_01585 PF00163 Ribosomal protein S4/S9 N-terminal domain N4267_01590 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N4267_01590 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N4267_01590 PF01000 RNA polymerase Rpb3/RpoA insert domain N4267_01595 PF01196 Ribosomal protein L17 N4267_01605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4267_01605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4267_01610 PF04225 Opacity-associated protein A LysM-like domain N4267_01610 PF08525 Opacity-associated protein A N-terminal motif N4267_01615 PF00892 EamA-like transporter family N4267_01620 PF13673 Acetyltransferase (GNAT) domain N4267_01625 PF03880 DbpA RNA binding domain N4267_01625 PF00270 DEAD/DEAH box helicase N4267_01625 PF00271 Helicase conserved C-terminal domain N4267_01635 PF00149 Calcineurin-like phosphoesterase N4267_01635 PF02872 5'-nucleotidase, C-terminal domain N4267_01640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4267_01640 PF14824 Sirohaem biosynthesis protein central N4267_01640 PF10414 Sirohaem synthase dimerisation region N4267_01650 PF00009 Elongation factor Tu GTP binding domain N4267_01675 PF00005 ABC transporter N4267_01685 PF10795 Protein of unknown function (DUF2607) N4267_01690 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) N4267_01695 PF01625 Peptide methionine sulfoxide reductase N4267_01700 PF01103 Surface antigen N4267_01700 PF17243 POTRA domain TamA domain 1 N4267_01700 PF07244 Surface antigen variable number repeat N4267_01705 PF04357 TamB, inner membrane protein subunit of TAM complex N4267_01710 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like N4267_01715 PF00719 Inorganic pyrophosphatase N4267_01720 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N4267_01725 PF01225 Mur ligase family, catalytic domain N4267_01725 PF08245 Mur ligase middle domain N4267_01725 PF02875 Mur ligase family, glutamate ligase domain N4267_01730 PF02441 Flavoprotein N4267_01740 PF00528 Binding-protein-dependent transport system inner membrane component N4267_01745 PF00005 ABC transporter N4267_01750 PF04751 Protein of unknown function (DUF615) N4267_01755 PF01523 Putative modulator of DNA gyrase N4267_01760 PF03448 MgtE intracellular N domain N4267_01760 PF01769 Divalent cation transporter N4267_01760 PF00571 CBS domain N4267_01765 PF00381 PTS HPr component phosphorylation site N4267_01770 PF03668 P-loop ATPase protein family N4267_01775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N4267_01780 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N4267_01785 PF04963 Sigma-54 factor, core binding domain N4267_01785 PF00309 Sigma-54 factor, Activator interacting domain (AID) N4267_01785 PF04552 Sigma-54, DNA binding domain N4267_01790 PF00005 ABC transporter N4267_01790 PF12399 Branched-chain amino acid ATP-binding cassette transporter N4267_01795 PF03968 OstA-like protein N4267_01810 PF00571 CBS domain N4267_01810 PF01380 SIS domain N4267_01815 PF01699 Sodium/calcium exchanger protein N4267_01820 PF00005 ABC transporter N4267_01825 PF02405 Permease MlaE N4267_01830 PF02470 MlaD protein N4267_01835 PF05494 MlaC protein N4267_01845 PF01722 BolA-like protein N4267_01850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N4267_01855 PF01553 Acyltransferase N4267_01860 PF01042 Endoribonuclease L-PSP N4267_01865 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain N4267_01865 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain N4267_01870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N4267_01870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N4267_01875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N4267_01875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N4267_01880 PF02562 PhoH-like protein N4267_01880 PF13638 PIN domain N4267_01885 PF18337 RapA N-terminal Tudor like domain N4267_01885 PF00176 SNF2 family N-terminal domain N4267_01885 PF12137 RNA polymerase recycling family C-terminal N4267_01885 PF00271 Helicase conserved C-terminal domain N4267_01885 PF18339 RapA N-terminal Tudor like domain 1 N4267_01890 PF00849 RNA pseudouridylate synthase N4267_01895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4267_01895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4267_01900 PF10458 Valyl tRNA synthetase tRNA binding arm N4267_01900 PF00133 tRNA synthetases class I (I, L, M and V) N4267_01900 PF08264 Anticodon-binding domain of tRNA N4267_01905 PF04364 DNA polymerase III chi subunit, HolC N4267_01910 PF00883 Cytosol aminopeptidase family, catalytic domain N4267_01910 PF02789 Cytosol aminopeptidase family, N-terminal domain N4267_01915 PF03739 Lipopolysaccharide export system permease LptF/LptG N4267_01920 PF03739 Lipopolysaccharide export system permease LptF/LptG N4267_01935 PF00072 Response regulator receiver domain N4267_01975 PF00694 Aconitase C-terminal domain N4267_01980 PF00330 Aconitase family (aconitate hydratase) N4267_01985 PF00180 Isocitrate/isopropylmalate dehydrogenase N4267_01990 PF00682 HMGL-like N4267_01990 PF08502 LeuA allosteric (dimerisation) domain N4267_01995 PF01569 PAP2 superfamily N4267_02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_02005 PF03466 LysR substrate binding domain N4267_02010 PF00501 AMP-binding enzyme N4267_02015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4267_02015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4267_02015 PF00205 Thiamine pyrophosphate enzyme, central domain N4267_02020 PF10369 Small subunit of acetolactate synthase N4267_02025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4267_02025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4267_02025 PF01842 ACT domain N4267_02030 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N4267_02035 PF01812 5-formyltetrahydrofolate cyclo-ligase family N4267_02045 PF05164 Cell division protein ZapA N4267_02050 PF03695 Uncharacterised protein family (UPF0149) N4267_02055 PF01494 FAD binding domain N4267_02060 PF01494 FAD binding domain N4267_02075 PF03937 Flavinator of succinate dehydrogenase N4267_02085 PF00890 FAD binding domain N4267_02085 PF02910 Fumarate reductase flavoprotein C-term N4267_02090 PF04542 Sigma-70 region 2 N4267_02090 PF08281 Sigma-70, region 4 N4267_02095 PF03872 Anti sigma-E protein RseA, N-terminal domain N4267_02095 PF03873 Anti sigma-E protein RseA, C-terminal domain N4267_02100 PF03888 MucB/RseB N-terminal domain N4267_02100 PF17188 MucB/RseB C-terminal domain N4267_02110 PF00679 Elongation factor G C-terminus N4267_02110 PF00009 Elongation factor Tu GTP binding domain N4267_02110 PF03144 Elongation factor Tu domain 2 N4267_02110 PF06421 GTP-binding protein LepA C-terminus N4267_02115 PF10502 Signal peptidase, peptidase S26 N4267_02120 PF00035 Double-stranded RNA binding motif N4267_02120 PF14622 Ribonuclease-III-like N4267_02125 PF07650 KH domain N4267_02125 PF01926 50S ribosome-binding GTPase N4267_02130 PF02565 Recombination protein O C terminal N4267_02130 PF11967 Recombination protein O N terminal N4267_02135 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N4267_02140 PF01648 4'-phosphopantetheinyl transferase superfamily N4267_02155 PF00990 Diguanylate cyclase, GGDEF domain N4267_02160 PF00072 Response regulator receiver domain N4267_02160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N4267_02160 PF00512 His Kinase A (phospho-acceptor) domain N4267_02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_02160 PF01627 Hpt domain N4267_02160 PF00672 HAMP domain N4267_02165 PF01938 TRAM domain N4267_02165 PF05958 tRNA (Uracil-5-)-methyltransferase N4267_02170 PF13291 ACT domain N4267_02170 PF04607 Region found in RelA / SpoT proteins N4267_02170 PF02824 TGS domain N4267_02175 PF03819 MazG nucleotide pyrophosphohydrolase domain N4267_02180 PF06418 CTP synthase N-terminus N4267_02180 PF00117 Glutamine amidotransferase class-I N4267_02185 PF00113 Enolase, C-terminal TIM barrel domain N4267_02185 PF03952 Enolase, N-terminal domain N4267_02190 PF01966 HD domain N4267_02190 PF01743 Poly A polymerase head domain N4267_02190 PF12627 Probable RNA and SrmB- binding site of polymerase A N4267_02195 PF13401 AAA domain N4267_02195 PF01471 Putative peptidoglycan binding domain N4267_02205 PF08239 Bacterial SH3 domain N4267_02210 PF01384 Phosphate transporter family N4267_02215 PF01865 Protein of unknown function DUF47 N4267_02220 PF01928 CYTH domain N4267_02225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_02225 PF02743 Cache domain N4267_02225 PF00672 HAMP domain N4267_02230 PF03710 Glutamate-ammonia ligase adenylyltransferase N4267_02230 PF08335 GlnD PII-uridylyltransferase N4267_02235 PF01467 Cytidylyltransferase-like N4267_02235 PF00294 pfkB family carbohydrate kinase N4267_02240 PF02321 Outer membrane efflux protein N4267_02245 PF00293 NUDIX domain N4267_02250 PF06853 Protein of unknown function (DUF1249) N4267_02255 PF00149 Calcineurin-like phosphoesterase N4267_02260 PF05728 Uncharacterised protein family (UPF0227) N4267_02265 PF00204 DNA gyrase B N4267_02265 PF00986 DNA gyrase B subunit, carboxyl terminus N4267_02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_02265 PF01751 Toprim domain N4267_02270 PF03989 DNA gyrase C-terminal domain, beta-propeller N4267_02270 PF00521 DNA gyrase/topoisomerase IV, subunit A N4267_02275 PF03884 DNA gyrase inhibitor YacG N4267_02280 PF07072 Cell division protein N4267_02285 PF01121 Dephospho-CoA kinase N4267_02290 PF06750 Bacterial Peptidase A24 N-terminal domain N4267_02290 PF01478 Type IV leader peptidase family N4267_02295 PF00482 Type II secretion system (T2SS), protein F N4267_02300 PF00437 Type II/IV secretion system protein N4267_02300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N4267_02305 PF07963 Prokaryotic N-terminal methylation motif N4267_02305 PF00114 Pilin (bacterial filament) N4267_02310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N4267_02310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N4267_02315 PF01510 N-acetylmuramoyl-L-alanine amidase N4267_02320 PF01609 Transposase DDE domain N4267_02320 PF02281 Transposase Tn5 dimerisation domain N4267_02320 PF14706 Transposase DNA-binding N4267_02325 PF00258 Flavodoxin N4267_02330 PF02899 Phage integrase, N-terminal SAM-like domain N4267_02330 PF00589 Phage integrase family N4267_02335 PF10411 Disulfide bond isomerase protein N-terminus N4267_02335 PF13098 Thioredoxin-like domain N4267_02340 PF01368 DHH family N4267_02340 PF02272 DHHA1 domain N4267_02340 PF17768 RecJ OB domain N4267_02345 PF00392 Bacterial regulatory proteins, gntR family N4267_02345 PF07729 FCD domain N4267_02350 PF17831 Pyruvate dehydrogenase E1 component middle domain N4267_02350 PF00456 Transketolase, thiamine diphosphate binding domain N4267_02355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4267_02355 PF00364 Biotin-requiring enzyme N4267_02355 PF02817 e3 binding domain N4267_02360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4267_02360 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_02370 PF01795 MraW methylase family N4267_02375 PF04999 Cell division protein FtsL N4267_02380 PF03717 Penicillin-binding Protein dimerisation domain N4267_02380 PF00905 Penicillin binding protein transpeptidase domain N4267_02385 PF08245 Mur ligase middle domain N4267_02385 PF01225 Mur ligase family, catalytic domain N4267_02385 PF02875 Mur ligase family, glutamate ligase domain N4267_02390 PF08245 Mur ligase middle domain N4267_02390 PF02875 Mur ligase family, glutamate ligase domain N4267_02390 PF01225 Mur ligase family, catalytic domain N4267_02395 PF00953 Glycosyl transferase family 4 N4267_02395 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N4267_02400 PF02875 Mur ligase family, glutamate ligase domain N4267_02400 PF08245 Mur ligase middle domain N4267_02405 PF01098 Cell cycle protein N4267_02410 PF04101 Glycosyltransferase family 28 C-terminal domain N4267_02410 PF03033 Glycosyltransferase family 28 N-terminal domain N4267_02415 PF02875 Mur ligase family, glutamate ligase domain N4267_02415 PF01225 Mur ligase family, catalytic domain N4267_02415 PF08245 Mur ligase middle domain N4267_02420 PF08478 POTRA domain, FtsQ-type N4267_02420 PF03799 Cell division protein FtsQ N4267_02425 PF02491 SHS2 domain inserted in FTSA N4267_02430 PF00091 Tubulin/FtsZ family, GTPase domain N4267_02430 PF12327 FtsZ family, C-terminal domain N4267_02435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N4267_02445 PF02810 SEC-C motif N4267_02445 PF07517 SecA DEAD-like domain N4267_02445 PF01043 SecA preprotein cross-linking domain N4267_02445 PF07516 SecA Wing and Scaffold domain N4267_02450 PF00293 NUDIX domain N4267_02455 PF01113 Dihydrodipicolinate reductase, N-terminus N4267_02455 PF05173 Dihydrodipicolinate reductase, C-terminus N4267_02465 PF00117 Glutamine amidotransferase class-I N4267_02465 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N4267_02470 PF02142 MGS-like domain N4267_02470 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N4267_02470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4267_02490 PF01925 Sulfite exporter TauE/SafE N4267_02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_02495 PF03466 LysR substrate binding domain N4267_02500 PF03458 UPF0126 domain N4267_02505 PF01497 Periplasmic binding protein N4267_02515 PF01048 Phosphorylase superfamily N4267_02525 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_02525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N4267_02530 PF00310 Glutamine amidotransferases class-II N4267_02530 PF01645 Conserved region in glutamate synthase N4267_02530 PF04898 Glutamate synthase central domain N4267_02530 PF01493 GXGXG motif N4267_02535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N4267_02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_02540 PF00310 Glutamine amidotransferases class-II N4267_02540 PF04898 Glutamate synthase central domain N4267_02540 PF01645 Conserved region in glutamate synthase N4267_02540 PF01493 GXGXG motif N4267_02545 PF04055 Radical SAM superfamily N4267_02545 PF16199 Radical_SAM C-terminal domain N4267_02550 PF00360 Phytochrome region N4267_02550 PF01590 GAF domain N4267_02550 PF00990 Diguanylate cyclase, GGDEF domain N4267_02550 PF00563 EAL domain N4267_02555 PF00072 Response regulator receiver domain N4267_02555 PF01627 Hpt domain N4267_02555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_02555 PF00512 His Kinase A (phospho-acceptor) domain N4267_02555 PF18415 Histidine kinase receptor ArcB trans-membrane domain N4267_02555 PF00989 PAS fold N4267_02560 PF00486 Transcriptional regulatory protein, C terminal N4267_02560 PF00072 Response regulator receiver domain N4267_02570 PF03737 Aldolase/RraA N4267_02585 PF00742 Homoserine dehydrogenase N4267_02585 PF00696 Amino acid kinase family N4267_02585 PF01842 ACT domain N4267_02585 PF13840 ACT domain N4267_02585 PF03447 Homoserine dehydrogenase, NAD binding domain N4267_02590 PF08544 GHMP kinases C terminal N4267_02590 PF00288 GHMP kinases N terminal domain N4267_02595 PF00291 Pyridoxal-phosphate dependent enzyme N4267_02595 PF14821 Threonine synthase N terminus N4267_02600 PF01228 Glycine radical N4267_02605 PF01261 Xylose isomerase-like TIM barrel N4267_02615 PF03167 Uracil DNA glycosylase superfamily N4267_02630 PF01235 Sodium:alanine symporter family N4267_02635 PF03883 Peroxide stress protein YaaA N4267_02645 PF01026 TatD related DNase N4267_02650 PF07670 Nucleoside recognition N4267_02650 PF07662 Na+ dependent nucleoside transporter C-terminus N4267_02650 PF01773 Na+ dependent nucleoside transporter N-terminus N4267_02660 PF01791 DeoC/LacD family aldolase N4267_02665 PF02885 Glycosyl transferase family, helical bundle domain N4267_02665 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N4267_02665 PF00591 Glycosyl transferase family, a/b domain N4267_02670 PF01676 Metalloenzyme superfamily N4267_02685 PF18429 Domain of unknown function (DUF5609) N4267_02695 PF18073 Rubredoxin metal binding domain N4267_02700 PF03144 Elongation factor Tu domain 2 N4267_02700 PF03764 Elongation factor G, domain IV N4267_02700 PF14492 Elongation Factor G, domain II N4267_02700 PF00009 Elongation factor Tu GTP binding domain N4267_02700 PF00679 Elongation factor G C-terminus N4267_02705 PF00501 AMP-binding enzyme N4267_02710 PF00072 Response regulator receiver domain N4267_02720 PF16353 Domain of unknown function(DUF4981) N4267_02720 PF02836 Glycosyl hydrolases family 2, TIM barrel domain N4267_02720 PF02837 Glycosyl hydrolases family 2, sugar binding domain N4267_02720 PF02929 Beta galactosidase small chain N4267_02720 PF00703 Glycosyl hydrolases family 2 N4267_02725 PF00356 Bacterial regulatory proteins, lacI family N4267_02730 PF01588 Putative tRNA binding domain N4267_02740 PF01544 CorA-like Mg2+ transporter protein N4267_02745 PF02080 TrkA-C domain N4267_02745 PF18030 RimK PreATP-grasp domain N4267_02745 PF08443 RimK-like ATP-grasp domain N4267_02750 PF00583 Acetyltransferase (GNAT) family N4267_02760 PF14602 Hexapeptide repeat of succinyl-transferase N4267_02760 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle N4267_02765 PF07130 YebG protein N4267_02770 PF03466 LysR substrate binding domain N4267_02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_02780 PF17946 RecC C-terminal domain N4267_02785 PF13361 UvrD-like helicase C-terminal domain N4267_02785 PF12705 PD-(D/E)XK nuclease superfamily N4267_02785 PF00580 UvrD/REP helicase N-terminal domain N4267_02790 PF13538 UvrD-like helicase C-terminal domain N4267_02800 PF00696 Amino acid kinase family N4267_02800 PF00583 Acetyltransferase (GNAT) family N4267_02810 PF03562 MltA specific insert domain N4267_02810 PF06725 3D domain N4267_02815 PF00899 ThiF family N4267_02820 PF02657 Fe-S metabolism associated domain N4267_02825 PF00266 Aminotransferase class-V N4267_02830 PF01965 DJ-1/PfpI family N4267_02835 PF02558 Ketopantoate reductase PanE/ApbA N4267_02835 PF08546 Ketopantoate reductase PanE/ApbA C terminal N4267_02840 PF03502 Nucleoside-specific channel-forming protein, Tsx N4267_02850 PF04542 Sigma-70 region 2 N4267_02850 PF04545 Sigma-70, region 4 N4267_02860 PF07690 Major Facilitator Superfamily N4267_02865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N4267_02875 PF05175 Methyltransferase small domain N4267_02880 PF01722 BolA-like protein N4267_02885 PF11973 NQRA C-terminal domain N4267_02885 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) N4267_02890 PF03116 NQR2, RnfD, RnfE family N4267_02895 PF04205 FMN-binding domain N4267_02900 PF02508 Rnf-Nqr subunit, membrane protein N4267_02905 PF02508 Rnf-Nqr subunit, membrane protein N4267_02910 PF00970 Oxidoreductase FAD-binding domain N4267_02910 PF00175 Oxidoreductase NAD-binding domain N4267_02910 PF00111 2Fe-2S iron-sulfur cluster binding domain N4267_02915 PF02424 ApbE family N4267_02925 PF00817 impB/mucB/samB family N4267_02925 PF11798 IMS family HHH motif N4267_02935 PF00990 Diguanylate cyclase, GGDEF domain N4267_02935 PF17158 Membrane-associated sensor, integral membrane domain N4267_02940 PF00209 Sodium:neurotransmitter symporter family N4267_02950 PF08443 RimK-like ATP-grasp domain N4267_02950 PF18030 RimK PreATP-grasp domain N4267_02955 PF08443 RimK-like ATP-grasp domain N4267_02955 PF18030 RimK PreATP-grasp domain N4267_02960 PF07687 Peptidase dimerisation domain N4267_02960 PF01546 Peptidase family M20/M25/M40 N4267_02965 PF00860 Permease family N4267_02970 PF00156 Phosphoribosyl transferase domain N4267_02975 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) N4267_02980 PF07417 Sigma factor-binding transcriptional regulator Crl N4267_02985 PF00696 Amino acid kinase family N4267_02985 PF01472 PUA domain N4267_02990 PF00171 Aldehyde dehydrogenase family N4267_02995 PF03477 ATP cone domain N4267_03000 PF01872 RibD C-terminal domain N4267_03000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4267_03005 PF00677 Lumazine binding domain N4267_03010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N4267_03010 PF00925 GTP cyclohydrolase II N4267_03015 PF00885 6,7-dimethyl-8-ribityllumazine synthase N4267_03020 PF01029 NusB family N4267_03025 PF02769 AIR synthase related protein, C-terminal domain N4267_03025 PF00586 AIR synthase related protein, N-terminal domain N4267_03030 PF04608 Phosphatidylglycerophosphatase A N4267_03035 PF11944 Protein of unknown function (DUF3461) N4267_03040 PF08335 GlnD PII-uridylyltransferase N4267_03040 PF01909 Nucleotidyltransferase domain N4267_03040 PF01966 HD domain N4267_03045 PF00557 Metallopeptidase family M24 N4267_03050 PF00318 Ribosomal protein S2 N4267_03055 PF00889 Elongation factor TS N4267_03060 PF00696 Amino acid kinase family N4267_03065 PF01765 Ribosome recycling factor N4267_03070 PF01255 Putative undecaprenyl diphosphate synthase N4267_03080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N4267_03080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N4267_03080 PF13288 DXP reductoisomerase C-terminal domain N4267_03085 PF02163 Peptidase family M50 N4267_03085 PF17820 PDZ domain N4267_03090 PF07244 Surface antigen variable number repeat N4267_03090 PF01103 Surface antigen N4267_03095 PF03938 Outer membrane protein (OmpH-like) N4267_03100 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_03100 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N4267_03105 PF07977 FabA-like domain N4267_03110 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N4267_03110 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_03115 PF02684 Lipid-A-disaccharide synthetase N4267_03120 PF01351 Ribonuclease HII N4267_03125 PF07733 Bacterial DNA polymerase III alpha NTPase domain N4267_03125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N4267_03125 PF14579 Helix-hairpin-helix motif N4267_03125 PF02811 PHP domain N4267_03125 PF01336 OB-fold nucleic acid binding domain N4267_03130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N4267_03135 PF14706 Transposase DNA-binding N4267_03135 PF02281 Transposase Tn5 dimerisation domain N4267_03135 PF01609 Transposase DDE domain N4267_03140 PF09179 TilS substrate binding domain N4267_03140 PF11734 TilS substrate C-terminal domain N4267_03140 PF01171 PP-loop family N4267_03145 PF00034 Cytochrome c N4267_03150 PF05870 Phenolic acid decarboxylase (PAD) N4267_03155 PF00543 Nitrogen regulatory protein P-II N4267_03160 PF03372 Endonuclease/Exonuclease/phosphatase family N4267_03165 PF01476 LysM domain N4267_03165 PF01464 Transglycosylase SLT domain N4267_03170 PF16123 Hydroxyacylglutathione hydrolase C-terminus N4267_03170 PF00753 Metallo-beta-lactamase superfamily N4267_03175 PF08241 Methyltransferase domain N4267_03180 PF00075 RNase H N4267_03185 PF00929 Exonuclease N4267_03195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4267_03195 PF02770 Acyl-CoA dehydrogenase, middle domain N4267_03195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4267_03195 PF09317 Domain of unknown function (DUF1974) N4267_03200 PF13580 SIS domain N4267_03205 PF13230 Glutamine amidotransferases class-II N4267_03210 PF00551 Formyl transferase N4267_03215 PF00586 AIR synthase related protein, N-terminal domain N4267_03215 PF02769 AIR synthase related protein, C-terminal domain N4267_03225 PF00990 Diguanylate cyclase, GGDEF domain N4267_03230 PF00849 RNA pseudouridylate synthase N4267_03230 PF01479 S4 domain N4267_03235 PF01713 Smr domain N4267_03250 PF01963 TraB family N4267_03255 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain N4267_03255 PF03173 Putative carbohydrate binding domain N4267_03255 PF02838 Glycosyl hydrolase family 20, domain 2 N4267_03255 PF00728 Glycosyl hydrolase family 20, catalytic domain N4267_03265 PF00403 Heavy-metal-associated domain N4267_03270 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4267_03275 PF00691 OmpA family N4267_03275 PF01389 OmpA-like transmembrane domain N4267_03285 PF07715 TonB-dependent Receptor Plug Domain N4267_03290 PF08021 Siderophore-interacting FAD-binding domain N4267_03290 PF04954 Siderophore-interacting protein N4267_03295 PF00501 AMP-binding enzyme N4267_03295 PF00668 Condensation domain N4267_03295 PF08242 Methyltransferase domain N4267_03295 PF00550 Phosphopantetheine attachment site N4267_03330 PF01584 CheW-like domain N4267_03330 PF00072 Response regulator receiver domain N4267_03335 PF01739 CheR methyltransferase, SAM binding domain N4267_03335 PF03705 CheR methyltransferase, all-alpha domain N4267_03340 PF00460 Flagella basal body rod protein N4267_03345 PF00460 Flagella basal body rod protein N4267_03345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N4267_03350 PF03963 Flagellar hook capping protein - N-terminal region N4267_03350 PF13860 FlgD Ig-like domain N4267_03350 PF13861 FlgD Tudor-like domain N4267_03355 PF07559 Flagellar basal body protein FlaE N4267_03355 PF00460 Flagella basal body rod protein N4267_03355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N4267_03360 PF00460 Flagella basal body rod protein N4267_03360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N4267_03365 PF00460 Flagella basal body rod protein N4267_03365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N4267_03370 PF02107 Flagellar L-ring protein N4267_03375 PF02119 Flagellar P-ring protein N4267_03380 PF10135 Rod binding protein N4267_03380 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase N4267_03385 PF07196 Flagellin hook IN motif N4267_03385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N4267_03395 PF00700 Bacterial flagellin C-terminal helical region N4267_03395 PF07196 Flagellin hook IN motif N4267_03395 PF00669 Bacterial flagellin N-terminal helical region N4267_03400 PF00700 Bacterial flagellin C-terminal helical region N4267_03400 PF07196 Flagellin hook IN motif N4267_03400 PF00669 Bacterial flagellin N-terminal helical region N4267_03485 PF01926 50S ribosome-binding GTPase N4267_03485 PF06071 Protein of unknown function (DUF933) N4267_03490 PF01195 Peptidyl-tRNA hydrolase N4267_03495 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N4267_03495 PF14572 Phosphoribosyl synthetase-associated domain N4267_03500 PF00288 GHMP kinases N terminal domain N4267_03500 PF08544 GHMP kinases C terminal N4267_03505 PF03550 Outer membrane lipoprotein LolB N4267_03510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N4267_03510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N4267_03510 PF01488 Shikimate / quinate 5-dehydrogenase N4267_03515 PF03462 PCRF domain N4267_03515 PF00472 RF-1 domain N4267_03520 PF13847 Methyltransferase domain N4267_03520 PF17827 PrmC N-terminal domain N4267_03525 PF04247 Invasion gene expression up-regulator, SirB N4267_03530 PF13369 Transglutaminase-like superfamily N4267_03535 PF00793 DAHP synthetase I family N4267_03540 PF00149 Calcineurin-like phosphoesterase N4267_03540 PF02872 5'-nucleotidase, C-terminal domain N4267_03545 PF04073 Aminoacyl-tRNA editing domain N4267_03550 PF00860 Permease family N4267_03565 PF03358 NADPH-dependent FMN reductase N4267_03570 PF03960 ArsC family N4267_03575 PF01435 Peptidase family M48 N4267_03575 PF13181 Tetratricopeptide repeat N4267_03585 PF01594 AI-2E family transporter N4267_03590 PF02743 Cache domain N4267_03590 PF00672 HAMP domain N4267_03590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_03595 PF00578 AhpC/TSA family N4267_03605 PF00701 Dihydrodipicolinate synthetase family N4267_03610 PF06804 NlpB/DapX lipoprotein N4267_03615 PF01797 Transposase IS200 like N4267_03625 PF02557 D-alanyl-D-alanine carboxypeptidase N4267_03630 PF07687 Peptidase dimerisation domain N4267_03630 PF01546 Peptidase family M20/M25/M40 N4267_03635 PF03960 ArsC family N4267_03650 PF11143 Protein of unknown function (DUF2919) N4267_03655 PF04261 Dyp-type peroxidase family N4267_03660 PF10282 Lactonase, 7-bladed beta-propeller N4267_03665 PF02838 Glycosyl hydrolase family 20, domain 2 N4267_03665 PF00728 Glycosyl hydrolase family 20, catalytic domain N4267_03670 PF01081 KDPG and KHG aldolase N4267_03675 PF00294 pfkB family carbohydrate kinase N4267_03680 PF00474 Sodium:solute symporter family N4267_03690 PF07969 Amidohydrolase family N4267_03700 PF02685 Glucokinase N4267_03700 PF01418 Helix-turn-helix domain, rpiR family N4267_03700 PF01380 SIS domain N4267_03705 PF07196 Flagellin hook IN motif N4267_03705 PF00700 Bacterial flagellin C-terminal helical region N4267_03705 PF00669 Bacterial flagellin N-terminal helical region N4267_03710 PF00669 Bacterial flagellin N-terminal helical region N4267_03710 PF07196 Flagellin hook IN motif N4267_03710 PF00700 Bacterial flagellin C-terminal helical region N4267_03715 PF07196 Flagellin hook IN motif N4267_03715 PF00669 Bacterial flagellin N-terminal helical region N4267_03715 PF00700 Bacterial flagellin C-terminal helical region N4267_03720 PF03646 FlaG protein N4267_03725 PF07195 Flagellar hook-associated protein 2 C-terminus N4267_03725 PF02465 Flagellar hook-associated protein 2 N-terminus N4267_03725 PF07196 Flagellin hook IN motif N4267_03735 PF02561 Flagellar protein FliS N4267_03740 PF00158 Sigma-54 interaction domain N4267_03740 PF02954 Bacterial regulatory protein, Fis family N4267_03740 PF06490 Flagellar regulatory protein FleQ N4267_03745 PF13188 PAS domain N4267_03745 PF00512 His Kinase A (phospho-acceptor) domain N4267_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_03750 PF00158 Sigma-54 interaction domain N4267_03750 PF00072 Response regulator receiver domain N4267_03750 PF02954 Bacterial regulatory protein, Fis family N4267_03755 PF02049 Flagellar hook-basal body complex protein FliE N4267_03760 PF01514 Secretory protein of YscJ/FliF family N4267_03760 PF08345 Flagellar M-ring protein C-terminal N4267_03765 PF01706 FliG C-terminal domain N4267_03765 PF14841 FliG middle domain N4267_03765 PF14842 FliG N-terminal domain N4267_03770 PF02108 Flagellar assembly protein FliH N4267_03775 PF18269 T3SS EscN ATPase C-terminal domain N4267_03775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4267_03795 PF03748 Flagellar basal body-associated protein FliL N4267_03800 PF02154 Flagellar motor switch protein FliM N4267_03800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N4267_03805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N4267_03810 PF04347 Flagellar biosynthesis protein, FliO N4267_03815 PF00813 FliP family N4267_03820 PF01313 Bacterial export proteins, family 3 N4267_03825 PF01311 Bacterial export proteins, family 1 N4267_03830 PF01312 FlhB HrpN YscU SpaS Family N4267_03835 PF01713 Smr domain N4267_03840 PF05175 Methyltransferase small domain N4267_03845 PF01264 Chorismate synthase N4267_03850 PF03458 UPF0126 domain N4267_03855 PF04315 Elongation factor P hydroxylase N4267_03860 PF08891 YfcL protein N4267_03865 PF03358 NADPH-dependent FMN reductase N4267_03870 PF01266 FAD dependent oxidoreductase N4267_03870 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N4267_03875 PF00109 Beta-ketoacyl synthase, N-terminal domain N4267_03875 PF02801 Beta-ketoacyl synthase, C-terminal domain N4267_03880 PF11890 Domain of unknown function (DUF3410) N4267_03880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4267_03880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4267_03885 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4267_03885 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4267_03890 PF01475 Ferric uptake regulator family N4267_03900 PF03466 LysR substrate binding domain N4267_03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_03905 PF03788 LrgA family N4267_03910 PF04172 LrgB-like family N4267_03915 PF00258 Flavodoxin N4267_03925 PF12697 Alpha/beta hydrolase family N4267_03930 PF03925 SeqA protein C-terminal domain N4267_03930 PF17206 SeqA protein N-terminal domain N4267_03935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4267_03935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4267_03935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4267_03935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4267_03945 PF01784 NIF3 (NGG1p interacting factor 3) N4267_03950 PF00285 Citrate synthase, C-terminal domain N4267_03955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N4267_03960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N4267_03965 PF00890 FAD binding domain N4267_03965 PF02910 Fumarate reductase flavoprotein C-term N4267_03970 PF13085 2Fe-2S iron-sulfur cluster binding domain N4267_03975 PF00676 Dehydrogenase E1 component N4267_03975 PF16078 2-oxoglutarate dehydrogenase N-terminus N4267_03975 PF02779 Transketolase, pyrimidine binding domain N4267_03975 PF16870 2-oxoglutarate dehydrogenase C-terminal N4267_03980 PF02817 e3 binding domain N4267_03980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N4267_03980 PF00364 Biotin-requiring enzyme N4267_03985 PF00549 CoA-ligase N4267_03985 PF08442 ATP-grasp domain N4267_03990 PF02629 CoA binding domain N4267_03990 PF00549 CoA-ligase N4267_03995 PF00950 ABC 3 transport family N4267_04000 PF00005 ABC transporter N4267_04005 PF01297 Zinc-uptake complex component A periplasmic N4267_04010 PF02311 AraC-like ligand binding domain N4267_04010 PF12833 Helix-turn-helix domain N4267_04015 PF04023 FeoA domain N4267_04020 PF07664 Ferrous iron transport protein B C terminus N4267_04020 PF02421 Ferrous iron transport protein B N4267_04020 PF07670 Nucleoside recognition N4267_04035 PF00750 tRNA synthetases class I (R) N4267_04035 PF05746 DALR anticodon binding domain N4267_04035 PF03485 Arginyl tRNA synthetase N terminal domain N4267_04045 PF00675 Insulinase (Peptidase family M16) N4267_04045 PF05193 Peptidase M16 inactive domain N4267_04050 PF00300 Histidine phosphatase superfamily (branch 1) N4267_04055 PF00771 FHIPEP family N4267_04060 PF00448 SRP54-type protein, GTPase domain N4267_04065 PF10609 NUBPL iron-transfer P-loop NTPase N4267_04070 PF04542 Sigma-70 region 2 N4267_04070 PF04539 Sigma-70 region 3 N4267_04070 PF04545 Sigma-70, region 4 N4267_04075 PF00072 Response regulator receiver domain N4267_04080 PF04344 Chemotaxis phosphatase, CheZ N4267_04085 PF00072 Response regulator receiver domain N4267_04085 PF01627 Hpt domain N4267_04085 PF02895 Signal transducing histidine kinase, homodimeric domain N4267_04085 PF01584 CheW-like domain N4267_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_04090 PF00072 Response regulator receiver domain N4267_04090 PF01339 CheB methylesterase N4267_04095 PF13614 AAA domain N4267_04105 PF01584 CheW-like domain N4267_04115 PF00005 ABC transporter N4267_04120 PF03379 CcmB protein N4267_04125 PF01578 Cytochrome C assembly protein N4267_04130 PF04995 Heme exporter protein D (CcmD) N4267_04135 PF03100 CcmE N4267_04140 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N4267_04140 PF01578 Cytochrome C assembly protein N4267_04145 PF08534 Redoxin N4267_04150 PF03918 Cytochrome C biogenesis protein N4267_04160 PF04333 MlaA lipoprotein N4267_04175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N4267_04175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N4267_04180 PF00462 Glutaredoxin N4267_04185 PF01131 DNA topoisomerase N4267_04185 PF01751 Toprim domain N4267_04190 PF00850 Histone deacetylase domain N4267_04205 PF00884 Sulfatase N4267_04205 PF11893 Domain of unknown function (DUF3413) N4267_04210 PF07208 Protein of unknown function (DUF1414) N4267_04215 PF04245 37-kD nucleoid-associated bacterial protein N4267_04225 PF03553 Na+/H+ antiporter family N4267_04230 PF01118 Semialdehyde dehydrogenase, NAD binding domain N4267_04230 PF02774 Semialdehyde dehydrogenase, dimerisation domain N4267_04235 PF01914 MarC family integral membrane protein N4267_04240 PF00171 Aldehyde dehydrogenase family N4267_04240 PF00465 Iron-containing alcohol dehydrogenase N4267_04250 PF01740 STAS domain N4267_04250 PF00916 Sulfate permease family N4267_04255 PF12111 Polyribonucleotide phosphorylase C terminal N4267_04255 PF10150 Ribonuclease E/G family N4267_04255 PF00575 S1 RNA binding domain N4267_04260 PF01479 S4 domain N4267_04260 PF00849 RNA pseudouridylate synthase N4267_04265 PF02545 Maf-like protein N4267_04270 PF02620 Large ribosomal RNA subunit accumulation protein YceD N4267_04275 PF01783 Ribosomal L32p protein family N4267_04280 PF02504 Fatty acid synthesis protein N4267_04285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N4267_04285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N4267_04290 PF00698 Acyl transferase domain N4267_04300 PF00550 Phosphopantetheine attachment site N4267_04305 PF00109 Beta-ketoacyl synthase, N-terminal domain N4267_04305 PF02801 Beta-ketoacyl synthase, C-terminal domain N4267_04310 PF01063 Amino-transferase class IV N4267_04315 PF02618 YceG-like family N4267_04320 PF02223 Thymidylate kinase N4267_04325 PF09115 DNA polymerase III, delta subunit, C terminal N4267_04330 PF01026 TatD related DNase N4267_04335 PF00367 phosphotransferase system, EIIB N4267_04335 PF02378 Phosphotransferase system, EIIC N4267_04345 PF00209 Sodium:neurotransmitter symporter family N4267_04360 PF01734 Patatin-like phospholipase N4267_04365 PF02887 Pyruvate kinase, alpha/beta domain N4267_04365 PF00224 Pyruvate kinase, barrel domain N4267_04370 PF00480 ROK family N4267_04375 PF01584 CheW-like domain N4267_04375 PF00072 Response regulator receiver domain N4267_04390 PF13847 Methyltransferase domain N4267_04400 PF01263 Aldose 1-epimerase N4267_04405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4267_04405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4267_04410 PF01641 SelR domain N4267_04420 PF07023 Protein of unknown function (DUF1315) N4267_04425 PF17763 Glutaminase/Asparaginase C-terminal domain N4267_04425 PF00710 Asparaginase, N-terminal N4267_04430 PF01343 Peptidase family S49 N4267_04435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4267_04435 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_04440 PF01842 ACT domain N4267_04440 PF00551 Formyl transferase N4267_04450 PF13307 Helicase C-terminal domain N4267_04450 PF04851 Type III restriction enzyme, res subunit N4267_04455 PF00814 Glycoprotease family N4267_04470 PF00561 alpha/beta hydrolase fold N4267_04475 PF00501 AMP-binding enzyme N4267_04475 PF13193 AMP-binding enzyme C-terminal domain N4267_04480 PF01612 3'-5' exonuclease N4267_04480 PF00570 HRDC domain N4267_04495 PF01966 HD domain N4267_04495 PF13286 Phosphohydrolase-associated domain N4267_04505 PF00155 Aminotransferase class I and II N4267_04510 PF00425 chorismate binding enzyme N4267_04515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4267_04515 PF16582 Middle domain of thiamine pyrophosphate N4267_04515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4267_04520 PF12697 Alpha/beta hydrolase family N4267_04525 PF00378 Enoyl-CoA hydratase/isomerase N4267_04530 PF13378 Enolase C-terminal domain-like N4267_04535 PF00501 AMP-binding enzyme N4267_04535 PF13193 AMP-binding enzyme C-terminal domain N4267_04540 PF03594 Benzoate membrane transport protein N4267_04545 PF07690 Major Facilitator Superfamily N4267_04565 PF04170 NlpE N-terminal domain N4267_04570 PF03776 Septum formation topological specificity factor MinE N4267_04575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N4267_04580 PF03775 Septum formation inhibitor MinC, C-terminal domain N4267_04580 PF05209 Septum formation inhibitor MinC, N-terminal domain N4267_04585 PF05166 YcgL domain N4267_04590 PF13406 Transglycosylase SLT domain N4267_04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_04595 PF03466 LysR substrate binding domain N4267_04600 PF01773 Na+ dependent nucleoside transporter N-terminus N4267_04600 PF07670 Nucleoside recognition N4267_04600 PF07662 Na+ dependent nucleoside transporter C-terminus N4267_04605 PF03264 NapC/NirT cytochrome c family, N-terminal region N4267_04610 PF00384 Molybdopterin oxidoreductase N4267_04610 PF18364 Molybdopterin oxidoreductase N-terminal domain N4267_04610 PF01568 Molydopterin dinucleotide binding domain N4267_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_04620 PF03466 LysR substrate binding domain N4267_04625 PF01494 FAD binding domain N4267_04630 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N4267_04640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N4267_04640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N4267_04680 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N4267_04685 PF03480 Bacterial extracellular solute-binding protein, family 7 N4267_04690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N4267_04695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N4267_04700 PF02954 Bacterial regulatory protein, Fis family N4267_04700 PF00072 Response regulator receiver domain N4267_04700 PF00158 Sigma-54 interaction domain N4267_04705 PF00512 His Kinase A (phospho-acceptor) domain N4267_04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_04715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4267_04715 PF05698 Bacterial trigger factor protein (TF) C-terminus N4267_04715 PF05697 Bacterial trigger factor protein (TF) N4267_04720 PF00574 Clp protease N4267_04725 PF06689 ClpX C4-type zinc finger N4267_04725 PF07724 AAA domain (Cdc48 subfamily) N4267_04725 PF10431 C-terminal, D2-small domain, of ClpB protein N4267_04730 PF00004 ATPase family associated with various cellular activities (AAA) N4267_04730 PF05362 Lon protease (S16) C-terminal proteolytic domain N4267_04730 PF02190 ATP-dependent protease La (LON) substrate-binding domain N4267_04735 PF00216 Bacterial DNA-binding protein N4267_04740 PF13145 PPIC-type PPIASE domain N4267_04750 PF02224 Cytidylate kinase N4267_04755 PF00575 S1 RNA binding domain N4267_04760 PF00216 Bacterial DNA-binding protein N4267_04765 PF06305 Lipopolysaccharide assembly protein A domain N4267_04770 PF18073 Rubredoxin metal binding domain N4267_04775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N4267_04780 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) N4267_04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_04790 PF03466 LysR substrate binding domain N4267_04800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N4267_04800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N4267_04805 PF01037 Lrp/AsnC ligand binding domain N4267_04810 PF01580 FtsK/SpoIIIE family N4267_04810 PF09397 Ftsk gamma domain N4267_04810 PF17854 FtsK alpha domain N4267_04810 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N4267_04815 PF02600 Disulfide bond formation protein DsbB N4267_04820 PF06450 Bacterial Na+/H+ antiporter B (NhaB) N4267_04825 PF07840 FadR C-terminal domain N4267_04825 PF00392 Bacterial regulatory proteins, gntR family N4267_04835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_04835 PF00672 HAMP domain N4267_04840 PF01230 HIT domain N4267_04855 PF08139 Prokaryotic membrane lipoprotein lipid attachment site N4267_04855 PF13036 Peptidoglycan-synthase activator LpoB N4267_04865 PF05728 Uncharacterised protein family (UPF0227) N4267_04870 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_04880 PF12563 Hemolytic toxin N terminal N4267_04880 PF07968 Leukocidin/Hemolysin toxin family N4267_04880 PF16458 Beta-prism lectin N4267_04885 PF07968 Leukocidin/Hemolysin toxin family N4267_04885 PF12563 Hemolytic toxin N terminal N4267_04885 PF16458 Beta-prism lectin N4267_04895 PF17757 UvrB interaction domain N4267_04895 PF02559 CarD-like/TRCF domain N4267_04895 PF00270 DEAD/DEAH box helicase N4267_04895 PF00271 Helicase conserved C-terminal domain N4267_04895 PF03461 TRCF domain N4267_04905 PF12704 MacB-like periplasmic core domain N4267_04905 PF02687 FtsX-like permease family N4267_04910 PF00005 ABC transporter N4267_04915 PF02687 FtsX-like permease family N4267_04915 PF12704 MacB-like periplasmic core domain N4267_04925 PF13567 Domain of unknown function (DUF4131) N4267_04925 PF00753 Metallo-beta-lactamase superfamily N4267_04925 PF03772 Competence protein N4267_04930 PF00664 ABC transporter transmembrane region N4267_04930 PF00005 ABC transporter N4267_04935 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N4267_04940 PF03966 Trm112p-like protein N4267_04945 PF02348 Cytidylyltransferase N4267_04950 PF04293 SpoVR like protein N4267_04955 PF04285 Protein of unknown function (DUF444) N4267_04960 PF06798 PrkA serine protein kinase C-terminal domain N4267_04960 PF08298 PrkA AAA domain N4267_04965 PF03887 YfbU domain N4267_04975 PF04055 Radical SAM superfamily N4267_04980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_04980 PF00672 HAMP domain N4267_04980 PF12729 Four helix bundle sensory module for signal transduction N4267_04990 PF01228 Glycine radical N4267_04990 PF02901 Pyruvate formate lyase-like N4267_05000 PF00005 ABC transporter N4267_05005 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_05010 PF00528 Binding-protein-dependent transport system inner membrane component N4267_05015 PF00528 Binding-protein-dependent transport system inner membrane component N4267_05020 PF03372 Endonuclease/Exonuclease/phosphatase family N4267_05025 PF10689 Protein of unknown function (DUF2496) N4267_05030 PF07445 Primosomal replication protein priC N4267_05035 PF01925 Sulfite exporter TauE/SafE N4267_05040 PF06733 DEAD_2 N4267_05040 PF13307 Helicase C-terminal domain N4267_05050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N4267_05055 PF02810 SEC-C motif N4267_05060 PF08668 HDOD domain N4267_05060 PF00563 EAL domain N4267_05065 PF00149 Calcineurin-like phosphoesterase N4267_05070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N4267_05075 PF09190 DALR domain N4267_05075 PF01406 tRNA synthetases class I (C) catalytic domain N4267_05080 PF02075 Crossover junction endodeoxyribonuclease RuvC N4267_05085 PF07499 RuvA, C-terminal domain N4267_05085 PF01330 RuvA N terminal domain N4267_05090 PF17864 RuvB AAA lid domain N4267_05090 PF05491 RuvB C-terminal winged helix domain N4267_05090 PF05496 Holliday junction DNA helicase RuvB P-loop domain N4267_05095 PF01654 Cytochrome bd terminal oxidase subunit I N4267_05100 PF02322 Cytochrome bd terminal oxidase subunit II N4267_05105 PF08173 Membrane bound YbgT-like protein N4267_05115 PF03061 Thioesterase superfamily N4267_05120 PF01618 MotA/TolQ/ExbB proton channel family N4267_05125 PF02472 Biopolymer transport protein ExbD/TolR N4267_05135 PF04052 TolB amino-terminal domain N4267_05135 PF07676 WD40-like Beta Propeller Repeat N4267_05140 PF00691 OmpA family N4267_05150 PF02445 Quinolinate synthetase A protein N4267_05160 PF09308 LuxQ, periplasmic N4267_05160 PF00072 Response regulator receiver domain N4267_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_05160 PF00512 His Kinase A (phospho-acceptor) domain N4267_05165 PF06610 L-alanine exporter N4267_05170 PF01238 Phosphomannose isomerase type I N4267_05175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N4267_05175 PF02378 Phosphotransferase system, EIIC N4267_05175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N4267_05180 PF12833 Helix-turn-helix domain N4267_05190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N4267_05215 PF09905 DNA-binding protein VF530 N4267_05225 PF00875 DNA photolyase N4267_05225 PF03441 FAD binding domain of DNA photolyase N4267_05250 PF01381 Helix-turn-helix N4267_05250 PF00717 Peptidase S24-like N4267_05310 PF00717 Peptidase S24-like N4267_05350 PF05973 Phage derived protein Gp49-like (DUF891) N4267_05405 PF10411 Disulfide bond isomerase protein N-terminus N4267_05405 PF13098 Thioredoxin-like domain N4267_05430 PF06834 TraU protein N4267_05435 PF06986 Type-1V conjugative transfer system mating pair stabilisation N4267_05480 PF17291 N-terminal domain of M60-like peptidases N4267_05480 PF13402 Peptidase M60, enhancin and enhancin-like N4267_05480 PF13322 Domain of unknown function (DUF4092) N4267_05515 PF00576 HIUase/Transthyretin family N4267_05520 PF03928 Haem-degrading N4267_05525 PF02368 Bacterial Ig-like domain (group 2) N4267_05525 PF11999 Protein of unknown function (DUF3494) N4267_05530 PF12697 Alpha/beta hydrolase family N4267_05535 PF05946 Toxin-coregulated pilus subunit TcpA N4267_05535 PF07963 Prokaryotic N-terminal methylation motif N4267_05570 PF00437 Type II/IV secretion system protein N4267_05575 PF00482 Type II secretion system (T2SS), protein F N4267_05580 PF06750 Bacterial Peptidase A24 N-terminal domain N4267_05580 PF01478 Type IV leader peptidase family N4267_05595 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family N4267_05615 PF17945 Beta/Gamma crystallin N4267_05615 PF12561 ToxR activated gene A lipoprotein domain N4267_05630 PF12833 Helix-turn-helix domain N4267_05640 PF18500 CadC C-terminal domain 1 N4267_05640 PF00486 Transcriptional regulatory protein, C terminal N4267_05645 PF00873 AcrB/AcrD/AcrF family N4267_05660 PF01375 Heat-labile enterotoxin alpha chain N4267_05690 PF00436 Single-strand binding protein family N4267_05710 PF07728 AAA domain (dynein-related subfamily) N4267_05710 PF08406 CbbQ/NirQ/NorQ C-terminal N4267_05730 PF00092 von Willebrand factor type A domain N4267_05735 PF04002 RadC-like JAB domain N4267_05760 PF06122 Conjugative relaxosome accessory transposon protein N4267_05775 PF05930 Prophage CP4-57 regulatory protein (AlpA) N4267_05780 PF13356 Arm DNA-binding domain N4267_05780 PF00589 Phage integrase family N4267_05790 PF00873 AcrB/AcrD/AcrF family N4267_05795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4267_05805 PF02470 MlaD protein N4267_05810 PF04403 Paraquat-inducible protein A N4267_05815 PF08362 YcdC-like protein, C-terminal region N4267_05815 PF00440 Bacterial regulatory proteins, tetR family N4267_05820 PF00171 Aldehyde dehydrogenase family N4267_05825 PF07383 Protein of unknown function (DUF1496) N4267_05835 PF00440 Bacterial regulatory proteins, tetR family N4267_05835 PF16295 Tetracyclin repressor-like, C-terminal domain N4267_05840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N4267_05840 PF02770 Acyl-CoA dehydrogenase, middle domain N4267_05840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N4267_05840 PF09317 Domain of unknown function (DUF1974) N4267_05845 PF12241 Trans-2-enoyl-CoA reductase catalytic region N4267_05845 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N4267_05845 PF07055 Enoyl reductase FAD binding domain N4267_05850 PF01176 Translation initiation factor 1A / IF-1 N4267_05855 PF04377 Arginine-tRNA-protein transferase, C terminus N4267_05855 PF04376 Arginine-tRNA-protein transferase, N terminus N4267_05860 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N4267_05865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N4267_05870 PF10692 Protein of unknown function (DUF2498) N4267_05875 PF01396 Topoisomerase DNA binding C4 zinc finger N4267_05875 PF08272 Topoisomerase I zinc-ribbon-like N4267_05875 PF01131 DNA topoisomerase N4267_05875 PF01751 Toprim domain N4267_05880 PF00483 Nucleotidyl transferase N4267_05885 PF08323 Starch synthase catalytic domain N4267_05885 PF00534 Glycosyl transferases group 1 N4267_05905 PF04994 TfoX C-terminal domain N4267_05905 PF04993 TfoX N-terminal domain N4267_05910 PF00356 Bacterial regulatory proteins, lacI family N4267_05915 PF02613 Nitrate reductase delta subunit N4267_05920 PF00072 Response regulator receiver domain N4267_05920 PF00486 Transcriptional regulatory protein, C terminal N4267_05925 PF02698 DUF218 domain N4267_05930 PF13847 Methyltransferase domain N4267_05935 PF17193 MukF C-terminal domain N4267_05935 PF17192 MukF middle domain N4267_05935 PF03882 MukF winged-helix domain N4267_05940 PF04288 MukE-like family N4267_05945 PF04310 MukB N-terminal N4267_05945 PF16330 MukB hinge domain N4267_05950 PF01037 Lrp/AsnC ligand binding domain N4267_05955 PF01810 LysE type translocator N4267_05960 PF02281 Transposase Tn5 dimerisation domain N4267_05960 PF01609 Transposase DDE domain N4267_05960 PF14706 Transposase DNA-binding N4267_05965 PF08497 Radical SAM N-terminal N4267_05965 PF11842 Domain of unknown function (DUF3362) N4267_05965 PF04055 Radical SAM superfamily N4267_05970 PF00563 EAL domain N4267_05970 PF00990 Diguanylate cyclase, GGDEF domain N4267_05970 PF08447 PAS fold N4267_05970 PF08448 PAS fold N4267_05975 PF05193 Peptidase M16 inactive domain N4267_05975 PF00675 Insulinase (Peptidase family M16) N4267_05990 PF03466 LysR substrate binding domain N4267_05990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_05995 PF08267 Cobalamin-independent synthase, N-terminal domain N4267_05995 PF01717 Cobalamin-independent synthase, Catalytic domain N4267_06005 PF03795 YCII-related domain N4267_06010 PF03061 Thioesterase superfamily N4267_06015 PF04279 Intracellular septation protein A N4267_06025 PF02698 DUF218 domain N4267_06030 PF01370 NAD dependent epimerase/dehydratase family N4267_06040 PF01226 Formate/nitrite transporter N4267_06045 PF06796 Periplasmic nitrate reductase protein NapE N4267_06050 PF03264 NapC/NirT cytochrome c family, N-terminal region N4267_06055 PF18364 Molybdopterin oxidoreductase N-terminal domain N4267_06055 PF00384 Molybdopterin oxidoreductase N4267_06055 PF01568 Molydopterin dinucleotide binding domain N4267_06075 PF01368 DHH family N4267_06075 PF02833 DHHA2 domain N4267_06095 PF00005 ABC transporter N4267_06100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_06100 PF00005 ABC transporter N4267_06105 PF00528 Binding-protein-dependent transport system inner membrane component N4267_06105 PF12911 N-terminal TM domain of oligopeptide transport permease C N4267_06110 PF00528 Binding-protein-dependent transport system inner membrane component N4267_06115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4267_06120 PF02954 Bacterial regulatory protein, Fis family N4267_06120 PF00158 Sigma-54 interaction domain N4267_06125 PF04012 PspA/IM30 family N4267_06140 PF00529 HlyD membrane-fusion protein of T1SS N4267_06140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4267_06145 PF13533 Biotin-lipoyl like N4267_06150 PF00873 AcrB/AcrD/AcrF family N4267_06155 PF03352 Methyladenine glycosylase N4267_06160 PF00582 Universal stress protein family N4267_06165 PF00999 Sodium/hydrogen exchanger family N4267_06165 PF02080 TrkA-C domain N4267_06165 PF02254 TrkA-N domain N4267_06170 PF01053 Cys/Met metabolism PLP-dependent enzyme N4267_06175 PF13396 Phospholipase_D-nuclease N-terminal N4267_06175 PF13091 PLD-like domain N4267_06180 PF00209 Sodium:neurotransmitter symporter family N4267_06185 PF00849 RNA pseudouridylate synthase N4267_06190 PF01066 CDP-alcohol phosphatidyltransferase N4267_06195 PF00005 ABC transporter N4267_06200 PF00528 Binding-protein-dependent transport system inner membrane component N4267_06205 PF13416 Bacterial extracellular solute-binding protein N4267_06215 PF06945 Protein of unknown function (DUF1289) N4267_06225 PF03222 Tryptophan/tyrosine permease family N4267_06235 PF01769 Divalent cation transporter N4267_06235 PF00571 CBS domain N4267_06235 PF03448 MgtE intracellular N domain N4267_06240 PF00072 Response regulator receiver domain N4267_06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_06240 PF09308 LuxQ, periplasmic N4267_06240 PF00512 His Kinase A (phospho-acceptor) domain N4267_06245 PF03707 Bacterial signalling protein N terminal repeat N4267_06245 PF00990 Diguanylate cyclase, GGDEF domain N4267_06245 PF00563 EAL domain N4267_06255 PF04151 Bacterial pre-peptidase C-terminal domain N4267_06255 PF01752 Collagenase N4267_06255 PF08453 Peptidase family M9 N-terminal N4267_06265 PF12793 Sugar transport-related sRNA regulator N-term N4267_06265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4267_06280 PF09101 Exotoxin A binding N4267_06280 PF09102 Exotoxin A, targeting N4267_06280 PF09009 Exotoxin A catalytic N4267_06290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_06290 PF00672 HAMP domain N4267_06290 PF12729 Four helix bundle sensory module for signal transduction N4267_06300 PF00360 Phytochrome region N4267_06300 PF00563 EAL domain N4267_06300 PF01590 GAF domain N4267_06300 PF00990 Diguanylate cyclase, GGDEF domain N4267_06305 PF01386 Ribosomal L25p family N4267_06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_06315 PF00486 Transcriptional regulatory protein, C terminal N4267_06315 PF00072 Response regulator receiver domain N4267_06325 PF04851 Type III restriction enzyme, res subunit N4267_06325 PF00271 Helicase conserved C-terminal domain N4267_06330 PF00849 RNA pseudouridylate synthase N4267_06330 PF01479 S4 domain N4267_06335 PF07690 Major Facilitator Superfamily N4267_06345 PF11066 Protein of unknown function (DUF2867) N4267_06345 PF13460 NAD(P)H-binding N4267_06350 PF01554 MatE N4267_06355 PF00005 ABC transporter N4267_06360 PF12704 MacB-like periplasmic core domain N4267_06360 PF02687 FtsX-like permease family N4267_06370 PF06965 Na+/H+ antiporter 1 N4267_06375 PF00202 Aminotransferase class-III N4267_06380 PF16653 Saccharopine dehydrogenase C-terminal domain N4267_06380 PF03435 Saccharopine dehydrogenase NADP binding domain N4267_06390 PF00691 OmpA family N4267_06390 PF05736 OprF membrane domain N4267_06395 PF02321 Outer membrane efflux protein N4267_06415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_06415 PF03466 LysR substrate binding domain N4267_06425 PF01863 Protein of unknown function DUF45 N4267_06430 PF05971 RNA methyltransferase N4267_06445 PF04204 Homoserine O-succinyltransferase N4267_06465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4267_06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_06480 PF00989 PAS fold N4267_06480 PF17203 Single cache domain 3 N4267_06480 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N4267_06485 PF12431 Transcriptional regulator N4267_06485 PF00072 Response regulator receiver domain N4267_06495 PF01584 CheW-like domain N4267_06495 PF00072 Response regulator receiver domain N4267_06515 PF00072 Response regulator receiver domain N4267_06515 PF00990 Diguanylate cyclase, GGDEF domain N4267_06540 PF07690 Major Facilitator Superfamily N4267_06545 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain N4267_06545 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain N4267_06550 PF10509 Galactokinase galactose-binding signature N4267_06550 PF08544 GHMP kinases C terminal N4267_06550 PF00288 GHMP kinases N terminal domain N4267_06555 PF01263 Aldose 1-epimerase N4267_06565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4267_06565 PF00205 Thiamine pyrophosphate enzyme, central domain N4267_06565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N4267_06570 PF03306 Alpha-acetolactate decarboxylase N4267_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_06575 PF03466 LysR substrate binding domain N4267_06580 PF17291 N-terminal domain of M60-like peptidases N4267_06580 PF13322 Domain of unknown function (DUF4092) N4267_06580 PF13402 Peptidase M60, enhancin and enhancin-like N4267_06590 PF00199 Catalase N4267_06590 PF06628 Catalase-related immune-responsive N4267_06600 PF00080 Copper/zinc superoxide dismutase (SODC) N4267_06605 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) N4267_06610 PF00361 Proton-conducting membrane transporter N4267_06610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N4267_06615 PF03466 LysR substrate binding domain N4267_06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_06620 PF00501 AMP-binding enzyme N4267_06620 PF13193 AMP-binding enzyme C-terminal domain N4267_06635 PF04266 ASCH domain N4267_06650 PF00206 Lyase N4267_06650 PF10415 Fumarase C C-terminus N4267_06660 PF01654 Cytochrome bd terminal oxidase subunit I N4267_06665 PF02322 Cytochrome bd terminal oxidase subunit II N4267_06670 PF00005 ABC transporter N4267_06670 PF02687 FtsX-like permease family N4267_06670 PF12704 MacB-like periplasmic core domain N4267_06675 PF00005 ABC transporter N4267_06675 PF12704 MacB-like periplasmic core domain N4267_06675 PF02687 FtsX-like permease family N4267_06680 PF00005 ABC transporter N4267_06680 PF02687 FtsX-like permease family N4267_06680 PF12704 MacB-like periplasmic core domain N4267_06690 PF00529 HlyD membrane-fusion protein of T1SS N4267_06700 PF00175 Oxidoreductase NAD-binding domain N4267_06705 PF04443 Acyl-protein synthetase, LuxE N4267_06710 PF00296 Luciferase-like monooxygenase N4267_06715 PF00296 Luciferase-like monooxygenase N4267_06720 PF02273 Acyl transferase N4267_06725 PF05893 Acyl-CoA reductase (LuxC) N4267_06730 PF09297 NADH pyrophosphatase zinc ribbon domain N4267_06730 PF00293 NUDIX domain N4267_06735 PF00709 Adenylosuccinate synthetase N4267_06750 PF00977 Histidine biosynthesis protein N4267_06755 PF00141 Peroxidase N4267_06760 PF00232 Glycosyl hydrolase family 1 N4267_06765 PF00356 Bacterial regulatory proteins, lacI family N4267_06770 PF01042 Endoribonuclease L-PSP N4267_06775 PF04074 YhcH/YjgK/YiaL N4267_06780 PF03009 Glycerophosphoryl diester phosphodiesterase family N4267_06785 PF00455 DeoR C terminal sensor domain N4267_06785 PF08220 DeoR-like helix-turn-helix domain N4267_06790 PF00005 ABC transporter N4267_06790 PF17912 MalK OB fold domain N4267_06795 PF00528 Binding-protein-dependent transport system inner membrane component N4267_06800 PF00528 Binding-protein-dependent transport system inner membrane component N4267_06805 PF13416 Bacterial extracellular solute-binding protein N4267_06815 PF01618 MotA/TolQ/ExbB proton channel family N4267_06820 PF01618 MotA/TolQ/ExbB proton channel family N4267_06825 PF02472 Biopolymer transport protein ExbD/TolR N4267_06830 PF03544 Gram-negative bacterial TonB protein C-terminal N4267_06840 PF01068 ATP dependent DNA ligase domain N4267_06840 PF14743 DNA ligase OB-like domain N4267_06850 PF01554 MatE N4267_06860 PF03881 Fructosamine kinase N4267_06870 PF00877 NlpC/P60 family N4267_06875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_06875 PF12729 Four helix bundle sensory module for signal transduction N4267_06875 PF00672 HAMP domain N4267_06885 PF03942 DTW domain N4267_06890 PF00480 ROK family N4267_06900 PF00994 Probable molybdopterin binding domain N4267_06900 PF03454 MoeA C-terminal region (domain IV) N4267_06900 PF03453 MoeA N-terminal region (domain I and II) N4267_06905 PF12804 MobA-like NTP transferase domain N4267_06910 PF00005 ABC transporter N4267_06910 PF08402 TOBE domain N4267_06915 PF00528 Binding-protein-dependent transport system inner membrane component N4267_06920 PF12849 PBP superfamily domain N4267_06925 PF00158 Sigma-54 interaction domain N4267_06925 PF02954 Bacterial regulatory protein, Fis family N4267_06925 PF00072 Response regulator receiver domain N4267_06930 PF00989 PAS fold N4267_06930 PF00512 His Kinase A (phospho-acceptor) domain N4267_06930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_06935 PF12848 ABC transporter N4267_06935 PF00005 ABC transporter N4267_06940 PF02634 FdhD/NarQ family N4267_06960 PF02613 Nitrate reductase delta subunit N4267_06970 PF01568 Molydopterin dinucleotide binding domain N4267_06970 PF00384 Molybdopterin oxidoreductase N4267_06970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4267_06975 PF13247 4Fe-4S dicluster domain N4267_06990 PF02146 Sir2 family N4267_06995 PF04461 Protein of unknown function (DUF520) N4267_07000 PF00793 DAHP synthetase I family N4267_07015 PF13509 S1 domain N4267_07015 PF17783 CvfB-like winged helix domain N4267_07020 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF N4267_07020 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF N4267_07020 PF01189 16S rRNA methyltransferase RsmB/F N4267_07025 PF02470 MlaD protein N4267_07030 PF04403 Paraquat-inducible protein A N4267_07035 PF00664 ABC transporter transmembrane region N4267_07035 PF00005 ABC transporter N4267_07040 PF13185 GAF domain N4267_07045 PF04352 ProQ/FINO family N4267_07045 PF17516 ProQ C-terminal domain N4267_07050 PF17804 Tail specific protease N-terminal domain N4267_07050 PF11818 C-terminal domain of tail specific protease (DUF3340) N4267_07050 PF00595 PDZ domain N4267_07050 PF03572 Peptidase family S41 N4267_07060 PF11940 Domain of unknown function (DUF3458) Ig-like fold N4267_07060 PF01433 Peptidase family M1 domain N4267_07060 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N4267_07070 PF05088 Bacterial NAD-glutamate dehydrogenase N4267_07075 PF01180 Dihydroorotate dehydrogenase N4267_07080 PF07126 Cell-division protein ZapC N4267_07085 PF10672 S-adenosylmethionine-dependent methyltransferase N4267_07085 PF02926 THUMP domain N4267_07085 PF01170 Putative RNA methylase family UPF0020 N4267_07095 PF00005 ABC transporter N4267_07095 PF12848 ABC transporter N4267_07095 PF16326 ABC transporter C-terminal domain N4267_07105 PF04957 Ribosome modulation factor N4267_07110 PF07977 FabA-like domain N4267_07115 PF13654 AAA domain N4267_07115 PF05362 Lon protease (S16) C-terminal proteolytic domain N4267_07120 PF17414 MatP C-terminal ribbon-helix-helix domain N4267_07120 PF06303 MatP N-terminal domain N4267_07135 PF12146 Serine aminopeptidase, S33 N4267_07135 PF16671 Actin cross-linking domain N4267_07135 PF11647 Membrane Localization Domain N4267_07135 PF07634 RtxA repeat N4267_07135 PF11713 Peptidase C80 family N4267_07140 PF02794 RTX toxin acyltransferase family N4267_07150 PF03412 Peptidase C39 family N4267_07150 PF00005 ABC transporter N4267_07150 PF00664 ABC transporter transmembrane region N4267_07160 PF03412 Peptidase C39 family N4267_07160 PF00005 ABC transporter N4267_07160 PF00664 ABC transporter transmembrane region N4267_07165 PF00512 His Kinase A (phospho-acceptor) domain N4267_07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_07165 PF09308 LuxQ, periplasmic N4267_07165 PF00072 Response regulator receiver domain N4267_07180 PF00115 Cytochrome C and Quinol oxidase polypeptide I N4267_07195 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP N4267_07195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N4267_07205 PF00403 Heavy-metal-associated domain N4267_07220 PF00027 Cyclic nucleotide-binding domain N4267_07220 PF13545 Crp-like helix-turn-helix domain N4267_07225 PF00582 Universal stress protein family N4267_07230 PF01171 PP-loop family N4267_07250 PF08402 TOBE domain N4267_07250 PF00005 ABC transporter N4267_07255 PF00528 Binding-protein-dependent transport system inner membrane component N4267_07260 PF00528 Binding-protein-dependent transport system inner membrane component N4267_07265 PF13416 Bacterial extracellular solute-binding protein N4267_07270 PF13416 Bacterial extracellular solute-binding protein N4267_07285 PF01235 Sodium:alanine symporter family N4267_07290 PF01810 LysE type translocator N4267_07320 PF16671 Actin cross-linking domain N4267_07320 PF04717 Type VI secretion system, phage-baseplate injector N4267_07325 PF05638 Type VI secretion system effector, Hcp N4267_07330 PF02074 Carboxypeptidase Taq (M32) metallopeptidase N4267_07350 PF00270 DEAD/DEAH box helicase N4267_07350 PF00271 Helicase conserved C-terminal domain N4267_07355 PF00893 Small Multidrug Resistance protein N4267_07360 PF03441 FAD binding domain of DNA photolyase N4267_07360 PF00875 DNA photolyase N4267_07365 PF07690 Major Facilitator Superfamily N4267_07370 PF03466 LysR substrate binding domain N4267_07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_07380 PF01979 Amidohydrolase family N4267_07385 PF10437 Bacterial lipoate protein ligase C-terminus N4267_07385 PF03099 Biotin/lipoate A/B protein ligase family N4267_07390 PF00012 Hsp70 protein N4267_07400 PF00271 Helicase conserved C-terminal domain N4267_07400 PF04408 Helicase associated domain (HA2) N4267_07400 PF11898 Domain of unknown function (DUF3418) N4267_07400 PF00270 DEAD/DEAH box helicase N4267_07400 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N4267_07420 PF00990 Diguanylate cyclase, GGDEF domain N4267_07420 PF00563 EAL domain N4267_07420 PF03707 Bacterial signalling protein N terminal repeat N4267_07430 PF00012 Hsp70 protein N4267_07435 PF00012 Hsp70 protein N4267_07440 PF00990 Diguanylate cyclase, GGDEF domain N4267_07450 PF03707 Bacterial signalling protein N terminal repeat N4267_07450 PF00990 Diguanylate cyclase, GGDEF domain N4267_07450 PF00563 EAL domain N4267_07470 PF06508 Queuosine biosynthesis protein QueC N4267_07475 PF04055 Radical SAM superfamily N4267_07485 PF14824 Sirohaem biosynthesis protein central N4267_07485 PF10414 Sirohaem synthase dimerisation region N4267_07485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4267_07490 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_07495 PF00528 Binding-protein-dependent transport system inner membrane component N4267_07500 PF00528 Binding-protein-dependent transport system inner membrane component N4267_07505 PF00005 ABC transporter N4267_07510 PF01027 Inhibitor of apoptosis-promoting Bax1 N4267_07515 PF04358 DsrC like protein N4267_07520 PF00708 Acylphosphatase N4267_07525 PF10672 S-adenosylmethionine-dependent methyltransferase N4267_07525 PF17785 PUA-like domain N4267_07530 PF00990 Diguanylate cyclase, GGDEF domain N4267_07535 PF00462 Glutaredoxin N4267_07535 PF08534 Redoxin N4267_07540 PF01627 Hpt domain N4267_07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_07540 PF00672 HAMP domain N4267_07540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N4267_07540 PF00512 His Kinase A (phospho-acceptor) domain N4267_07540 PF00072 Response regulator receiver domain N4267_07545 PF00072 Response regulator receiver domain N4267_07550 PF02798 Glutathione S-transferase, N-terminal domain N4267_07550 PF14497 Glutathione S-transferase, C-terminal domain N4267_07560 PF04209 homogentisate 1,2-dioxygenase N4267_07565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4267_07570 PF07687 Peptidase dimerisation domain N4267_07570 PF01546 Peptidase family M20/M25/M40 N4267_07585 PF13193 AMP-binding enzyme C-terminal domain N4267_07585 PF16177 Acetyl-coenzyme A synthetase N-terminus N4267_07585 PF00501 AMP-binding enzyme N4267_07590 PF04303 PrpF protein N4267_07595 PF00330 Aconitase family (aconitate hydratase) N4267_07595 PF00694 Aconitase C-terminal domain N4267_07600 PF00285 Citrate synthase, C-terminal domain N4267_07610 PF00392 Bacterial regulatory proteins, gntR family N4267_07610 PF07729 FCD domain N4267_07625 PF01970 Tripartite tricarboxylate transporter TctA family N4267_07645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4267_07645 PF00529 HlyD membrane-fusion protein of T1SS N4267_07660 PF02653 Branched-chain amino acid transport system / permease component N4267_07665 PF00005 ABC transporter N4267_07670 PF13407 Periplasmic binding protein domain N4267_07690 PF00486 Transcriptional regulatory protein, C terminal N4267_07690 PF00072 Response regulator receiver domain N4267_07695 PF00672 HAMP domain N4267_07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_07695 PF00512 His Kinase A (phospho-acceptor) domain N4267_07700 PF06629 MltA-interacting protein MipA N4267_07705 PF04393 Protein of unknown function (DUF535) N4267_07710 PF02954 Bacterial regulatory protein, Fis family N4267_07710 PF00072 Response regulator receiver domain N4267_07710 PF00158 Sigma-54 interaction domain N4267_07715 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_07715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_07715 PF00512 His Kinase A (phospho-acceptor) domain N4267_07720 PF00939 Sodium:sulfate symporter transmembrane region N4267_07725 PF00672 HAMP domain N4267_07725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_07730 PF00842 Alanine racemase, C-terminal domain N4267_07730 PF01168 Alanine racemase, N-terminal domain N4267_07735 PF00892 EamA-like transporter family N4267_07745 PF13302 Acetyltransferase (GNAT) domain N4267_07750 PF18024 Helix-turn-helix domain N4267_07750 PF00158 Sigma-54 interaction domain N4267_07755 PF05128 Domain of unknown function (DUF697) N4267_07760 PF04317 YcjX-like family, DUF463 N4267_07770 PF01797 Transposase IS200 like N4267_07780 PF00425 chorismate binding enzyme N4267_07780 PF04715 Anthranilate synthase component I, N terminal region N4267_07785 PF00293 NUDIX domain N4267_07790 PF03222 Tryptophan/tyrosine permease family N4267_07795 PF03313 Serine dehydratase alpha chain N4267_07795 PF03315 Serine dehydratase beta chain N4267_07800 PF01242 6-pyruvoyl tetrahydropterin synthase N4267_07805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_07805 PF00672 HAMP domain N4267_07805 PF12729 Four helix bundle sensory module for signal transduction N4267_07810 PF00152 tRNA synthetases class II (D, K and N) N4267_07810 PF01336 OB-fold nucleic acid binding domain N4267_07815 PF08543 Phosphomethylpyrimidine kinase N4267_07820 PF00672 HAMP domain N4267_07820 PF01966 HD domain N4267_07825 PF00155 Aminotransferase class I and II N4267_07840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_07840 PF00672 HAMP domain N4267_07840 PF17200 Single Cache domain 2 N4267_07845 PF04349 Periplasmic glucan biosynthesis protein, MdoG N4267_07850 PF13506 Glycosyl transferase family 21 N4267_07855 PF02028 BCCT, betaine/carnitine/choline family transporter N4267_07860 PF01047 MarR family N4267_07865 PF00196 Bacterial regulatory proteins, luxR family N4267_07865 PF00072 Response regulator receiver domain N4267_07870 PF17200 Single Cache domain 2 N4267_07870 PF07730 Histidine kinase N4267_07875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N4267_07885 PF03480 Bacterial extracellular solute-binding protein, family 7 N4267_07900 PF00753 Metallo-beta-lactamase superfamily N4267_07905 PF05951 Bacterial protein of unknown function (DUF882) N4267_07935 PF00925 GTP cyclohydrolase II N4267_07945 PF07690 Major Facilitator Superfamily N4267_07955 PF00581 Rhodanese-like domain N4267_07955 PF17773 UPF0176 acylphosphatase like domain N4267_07960 PF03989 DNA gyrase C-terminal domain, beta-propeller N4267_07960 PF00521 DNA gyrase/topoisomerase IV, subunit A N4267_07970 PF03477 ATP cone domain N4267_07970 PF00317 Ribonucleotide reductase, all-alpha domain N4267_07970 PF02867 Ribonucleotide reductase, barrel domain N4267_07975 PF00268 Ribonucleotide reductase, small chain N4267_07980 PF00970 Oxidoreductase FAD-binding domain N4267_07980 PF00111 2Fe-2S iron-sulfur cluster binding domain N4267_07980 PF00175 Oxidoreductase NAD-binding domain N4267_07990 PF00994 Probable molybdopterin binding domain N4267_08005 PF00672 HAMP domain N4267_08005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_08005 PF17200 Single Cache domain 2 N4267_08020 PF00005 ABC transporter N4267_08025 PF01032 FecCD transport family N4267_08030 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N4267_08040 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N4267_08045 PF02654 Cobalamin-5-phosphate synthase N4267_08050 PF02277 Phosphoribosyltransferase N4267_08055 PF01641 SelR domain N4267_08060 PF00375 Sodium:dicarboxylate symporter family N4267_08065 PF08411 Exonuclease C-terminal N4267_08065 PF00929 Exonuclease N4267_08070 PF03788 LrgA family N4267_08075 PF04172 LrgB-like family N4267_08080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4267_08080 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region N4267_08090 PF02222 ATP-grasp domain N4267_08095 PF05724 Thiopurine S-methyltransferase (TPMT) N4267_08105 PF00216 Bacterial DNA-binding protein N4267_08110 PF03147 Ferredoxin-fold anticodon binding domain N4267_08110 PF03484 tRNA synthetase B5 domain N4267_08110 PF01588 Putative tRNA binding domain N4267_08110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N4267_08110 PF03483 B3/4 domain N4267_08115 PF01409 tRNA synthetases class II core domain (F) N4267_08115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N4267_08125 PF00990 Diguanylate cyclase, GGDEF domain N4267_08125 PF00072 Response regulator receiver domain N4267_08150 PF01066 CDP-alcohol phosphatidyltransferase N4267_08155 PF01541 GIY-YIG catalytic domain N4267_08155 PF02151 UvrB/uvrC motif N4267_08155 PF08459 UvrC Helix-hairpin-helix N-terminal N4267_08160 PF00196 Bacterial regulatory proteins, luxR family N4267_08160 PF00072 Response regulator receiver domain N4267_08165 PF00136 DNA polymerase family B N4267_08165 PF03104 DNA polymerase family B, exonuclease domain N4267_08170 PF00563 EAL domain N4267_08170 PF00990 Diguanylate cyclase, GGDEF domain N4267_08170 PF13426 PAS domain N4267_08180 PF01132 Elongation factor P (EF-P) OB domain N4267_08180 PF08207 Elongation factor P (EF-P) KOW-like domain N4267_08180 PF09285 Elongation factor P, C-terminal N4267_08185 PF04269 Protein of unknown function, DUF440 N4267_08195 PF00392 Bacterial regulatory proteins, gntR family N4267_08195 PF07702 UTRA domain N4267_08200 PF01979 Amidohydrolase family N4267_08205 PF00491 Arginase family N4267_08210 PF01175 Urocanase Rossmann-like domain N4267_08210 PF17392 Urocanase C-terminal domain N4267_08210 PF17391 Urocanase N-terminal domain N4267_08215 PF00221 Aromatic amino acid lyase N4267_08225 PF00089 Trypsin N4267_08230 PF04191 Phospholipid methyltransferase N4267_08235 PF02913 FAD linked oxidases, C-terminal domain N4267_08235 PF01565 FAD binding domain N4267_08235 PF13183 4Fe-4S dicluster domain N4267_08250 PF13488 Glycine zipper N4267_08250 PF00691 OmpA family N4267_08270 PF01259 SAICAR synthetase N4267_08280 PF03949 Malic enzyme, NAD binding domain N4267_08280 PF00390 Malic enzyme, N-terminal domain N4267_08290 PF02698 DUF218 domain N4267_08295 PF00990 Diguanylate cyclase, GGDEF domain N4267_08295 PF08448 PAS fold N4267_08300 PF00266 Aminotransferase class-V N4267_08310 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_08315 PF00664 ABC transporter transmembrane region N4267_08315 PF00005 ABC transporter N4267_08320 PF00664 ABC transporter transmembrane region N4267_08320 PF00005 ABC transporter N4267_08325 PF01479 S4 domain N4267_08325 PF00849 RNA pseudouridylate synthase N4267_08330 PF01300 Telomere recombination N4267_08335 PF02811 PHP domain N4267_08340 PF08056 Tryptophan operon leader peptide N4267_08345 PF04715 Anthranilate synthase component I, N terminal region N4267_08345 PF00425 chorismate binding enzyme N4267_08350 PF00117 Glutamine amidotransferase class-I N4267_08355 PF00591 Glycosyl transferase family, a/b domain N4267_08355 PF02885 Glycosyl transferase family, helical bundle domain N4267_08360 PF00218 Indole-3-glycerol phosphate synthase N4267_08360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N4267_08365 PF00291 Pyridoxal-phosphate dependent enzyme N4267_08370 PF00290 Tryptophan synthase alpha chain N4267_08375 PF00375 Sodium:dicarboxylate symporter family N4267_08380 PF00265 Thymidine kinase N4267_08385 PF02938 GAD domain N4267_08385 PF00152 tRNA synthetases class II (D, K and N) N4267_08385 PF01336 OB-fold nucleic acid binding domain N4267_08390 PF01904 Protein of unknown function DUF72 N4267_08395 PF13649 Methyltransferase domain N4267_08400 PF08003 Protein of unknown function (DUF1698) N4267_08405 PF08443 RimK-like ATP-grasp domain N4267_08405 PF18030 RimK PreATP-grasp domain N4267_08420 PF00266 Aminotransferase class-V N4267_08430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_08430 PF00512 His Kinase A (phospho-acceptor) domain N4267_08430 PF00989 PAS fold N4267_08445 PF04994 TfoX C-terminal domain N4267_08445 PF04993 TfoX N-terminal domain N4267_08455 PF03956 Lysine exporter LysO N4267_08465 PF00282 Pyridoxal-dependent decarboxylase conserved domain N4267_08470 PF01418 Helix-turn-helix domain, rpiR family N4267_08470 PF01380 SIS domain N4267_08475 PF00171 Aldehyde dehydrogenase family N4267_08475 PF00465 Iron-containing alcohol dehydrogenase N4267_08480 PF00462 Glutaredoxin N4267_08485 PF02080 TrkA-C domain N4267_08485 PF06826 Predicted Permease Membrane Region N4267_08490 PF07724 AAA domain (Cdc48 subfamily) N4267_08490 PF00004 ATPase family associated with various cellular activities (AAA) N4267_08490 PF10431 C-terminal, D2-small domain, of ClpB protein N4267_08490 PF02861 Clp amino terminal domain, pathogenicity island component N4267_08490 PF17871 AAA lid domain N4267_08495 PF02617 ATP-dependent Clp protease adaptor protein ClpS N4267_08500 PF00313 'Cold-shock' DNA-binding domain N4267_08505 PF03971 Monomeric isocitrate dehydrogenase N4267_08510 PF00849 RNA pseudouridylate synthase N4267_08515 PF01502 Phosphoribosyl-AMP cyclohydrolase N4267_08515 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N4267_08520 PF00977 Histidine biosynthesis protein N4267_08525 PF00977 Histidine biosynthesis protein N4267_08530 PF00117 Glutamine amidotransferase class-I N4267_08535 PF08645 Polynucleotide kinase 3 phosphatase N4267_08535 PF00475 Imidazoleglycerol-phosphate dehydratase N4267_08540 PF00155 Aminotransferase class I and II N4267_08545 PF00815 Histidinol dehydrogenase N4267_08550 PF01634 ATP phosphoribosyltransferase N4267_08550 PF08029 HisG, C-terminal domain N4267_08555 PF03553 Na+/H+ antiporter family N4267_08560 PF00816 H-NS histone family N4267_08565 PF00294 pfkB family carbohydrate kinase N4267_08575 PF04356 Protein of unknown function (DUF489) N4267_08580 PF08328 Adenylosuccinate lyase C-terminal N4267_08580 PF00206 Lyase N4267_08590 PF16036 Chalcone isomerase-like N4267_08615 PF00106 short chain dehydrogenase N4267_08625 PF01435 Peptidase family M48 N4267_08640 PF08241 Methyltransferase domain N4267_08645 PF00155 Aminotransferase class I and II N4267_08650 PF04055 Radical SAM superfamily N4267_08650 PF06968 Biotin and Thiamin Synthesis associated domain N4267_08655 PF00202 Aminotransferase class-III N4267_08660 PF02403 Seryl-tRNA synthetase N-terminal domain N4267_08660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4267_08665 PF00004 ATPase family associated with various cellular activities (AAA) N4267_08665 PF16193 AAA C-terminal domain N4267_08665 PF12002 MgsA AAA+ ATPase C terminal N4267_08670 PF03548 Outer membrane lipoprotein carrier protein LolA N4267_08675 PF02810 SEC-C motif N4267_08675 PF07517 SecA DEAD-like domain N4267_08675 PF01043 SecA preprotein cross-linking domain N4267_08675 PF07516 SecA Wing and Scaffold domain N4267_08680 PF01207 Dihydrouridine synthase (Dus) N4267_08685 PF00990 Diguanylate cyclase, GGDEF domain N4267_08690 PF00005 ABC transporter N4267_08695 PF02653 Branched-chain amino acid transport system / permease component N4267_08705 PF09905 DNA-binding protein VF530 N4267_08710 PF04217 Protein of unknown function, DUF412 N4267_08715 PF00871 Acetokinase family N4267_08720 PF07085 DRTGG domain N4267_08720 PF01515 Phosphate acetyl/butaryl transferase N4267_08725 PF13409 Glutathione S-transferase, N-terminal domain N4267_08730 PF00005 ABC transporter N4267_08730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_08735 PF00005 ABC transporter N4267_08735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_08740 PF00528 Binding-protein-dependent transport system inner membrane component N4267_08740 PF12911 N-terminal TM domain of oligopeptide transport permease C N4267_08745 PF00528 Binding-protein-dependent transport system inner membrane component N4267_08750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4267_08760 PF08448 PAS fold N4267_08760 PF00512 His Kinase A (phospho-acceptor) domain N4267_08760 PF00072 Response regulator receiver domain N4267_08760 PF13188 PAS domain N4267_08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_08765 PF02954 Bacterial regulatory protein, Fis family N4267_08765 PF00072 Response regulator receiver domain N4267_08765 PF00158 Sigma-54 interaction domain N4267_08770 PF00563 EAL domain N4267_08770 PF00990 Diguanylate cyclase, GGDEF domain N4267_08770 PF03707 Bacterial signalling protein N terminal repeat N4267_08770 PF13188 PAS domain N4267_08775 PF00989 PAS fold N4267_08775 PF00512 His Kinase A (phospho-acceptor) domain N4267_08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_08780 PF00512 His Kinase A (phospho-acceptor) domain N4267_08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_08780 PF13426 PAS domain N4267_08780 PF00989 PAS fold N4267_08780 PF13188 PAS domain N4267_08790 PF00072 Response regulator receiver domain N4267_08805 PF01300 Telomere recombination N4267_08805 PF03481 Putative GTP-binding controlling metal-binding N4267_08820 PF01161 Phosphatidylethanolamine-binding protein N4267_08830 PF00704 Glycosyl hydrolases family 18 N4267_08830 PF06483 Chitinase C N4267_08845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4267_08845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4267_08850 PF01022 Bacterial regulatory protein, arsR family N4267_08860 PF08448 PAS fold N4267_08860 PF00990 Diguanylate cyclase, GGDEF domain N4267_08870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4267_08885 PF01037 Lrp/AsnC ligand binding domain N4267_08885 PF13404 AsnC-type helix-turn-helix domain N4267_08890 PF00291 Pyridoxal-phosphate dependent enzyme N4267_08895 PF08496 Peptidase family S49 N-terminal N4267_08895 PF01343 Peptidase family S49 N4267_08900 PF00106 short chain dehydrogenase N4267_08905 PF03692 Putative zinc- or iron-chelating domain N4267_08910 PF03692 Putative zinc- or iron-chelating domain N4267_08915 PF02132 RecR protein N4267_08915 PF13662 Toprim domain N4267_08920 PF02575 YbaB/EbfC DNA-binding family N4267_08925 PF12170 DNA polymerase III tau subunit V interacting with alpha N4267_08925 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding N4267_08925 PF12169 DNA polymerase III subunits gamma and tau domain III N4267_08930 PF00156 Phosphoribosyl transferase domain N4267_08935 PF04304 Protein of unknown function (DUF454) N4267_08945 PF00072 Response regulator receiver domain N4267_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_08950 PF03466 LysR substrate binding domain N4267_08955 PF00881 Nitroreductase family N4267_08960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4267_08960 PF00378 Enoyl-CoA hydratase/isomerase N4267_08960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4267_08965 PF00108 Thiolase, N-terminal domain N4267_08965 PF02803 Thiolase, C-terminal domain N4267_08970 PF08281 Sigma-70, region 4 N4267_08970 PF04542 Sigma-70 region 2 N4267_08980 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N4267_08985 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N4267_08990 PF01451 Low molecular weight phosphotyrosine protein phosphatase N4267_08995 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP N4267_08995 PF12557 Cob(I)alamin adenosyltransferase N terminal N4267_09000 PF05170 AsmA family N4267_09005 PF00485 Phosphoribulokinase / Uridine kinase family N4267_09010 PF10609 NUBPL iron-transfer P-loop NTPase N4267_09015 PF09334 tRNA synthetases class I (M) N4267_09015 PF01588 Putative tRNA binding domain N4267_09025 PF01048 Phosphorylase superfamily N4267_09030 PF00403 Heavy-metal-associated domain N4267_09035 PF01743 Poly A polymerase head domain N4267_09035 PF00571 CBS domain N4267_09040 PF00990 Diguanylate cyclase, GGDEF domain N4267_09040 PF07694 5TMR of 5TMR-LYT N4267_09045 PF02391 MoaE protein N4267_09050 PF02597 ThiS family N4267_09055 PF01967 MoaC family N4267_09060 PF00994 Probable molybdopterin binding domain N4267_09065 PF06463 Molybdenum Cofactor Synthesis C N4267_09065 PF04055 Radical SAM superfamily N4267_09070 PF01933 Uncharacterised protein family UPF0052 N4267_09075 PF01627 Hpt domain N4267_09080 PF00158 Sigma-54 interaction domain N4267_09080 PF02954 Bacterial regulatory protein, Fis family N4267_09080 PF00072 Response regulator receiver domain N4267_09085 PF04851 Type III restriction enzyme, res subunit N4267_09085 PF02151 UvrB/uvrC motif N4267_09085 PF12344 Ultra-violet resistance protein B N4267_09085 PF17757 UvrB interaction domain N4267_09085 PF00271 Helicase conserved C-terminal domain N4267_09095 PF02508 Rnf-Nqr subunit, membrane protein N4267_09100 PF04060 Putative Fe-S cluster N4267_09105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N4267_09105 PF10531 SLBB domain N4267_09105 PF13375 RnfC Barrel sandwich hybrid domain N4267_09105 PF12838 4Fe-4S dicluster domain N4267_09110 PF03116 NQR2, RnfD, RnfE family N4267_09115 PF04205 FMN-binding domain N4267_09120 PF02508 Rnf-Nqr subunit, membrane protein N4267_09125 PF00633 Helix-hairpin-helix motif N4267_09125 PF00730 HhH-GPD superfamily base excision DNA repair protein N4267_09125 PF10576 Iron-sulfur binding domain of endonuclease III N4267_09130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4267_09135 PF10952 Protein of unknown function (DUF2753) N4267_09140 PF18393 MotY N-terminal domain N4267_09140 PF00691 OmpA family N4267_09150 PF00929 Exonuclease N4267_09155 PF13726 Na+-H+ antiporter family N4267_09155 PF03553 Na+/H+ antiporter family N4267_09160 PF00156 Phosphoribosyl transferase domain N4267_09165 PF02674 Colicin V production protein N4267_09170 PF05036 Sporulation related domain N4267_09175 PF08245 Mur ligase middle domain N4267_09175 PF02875 Mur ligase family, glutamate ligase domain N4267_09180 PF01039 Carboxyl transferase domain N4267_09180 PF17848 Acetyl-coA carboxylase zinc finger domain N4267_09185 PF01416 tRNA pseudouridine synthase N4267_09200 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4267_09200 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N4267_09205 PF00367 phosphotransferase system, EIIB N4267_09205 PF02378 Phosphotransferase system, EIIC N4267_09205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N4267_09210 PF01979 Amidohydrolase family N4267_09215 PF00480 ROK family N4267_09215 PF01047 MarR family N4267_09220 PF02254 TrkA-N domain N4267_09220 PF00999 Sodium/hydrogen exchanger family N4267_09225 PF13537 Glutamine amidotransferase domain N4267_09225 PF00733 Asparagine synthase N4267_09230 PF02357 Transcription termination factor nusG N4267_09235 PF00854 POT family N4267_09240 PF00762 Ferrochelatase N4267_09245 PF05191 Adenylate kinase, active site lid N4267_09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_09250 PF00183 Hsp90 protein N4267_09255 PF00486 Transcriptional regulatory protein, C terminal N4267_09260 PF17323 Trans-membrane regulatory protein ToxS N4267_09270 PF12850 Calcineurin-like phosphoesterase superfamily domain N4267_09275 PF08338 Domain of unknown function (DUF1731) N4267_09275 PF01370 NAD dependent epimerase/dehydratase family N4267_09280 PF00106 short chain dehydrogenase N4267_09285 PF00085 Thioredoxin N4267_09290 PF16200 C-terminal region of band_7 N4267_09290 PF01145 SPFH domain / Band 7 family N4267_09295 PF01957 NfeD-like C-terminal, partner-binding N4267_09300 PF13411 MerR HTH family regulatory protein N4267_09310 PF13609 Gram-negative porin N4267_09315 PF00533 BRCA1 C Terminus (BRCT) domain N4267_09315 PF01653 NAD-dependent DNA ligase adenylation domain N4267_09315 PF03120 NAD-dependent DNA ligase OB-fold domain N4267_09315 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N4267_09315 PF12826 Helix-hairpin-helix motif N4267_09320 PF04354 ZipA, C-terminal FtsZ-binding domain N4267_09330 PF00291 Pyridoxal-phosphate dependent enzyme N4267_09335 PF00381 PTS HPr component phosphorylation site N4267_09340 PF02896 PEP-utilising enzyme, TIM barrel domain N4267_09340 PF00391 PEP-utilising enzyme, mobile domain N4267_09340 PF05524 PEP-utilising enzyme, N-terminal N4267_09345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N4267_09350 PF01494 FAD binding domain N4267_09355 PF04055 Radical SAM superfamily N4267_09355 PF01938 TRAM domain N4267_09355 PF00919 Uncharacterized protein family UPF0004 N4267_09360 PF02562 PhoH-like protein N4267_09365 PF02130 Uncharacterized protein family UPF0054 N4267_09370 PF00571 CBS domain N4267_09370 PF03471 Transporter associated domain N4267_09375 PF00795 Carbon-nitrogen hydrolase N4267_09380 PF07295 Zinc-ribbon containing domain N4267_09385 PF08264 Anticodon-binding domain of tRNA N4267_09385 PF00133 tRNA synthetases class I (I, L, M and V) N4267_09385 PF13603 Leucyl-tRNA synthetase, Domain 2 N4267_09390 PF04390 Lipopolysaccharide-assembly N4267_09395 PF14840 Processivity clamp loader gamma complex DNA pol III C-term N4267_09395 PF06144 DNA polymerase III, delta subunit N4267_09405 PF02590 Predicted SPOUT methyltransferase N4267_09410 PF03717 Penicillin-binding Protein dimerisation domain N4267_09410 PF00905 Penicillin binding protein transpeptidase domain N4267_09415 PF01098 Cell cycle protein N4267_09420 PF03330 Lytic transglycolase N4267_09420 PF05036 Sporulation related domain N4267_09425 PF07943 Penicillin-binding protein 5, C-terminal domain N4267_09425 PF00768 D-alanyl-D-alanine carboxypeptidase N4267_09430 PF04359 Protein of unknown function (DUF493) N4267_09435 PF03099 Biotin/lipoate A/B protein ligase family N4267_09440 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family N4267_09440 PF04055 Radical SAM superfamily N4267_09450 PF00464 Serine hydroxymethyltransferase N4267_09470 PF02706 Chain length determinant protein N4267_09470 PF13614 AAA domain N4267_09470 PF13807 G-rich domain on putative tyrosine kinase N4267_09475 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N4267_09475 PF10531 SLBB domain N4267_09475 PF02563 Polysaccharide biosynthesis/export protein N4267_09485 PF02397 Bacterial sugar transferase N4267_09500 PF12561 ToxR activated gene A lipoprotein domain N4267_09500 PF17945 Beta/Gamma crystallin N4267_09515 PF03808 Glycosyl transferase WecB/TagA/CpsF family N4267_09525 PF00862 Sucrose synthase N4267_09525 PF00534 Glycosyl transferases group 1 N4267_09535 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_09555 PF12464 Maltose acetyltransferase N4267_09555 PF14602 Hexapeptide repeat of succinyl-transferase N4267_09560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N4267_09560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4267_09560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4267_09565 PF02350 UDP-N-acetylglucosamine 2-epimerase N4267_09570 PF01451 Low molecular weight phosphotyrosine protein phosphatase N4267_09575 PF00873 AcrB/AcrD/AcrF family N4267_09580 PF13533 Biotin-lipoyl like N4267_09605 PF00128 Alpha amylase, catalytic domain N4267_09605 PF16657 Maltogenic Amylase, C-terminal domain N4267_09610 PF00367 phosphotransferase system, EIIB N4267_09610 PF02378 Phosphotransferase system, EIIC N4267_09615 PF00356 Bacterial regulatory proteins, lacI family N4267_09625 PF00005 ABC transporter N4267_09625 PF09383 NIL domain N4267_09630 PF00528 Binding-protein-dependent transport system inner membrane component N4267_09635 PF03180 NLPA lipoprotein N4267_09640 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) N4267_09645 PF07348 Syd protein (SUKH-2) N4267_09650 PF14489 QueF-like protein N4267_09650 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N4267_09660 PF00990 Diguanylate cyclase, GGDEF domain N4267_09665 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases N4267_09665 PF03641 Possible lysine decarboxylase N4267_09665 PF11892 Domain of unknown function (DUF3412) N4267_09670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N4267_09670 PF01367 5'-3' exonuclease, C-terminal SAM fold N4267_09675 PF04241 Protein of unknown function (DUF423) N4267_09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_09680 PF03466 LysR substrate binding domain N4267_09685 PF02568 Thiamine biosynthesis protein (ThiI) N4267_09685 PF02926 THUMP domain N4267_09690 PF13677 Membrane MotB of proton-channel complex MotA/MotB N4267_09690 PF00691 OmpA family N4267_09695 PF01618 MotA/TolQ/ExbB proton channel family N4267_09705 PF02609 Exonuclease VII small subunit N4267_09710 PF00348 Polyprenyl synthetase N4267_09715 PF02780 Transketolase, C-terminal domain N4267_09715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N4267_09715 PF02779 Transketolase, pyrimidine binding domain N4267_09720 PF00849 RNA pseudouridylate synthase N4267_09725 PF04287 tRNA pseudouridine synthase C N4267_09740 PF13302 Acetyltransferase (GNAT) domain N4267_09750 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N4267_09755 PF03806 AbgT putative transporter family N4267_09760 PF00444 Ribosomal protein L36 N4267_09765 PF01197 Ribosomal protein L31 N4267_09770 PF18389 TrmO C-terminal domain N4267_09770 PF01980 tRNA-methyltransferase O N4267_09775 PF04073 Aminoacyl-tRNA editing domain N4267_09775 PF03129 Anticodon binding domain N4267_09775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4267_09785 PF06786 Uncharacterised protein family (UPF0253) N4267_09795 PF02769 AIR synthase related protein, C-terminal domain N4267_09795 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N4267_09795 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N4267_09805 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_09805 PF01464 Transglycosylase SLT domain N4267_09815 PF14437 MafB19-like deaminase N4267_09820 PF03806 AbgT putative transporter family N4267_09845 PF00114 Pilin (bacterial filament) N4267_09845 PF07963 Prokaryotic N-terminal methylation motif N4267_09850 PF01556 DnaJ C terminal domain N4267_09850 PF00684 DnaJ central domain N4267_09850 PF00226 DnaJ domain N4267_09855 PF00012 Hsp70 protein N4267_09865 PF01025 GrpE N4267_09870 PF01513 ATP-NAD kinase N4267_09875 PF02463 RecF/RecN/SMC N terminal domain N4267_09880 PF04355 SmpA / OmlA family N4267_09885 PF03658 RnfH family Ubiquitin N4267_09890 PF03364 Polyketide cyclase / dehydrase and lipid transport N4267_09895 PF01668 SmpB protein N4267_09905 PF13356 Arm DNA-binding domain N4267_09905 PF00589 Phage integrase family N4267_09910 PF02384 N-6 DNA Methylase N4267_09910 PF12161 HsdM N-terminal domain N4267_09925 PF01420 Type I restriction modification DNA specificity domain N4267_09930 PF08463 EcoEI R protein C-terminal N4267_09930 PF00271 Helicase conserved C-terminal domain N4267_09930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N4267_09930 PF04851 Type III restriction enzyme, res subunit N4267_09965 PF05638 Type VI secretion system effector, Hcp N4267_09970 PF04717 Type VI secretion system, phage-baseplate injector N4267_10025 PF04002 RadC-like JAB domain N4267_10105 PF00037 4Fe-4S binding domain N4267_10105 PF11953 Domain of unknown function (DUF3470) N4267_10110 PF00588 SpoU rRNA Methylase family N4267_10110 PF08032 RNA 2'-O ribose methyltransferase substrate binding N4267_10120 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N4267_10125 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase N4267_10130 PF04223 Citrate lyase, alpha subunit (CitF) N4267_10135 PF03328 HpcH/HpaI aldolase/citrate lyase family N4267_10140 PF06857 Malonate decarboxylase delta subunit (MdcD) N4267_10145 PF08218 Citrate lyase ligase C-terminal domain N4267_10150 PF03390 2-hydroxycarboxylate transporter family N4267_10155 PF04277 Oxaloacetate decarboxylase, gamma chain N4267_10160 PF00364 Biotin-requiring enzyme N4267_10160 PF00682 HMGL-like N4267_10160 PF02436 Conserved carboxylase domain N4267_10165 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N4267_10170 PF17203 Single cache domain 3 N4267_10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_10175 PF00072 Response regulator receiver domain N4267_10175 PF12431 Transcriptional regulator N4267_10195 PF01266 FAD dependent oxidoreductase N4267_10200 PF01235 Sodium:alanine symporter family N4267_10205 PF14864 Alkyl sulfatase C-terminal N4267_10205 PF14863 Alkyl sulfatase dimerisation N4267_10205 PF00753 Metallo-beta-lactamase superfamily N4267_10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_10210 PF03466 LysR substrate binding domain N4267_10215 PF17837 4'-phosphopantetheinyl transferase N-terminal domain N4267_10215 PF01648 4'-phosphopantetheinyl transferase superfamily N4267_10220 PF00005 ABC transporter N4267_10225 PF01032 FecCD transport family N4267_10230 PF01032 FecCD transport family N4267_10235 PF01497 Periplasmic binding protein N4267_10250 PF00425 chorismate binding enzyme N4267_10255 PF13193 AMP-binding enzyme C-terminal domain N4267_10255 PF00501 AMP-binding enzyme N4267_10260 PF00857 Isochorismatase family N4267_10260 PF00550 Phosphopantetheine attachment site N4267_10265 PF01184 GPR1/FUN34/yaaH family N4267_10270 PF00704 Glycosyl hydrolases family 18 N4267_10270 PF06483 Chitinase C N4267_10275 PF01510 N-acetylmuramoyl-L-alanine amidase N4267_10280 PF05199 GMC oxidoreductase N4267_10280 PF00732 GMC oxidoreductase N4267_10285 PF02540 NAD synthase N4267_10285 PF00958 GMP synthase C terminal domain N4267_10285 PF00117 Glutamine amidotransferase class-I N4267_10290 PF00571 CBS domain N4267_10290 PF00478 IMP dehydrogenase / GMP reductase domain N4267_10295 PF02601 Exonuclease VII, large subunit N4267_10295 PF13742 OB-fold nucleic acid binding domain N4267_10310 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N4267_10310 PF01926 50S ribosome-binding GTPase N4267_10315 PF13360 PQQ-like domain N4267_10320 PF09976 Tetratricopeptide repeat-like domain N4267_10325 PF13393 Histidyl-tRNA synthetase N4267_10325 PF03129 Anticodon binding domain N4267_10330 PF04551 GcpE protein N4267_10335 PF13464 Domain of unknown function (DUF4115) N4267_10340 PF04055 Radical SAM superfamily N4267_10345 PF00334 Nucleoside diphosphate kinase N4267_10350 PF12404 Peptidase N4267_10350 PF00883 Cytosol aminopeptidase family, catalytic domain N4267_10355 PF04384 Iron-sulphur cluster assembly N4267_10360 PF00111 2Fe-2S iron-sulfur cluster binding domain N4267_10365 PF00012 Hsp70 protein N4267_10370 PF07743 HSCB C-terminal oligomerisation domain N4267_10370 PF00226 DnaJ domain N4267_10375 PF01521 Iron-sulphur cluster biosynthesis N4267_10380 PF01592 NifU-like N terminal domain N4267_10385 PF00266 Aminotransferase class-V N4267_10390 PF02082 Transcriptional regulator N4267_10395 PF00588 SpoU rRNA Methylase family N4267_10400 PF00459 Inositol monophosphatase family N4267_10405 PF02355 Protein export membrane protein N4267_10405 PF07549 SecD/SecF GG Motif N4267_10410 PF07549 SecD/SecF GG Motif N4267_10410 PF02355 Protein export membrane protein N4267_10410 PF13721 SecD export protein N-terminal TM region N4267_10415 PF02699 Preprotein translocase subunit N4267_10420 PF01702 Queuine tRNA-ribosyltransferase N4267_10425 PF02547 Queuosine biosynthesis protein N4267_10430 PF00571 CBS domain N4267_10435 PF00463 Isocitrate lyase family N4267_10440 PF01274 Malate synthase N4267_10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_10445 PF03466 LysR substrate binding domain N4267_10450 PF10417 C-terminal domain of 1-Cys peroxiredoxin N4267_10450 PF00578 AhpC/TSA family N4267_10455 PF03932 CutC family N4267_10460 PF03976 Polyphosphate kinase 2 (PPK2) N4267_10465 PF01895 PhoU domain N4267_10470 PF00005 ABC transporter N4267_10475 PF00528 Binding-protein-dependent transport system inner membrane component N4267_10480 PF00528 Binding-protein-dependent transport system inner membrane component N4267_10485 PF17941 Polyphosphate kinase C-terminal domain 1 N4267_10485 PF13089 Polyphosphate kinase N-terminal domain N4267_10485 PF02503 Polyphosphate kinase middle domain N4267_10485 PF13090 Polyphosphate kinase C-terminal domain 2 N4267_10490 PF02541 Ppx/GppA phosphatase family N4267_10495 PF12849 PBP superfamily domain N4267_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_10500 PF00512 His Kinase A (phospho-acceptor) domain N4267_10500 PF00989 PAS fold N4267_10500 PF11808 Phosphate regulon sensor protein PhoR N4267_10505 PF00072 Response regulator receiver domain N4267_10505 PF00486 Transcriptional regulatory protein, C terminal N4267_10510 PF04381 Putative exonuclease, RdgC N4267_10515 PF16325 Peptidase family U32 C-terminal domain N4267_10515 PF01136 Peptidase family U32 N4267_10520 PF00037 4Fe-4S binding domain N4267_10525 PF00881 Nitroreductase family N4267_10565 PF00004 ATPase family associated with various cellular activities (AAA) N4267_10565 PF07724 AAA domain (Cdc48 subfamily) N4267_10565 PF17871 AAA lid domain N4267_10565 PF02861 Clp amino terminal domain, pathogenicity island component N4267_10565 PF10431 C-terminal, D2-small domain, of ClpB protein N4267_10570 PF02578 Multi-copper polyphenol oxidoreductase laccase N4267_10575 PF00849 RNA pseudouridylate synthase N4267_10575 PF01479 S4 domain N4267_10580 PF13525 Outer membrane lipoprotein N4267_10585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N4267_10590 PF01817 Chorismate mutase type II N4267_10590 PF00800 Prephenate dehydratase N4267_10595 PF13416 Bacterial extracellular solute-binding protein N4267_10600 PF00990 Diguanylate cyclase, GGDEF domain N4267_10600 PF00563 EAL domain N4267_10605 PF01931 Protein of unknown function DUF84 N4267_10610 PF01371 Trp repressor protein N4267_10615 PF01464 Transglycosylase SLT domain N4267_10615 PF14718 Soluble lytic murein transglycosylase L domain N4267_10620 PF00005 ABC transporter N4267_10620 PF12848 ABC transporter N4267_10625 PF07238 PilZ domain N4267_10630 PF01817 Chorismate mutase type II N4267_10630 PF02153 Prephenate dehydrogenase N4267_10635 PF00793 DAHP synthetase I family N4267_10640 PF06580 Histidine kinase N4267_10640 PF07694 5TMR of 5TMR-LYT N4267_10645 PF04397 LytTr DNA-binding domain N4267_10645 PF00072 Response regulator receiver domain N4267_10650 PF00933 Glycosyl hydrolase family 3 N terminal domain N4267_10655 PF03702 Anhydro-N-acetylmuramic acid kinase N4267_10660 PF13580 SIS domain N4267_10670 PF02554 Carbon starvation protein CstA N4267_10675 PF02401 LytB protein N4267_10680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4267_10685 PF01252 Signal peptidase (SPase) II N4267_10690 PF08264 Anticodon-binding domain of tRNA N4267_10690 PF00133 tRNA synthetases class I (I, L, M and V) N4267_10690 PF06827 Zinc finger found in FPG and IleRS N4267_10695 PF06574 FAD synthetase N4267_10695 PF01687 Riboflavin kinase N4267_10700 PF03023 Lipid II flippase MurJ N4267_10705 PF01649 Ribosomal protein S20 N4267_10710 PF01022 Bacterial regulatory protein, arsR family N4267_10715 PF03466 LysR substrate binding domain N4267_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_10720 PF02690 Na+/Pi-cotransporter N4267_10725 PF00303 Thymidylate synthase N4267_10730 PF01790 Prolipoprotein diacylglyceryl transferase N4267_10735 PF01925 Sulfite exporter TauE/SafE N4267_10740 PF05524 PEP-utilising enzyme, N-terminal N4267_10740 PF01590 GAF domain N4267_10740 PF02896 PEP-utilising enzyme, TIM barrel domain N4267_10740 PF00391 PEP-utilising enzyme, mobile domain N4267_10745 PF00293 NUDIX domain N4267_10750 PF02976 DNA mismatch repair enzyme MutH N4267_10755 PF00248 Aldo/keto reductase family N4267_10765 PF02954 Bacterial regulatory protein, Fis family N4267_10765 PF00072 Response regulator receiver domain N4267_10765 PF00158 Sigma-54 interaction domain N4267_10770 PF01336 OB-fold nucleic acid binding domain N4267_10770 PF00152 tRNA synthetases class II (D, K and N) N4267_10780 PF05525 Branched-chain amino acid transport protein N4267_10785 PF05175 Methyltransferase small domain N4267_10790 PF00270 DEAD/DEAH box helicase N4267_10790 PF00271 Helicase conserved C-terminal domain N4267_10795 PF00009 Elongation factor Tu GTP binding domain N4267_10795 PF03144 Elongation factor Tu domain 2 N4267_10795 PF16658 Class II release factor RF3, C-terminal domain N4267_10800 PF03707 Bacterial signalling protein N terminal repeat N4267_10800 PF00990 Diguanylate cyclase, GGDEF domain N4267_10800 PF00563 EAL domain N4267_10815 PF13508 Acetyltransferase (GNAT) domain N4267_10820 PF02036 SCP-2 sterol transfer family N4267_10825 PF00563 EAL domain N4267_10825 PF00990 Diguanylate cyclase, GGDEF domain N4267_10825 PF03707 Bacterial signalling protein N terminal repeat N4267_10830 PF01136 Peptidase family U32 N4267_10835 PF01136 Peptidase family U32 N4267_10850 PF07719 Tetratricopeptide repeat N4267_10850 PF13181 Tetratricopeptide repeat N4267_10855 PF00575 S1 RNA binding domain N4267_10855 PF03725 3' exoribonuclease family, domain 2 N4267_10855 PF01138 3' exoribonuclease family, domain 1 N4267_10855 PF00013 KH domain N4267_10855 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N4267_10860 PF00312 Ribosomal protein S15 N4267_10865 PF09157 Pseudouridine synthase II TruB, C-terminal N4267_10865 PF01509 TruB family pseudouridylate synthase (N terminal domain) N4267_10865 PF16198 tRNA pseudouridylate synthase B C-terminal domain N4267_10870 PF02033 Ribosome-binding factor A N4267_10875 PF04760 Translation initiation factor IF-2, N-terminal region N4267_10875 PF08364 Bacterial translation initiation factor IF-2 associated region N4267_10875 PF11987 Translation-initiation factor 2 N4267_10875 PF00009 Elongation factor Tu GTP binding domain N4267_10880 PF13184 NusA-like KH domain N4267_10880 PF00575 S1 RNA binding domain N4267_10880 PF08529 NusA N-terminal domain N4267_10885 PF02576 RimP N-terminal domain N4267_10885 PF17384 RimP C-terminal SH3 domain N4267_10900 PF03840 Preprotein translocase SecG subunit N4267_10905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4267_10905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4267_10905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4267_10905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4267_10910 PF00809 Pterin binding enzyme N4267_10915 PF17862 AAA+ lid domain N4267_10915 PF00004 ATPase family associated with various cellular activities (AAA) N4267_10915 PF06480 FtsH Extracellular N4267_10915 PF01434 Peptidase family M41 N4267_10920 PF01728 FtsJ-like methyltransferase N4267_10925 PF01985 CRS1 / YhbY (CRM) domain N4267_10930 PF03449 Transcription elongation factor, N-terminal N4267_10930 PF01272 Transcription elongation factor, GreA/GreB, C-term N4267_10935 PF13609 Gram-negative porin N4267_10940 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family N4267_10945 PF01479 S4 domain N4267_10945 PF00579 tRNA synthetases class I (W and Y) N4267_10950 PF04225 Opacity-associated protein A LysM-like domain N4267_10950 PF01551 Peptidase family M23 N4267_10955 PF00873 AcrB/AcrD/AcrF family N4267_10965 PF01521 Iron-sulphur cluster biosynthesis N4267_10970 PF00202 Aminotransferase class-III N4267_10975 PF01594 AI-2E family transporter N4267_10980 PF08468 Methyltransferase small domain N-terminal N4267_10980 PF05175 Methyltransferase small domain N4267_10985 PF00072 Response regulator receiver domain N4267_10985 PF09308 LuxQ, periplasmic N4267_10985 PF00512 His Kinase A (phospho-acceptor) domain N4267_10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_10990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4267_10995 PF00528 Binding-protein-dependent transport system inner membrane component N4267_11000 PF00528 Binding-protein-dependent transport system inner membrane component N4267_11000 PF12911 N-terminal TM domain of oligopeptide transport permease C N4267_11005 PF00005 ABC transporter N4267_11005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_11010 PF00005 ABC transporter N4267_11010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_11020 PF01869 BadF/BadG/BcrA/BcrD ATPase family N4267_11025 PF02838 Glycosyl hydrolase family 20, domain 2 N4267_11025 PF00728 Glycosyl hydrolase family 20, catalytic domain N4267_11030 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain N4267_11030 PF06165 Glycosyltransferase family 36 N4267_11035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4267_11035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4267_11035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4267_11035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4267_11040 PF00005 ABC transporter N4267_11040 PF08402 TOBE domain N4267_11050 PF13416 Bacterial extracellular solute-binding protein N4267_11055 PF00909 Ammonium Transporter Family N4267_11060 PF00543 Nitrogen regulatory protein P-II N4267_11065 PF06062 Uncharacterised protein family (UPF0231) N4267_11070 PF11791 Aconitate B N-terminal domain N4267_11070 PF00330 Aconitase family (aconitate hydratase) N4267_11070 PF06434 Aconitate hydratase 2 N-terminus N4267_11075 PF01734 Patatin-like phospholipase N4267_11080 PF00912 Transglycosylase N4267_11080 PF00905 Penicillin binding protein transpeptidase domain N4267_11080 PF14814 Bifunctional transglycosylase second domain N4267_11085 PF00270 DEAD/DEAH box helicase N4267_11085 PF04408 Helicase associated domain (HA2) N4267_11085 PF00271 Helicase conserved C-terminal domain N4267_11085 PF08482 ATP-dependent helicase C-terminal N4267_11095 PF03749 Sugar fermentation stimulation protein RE domain N4267_11095 PF17746 SfsA N-terminal OB domain N4267_11100 PF01258 Prokaryotic dksA/traR C4-type zinc finger N4267_11105 PF00749 tRNA synthetases class I (E and Q), catalytic domain N4267_11110 PF12627 Probable RNA and SrmB- binding site of polymerase A N4267_11110 PF12626 Polymerase A arginine-rich C-terminus N4267_11110 PF01743 Poly A polymerase head domain N4267_11115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N4267_11120 PF02548 Ketopantoate hydroxymethyltransferase N4267_11125 PF02569 Pantoate-beta-alanine ligase N4267_11130 PF01061 ABC-2 type transporter N4267_11135 PF00005 ABC transporter N4267_11140 PF01740 STAS domain N4267_11140 PF00916 Sulfate permease family N4267_11145 PF00484 Carbonic anhydrase N4267_11150 PF00156 Phosphoribosyl transferase domain N4267_11155 PF00440 Bacterial regulatory proteins, tetR family N4267_11160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N4267_11165 PF04348 LppC putative lipoprotein N4267_11170 PF02021 Uncharacterised protein family UPF0102 N4267_11175 PF13580 SIS domain N4267_11180 PF04972 BON domain N4267_11185 PF04386 Stringent starvation protein B N4267_11190 PF00043 Glutathione S-transferase, C-terminal domain N4267_11190 PF02798 Glutathione S-transferase, N-terminal domain N4267_11195 PF02167 Cytochrome C1 family N4267_11200 PF00032 Cytochrome b(C-terminal)/b6/petD N4267_11200 PF00033 Cytochrome b/b6/petB N4267_11205 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal N4267_11205 PF00355 Rieske [2Fe-2S] domain N4267_11210 PF00380 Ribosomal protein S9/S16 N4267_11215 PF00572 Ribosomal protein L13 N4267_11220 PF03969 AFG1-like ATPase N4267_11230 PF00595 PDZ domain N4267_11235 PF13180 PDZ domain N4267_11240 PF01245 Ribosomal protein L19 N4267_11245 PF01746 tRNA (Guanine-1)-methyltransferase N4267_11250 PF05239 PRC-barrel domain N4267_11250 PF01782 RimM N-terminal domain N4267_11255 PF00886 Ribosomal protein S16 N4267_11260 PF00448 SRP54-type protein, GTPase domain N4267_11260 PF02881 SRP54-type protein, helical bundle domain N4267_11260 PF02978 Signal peptide binding domain N4267_11265 PF01578 Cytochrome C assembly protein N4267_11270 PF01595 Cyclin M transmembrane N-terminal domain N4267_11270 PF03471 Transporter associated domain N4267_11270 PF00571 CBS domain N4267_11275 PF02664 S-Ribosylhomocysteinase (LuxS) N4267_11280 PF04262 Glutamate-cysteine ligase N4267_11285 PF00675 Insulinase (Peptidase family M16) N4267_11285 PF05193 Peptidase M16 inactive domain N4267_11290 PF09335 SNARE associated Golgi protein N4267_11295 PF08240 Alcohol dehydrogenase GroES-like domain N4267_11295 PF00107 Zinc-binding dehydrogenase N4267_11300 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N4267_11305 PF00682 HMGL-like N4267_11305 PF02436 Conserved carboxylase domain N4267_11305 PF00364 Biotin-requiring enzyme N4267_11310 PF04277 Oxaloacetate decarboxylase, gamma chain N4267_11350 PF02599 Global regulator protein family N4267_11355 PF00696 Amino acid kinase family N4267_11355 PF01842 ACT domain N4267_11355 PF13840 ACT domain N4267_11360 PF02272 DHHA1 domain N4267_11360 PF01411 tRNA synthetases class II (A) N4267_11360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N4267_11365 PF02631 RecX family N4267_11370 PF00154 recA bacterial DNA recombination protein N4267_11375 PF02464 Competence-damaged protein N4267_11380 PF00005 ABC transporter N4267_11380 PF12857 TOBE-like domain N4267_11385 PF00528 Binding-protein-dependent transport system inner membrane component N4267_11390 PF00528 Binding-protein-dependent transport system inner membrane component N4267_11400 PF00291 Pyridoxal-phosphate dependent enzyme N4267_11405 PF01624 MutS domain I N4267_11405 PF05188 MutS domain II N4267_11405 PF05192 MutS domain III N4267_11405 PF05190 MutS family domain IV N4267_11405 PF00488 MutS domain V N4267_11410 PF04545 Sigma-70, region 4 N4267_11410 PF04539 Sigma-70 region 3 N4267_11410 PF00140 Sigma-70 factor, region 1.2 N4267_11410 PF04542 Sigma-70 region 2 N4267_11415 PF01476 LysM domain N4267_11415 PF01551 Peptidase family M23 N4267_11425 PF01975 Survival protein SurE N4267_11430 PF01142 tRNA pseudouridine synthase D (TruD) N4267_11435 PF02542 YgbB family N4267_11440 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N4267_11445 PF04977 Septum formation initiator N4267_11450 PF02673 Bacitracin resistance protein BacA N4267_11455 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N4267_11460 PF02152 Dihydroneopterin aldolase N4267_11465 PF02660 Glycerol-3-phosphate acyltransferase N4267_11470 PF00561 alpha/beta hydrolase fold N4267_11475 PF00814 Glycoprotease family N4267_11480 PF01165 Ribosomal protein S21 N4267_11485 PF09424 Yqey-like protein N4267_11490 PF01807 CHC2 zinc finger N4267_11490 PF08275 DNA primase catalytic core, N-terminal domain N4267_11490 PF08278 DNA primase DnaG DnaB-binding N4267_11490 PF10410 DnaB-helicase binding domain of primase N4267_11495 PF04546 Sigma-70, non-essential region N4267_11495 PF03979 Sigma-70 factor, region 1.1 N4267_11495 PF00140 Sigma-70 factor, region 1.2 N4267_11495 PF04542 Sigma-70 region 2 N4267_11495 PF04539 Sigma-70 region 3 N4267_11495 PF04545 Sigma-70, region 4 N4267_11510 PF03480 Bacterial extracellular solute-binding protein, family 7 N4267_11515 PF01380 SIS domain N4267_11520 PF08220 DeoR-like helix-turn-helix domain N4267_11520 PF00455 DeoR C terminal sensor domain N4267_11525 PF00224 Pyruvate kinase, barrel domain N4267_11525 PF02887 Pyruvate kinase, alpha/beta domain N4267_11535 PF04402 Protein of unknown function (DUF541) N4267_11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_11540 PF03466 LysR substrate binding domain N4267_11545 PF01810 LysE type translocator N4267_11550 PF00924 Mechanosensitive ion channel N4267_11550 PF05552 Conserved TM helix N4267_11555 PF01116 Fructose-bisphosphate aldolase class-II N4267_11560 PF00162 Phosphoglycerate kinase N4267_11565 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4267_11565 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4267_11570 PF07715 TonB-dependent Receptor Plug Domain N4267_11570 PF00593 TonB dependent receptor N4267_11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_11575 PF03466 LysR substrate binding domain N4267_11580 PF00456 Transketolase, thiamine diphosphate binding domain N4267_11580 PF02780 Transketolase, C-terminal domain N4267_11580 PF02779 Transketolase, pyrimidine binding domain N4267_11585 PF02773 S-adenosylmethionine synthetase, C-terminal domain N4267_11585 PF02772 S-adenosylmethionine synthetase, central domain N4267_11585 PF00438 S-adenosylmethionine synthetase, N-terminal domain N4267_11590 PF10263 SprT-like family N4267_11590 PF17283 SprT-like zinc ribbon domain N4267_11595 PF04231 Endonuclease I N4267_11600 PF04452 RNA methyltransferase N4267_11605 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N4267_11605 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N4267_11610 PF02622 Uncharacterized ACR, COG1678 N4267_11615 PF03652 Holliday junction resolvase N4267_11620 PF00579 tRNA synthetases class I (W and Y) N4267_11620 PF01479 S4 domain N4267_11630 PF00437 Type II/IV secretion system protein N4267_11635 PF00437 Type II/IV secretion system protein N4267_11640 PF01168 Alanine racemase, N-terminal domain N4267_11645 PF14748 Pyrroline-5-carboxylate reductase dimerisation N4267_11645 PF03807 NADP oxidoreductase coenzyme F420-dependent N4267_11650 PF02325 YGGT family N4267_11655 PF02594 Uncharacterised ACR, YggU family COG1872 N4267_11665 PF01725 Ham1 family N4267_11670 PF06969 HemN C-terminal domain N4267_11670 PF04055 Radical SAM superfamily N4267_11675 PF04960 Glutaminase N4267_11680 PF02390 Putative methyltransferase N4267_11685 PF10576 Iron-sulfur binding domain of endonuclease III N4267_11685 PF00633 Helix-hairpin-helix motif N4267_11685 PF00730 HhH-GPD superfamily base excision DNA repair protein N4267_11685 PF14815 NUDIX domain N4267_11690 PF04362 Bacterial Fe(2+) trafficking N4267_11695 PF01464 Transglycosylase SLT domain N4267_11695 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain N4267_11720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_11720 PF12729 Four helix bundle sensory module for signal transduction N4267_11720 PF00672 HAMP domain N4267_11750 PF00226 DnaJ domain N4267_11750 PF05099 Tellurite resistance protein TerB N4267_11755 PF04453 LPS transport system D N4267_11755 PF03968 OstA-like protein N4267_11760 PF09312 SurA N-terminal domain N4267_11765 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N4267_11770 PF00398 Ribosomal RNA adenine dimethylase N4267_11775 PF04379 ApaG domain N4267_11780 PF00149 Calcineurin-like phosphoesterase N4267_11785 PF00186 Dihydrofolate reductase N4267_11790 PF12821 Threonine/Serine exporter, ThrE N4267_11795 PF06738 Putative threonine/serine exporter N4267_11800 PF01926 50S ribosome-binding GTPase N4267_11800 PF01018 GTP1/OBG N4267_11805 PF01016 Ribosomal L27 protein N4267_11810 PF00829 Ribosomal prokaryotic L21 protein N4267_11815 PF00348 Polyprenyl synthetase N4267_11820 PF13520 Amino acid permease N4267_11825 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N4267_11825 PF00056 lactate/malate dehydrogenase, NAD binding domain N4267_11830 PF02863 Arginine repressor, C-terminal domain N4267_11830 PF01316 Arginine repressor, DNA binding domain N4267_11835 PF16868 NMT1-like family N4267_11845 PF00582 Universal stress protein family N4267_11860 PF06877 Regulator of ribonuclease activity B N4267_11870 PF01523 Putative modulator of DNA gyrase N4267_11875 PF00795 Carbon-nitrogen hydrolase N4267_11880 PF13502 AsmA-like C-terminal region N4267_11880 PF13116 Protein of unknown function N4267_11885 PF00575 S1 RNA binding domain N4267_11885 PF10150 Ribonuclease E/G family N4267_11890 PF02545 Maf-like protein N4267_11895 PF04093 rod shape-determining protein MreD N4267_11900 PF04085 rod shape-determining protein MreC N4267_11935 PF07963 Prokaryotic N-terminal methylation motif N4267_11940 PF07963 Prokaryotic N-terminal methylation motif N4267_11950 PF00482 Type II secretion system (T2SS), protein F N4267_11955 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N4267_11955 PF00437 Type II/IV secretion system protein N4267_11965 PF01471 Putative peptidoglycan binding domain N4267_11965 PF13401 AAA domain N4267_11970 PF00263 Bacterial type II and III secretion system protein N4267_11970 PF03958 Bacterial type II/III secretion system short domain N4267_11990 PF00563 EAL domain N4267_11990 PF17157 Gammaproteobacterial periplasmic sensor domain N4267_11990 PF00990 Diguanylate cyclase, GGDEF domain N4267_11995 PF00436 Single-strand binding protein family N4267_12000 PF00196 Bacterial regulatory proteins, luxR family N4267_12005 PF00483 Nucleotidyl transferase N4267_12010 PF00005 ABC transporter N4267_12010 PF17755 UvrA DNA-binding domain N4267_12010 PF17760 UvrA interaction domain N4267_12020 PF00266 Aminotransferase class-V N4267_12025 PF00696 Amino acid kinase family N4267_12025 PF01842 ACT domain N4267_12030 PF00809 Pterin binding enzyme N4267_12030 PF02574 Homocysteine S-methyltransferase N4267_12030 PF02310 B12 binding domain N4267_12030 PF02965 Vitamin B12 dependent methionine synthase, activation domain N4267_12030 PF02607 B12 binding domain N4267_12035 PF00999 Sodium/hydrogen exchanger family N4267_12105 PF01507 Phosphoadenosine phosphosulfate reductase family N4267_12110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N4267_12110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N4267_12115 PF00667 FAD binding domain N4267_12115 PF00258 Flavodoxin N4267_12115 PF00175 Oxidoreductase NAD-binding domain N4267_12135 PF09583 Phage shock protein G (Phageshock_PspG) N4267_12140 PF01207 Dihydrouridine synthase (Dus) N4267_12145 PF01475 Ferric uptake regulator family N4267_12155 PF12706 Beta-lactamase superfamily domain N4267_12160 PF00342 Phosphoglucose isomerase N4267_12165 PF01894 Uncharacterised protein family UPF0047 N4267_12170 PF00842 Alanine racemase, C-terminal domain N4267_12170 PF01168 Alanine racemase, N-terminal domain N4267_12175 PF00772 DnaB-like helicase N terminal domain N4267_12175 PF03796 DnaB-like helicase C terminal domain N4267_12185 PF03948 Ribosomal protein L9, C-terminal domain N4267_12185 PF01281 Ribosomal protein L9, N-terminal domain N4267_12190 PF01084 Ribosomal protein S18 N4267_12195 PF00436 Single-strand binding protein family N4267_12200 PF01250 Ribosomal protein S6 N4267_12205 PF00210 Ferritin-like domain N4267_12210 PF04324 BFD-like [2Fe-2S] binding domain N4267_12215 PF00009 Elongation factor Tu GTP binding domain N4267_12215 PF03144 Elongation factor Tu domain 2 N4267_12215 PF03143 Elongation factor Tu C-terminal domain N4267_12220 PF00679 Elongation factor G C-terminus N4267_12220 PF14492 Elongation Factor G, domain II N4267_12220 PF03764 Elongation factor G, domain IV N4267_12220 PF00009 Elongation factor Tu GTP binding domain N4267_12220 PF03144 Elongation factor Tu domain 2 N4267_12225 PF00177 Ribosomal protein S7p/S5e N4267_12230 PF00164 Ribosomal protein S12/S23 N4267_12240 PF02635 DsrE/DsrF-like family N4267_12245 PF02635 DsrE/DsrF-like family N4267_12250 PF13309 HTH domain N4267_12250 PF08348 YheO-like PAS domain N4267_12255 PF01797 Transposase IS200 like N4267_12260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4267_12260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4267_12270 PF04102 SlyX N4267_12275 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) N4267_12280 PF01145 SPFH domain / Band 7 family N4267_12285 PF01145 SPFH domain / Band 7 family N4267_12285 PF12221 Bacterial membrane protein N terminal N4267_12290 PF16360 GTP-binding GTPase Middle Region N4267_12290 PF13167 GTP-binding GTPase N-terminal N4267_12290 PF01926 50S ribosome-binding GTPase N4267_12295 PF17209 Hfq protein N4267_12305 PF08676 MutL C terminal dimerisation domain N4267_12305 PF01119 DNA mismatch repair protein, C-terminal domain N4267_12310 PF01520 N-acetylmuramoyl-L-alanine amidase N4267_12315 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N4267_12320 PF08331 Domain of unknown function (DUF1730) N4267_12370 PF00929 Exonuclease N4267_12375 PF03193 RsgA GTPase N4267_12380 PF02666 Phosphatidylserine decarboxylase N4267_12385 PF00939 Sodium:sulfate symporter transmembrane region N4267_12395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N4267_12395 PF01676 Metalloenzyme superfamily N4267_12400 PF01551 Peptidase family M23 N4267_12410 PF08360 QacR-like protein, C-terminal region N4267_12410 PF00440 Bacterial regulatory proteins, tetR family N4267_12415 PF01208 Uroporphyrinogen decarboxylase (URO-D) N4267_12420 PF09297 NADH pyrophosphatase zinc ribbon domain N4267_12420 PF00293 NUDIX domain N4267_12425 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ N4267_12430 PF04997 RNA polymerase Rpb1, domain 1 N4267_12430 PF00623 RNA polymerase Rpb1, domain 2 N4267_12430 PF04983 RNA polymerase Rpb1, domain 3 N4267_12430 PF05000 RNA polymerase Rpb1, domain 4 N4267_12430 PF04998 RNA polymerase Rpb1, domain 5 N4267_12435 PF04560 RNA polymerase Rpb2, domain 7 N4267_12435 PF10385 RNA polymerase beta subunit external 1 domain N4267_12435 PF00562 RNA polymerase Rpb2, domain 6 N4267_12435 PF04561 RNA polymerase Rpb2, domain 2 N4267_12435 PF04563 RNA polymerase beta subunit N4267_12435 PF04565 RNA polymerase Rpb2, domain 3 N4267_12440 PF00542 Ribosomal protein L7/L12 C-terminal domain N4267_12440 PF16320 Ribosomal protein L7/L12 dimerisation domain N4267_12445 PF00466 Ribosomal protein L10 N4267_12450 PF00687 Ribosomal protein L1p/L10e family N4267_12455 PF00298 Ribosomal protein L11, RNA binding domain N4267_12455 PF03946 Ribosomal protein L11, N-terminal domain N4267_12460 PF00467 KOW motif N4267_12460 PF02357 Transcription termination factor nusG N4267_12465 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N4267_12470 PF00009 Elongation factor Tu GTP binding domain N4267_12470 PF03143 Elongation factor Tu C-terminal domain N4267_12470 PF03144 Elongation factor Tu domain 2 N4267_12495 PF00485 Phosphoribulokinase / Uridine kinase family N4267_12500 PF02237 Biotin protein ligase C terminal domain N4267_12500 PF03099 Biotin/lipoate A/B protein ligase family N4267_12500 PF08279 HTH domain N4267_12505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N4267_12505 PF01565 FAD binding domain N4267_12515 PF13091 PLD-like domain N4267_12550 PF00175 Oxidoreductase NAD-binding domain N4267_12555 PF00175 Oxidoreductase NAD-binding domain N4267_12555 PF00970 Oxidoreductase FAD-binding domain N4267_12555 PF00111 2Fe-2S iron-sulfur cluster binding domain N4267_12560 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N4267_12570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4267_12570 PF07497 Rho termination factor, RNA-binding domain N4267_12570 PF07498 Rho termination factor, N-terminal domain N4267_12575 PF00085 Thioredoxin N4267_12580 PF00270 DEAD/DEAH box helicase N4267_12580 PF00271 Helicase conserved C-terminal domain N4267_12585 PF02541 Ppx/GppA phosphatase family N4267_12590 PF00072 Response regulator receiver domain N4267_12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_12590 PF00512 His Kinase A (phospho-acceptor) domain N4267_12590 PF09456 RcsC Alpha-Beta-Loop (ABL) N4267_12595 PF12832 MFS_1 like family N4267_12610 PF00501 AMP-binding enzyme N4267_12610 PF13193 AMP-binding enzyme C-terminal domain N4267_12610 PF16177 Acetyl-coenzyme A synthetase N-terminus N4267_12615 PF01220 Dehydroquinase class II N4267_12620 PF00364 Biotin-requiring enzyme N4267_12625 PF02785 Biotin carboxylase C-terminal domain N4267_12625 PF00289 Biotin carboxylase, N-terminal domain N4267_12625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N4267_12635 PF01207 Dihydrouridine synthase (Dus) N4267_12640 PF02954 Bacterial regulatory protein, Fis family N4267_12645 PF02661 Fic/DOC family N4267_12645 PF13784 Fic/DOC family N-terminal N4267_12650 PF00356 Bacterial regulatory proteins, lacI family N4267_12650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N4267_12655 PF11647 Membrane Localization Domain N4267_12660 PF01699 Sodium/calcium exchanger protein N4267_12665 PF00920 Dehydratase family N4267_12670 PF01202 Shikimate kinase N4267_12675 PF02447 GntP family permease N4267_12680 PF01081 KDPG and KHG aldolase N4267_12685 PF07715 TonB-dependent Receptor Plug Domain N4267_12685 PF00593 TonB dependent receptor N4267_12700 PF17200 Single Cache domain 2 N4267_12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_12700 PF00672 HAMP domain N4267_12705 PF01276 Orn/Lys/Arg decarboxylase, major domain N4267_12705 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N4267_12705 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N4267_12710 PF13520 Amino acid permease N4267_12715 PF18500 CadC C-terminal domain 1 N4267_12715 PF00486 Transcriptional regulatory protein, C terminal N4267_12720 PF13411 MerR HTH family regulatory protein N4267_12730 PF01808 AICARFT/IMPCHase bienzyme N4267_12730 PF02142 MGS-like domain N4267_12735 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N4267_12735 PF02843 Phosphoribosylglycinamide synthetase, C domain N4267_12735 PF02844 Phosphoribosylglycinamide synthetase, N domain N4267_12745 PF00216 Bacterial DNA-binding protein N4267_12750 PF01595 Cyclin M transmembrane N-terminal domain N4267_12750 PF00571 CBS domain N4267_12755 PF04222 Protein of unknown function (DUF416) N4267_12760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4267_12765 PF03167 Uracil DNA glycosylase superfamily N4267_12770 PF00924 Mechanosensitive ion channel N4267_12775 PF00753 Metallo-beta-lactamase superfamily N4267_12775 PF10996 Beta-Casp domain N4267_12775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain N4267_12780 PF02719 Polysaccharide biosynthesis protein N4267_12785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N4267_12795 PF02397 Bacterial sugar transferase N4267_12805 PF02350 UDP-N-acetylglucosamine 2-epimerase N4267_12825 PF00977 Histidine biosynthesis protein N4267_12830 PF00117 Glutamine amidotransferase class-I N4267_12855 PF02911 Formyl transferase, C-terminal domain N4267_12855 PF00551 Formyl transferase N4267_12860 PF13537 Glutamine amidotransferase domain N4267_12860 PF00733 Asparagine synthase N4267_12870 PF01757 Acyltransferase family N4267_12875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N4267_12880 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_12885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N4267_12885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4267_12885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4267_12890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N4267_12890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N4267_12895 PF02706 Chain length determinant protein N4267_12900 PF01370 NAD dependent epimerase/dehydratase family N4267_12905 PF00457 Glycosyl hydrolases family 11 N4267_12905 PF01522 Polysaccharide deacetylase N4267_12925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N4267_12930 PF04488 Glycosyltransferase sugar-binding region containing DXD motif N4267_12935 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N4267_12965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N4267_12970 PF00535 Glycosyl transferase family 2 N4267_12975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N4267_12980 PF01467 Cytidylyltransferase-like N4267_12985 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N4267_12985 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N4267_12985 PF06827 Zinc finger found in FPG and IleRS N4267_12995 PF00471 Ribosomal protein L33 N4267_13000 PF00830 Ribosomal L28 family N4267_13005 PF04002 RadC-like JAB domain N4267_13010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_13010 PF00672 HAMP domain N4267_13010 PF02743 Cache domain N4267_13015 PF04127 DNA / pantothenate metabolism flavoprotein N4267_13015 PF02441 Flavoprotein N4267_13025 PF00440 Bacterial regulatory proteins, tetR family N4267_13030 PF03279 Bacterial lipid A biosynthesis acyltransferase N4267_13035 PF03279 Bacterial lipid A biosynthesis acyltransferase N4267_13040 PF00156 Phosphoribosyl transferase domain N4267_13045 PF01138 3' exoribonuclease family, domain 1 N4267_13045 PF03725 3' exoribonuclease family, domain 2 N4267_13050 PF03755 YicC-like family, N-terminal region N4267_13050 PF08340 Domain of unknown function (DUF1732) N4267_13055 PF03350 Uncharacterized protein family, UPF0114 N4267_13060 PF00267 Gram-negative porin N4267_13065 PF00367 phosphotransferase system, EIIB N4267_13065 PF02378 Phosphotransferase system, EIIC N4267_13070 PF13580 SIS domain N4267_13075 PF01418 Helix-turn-helix domain, rpiR family N4267_13075 PF01380 SIS domain N4267_13080 PF01032 FecCD transport family N4267_13085 PF01497 Periplasmic binding protein N4267_13090 PF00005 ABC transporter N4267_13095 PF07715 TonB-dependent Receptor Plug Domain N4267_13095 PF00593 TonB dependent receptor N4267_13100 PF00664 ABC transporter transmembrane region N4267_13100 PF00005 ABC transporter N4267_13115 PF09382 RQC domain N4267_13115 PF16124 RecQ zinc-binding N4267_13115 PF00270 DEAD/DEAH box helicase N4267_13115 PF00570 HRDC domain N4267_13115 PF00271 Helicase conserved C-terminal domain N4267_13120 PF00892 EamA-like transporter family N4267_13130 PF12833 Helix-turn-helix domain N4267_13135 PF01810 LysE type translocator N4267_13140 PF00580 UvrD/REP helicase N-terminal domain N4267_13140 PF13361 UvrD-like helicase C-terminal domain N4267_13145 PF01432 Peptidase family M3 N4267_13150 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N4267_13155 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_13155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4267_13180 PF00528 Binding-protein-dependent transport system inner membrane component N4267_13180 PF12911 N-terminal TM domain of oligopeptide transport permease C N4267_13185 PF00528 Binding-protein-dependent transport system inner membrane component N4267_13190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4267_13195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_13195 PF00005 ABC transporter N4267_13230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N4267_13235 PF00580 UvrD/REP helicase N-terminal domain N4267_13235 PF13361 UvrD-like helicase C-terminal domain N4267_13240 PF00440 Bacterial regulatory proteins, tetR family N4267_13245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4267_13250 PF00873 AcrB/AcrD/AcrF family N4267_13255 PF04380 Membrane fusogenic activity N4267_13260 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N4267_13260 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N4267_13265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_13265 PF03466 LysR substrate binding domain N4267_13335 PF12724 Flavodoxin domain N4267_13340 PF02386 Cation transport protein N4267_13345 PF01205 Uncharacterized protein family UPF0029 N4267_13345 PF09186 Domain of unknown function (DUF1949) N4267_13350 PF00378 Enoyl-CoA hydratase/isomerase N4267_13350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N4267_13350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N4267_13355 PF00108 Thiolase, N-terminal domain N4267_13355 PF02803 Thiolase, C-terminal domain N4267_13360 PF03466 LysR substrate binding domain N4267_13360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_13365 PF07690 Major Facilitator Superfamily N4267_13370 PF12804 MobA-like NTP transferase domain N4267_13370 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_13375 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain N4267_13375 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N4267_13380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4267_13380 PF02874 ATP synthase alpha/beta family, beta-barrel domain N4267_13385 PF00231 ATP synthase N4267_13390 PF00306 ATP synthase alpha/beta chain, C terminal domain N4267_13390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N4267_13390 PF02874 ATP synthase alpha/beta family, beta-barrel domain N4267_13395 PF00213 ATP synthase delta (OSCP) subunit N4267_13400 PF00430 ATP synthase B/B' CF(0) N4267_13405 PF00137 ATP synthase subunit C N4267_13410 PF00119 ATP synthase A chain N4267_13415 PF03899 ATP synthase I chain N4267_13420 PF17762 HTH domain found in ParB protein N4267_13420 PF02195 ParB-like nuclease domain N4267_13425 PF13614 AAA domain N4267_13430 PF02527 rRNA small subunit methyltransferase G N4267_13435 PF01134 Glucose inhibited division protein A N4267_13435 PF13932 GidA associated domain N4267_13440 PF00258 Flavodoxin N4267_13445 PF01926 50S ribosome-binding GTPase N4267_13445 PF10396 GTP-binding protein TrmE N-terminus N4267_13445 PF12631 MnmE helical domain N4267_13450 PF02096 60Kd inner membrane protein N4267_13450 PF14849 YidC periplasmic domain N4267_13455 PF01809 Putative membrane protein insertion efficiency factor N4267_13460 PF00825 Ribonuclease P N4267_13465 PF00468 Ribosomal protein L34 N4267_13470 PF00005 ABC transporter N4267_13475 PF00528 Binding-protein-dependent transport system inner membrane component N4267_13480 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_13490 PF03354 Phage Terminase N4267_13505 PF00717 Peptidase S24-like N4267_13505 PF01381 Helix-turn-helix N4267_13520 PF00589 Phage integrase family N4267_13520 PF12167 Arm DNA-binding domain N4267_13545 PF08240 Alcohol dehydrogenase GroES-like domain N4267_13545 PF00107 Zinc-binding dehydrogenase N4267_13550 PF00155 Aminotransferase class I and II N4267_13555 PF01053 Cys/Met metabolism PLP-dependent enzyme N4267_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_13560 PF03466 LysR substrate binding domain N4267_13565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4267_13590 PF01966 HD domain N4267_13595 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N4267_13595 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N4267_13600 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N4267_13605 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N4267_13605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4267_13630 PF02595 Glycerate kinase family N4267_13635 PF02447 GntP family permease N4267_13640 PF17853 GGDEF-like domain N4267_13640 PF05651 Putative sugar diacid recognition N4267_13640 PF13556 PucR C-terminal helix-turn-helix domain N4267_13645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_13645 PF00672 HAMP domain N4267_13650 PF01243 Pyridoxamine 5'-phosphate oxidase N4267_13655 PF06228 Haem utilisation ChuX/HutX N4267_13660 PF04055 Radical SAM superfamily N4267_13665 PF03544 Gram-negative bacterial TonB protein C-terminal N4267_13670 PF01618 MotA/TolQ/ExbB proton channel family N4267_13675 PF02472 Biopolymer transport protein ExbD/TolR N4267_13680 PF01497 Periplasmic binding protein N4267_13685 PF01032 FecCD transport family N4267_13690 PF00005 ABC transporter N4267_13720 PF00672 HAMP domain N4267_13720 PF02743 Cache domain N4267_13720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_13725 PF03476 MOSC N-terminal beta barrel domain N4267_13725 PF00111 2Fe-2S iron-sulfur cluster binding domain N4267_13725 PF03473 MOSC domain N4267_13725 PF03476 MOSC N-terminal beta barrel domain N4267_13725 PF00111 2Fe-2S iron-sulfur cluster binding domain N4267_13725 PF03473 MOSC domain N4267_13730 PF01979 Amidohydrolase family N4267_13735 PF05958 tRNA (Uracil-5-)-methyltransferase N4267_13740 PF05661 Protein of unknown function (DUF808) N4267_13745 PF17151 Periplasmic sensor domain N4267_13745 PF00990 Diguanylate cyclase, GGDEF domain N4267_13755 PF00313 'Cold-shock' DNA-binding domain N4267_13780 PF00990 Diguanylate cyclase, GGDEF domain N4267_13780 PF08448 PAS fold N4267_13785 PF00455 DeoR C terminal sensor domain N4267_13785 PF08220 DeoR-like helix-turn-helix domain N4267_13800 PF00528 Binding-protein-dependent transport system inner membrane component N4267_13805 PF00528 Binding-protein-dependent transport system inner membrane component N4267_13805 PF14785 Maltose transport system permease protein MalF P2 domain N4267_13810 PF01547 Bacterial extracellular solute-binding protein N4267_13815 PF00005 ABC transporter N4267_13815 PF08402 TOBE domain N4267_13820 PF13302 Acetyltransferase (GNAT) domain N4267_13835 PF01906 Putative heavy-metal-binding N4267_13840 PF00196 Bacterial regulatory proteins, luxR family N4267_13850 PF01584 CheW-like domain N4267_13850 PF00072 Response regulator receiver domain N4267_13855 PF01047 MarR family N4267_13860 PF00990 Diguanylate cyclase, GGDEF domain N4267_13875 PF03707 Bacterial signalling protein N terminal repeat N4267_13875 PF00563 EAL domain N4267_13875 PF00990 Diguanylate cyclase, GGDEF domain N4267_13895 PF03466 LysR substrate binding domain N4267_13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_13900 PF00563 EAL domain N4267_13900 PF00990 Diguanylate cyclase, GGDEF domain N4267_13910 PF02678 Pirin N4267_13910 PF05726 Pirin C-terminal cupin domain N4267_13915 PF06865 Pyrimidine/purine nucleoside phosphorylase N4267_13925 PF07690 Major Facilitator Superfamily N4267_13930 PF00672 HAMP domain N4267_13930 PF17200 Single Cache domain 2 N4267_13930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_13935 PF13654 AAA domain N4267_13935 PF05362 Lon protease (S16) C-terminal proteolytic domain N4267_13945 PF00005 ABC transporter N4267_13945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_13950 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_13955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_13955 PF08447 PAS fold N4267_13955 PF13426 PAS domain N4267_13970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_13970 PF03466 LysR substrate binding domain N4267_13980 PF02652 L-lactate permease N4267_13985 PF01070 FMN-dependent dehydrogenase N4267_13995 PF03618 Kinase/pyrophosphorylase N4267_14000 PF00391 PEP-utilising enzyme, mobile domain N4267_14000 PF02896 PEP-utilising enzyme, TIM barrel domain N4267_14000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain N4267_14005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_14005 PF08447 PAS fold N4267_14010 PF01554 MatE N4267_14025 PF03473 MOSC domain N4267_14025 PF03475 3-alpha domain N4267_14030 PF00271 Helicase conserved C-terminal domain N4267_14030 PF00270 DEAD/DEAH box helicase N4267_14035 PF03786 D-mannonate dehydratase (UxuA) N4267_14040 PF07729 FCD domain N4267_14040 PF00392 Bacterial regulatory proteins, gntR family N4267_14045 PF03480 Bacterial extracellular solute-binding protein, family 7 N4267_14050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N4267_14055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N4267_14060 PF01232 Mannitol dehydrogenase Rossmann domain N4267_14060 PF08125 Mannitol dehydrogenase C-terminal domain N4267_14065 PF02614 Glucuronate isomerase N4267_14070 PF00294 pfkB family carbohydrate kinase N4267_14075 PF01081 KDPG and KHG aldolase N4267_14080 PF10688 Bacterial inner membrane protein N4267_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_14085 PF03466 LysR substrate binding domain N4267_14095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4267_14105 PF00664 ABC transporter transmembrane region N4267_14105 PF00005 ABC transporter N4267_14115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N4267_14125 PF01810 LysE type translocator N4267_14130 PF12833 Helix-turn-helix domain N4267_14145 PF01557 Fumarylacetoacetate (FAA) hydrolase family N4267_14150 PF01047 MarR family N4267_14155 PF02566 OsmC-like protein N4267_14160 PF13609 Gram-negative porin N4267_14165 PF00892 EamA-like transporter family N4267_14170 PF00462 Glutaredoxin N4267_14175 PF07670 Nucleoside recognition N4267_14180 PF07670 Nucleoside recognition N4267_14185 PF03600 Citrate transporter N4267_14195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N4267_14195 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N4267_14210 PF07681 DoxX N4267_14215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_14215 PF03466 LysR substrate binding domain N4267_14235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N4267_14245 PF07148 Maltose operon periplasmic protein precursor (MalM) N4267_14250 PF02264 LamB porin N4267_14255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N4267_14255 PF00128 Alpha amylase, catalytic domain N4267_14265 PF12729 Four helix bundle sensory module for signal transduction N4267_14265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_14265 PF00672 HAMP domain N4267_14275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_14275 PF00672 HAMP domain N4267_14280 PF05230 MASE2 domain N4267_14280 PF00990 Diguanylate cyclase, GGDEF domain N4267_14290 PF00793 DAHP synthetase I family N4267_14295 PF00005 ABC transporter N4267_14300 PF00528 Binding-protein-dependent transport system inner membrane component N4267_14305 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_14310 PF00528 Binding-protein-dependent transport system inner membrane component N4267_14315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N4267_14315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N4267_14315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N4267_14315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N4267_14320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N4267_14320 PF02378 Phosphotransferase system, EIIC N4267_14320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N4267_14325 PF08125 Mannitol dehydrogenase C-terminal domain N4267_14325 PF01232 Mannitol dehydrogenase Rossmann domain N4267_14330 PF05068 Mannitol repressor N4267_14335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N4267_14365 PF13460 NAD(P)H-binding N4267_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_14370 PF03466 LysR substrate binding domain N4267_14375 PF02743 Cache domain N4267_14375 PF00672 HAMP domain N4267_14375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_14380 PF00106 short chain dehydrogenase N4267_14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_14385 PF03466 LysR substrate binding domain N4267_14390 PF04013 Putative SAM-dependent RNA methyltransferase N4267_14395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N4267_14405 PF13520 Amino acid permease N4267_14410 PF01276 Orn/Lys/Arg decarboxylase, major domain N4267_14410 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N4267_14410 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N4267_14415 PF10940 Protein of unknown function (DUF2618) N4267_14425 PF01037 Lrp/AsnC ligand binding domain N4267_14430 PF02743 Cache domain N4267_14430 PF00672 HAMP domain N4267_14430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_14440 PF00474 Sodium:solute symporter family N4267_14450 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N4267_14450 PF14850 DNA-binding domain of Proline dehydrogenase N4267_14450 PF00171 Aldehyde dehydrogenase family N4267_14450 PF01619 Proline dehydrogenase N4267_14455 PF12833 Helix-turn-helix domain N4267_14465 PF03781 Sulfatase-modifying factor enzyme 1 N4267_14470 PF00196 Bacterial regulatory proteins, luxR family N4267_14470 PF00072 Response regulator receiver domain N4267_14475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N4267_14475 PF01243 Pyridoxamine 5'-phosphate oxidase N4267_14480 PF00529 HlyD membrane-fusion protein of T1SS N4267_14495 PF03412 Peptidase C39 family N4267_14495 PF00664 ABC transporter transmembrane region N4267_14495 PF00005 ABC transporter N4267_14505 PF00072 Response regulator receiver domain N4267_14505 PF00990 Diguanylate cyclase, GGDEF domain N4267_14515 PF02743 Cache domain N4267_14515 PF00672 HAMP domain N4267_14515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_14520 PF01339 CheB methylesterase N4267_14520 PF00072 Response regulator receiver domain N4267_14525 PF03975 CheD chemotactic sensory transduction N4267_14530 PF03705 CheR methyltransferase, all-alpha domain N4267_14530 PF01739 CheR methyltransferase, SAM binding domain N4267_14535 PF02203 Tar ligand binding domain homologue N4267_14535 PF00672 HAMP domain N4267_14535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_14540 PF01584 CheW-like domain N4267_14545 PF01584 CheW-like domain N4267_14550 PF01584 CheW-like domain N4267_14550 PF09078 CheY binding N4267_14550 PF02895 Signal transducing histidine kinase, homodimeric domain N4267_14550 PF01627 Hpt domain N4267_14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_14555 PF00072 Response regulator receiver domain N4267_14570 PF00528 Binding-protein-dependent transport system inner membrane component N4267_14575 PF00528 Binding-protein-dependent transport system inner membrane component N4267_14575 PF12911 N-terminal TM domain of oligopeptide transport permease C N4267_14580 PF00005 ABC transporter N4267_14580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_14585 PF00884 Sulfatase N4267_14585 PF08019 Phosphoethanolamine transferase EptA/EptB N4267_14590 PF00512 His Kinase A (phospho-acceptor) domain N4267_14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_14590 PF08521 Two-component sensor kinase N-terminal N4267_14595 PF00072 Response regulator receiver domain N4267_14595 PF00486 Transcriptional regulatory protein, C terminal N4267_14605 PF00106 short chain dehydrogenase N4267_14615 PF00501 AMP-binding enzyme N4267_14625 PF05127 Helicase N4267_14625 PF13718 GNAT acetyltransferase 2 N4267_14630 PF13416 Bacterial extracellular solute-binding protein N4267_14635 PF02195 ParB-like nuclease domain N4267_14635 PF08775 ParB family N4267_14640 PF13614 AAA domain N4267_14640 PF18607 ParA helix turn helix domain N4267_14665 PF01709 Transcriptional regulator N4267_14670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N4267_14670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N4267_14675 PF00672 HAMP domain N4267_14675 PF17200 Single Cache domain 2 N4267_14675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_14680 PF10928 Protein of unknown function (DUF2810) N4267_14685 PF17874 MalT-like TPR region N4267_14685 PF00196 Bacterial regulatory proteins, luxR family N4267_14690 PF00343 Carbohydrate phosphorylase N4267_14695 PF02446 4-alpha-glucanotransferase N4267_14700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N4267_14700 PF02806 Alpha amylase, C-terminal all-beta domain N4267_14700 PF00128 Alpha amylase, catalytic domain N4267_14705 PF05638 Type VI secretion system effector, Hcp N4267_14710 PF04717 Type VI secretion system, phage-baseplate injector N4267_14715 PF13503 Domain of unknown function (DUF4123) N4267_14735 PF01757 Acyltransferase family N4267_14735 PF00842 Alanine racemase, C-terminal domain N4267_14735 PF01168 Alanine racemase, N-terminal domain N4267_14745 PF00939 Sodium:sulfate symporter transmembrane region N4267_14750 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N4267_14755 PF08329 Chitinase A, N-terminal domain N4267_14755 PF00704 Glycosyl hydrolases family 18 N4267_14780 PF01569 PAP2 superfamily N4267_14785 PF02225 PA domain N4267_14785 PF04389 Peptidase family M28 N4267_14790 PF00375 Sodium:dicarboxylate symporter family N4267_14800 PF02630 SCO1/SenC N4267_14815 PF03616 Sodium/glutamate symporter N4267_14820 PF07238 PilZ domain N4267_14820 PF12945 Flagellar protein YcgR N4267_14835 PF00529 HlyD membrane-fusion protein of T1SS N4267_14835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N4267_14840 PF11742 Protein of unknown function (DUF3302) N4267_14845 PF00990 Diguanylate cyclase, GGDEF domain N4267_14860 PF01048 Phosphorylase superfamily N4267_14865 PF08349 Protein of unknown function (DUF1722) N4267_14870 PF13411 MerR HTH family regulatory protein N4267_14875 PF00875 DNA photolyase N4267_14875 PF03441 FAD binding domain of DNA photolyase N4267_14880 PF17969 L,D-transpeptidase C-terminal domain N4267_14880 PF01476 LysM domain N4267_14880 PF03734 L,D-transpeptidase catalytic domain N4267_14890 PF00270 DEAD/DEAH box helicase N4267_14890 PF00271 Helicase conserved C-terminal domain N4267_14895 PF00326 Prolyl oligopeptidase family N4267_14895 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain N4267_14900 PF07715 TonB-dependent Receptor Plug Domain N4267_14900 PF00593 TonB dependent receptor N4267_14920 PF12849 PBP superfamily domain N4267_14925 PF00528 Binding-protein-dependent transport system inner membrane component N4267_14930 PF00528 Binding-protein-dependent transport system inner membrane component N4267_14935 PF00005 ABC transporter N4267_14940 PF00990 Diguanylate cyclase, GGDEF domain N4267_14940 PF00072 Response regulator receiver domain N4267_14950 PF07670 Nucleoside recognition N4267_14955 PF01740 STAS domain N4267_14955 PF00916 Sulfate permease family N4267_14965 PF01476 LysM domain N4267_14965 PF08525 Opacity-associated protein A N-terminal motif N4267_14965 PF01551 Peptidase family M23 N4267_14970 PF00990 Diguanylate cyclase, GGDEF domain N4267_14970 PF00563 EAL domain N4267_14970 PF03707 Bacterial signalling protein N terminal repeat N4267_14970 PF13188 PAS domain N4267_14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_14975 PF03466 LysR substrate binding domain N4267_14980 PF07690 Major Facilitator Superfamily N4267_14985 PF09278 MerR, DNA binding N4267_14985 PF00376 MerR family regulatory protein N4267_15005 PF00375 Sodium:dicarboxylate symporter family N4267_15020 PF02001 Protein of unknown function DUF134 N4267_15045 PF07504 Fungalysin/Thermolysin Propeptide Motif N4267_15045 PF01483 Proprotein convertase P-domain N4267_15045 PF01447 Thermolysin metallopeptidase, catalytic domain N4267_15045 PF02868 Thermolysin metallopeptidase, alpha-helical domain N4267_15055 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N4267_15055 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain N4267_15060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N4267_15060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N4267_15065 PF00581 Rhodanese-like domain N4267_15070 PF00196 Bacterial regulatory proteins, luxR family N4267_15070 PF00563 EAL domain N4267_15075 PF13419 Haloacid dehalogenase-like hydrolase N4267_15080 PF01740 STAS domain N4267_15080 PF00916 Sulfate permease family N4267_15085 PF00849 RNA pseudouridylate synthase N4267_15105 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath N4267_15115 PF05947 Type VI secretion system, TssF N4267_15135 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE N4267_15145 PF00004 ATPase family associated with various cellular activities (AAA) N4267_15145 PF17871 AAA lid domain N4267_15145 PF10431 C-terminal, D2-small domain, of ClpB protein N4267_15145 PF07724 AAA domain (Cdc48 subfamily) N4267_15150 PF00158 Sigma-54 interaction domain N4267_15150 PF02954 Bacterial regulatory protein, Fis family N4267_15165 PF06744 Type VI secretion protein IcmF C-terminal N4267_15165 PF14331 ImcF-related N-terminal domain N4267_15165 PF06761 Intracellular multiplication and human macrophage-killing N4267_15195 PF05025 RbsD / FucU transport protein family N4267_15200 PF00005 ABC transporter N4267_15205 PF02653 Branched-chain amino acid transport system / permease component N4267_15210 PF13407 Periplasmic binding protein domain N4267_15215 PF00294 pfkB family carbohydrate kinase N4267_15220 PF00356 Bacterial regulatory proteins, lacI family N4267_15225 PF04973 Nicotinamide mononucleotide transporter N4267_15230 PF01048 Phosphorylase superfamily N4267_15240 PF03009 Glycerophosphoryl diester phosphodiesterase family N4267_15245 PF07690 Major Facilitator Superfamily N4267_15260 PF02743 Cache domain N4267_15260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_15260 PF00512 His Kinase A (phospho-acceptor) domain N4267_15265 PF02954 Bacterial regulatory protein, Fis family N4267_15265 PF00072 Response regulator receiver domain N4267_15265 PF00158 Sigma-54 interaction domain N4267_15280 PF01266 FAD dependent oxidoreductase N4267_15285 PF12561 ToxR activated gene A lipoprotein domain N4267_15285 PF00041 Fibronectin type III domain N4267_15290 PF01327 Polypeptide deformylase N4267_15295 PF00175 Oxidoreductase NAD-binding domain N4267_15295 PF00042 Globin N4267_15295 PF00970 Oxidoreductase FAD-binding domain N4267_15300 PF03334 Na+/H+ antiporter subunit N4267_15305 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) N4267_15310 PF01899 Na+/H+ ion antiporter subunit N4267_15315 PF00361 Proton-conducting membrane transporter N4267_15320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N4267_15325 PF00361 Proton-conducting membrane transporter N4267_15325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N4267_15325 PF13244 Domain of unknown function (DUF4040) N4267_15325 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter N4267_15335 PF00582 Universal stress protein family N4267_15340 PF03222 Tryptophan/tyrosine permease family N4267_15345 PF01212 Beta-eliminating lyase N4267_15350 PF12843 Putative quorum-sensing-regulated virulence factor N4267_15360 PF00990 Diguanylate cyclase, GGDEF domain N4267_15360 PF08448 PAS fold N4267_15360 PF00563 EAL domain N4267_15365 PF00313 'Cold-shock' DNA-binding domain N4267_15385 PF07584 Aerotolerance regulator N-terminal N4267_15385 PF13519 von Willebrand factor type A domain N4267_15400 PF01882 Protein of unknown function DUF58 N4267_15405 PF07726 ATPase family associated with various cellular activities (AAA) N4267_15405 PF17863 AAA lid domain N4267_15410 PF02743 Cache domain N4267_15410 PF00672 HAMP domain N4267_15410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_15425 PF07662 Na+ dependent nucleoside transporter C-terminus N4267_15425 PF07670 Nucleoside recognition N4267_15425 PF01773 Na+ dependent nucleoside transporter N-terminus N4267_15430 PF07687 Peptidase dimerisation domain N4267_15430 PF01546 Peptidase family M20/M25/M40 N4267_15440 PF00158 Sigma-54 interaction domain N4267_15440 PF01590 GAF domain N4267_15445 PF00175 Oxidoreductase NAD-binding domain N4267_15445 PF00970 Oxidoreductase FAD-binding domain N4267_15445 PF00042 Globin N4267_15450 PF00313 'Cold-shock' DNA-binding domain N4267_15455 PF03889 Alternative ribosome-rescue factor A N4267_15470 PF00072 Response regulator receiver domain N4267_15480 PF01256 Carbohydrate kinase N4267_15480 PF03853 YjeF-related protein N-terminus N4267_15485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4267_15485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4267_15495 PF07885 Ion channel N4267_15505 PF00478 IMP dehydrogenase / GMP reductase domain N4267_15510 PF00145 C-5 cytosine-specific DNA methylase N4267_15515 PF00183 Hsp90 protein N4267_15530 PF00270 DEAD/DEAH box helicase N4267_15530 PF00271 Helicase conserved C-terminal domain N4267_15535 PF03605 Anaerobic c4-dicarboxylate membrane transporter N4267_15540 PF02540 NAD synthase N4267_15545 PF01467 Cytidylyltransferase-like N4267_15550 PF11849 Domain of unknown function (DUF3369) N4267_15560 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_15560 PF00512 His Kinase A (phospho-acceptor) domain N4267_15570 PF03553 Na+/H+ antiporter family N4267_15575 PF07690 Major Facilitator Superfamily N4267_15585 PF00657 GDSL-like Lipase/Acylhydrolase N4267_15590 PF07968 Leukocidin/Hemolysin toxin family N4267_15590 PF12563 Hemolytic toxin N terminal N4267_15590 PF16458 Beta-prism lectin N4267_15595 PF00672 HAMP domain N4267_15595 PF12729 Four helix bundle sensory module for signal transduction N4267_15595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_15600 PF00561 alpha/beta hydrolase fold N4267_15605 PF03280 Proteobacterial lipase chaperone protein N4267_15610 PF05547 Immune inhibitor A peptidase M6 N4267_15610 PF00801 PKD domain N4267_15635 PF01032 FecCD transport family N4267_15640 PF01032 FecCD transport family N4267_15645 PF00005 ABC transporter N4267_15650 PF12833 Helix-turn-helix domain N4267_15655 PF00593 TonB dependent receptor N4267_15655 PF07715 TonB-dependent Receptor Plug Domain N4267_15665 PF00871 Acetokinase family N4267_15670 PF01022 Bacterial regulatory protein, arsR family N4267_15675 PF01758 Sodium Bile acid symporter family N4267_15680 PF14706 Transposase DNA-binding N4267_15680 PF02281 Transposase Tn5 dimerisation domain N4267_15680 PF01609 Transposase DDE domain N4267_15700 PF00512 His Kinase A (phospho-acceptor) domain N4267_15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_15700 PF00672 HAMP domain N4267_15705 PF00072 Response regulator receiver domain N4267_15705 PF00486 Transcriptional regulatory protein, C terminal N4267_15715 PF01261 Xylose isomerase-like TIM barrel N4267_15720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N4267_15730 PF00596 Class II Aldolase and Adducin N-terminal domain N4267_15735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N4267_15740 PF03611 PTS system sugar-specific permease component N4267_15745 PF00455 DeoR C terminal sensor domain N4267_15745 PF08220 DeoR-like helix-turn-helix domain N4267_15760 PF00128 Alpha amylase, catalytic domain N4267_15765 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_15780 PF00486 Transcriptional regulatory protein, C terminal N4267_15780 PF00072 Response regulator receiver domain N4267_15785 PF00672 HAMP domain N4267_15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_15785 PF00512 His Kinase A (phospho-acceptor) domain N4267_15805 PF01810 LysE type translocator N4267_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_15810 PF03466 LysR substrate binding domain N4267_15815 PF00672 HAMP domain N4267_15815 PF02743 Cache domain N4267_15815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_15820 PF00282 Pyridoxal-dependent decarboxylase conserved domain N4267_15825 PF07943 Penicillin-binding protein 5, C-terminal domain N4267_15825 PF00768 D-alanyl-D-alanine carboxypeptidase N4267_15840 PF00194 Eukaryotic-type carbonic anhydrase N4267_15845 PF02347 Glycine cleavage system P-protein N4267_15850 PF01597 Glycine cleavage H-protein N4267_15855 PF00464 Serine hydroxymethyltransferase N4267_15865 PF08669 Glycine cleavage T-protein C-terminal barrel domain N4267_15865 PF01571 Aminomethyltransferase folate-binding domain N4267_15870 PF03129 Anticodon binding domain N4267_15870 PF02824 TGS domain N4267_15870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N4267_15870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N4267_15875 PF00707 Translation initiation factor IF-3, C-terminal domain N4267_15875 PF05198 Translation initiation factor IF-3, N-terminal domain N4267_15880 PF01632 Ribosomal protein L35 N4267_15885 PF00453 Ribosomal protein L20 N4267_15890 PF13495 Phage integrase, N-terminal SAM-like domain N4267_15890 PF00589 Phage integrase family N4267_15930 PF02567 Phenazine biosynthesis-like protein N4267_15945 PF00293 NUDIX domain N4267_15960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4267_15995 PF13737 Transposase DDE domain N4267_16045 PF05163 DinB family N4267_16060 PF04229 GrpB protein N4267_16080 PF00583 Acetyltransferase (GNAT) family N4267_16125 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_16135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4267_16355 PF04229 GrpB protein N4267_16370 PF05163 DinB family N4267_16470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N4267_16490 PF00293 NUDIX domain N4267_16615 PF08212 Lipocalin-like domain N4267_16620 PF04229 GrpB protein N4267_16750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4267_16750 PF01872 RibD C-terminal domain N4267_16815 PF13302 Acetyltransferase (GNAT) domain N4267_16840 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_16855 PF07859 alpha/beta hydrolase fold N4267_16870 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB N4267_16875 PF01381 Helix-turn-helix N4267_16905 PF09722 Protein of unknown function (DUF2384) N4267_16930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N4267_16930 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N4267_16935 PF00691 OmpA family N4267_16935 PF13488 Glycine zipper N4267_16940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_16940 PF00672 HAMP domain N4267_16945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N4267_16945 PF01266 FAD dependent oxidoreductase N4267_16950 PF00294 pfkB family carbohydrate kinase N4267_16955 PF08244 Glycosyl hydrolases family 32 C terminal N4267_16955 PF00251 Glycosyl hydrolases family 32 N-terminal domain N4267_16960 PF00356 Bacterial regulatory proteins, lacI family N4267_16965 PF00367 phosphotransferase system, EIIB N4267_16965 PF02378 Phosphotransferase system, EIIC N4267_17010 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_17010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N4267_17025 PF04143 Sulphur transport N4267_17040 PF00873 AcrB/AcrD/AcrF family N4267_17045 PF00881 Nitroreductase family N4267_17050 PF03992 Antibiotic biosynthesis monooxygenase N4267_17055 PF03466 LysR substrate binding domain N4267_17055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_17065 PF06942 GlpM protein N4267_17080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N4267_17080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N4267_17095 PF06114 IrrE N-terminal-like domain N4267_17120 PF02779 Transketolase, pyrimidine binding domain N4267_17120 PF02780 Transketolase, C-terminal domain N4267_17120 PF00456 Transketolase, thiamine diphosphate binding domain N4267_17125 PF00923 Transaldolase/Fructose-6-phosphate aldolase N4267_17130 PF04198 Putative sugar-binding domain N4267_17135 PF00581 Rhodanese-like domain N4267_17145 PF00899 ThiF family N4267_17150 PF03453 MoeA N-terminal region (domain I and II) N4267_17150 PF00994 Probable molybdopterin binding domain N4267_17150 PF03454 MoeA C-terminal region (domain IV) N4267_17155 PF01227 GTP cyclohydrolase I N4267_17160 PF01625 Peptide methionine sulfoxide reductase N4267_17160 PF01641 SelR domain N4267_17165 PF01268 Formate--tetrahydrofolate ligase N4267_17170 PF01741 Large-conductance mechanosensitive channel, MscL N4267_17185 PF03466 LysR substrate binding domain N4267_17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_17190 PF13419 Haloacid dehalogenase-like hydrolase N4267_17195 PF14760 Rnk N-terminus N4267_17195 PF01272 Transcription elongation factor, GreA/GreB, C-term N4267_17200 PF13419 Haloacid dehalogenase-like hydrolase N4267_17205 PF00202 Aminotransferase class-III N4267_17210 PF00266 Aminotransferase class-V N4267_17220 PF00005 ABC transporter N4267_17225 PF00528 Binding-protein-dependent transport system inner membrane component N4267_17230 PF00392 Bacterial regulatory proteins, gntR family N4267_17230 PF07702 UTRA domain N4267_17240 PF00854 POT family N4267_17265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4267_17270 PF00528 Binding-protein-dependent transport system inner membrane component N4267_17275 PF12911 N-terminal TM domain of oligopeptide transport permease C N4267_17275 PF00528 Binding-protein-dependent transport system inner membrane component N4267_17280 PF00005 ABC transporter N4267_17280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N4267_17285 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_17285 PF12804 MobA-like NTP transferase domain N4267_17285 PF03479 Plants and Prokaryotes Conserved (PCC) domain N4267_17300 PF00043 Glutathione S-transferase, C-terminal domain N4267_17300 PF02798 Glutathione S-transferase, N-terminal domain N4267_17320 PF03061 Thioesterase superfamily N4267_17330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N4267_17330 PF12793 Sugar transport-related sRNA regulator N-term N4267_17335 PF07715 TonB-dependent Receptor Plug Domain N4267_17335 PF00593 TonB dependent receptor N4267_17340 PF03466 LysR substrate binding domain N4267_17340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_17345 PF13607 Succinyl-CoA ligase like flavodoxin domain N4267_17345 PF13380 CoA binding domain N4267_17345 PF00583 Acetyltransferase (GNAT) family N4267_17355 PF07478 D-ala D-ala ligase C-terminus N4267_17355 PF01820 D-ala D-ala ligase N-terminus N4267_17365 PF01253 Translation initiation factor SUI1 N4267_17370 PF01797 Transposase IS200 like N4267_17375 PF03701 Uncharacterised protein family (UPF0181) N4267_17390 PF00072 Response regulator receiver domain N4267_17390 PF00486 Transcriptional regulatory protein, C terminal N4267_17400 PF02233 NAD(P) transhydrogenase beta subunit N4267_17405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N4267_17405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N4267_17405 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N4267_17420 PF00990 Diguanylate cyclase, GGDEF domain N4267_17420 PF17158 Membrane-associated sensor, integral membrane domain N4267_17440 PF08448 PAS fold N4267_17440 PF00990 Diguanylate cyclase, GGDEF domain N4267_17470 PF08274 PhnA Zinc-Ribbon N4267_17470 PF03831 PhnA domain N4267_17480 PF03741 Integral membrane protein TerC family N4267_17485 PF02872 5'-nucleotidase, C-terminal domain N4267_17485 PF00149 Calcineurin-like phosphoesterase N4267_17490 PF11398 Protein of unknown function (DUF2813) N4267_17495 PF06496 Protein of unknown function (DUF1097) N4267_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_17500 PF03466 LysR substrate binding domain N4267_17505 PF01226 Formate/nitrite transporter N4267_17510 PF04264 YceI-like domain N4267_17515 PF01292 Prokaryotic cytochrome b561 N4267_17525 PF00563 EAL domain N4267_17525 PF10388 EAL-domain associated signalling protein domain N4267_17540 PF02416 mttA/Hcf106 family N4267_17545 PF00072 Response regulator receiver domain N4267_17545 PF00486 Transcriptional regulatory protein, C terminal N4267_17550 PF00512 His Kinase A (phospho-acceptor) domain N4267_17550 PF13493 Domain of unknown function (DUF4118) N4267_17550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_17550 PF02702 Osmosensitive K+ channel His kinase sensor domain N4267_17555 PF10371 Domain of unknown function N4267_17555 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase N4267_17555 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg N4267_17555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N4267_17555 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II N4267_17560 PF02705 K+ potassium transporter N4267_17565 PF01926 50S ribosome-binding GTPase N4267_17570 PF02492 CobW/HypB/UreG, nucleotide-binding domain N4267_17570 PF07683 Cobalamin synthesis protein cobW C-terminal domain N4267_17575 PF00654 Voltage gated chloride channel N4267_17585 PF00155 Aminotransferase class I and II N4267_17590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_17590 PF00072 Response regulator receiver domain N4267_17595 PF13476 AAA domain N4267_17600 PF12320 Type 5 capsule protein repressor C-terminal domain N4267_17600 PF00149 Calcineurin-like phosphoesterase N4267_17605 PF00356 Bacterial regulatory proteins, lacI family N4267_17605 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N4267_17610 PF00381 PTS HPr component phosphorylation site N4267_17610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N4267_17615 PF00294 pfkB family carbohydrate kinase N4267_17620 PF02378 Phosphotransferase system, EIIC N4267_17620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N4267_17625 PF08443 RimK-like ATP-grasp domain N4267_17625 PF18030 RimK PreATP-grasp domain N4267_17630 PF00155 Aminotransferase class I and II N4267_17640 PF13597 Anaerobic ribonucleoside-triphosphate reductase N4267_17640 PF03477 ATP cone domain N4267_17650 PF13419 Haloacid dehalogenase-like hydrolase N4267_17655 PF12729 Four helix bundle sensory module for signal transduction N4267_17655 PF00672 HAMP domain N4267_17655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_17660 PF03606 C4-dicarboxylate anaerobic carrier N4267_17665 PF03313 Serine dehydratase alpha chain N4267_17665 PF03315 Serine dehydratase beta chain N4267_17670 PF00196 Bacterial regulatory proteins, luxR family N4267_17670 PF00072 Response regulator receiver domain N4267_17675 PF07730 Histidine kinase N4267_17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_17675 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N4267_17675 PF00672 HAMP domain N4267_17680 PF13187 4Fe-4S dicluster domain N4267_17680 PF12838 4Fe-4S dicluster domain N4267_17690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N4267_17690 PF00384 Molybdopterin oxidoreductase N4267_17690 PF01568 Molydopterin dinucleotide binding domain N4267_17695 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) N4267_17700 PF03264 NapC/NirT cytochrome c family, N-terminal region N4267_17710 PF01966 HD domain N4267_17715 PF00196 Bacterial regulatory proteins, luxR family N4267_17715 PF00072 Response regulator receiver domain N4267_17720 PF05231 MASE1 N4267_17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_17720 PF07730 Histidine kinase N4267_17725 PF07690 Major Facilitator Superfamily N4267_17735 PF00528 Binding-protein-dependent transport system inner membrane component N4267_17740 PF00005 ABC transporter N4267_17740 PF08402 TOBE domain N4267_17745 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus N4267_17755 PF02803 Thiolase, C-terminal domain N4267_17755 PF00108 Thiolase, N-terminal domain N4267_17760 PF00106 short chain dehydrogenase N4267_17765 PF07549 SecD/SecF GG Motif N4267_17765 PF02355 Protein export membrane protein N4267_17770 PF13721 SecD export protein N-terminal TM region N4267_17770 PF07549 SecD/SecF GG Motif N4267_17770 PF02355 Protein export membrane protein N4267_17785 PF00990 Diguanylate cyclase, GGDEF domain N4267_17790 PF00483 Nucleotidyl transferase N4267_17795 PF00704 Glycosyl hydrolases family 18 N4267_17795 PF06483 Chitinase C N4267_17800 PF00465 Iron-containing alcohol dehydrogenase N4267_17810 PF14532 Sigma-54 interaction domain N4267_17810 PF02954 Bacterial regulatory protein, Fis family N4267_17810 PF00072 Response regulator receiver domain N4267_17815 PF02743 Cache domain N4267_17815 PF00512 His Kinase A (phospho-acceptor) domain N4267_17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_17825 PF07690 Major Facilitator Superfamily N4267_17830 PF02887 Pyruvate kinase, alpha/beta domain N4267_17830 PF00224 Pyruvate kinase, barrel domain N4267_17835 PF00672 HAMP domain N4267_17835 PF00512 His Kinase A (phospho-acceptor) domain N4267_17835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_17835 PF00072 Response regulator receiver domain N4267_17835 PF01627 Hpt domain N4267_17840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N4267_17845 PF02142 MGS-like domain N4267_17850 PF00857 Isochorismatase family N4267_17855 PF01219 Prokaryotic diacylglycerol kinase N4267_17860 PF00580 UvrD/REP helicase N-terminal domain N4267_17860 PF13361 UvrD-like helicase C-terminal domain N4267_17860 PF12462 DNA helicase IV / RNA helicase N terminal N4267_17865 PF12805 FUSC-like inner membrane protein yccS N4267_17870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_17870 PF00512 His Kinase A (phospho-acceptor) domain N4267_17870 PF08448 PAS fold N4267_17870 PF13188 PAS domain N4267_17870 PF00072 Response regulator receiver domain N4267_17895 PF03459 TOBE domain N4267_17895 PF00005 ABC transporter N4267_17900 PF00528 Binding-protein-dependent transport system inner membrane component N4267_17910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N4267_17910 PF07685 CobB/CobQ-like glutamine amidotransferase domain N4267_17915 PF14706 Transposase DNA-binding N4267_17915 PF02281 Transposase Tn5 dimerisation domain N4267_17915 PF01609 Transposase DDE domain N4267_17955 PF02311 AraC-like ligand binding domain N4267_17955 PF12833 Helix-turn-helix domain N4267_17960 PF00593 TonB dependent receptor N4267_17960 PF07715 TonB-dependent Receptor Plug Domain N4267_17965 PF07690 Major Facilitator Superfamily N4267_17970 PF00501 AMP-binding enzyme N4267_17970 PF00668 Condensation domain N4267_17970 PF08242 Methyltransferase domain N4267_17970 PF00550 Phosphopantetheine attachment site N4267_17975 PF13193 AMP-binding enzyme C-terminal domain N4267_17975 PF00668 Condensation domain N4267_17975 PF00550 Phosphopantetheine attachment site N4267_17975 PF00501 AMP-binding enzyme N4267_17990 PF00425 chorismate binding enzyme N4267_17995 PF00501 AMP-binding enzyme N4267_17995 PF13193 AMP-binding enzyme C-terminal domain N4267_18000 PF02028 BCCT, betaine/carnitine/choline family transporter N4267_18005 PF13977 BetI-type transcriptional repressor, C-terminal N4267_18005 PF00440 Bacterial regulatory proteins, tetR family N4267_18010 PF00171 Aldehyde dehydrogenase family N4267_18015 PF05199 GMC oxidoreductase N4267_18015 PF00732 GMC oxidoreductase N4267_18020 PF00664 ABC transporter transmembrane region N4267_18020 PF00005 ABC transporter N4267_18025 PF00664 ABC transporter transmembrane region N4267_18025 PF00005 ABC transporter N4267_18035 PF09308 LuxQ, periplasmic N4267_18035 PF00072 Response regulator receiver domain N4267_18035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_18035 PF00512 His Kinase A (phospho-acceptor) domain N4267_18040 PF13407 Periplasmic binding protein domain N4267_18050 PF01541 GIY-YIG catalytic domain N4267_18055 PF04337 Protein of unknown function, DUF480 N4267_18065 PF04363 Protein of unknown function (DUF496) N4267_18075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N4267_18075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N4267_18080 PF00230 Major intrinsic protein N4267_18085 PF01266 FAD dependent oxidoreductase N4267_18085 PF04324 BFD-like [2Fe-2S] binding domain N4267_18090 PF00890 FAD binding domain N4267_18095 PF13183 4Fe-4S dicluster domain N4267_18095 PF02754 Cysteine-rich domain N4267_18100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N4267_18100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N4267_18105 PF00085 Thioredoxin N4267_18110 PF07690 Major Facilitator Superfamily N4267_18130 PF00528 Binding-protein-dependent transport system inner membrane component N4267_18135 PF00528 Binding-protein-dependent transport system inner membrane component N4267_18140 PF00497 Bacterial extracellular solute-binding proteins, family 3 N4267_18145 PF00005 ABC transporter N4267_18155 PF05762 VWA domain containing CoxE-like protein N4267_18160 PF12592 Protein of unknown function (DUF3763) N4267_18160 PF17868 AAA lid domain N4267_18160 PF07728 AAA domain (dynein-related subfamily) N4267_18165 PF00293 NUDIX domain N4267_18170 PF01212 Beta-eliminating lyase N4267_18175 PF00034 Cytochrome c N4267_18180 PF08361 MAATS-type transcriptional repressor, C-terminal region N4267_18180 PF00440 Bacterial regulatory proteins, tetR family N4267_18185 PF00270 DEAD/DEAH box helicase N4267_18185 PF00271 Helicase conserved C-terminal domain N4267_18190 PF04336 Acyl carrier protein phosphodiesterase N4267_18195 PF03222 Tryptophan/tyrosine permease family N4267_18200 PF00672 HAMP domain N4267_18200 PF12729 Four helix bundle sensory module for signal transduction N4267_18200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_18205 PF16363 GDP-mannose 4,6 dehydratase N4267_18210 PF03746 LamB/YcsF family N4267_18220 PF02626 Carboxyltransferase domain, subdomain A and B N4267_18230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N4267_18230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N4267_18240 PF00005 ABC transporter N4267_18245 PF13472 GDSL-like Lipase/Acylhydrolase family N4267_18250 PF12241 Trans-2-enoyl-CoA reductase catalytic region N4267_18250 PF07055 Enoyl reductase FAD binding domain N4267_18250 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N4267_18255 PF00990 Diguanylate cyclase, GGDEF domain N4267_18255 PF00498 FHA domain N4267_18255 PF00563 EAL domain N4267_18265 PF00684 DnaJ central domain N4267_18265 PF01556 DnaJ C terminal domain N4267_18265 PF00226 DnaJ domain N4267_18280 PF13419 Haloacid dehalogenase-like hydrolase N4267_18295 PF00294 pfkB family carbohydrate kinase N4267_18305 PF00271 Helicase conserved C-terminal domain N4267_18305 PF00270 DEAD/DEAH box helicase N4267_18305 PF03880 DbpA RNA binding domain N4267_18310 PF00575 S1 RNA binding domain N4267_18310 PF08206 Ribonuclease B OB domain N4267_18310 PF00773 RNB domain N4267_18320 PF12849 PBP superfamily domain N4267_18325 PF01575 MaoC like domain N4267_18330 PF04244 Deoxyribodipyrimidine photo-lyase-related protein N4267_18335 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading N4267_18335 PF18416 N-acetylglucosamine binding protein domain 2 N4267_18340 PF04151 Bacterial pre-peptidase C-terminal domain N4267_18340 PF02868 Thermolysin metallopeptidase, alpha-helical domain N4267_18340 PF01447 Thermolysin metallopeptidase, catalytic domain N4267_18340 PF07504 Fungalysin/Thermolysin Propeptide Motif N4267_18340 PF03413 Peptidase propeptide and YPEB domain N4267_18345 PF04151 Bacterial pre-peptidase C-terminal domain N4267_18345 PF04389 Peptidase family M28 N4267_18350 PF00491 Arginase family N4267_18355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N4267_18355 PF17810 Arginine decarboxylase helical bundle domain N4267_18355 PF17944 Arginine decarboxylase C-terminal helical extension N4267_18365 PF03448 MgtE intracellular N domain N4267_18365 PF01769 Divalent cation transporter N4267_18365 PF00571 CBS domain N4267_18375 PF00696 Amino acid kinase family N4267_18375 PF13840 ACT domain N4267_18380 PF06339 Ectoine synthase N4267_18385 PF00202 Aminotransferase class-III N4267_18390 PF00583 Acetyltransferase (GNAT) family N4267_18395 PF01329 Pterin 4 alpha carbinolamine dehydratase N4267_18400 PF00351 Biopterin-dependent aromatic amino acid hydroxylase N4267_18405 PF00501 AMP-binding enzyme N4267_18405 PF13193 AMP-binding enzyme C-terminal domain N4267_18425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_18425 PF03466 LysR substrate binding domain N4267_18435 PF00892 EamA-like transporter family N4267_18440 PF00132 Bacterial transferase hexapeptide (six repeats) N4267_18440 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal N4267_18440 PF14602 Hexapeptide repeat of succinyl-transferase N4267_18445 PF03471 Transporter associated domain N4267_18445 PF01595 Cyclin M transmembrane N-terminal domain N4267_18445 PF00571 CBS domain N4267_18450 PF02566 OsmC-like protein N4267_18455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N4267_18460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N4267_18460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N4267_18480 PF07992 Pyridine nucleotide-disulphide oxidoreductase N4267_18485 PF13520 Amino acid permease N4267_18490 PF00990 Diguanylate cyclase, GGDEF domain N4267_18500 PF00248 Aldo/keto reductase family N4267_18505 PF00128 Alpha amylase, catalytic domain N4267_18515 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N4267_18520 PF12262 Bacterial virulence factor lipase N-terminal N4267_18530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N4267_18530 PF00672 HAMP domain N4267_18530 PF02743 Cache domain N4267_18535 PF02868 Thermolysin metallopeptidase, alpha-helical domain N4267_18535 PF01447 Thermolysin metallopeptidase, catalytic domain N4267_18535 PF03413 Peptidase propeptide and YPEB domain N4267_18535 PF07504 Fungalysin/Thermolysin Propeptide Motif N4267_18535 PF04151 Bacterial pre-peptidase C-terminal domain N4267_18540 PF03922 OmpW family N4267_18550 PF00768 D-alanyl-D-alanine carboxypeptidase N4267_18555 PF17876 Cold shock domain N4267_18555 PF00773 RNB domain N4267_18555 PF00575 S1 RNA binding domain N4267_18555 PF08461 Ribonuclease R winged-helix domain N4267_18555 PF08206 Ribonuclease B OB domain N4267_18560 PF00313 'Cold-shock' DNA-binding domain N4267_18570 PF00291 Pyridoxal-phosphate dependent enzyme N4267_18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_18575 PF03466 LysR substrate binding domain N4267_18585 PF01979 Amidohydrolase family N4267_18600 PF00672 HAMP domain N4267_18600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N4267_18600 PF18698 Histidine kinase sensor domain N4267_18600 PF00512 His Kinase A (phospho-acceptor) domain N4267_18605 PF00072 Response regulator receiver domain N4267_18605 PF00486 Transcriptional regulatory protein, C terminal N4267_18635 PF12167 Arm DNA-binding domain N4267_18635 PF00589 Phage integrase family N4267_18660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N4267_18660 PF03466 LysR substrate binding domain N4267_18685 PF18642 Immunomodulating metalloprotease helical domain N4267_18685 PF13402 Peptidase M60, enhancin and enhancin-like N4267_18685 PF18650 Immunomodulating metalloprotease N-terminal domain N4267_18690 PF00313 'Cold-shock' DNA-binding domain N4267_18695 PF17876 Cold shock domain N4267_18695 PF08461 Ribonuclease R winged-helix domain N4267_18695 PF08206 Ribonuclease B OB domain N4267_18695 PF00773 RNB domain N4267_18695 PF00575 S1 RNA binding domain N4267_18810 PF13289 SIR2-like domain N4267_18815 PF13438 Domain of unknown function (DUF4113) N4267_18815 PF00817 impB/mucB/samB family N4267_18815 PF11799 impB/mucB/samB family C-terminal domain N4267_18815 PF11798 IMS family HHH motif N4267_18820 PF00717 Peptidase S24-like N4267_18830 PF06965 Na+/H+ antiporter 1 N4267_18840 PF00313 'Cold-shock' DNA-binding domain