locus-tag class description F0315_00015 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 F0315_00015 PF09000 Cytotoxic F0315_00015 PF03515 Colicin-like bacteriocin tRNase domain F0315_00020 PF00075 RNase H F0315_00055 PF02508 Rnf-Nqr subunit, membrane protein F0315_00060 PF04060 Putative Fe-S cluster F0315_00065 PF13375 RnfC Barrel sandwich hybrid domain F0315_00065 PF12838 4Fe-4S dicluster domain F0315_00065 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F0315_00065 PF10531 SLBB domain F0315_00070 PF03116 NQR2, RnfD, RnfE family F0315_00075 PF04205 FMN-binding domain F0315_00080 PF02508 Rnf-Nqr subunit, membrane protein F0315_00085 PF00633 Helix-hairpin-helix motif F0315_00085 PF10576 Iron-sulfur binding domain of endonuclease III F0315_00085 PF00730 HhH-GPD superfamily base excision DNA repair protein F0315_00090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F0315_00095 PF10952 Protein of unknown function (DUF2753) F0315_00100 PF00691 OmpA family F0315_00100 PF18393 MotY N-terminal domain F0315_00105 PF00929 Exonuclease F0315_00110 PF13726 Na+-H+ antiporter family F0315_00110 PF03553 Na+/H+ antiporter family F0315_00115 PF00156 Phosphoribosyl transferase domain F0315_00120 PF02674 Colicin V production protein F0315_00125 PF05036 Sporulation related domain F0315_00130 PF02875 Mur ligase family, glutamate ligase domain F0315_00130 PF08245 Mur ligase middle domain F0315_00135 PF17848 Acetyl-coA carboxylase zinc finger domain F0315_00135 PF01039 Carboxyl transferase domain F0315_00140 PF01416 tRNA pseudouridine synthase F0315_00150 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain F0315_00150 PF00749 tRNA synthetases class I (E and Q), catalytic domain F0315_00155 PF02378 Phosphotransferase system, EIIC F0315_00155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F0315_00155 PF00367 phosphotransferase system, EIIB F0315_00160 PF01979 Amidohydrolase family F0315_00165 PF00480 ROK family F0315_00165 PF01047 MarR family F0315_00170 PF00999 Sodium/hydrogen exchanger family F0315_00170 PF02254 TrkA-N domain F0315_00175 PF13537 Glutamine amidotransferase domain F0315_00175 PF00733 Asparagine synthase F0315_00180 PF02357 Transcription termination factor nusG F0315_00185 PF00854 POT family F0315_00190 PF00762 Ferrochelatase F0315_00195 PF05191 Adenylate kinase, active site lid F0315_00200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_00200 PF00183 Hsp90 protein F0315_00205 PF00486 Transcriptional regulatory protein, C terminal F0315_00210 PF17323 Trans-membrane regulatory protein ToxS F0315_00220 PF12850 Calcineurin-like phosphoesterase superfamily domain F0315_00225 PF08338 Domain of unknown function (DUF1731) F0315_00225 PF01370 NAD dependent epimerase/dehydratase family F0315_00230 PF00106 short chain dehydrogenase F0315_00240 PF00085 Thioredoxin F0315_00245 PF16200 C-terminal region of band_7 F0315_00245 PF01145 SPFH domain / Band 7 family F0315_00250 PF01957 NfeD-like C-terminal, partner-binding F0315_00255 PF13411 MerR HTH family regulatory protein F0315_00265 PF13609 Gram-negative porin F0315_00275 PF03120 NAD-dependent DNA ligase OB-fold domain F0315_00275 PF12826 Helix-hairpin-helix motif F0315_00275 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F0315_00275 PF01653 NAD-dependent DNA ligase adenylation domain F0315_00275 PF00533 BRCA1 C Terminus (BRCT) domain F0315_00280 PF04354 ZipA, C-terminal FtsZ-binding domain F0315_00290 PF00291 Pyridoxal-phosphate dependent enzyme F0315_00300 PF00381 PTS HPr component phosphorylation site F0315_00305 PF02896 PEP-utilising enzyme, TIM barrel domain F0315_00305 PF00391 PEP-utilising enzyme, mobile domain F0315_00305 PF05524 PEP-utilising enzyme, N-terminal F0315_00310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F0315_00315 PF01494 FAD binding domain F0315_00320 PF01938 TRAM domain F0315_00320 PF00919 Uncharacterized protein family UPF0004 F0315_00320 PF04055 Radical SAM superfamily F0315_00325 PF02562 PhoH-like protein F0315_00330 PF02130 Uncharacterized protein family UPF0054 F0315_00335 PF03471 Transporter associated domain F0315_00335 PF00571 CBS domain F0315_00340 PF00795 Carbon-nitrogen hydrolase F0315_00345 PF07295 Zinc-ribbon containing domain F0315_00350 PF08264 Anticodon-binding domain of tRNA F0315_00350 PF00133 tRNA synthetases class I (I, L, M and V) F0315_00350 PF13603 Leucyl-tRNA synthetase, Domain 2 F0315_00355 PF04390 Lipopolysaccharide-assembly F0315_00360 PF06144 DNA polymerase III, delta subunit F0315_00360 PF14840 Processivity clamp loader gamma complex DNA pol III C-term F0315_00370 PF02590 Predicted SPOUT methyltransferase F0315_00375 PF03717 Penicillin-binding Protein dimerisation domain F0315_00375 PF00905 Penicillin binding protein transpeptidase domain F0315_00380 PF01098 Cell cycle protein F0315_00385 PF05036 Sporulation related domain F0315_00385 PF03330 Lytic transglycolase F0315_00390 PF07943 Penicillin-binding protein 5, C-terminal domain F0315_00390 PF00768 D-alanyl-D-alanine carboxypeptidase F0315_00395 PF04359 Protein of unknown function (DUF493) F0315_00400 PF03099 Biotin/lipoate A/B protein ligase family F0315_00405 PF04055 Radical SAM superfamily F0315_00405 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F0315_00420 PF00464 Serine hydroxymethyltransferase F0315_00440 PF02706 Chain length determinant protein F0315_00440 PF13807 G-rich domain on putative tyrosine kinase F0315_00440 PF13614 AAA domain F0315_00445 PF02563 Polysaccharide biosynthesis/export protein F0315_00445 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F0315_00445 PF10531 SLBB domain F0315_00455 PF02397 Bacterial sugar transferase F0315_00485 PF03808 Glycosyl transferase WecB/TagA/CpsF family F0315_00495 PF00862 Sucrose synthase F0315_00495 PF00534 Glycosyl transferases group 1 F0315_00505 PF00132 Bacterial transferase hexapeptide (six repeats) F0315_00525 PF12464 Maltose acetyltransferase F0315_00525 PF14602 Hexapeptide repeat of succinyl-transferase F0315_00530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F0315_00530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F0315_00530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F0315_00535 PF02350 UDP-N-acetylglucosamine 2-epimerase F0315_00540 PF01451 Low molecular weight phosphotyrosine protein phosphatase F0315_00545 PF00873 AcrB/AcrD/AcrF family F0315_00550 PF13533 Biotin-lipoyl like F0315_00585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_00585 PF00512 His Kinase A (phospho-acceptor) domain F0315_00585 PF00672 HAMP domain F0315_00590 PF00486 Transcriptional regulatory protein, C terminal F0315_00590 PF00072 Response regulator receiver domain F0315_00595 PF16657 Maltogenic Amylase, C-terminal domain F0315_00595 PF00128 Alpha amylase, catalytic domain F0315_00600 PF00367 phosphotransferase system, EIIB F0315_00600 PF02378 Phosphotransferase system, EIIC F0315_00605 PF00356 Bacterial regulatory proteins, lacI family F0315_00615 PF09383 NIL domain F0315_00615 PF00005 ABC transporter F0315_00620 PF00528 Binding-protein-dependent transport system inner membrane component F0315_00625 PF03180 NLPA lipoprotein F0315_00630 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) F0315_00635 PF07348 Syd protein (SUKH-2) F0315_00640 PF14489 QueF-like protein F0315_00640 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term F0315_00650 PF00990 Diguanylate cyclase, GGDEF domain F0315_00655 PF11892 Domain of unknown function (DUF3412) F0315_00655 PF03641 Possible lysine decarboxylase F0315_00655 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases F0315_00660 PF01367 5'-3' exonuclease, C-terminal SAM fold F0315_00660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F0315_00665 PF04241 Protein of unknown function (DUF423) F0315_00670 PF03466 LysR substrate binding domain F0315_00670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_00675 PF02568 Thiamine biosynthesis protein (ThiI) F0315_00675 PF02926 THUMP domain F0315_00680 PF00691 OmpA family F0315_00680 PF13677 Membrane MotB of proton-channel complex MotA/MotB F0315_00685 PF01618 MotA/TolQ/ExbB proton channel family F0315_00690 PF02609 Exonuclease VII small subunit F0315_00695 PF00348 Polyprenyl synthetase F0315_00700 PF02780 Transketolase, C-terminal domain F0315_00700 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F0315_00700 PF02779 Transketolase, pyrimidine binding domain F0315_00705 PF00849 RNA pseudouridylate synthase F0315_00735 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F0315_00740 PF03806 AbgT putative transporter family F0315_00745 PF00444 Ribosomal protein L36 F0315_00750 PF01197 Ribosomal protein L31 F0315_00755 PF01980 tRNA-methyltransferase O F0315_00755 PF18389 TrmO C-terminal domain F0315_00760 PF03129 Anticodon binding domain F0315_00760 PF04073 Aminoacyl-tRNA editing domain F0315_00760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F0315_00770 PF06786 Uncharacterised protein family (UPF0253) F0315_00780 PF02769 AIR synthase related protein, C-terminal domain F0315_00780 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F0315_00780 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal F0315_00790 PF01464 Transglycosylase SLT domain F0315_00790 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0315_00795 PF14437 MafB19-like deaminase F0315_00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_00800 PF03466 LysR substrate binding domain F0315_00805 PF00107 Zinc-binding dehydrogenase F0315_00805 PF08240 Alcohol dehydrogenase GroES-like domain F0315_00810 PF00756 Putative esterase F0315_00815 PF03806 AbgT putative transporter family F0315_00845 PF07963 Prokaryotic N-terminal methylation motif F0315_00845 PF00114 Pilin (bacterial filament) F0315_00850 PF00684 DnaJ central domain F0315_00850 PF01556 DnaJ C terminal domain F0315_00850 PF00226 DnaJ domain F0315_00855 PF00012 Hsp70 protein F0315_00865 PF01297 Zinc-uptake complex component A periplasmic F0315_00880 PF01025 GrpE F0315_00885 PF01513 ATP-NAD kinase F0315_00890 PF02463 RecF/RecN/SMC N terminal domain F0315_00895 PF04355 SmpA / OmlA family F0315_00900 PF03658 RnfH family Ubiquitin F0315_00905 PF03364 Polyketide cyclase / dehydrase and lipid transport F0315_00910 PF01668 SmpB protein F0315_00920 PF13356 Arm DNA-binding domain F0315_00920 PF00589 Phage integrase family F0315_00930 PF09615 CRISPR-associated protein (Cas_Csy3) F0315_00935 PF09614 CRISPR-associated protein (Cas_Csy2) F0315_00940 PF09611 CRISPR-associated protein (Cas_Csy1) F0315_00945 PF18019 HD domain F0315_00950 PF01867 CRISPR associated protein Cas1 F0315_00960 PF05638 Type VI secretion system effector, Hcp F0315_00965 PF04717 Type VI secretion system, phage-baseplate injector F0315_00965 PF16671 Actin cross-linking domain F0315_01015 PF04002 RadC-like JAB domain F0315_01050 PF13356 Arm DNA-binding domain F0315_01050 PF00589 Phage integrase family F0315_01065 PF08463 EcoEI R protein C-terminal F0315_01065 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) F0315_01065 PF04851 Type III restriction enzyme, res subunit F0315_01065 PF00271 Helicase conserved C-terminal domain F0315_01070 PF01555 DNA methylase F0315_01095 PF12161 HsdM N-terminal domain F0315_01095 PF02384 N-6 DNA Methylase F0315_01100 PF01420 Type I restriction modification DNA specificity domain F0315_01115 PF02796 Helix-turn-helix domain of resolvase F0315_01115 PF00239 Resolvase, N terminal domain F0315_01135 PF13958 Toxin ToxN, type III toxin-antitoxin system F0315_01150 PF00717 Peptidase S24-like F0315_01180 PF04851 Type III restriction enzyme, res subunit F0315_01180 PF00271 Helicase conserved C-terminal domain F0315_01205 PF11953 Domain of unknown function (DUF3470) F0315_01205 PF00037 4Fe-4S binding domain F0315_01210 PF08032 RNA 2'-O ribose methyltransferase substrate binding F0315_01210 PF00588 SpoU rRNA Methylase family F0315_01215 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F0315_01220 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase F0315_01225 PF04223 Citrate lyase, alpha subunit (CitF) F0315_01230 PF03328 HpcH/HpaI aldolase/citrate lyase family F0315_01235 PF06857 Malonate decarboxylase delta subunit (MdcD) F0315_01240 PF08218 Citrate lyase ligase C-terminal domain F0315_01245 PF03390 2-hydroxycarboxylate transporter family F0315_01250 PF04277 Oxaloacetate decarboxylase, gamma chain F0315_01255 PF02436 Conserved carboxylase domain F0315_01255 PF00364 Biotin-requiring enzyme F0315_01255 PF00682 HMGL-like F0315_01260 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F0315_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_01265 PF17203 Single cache domain 3 F0315_01270 PF00072 Response regulator receiver domain F0315_01270 PF12431 Transcriptional regulator F0315_01280 PF00563 EAL domain F0315_01280 PF12792 CSS motif domain associated with EAL F0315_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_01290 PF03466 LysR substrate binding domain F0315_01295 PF01266 FAD dependent oxidoreductase F0315_01300 PF01235 Sodium:alanine symporter family F0315_01305 PF00753 Metallo-beta-lactamase superfamily F0315_01305 PF14863 Alkyl sulfatase dimerisation F0315_01305 PF14864 Alkyl sulfatase C-terminal F0315_01310 PF03466 LysR substrate binding domain F0315_01310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_01315 PF01184 GPR1/FUN34/yaaH family F0315_01320 PF00704 Glycosyl hydrolases family 18 F0315_01320 PF06483 Chitinase C F0315_01325 PF00117 Glutamine amidotransferase class-I F0315_01325 PF00958 GMP synthase C terminal domain F0315_01325 PF02540 NAD synthase F0315_01330 PF00571 CBS domain F0315_01330 PF00478 IMP dehydrogenase / GMP reductase domain F0315_01335 PF13742 OB-fold nucleic acid binding domain F0315_01335 PF02601 Exonuclease VII, large subunit F0315_01350 PF01926 50S ribosome-binding GTPase F0315_01350 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F0315_01355 PF13360 PQQ-like domain F0315_01360 PF09976 Tetratricopeptide repeat-like domain F0315_01365 PF03129 Anticodon binding domain F0315_01365 PF13393 Histidyl-tRNA synthetase F0315_01370 PF04551 GcpE protein F0315_01375 PF13464 Domain of unknown function (DUF4115) F0315_01380 PF04055 Radical SAM superfamily F0315_01385 PF00334 Nucleoside diphosphate kinase F0315_01390 PF00883 Cytosol aminopeptidase family, catalytic domain F0315_01390 PF12404 Peptidase F0315_01395 PF04384 Iron-sulphur cluster assembly F0315_01400 PF00111 2Fe-2S iron-sulfur cluster binding domain F0315_01405 PF00012 Hsp70 protein F0315_01410 PF00226 DnaJ domain F0315_01410 PF07743 HSCB C-terminal oligomerisation domain F0315_01415 PF01521 Iron-sulphur cluster biosynthesis F0315_01420 PF01592 NifU-like N terminal domain F0315_01425 PF00266 Aminotransferase class-V F0315_01430 PF02082 Transcriptional regulator F0315_01435 PF00588 SpoU rRNA Methylase family F0315_01440 PF00459 Inositol monophosphatase family F0315_01445 PF02355 Protein export membrane protein F0315_01445 PF07549 SecD/SecF GG Motif F0315_01450 PF02355 Protein export membrane protein F0315_01450 PF07549 SecD/SecF GG Motif F0315_01450 PF13721 SecD export protein N-terminal TM region F0315_01455 PF02699 Preprotein translocase subunit F0315_01460 PF01702 Queuine tRNA-ribosyltransferase F0315_01470 PF02547 Queuosine biosynthesis protein F0315_01475 PF00571 CBS domain F0315_01480 PF00463 Isocitrate lyase family F0315_01485 PF01274 Malate synthase F0315_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_01490 PF03466 LysR substrate binding domain F0315_01495 PF10417 C-terminal domain of 1-Cys peroxiredoxin F0315_01495 PF00578 AhpC/TSA family F0315_01500 PF03932 CutC family F0315_01505 PF03976 Polyphosphate kinase 2 (PPK2) F0315_01510 PF01895 PhoU domain F0315_01515 PF00005 ABC transporter F0315_01520 PF00528 Binding-protein-dependent transport system inner membrane component F0315_01525 PF00528 Binding-protein-dependent transport system inner membrane component F0315_01530 PF17941 Polyphosphate kinase C-terminal domain 1 F0315_01530 PF13090 Polyphosphate kinase C-terminal domain 2 F0315_01530 PF02503 Polyphosphate kinase middle domain F0315_01530 PF13089 Polyphosphate kinase N-terminal domain F0315_01535 PF02541 Ppx/GppA phosphatase family F0315_01540 PF12849 PBP superfamily domain F0315_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_01545 PF00512 His Kinase A (phospho-acceptor) domain F0315_01545 PF00989 PAS fold F0315_01545 PF11808 Phosphate regulon sensor protein PhoR F0315_01550 PF00486 Transcriptional regulatory protein, C terminal F0315_01550 PF00072 Response regulator receiver domain F0315_01555 PF04381 Putative exonuclease, RdgC F0315_01565 PF00037 4Fe-4S binding domain F0315_01575 PF00881 Nitroreductase family F0315_01585 PF01738 Dienelactone hydrolase family F0315_01620 PF17871 AAA lid domain F0315_01620 PF00004 ATPase family associated with various cellular activities (AAA) F0315_01620 PF02861 Clp amino terminal domain, pathogenicity island component F0315_01620 PF10431 C-terminal, D2-small domain, of ClpB protein F0315_01620 PF07724 AAA domain (Cdc48 subfamily) F0315_01630 PF01479 S4 domain F0315_01630 PF00849 RNA pseudouridylate synthase F0315_01635 PF13525 Outer membrane lipoprotein F0315_01640 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F0315_01645 PF01817 Chorismate mutase type II F0315_01645 PF00800 Prephenate dehydratase F0315_01650 PF13416 Bacterial extracellular solute-binding protein F0315_01655 PF00990 Diguanylate cyclase, GGDEF domain F0315_01655 PF00563 EAL domain F0315_01660 PF01931 Protein of unknown function DUF84 F0315_01665 PF01371 Trp repressor protein F0315_01670 PF14718 Soluble lytic murein transglycosylase L domain F0315_01670 PF01464 Transglycosylase SLT domain F0315_01675 PF00005 ABC transporter F0315_01675 PF12848 ABC transporter F0315_01680 PF07238 PilZ domain F0315_01685 PF01817 Chorismate mutase type II F0315_01685 PF02153 Prephenate dehydrogenase F0315_01690 PF00793 DAHP synthetase I family F0315_01695 PF07694 5TMR of 5TMR-LYT F0315_01695 PF06580 Histidine kinase F0315_01700 PF04397 LytTr DNA-binding domain F0315_01700 PF00072 Response regulator receiver domain F0315_01705 PF00933 Glycosyl hydrolase family 3 N terminal domain F0315_01710 PF03702 Anhydro-N-acetylmuramic acid kinase F0315_01715 PF13580 SIS domain F0315_01730 PF02554 Carbon starvation protein CstA F0315_01735 PF02401 LytB protein F0315_01740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0315_01745 PF01252 Signal peptidase (SPase) II F0315_01750 PF08264 Anticodon-binding domain of tRNA F0315_01750 PF06827 Zinc finger found in FPG and IleRS F0315_01750 PF00133 tRNA synthetases class I (I, L, M and V) F0315_01755 PF01687 Riboflavin kinase F0315_01755 PF06574 FAD synthetase F0315_01760 PF03023 Lipid II flippase MurJ F0315_01765 PF01649 Ribosomal protein S20 F0315_01770 PF01022 Bacterial regulatory protein, arsR family F0315_01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_01775 PF03466 LysR substrate binding domain F0315_01780 PF02690 Na+/Pi-cotransporter F0315_01785 PF00303 Thymidylate synthase F0315_01790 PF01790 Prolipoprotein diacylglyceryl transferase F0315_01795 PF01925 Sulfite exporter TauE/SafE F0315_01800 PF02896 PEP-utilising enzyme, TIM barrel domain F0315_01800 PF00391 PEP-utilising enzyme, mobile domain F0315_01800 PF05524 PEP-utilising enzyme, N-terminal F0315_01800 PF01590 GAF domain F0315_01805 PF00293 NUDIX domain F0315_01810 PF02976 DNA mismatch repair enzyme MutH F0315_01815 PF00248 Aldo/keto reductase family F0315_01825 PF02954 Bacterial regulatory protein, Fis family F0315_01825 PF00072 Response regulator receiver domain F0315_01825 PF00158 Sigma-54 interaction domain F0315_01830 PF00152 tRNA synthetases class II (D, K and N) F0315_01830 PF01336 OB-fold nucleic acid binding domain F0315_01840 PF05525 Branched-chain amino acid transport protein F0315_01845 PF05175 Methyltransferase small domain F0315_01850 PF00271 Helicase conserved C-terminal domain F0315_01850 PF00270 DEAD/DEAH box helicase F0315_01855 PF16658 Class II release factor RF3, C-terminal domain F0315_01855 PF03144 Elongation factor Tu domain 2 F0315_01855 PF00009 Elongation factor Tu GTP binding domain F0315_01860 PF00990 Diguanylate cyclase, GGDEF domain F0315_01860 PF03707 Bacterial signalling protein N terminal repeat F0315_01860 PF00563 EAL domain F0315_01875 PF13508 Acetyltransferase (GNAT) domain F0315_01885 PF03707 Bacterial signalling protein N terminal repeat F0315_01885 PF00990 Diguanylate cyclase, GGDEF domain F0315_01885 PF00563 EAL domain F0315_01900 PF01554 MatE F0315_01910 PF13181 Tetratricopeptide repeat F0315_01910 PF07719 Tetratricopeptide repeat F0315_01915 PF01138 3' exoribonuclease family, domain 1 F0315_01915 PF00013 KH domain F0315_01915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F0315_01915 PF00575 S1 RNA binding domain F0315_01915 PF03725 3' exoribonuclease family, domain 2 F0315_01920 PF00312 Ribosomal protein S15 F0315_01925 PF01509 TruB family pseudouridylate synthase (N terminal domain) F0315_01925 PF09157 Pseudouridine synthase II TruB, C-terminal F0315_01925 PF16198 tRNA pseudouridylate synthase B C-terminal domain F0315_01930 PF02033 Ribosome-binding factor A F0315_01935 PF00009 Elongation factor Tu GTP binding domain F0315_01935 PF04760 Translation initiation factor IF-2, N-terminal region F0315_01935 PF08364 Bacterial translation initiation factor IF-2 associated region F0315_01935 PF11987 Translation-initiation factor 2 F0315_01940 PF00575 S1 RNA binding domain F0315_01940 PF08529 NusA N-terminal domain F0315_01940 PF13184 NusA-like KH domain F0315_01945 PF02576 RimP N-terminal domain F0315_01945 PF17384 RimP C-terminal SH3 domain F0315_01960 PF03840 Preprotein translocase SecG subunit F0315_01965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F0315_01965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F0315_01965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F0315_01965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F0315_01970 PF00809 Pterin binding enzyme F0315_01975 PF17862 AAA+ lid domain F0315_01975 PF06480 FtsH Extracellular F0315_01975 PF01434 Peptidase family M41 F0315_01975 PF00004 ATPase family associated with various cellular activities (AAA) F0315_01980 PF01728 FtsJ-like methyltransferase F0315_01985 PF01985 CRS1 / YhbY (CRM) domain F0315_01990 PF01272 Transcription elongation factor, GreA/GreB, C-term F0315_01990 PF03449 Transcription elongation factor, N-terminal F0315_01995 PF13609 Gram-negative porin F0315_02000 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family F0315_02005 PF00579 tRNA synthetases class I (W and Y) F0315_02005 PF01479 S4 domain F0315_02010 PF04225 Opacity-associated protein A LysM-like domain F0315_02010 PF01551 Peptidase family M23 F0315_02015 PF00873 AcrB/AcrD/AcrF family F0315_02025 PF01521 Iron-sulphur cluster biosynthesis F0315_02030 PF00202 Aminotransferase class-III F0315_02040 PF01594 AI-2E family transporter F0315_02045 PF08468 Methyltransferase small domain N-terminal F0315_02045 PF05175 Methyltransferase small domain F0315_02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_02050 PF00072 Response regulator receiver domain F0315_02050 PF00672 HAMP domain F0315_02050 PF01627 Hpt domain F0315_02050 PF00512 His Kinase A (phospho-acceptor) domain F0315_02050 PF17149 Periplasmic sensor domain found in signal transduction proteins F0315_02055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_02060 PF00528 Binding-protein-dependent transport system inner membrane component F0315_02065 PF00528 Binding-protein-dependent transport system inner membrane component F0315_02065 PF12911 N-terminal TM domain of oligopeptide transport permease C F0315_02070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_02070 PF00005 ABC transporter F0315_02075 PF00005 ABC transporter F0315_02075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_02085 PF01869 BadF/BadG/BcrA/BcrD ATPase family F0315_02090 PF00728 Glycosyl hydrolase family 20, catalytic domain F0315_02090 PF02838 Glycosyl hydrolase family 20, domain 2 F0315_02095 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain F0315_02095 PF06165 Glycosyltransferase family 36 F0315_02100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F0315_02100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F0315_02100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F0315_02100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F0315_02105 PF08402 TOBE domain F0315_02105 PF00005 ABC transporter F0315_02115 PF13416 Bacterial extracellular solute-binding protein F0315_02120 PF00909 Ammonium Transporter Family F0315_02125 PF00543 Nitrogen regulatory protein P-II F0315_02130 PF06062 Uncharacterised protein family (UPF0231) F0315_02135 PF11791 Aconitate B N-terminal domain F0315_02135 PF06434 Aconitate hydratase 2 N-terminus F0315_02135 PF00330 Aconitase family (aconitate hydratase) F0315_02140 PF01734 Patatin-like phospholipase F0315_02150 PF00905 Penicillin binding protein transpeptidase domain F0315_02150 PF00912 Transglycosylase F0315_02150 PF14814 Bifunctional transglycosylase second domain F0315_02155 PF08482 ATP-dependent helicase C-terminal F0315_02155 PF00270 DEAD/DEAH box helicase F0315_02155 PF00271 Helicase conserved C-terminal domain F0315_02155 PF04408 Helicase associated domain (HA2) F0315_02165 PF17746 SfsA N-terminal OB domain F0315_02165 PF03749 Sugar fermentation stimulation protein RE domain F0315_02170 PF01258 Prokaryotic dksA/traR C4-type zinc finger F0315_02175 PF00749 tRNA synthetases class I (E and Q), catalytic domain F0315_02180 PF01743 Poly A polymerase head domain F0315_02180 PF12626 Polymerase A arginine-rich C-terminus F0315_02180 PF12627 Probable RNA and SrmB- binding site of polymerase A F0315_02185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F0315_02190 PF02548 Ketopantoate hydroxymethyltransferase F0315_02195 PF02569 Pantoate-beta-alanine ligase F0315_02200 PF01061 ABC-2 type transporter F0315_02205 PF00005 ABC transporter F0315_02210 PF01740 STAS domain F0315_02210 PF00916 Sulfate permease family F0315_02215 PF00484 Carbonic anhydrase F0315_02220 PF00156 Phosphoribosyl transferase domain F0315_02225 PF00440 Bacterial regulatory proteins, tetR family F0315_02230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0315_02235 PF04348 LppC putative lipoprotein F0315_02240 PF02021 Uncharacterised protein family UPF0102 F0315_02245 PF13580 SIS domain F0315_02250 PF04972 BON domain F0315_02255 PF04386 Stringent starvation protein B F0315_02260 PF00043 Glutathione S-transferase, C-terminal domain F0315_02260 PF02798 Glutathione S-transferase, N-terminal domain F0315_02265 PF02167 Cytochrome C1 family F0315_02270 PF00032 Cytochrome b(C-terminal)/b6/petD F0315_02270 PF00033 Cytochrome b/b6/petB F0315_02275 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal F0315_02275 PF00355 Rieske [2Fe-2S] domain F0315_02280 PF00380 Ribosomal protein S9/S16 F0315_02285 PF00572 Ribosomal protein L13 F0315_02290 PF03969 AFG1-like ATPase F0315_02300 PF00595 PDZ domain F0315_02305 PF13180 PDZ domain F0315_02310 PF01245 Ribosomal protein L19 F0315_02315 PF01746 tRNA (Guanine-1)-methyltransferase F0315_02320 PF01782 RimM N-terminal domain F0315_02320 PF05239 PRC-barrel domain F0315_02325 PF00886 Ribosomal protein S16 F0315_02330 PF00448 SRP54-type protein, GTPase domain F0315_02330 PF02881 SRP54-type protein, helical bundle domain F0315_02330 PF02978 Signal peptide binding domain F0315_02335 PF01578 Cytochrome C assembly protein F0315_02340 PF00571 CBS domain F0315_02340 PF03471 Transporter associated domain F0315_02340 PF01595 Cyclin M transmembrane N-terminal domain F0315_02345 PF02664 S-Ribosylhomocysteinase (LuxS) F0315_02350 PF04262 Glutamate-cysteine ligase F0315_02355 PF05193 Peptidase M16 inactive domain F0315_02355 PF00675 Insulinase (Peptidase family M16) F0315_02360 PF09335 SNARE associated Golgi protein F0315_02370 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F0315_02375 PF00682 HMGL-like F0315_02375 PF00364 Biotin-requiring enzyme F0315_02375 PF02436 Conserved carboxylase domain F0315_02380 PF04277 Oxaloacetate decarboxylase, gamma chain F0315_02425 PF02599 Global regulator protein family F0315_02430 PF01842 ACT domain F0315_02430 PF00696 Amino acid kinase family F0315_02430 PF13840 ACT domain F0315_02435 PF01411 tRNA synthetases class II (A) F0315_02435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F0315_02435 PF02272 DHHA1 domain F0315_02440 PF02631 RecX family F0315_02445 PF00154 recA bacterial DNA recombination protein F0315_02450 PF02464 Competence-damaged protein F0315_02455 PF00005 ABC transporter F0315_02455 PF12857 TOBE-like domain F0315_02460 PF00528 Binding-protein-dependent transport system inner membrane component F0315_02465 PF00528 Binding-protein-dependent transport system inner membrane component F0315_02475 PF00291 Pyridoxal-phosphate dependent enzyme F0315_02480 PF05190 MutS family domain IV F0315_02480 PF05188 MutS domain II F0315_02480 PF05192 MutS domain III F0315_02480 PF01624 MutS domain I F0315_02480 PF00488 MutS domain V F0315_02485 PF04545 Sigma-70, region 4 F0315_02485 PF00140 Sigma-70 factor, region 1.2 F0315_02485 PF04542 Sigma-70 region 2 F0315_02485 PF04539 Sigma-70 region 3 F0315_02490 PF01551 Peptidase family M23 F0315_02490 PF01476 LysM domain F0315_02500 PF01975 Survival protein SurE F0315_02505 PF01142 tRNA pseudouridine synthase D (TruD) F0315_02510 PF02542 YgbB family F0315_02515 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F0315_02520 PF04977 Septum formation initiator F0315_02525 PF02673 Bacitracin resistance protein BacA F0315_02530 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F0315_02535 PF02152 Dihydroneopterin aldolase F0315_02545 PF02660 Glycerol-3-phosphate acyltransferase F0315_02550 PF00561 alpha/beta hydrolase fold F0315_02555 PF00814 Glycoprotease family F0315_02560 PF01165 Ribosomal protein S21 F0315_02565 PF09424 Yqey-like protein F0315_02570 PF08275 DNA primase catalytic core, N-terminal domain F0315_02570 PF08278 DNA primase DnaG DnaB-binding F0315_02570 PF10410 DnaB-helicase binding domain of primase F0315_02570 PF01807 CHC2 zinc finger F0315_02575 PF04539 Sigma-70 region 3 F0315_02575 PF04542 Sigma-70 region 2 F0315_02575 PF03979 Sigma-70 factor, region 1.1 F0315_02575 PF04545 Sigma-70, region 4 F0315_02575 PF04546 Sigma-70, non-essential region F0315_02575 PF00140 Sigma-70 factor, region 1.2 F0315_02585 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F0315_02585 PF01348 Type II intron maturase F0315_02590 PF00589 Phage integrase family F0315_02590 PF13356 Arm DNA-binding domain F0315_02620 PF04002 RadC-like JAB domain F0315_02660 PF07510 Protein of unknown function (DUF1524) F0315_02700 PF00075 RNase H F0315_02735 PF03480 Bacterial extracellular solute-binding protein, family 7 F0315_02740 PF01555 DNA methylase F0315_02755 PF18623 TnsE C-terminal domain F0315_02760 PF15978 Tn7-like transposition protein D F0315_02760 PF06527 TniQ F0315_02765 PF13401 AAA domain F0315_02765 PF11426 Tn7 transposition regulator TnsC F0315_02770 PF00665 Integrase core domain F0315_02775 PF08722 TnsA endonuclease N terminal F0315_02775 PF08721 TnsA endonuclease C terminal F0315_02810 PF01380 SIS domain F0315_02815 PF00455 DeoR C terminal sensor domain F0315_02815 PF08220 DeoR-like helix-turn-helix domain F0315_02820 PF00224 Pyruvate kinase, barrel domain F0315_02820 PF02887 Pyruvate kinase, alpha/beta domain F0315_02825 PF04402 Protein of unknown function (DUF541) F0315_02830 PF03466 LysR substrate binding domain F0315_02830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_02835 PF01810 LysE type translocator F0315_02840 PF05552 Conserved TM helix F0315_02840 PF00924 Mechanosensitive ion channel F0315_02845 PF01116 Fructose-bisphosphate aldolase class-II F0315_02850 PF00162 Phosphoglycerate kinase F0315_02855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F0315_02855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F0315_02860 PF00593 TonB dependent receptor F0315_02860 PF07715 TonB-dependent Receptor Plug Domain F0315_02865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_02865 PF03466 LysR substrate binding domain F0315_02870 PF02780 Transketolase, C-terminal domain F0315_02870 PF02779 Transketolase, pyrimidine binding domain F0315_02870 PF00456 Transketolase, thiamine diphosphate binding domain F0315_02875 PF00438 S-adenosylmethionine synthetase, N-terminal domain F0315_02875 PF02772 S-adenosylmethionine synthetase, central domain F0315_02875 PF02773 S-adenosylmethionine synthetase, C-terminal domain F0315_02880 PF10263 SprT-like family F0315_02880 PF17283 SprT-like zinc ribbon domain F0315_02885 PF04231 Endonuclease I F0315_02890 PF04452 RNA methyltransferase F0315_02895 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F0315_02895 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F0315_02900 PF02622 Uncharacterized ACR, COG1678 F0315_02905 PF03652 Holliday junction resolvase F0315_02910 PF00579 tRNA synthetases class I (W and Y) F0315_02910 PF01479 S4 domain F0315_02925 PF00437 Type II/IV secretion system protein F0315_02930 PF00437 Type II/IV secretion system protein F0315_02935 PF01168 Alanine racemase, N-terminal domain F0315_02940 PF03807 NADP oxidoreductase coenzyme F420-dependent F0315_02940 PF14748 Pyrroline-5-carboxylate reductase dimerisation F0315_02945 PF02325 YGGT family F0315_02950 PF02594 Uncharacterised ACR, YggU family COG1872 F0315_02960 PF01725 Ham1 family F0315_02965 PF04055 Radical SAM superfamily F0315_02965 PF06969 HemN C-terminal domain F0315_02970 PF04960 Glutaminase F0315_02975 PF02390 Putative methyltransferase F0315_02980 PF10576 Iron-sulfur binding domain of endonuclease III F0315_02980 PF00730 HhH-GPD superfamily base excision DNA repair protein F0315_02980 PF14815 NUDIX domain F0315_02980 PF00633 Helix-hairpin-helix motif F0315_02985 PF04362 Bacterial Fe(2+) trafficking F0315_02990 PF01464 Transglycosylase SLT domain F0315_02990 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F0315_03015 PF12729 Four helix bundle sensory module for signal transduction F0315_03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_03015 PF00672 HAMP domain F0315_03045 PF05099 Tellurite resistance protein TerB F0315_03045 PF00226 DnaJ domain F0315_03050 PF04453 LPS transport system D F0315_03050 PF03968 OstA-like protein F0315_03055 PF09312 SurA N-terminal domain F0315_03060 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F0315_03065 PF00398 Ribosomal RNA adenine dimethylase F0315_03070 PF04379 ApaG domain F0315_03075 PF00149 Calcineurin-like phosphoesterase F0315_03085 PF00186 Dihydrofolate reductase F0315_03090 PF12821 Threonine/Serine exporter, ThrE F0315_03095 PF06738 Putative threonine/serine exporter F0315_03100 PF01926 50S ribosome-binding GTPase F0315_03100 PF01018 GTP1/OBG F0315_03105 PF01016 Ribosomal L27 protein F0315_03110 PF00829 Ribosomal prokaryotic L21 protein F0315_03115 PF00348 Polyprenyl synthetase F0315_03120 PF13520 Amino acid permease F0315_03125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F0315_03125 PF00056 lactate/malate dehydrogenase, NAD binding domain F0315_03130 PF01316 Arginine repressor, DNA binding domain F0315_03130 PF02863 Arginine repressor, C-terminal domain F0315_03140 PF16868 NMT1-like family F0315_03150 PF00582 Universal stress protein family F0315_03165 PF06877 Regulator of ribonuclease activity B F0315_03180 PF00111 2Fe-2S iron-sulfur cluster binding domain F0315_03180 PF00175 Oxidoreductase NAD-binding domain F0315_03180 PF00970 Oxidoreductase FAD-binding domain F0315_03185 PF03063 Prismane/CO dehydrogenase family F0315_03190 PF01523 Putative modulator of DNA gyrase F0315_03195 PF00795 Carbon-nitrogen hydrolase F0315_03200 PF13502 AsmA-like C-terminal region F0315_03200 PF13116 Protein of unknown function F0315_03205 PF00575 S1 RNA binding domain F0315_03205 PF10150 Ribonuclease E/G family F0315_03210 PF02545 Maf-like protein F0315_03215 PF04093 rod shape-determining protein MreD F0315_03220 PF04085 rod shape-determining protein MreC F0315_03260 PF00114 Pilin (bacterial filament) F0315_03260 PF07963 Prokaryotic N-terminal methylation motif F0315_03270 PF00482 Type II secretion system (T2SS), protein F F0315_03275 PF00437 Type II/IV secretion system protein F0315_03285 PF13401 AAA domain F0315_03285 PF01471 Putative peptidoglycan binding domain F0315_03290 PF03958 Bacterial type II/III secretion system short domain F0315_03290 PF00263 Bacterial type II and III secretion system protein F0315_03310 PF00990 Diguanylate cyclase, GGDEF domain F0315_03310 PF17157 Gammaproteobacterial periplasmic sensor domain F0315_03310 PF00563 EAL domain F0315_03385 PF00436 Single-strand binding protein family F0315_03390 PF00196 Bacterial regulatory proteins, luxR family F0315_03395 PF00483 Nucleotidyl transferase F0315_03400 PF00005 ABC transporter F0315_03400 PF17755 UvrA DNA-binding domain F0315_03400 PF17760 UvrA interaction domain F0315_03410 PF00266 Aminotransferase class-V F0315_03415 PF00696 Amino acid kinase family F0315_03415 PF01842 ACT domain F0315_03420 PF02607 B12 binding domain F0315_03420 PF02574 Homocysteine S-methyltransferase F0315_03420 PF00809 Pterin binding enzyme F0315_03420 PF02965 Vitamin B12 dependent methionine synthase, activation domain F0315_03420 PF02310 B12 binding domain F0315_03425 PF00999 Sodium/hydrogen exchanger family F0315_03490 PF01507 Phosphoadenosine phosphosulfate reductase family F0315_03495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F0315_03495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F0315_03500 PF00258 Flavodoxin F0315_03500 PF00667 FAD binding domain F0315_03500 PF00175 Oxidoreductase NAD-binding domain F0315_03520 PF09583 Phage shock protein G (Phageshock_PspG) F0315_03525 PF01207 Dihydrouridine synthase (Dus) F0315_03530 PF01475 Ferric uptake regulator family F0315_03540 PF12706 Beta-lactamase superfamily domain F0315_03545 PF00342 Phosphoglucose isomerase F0315_03550 PF01894 Uncharacterised protein family UPF0047 F0315_03555 PF00842 Alanine racemase, C-terminal domain F0315_03555 PF01168 Alanine racemase, N-terminal domain F0315_03560 PF03796 DnaB-like helicase C terminal domain F0315_03560 PF00772 DnaB-like helicase N terminal domain F0315_03570 PF01281 Ribosomal protein L9, N-terminal domain F0315_03570 PF03948 Ribosomal protein L9, C-terminal domain F0315_03575 PF01084 Ribosomal protein S18 F0315_03580 PF00436 Single-strand binding protein family F0315_03585 PF01250 Ribosomal protein S6 F0315_03590 PF00210 Ferritin-like domain F0315_03595 PF04324 BFD-like [2Fe-2S] binding domain F0315_03600 PF03143 Elongation factor Tu C-terminal domain F0315_03600 PF00009 Elongation factor Tu GTP binding domain F0315_03600 PF03144 Elongation factor Tu domain 2 F0315_03605 PF00009 Elongation factor Tu GTP binding domain F0315_03605 PF03764 Elongation factor G, domain IV F0315_03605 PF14492 Elongation Factor G, domain II F0315_03605 PF00679 Elongation factor G C-terminus F0315_03605 PF03144 Elongation factor Tu domain 2 F0315_03610 PF00177 Ribosomal protein S7p/S5e F0315_03615 PF00164 Ribosomal protein S12/S23 F0315_03625 PF02635 DsrE/DsrF-like family F0315_03630 PF02635 DsrE/DsrF-like family F0315_03635 PF13309 HTH domain F0315_03635 PF08348 YheO-like PAS domain F0315_03640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0315_03640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F0315_03650 PF04102 SlyX F0315_03655 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) F0315_03660 PF01145 SPFH domain / Band 7 family F0315_03665 PF12221 Bacterial membrane protein N terminal F0315_03665 PF01145 SPFH domain / Band 7 family F0315_03670 PF01926 50S ribosome-binding GTPase F0315_03670 PF13167 GTP-binding GTPase N-terminal F0315_03670 PF16360 GTP-binding GTPase Middle Region F0315_03675 PF17209 Hfq protein F0315_03685 PF01119 DNA mismatch repair protein, C-terminal domain F0315_03685 PF08676 MutL C terminal dimerisation domain F0315_03690 PF01520 N-acetylmuramoyl-L-alanine amidase F0315_03695 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F0315_03700 PF08331 Domain of unknown function (DUF1730) F0315_03750 PF00929 Exonuclease F0315_03755 PF03193 RsgA GTPase F0315_03760 PF02666 Phosphatidylserine decarboxylase F0315_03765 PF00939 Sodium:sulfate symporter transmembrane region F0315_03775 PF01676 Metalloenzyme superfamily F0315_03775 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F0315_03780 PF01551 Peptidase family M23 F0315_03790 PF08360 QacR-like protein, C-terminal region F0315_03790 PF00440 Bacterial regulatory proteins, tetR family F0315_03795 PF01208 Uroporphyrinogen decarboxylase (URO-D) F0315_03800 PF00293 NUDIX domain F0315_03800 PF09297 NADH pyrophosphatase zinc ribbon domain F0315_03805 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ F0315_03810 PF00623 RNA polymerase Rpb1, domain 2 F0315_03810 PF04998 RNA polymerase Rpb1, domain 5 F0315_03810 PF05000 RNA polymerase Rpb1, domain 4 F0315_03810 PF04983 RNA polymerase Rpb1, domain 3 F0315_03810 PF04997 RNA polymerase Rpb1, domain 1 F0315_03815 PF04563 RNA polymerase beta subunit F0315_03815 PF04561 RNA polymerase Rpb2, domain 2 F0315_03815 PF04565 RNA polymerase Rpb2, domain 3 F0315_03815 PF10385 RNA polymerase beta subunit external 1 domain F0315_03815 PF00562 RNA polymerase Rpb2, domain 6 F0315_03815 PF04560 RNA polymerase Rpb2, domain 7 F0315_03820 PF16320 Ribosomal protein L7/L12 dimerisation domain F0315_03820 PF00542 Ribosomal protein L7/L12 C-terminal domain F0315_03825 PF00466 Ribosomal protein L10 F0315_03830 PF00687 Ribosomal protein L1p/L10e family F0315_03835 PF03946 Ribosomal protein L11, N-terminal domain F0315_03835 PF00298 Ribosomal protein L11, RNA binding domain F0315_03840 PF00467 KOW motif F0315_03840 PF02357 Transcription termination factor nusG F0315_03845 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F0315_03850 PF00009 Elongation factor Tu GTP binding domain F0315_03850 PF03144 Elongation factor Tu domain 2 F0315_03850 PF03143 Elongation factor Tu C-terminal domain F0315_03875 PF00485 Phosphoribulokinase / Uridine kinase family F0315_03880 PF02237 Biotin protein ligase C terminal domain F0315_03880 PF03099 Biotin/lipoate A/B protein ligase family F0315_03880 PF08279 HTH domain F0315_03885 PF01565 FAD binding domain F0315_03885 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F0315_03895 PF13091 PLD-like domain F0315_03925 PF00175 Oxidoreductase NAD-binding domain F0315_03935 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F0315_03945 PF07497 Rho termination factor, RNA-binding domain F0315_03945 PF07498 Rho termination factor, N-terminal domain F0315_03945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0315_03950 PF00085 Thioredoxin F0315_03955 PF00271 Helicase conserved C-terminal domain F0315_03955 PF00270 DEAD/DEAH box helicase F0315_03960 PF02541 Ppx/GppA phosphatase family F0315_03965 PF00512 His Kinase A (phospho-acceptor) domain F0315_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_03965 PF00989 PAS fold F0315_03970 PF12832 MFS_1 like family F0315_03990 PF16177 Acetyl-coenzyme A synthetase N-terminus F0315_03990 PF00501 AMP-binding enzyme F0315_03990 PF13193 AMP-binding enzyme C-terminal domain F0315_03995 PF01220 Dehydroquinase class II F0315_04000 PF00364 Biotin-requiring enzyme F0315_04005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F0315_04005 PF02785 Biotin carboxylase C-terminal domain F0315_04005 PF00289 Biotin carboxylase, N-terminal domain F0315_04020 PF01207 Dihydrouridine synthase (Dus) F0315_04025 PF02954 Bacterial regulatory protein, Fis family F0315_04030 PF00356 Bacterial regulatory proteins, lacI family F0315_04030 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0315_04035 PF00920 Dehydratase family F0315_04040 PF01202 Shikimate kinase F0315_04045 PF02447 GntP family permease F0315_04050 PF01081 KDPG and KHG aldolase F0315_04055 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F0315_04055 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F0315_04055 PF01276 Orn/Lys/Arg decarboxylase, major domain F0315_04060 PF13520 Amino acid permease F0315_04065 PF18500 CadC C-terminal domain 1 F0315_04065 PF00486 Transcriptional regulatory protein, C terminal F0315_04070 PF13411 MerR HTH family regulatory protein F0315_04080 PF02142 MGS-like domain F0315_04080 PF01808 AICARFT/IMPCHase bienzyme F0315_04085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F0315_04085 PF02843 Phosphoribosylglycinamide synthetase, C domain F0315_04085 PF02844 Phosphoribosylglycinamide synthetase, N domain F0315_04095 PF00216 Bacterial DNA-binding protein F0315_04100 PF01595 Cyclin M transmembrane N-terminal domain F0315_04100 PF00571 CBS domain F0315_04105 PF04222 Protein of unknown function (DUF416) F0315_04110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0315_04115 PF03167 Uracil DNA glycosylase superfamily F0315_04120 PF00924 Mechanosensitive ion channel F0315_04125 PF00753 Metallo-beta-lactamase superfamily F0315_04125 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain F0315_04125 PF10996 Beta-Casp domain F0315_04135 PF00953 Glycosyl transferase family 4 F0315_04140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F0315_04140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F0315_04140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F0315_04145 PF01238 Phosphomannose isomerase type I F0315_04150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F0315_04150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F0315_04150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F0315_04150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F0315_04155 PF00483 Nucleotidyl transferase F0315_04155 PF01050 Mannose-6-phosphate isomerase F0315_04170 PF00534 Glycosyl transferases group 1 F0315_04170 PF13439 Glycosyltransferase Family 4 F0315_04185 PF00535 Glycosyl transferase family 2 F0315_04220 PF13807 G-rich domain on putative tyrosine kinase F0315_04220 PF13614 AAA domain F0315_04220 PF02706 Chain length determinant protein F0315_04225 PF01451 Low molecular weight phosphotyrosine protein phosphatase F0315_04230 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F0315_04230 PF10531 SLBB domain F0315_04230 PF02563 Polysaccharide biosynthesis/export protein F0315_04240 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF F0315_04250 PF06082 Exopolysaccharide biosynthesis protein YbjH F0315_04260 PF02397 Bacterial sugar transferase F0315_04265 PF01370 NAD dependent epimerase/dehydratase family F0315_04270 PF02719 Polysaccharide biosynthesis protein F0315_04280 PF02350 UDP-N-acetylglucosamine 2-epimerase F0315_04300 PF01209 ubiE/COQ5 methyltransferase family F0315_04305 PF00005 ABC transporter F0315_04315 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase F0315_04320 PF04321 RmlD substrate binding domain F0315_04325 PF00483 Nucleotidyl transferase F0315_04330 PF16363 GDP-mannose 4,6 dehydratase F0315_04335 PF01370 NAD dependent epimerase/dehydratase family F0315_04345 PF00535 Glycosyl transferase family 2 F0315_04350 PF00457 Glycosyl hydrolases family 11 F0315_04350 PF01522 Polysaccharide deacetylase F0315_04355 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F0315_04360 PF04488 Glycosyltransferase sugar-binding region containing DXD motif F0315_04365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F0315_04370 PF00583 Acetyltransferase (GNAT) family F0315_04375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F0315_04395 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F0315_04400 PF00535 Glycosyl transferase family 2 F0315_04405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F0315_04410 PF01467 Cytidylyltransferase-like F0315_04415 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F0315_04415 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F0315_04415 PF06827 Zinc finger found in FPG and IleRS F0315_04425 PF00471 Ribosomal protein L33 F0315_04430 PF00830 Ribosomal L28 family F0315_04435 PF04002 RadC-like JAB domain F0315_04440 PF02743 Cache domain F0315_04440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_04440 PF00672 HAMP domain F0315_04445 PF04127 DNA / pantothenate metabolism flavoprotein F0315_04445 PF02441 Flavoprotein F0315_04455 PF00440 Bacterial regulatory proteins, tetR family F0315_04460 PF03279 Bacterial lipid A biosynthesis acyltransferase F0315_04465 PF03279 Bacterial lipid A biosynthesis acyltransferase F0315_04470 PF00156 Phosphoribosyl transferase domain F0315_04475 PF03725 3' exoribonuclease family, domain 2 F0315_04475 PF01138 3' exoribonuclease family, domain 1 F0315_04480 PF03755 YicC-like family, N-terminal region F0315_04480 PF08340 Domain of unknown function (DUF1732) F0315_04485 PF03350 Uncharacterized protein family, UPF0114 F0315_04490 PF02378 Phosphotransferase system, EIIC F0315_04490 PF00367 phosphotransferase system, EIIB F0315_04495 PF13580 SIS domain F0315_04500 PF01380 SIS domain F0315_04500 PF01418 Helix-turn-helix domain, rpiR family F0315_04510 PF00271 Helicase conserved C-terminal domain F0315_04510 PF00270 DEAD/DEAH box helicase F0315_04510 PF00570 HRDC domain F0315_04510 PF16124 RecQ zinc-binding F0315_04510 PF09382 RQC domain F0315_04515 PF00892 EamA-like transporter family F0315_04525 PF12833 Helix-turn-helix domain F0315_04530 PF01810 LysE type translocator F0315_04535 PF00580 UvrD/REP helicase N-terminal domain F0315_04535 PF13361 UvrD-like helicase C-terminal domain F0315_04540 PF01432 Peptidase family M3 F0315_04545 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F0315_04550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0315_04550 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_04630 PF12911 N-terminal TM domain of oligopeptide transport permease C F0315_04630 PF00528 Binding-protein-dependent transport system inner membrane component F0315_04640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_04645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_04645 PF00005 ABC transporter F0315_04680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F0315_04720 PF00437 Type II/IV secretion system protein F0315_04735 PF04972 BON domain F0315_04735 PF13629 Pilus formation protein N terminal region F0315_04735 PF00263 Bacterial type II and III secretion system protein F0315_04765 PF00580 UvrD/REP helicase N-terminal domain F0315_04765 PF13361 UvrD-like helicase C-terminal domain F0315_04770 PF00440 Bacterial regulatory proteins, tetR family F0315_04775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0315_04780 PF00873 AcrB/AcrD/AcrF family F0315_04785 PF04380 Membrane fusogenic activity F0315_04790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F0315_04790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F0315_04795 PF03466 LysR substrate binding domain F0315_04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_04865 PF12724 Flavodoxin domain F0315_04870 PF02386 Cation transport protein F0315_04875 PF01205 Uncharacterized protein family UPF0029 F0315_04875 PF09186 Domain of unknown function (DUF1949) F0315_04880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F0315_04880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F0315_04880 PF00378 Enoyl-CoA hydratase/isomerase F0315_04885 PF00108 Thiolase, N-terminal domain F0315_04885 PF02803 Thiolase, C-terminal domain F0315_04890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_04890 PF03466 LysR substrate binding domain F0315_04895 PF07690 Major Facilitator Superfamily F0315_04900 PF12804 MobA-like NTP transferase domain F0315_04900 PF00132 Bacterial transferase hexapeptide (six repeats) F0315_04905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F0315_04905 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain F0315_04910 PF02874 ATP synthase alpha/beta family, beta-barrel domain F0315_04910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0315_04915 PF00231 ATP synthase F0315_04920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0315_04920 PF00306 ATP synthase alpha/beta chain, C terminal domain F0315_04920 PF02874 ATP synthase alpha/beta family, beta-barrel domain F0315_04925 PF00213 ATP synthase delta (OSCP) subunit F0315_04930 PF00430 ATP synthase B/B' CF(0) F0315_04935 PF00137 ATP synthase subunit C F0315_04940 PF00119 ATP synthase A chain F0315_04945 PF03899 ATP synthase I chain F0315_04950 PF02195 ParB-like nuclease domain F0315_04950 PF17762 HTH domain found in ParB protein F0315_04955 PF13614 AAA domain F0315_04960 PF02527 rRNA small subunit methyltransferase G F0315_04965 PF13932 GidA associated domain F0315_04965 PF01134 Glucose inhibited division protein A F0315_04975 PF00258 Flavodoxin F0315_04980 PF10396 GTP-binding protein TrmE N-terminus F0315_04980 PF12631 MnmE helical domain F0315_04980 PF01926 50S ribosome-binding GTPase F0315_04985 PF14849 YidC periplasmic domain F0315_04985 PF02096 60Kd inner membrane protein F0315_04990 PF01809 Putative membrane protein insertion efficiency factor F0315_04995 PF00825 Ribonuclease P F0315_05000 PF00468 Ribosomal protein L34 F0315_05005 PF00005 ABC transporter F0315_05010 PF00528 Binding-protein-dependent transport system inner membrane component F0315_05015 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0315_05020 PF00308 Bacterial dnaA protein F0315_05020 PF08299 Bacterial dnaA protein helix-turn-helix F0315_05020 PF11638 DnaA N-terminal domain F0315_05025 PF02768 DNA polymerase III beta subunit, C-terminal domain F0315_05025 PF02767 DNA polymerase III beta subunit, central domain F0315_05025 PF00712 DNA polymerase III beta subunit, N-terminal domain F0315_05030 PF02463 RecF/RecN/SMC N terminal domain F0315_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_05035 PF01751 Toprim domain F0315_05035 PF18053 DNA gyrase B subunit insert domain F0315_05035 PF00986 DNA gyrase B subunit, carboxyl terminus F0315_05035 PF00204 DNA gyrase B F0315_05050 PF00011 Hsp20/alpha crystallin family F0315_05055 PF00155 Aminotransferase class I and II F0315_05060 PF02092 Glycyl-tRNA synthetase beta subunit F0315_05060 PF05746 DALR anticodon binding domain F0315_05065 PF02091 Glycyl-tRNA synthetase alpha subunit F0315_05070 PF01169 Uncharacterized protein family UPF0016 F0315_05080 PF01206 Sulfurtransferase TusA F0315_05090 PF00107 Zinc-binding dehydrogenase F0315_05090 PF08240 Alcohol dehydrogenase GroES-like domain F0315_05095 PF00291 Pyridoxal-phosphate dependent enzyme F0315_05095 PF00585 C-terminal regulatory domain of Threonine dehydratase F0315_05100 PF00920 Dehydratase family F0315_05105 PF01063 Amino-transferase class IV F0315_05115 PF00205 Thiamine pyrophosphate enzyme, central domain F0315_05115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0315_05115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0315_05120 PF13335 Magnesium chelatase, subunit ChlI C-terminal F0315_05120 PF01078 Magnesium chelatase, subunit ChlI F0315_05125 PF01553 Acyltransferase F0315_05130 PF01323 DSBA-like thioredoxin domain F0315_05135 PF01636 Phosphotransferase enzyme family F0315_05140 PF12801 4Fe-4S binding domain F0315_05140 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase F0315_05140 PF13746 4Fe-4S dicluster domain F0315_05145 PF06288 Protein of unknown function (DUF1040) F0315_05155 PF07070 SpoOM protein F0315_05160 PF03006 Haemolysin-III related F0315_05170 PF02386 Cation transport protein F0315_05175 PF02254 TrkA-N domain F0315_05175 PF02080 TrkA-C domain F0315_05180 PF01189 16S rRNA methyltransferase RsmB/F F0315_05180 PF01029 NusB family F0315_05185 PF00551 Formyl transferase F0315_05185 PF02911 Formyl transferase, C-terminal domain F0315_05190 PF01327 Polypeptide deformylase F0315_05195 PF01476 LysM domain F0315_05200 PF17782 DprA winged helix domain F0315_05200 PF02481 DNA recombination-mediator protein A F0315_05205 PF04361 Protein of unknown function (DUF494) F0315_05210 PF01396 Topoisomerase DNA binding C4 zinc finger F0315_05215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F0315_05215 PF02222 ATP-grasp domain F0315_05220 PF00731 AIR carboxylase F0315_05225 PF01300 Telomere recombination F0315_05230 PF01218 Coproporphyrinogen III oxidase F0315_05235 PF08501 Shikimate dehydrogenase substrate binding domain F0315_05235 PF01488 Shikimate / quinate 5-dehydrogenase F0315_05235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F0315_05245 PF00132 Bacterial transferase hexapeptide (six repeats) F0315_05280 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F0315_05285 PF13667 ThiC-associated domain F0315_05285 PF01964 Radical SAM ThiC family F0315_05290 PF02581 Thiamine monophosphate synthase F0315_05295 PF00899 ThiF family F0315_05300 PF02597 ThiS family F0315_05305 PF05690 Thiazole biosynthesis protein ThiG F0315_05310 PF06968 Biotin and Thiamin Synthesis associated domain F0315_05310 PF04055 Radical SAM superfamily F0315_05315 PF00557 Metallopeptidase family M24 F0315_05315 PF01321 Creatinase/Prolidase N-terminal domain F0315_05315 PF00557 Metallopeptidase family M24 F0315_05315 PF01321 Creatinase/Prolidase N-terminal domain F0315_05320 PF03466 LysR substrate binding domain F0315_05320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_05325 PF07690 Major Facilitator Superfamily F0315_05335 PF01037 Lrp/AsnC ligand binding domain F0315_05340 PF00563 EAL domain F0315_05340 PF08448 PAS fold F0315_05340 PF00990 Diguanylate cyclase, GGDEF domain F0315_05345 PF04445 Putative SAM-dependent methyltransferase F0315_05355 PF00892 EamA-like transporter family F0315_05360 PF00582 Universal stress protein family F0315_05365 PF00210 Ferritin-like domain F0315_05370 PF10625 Universal stress protein B (UspB) F0315_05385 PF00665 Integrase core domain F0315_05390 PF13401 AAA domain F0315_05390 PF11426 Tn7 transposition regulator TnsC F0315_05435 PF03412 Peptidase C39 family F0315_05435 PF00664 ABC transporter transmembrane region F0315_05435 PF00005 ABC transporter F0315_05440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0315_05440 PF00529 HlyD membrane-fusion protein of T1SS F0315_05460 PF08447 PAS fold F0315_05460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_05470 PF02646 RmuC family F0315_05475 PF01209 ubiE/COQ5 methyltransferase family F0315_05480 PF02036 SCP-2 sterol transfer family F0315_05485 PF03109 ABC1 family F0315_05490 PF02416 mttA/Hcf106 family F0315_05495 PF02416 mttA/Hcf106 family F0315_05500 PF00902 Sec-independent protein translocase protein (TatC) F0315_05510 PF01554 MatE F0315_05520 PF00717 Peptidase S24-like F0315_05520 PF01726 LexA DNA binding domain F0315_05530 PF01553 Acyltransferase F0315_05535 PF01040 UbiA prenyltransferase family F0315_05540 PF04345 Chorismate lyase F0315_05550 PF03748 Flagellar basal body-associated protein FliL F0315_05555 PF01694 Rhomboid family F0315_05555 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease F0315_05560 PF00581 Rhodanese-like domain F0315_05570 PF01026 TatD related DNase F0315_05575 PF00490 Delta-aminolevulinic acid dehydratase F0315_05590 PF00476 DNA polymerase family A F0315_05590 PF01367 5'-3' exonuclease, C-terminal SAM fold F0315_05590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F0315_05590 PF01612 3'-5' exonuclease F0315_05595 PF01926 50S ribosome-binding GTPase F0315_05600 PF00034 Cytochrome c F0315_05610 PF04220 Der GTPase activator (YihI) F0315_05615 PF10675 Protein of unknown function (DUF2489) F0315_05620 PF06969 HemN C-terminal domain F0315_05620 PF04055 Radical SAM superfamily F0315_05625 PF07219 HemY protein N-terminus F0315_05630 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase F0315_05635 PF02602 Uroporphyrinogen-III synthase HemD F0315_05640 PF03900 Porphobilinogen deaminase, C-terminal domain F0315_05640 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F0315_05650 PF01295 Adenylate cyclase, class-I F0315_05650 PF12633 Adenylate cyclase NT domain F0315_05655 PF01491 Frataxin-like domain F0315_05665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F0315_05665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F0315_05670 PF01678 Diaminopimelate epimerase F0315_05675 PF04340 Protein of unknown function, DUF484 F0315_05680 PF00589 Phage integrase family F0315_05680 PF02899 Phage integrase, N-terminal SAM-like domain F0315_05685 PF13419 Haloacid dehalogenase-like hydrolase F0315_05690 PF00990 Diguanylate cyclase, GGDEF domain F0315_05690 PF10442 FIST C domain F0315_05690 PF00563 EAL domain F0315_05690 PF08495 FIST N domain F0315_05710 PF12146 Serine aminopeptidase, S33 F0315_05715 PF01810 LysE type translocator F0315_05720 PF08668 HDOD domain F0315_05720 PF00563 EAL domain F0315_05725 PF00210 Ferritin-like domain F0315_05770 PF02881 SRP54-type protein, helical bundle domain F0315_05770 PF00448 SRP54-type protein, GTPase domain F0315_05775 PF00005 ABC transporter F0315_05780 PF18075 FtsX extracellular domain F0315_05785 PF04545 Sigma-70, region 4 F0315_05785 PF04542 Sigma-70 region 2 F0315_05785 PF00140 Sigma-70 factor, region 1.2 F0315_05790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0315_05790 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_05795 PF00440 Bacterial regulatory proteins, tetR family F0315_05835 PF00075 RNase H F0315_05840 PF06958 S-type Pyocin F0315_05845 PF01320 Colicin immunity protein / pyocin immunity protein F0315_05865 PF01751 Toprim domain F0315_05865 PF00270 DEAD/DEAH box helicase F0315_05865 PF01131 DNA topoisomerase F0315_05865 PF17915 Reverse gyrase zinc finger F0315_05950 PF04002 RadC-like JAB domain F0315_05955 PF00004 ATPase family associated with various cellular activities (AAA) F0315_05965 PF13006 Insertion element 4 transposase N-terminal F0315_05965 PF01609 Transposase DDE domain F0315_05970 PF05958 tRNA (Uracil-5-)-methyltransferase F0315_05980 PF00593 TonB dependent receptor F0315_05980 PF07715 TonB-dependent Receptor Plug Domain F0315_05990 PF01177 Asp/Glu/Hydantoin racemase F0315_06040 PF00962 Adenosine/AMP deaminase F0315_06045 PF00990 Diguanylate cyclase, GGDEF domain F0315_06045 PF00563 EAL domain F0315_06045 PF13188 PAS domain F0315_06045 PF03707 Bacterial signalling protein N terminal repeat F0315_06050 PF00072 Response regulator receiver domain F0315_06050 PF00158 Sigma-54 interaction domain F0315_06050 PF02954 Bacterial regulatory protein, Fis family F0315_06055 PF00989 PAS fold F0315_06055 PF00512 His Kinase A (phospho-acceptor) domain F0315_06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_06065 PF00120 Glutamine synthetase, catalytic domain F0315_06065 PF03951 Glutamine synthetase, beta-Grasp domain F0315_06085 PF03631 Virulence factor BrkB F0315_06090 PF02580 D-Tyr-tRNA(Tyr) deacylase F0315_06095 PF00583 Acetyltransferase (GNAT) family F0315_06095 PF09500 Putative thioesterase (yiiD_Cterm) F0315_06105 PF01293 Phosphoenolpyruvate carboxykinase F0315_06110 PF01430 Hsp33 protein F0315_06115 PF01479 S4 domain F0315_06120 PF11356 Type II secretion system protein C F0315_06125 PF03958 Bacterial type II/III secretion system short domain F0315_06125 PF00263 Bacterial type II and III secretion system protein F0315_06130 PF00437 Type II/IV secretion system protein F0315_06135 PF00482 Type II secretion system (T2SS), protein F F0315_06140 PF08334 Type II secretion system (T2SS), protein G F0315_06140 PF07963 Prokaryotic N-terminal methylation motif F0315_06145 PF12019 Type II transport protein GspH F0315_06150 PF02501 Type II secretion system (T2SS), protein I F0315_06150 PF07963 Prokaryotic N-terminal methylation motif F0315_06155 PF11612 Type II secretion system (T2SS), protein J F0315_06155 PF07963 Prokaryotic N-terminal methylation motif F0315_06160 PF03934 Type II secretion system (T2SS), protein K F0315_06165 PF12693 GspL periplasmic domain F0315_06165 PF05134 Type II secretion system (T2SS), protein L F0315_06170 PF04612 Type II secretion system (T2SS), protein M F0315_06175 PF01203 Type II secretion system (T2SS), protein N F0315_06180 PF00459 Inositol monophosphatase family F0315_06185 PF00293 NUDIX domain F0315_06190 PF01521 Iron-sulphur cluster biosynthesis F0315_06190 PF01106 NifU-like domain F0315_06195 PF00156 Phosphoribosyl transferase domain F0315_06200 PF00561 alpha/beta hydrolase fold F0315_06210 PF00575 S1 RNA binding domain F0315_06210 PF17674 HHH domain F0315_06210 PF16921 Tex protein YqgF-like domain F0315_06210 PF09371 Tex-like protein N-terminal domain F0315_06215 PF01272 Transcription elongation factor, GreA/GreB, C-term F0315_06215 PF03449 Transcription elongation factor, N-terminal F0315_06230 PF00005 ABC transporter F0315_06235 PF02653 Branched-chain amino acid transport system / permease component F0315_06240 PF00933 Glycosyl hydrolase family 3 N terminal domain F0315_06240 PF01915 Glycosyl hydrolase family 3 C-terminal domain F0315_06245 PF00990 Diguanylate cyclase, GGDEF domain F0315_06245 PF17152 Periplasmic sensor domain F0315_06250 PF00486 Transcriptional regulatory protein, C terminal F0315_06250 PF00072 Response regulator receiver domain F0315_06255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_06255 PF00672 HAMP domain F0315_06255 PF00512 His Kinase A (phospho-acceptor) domain F0315_06260 PF00271 Helicase conserved C-terminal domain F0315_06260 PF17191 RecG wedge domain F0315_06260 PF00270 DEAD/DEAH box helicase F0315_06265 PF02824 TGS domain F0315_06265 PF13291 ACT domain F0315_06265 PF04607 Region found in RelA / SpoT proteins F0315_06270 PF01192 RNA polymerase Rpb6 F0315_06275 PF00625 Guanylate kinase F0315_06280 PF02592 Putative vitamin uptake transporter F0315_06285 PF00474 Sodium:solute symporter family F0315_06295 PF03471 Transporter associated domain F0315_06295 PF00999 Sodium/hydrogen exchanger family F0315_06295 PF02080 TrkA-C domain F0315_06300 PF00196 Bacterial regulatory proteins, luxR family F0315_06300 PF00072 Response regulator receiver domain F0315_06305 PF11412 Disulphide bond corrector protein DsbC F0315_06305 PF02683 Cytochrome C biogenesis protein transmembrane region F0315_06310 PF03714 Bacterial pullanase-associated domain F0315_06310 PF18494 Pullulanase Ins domain F0315_06310 PF11852 Domain of unknown function (DUF3372) F0315_06310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F0315_06310 PF17967 Pullulanase N2 domain F0315_06315 PF03605 Anaerobic c4-dicarboxylate membrane transporter F0315_06320 PF00206 Lyase F0315_06320 PF10415 Fumarase C C-terminus F0315_06325 PF17158 Membrane-associated sensor, integral membrane domain F0315_06325 PF00990 Diguanylate cyclase, GGDEF domain F0315_06330 PF04186 FxsA cytoplasmic membrane protein F0315_06335 PF00588 SpoU rRNA Methylase family F0315_06340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F0315_06340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F0315_06345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_06345 PF00512 His Kinase A (phospho-acceptor) domain F0315_06345 PF00672 HAMP domain F0315_06345 PF16527 Two-component sensor protein CpxA, periplasmic domain F0315_06350 PF00486 Transcriptional regulatory protein, C terminal F0315_06350 PF00072 Response regulator receiver domain F0315_06360 PF01545 Cation efflux family F0315_06360 PF16916 Dimerisation domain of Zinc Transporter F0315_06365 PF00365 Phosphofructokinase F0315_06370 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F0315_06375 PF06005 Cell division protein ZapB F0315_06380 PF02219 Methylenetetrahydrofolate reductase F0315_06385 PF00696 Amino acid kinase family F0315_06385 PF03447 Homoserine dehydrogenase, NAD binding domain F0315_06385 PF00742 Homoserine dehydrogenase F0315_06390 PF01053 Cys/Met metabolism PLP-dependent enzyme F0315_06395 PF01340 Met Apo-repressor, MetJ F0315_06400 PF00390 Malic enzyme, N-terminal domain F0315_06400 PF03949 Malic enzyme, NAD binding domain F0315_06405 PF01197 Ribosomal protein L31 F0315_06410 PF17764 3′ DNA-binding domain (3′BD) F0315_06410 PF00270 DEAD/DEAH box helicase F0315_06410 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F0315_06410 PF00271 Helicase conserved C-terminal domain F0315_06410 PF18074 Primosomal protein N C-terminal domain F0315_06415 PF00356 Bacterial regulatory proteins, lacI family F0315_06420 PF05036 Sporulation related domain F0315_06425 PF00227 Proteasome subunit F0315_06430 PF07724 AAA domain (Cdc48 subfamily) F0315_06430 PF00004 ATPase family associated with various cellular activities (AAA) F0315_06430 PF10431 C-terminal, D2-small domain, of ClpB protein F0315_06435 PF01040 UbiA prenyltransferase family F0315_06440 PF03737 Aldolase/RraA F0315_06450 PF00121 Triosephosphate isomerase F0315_06470 PF00455 DeoR C terminal sensor domain F0315_06470 PF08220 DeoR-like helix-turn-helix domain F0315_06475 PF00166 Chaperonin 10 Kd subunit F0315_06480 PF00118 TCP-1/cpn60 chaperonin family F0315_06490 PF04055 Radical SAM superfamily F0315_06495 PF01132 Elongation factor P (EF-P) OB domain F0315_06495 PF08207 Elongation factor P (EF-P) KOW-like domain F0315_06495 PF09285 Elongation factor P, C-terminal F0315_06500 PF02313 Fumarate reductase subunit D F0315_06505 PF02300 Fumarate reductase subunit C F0315_06510 PF13085 2Fe-2S iron-sulfur cluster binding domain F0315_06510 PF13183 4Fe-4S dicluster domain F0315_06515 PF00890 FAD binding domain F0315_06515 PF02910 Fumarate reductase flavoprotein C-term F0315_06520 PF00152 tRNA synthetases class II (D, K and N) F0315_06525 PF00581 Rhodanese-like domain F0315_06530 PF02556 Preprotein translocase subunit SecB F0315_06535 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F0315_06535 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F0315_06545 PF06426 Serine acetyltransferase, N-terminal F0315_06545 PF00132 Bacterial transferase hexapeptide (six repeats) F0315_06555 PF00311 Phosphoenolpyruvate carboxylase F0315_06560 PF07687 Peptidase dimerisation domain F0315_06560 PF01546 Peptidase family M20/M25/M40 F0315_06565 PF02774 Semialdehyde dehydrogenase, dimerisation domain F0315_06565 PF01118 Semialdehyde dehydrogenase, NAD binding domain F0315_06570 PF00696 Amino acid kinase family F0315_06575 PF00764 Arginosuccinate synthase F0315_06580 PF00206 Lyase F0315_06580 PF14698 Argininosuccinate lyase C-terminal F0315_06590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0315_06590 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_06595 PF08534 Redoxin F0315_06595 PF00462 Glutaredoxin F0315_06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_06600 PF03466 LysR substrate binding domain F0315_06605 PF17092 Penicillin-binding protein OB-like domain F0315_06605 PF00905 Penicillin binding protein transpeptidase domain F0315_06605 PF00912 Transglycosylase F0315_06630 PF07660 Secretin and TonB N terminus short domain F0315_06630 PF03958 Bacterial type II/III secretion system short domain F0315_06630 PF00263 Bacterial type II and III secretion system protein F0315_06630 PF11741 AMIN domain F0315_06635 PF01202 Shikimate kinase F0315_06640 PF01761 3-dehydroquinate synthase F0315_06650 PF02086 D12 class N6 adenine-specific DNA methyltransferase F0315_06655 PF00834 Ribulose-phosphate 3 epimerase family F0315_06660 PF13419 Haloacid dehalogenase-like hydrolase F0315_06665 PF00579 tRNA synthetases class I (W and Y) F0315_06680 PF00919 Uncharacterized protein family UPF0004 F0315_06680 PF04055 Radical SAM superfamily F0315_06680 PF18693 TRAM domain F0315_06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_06690 PF00117 Glutamine amidotransferase class-I F0315_06695 PF00202 Aminotransferase class-III F0315_06700 PF04958 Arginine N-succinyltransferase beta subunit F0315_06705 PF00171 Aldehyde dehydrogenase family F0315_06715 PF13545 Crp-like helix-turn-helix domain F0315_06715 PF00027 Cyclic nucleotide-binding domain F0315_06720 PF00485 Phosphoribulokinase / Uridine kinase family F0315_06725 PF06794 Uncharacterised protein family (UPF0270) F0315_06730 PF00561 alpha/beta hydrolase fold F0315_06740 PF00005 ABC transporter F0315_06740 PF12848 ABC transporter F0315_06745 PF02525 Flavodoxin-like fold F0315_06750 PF00999 Sodium/hydrogen exchanger family F0315_06750 PF02254 TrkA-N domain F0315_06760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0315_06765 PF01112 Asparaginase F0315_06770 PF00709 Adenylosuccinate synthetase F0315_06780 PF08238 Sel1 repeat F0315_06785 PF11893 Domain of unknown function (DUF3413) F0315_06785 PF00884 Sulfatase F0315_06790 PF00773 RNB domain F0315_06790 PF08461 Ribonuclease R winged-helix domain F0315_06790 PF17876 Cold shock domain F0315_06790 PF00575 S1 RNA binding domain F0315_06790 PF08206 Ribonuclease B OB domain F0315_06795 PF08032 RNA 2'-O ribose methyltransferase substrate binding F0315_06795 PF00588 SpoU rRNA Methylase family F0315_06800 PF00338 Ribosomal protein S10p/S20e F0315_06805 PF00297 Ribosomal protein L3 F0315_06810 PF00573 Ribosomal protein L4/L1 family F0315_06815 PF00276 Ribosomal protein L23 F0315_06820 PF00181 Ribosomal Proteins L2, RNA binding domain F0315_06820 PF03947 Ribosomal Proteins L2, C-terminal domain F0315_06825 PF00203 Ribosomal protein S19 F0315_06830 PF00237 Ribosomal protein L22p/L17e F0315_06835 PF07650 KH domain F0315_06835 PF00189 Ribosomal protein S3, C-terminal domain F0315_06840 PF00252 Ribosomal protein L16p/L10e F0315_06845 PF00831 Ribosomal L29 protein F0315_06850 PF00366 Ribosomal protein S17 F0315_06855 PF00238 Ribosomal protein L14p/L23e F0315_06860 PF00467 KOW motif F0315_06860 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F0315_06865 PF00281 Ribosomal protein L5 F0315_06865 PF00673 ribosomal L5P family C-terminus F0315_06870 PF00253 Ribosomal protein S14p/S29e F0315_06875 PF00410 Ribosomal protein S8 F0315_06880 PF00347 Ribosomal protein L6 F0315_06885 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F0315_06890 PF00333 Ribosomal protein S5, N-terminal domain F0315_06890 PF03719 Ribosomal protein S5, C-terminal domain F0315_06895 PF00327 Ribosomal protein L30p/L7e F0315_06900 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F0315_06905 PF00344 SecY translocase F0315_06910 PF00444 Ribosomal protein L36 F0315_06915 PF00416 Ribosomal protein S13/S18 F0315_06920 PF00411 Ribosomal protein S11 F0315_06925 PF00163 Ribosomal protein S4/S9 N-terminal domain F0315_06925 PF01479 S4 domain F0315_06930 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F0315_06930 PF01000 RNA polymerase Rpb3/RpoA insert domain F0315_06930 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F0315_06935 PF01196 Ribosomal protein L17 F0315_06945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0315_06945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F0315_06950 PF04225 Opacity-associated protein A LysM-like domain F0315_06950 PF08525 Opacity-associated protein A N-terminal motif F0315_06955 PF00892 EamA-like transporter family F0315_06960 PF13673 Acetyltransferase (GNAT) domain F0315_06965 PF00271 Helicase conserved C-terminal domain F0315_06965 PF03880 DbpA RNA binding domain F0315_06965 PF00270 DEAD/DEAH box helicase F0315_06975 PF00149 Calcineurin-like phosphoesterase F0315_06975 PF02872 5'-nucleotidase, C-terminal domain F0315_06980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0315_06980 PF14824 Sirohaem biosynthesis protein central F0315_06980 PF10414 Sirohaem synthase dimerisation region F0315_06985 PF01507 Phosphoadenosine phosphosulfate reductase family F0315_06990 PF00009 Elongation factor Tu GTP binding domain F0315_07015 PF12704 MacB-like periplasmic core domain F0315_07015 PF00005 ABC transporter F0315_07015 PF02687 FtsX-like permease family F0315_07025 PF10795 Protein of unknown function (DUF2607) F0315_07030 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) F0315_07035 PF01625 Peptide methionine sulfoxide reductase F0315_07040 PF01103 Surface antigen F0315_07040 PF07244 Surface antigen variable number repeat F0315_07040 PF17243 POTRA domain TamA domain 1 F0315_07045 PF04357 TamB, inner membrane protein subunit of TAM complex F0315_07050 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like F0315_07055 PF00719 Inorganic pyrophosphatase F0315_07060 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F0315_07070 PF01225 Mur ligase family, catalytic domain F0315_07070 PF08245 Mur ligase middle domain F0315_07070 PF02875 Mur ligase family, glutamate ligase domain F0315_07075 PF02441 Flavoprotein F0315_07085 PF00528 Binding-protein-dependent transport system inner membrane component F0315_07090 PF00005 ABC transporter F0315_07095 PF04751 Protein of unknown function (DUF615) F0315_07100 PF01523 Putative modulator of DNA gyrase F0315_07105 PF01769 Divalent cation transporter F0315_07105 PF03448 MgtE intracellular N domain F0315_07105 PF00571 CBS domain F0315_07110 PF00381 PTS HPr component phosphorylation site F0315_07115 PF03668 P-loop ATPase protein family F0315_07120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0315_07125 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F0315_07130 PF00309 Sigma-54 factor, Activator interacting domain (AID) F0315_07130 PF04552 Sigma-54, DNA binding domain F0315_07130 PF04963 Sigma-54 factor, core binding domain F0315_07135 PF00005 ABC transporter F0315_07135 PF12399 Branched-chain amino acid ATP-binding cassette transporter F0315_07140 PF03968 OstA-like protein F0315_07155 PF00571 CBS domain F0315_07155 PF01380 SIS domain F0315_07160 PF01699 Sodium/calcium exchanger protein F0315_07170 PF00005 ABC transporter F0315_07175 PF02405 Permease MlaE F0315_07180 PF02470 MlaD protein F0315_07185 PF05494 MlaC protein F0315_07195 PF01722 BolA-like protein F0315_07200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F0315_07205 PF01553 Acyltransferase F0315_07210 PF01042 Endoribonuclease L-PSP F0315_07215 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain F0315_07215 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain F0315_07220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F0315_07220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F0315_07225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F0315_07225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F0315_07230 PF13638 PIN domain F0315_07230 PF02562 PhoH-like protein F0315_07240 PF12137 RNA polymerase recycling family C-terminal F0315_07240 PF00271 Helicase conserved C-terminal domain F0315_07240 PF18339 RapA N-terminal Tudor like domain 1 F0315_07240 PF00176 SNF2 family N-terminal domain F0315_07240 PF18337 RapA N-terminal Tudor like domain F0315_07245 PF00849 RNA pseudouridylate synthase F0315_07250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0315_07250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0315_07255 PF05987 Bacterial protein of unknown function (DUF898) F0315_07265 PF10458 Valyl tRNA synthetase tRNA binding arm F0315_07265 PF00133 tRNA synthetases class I (I, L, M and V) F0315_07265 PF08264 Anticodon-binding domain of tRNA F0315_07270 PF04364 DNA polymerase III chi subunit, HolC F0315_07275 PF00883 Cytosol aminopeptidase family, catalytic domain F0315_07275 PF02789 Cytosol aminopeptidase family, N-terminal domain F0315_07280 PF03739 Lipopolysaccharide export system permease LptF/LptG F0315_07285 PF03739 Lipopolysaccharide export system permease LptF/LptG F0315_07300 PF00072 Response regulator receiver domain F0315_07340 PF00694 Aconitase C-terminal domain F0315_07345 PF00330 Aconitase family (aconitate hydratase) F0315_07350 PF00180 Isocitrate/isopropylmalate dehydrogenase F0315_07355 PF08502 LeuA allosteric (dimerisation) domain F0315_07355 PF00682 HMGL-like F0315_07365 PF01569 PAP2 superfamily F0315_07375 PF03466 LysR substrate binding domain F0315_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_07380 PF00501 AMP-binding enzyme F0315_07385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0315_07385 PF00205 Thiamine pyrophosphate enzyme, central domain F0315_07385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0315_07390 PF10369 Small subunit of acetolactate synthase F0315_07395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0315_07395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0315_07395 PF01842 ACT domain F0315_07400 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F0315_07405 PF01812 5-formyltetrahydrofolate cyclo-ligase family F0315_07415 PF05164 Cell division protein ZapA F0315_07420 PF03695 Uncharacterised protein family (UPF0149) F0315_07425 PF01494 FAD binding domain F0315_07430 PF01494 FAD binding domain F0315_07445 PF03937 Flavinator of succinate dehydrogenase F0315_07455 PF00890 FAD binding domain F0315_07455 PF02910 Fumarate reductase flavoprotein C-term F0315_07465 PF08281 Sigma-70, region 4 F0315_07465 PF04542 Sigma-70 region 2 F0315_07470 PF03873 Anti sigma-E protein RseA, C-terminal domain F0315_07470 PF03872 Anti sigma-E protein RseA, N-terminal domain F0315_07475 PF03888 MucB/RseB N-terminal domain F0315_07475 PF17188 MucB/RseB C-terminal domain F0315_07485 PF00679 Elongation factor G C-terminus F0315_07485 PF00009 Elongation factor Tu GTP binding domain F0315_07485 PF03144 Elongation factor Tu domain 2 F0315_07485 PF06421 GTP-binding protein LepA C-terminus F0315_07490 PF10502 Signal peptidase, peptidase S26 F0315_07495 PF00035 Double-stranded RNA binding motif F0315_07495 PF14622 Ribonuclease-III-like F0315_07500 PF07650 KH domain F0315_07500 PF01926 50S ribosome-binding GTPase F0315_07505 PF02565 Recombination protein O C terminal F0315_07505 PF11967 Recombination protein O N terminal F0315_07510 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F0315_07515 PF01648 4'-phosphopantetheinyl transferase superfamily F0315_07530 PF00990 Diguanylate cyclase, GGDEF domain F0315_07535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F0315_07535 PF00072 Response regulator receiver domain F0315_07535 PF00512 His Kinase A (phospho-acceptor) domain F0315_07535 PF00672 HAMP domain F0315_07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_07535 PF01627 Hpt domain F0315_07540 PF05958 tRNA (Uracil-5-)-methyltransferase F0315_07540 PF01938 TRAM domain F0315_07545 PF02824 TGS domain F0315_07545 PF04607 Region found in RelA / SpoT proteins F0315_07545 PF13291 ACT domain F0315_07550 PF03819 MazG nucleotide pyrophosphohydrolase domain F0315_07555 PF00117 Glutamine amidotransferase class-I F0315_07555 PF06418 CTP synthase N-terminus F0315_07560 PF00113 Enolase, C-terminal TIM barrel domain F0315_07560 PF03952 Enolase, N-terminal domain F0315_07565 PF12627 Probable RNA and SrmB- binding site of polymerase A F0315_07565 PF01966 HD domain F0315_07565 PF01743 Poly A polymerase head domain F0315_07570 PF01471 Putative peptidoglycan binding domain F0315_07570 PF13401 AAA domain F0315_07580 PF08239 Bacterial SH3 domain F0315_07585 PF01384 Phosphate transporter family F0315_07590 PF01865 Protein of unknown function DUF47 F0315_07595 PF01928 CYTH domain F0315_07600 PF07885 Ion channel F0315_07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_07605 PF00672 HAMP domain F0315_07610 PF08335 GlnD PII-uridylyltransferase F0315_07610 PF03710 Glutamate-ammonia ligase adenylyltransferase F0315_07615 PF01467 Cytidylyltransferase-like F0315_07615 PF00294 pfkB family carbohydrate kinase F0315_07620 PF02321 Outer membrane efflux protein F0315_07625 PF00293 NUDIX domain F0315_07630 PF06853 Protein of unknown function (DUF1249) F0315_07635 PF00149 Calcineurin-like phosphoesterase F0315_07640 PF05728 Uncharacterised protein family (UPF0227) F0315_07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_07645 PF00986 DNA gyrase B subunit, carboxyl terminus F0315_07645 PF01751 Toprim domain F0315_07645 PF00204 DNA gyrase B F0315_07650 PF00521 DNA gyrase/topoisomerase IV, subunit A F0315_07650 PF03989 DNA gyrase C-terminal domain, beta-propeller F0315_07655 PF03884 DNA gyrase inhibitor YacG F0315_07660 PF07072 Cell division protein F0315_07665 PF01121 Dephospho-CoA kinase F0315_07670 PF01478 Type IV leader peptidase family F0315_07670 PF06750 Bacterial Peptidase A24 N-terminal domain F0315_07675 PF00482 Type II secretion system (T2SS), protein F F0315_07680 PF00437 Type II/IV secretion system protein F0315_07680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F0315_07685 PF00114 Pilin (bacterial filament) F0315_07685 PF07963 Prokaryotic N-terminal methylation motif F0315_07690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F0315_07690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F0315_07695 PF01510 N-acetylmuramoyl-L-alanine amidase F0315_07700 PF00258 Flavodoxin F0315_07705 PF00589 Phage integrase family F0315_07705 PF02899 Phage integrase, N-terminal SAM-like domain F0315_07710 PF13098 Thioredoxin-like domain F0315_07710 PF10411 Disulfide bond isomerase protein N-terminus F0315_07715 PF01368 DHH family F0315_07715 PF02272 DHHA1 domain F0315_07715 PF17768 RecJ OB domain F0315_07720 PF00149 Calcineurin-like phosphoesterase F0315_07720 PF02872 5'-nucleotidase, C-terminal domain F0315_07730 PF00392 Bacterial regulatory proteins, gntR family F0315_07730 PF07729 FCD domain F0315_07735 PF00456 Transketolase, thiamine diphosphate binding domain F0315_07735 PF17831 Pyruvate dehydrogenase E1 component middle domain F0315_07740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F0315_07740 PF00364 Biotin-requiring enzyme F0315_07740 PF02817 e3 binding domain F0315_07745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0315_07745 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_07755 PF01795 MraW methylase family F0315_07760 PF04999 Cell division protein FtsL F0315_07765 PF03717 Penicillin-binding Protein dimerisation domain F0315_07765 PF00905 Penicillin binding protein transpeptidase domain F0315_07770 PF08245 Mur ligase middle domain F0315_07770 PF01225 Mur ligase family, catalytic domain F0315_07770 PF02875 Mur ligase family, glutamate ligase domain F0315_07775 PF01225 Mur ligase family, catalytic domain F0315_07775 PF08245 Mur ligase middle domain F0315_07775 PF02875 Mur ligase family, glutamate ligase domain F0315_07780 PF00953 Glycosyl transferase family 4 F0315_07780 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F0315_07785 PF08245 Mur ligase middle domain F0315_07785 PF02875 Mur ligase family, glutamate ligase domain F0315_07790 PF01098 Cell cycle protein F0315_07795 PF04101 Glycosyltransferase family 28 C-terminal domain F0315_07795 PF03033 Glycosyltransferase family 28 N-terminal domain F0315_07800 PF08245 Mur ligase middle domain F0315_07800 PF02875 Mur ligase family, glutamate ligase domain F0315_07800 PF01225 Mur ligase family, catalytic domain F0315_07805 PF03799 Cell division protein FtsQ F0315_07805 PF08478 POTRA domain, FtsQ-type F0315_07810 PF02491 SHS2 domain inserted in FTSA F0315_07815 PF00091 Tubulin/FtsZ family, GTPase domain F0315_07815 PF12327 FtsZ family, C-terminal domain F0315_07820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F0315_07830 PF02810 SEC-C motif F0315_07830 PF01043 SecA preprotein cross-linking domain F0315_07830 PF07517 SecA DEAD-like domain F0315_07830 PF07516 SecA Wing and Scaffold domain F0315_07835 PF00293 NUDIX domain F0315_07840 PF01113 Dihydrodipicolinate reductase, N-terminus F0315_07840 PF05173 Dihydrodipicolinate reductase, C-terminus F0315_07850 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F0315_07850 PF00117 Glutamine amidotransferase class-I F0315_07855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F0315_07855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F0315_07855 PF02142 MGS-like domain F0315_07875 PF01925 Sulfite exporter TauE/SafE F0315_07880 PF03466 LysR substrate binding domain F0315_07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_07885 PF03458 UPF0126 domain F0315_07890 PF01497 Periplasmic binding protein F0315_07900 PF01048 Phosphorylase superfamily F0315_07910 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_07910 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F0315_07915 PF01645 Conserved region in glutamate synthase F0315_07915 PF00310 Glutamine amidotransferases class-II F0315_07915 PF04898 Glutamate synthase central domain F0315_07915 PF01493 GXGXG motif F0315_07920 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_07920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F0315_07925 PF01493 GXGXG motif F0315_07925 PF04898 Glutamate synthase central domain F0315_07925 PF01645 Conserved region in glutamate synthase F0315_07925 PF00310 Glutamine amidotransferases class-II F0315_07930 PF04055 Radical SAM superfamily F0315_07930 PF16199 Radical_SAM C-terminal domain F0315_07935 PF00360 Phytochrome region F0315_07935 PF00563 EAL domain F0315_07935 PF01590 GAF domain F0315_07935 PF00990 Diguanylate cyclase, GGDEF domain F0315_07940 PF00512 His Kinase A (phospho-acceptor) domain F0315_07940 PF18415 Histidine kinase receptor ArcB trans-membrane domain F0315_07940 PF00989 PAS fold F0315_07940 PF00072 Response regulator receiver domain F0315_07940 PF01627 Hpt domain F0315_07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_07945 PF00072 Response regulator receiver domain F0315_07945 PF00486 Transcriptional regulatory protein, C terminal F0315_07955 PF03737 Aldolase/RraA F0315_07970 PF00696 Amino acid kinase family F0315_07970 PF01842 ACT domain F0315_07970 PF00742 Homoserine dehydrogenase F0315_07970 PF03447 Homoserine dehydrogenase, NAD binding domain F0315_07970 PF13840 ACT domain F0315_07975 PF08544 GHMP kinases C terminal F0315_07975 PF00288 GHMP kinases N terminal domain F0315_07980 PF14821 Threonine synthase N terminus F0315_07980 PF00291 Pyridoxal-phosphate dependent enzyme F0315_08020 PF01228 Glycine radical F0315_08030 PF01261 Xylose isomerase-like TIM barrel F0315_08035 PF03167 Uracil DNA glycosylase superfamily F0315_08050 PF01235 Sodium:alanine symporter family F0315_08060 PF01348 Type II intron maturase F0315_08060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F0315_08070 PF03883 Peroxide stress protein YaaA F0315_08075 PF01026 TatD related DNase F0315_08080 PF07670 Nucleoside recognition F0315_08080 PF01773 Na+ dependent nucleoside transporter N-terminus F0315_08080 PF07662 Na+ dependent nucleoside transporter C-terminus F0315_08090 PF01791 DeoC/LacD family aldolase F0315_08095 PF02885 Glycosyl transferase family, helical bundle domain F0315_08095 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F0315_08095 PF00591 Glycosyl transferase family, a/b domain F0315_08100 PF01676 Metalloenzyme superfamily F0315_08105 PF01048 Phosphorylase superfamily F0315_08115 PF18429 Domain of unknown function (DUF5609) F0315_08125 PF18073 Rubredoxin metal binding domain F0315_08130 PF14492 Elongation Factor G, domain II F0315_08130 PF00679 Elongation factor G C-terminus F0315_08130 PF03144 Elongation factor Tu domain 2 F0315_08130 PF03764 Elongation factor G, domain IV F0315_08130 PF00009 Elongation factor Tu GTP binding domain F0315_08135 PF00501 AMP-binding enzyme F0315_08140 PF00072 Response regulator receiver domain F0315_08150 PF02929 Beta galactosidase small chain F0315_08150 PF02837 Glycosyl hydrolases family 2, sugar binding domain F0315_08150 PF00703 Glycosyl hydrolases family 2 F0315_08150 PF16353 Domain of unknown function(DUF4981) F0315_08150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F0315_08155 PF00356 Bacterial regulatory proteins, lacI family F0315_08160 PF01588 Putative tRNA binding domain F0315_08170 PF01544 CorA-like Mg2+ transporter protein F0315_08175 PF08443 RimK-like ATP-grasp domain F0315_08175 PF02080 TrkA-C domain F0315_08175 PF18030 RimK PreATP-grasp domain F0315_08180 PF00583 Acetyltransferase (GNAT) family F0315_08190 PF14602 Hexapeptide repeat of succinyl-transferase F0315_08190 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle F0315_08200 PF07130 YebG protein F0315_08215 PF17946 RecC C-terminal domain F0315_08220 PF00580 UvrD/REP helicase N-terminal domain F0315_08220 PF13361 UvrD-like helicase C-terminal domain F0315_08220 PF12705 PD-(D/E)XK nuclease superfamily F0315_08225 PF13538 UvrD-like helicase C-terminal domain F0315_08240 PF00583 Acetyltransferase (GNAT) family F0315_08240 PF00696 Amino acid kinase family F0315_08250 PF03562 MltA specific insert domain F0315_08250 PF06725 3D domain F0315_08255 PF00899 ThiF family F0315_08260 PF02657 Fe-S metabolism associated domain F0315_08265 PF00266 Aminotransferase class-V F0315_08270 PF01965 DJ-1/PfpI family F0315_08275 PF02558 Ketopantoate reductase PanE/ApbA F0315_08275 PF08546 Ketopantoate reductase PanE/ApbA C terminal F0315_08280 PF03502 Nucleoside-specific channel-forming protein, Tsx F0315_08290 PF04542 Sigma-70 region 2 F0315_08290 PF04545 Sigma-70, region 4 F0315_08300 PF07690 Major Facilitator Superfamily F0315_08310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F0315_08320 PF05175 Methyltransferase small domain F0315_08325 PF01722 BolA-like protein F0315_08330 PF11973 NQRA C-terminal domain F0315_08330 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) F0315_08335 PF03116 NQR2, RnfD, RnfE family F0315_08340 PF04205 FMN-binding domain F0315_08345 PF02508 Rnf-Nqr subunit, membrane protein F0315_08350 PF02508 Rnf-Nqr subunit, membrane protein F0315_08355 PF00970 Oxidoreductase FAD-binding domain F0315_08355 PF00111 2Fe-2S iron-sulfur cluster binding domain F0315_08355 PF00175 Oxidoreductase NAD-binding domain F0315_08360 PF02424 ApbE family F0315_08370 PF00817 impB/mucB/samB family F0315_08370 PF11798 IMS family HHH motif F0315_08380 PF00990 Diguanylate cyclase, GGDEF domain F0315_08380 PF17158 Membrane-associated sensor, integral membrane domain F0315_08385 PF00209 Sodium:neurotransmitter symporter family F0315_08395 PF08443 RimK-like ATP-grasp domain F0315_08395 PF18030 RimK PreATP-grasp domain F0315_08400 PF18030 RimK PreATP-grasp domain F0315_08400 PF08443 RimK-like ATP-grasp domain F0315_08405 PF01546 Peptidase family M20/M25/M40 F0315_08405 PF07687 Peptidase dimerisation domain F0315_08410 PF00860 Permease family F0315_08415 PF00156 Phosphoribosyl transferase domain F0315_08425 PF07417 Sigma factor-binding transcriptional regulator Crl F0315_08430 PF00696 Amino acid kinase family F0315_08430 PF01472 PUA domain F0315_08435 PF00171 Aldehyde dehydrogenase family F0315_08440 PF03477 ATP cone domain F0315_08445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F0315_08445 PF01872 RibD C-terminal domain F0315_08450 PF00677 Lumazine binding domain F0315_08455 PF00925 GTP cyclohydrolase II F0315_08455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F0315_08460 PF00885 6,7-dimethyl-8-ribityllumazine synthase F0315_08465 PF01029 NusB family F0315_08470 PF00586 AIR synthase related protein, N-terminal domain F0315_08470 PF02769 AIR synthase related protein, C-terminal domain F0315_08475 PF04608 Phosphatidylglycerophosphatase A F0315_08480 PF11944 Protein of unknown function (DUF3461) F0315_08485 PF08335 GlnD PII-uridylyltransferase F0315_08485 PF01966 HD domain F0315_08485 PF01909 Nucleotidyltransferase domain F0315_08490 PF00557 Metallopeptidase family M24 F0315_08495 PF00318 Ribosomal protein S2 F0315_08500 PF00889 Elongation factor TS F0315_08505 PF00696 Amino acid kinase family F0315_08510 PF01765 Ribosome recycling factor F0315_08515 PF01255 Putative undecaprenyl diphosphate synthase F0315_08525 PF13288 DXP reductoisomerase C-terminal domain F0315_08525 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F0315_08525 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F0315_08530 PF02163 Peptidase family M50 F0315_08530 PF17820 PDZ domain F0315_08535 PF01103 Surface antigen F0315_08535 PF07244 Surface antigen variable number repeat F0315_08540 PF03938 Outer membrane protein (OmpH-like) F0315_08545 PF00132 Bacterial transferase hexapeptide (six repeats) F0315_08545 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F0315_08550 PF07977 FabA-like domain F0315_08555 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F0315_08555 PF00132 Bacterial transferase hexapeptide (six repeats) F0315_08560 PF02684 Lipid-A-disaccharide synthetase F0315_08565 PF01351 Ribonuclease HII F0315_08570 PF02811 PHP domain F0315_08570 PF07733 Bacterial DNA polymerase III alpha NTPase domain F0315_08570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F0315_08570 PF14579 Helix-hairpin-helix motif F0315_08570 PF01336 OB-fold nucleic acid binding domain F0315_08575 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F0315_08580 PF09179 TilS substrate binding domain F0315_08580 PF11734 TilS substrate C-terminal domain F0315_08580 PF01171 PP-loop family F0315_08585 PF00034 Cytochrome c F0315_08590 PF00543 Nitrogen regulatory protein P-II F0315_08595 PF03372 Endonuclease/Exonuclease/phosphatase family F0315_08600 PF01476 LysM domain F0315_08600 PF01464 Transglycosylase SLT domain F0315_08605 PF00753 Metallo-beta-lactamase superfamily F0315_08605 PF16123 Hydroxyacylglutathione hydrolase C-terminus F0315_08610 PF08241 Methyltransferase domain F0315_08615 PF00075 RNase H F0315_08620 PF00929 Exonuclease F0315_08630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F0315_08630 PF02770 Acyl-CoA dehydrogenase, middle domain F0315_08630 PF09317 Domain of unknown function (DUF1974) F0315_08630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F0315_08635 PF13580 SIS domain F0315_08640 PF13230 Glutamine amidotransferases class-II F0315_08645 PF00551 Formyl transferase F0315_08650 PF00586 AIR synthase related protein, N-terminal domain F0315_08650 PF02769 AIR synthase related protein, C-terminal domain F0315_08660 PF01479 S4 domain F0315_08660 PF00849 RNA pseudouridylate synthase F0315_08665 PF01713 Smr domain F0315_08685 PF00728 Glycosyl hydrolase family 20, catalytic domain F0315_08685 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain F0315_08685 PF02838 Glycosyl hydrolase family 20, domain 2 F0315_08685 PF03173 Putative carbohydrate binding domain F0315_08695 PF00403 Heavy-metal-associated domain F0315_08700 PF00749 tRNA synthetases class I (E and Q), catalytic domain F0315_08705 PF01389 OmpA-like transmembrane domain F0315_08705 PF00691 OmpA family F0315_08720 PF08021 Siderophore-interacting FAD-binding domain F0315_08720 PF04954 Siderophore-interacting protein F0315_08760 PF00072 Response regulator receiver domain F0315_08760 PF01584 CheW-like domain F0315_08765 PF03705 CheR methyltransferase, all-alpha domain F0315_08765 PF01739 CheR methyltransferase, SAM binding domain F0315_08770 PF00460 Flagella basal body rod protein F0315_08775 PF00460 Flagella basal body rod protein F0315_08775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0315_08780 PF13861 FlgD Tudor-like domain F0315_08780 PF13860 FlgD Ig-like domain F0315_08780 PF03963 Flagellar hook capping protein - N-terminal region F0315_08785 PF00460 Flagella basal body rod protein F0315_08785 PF07559 Flagellar basal body protein FlaE F0315_08785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0315_08790 PF00460 Flagella basal body rod protein F0315_08790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0315_08795 PF00460 Flagella basal body rod protein F0315_08795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0315_08800 PF02107 Flagellar L-ring protein F0315_08805 PF02119 Flagellar P-ring protein F0315_08810 PF10135 Rod binding protein F0315_08810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F0315_08815 PF07196 Flagellin hook IN motif F0315_08815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F0315_08825 PF07196 Flagellin hook IN motif F0315_08825 PF00700 Bacterial flagellin C-terminal helical region F0315_08825 PF00669 Bacterial flagellin N-terminal helical region F0315_08830 PF00669 Bacterial flagellin N-terminal helical region F0315_08830 PF07196 Flagellin hook IN motif F0315_08830 PF00700 Bacterial flagellin C-terminal helical region F0315_08915 PF06071 Protein of unknown function (DUF933) F0315_08915 PF01926 50S ribosome-binding GTPase F0315_08920 PF01195 Peptidyl-tRNA hydrolase F0315_08925 PF14572 Phosphoribosyl synthetase-associated domain F0315_08925 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F0315_08930 PF08544 GHMP kinases C terminal F0315_08930 PF00288 GHMP kinases N terminal domain F0315_08935 PF03550 Outer membrane lipoprotein LolB F0315_08940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F0315_08940 PF01488 Shikimate / quinate 5-dehydrogenase F0315_08940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F0315_08945 PF03462 PCRF domain F0315_08945 PF00472 RF-1 domain F0315_08950 PF13847 Methyltransferase domain F0315_08950 PF17827 PrmC N-terminal domain F0315_08955 PF04247 Invasion gene expression up-regulator, SirB F0315_08960 PF13369 Transglutaminase-like superfamily F0315_08965 PF00793 DAHP synthetase I family F0315_08970 PF02872 5'-nucleotidase, C-terminal domain F0315_08970 PF00149 Calcineurin-like phosphoesterase F0315_08975 PF04073 Aminoacyl-tRNA editing domain F0315_08980 PF00860 Permease family F0315_08995 PF03358 NADPH-dependent FMN reductase F0315_09000 PF03960 ArsC family F0315_09005 PF13181 Tetratricopeptide repeat F0315_09005 PF01435 Peptidase family M48 F0315_09015 PF01594 AI-2E family transporter F0315_09020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_09020 PF02743 Cache domain F0315_09020 PF00672 HAMP domain F0315_09025 PF00578 AhpC/TSA family F0315_09035 PF00701 Dihydrodipicolinate synthetase family F0315_09040 PF06804 NlpB/DapX lipoprotein F0315_09050 PF02557 D-alanyl-D-alanine carboxypeptidase F0315_09055 PF01546 Peptidase family M20/M25/M40 F0315_09055 PF07687 Peptidase dimerisation domain F0315_09060 PF03960 ArsC family F0315_09075 PF11143 Protein of unknown function (DUF2919) F0315_09080 PF04261 Dyp-type peroxidase family F0315_09085 PF00700 Bacterial flagellin C-terminal helical region F0315_09085 PF07196 Flagellin hook IN motif F0315_09085 PF00669 Bacterial flagellin N-terminal helical region F0315_09090 PF00669 Bacterial flagellin N-terminal helical region F0315_09090 PF07196 Flagellin hook IN motif F0315_09090 PF00700 Bacterial flagellin C-terminal helical region F0315_09095 PF00700 Bacterial flagellin C-terminal helical region F0315_09095 PF07196 Flagellin hook IN motif F0315_09095 PF00669 Bacterial flagellin N-terminal helical region F0315_09100 PF03646 FlaG protein F0315_09105 PF07196 Flagellin hook IN motif F0315_09105 PF07195 Flagellar hook-associated protein 2 C-terminus F0315_09105 PF02465 Flagellar hook-associated protein 2 N-terminus F0315_09115 PF02561 Flagellar protein FliS F0315_09120 PF00072 Response regulator receiver domain F0315_09120 PF02954 Bacterial regulatory protein, Fis family F0315_09120 PF00158 Sigma-54 interaction domain F0315_09125 PF00989 PAS fold F0315_09125 PF13426 PAS domain F0315_09125 PF00512 His Kinase A (phospho-acceptor) domain F0315_09125 PF13493 Domain of unknown function (DUF4118) F0315_09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_09125 PF08447 PAS fold F0315_09130 PF02954 Bacterial regulatory protein, Fis family F0315_09130 PF00158 Sigma-54 interaction domain F0315_09130 PF00072 Response regulator receiver domain F0315_09135 PF02049 Flagellar hook-basal body complex protein FliE F0315_09140 PF08345 Flagellar M-ring protein C-terminal F0315_09140 PF01514 Secretory protein of YscJ/FliF family F0315_09145 PF01706 FliG C-terminal domain F0315_09145 PF14841 FliG middle domain F0315_09145 PF14842 FliG N-terminal domain F0315_09150 PF02108 Flagellar assembly protein FliH F0315_09155 PF18269 T3SS EscN ATPase C-terminal domain F0315_09155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F0315_09175 PF03748 Flagellar basal body-associated protein FliL F0315_09180 PF02154 Flagellar motor switch protein FliM F0315_09180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F0315_09185 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F0315_09190 PF04347 Flagellar biosynthesis protein, FliO F0315_09195 PF00813 FliP family F0315_09200 PF01313 Bacterial export proteins, family 3 F0315_09205 PF01311 Bacterial export proteins, family 1 F0315_09210 PF01312 FlhB HrpN YscU SpaS Family F0315_09215 PF01713 Smr domain F0315_09220 PF05175 Methyltransferase small domain F0315_09225 PF01264 Chorismate synthase F0315_09230 PF03458 UPF0126 domain F0315_09235 PF04315 Elongation factor P hydroxylase F0315_09240 PF08891 YfcL protein F0315_09245 PF03358 NADPH-dependent FMN reductase F0315_09250 PF01266 FAD dependent oxidoreductase F0315_09250 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F0315_09255 PF00109 Beta-ketoacyl synthase, N-terminal domain F0315_09255 PF02801 Beta-ketoacyl synthase, C-terminal domain F0315_09260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0315_09260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0315_09260 PF11890 Domain of unknown function (DUF3410) F0315_09265 PF02774 Semialdehyde dehydrogenase, dimerisation domain F0315_09265 PF01118 Semialdehyde dehydrogenase, NAD binding domain F0315_09270 PF01475 Ferric uptake regulator family F0315_09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_09280 PF03466 LysR substrate binding domain F0315_09285 PF03788 LrgA family F0315_09290 PF04172 LrgB-like family F0315_09295 PF00258 Flavodoxin F0315_09305 PF12697 Alpha/beta hydrolase family F0315_09310 PF17206 SeqA protein N-terminal domain F0315_09310 PF03925 SeqA protein C-terminal domain F0315_09315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F0315_09315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F0315_09315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F0315_09315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F0315_09325 PF01784 NIF3 (NGG1p interacting factor 3) F0315_09330 PF00285 Citrate synthase, C-terminal domain F0315_09335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F0315_09340 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F0315_09345 PF02910 Fumarate reductase flavoprotein C-term F0315_09345 PF00890 FAD binding domain F0315_09350 PF13085 2Fe-2S iron-sulfur cluster binding domain F0315_09355 PF02779 Transketolase, pyrimidine binding domain F0315_09355 PF00676 Dehydrogenase E1 component F0315_09355 PF16870 2-oxoglutarate dehydrogenase C-terminal F0315_09355 PF16078 2-oxoglutarate dehydrogenase N-terminus F0315_09360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F0315_09360 PF00364 Biotin-requiring enzyme F0315_09360 PF02817 e3 binding domain F0315_09365 PF08442 ATP-grasp domain F0315_09365 PF00549 CoA-ligase F0315_09370 PF02629 CoA binding domain F0315_09370 PF00549 CoA-ligase F0315_09375 PF00950 ABC 3 transport family F0315_09380 PF00005 ABC transporter F0315_09385 PF01297 Zinc-uptake complex component A periplasmic F0315_09390 PF12833 Helix-turn-helix domain F0315_09390 PF02311 AraC-like ligand binding domain F0315_09395 PF04023 FeoA domain F0315_09400 PF07670 Nucleoside recognition F0315_09400 PF07664 Ferrous iron transport protein B C terminus F0315_09400 PF02421 Ferrous iron transport protein B F0315_09415 PF03485 Arginyl tRNA synthetase N terminal domain F0315_09415 PF05746 DALR anticodon binding domain F0315_09415 PF00750 tRNA synthetases class I (R) F0315_09425 PF00675 Insulinase (Peptidase family M16) F0315_09425 PF05193 Peptidase M16 inactive domain F0315_09430 PF00300 Histidine phosphatase superfamily (branch 1) F0315_09435 PF00771 FHIPEP family F0315_09440 PF00448 SRP54-type protein, GTPase domain F0315_09445 PF10609 NUBPL iron-transfer P-loop NTPase F0315_09450 PF04542 Sigma-70 region 2 F0315_09450 PF04545 Sigma-70, region 4 F0315_09450 PF04539 Sigma-70 region 3 F0315_09455 PF00072 Response regulator receiver domain F0315_09460 PF04344 Chemotaxis phosphatase, CheZ F0315_09465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_09465 PF02895 Signal transducing histidine kinase, homodimeric domain F0315_09465 PF01627 Hpt domain F0315_09465 PF07194 P2 response regulator binding domain F0315_09465 PF01584 CheW-like domain F0315_09470 PF01339 CheB methylesterase F0315_09470 PF00072 Response regulator receiver domain F0315_09475 PF13614 AAA domain F0315_09485 PF01584 CheW-like domain F0315_09495 PF00005 ABC transporter F0315_09500 PF03379 CcmB protein F0315_09505 PF01578 Cytochrome C assembly protein F0315_09510 PF04995 Heme exporter protein D (CcmD) F0315_09515 PF03100 CcmE F0315_09520 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F0315_09520 PF01578 Cytochrome C assembly protein F0315_09525 PF08534 Redoxin F0315_09530 PF03918 Cytochrome C biogenesis protein F0315_09540 PF04333 MlaA lipoprotein F0315_09555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F0315_09555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F0315_09560 PF00462 Glutaredoxin F0315_09590 PF01751 Toprim domain F0315_09590 PF01131 DNA topoisomerase F0315_09620 PF11867 Domain of unknown function (DUF3387) F0315_09620 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) F0315_09620 PF18766 SWI2/SNF2 ATPase F0315_09655 PF05638 Type VI secretion system effector, Hcp F0315_09665 PF00850 Histone deacetylase domain F0315_09680 PF00884 Sulfatase F0315_09680 PF11893 Domain of unknown function (DUF3413) F0315_09685 PF07208 Protein of unknown function (DUF1414) F0315_09690 PF04245 37-kD nucleoid-associated bacterial protein F0315_09700 PF03553 Na+/H+ antiporter family F0315_09705 PF02774 Semialdehyde dehydrogenase, dimerisation domain F0315_09705 PF01118 Semialdehyde dehydrogenase, NAD binding domain F0315_09710 PF01914 MarC family integral membrane protein F0315_09715 PF00171 Aldehyde dehydrogenase family F0315_09715 PF00465 Iron-containing alcohol dehydrogenase F0315_09730 PF01740 STAS domain F0315_09730 PF00916 Sulfate permease family F0315_09735 PF00575 S1 RNA binding domain F0315_09735 PF12111 Polyribonucleotide phosphorylase C terminal F0315_09735 PF10150 Ribonuclease E/G family F0315_09750 PF00849 RNA pseudouridylate synthase F0315_09750 PF01479 S4 domain F0315_09755 PF02545 Maf-like protein F0315_09760 PF02620 Large ribosomal RNA subunit accumulation protein YceD F0315_09765 PF01783 Ribosomal L32p protein family F0315_09770 PF02504 Fatty acid synthesis protein F0315_09775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F0315_09775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F0315_09780 PF00698 Acyl transferase domain F0315_09790 PF00550 Phosphopantetheine attachment site F0315_09795 PF02801 Beta-ketoacyl synthase, C-terminal domain F0315_09795 PF00109 Beta-ketoacyl synthase, N-terminal domain F0315_09800 PF01063 Amino-transferase class IV F0315_09805 PF02618 YceG-like family F0315_09810 PF02223 Thymidylate kinase F0315_09815 PF09115 DNA polymerase III, delta subunit, C terminal F0315_09820 PF01026 TatD related DNase F0315_09825 PF00367 phosphotransferase system, EIIB F0315_09825 PF02378 Phosphotransferase system, EIIC F0315_09835 PF00209 Sodium:neurotransmitter symporter family F0315_09850 PF01734 Patatin-like phospholipase F0315_09855 PF00224 Pyruvate kinase, barrel domain F0315_09855 PF02887 Pyruvate kinase, alpha/beta domain F0315_09860 PF00480 ROK family F0315_09865 PF00072 Response regulator receiver domain F0315_09865 PF01584 CheW-like domain F0315_09875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F0315_09895 PF13847 Methyltransferase domain F0315_09905 PF01263 Aldose 1-epimerase F0315_09910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F0315_09910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F0315_09915 PF01641 SelR domain F0315_09930 PF17763 Glutaminase/Asparaginase C-terminal domain F0315_09930 PF00710 Asparaginase, N-terminal F0315_09935 PF01343 Peptidase family S49 F0315_09940 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_09940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F0315_09945 PF01842 ACT domain F0315_09945 PF00551 Formyl transferase F0315_09955 PF04851 Type III restriction enzyme, res subunit F0315_09955 PF13307 Helicase C-terminal domain F0315_09960 PF00814 Glycoprotease family F0315_09975 PF00561 alpha/beta hydrolase fold F0315_09980 PF13193 AMP-binding enzyme C-terminal domain F0315_09980 PF00501 AMP-binding enzyme F0315_09985 PF01612 3'-5' exonuclease F0315_09985 PF00570 HRDC domain F0315_10005 PF13286 Phosphohydrolase-associated domain F0315_10005 PF01966 HD domain F0315_10015 PF00155 Aminotransferase class I and II F0315_10020 PF00425 chorismate binding enzyme F0315_10025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F0315_10025 PF16582 Middle domain of thiamine pyrophosphate F0315_10025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F0315_10030 PF12697 Alpha/beta hydrolase family F0315_10035 PF00378 Enoyl-CoA hydratase/isomerase F0315_10040 PF13378 Enolase C-terminal domain-like F0315_10045 PF00501 AMP-binding enzyme F0315_10045 PF13193 AMP-binding enzyme C-terminal domain F0315_10050 PF03594 Benzoate membrane transport protein F0315_10055 PF01381 Helix-turn-helix F0315_10055 PF07883 Cupin domain F0315_10060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_10060 PF00672 HAMP domain F0315_10065 PF07690 Major Facilitator Superfamily F0315_10085 PF04170 NlpE N-terminal domain F0315_10090 PF03776 Septum formation topological specificity factor MinE F0315_10095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F0315_10100 PF03775 Septum formation inhibitor MinC, C-terminal domain F0315_10100 PF05209 Septum formation inhibitor MinC, N-terminal domain F0315_10105 PF05166 YcgL domain F0315_10110 PF13406 Transglycosylase SLT domain F0315_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_10115 PF03466 LysR substrate binding domain F0315_10125 PF07670 Nucleoside recognition F0315_10125 PF07662 Na+ dependent nucleoside transporter C-terminus F0315_10125 PF01773 Na+ dependent nucleoside transporter N-terminus F0315_10130 PF00704 Glycosyl hydrolases family 18 F0315_10140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F0315_10140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F0315_10175 PF13657 HipA N-terminal domain F0315_10175 PF07804 HipA-like C-terminal domain F0315_10185 PF01381 Helix-turn-helix F0315_10195 PF02583 Metal-sensitive transcriptional repressor F0315_10200 PF03824 High-affinity nickel-transport protein F0315_10205 PF13493 Domain of unknown function (DUF4118) F0315_10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_10205 PF00512 His Kinase A (phospho-acceptor) domain F0315_10205 PF02702 Osmosensitive K+ channel His kinase sensor domain F0315_10210 PF00486 Transcriptional regulatory protein, C terminal F0315_10210 PF00072 Response regulator receiver domain F0315_10215 PF02386 Cation transport protein F0315_10220 PF02080 TrkA-C domain F0315_10220 PF02254 TrkA-N domain F0315_10225 PF02386 Cation transport protein F0315_10245 PF07715 TonB-dependent Receptor Plug Domain F0315_10245 PF00593 TonB dependent receptor F0315_10250 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) F0315_10255 PF06276 Ferric iron reductase FhuF-like transporter F0315_10255 PF04183 IucA / IucC family F0315_10265 PF04183 IucA / IucC family F0315_10265 PF06276 Ferric iron reductase FhuF-like transporter F0315_10270 PF01032 FecCD transport family F0315_10275 PF01497 Periplasmic binding protein F0315_10280 PF00005 ABC transporter F0315_10315 PF01569 PAP2 superfamily F0315_10340 PF00990 Diguanylate cyclase, GGDEF domain F0315_10340 PF03707 Bacterial signalling protein N terminal repeat F0315_10340 PF13188 PAS domain F0315_10340 PF00563 EAL domain F0315_10355 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F0315_10360 PF03480 Bacterial extracellular solute-binding protein, family 7 F0315_10365 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F0315_10370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F0315_10375 PF02954 Bacterial regulatory protein, Fis family F0315_10375 PF00072 Response regulator receiver domain F0315_10375 PF00158 Sigma-54 interaction domain F0315_10380 PF00512 His Kinase A (phospho-acceptor) domain F0315_10380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_10390 PF05698 Bacterial trigger factor protein (TF) C-terminus F0315_10390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0315_10390 PF05697 Bacterial trigger factor protein (TF) F0315_10395 PF00574 Clp protease F0315_10400 PF10431 C-terminal, D2-small domain, of ClpB protein F0315_10400 PF06689 ClpX C4-type zinc finger F0315_10400 PF07724 AAA domain (Cdc48 subfamily) F0315_10405 PF02190 ATP-dependent protease La (LON) substrate-binding domain F0315_10405 PF05362 Lon protease (S16) C-terminal proteolytic domain F0315_10405 PF00004 ATPase family associated with various cellular activities (AAA) F0315_10410 PF00216 Bacterial DNA-binding protein F0315_10415 PF13145 PPIC-type PPIASE domain F0315_10425 PF02224 Cytidylate kinase F0315_10430 PF00575 S1 RNA binding domain F0315_10435 PF00216 Bacterial DNA-binding protein F0315_10440 PF06305 Lipopolysaccharide assembly protein A domain F0315_10445 PF18073 Rubredoxin metal binding domain F0315_10450 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F0315_10455 PF00528 Binding-protein-dependent transport system inner membrane component F0315_10460 PF12911 N-terminal TM domain of oligopeptide transport permease C F0315_10460 PF00528 Binding-protein-dependent transport system inner membrane component F0315_10465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_10470 PF00005 ABC transporter F0315_10470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_10475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_10475 PF00005 ABC transporter F0315_10490 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) F0315_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_10500 PF03466 LysR substrate binding domain F0315_10510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F0315_10510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F0315_10515 PF01037 Lrp/AsnC ligand binding domain F0315_10520 PF09397 Ftsk gamma domain F0315_10520 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F0315_10520 PF17854 FtsK alpha domain F0315_10520 PF01580 FtsK/SpoIIIE family F0315_10525 PF02600 Disulfide bond formation protein DsbB F0315_10530 PF06450 Bacterial Na+/H+ antiporter B (NhaB) F0315_10535 PF07840 FadR C-terminal domain F0315_10535 PF00392 Bacterial regulatory proteins, gntR family F0315_10545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_10545 PF17200 Single Cache domain 2 F0315_10545 PF00672 HAMP domain F0315_10550 PF01230 HIT domain F0315_10565 PF13036 Peptidoglycan-synthase activator LpoB F0315_10565 PF08139 Prokaryotic membrane lipoprotein lipid attachment site F0315_10575 PF05728 Uncharacterised protein family (UPF0227) F0315_10580 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_10590 PF07968 Leukocidin/Hemolysin toxin family F0315_10590 PF12563 Hemolytic toxin N terminal F0315_10590 PF16458 Beta-prism lectin F0315_10600 PF00270 DEAD/DEAH box helicase F0315_10600 PF00271 Helicase conserved C-terminal domain F0315_10600 PF03461 TRCF domain F0315_10600 PF02559 CarD-like/TRCF domain F0315_10600 PF17757 UvrB interaction domain F0315_10610 PF12704 MacB-like periplasmic core domain F0315_10610 PF02687 FtsX-like permease family F0315_10615 PF00005 ABC transporter F0315_10620 PF12704 MacB-like periplasmic core domain F0315_10620 PF02687 FtsX-like permease family F0315_10630 PF03772 Competence protein F0315_10630 PF00753 Metallo-beta-lactamase superfamily F0315_10630 PF13567 Domain of unknown function (DUF4131) F0315_10635 PF00005 ABC transporter F0315_10635 PF00664 ABC transporter transmembrane region F0315_10640 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F0315_10645 PF03966 Trm112p-like protein F0315_10650 PF02348 Cytidylyltransferase F0315_10670 PF08521 Two-component sensor kinase N-terminal F0315_10670 PF00512 His Kinase A (phospho-acceptor) domain F0315_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_10675 PF00072 Response regulator receiver domain F0315_10675 PF00486 Transcriptional regulatory protein, C terminal F0315_10680 PF02378 Phosphotransferase system, EIIC F0315_10680 PF00367 phosphotransferase system, EIIB F0315_10685 PF04293 SpoVR like protein F0315_10690 PF04285 Protein of unknown function (DUF444) F0315_10695 PF06798 PrkA serine protein kinase C-terminal domain F0315_10695 PF08298 PrkA AAA domain F0315_10700 PF03887 YfbU domain F0315_10710 PF04055 Radical SAM superfamily F0315_10715 PF00672 HAMP domain F0315_10715 PF02743 Cache domain F0315_10715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_10760 PF01228 Glycine radical F0315_10775 PF00005 ABC transporter F0315_10780 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0315_10785 PF00528 Binding-protein-dependent transport system inner membrane component F0315_10790 PF00528 Binding-protein-dependent transport system inner membrane component F0315_10795 PF03372 Endonuclease/Exonuclease/phosphatase family F0315_10800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_10800 PF00672 HAMP domain F0315_10805 PF10689 Protein of unknown function (DUF2496) F0315_10810 PF07445 Primosomal replication protein priC F0315_10815 PF01925 Sulfite exporter TauE/SafE F0315_10820 PF13307 Helicase C-terminal domain F0315_10820 PF06733 DEAD_2 F0315_10830 PF02810 SEC-C motif F0315_10835 PF08668 HDOD domain F0315_10835 PF00563 EAL domain F0315_10840 PF00149 Calcineurin-like phosphoesterase F0315_10845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F0315_10850 PF09190 DALR domain F0315_10850 PF01406 tRNA synthetases class I (C) catalytic domain F0315_10855 PF02075 Crossover junction endodeoxyribonuclease RuvC F0315_10860 PF01330 RuvA N terminal domain F0315_10860 PF07499 RuvA, C-terminal domain F0315_10865 PF05491 RuvB C-terminal winged helix domain F0315_10865 PF17864 RuvB AAA lid domain F0315_10865 PF05496 Holliday junction DNA helicase RuvB P-loop domain F0315_10870 PF01654 Cytochrome bd terminal oxidase subunit I F0315_10875 PF02322 Cytochrome bd terminal oxidase subunit II F0315_10880 PF08173 Membrane bound YbgT-like protein F0315_10885 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) F0315_10890 PF03061 Thioesterase superfamily F0315_10895 PF01618 MotA/TolQ/ExbB proton channel family F0315_10900 PF02472 Biopolymer transport protein ExbD/TolR F0315_10910 PF04052 TolB amino-terminal domain F0315_10910 PF07676 WD40-like Beta Propeller Repeat F0315_10915 PF00691 OmpA family F0315_10925 PF02445 Quinolinate synthetase A protein F0315_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_10935 PF00072 Response regulator receiver domain F0315_10935 PF09308 LuxQ, periplasmic F0315_10935 PF00512 His Kinase A (phospho-acceptor) domain F0315_10940 PF06610 L-alanine exporter F0315_10945 PF00171 Aldehyde dehydrogenase family F0315_10950 PF02954 Bacterial regulatory protein, Fis family F0315_10950 PF01590 GAF domain F0315_10950 PF00158 Sigma-54 interaction domain F0315_10955 PF09905 DNA-binding protein VF530 F0315_10975 PF00480 ROK family F0315_10980 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase F0315_10990 PF03480 Bacterial extracellular solute-binding protein, family 7 F0315_10995 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F0315_11000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F0315_11005 PF00701 Dihydrodipicolinate synthetase family F0315_11010 PF01380 SIS domain F0315_11010 PF01418 Helix-turn-helix domain, rpiR family F0315_11015 PF07646 Kelch motif F0315_11040 PF03606 C4-dicarboxylate anaerobic carrier F0315_11045 PF01546 Peptidase family M20/M25/M40 F0315_11045 PF07687 Peptidase dimerisation domain F0315_11050 PF03575 Peptidase family S51 F0315_11055 PF00563 EAL domain F0315_11055 PF10388 EAL-domain associated signalling protein domain F0315_11060 PF00873 AcrB/AcrD/AcrF family F0315_11065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0315_11075 PF02470 MlaD protein F0315_11080 PF04403 Paraquat-inducible protein A F0315_11085 PF05552 Conserved TM helix F0315_11085 PF00924 Mechanosensitive ion channel F0315_11095 PF00440 Bacterial regulatory proteins, tetR family F0315_11095 PF08362 YcdC-like protein, C-terminal region F0315_11100 PF00171 Aldehyde dehydrogenase family F0315_11105 PF07383 Protein of unknown function (DUF1496) F0315_11115 PF16295 Tetracyclin repressor-like, C-terminal domain F0315_11115 PF00440 Bacterial regulatory proteins, tetR family F0315_11120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F0315_11120 PF02770 Acyl-CoA dehydrogenase, middle domain F0315_11120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F0315_11120 PF09317 Domain of unknown function (DUF1974) F0315_11125 PF07055 Enoyl reductase FAD binding domain F0315_11125 PF12241 Trans-2-enoyl-CoA reductase catalytic region F0315_11125 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F0315_11130 PF01176 Translation initiation factor 1A / IF-1 F0315_11135 PF04376 Arginine-tRNA-protein transferase, N terminus F0315_11135 PF04377 Arginine-tRNA-protein transferase, C terminus F0315_11140 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F0315_11150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F0315_11155 PF10692 Protein of unknown function (DUF2498) F0315_11160 PF01131 DNA topoisomerase F0315_11160 PF01396 Topoisomerase DNA binding C4 zinc finger F0315_11160 PF08272 Topoisomerase I zinc-ribbon-like F0315_11160 PF01751 Toprim domain F0315_11165 PF00483 Nucleotidyl transferase F0315_11170 PF00534 Glycosyl transferases group 1 F0315_11170 PF08323 Starch synthase catalytic domain F0315_11195 PF04993 TfoX N-terminal domain F0315_11195 PF04994 TfoX C-terminal domain F0315_11200 PF00356 Bacterial regulatory proteins, lacI family F0315_11210 PF02613 Nitrate reductase delta subunit F0315_11215 PF00072 Response regulator receiver domain F0315_11215 PF00486 Transcriptional regulatory protein, C terminal F0315_11220 PF02698 DUF218 domain F0315_11230 PF03882 MukF winged-helix domain F0315_11230 PF17193 MukF C-terminal domain F0315_11230 PF17192 MukF middle domain F0315_11235 PF04288 MukE-like family F0315_11240 PF16330 MukB hinge domain F0315_11240 PF04310 MukB N-terminal F0315_11245 PF01037 Lrp/AsnC ligand binding domain F0315_11250 PF01810 LysE type translocator F0315_11255 PF04055 Radical SAM superfamily F0315_11255 PF11842 Domain of unknown function (DUF3362) F0315_11255 PF08497 Radical SAM N-terminal F0315_11260 PF00990 Diguanylate cyclase, GGDEF domain F0315_11260 PF00563 EAL domain F0315_11260 PF03707 Bacterial signalling protein N terminal repeat F0315_11265 PF00675 Insulinase (Peptidase family M16) F0315_11265 PF05193 Peptidase M16 inactive domain F0315_11280 PF03466 LysR substrate binding domain F0315_11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_11285 PF08267 Cobalamin-independent synthase, N-terminal domain F0315_11285 PF01717 Cobalamin-independent synthase, Catalytic domain F0315_11295 PF03795 YCII-related domain F0315_11300 PF03061 Thioesterase superfamily F0315_11305 PF04279 Intracellular septation protein A F0315_11310 PF00990 Diguanylate cyclase, GGDEF domain F0315_11310 PF00563 EAL domain F0315_11310 PF03707 Bacterial signalling protein N terminal repeat F0315_11320 PF02698 DUF218 domain F0315_11325 PF01370 NAD dependent epimerase/dehydratase family F0315_11340 PF01226 Formate/nitrite transporter F0315_11350 PF06796 Periplasmic nitrate reductase protein NapE F0315_11355 PF03264 NapC/NirT cytochrome c family, N-terminal region F0315_11360 PF00384 Molybdopterin oxidoreductase F0315_11360 PF18364 Molybdopterin oxidoreductase N-terminal domain F0315_11360 PF01568 Molydopterin dinucleotide binding domain F0315_11380 PF02833 DHHA2 domain F0315_11380 PF01368 DHH family F0315_11395 PF00005 ABC transporter F0315_11400 PF00005 ABC transporter F0315_11400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_11405 PF00528 Binding-protein-dependent transport system inner membrane component F0315_11405 PF12911 N-terminal TM domain of oligopeptide transport permease C F0315_11410 PF00528 Binding-protein-dependent transport system inner membrane component F0315_11415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_11420 PF00158 Sigma-54 interaction domain F0315_11420 PF02954 Bacterial regulatory protein, Fis family F0315_11425 PF04012 PspA/IM30 family F0315_11440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0315_11450 PF00873 AcrB/AcrD/AcrF family F0315_11455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F0315_11455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F0315_11460 PF03352 Methyladenine glycosylase F0315_11465 PF01053 Cys/Met metabolism PLP-dependent enzyme F0315_11470 PF13091 PLD-like domain F0315_11470 PF13396 Phospholipase_D-nuclease N-terminal F0315_11475 PF00209 Sodium:neurotransmitter symporter family F0315_11480 PF00195 Chalcone and stilbene synthases, N-terminal domain F0315_11480 PF02797 Chalcone and stilbene synthases, C-terminal domain F0315_11485 PF00849 RNA pseudouridylate synthase F0315_11490 PF01066 CDP-alcohol phosphatidyltransferase F0315_11495 PF00005 ABC transporter F0315_11500 PF00528 Binding-protein-dependent transport system inner membrane component F0315_11505 PF13416 Bacterial extracellular solute-binding protein F0315_11515 PF06945 Protein of unknown function (DUF1289) F0315_11530 PF00005 ABC transporter F0315_11535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0315_11540 PF03222 Tryptophan/tyrosine permease family F0315_11550 PF03448 MgtE intracellular N domain F0315_11550 PF00571 CBS domain F0315_11550 PF01769 Divalent cation transporter F0315_11555 PF00072 Response regulator receiver domain F0315_11555 PF09308 LuxQ, periplasmic F0315_11555 PF00512 His Kinase A (phospho-acceptor) domain F0315_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_11560 PF00990 Diguanylate cyclase, GGDEF domain F0315_11560 PF03707 Bacterial signalling protein N terminal repeat F0315_11560 PF00563 EAL domain F0315_11570 PF08453 Peptidase family M9 N-terminal F0315_11570 PF01752 Collagenase F0315_11570 PF04151 Bacterial pre-peptidase C-terminal domain F0315_11580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_11580 PF12793 Sugar transport-related sRNA regulator N-term F0315_11600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_11600 PF00672 HAMP domain F0315_11605 PF13302 Acetyltransferase (GNAT) domain F0315_11620 PF01386 Ribosomal L25p family F0315_11625 PF11808 Phosphate regulon sensor protein PhoR F0315_11625 PF00989 PAS fold F0315_11625 PF00512 His Kinase A (phospho-acceptor) domain F0315_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_11630 PF00072 Response regulator receiver domain F0315_11630 PF00486 Transcriptional regulatory protein, C terminal F0315_11640 PF00271 Helicase conserved C-terminal domain F0315_11640 PF04851 Type III restriction enzyme, res subunit F0315_11645 PF00849 RNA pseudouridylate synthase F0315_11645 PF01479 S4 domain F0315_11650 PF07690 Major Facilitator Superfamily F0315_11660 PF11066 Protein of unknown function (DUF2867) F0315_11660 PF13460 NAD(P)H-binding F0315_11665 PF01554 MatE F0315_11670 PF00005 ABC transporter F0315_11685 PF06965 Na+/H+ antiporter 1 F0315_11695 PF00202 Aminotransferase class-III F0315_11700 PF16653 Saccharopine dehydrogenase C-terminal domain F0315_11700 PF03435 Saccharopine dehydrogenase NADP binding domain F0315_11710 PF05736 OprF membrane domain F0315_11710 PF00691 OmpA family F0315_11715 PF02321 Outer membrane efflux protein F0315_11800 PF03466 LysR substrate binding domain F0315_11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_11810 PF01863 Protein of unknown function DUF45 F0315_11815 PF05971 RNA methyltransferase F0315_11830 PF04204 Homoserine O-succinyltransferase F0315_11850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F0315_11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_11865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F0315_11865 PF17203 Single cache domain 3 F0315_11865 PF00989 PAS fold F0315_11870 PF00072 Response regulator receiver domain F0315_11880 PF01584 CheW-like domain F0315_11880 PF00072 Response regulator receiver domain F0315_11900 PF00072 Response regulator receiver domain F0315_11900 PF00990 Diguanylate cyclase, GGDEF domain F0315_11915 PF07690 Major Facilitator Superfamily F0315_11920 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain F0315_11920 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain F0315_11925 PF08544 GHMP kinases C terminal F0315_11925 PF00288 GHMP kinases N terminal domain F0315_11925 PF10509 Galactokinase galactose-binding signature F0315_11930 PF01263 Aldose 1-epimerase F0315_11935 PF07694 5TMR of 5TMR-LYT F0315_11935 PF00990 Diguanylate cyclase, GGDEF domain F0315_11940 PF00672 HAMP domain F0315_11940 PF00990 Diguanylate cyclase, GGDEF domain F0315_11940 PF17154 Gammaproteobacterial periplasmic sensor domain F0315_11940 PF00563 EAL domain F0315_11945 PF00199 Catalase F0315_11945 PF06628 Catalase-related immune-responsive F0315_11990 PF00206 Lyase F0315_11990 PF10415 Fumarase C C-terminus F0315_12000 PF01654 Cytochrome bd terminal oxidase subunit I F0315_12005 PF02322 Cytochrome bd terminal oxidase subunit II F0315_12015 PF03466 LysR substrate binding domain F0315_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_12030 PF00141 Peroxidase F0315_12035 PF00232 Glycosyl hydrolase family 1 F0315_12040 PF00356 Bacterial regulatory proteins, lacI family F0315_12045 PF01042 Endoribonuclease L-PSP F0315_12050 PF04074 YhcH/YjgK/YiaL F0315_12055 PF03009 Glycerophosphoryl diester phosphodiesterase family F0315_12060 PF00455 DeoR C terminal sensor domain F0315_12060 PF08220 DeoR-like helix-turn-helix domain F0315_12065 PF17912 MalK OB fold domain F0315_12065 PF00005 ABC transporter F0315_12070 PF00528 Binding-protein-dependent transport system inner membrane component F0315_12075 PF00528 Binding-protein-dependent transport system inner membrane component F0315_12080 PF13416 Bacterial extracellular solute-binding protein F0315_12090 PF01618 MotA/TolQ/ExbB proton channel family F0315_12095 PF01618 MotA/TolQ/ExbB proton channel family F0315_12100 PF02472 Biopolymer transport protein ExbD/TolR F0315_12105 PF03544 Gram-negative bacterial TonB protein C-terminal F0315_12115 PF01068 ATP dependent DNA ligase domain F0315_12115 PF14743 DNA ligase OB-like domain F0315_12125 PF01554 MatE F0315_12145 PF00877 NlpC/P60 family F0315_12150 PF02743 Cache domain F0315_12150 PF00672 HAMP domain F0315_12150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_12165 PF00480 ROK family F0315_12175 PF00994 Probable molybdopterin binding domain F0315_12175 PF03454 MoeA C-terminal region (domain IV) F0315_12175 PF03453 MoeA N-terminal region (domain I and II) F0315_12180 PF12804 MobA-like NTP transferase domain F0315_12185 PF00005 ABC transporter F0315_12185 PF08402 TOBE domain F0315_12190 PF00528 Binding-protein-dependent transport system inner membrane component F0315_12195 PF12849 PBP superfamily domain F0315_12200 PF00072 Response regulator receiver domain F0315_12200 PF02954 Bacterial regulatory protein, Fis family F0315_12200 PF00158 Sigma-54 interaction domain F0315_12205 PF00512 His Kinase A (phospho-acceptor) domain F0315_12205 PF00989 PAS fold F0315_12205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_12210 PF00005 ABC transporter F0315_12210 PF12848 ABC transporter F0315_12215 PF02634 FdhD/NarQ family F0315_12235 PF02613 Nitrate reductase delta subunit F0315_12245 PF00384 Molybdopterin oxidoreductase F0315_12245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F0315_12245 PF01568 Molydopterin dinucleotide binding domain F0315_12250 PF13247 4Fe-4S dicluster domain F0315_12265 PF02146 Sir2 family F0315_12270 PF04461 Protein of unknown function (DUF520) F0315_12275 PF00793 DAHP synthetase I family F0315_12290 PF13509 S1 domain F0315_12290 PF17783 CvfB-like winged helix domain F0315_12295 PF01189 16S rRNA methyltransferase RsmB/F F0315_12295 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF F0315_12295 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF F0315_12300 PF02470 MlaD protein F0315_12305 PF04403 Paraquat-inducible protein A F0315_12310 PF00664 ABC transporter transmembrane region F0315_12310 PF00005 ABC transporter F0315_12315 PF13185 GAF domain F0315_12320 PF17516 ProQ C-terminal domain F0315_12320 PF04352 ProQ/FINO family F0315_12325 PF17804 Tail specific protease N-terminal domain F0315_12325 PF03572 Peptidase family S41 F0315_12325 PF00595 PDZ domain F0315_12325 PF11818 C-terminal domain of tail specific protease (DUF3340) F0315_12335 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F0315_12335 PF01433 Peptidase family M1 domain F0315_12335 PF11940 Domain of unknown function (DUF3458) Ig-like fold F0315_12345 PF05088 Bacterial NAD-glutamate dehydrogenase F0315_12350 PF01180 Dihydroorotate dehydrogenase F0315_12355 PF07126 Cell-division protein ZapC F0315_12360 PF01170 Putative RNA methylase family UPF0020 F0315_12360 PF02926 THUMP domain F0315_12360 PF10672 S-adenosylmethionine-dependent methyltransferase F0315_12380 PF04957 Ribosome modulation factor F0315_12385 PF07977 FabA-like domain F0315_12390 PF05362 Lon protease (S16) C-terminal proteolytic domain F0315_12390 PF13654 AAA domain F0315_12395 PF06303 MatP N-terminal domain F0315_12395 PF17414 MatP C-terminal ribbon-helix-helix domain F0315_12425 PF13087 AAA domain F0315_12425 PF13091 PLD-like domain F0315_12430 PF13186 Iron-sulfur cluster-binding domain F0315_12430 PF04055 Radical SAM superfamily F0315_12445 PF00717 Peptidase S24-like F0315_12470 PF07634 RtxA repeat F0315_12470 PF16671 Actin cross-linking domain F0315_12470 PF11647 Membrane Localization Domain F0315_12470 PF11713 Peptidase C80 family F0315_12470 PF12146 Serine aminopeptidase, S33 F0315_12475 PF02794 RTX toxin acyltransferase family F0315_12485 PF03412 Peptidase C39 family F0315_12485 PF00005 ABC transporter F0315_12485 PF00664 ABC transporter transmembrane region F0315_12495 PF03412 Peptidase C39 family F0315_12495 PF00005 ABC transporter F0315_12495 PF00664 ABC transporter transmembrane region F0315_12500 PF00512 His Kinase A (phospho-acceptor) domain F0315_12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_12500 PF00672 HAMP domain F0315_12500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F0315_12500 PF00072 Response regulator receiver domain F0315_12500 PF01627 Hpt domain F0315_12515 PF00115 Cytochrome C and Quinol oxidase polypeptide I F0315_12530 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP F0315_12530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F0315_12540 PF00403 Heavy-metal-associated domain F0315_12555 PF00027 Cyclic nucleotide-binding domain F0315_12555 PF13545 Crp-like helix-turn-helix domain F0315_12560 PF00582 Universal stress protein family F0315_12565 PF01171 PP-loop family F0315_12585 PF00005 ABC transporter F0315_12585 PF08402 TOBE domain F0315_12590 PF00528 Binding-protein-dependent transport system inner membrane component F0315_12595 PF00528 Binding-protein-dependent transport system inner membrane component F0315_12600 PF13416 Bacterial extracellular solute-binding protein F0315_12605 PF13416 Bacterial extracellular solute-binding protein F0315_12620 PF01235 Sodium:alanine symporter family F0315_12625 PF01810 LysE type translocator F0315_12645 PF16671 Actin cross-linking domain F0315_12645 PF04717 Type VI secretion system, phage-baseplate injector F0315_12650 PF05638 Type VI secretion system effector, Hcp F0315_12655 PF02074 Carboxypeptidase Taq (M32) metallopeptidase F0315_12660 PF00270 DEAD/DEAH box helicase F0315_12660 PF00271 Helicase conserved C-terminal domain F0315_12665 PF13426 PAS domain F0315_12665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_12665 PF08447 PAS fold F0315_12670 PF02743 Cache domain F0315_12670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_12670 PF00672 HAMP domain F0315_12680 PF00893 Small Multidrug Resistance protein F0315_12685 PF07690 Major Facilitator Superfamily F0315_12690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_12690 PF03466 LysR substrate binding domain F0315_12700 PF01979 Amidohydrolase family F0315_12705 PF10437 Bacterial lipoate protein ligase C-terminus F0315_12705 PF03099 Biotin/lipoate A/B protein ligase family F0315_12710 PF00012 Hsp70 protein F0315_12720 PF11898 Domain of unknown function (DUF3418) F0315_12720 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold F0315_12720 PF00271 Helicase conserved C-terminal domain F0315_12720 PF04408 Helicase associated domain (HA2) F0315_12720 PF00270 DEAD/DEAH box helicase F0315_12745 PF00990 Diguanylate cyclase, GGDEF domain F0315_12745 PF03707 Bacterial signalling protein N terminal repeat F0315_12745 PF00563 EAL domain F0315_12760 PF00012 Hsp70 protein F0315_12765 PF00012 Hsp70 protein F0315_12770 PF17158 Membrane-associated sensor, integral membrane domain F0315_12770 PF00990 Diguanylate cyclase, GGDEF domain F0315_12780 PF00563 EAL domain F0315_12780 PF00990 Diguanylate cyclase, GGDEF domain F0315_12780 PF03707 Bacterial signalling protein N terminal repeat F0315_12800 PF06508 Queuosine biosynthesis protein QueC F0315_12805 PF04055 Radical SAM superfamily F0315_12815 PF10414 Sirohaem synthase dimerisation region F0315_12815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F0315_12815 PF14824 Sirohaem biosynthesis protein central F0315_12820 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0315_12825 PF00528 Binding-protein-dependent transport system inner membrane component F0315_12830 PF00528 Binding-protein-dependent transport system inner membrane component F0315_12835 PF00005 ABC transporter F0315_12840 PF01027 Inhibitor of apoptosis-promoting Bax1 F0315_12845 PF04358 DsrC like protein F0315_12850 PF00708 Acylphosphatase F0315_12855 PF17785 PUA-like domain F0315_12855 PF10672 S-adenosylmethionine-dependent methyltransferase F0315_12860 PF00990 Diguanylate cyclase, GGDEF domain F0315_12870 PF00462 Glutaredoxin F0315_12870 PF08534 Redoxin F0315_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_12875 PF01627 Hpt domain F0315_12875 PF00672 HAMP domain F0315_12875 PF00072 Response regulator receiver domain F0315_12875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F0315_12875 PF00512 His Kinase A (phospho-acceptor) domain F0315_12880 PF00072 Response regulator receiver domain F0315_12885 PF02798 Glutathione S-transferase, N-terminal domain F0315_12885 PF14497 Glutathione S-transferase, C-terminal domain F0315_12895 PF04209 homogentisate 1,2-dioxygenase F0315_12900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F0315_12905 PF07687 Peptidase dimerisation domain F0315_12905 PF01546 Peptidase family M20/M25/M40 F0315_12920 PF00501 AMP-binding enzyme F0315_12920 PF13193 AMP-binding enzyme C-terminal domain F0315_12920 PF16177 Acetyl-coenzyme A synthetase N-terminus F0315_12925 PF04303 PrpF protein F0315_12930 PF00694 Aconitase C-terminal domain F0315_12930 PF00330 Aconitase family (aconitate hydratase) F0315_12935 PF00285 Citrate synthase, C-terminal domain F0315_12945 PF07729 FCD domain F0315_12945 PF00392 Bacterial regulatory proteins, gntR family F0315_12965 PF01970 Tripartite tricarboxylate transporter TctA family F0315_12970 PF02653 Branched-chain amino acid transport system / permease component F0315_12975 PF00005 ABC transporter F0315_12980 PF13407 Periplasmic binding protein domain F0315_13005 PF02954 Bacterial regulatory protein, Fis family F0315_13005 PF00072 Response regulator receiver domain F0315_13005 PF00158 Sigma-54 interaction domain F0315_13010 PF00512 His Kinase A (phospho-acceptor) domain F0315_13010 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0315_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_13015 PF00939 Sodium:sulfate symporter transmembrane region F0315_13020 PF00672 HAMP domain F0315_13020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_13025 PF00842 Alanine racemase, C-terminal domain F0315_13025 PF01168 Alanine racemase, N-terminal domain F0315_13030 PF00892 EamA-like transporter family F0315_13045 PF13302 Acetyltransferase (GNAT) domain F0315_13050 PF00158 Sigma-54 interaction domain F0315_13050 PF18024 Helix-turn-helix domain F0315_13055 PF05128 Domain of unknown function (DUF697) F0315_13060 PF04317 YcjX-like family, DUF463 F0315_13075 PF04715 Anthranilate synthase component I, N terminal region F0315_13075 PF00425 chorismate binding enzyme F0315_13080 PF00293 NUDIX domain F0315_13085 PF03222 Tryptophan/tyrosine permease family F0315_13090 PF03313 Serine dehydratase alpha chain F0315_13090 PF03315 Serine dehydratase beta chain F0315_13095 PF01242 6-pyruvoyl tetrahydropterin synthase F0315_13100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_13100 PF00672 HAMP domain F0315_13105 PF00152 tRNA synthetases class II (D, K and N) F0315_13105 PF01336 OB-fold nucleic acid binding domain F0315_13110 PF02581 Thiamine monophosphate synthase F0315_13110 PF08543 Phosphomethylpyrimidine kinase F0315_13115 PF00672 HAMP domain F0315_13115 PF01966 HD domain F0315_13125 PF00155 Aminotransferase class I and II F0315_13140 PF00672 HAMP domain F0315_13140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_13140 PF17200 Single Cache domain 2 F0315_13145 PF04349 Periplasmic glucan biosynthesis protein, MdoG F0315_13150 PF13506 Glycosyl transferase family 21 F0315_13160 PF04794 YdjC-like protein F0315_13165 PF02056 Family 4 glycosyl hydrolase F0315_13165 PF11975 Family 4 glycosyl hydrolase C-terminal domain F0315_13170 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F0315_13175 PF02378 Phosphotransferase system, EIIC F0315_13180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F0315_13185 PF01522 Polysaccharide deacetylase F0315_13190 PF02028 BCCT, betaine/carnitine/choline family transporter F0315_13195 PF01047 MarR family F0315_13200 PF00196 Bacterial regulatory proteins, luxR family F0315_13200 PF00072 Response regulator receiver domain F0315_13205 PF07730 Histidine kinase F0315_13205 PF17200 Single Cache domain 2 F0315_13215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F0315_13225 PF03480 Bacterial extracellular solute-binding protein, family 7 F0315_13240 PF00753 Metallo-beta-lactamase superfamily F0315_13245 PF05951 Bacterial protein of unknown function (DUF882) F0315_13275 PF00925 GTP cyclohydrolase II F0315_13285 PF07690 Major Facilitator Superfamily F0315_13300 PF00313 'Cold-shock' DNA-binding domain F0315_13310 PF03918 Cytochrome C biogenesis protein F0315_13315 PF08534 Redoxin F0315_13320 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F0315_13320 PF01578 Cytochrome C assembly protein F0315_13325 PF03916 Polysulphide reductase, NrfD F0315_13330 PF13247 4Fe-4S dicluster domain F0315_13340 PF02335 Cytochrome c552 F0315_13350 PF00521 DNA gyrase/topoisomerase IV, subunit A F0315_13350 PF03989 DNA gyrase C-terminal domain, beta-propeller F0315_13360 PF00317 Ribonucleotide reductase, all-alpha domain F0315_13360 PF03477 ATP cone domain F0315_13360 PF02867 Ribonucleotide reductase, barrel domain F0315_13365 PF00268 Ribonucleotide reductase, small chain F0315_13370 PF00970 Oxidoreductase FAD-binding domain F0315_13370 PF00175 Oxidoreductase NAD-binding domain F0315_13370 PF00111 2Fe-2S iron-sulfur cluster binding domain F0315_13380 PF00994 Probable molybdopterin binding domain F0315_13395 PF02743 Cache domain F0315_13395 PF00672 HAMP domain F0315_13395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_13415 PF00005 ABC transporter F0315_13420 PF01032 FecCD transport family F0315_13425 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F0315_13435 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F0315_13440 PF02654 Cobalamin-5-phosphate synthase F0315_13445 PF02277 Phosphoribosyltransferase F0315_13450 PF01641 SelR domain F0315_13460 PF00929 Exonuclease F0315_13460 PF08411 Exonuclease C-terminal F0315_13465 PF03788 LrgA family F0315_13470 PF04172 LrgB-like family F0315_13475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F0315_13475 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region F0315_13485 PF02222 ATP-grasp domain F0315_13495 PF05724 Thiopurine S-methyltransferase (TPMT) F0315_13515 PF00216 Bacterial DNA-binding protein F0315_13520 PF03147 Ferredoxin-fold anticodon binding domain F0315_13520 PF03484 tRNA synthetase B5 domain F0315_13520 PF03483 B3/4 domain F0315_13520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F0315_13520 PF01588 Putative tRNA binding domain F0315_13525 PF01409 tRNA synthetases class II core domain (F) F0315_13525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F0315_13530 PF00583 Acetyltransferase (GNAT) family F0315_13535 PF00563 EAL domain F0315_13535 PF00990 Diguanylate cyclase, GGDEF domain F0315_13535 PF03707 Bacterial signalling protein N terminal repeat F0315_13560 PF01066 CDP-alcohol phosphatidyltransferase F0315_13565 PF01541 GIY-YIG catalytic domain F0315_13565 PF08459 UvrC Helix-hairpin-helix N-terminal F0315_13565 PF02151 UvrB/uvrC motif F0315_13570 PF00072 Response regulator receiver domain F0315_13570 PF00196 Bacterial regulatory proteins, luxR family F0315_13575 PF00136 DNA polymerase family B F0315_13575 PF03104 DNA polymerase family B, exonuclease domain F0315_13580 PF08447 PAS fold F0315_13580 PF08448 PAS fold F0315_13580 PF00563 EAL domain F0315_13580 PF00990 Diguanylate cyclase, GGDEF domain F0315_13590 PF01132 Elongation factor P (EF-P) OB domain F0315_13590 PF09285 Elongation factor P, C-terminal F0315_13590 PF08207 Elongation factor P (EF-P) KOW-like domain F0315_13595 PF04269 Protein of unknown function, DUF440 F0315_13605 PF07702 UTRA domain F0315_13605 PF00392 Bacterial regulatory proteins, gntR family F0315_13610 PF01979 Amidohydrolase family F0315_13615 PF00491 Arginase family F0315_13620 PF17391 Urocanase N-terminal domain F0315_13620 PF01175 Urocanase Rossmann-like domain F0315_13620 PF17392 Urocanase C-terminal domain F0315_13625 PF00221 Aromatic amino acid lyase F0315_13640 PF04191 Phospholipid methyltransferase F0315_13645 PF02913 FAD linked oxidases, C-terminal domain F0315_13645 PF01565 FAD binding domain F0315_13645 PF13183 4Fe-4S dicluster domain F0315_13665 PF00691 OmpA family F0315_13665 PF13488 Glycine zipper F0315_13685 PF01259 SAICAR synthetase F0315_13695 PF00390 Malic enzyme, N-terminal domain F0315_13695 PF03949 Malic enzyme, NAD binding domain F0315_13705 PF02698 DUF218 domain F0315_13710 PF00990 Diguanylate cyclase, GGDEF domain F0315_13710 PF00072 Response regulator receiver domain F0315_13715 PF00266 Aminotransferase class-V F0315_13725 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_13730 PF00005 ABC transporter F0315_13730 PF00664 ABC transporter transmembrane region F0315_13735 PF00005 ABC transporter F0315_13735 PF00664 ABC transporter transmembrane region F0315_13740 PF01479 S4 domain F0315_13740 PF00849 RNA pseudouridylate synthase F0315_13745 PF01300 Telomere recombination F0315_13750 PF02811 PHP domain F0315_13755 PF08056 Tryptophan operon leader peptide F0315_13760 PF04715 Anthranilate synthase component I, N terminal region F0315_13760 PF00425 chorismate binding enzyme F0315_13765 PF00117 Glutamine amidotransferase class-I F0315_13770 PF00591 Glycosyl transferase family, a/b domain F0315_13770 PF02885 Glycosyl transferase family, helical bundle domain F0315_13775 PF00218 Indole-3-glycerol phosphate synthase F0315_13775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F0315_13780 PF00291 Pyridoxal-phosphate dependent enzyme F0315_13785 PF00290 Tryptophan synthase alpha chain F0315_13790 PF00375 Sodium:dicarboxylate symporter family F0315_13795 PF00265 Thymidine kinase F0315_13800 PF01336 OB-fold nucleic acid binding domain F0315_13800 PF02938 GAD domain F0315_13800 PF00152 tRNA synthetases class II (D, K and N) F0315_13805 PF01904 Protein of unknown function DUF72 F0315_13810 PF13649 Methyltransferase domain F0315_13815 PF08003 Protein of unknown function (DUF1698) F0315_13820 PF18030 RimK PreATP-grasp domain F0315_13820 PF08443 RimK-like ATP-grasp domain F0315_13835 PF00266 Aminotransferase class-V F0315_13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_13845 PF00512 His Kinase A (phospho-acceptor) domain F0315_13845 PF00989 PAS fold F0315_13860 PF04994 TfoX C-terminal domain F0315_13860 PF04993 TfoX N-terminal domain F0315_13870 PF03956 Lysine exporter LysO F0315_13880 PF00282 Pyridoxal-dependent decarboxylase conserved domain F0315_13885 PF01418 Helix-turn-helix domain, rpiR family F0315_13885 PF01380 SIS domain F0315_13890 PF00171 Aldehyde dehydrogenase family F0315_13890 PF00465 Iron-containing alcohol dehydrogenase F0315_13895 PF00462 Glutaredoxin F0315_13900 PF06826 Predicted Permease Membrane Region F0315_13900 PF02080 TrkA-C domain F0315_13905 PF07724 AAA domain (Cdc48 subfamily) F0315_13905 PF00004 ATPase family associated with various cellular activities (AAA) F0315_13905 PF17871 AAA lid domain F0315_13905 PF02861 Clp amino terminal domain, pathogenicity island component F0315_13905 PF10431 C-terminal, D2-small domain, of ClpB protein F0315_13910 PF02617 ATP-dependent Clp protease adaptor protein ClpS F0315_13915 PF00313 'Cold-shock' DNA-binding domain F0315_13920 PF03971 Monomeric isocitrate dehydrogenase F0315_13925 PF00849 RNA pseudouridylate synthase F0315_13930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F0315_13930 PF01502 Phosphoribosyl-AMP cyclohydrolase F0315_13935 PF00977 Histidine biosynthesis protein F0315_13940 PF00977 Histidine biosynthesis protein F0315_13945 PF00117 Glutamine amidotransferase class-I F0315_13950 PF08645 Polynucleotide kinase 3 phosphatase F0315_13950 PF00475 Imidazoleglycerol-phosphate dehydratase F0315_13955 PF00155 Aminotransferase class I and II F0315_13960 PF00815 Histidinol dehydrogenase F0315_13965 PF01634 ATP phosphoribosyltransferase F0315_13965 PF08029 HisG, C-terminal domain F0315_13970 PF03553 Na+/H+ antiporter family F0315_13975 PF00816 H-NS histone family F0315_13980 PF00294 pfkB family carbohydrate kinase F0315_13990 PF04356 Protein of unknown function (DUF489) F0315_13995 PF08328 Adenylosuccinate lyase C-terminal F0315_13995 PF00206 Lyase F0315_14005 PF16036 Chalcone isomerase-like F0315_14030 PF00106 short chain dehydrogenase F0315_14040 PF01435 Peptidase family M48 F0315_14055 PF08241 Methyltransferase domain F0315_14060 PF00155 Aminotransferase class I and II F0315_14065 PF06968 Biotin and Thiamin Synthesis associated domain F0315_14065 PF04055 Radical SAM superfamily F0315_14070 PF00202 Aminotransferase class-III F0315_14075 PF02403 Seryl-tRNA synthetase N-terminal domain F0315_14075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F0315_14080 PF12002 MgsA AAA+ ATPase C terminal F0315_14080 PF16193 AAA C-terminal domain F0315_14080 PF00004 ATPase family associated with various cellular activities (AAA) F0315_14085 PF03548 Outer membrane lipoprotein carrier protein LolA F0315_14090 PF02810 SEC-C motif F0315_14090 PF07517 SecA DEAD-like domain F0315_14090 PF07516 SecA Wing and Scaffold domain F0315_14090 PF01043 SecA preprotein cross-linking domain F0315_14095 PF01207 Dihydrouridine synthase (Dus) F0315_14100 PF05230 MASE2 domain F0315_14100 PF00990 Diguanylate cyclase, GGDEF domain F0315_14105 PF00005 ABC transporter F0315_14110 PF02653 Branched-chain amino acid transport system / permease component F0315_14120 PF09905 DNA-binding protein VF530 F0315_14125 PF04217 Protein of unknown function, DUF412 F0315_14130 PF00871 Acetokinase family F0315_14135 PF07085 DRTGG domain F0315_14135 PF01515 Phosphate acetyl/butaryl transferase F0315_14140 PF13409 Glutathione S-transferase, N-terminal domain F0315_14145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_14145 PF00005 ABC transporter F0315_14150 PF00005 ABC transporter F0315_14150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_14155 PF00528 Binding-protein-dependent transport system inner membrane component F0315_14155 PF12911 N-terminal TM domain of oligopeptide transport permease C F0315_14160 PF00528 Binding-protein-dependent transport system inner membrane component F0315_14165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_14175 PF00512 His Kinase A (phospho-acceptor) domain F0315_14175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_14180 PF00158 Sigma-54 interaction domain F0315_14180 PF00072 Response regulator receiver domain F0315_14180 PF02954 Bacterial regulatory protein, Fis family F0315_14185 PF13188 PAS domain F0315_14185 PF03707 Bacterial signalling protein N terminal repeat F0315_14185 PF00990 Diguanylate cyclase, GGDEF domain F0315_14185 PF00563 EAL domain F0315_14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_14190 PF00512 His Kinase A (phospho-acceptor) domain F0315_14195 PF13426 PAS domain F0315_14195 PF13188 PAS domain F0315_14195 PF00989 PAS fold F0315_14195 PF00512 His Kinase A (phospho-acceptor) domain F0315_14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_14205 PF00072 Response regulator receiver domain F0315_14220 PF03481 Putative GTP-binding controlling metal-binding F0315_14220 PF01300 Telomere recombination F0315_14245 PF01116 Fructose-bisphosphate aldolase class-II F0315_14250 PF01979 Amidohydrolase family F0315_14255 PF03610 PTS system fructose IIA component F0315_14260 PF03613 PTS system mannose/fructose/sorbose family IID component F0315_14265 PF03609 PTS system sorbose-specific iic component F0315_14270 PF03830 PTS system sorbose subfamily IIB component F0315_14275 PF01380 SIS domain F0315_14280 PF08013 Tagatose 6 phosphate kinase F0315_14285 PF08220 DeoR-like helix-turn-helix domain F0315_14285 PF00455 DeoR C terminal sensor domain F0315_14290 PF00455 DeoR C terminal sensor domain F0315_14290 PF08220 DeoR-like helix-turn-helix domain F0315_14305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F0315_14305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F0315_14310 PF01022 Bacterial regulatory protein, arsR family F0315_14320 PF00990 Diguanylate cyclase, GGDEF domain F0315_14320 PF07694 5TMR of 5TMR-LYT F0315_14330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F0315_14345 PF13404 AsnC-type helix-turn-helix domain F0315_14345 PF01037 Lrp/AsnC ligand binding domain F0315_14350 PF00291 Pyridoxal-phosphate dependent enzyme F0315_14355 PF01343 Peptidase family S49 F0315_14355 PF08496 Peptidase family S49 N-terminal F0315_14360 PF00106 short chain dehydrogenase F0315_14365 PF03692 Putative zinc- or iron-chelating domain F0315_14370 PF03692 Putative zinc- or iron-chelating domain F0315_14375 PF13662 Toprim domain F0315_14375 PF02132 RecR protein F0315_14380 PF02575 YbaB/EbfC DNA-binding family F0315_14385 PF12170 DNA polymerase III tau subunit V interacting with alpha F0315_14385 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding F0315_14385 PF12169 DNA polymerase III subunits gamma and tau domain III F0315_14390 PF00156 Phosphoribosyl transferase domain F0315_14395 PF04304 Protein of unknown function (DUF454) F0315_14405 PF00072 Response regulator receiver domain F0315_14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_14410 PF03466 LysR substrate binding domain F0315_14415 PF00881 Nitroreductase family F0315_14420 PF00378 Enoyl-CoA hydratase/isomerase F0315_14420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F0315_14420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F0315_14425 PF00108 Thiolase, N-terminal domain F0315_14425 PF02803 Thiolase, C-terminal domain F0315_14430 PF08281 Sigma-70, region 4 F0315_14430 PF04542 Sigma-70 region 2 F0315_14440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F0315_14445 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F0315_14450 PF01451 Low molecular weight phosphotyrosine protein phosphatase F0315_14455 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F0315_14455 PF12557 Cob(I)alamin adenosyltransferase N terminal F0315_14460 PF05170 AsmA family F0315_14465 PF00485 Phosphoribulokinase / Uridine kinase family F0315_14475 PF10609 NUBPL iron-transfer P-loop NTPase F0315_14480 PF09334 tRNA synthetases class I (M) F0315_14480 PF01588 Putative tRNA binding domain F0315_14495 PF01048 Phosphorylase superfamily F0315_14500 PF00403 Heavy-metal-associated domain F0315_14510 PF07085 DRTGG domain F0315_14510 PF00571 CBS domain F0315_14510 PF03061 Thioesterase superfamily F0315_14510 PF00392 Bacterial regulatory proteins, gntR family F0315_14515 PF07694 5TMR of 5TMR-LYT F0315_14515 PF00990 Diguanylate cyclase, GGDEF domain F0315_14520 PF02391 MoaE protein F0315_14525 PF02597 ThiS family F0315_14530 PF01967 MoaC family F0315_14535 PF00994 Probable molybdopterin binding domain F0315_14540 PF04055 Radical SAM superfamily F0315_14540 PF06463 Molybdenum Cofactor Synthesis C F0315_14545 PF01933 Uncharacterised protein family UPF0052 F0315_14550 PF01627 Hpt domain F0315_14555 PF02954 Bacterial regulatory protein, Fis family F0315_14555 PF00072 Response regulator receiver domain F0315_14555 PF00158 Sigma-54 interaction domain F0315_14565 PF04851 Type III restriction enzyme, res subunit F0315_14565 PF02151 UvrB/uvrC motif F0315_14565 PF12344 Ultra-violet resistance protein B F0315_14565 PF17757 UvrB interaction domain F0315_14565 PF00271 Helicase conserved C-terminal domain F0315_14575 PF00589 Phage integrase family F0315_14575 PF13356 Arm DNA-binding domain F0315_14600 PF04002 RadC-like JAB domain F0315_14650 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F0315_14650 PF17287 POTRA domain F0315_14650 PF08479 POTRA domain, ShlB-type F0315_14740 PF00293 NUDIX domain F0315_14775 PF00583 Acetyltransferase (GNAT) family F0315_15120 PF13302 Acetyltransferase (GNAT) domain F0315_15160 PF02798 Glutathione S-transferase, N-terminal domain F0315_15160 PF00043 Glutathione S-transferase, C-terminal domain F0315_15175 PF13673 Acetyltransferase (GNAT) domain F0315_15270 PF08378 Nuclease-related domain F0315_15300 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH F0315_15460 PF02567 Phenazine biosynthesis-like protein F0315_15510 PF00583 Acetyltransferase (GNAT) family F0315_15580 PF04229 GrpB protein F0315_15610 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family F0315_15620 PF00892 EamA-like transporter family F0315_15625 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_15625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0315_15630 PF00239 Resolvase, N terminal domain F0315_15630 PF07508 Recombinase F0315_15630 PF13408 Recombinase zinc beta ribbon domain F0315_15655 PF13737 Transposase DDE domain F0315_15670 PF13438 Domain of unknown function (DUF4113) F0315_15670 PF00817 impB/mucB/samB family F0315_15670 PF11799 impB/mucB/samB family C-terminal domain F0315_15670 PF11798 IMS family HHH motif F0315_15675 PF00717 Peptidase S24-like F0315_15685 PF01039 Carboxyl transferase domain F0315_15685 PF17848 Acetyl-coA carboxylase zinc finger domain F0315_15690 PF03466 LysR substrate binding domain F0315_15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_15695 PF00376 MerR family regulatory protein F0315_15695 PF09278 MerR, DNA binding F0315_15700 PF00892 EamA-like transporter family F0315_15715 PF01797 Transposase IS200 like F0315_15730 PF02384 N-6 DNA Methylase F0315_15740 PF06250 YhcG PDDEXK nuclease domain F0315_15740 PF17761 DUF1016 N-terminal domain F0315_15770 PF00816 H-NS histone family F0315_15830 PF01867 CRISPR associated protein Cas1 F0315_15835 PF09827 CRISPR associated protein Cas2 F0315_15855 PF07859 alpha/beta hydrolase fold F0315_15865 PF13737 Transposase DDE domain F0315_15880 PF13657 HipA N-terminal domain F0315_15880 PF07804 HipA-like C-terminal domain F0315_15885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F0315_15885 PF07992 Pyridine nucleotide-disulphide oxidoreductase F0315_15905 PF04143 Sulphur transport F0315_15920 PF00873 AcrB/AcrD/AcrF family F0315_15930 PF00881 Nitroreductase family F0315_15935 PF03992 Antibiotic biosynthesis monooxygenase F0315_15940 PF03466 LysR substrate binding domain F0315_15940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_15950 PF06942 GlpM protein F0315_15960 PF00857 Isochorismatase family F0315_15975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0315_15975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0315_16000 PF02779 Transketolase, pyrimidine binding domain F0315_16000 PF02780 Transketolase, C-terminal domain F0315_16000 PF00456 Transketolase, thiamine diphosphate binding domain F0315_16005 PF00923 Transaldolase/Fructose-6-phosphate aldolase F0315_16015 PF04198 Putative sugar-binding domain F0315_16020 PF08329 Chitinase A, N-terminal domain F0315_16020 PF00704 Glycosyl hydrolases family 18 F0315_16025 PF00581 Rhodanese-like domain F0315_16035 PF00899 ThiF family F0315_16040 PF00994 Probable molybdopterin binding domain F0315_16040 PF03453 MoeA N-terminal region (domain I and II) F0315_16040 PF03454 MoeA C-terminal region (domain IV) F0315_16045 PF01227 GTP cyclohydrolase I F0315_16050 PF01625 Peptide methionine sulfoxide reductase F0315_16050 PF01641 SelR domain F0315_16055 PF01268 Formate--tetrahydrofolate ligase F0315_16060 PF01741 Large-conductance mechanosensitive channel, MscL F0315_16075 PF13419 Haloacid dehalogenase-like hydrolase F0315_16080 PF01272 Transcription elongation factor, GreA/GreB, C-term F0315_16080 PF14760 Rnk N-terminus F0315_16085 PF13419 Haloacid dehalogenase-like hydrolase F0315_16095 PF00266 Aminotransferase class-V F0315_16105 PF00005 ABC transporter F0315_16110 PF00528 Binding-protein-dependent transport system inner membrane component F0315_16115 PF00392 Bacterial regulatory proteins, gntR family F0315_16115 PF07702 UTRA domain F0315_16125 PF00854 POT family F0315_16150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_16155 PF00528 Binding-protein-dependent transport system inner membrane component F0315_16160 PF12911 N-terminal TM domain of oligopeptide transport permease C F0315_16160 PF00528 Binding-protein-dependent transport system inner membrane component F0315_16165 PF00005 ABC transporter F0315_16165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_16185 PF02798 Glutathione S-transferase, N-terminal domain F0315_16185 PF00043 Glutathione S-transferase, C-terminal domain F0315_16210 PF03061 Thioesterase superfamily F0315_16220 PF12793 Sugar transport-related sRNA regulator N-term F0315_16220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_16225 PF07715 TonB-dependent Receptor Plug Domain F0315_16225 PF00593 TonB dependent receptor F0315_16230 PF03466 LysR substrate binding domain F0315_16230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_16235 PF00583 Acetyltransferase (GNAT) family F0315_16235 PF13380 CoA binding domain F0315_16235 PF13607 Succinyl-CoA ligase like flavodoxin domain F0315_16245 PF01820 D-ala D-ala ligase N-terminus F0315_16245 PF07478 D-ala D-ala ligase C-terminus F0315_16255 PF01253 Translation initiation factor SUI1 F0315_16260 PF03701 Uncharacterised protein family (UPF0181) F0315_16275 PF00072 Response regulator receiver domain F0315_16275 PF00486 Transcriptional regulatory protein, C terminal F0315_16285 PF02233 NAD(P) transhydrogenase beta subunit F0315_16290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F0315_16290 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F0315_16290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F0315_16305 PF17158 Membrane-associated sensor, integral membrane domain F0315_16305 PF00990 Diguanylate cyclase, GGDEF domain F0315_16325 PF00990 Diguanylate cyclase, GGDEF domain F0315_16325 PF07694 5TMR of 5TMR-LYT F0315_16365 PF08274 PhnA Zinc-Ribbon F0315_16365 PF03831 PhnA domain F0315_16375 PF03741 Integral membrane protein TerC family F0315_16380 PF02872 5'-nucleotidase, C-terminal domain F0315_16380 PF00149 Calcineurin-like phosphoesterase F0315_16385 PF11398 Protein of unknown function (DUF2813) F0315_16390 PF06496 Protein of unknown function (DUF1097) F0315_16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_16395 PF03466 LysR substrate binding domain F0315_16400 PF01226 Formate/nitrite transporter F0315_16405 PF04264 YceI-like domain F0315_16410 PF01292 Prokaryotic cytochrome b561 F0315_16420 PF00563 EAL domain F0315_16420 PF10388 EAL-domain associated signalling protein domain F0315_16425 PF00672 HAMP domain F0315_16425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_16425 PF02743 Cache domain F0315_16430 PF01926 50S ribosome-binding GTPase F0315_16435 PF02492 CobW/HypB/UreG, nucleotide-binding domain F0315_16435 PF07683 Cobalamin synthesis protein cobW C-terminal domain F0315_16440 PF00654 Voltage gated chloride channel F0315_16450 PF00155 Aminotransferase class I and II F0315_16455 PF00072 Response regulator receiver domain F0315_16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_16460 PF13476 AAA domain F0315_16465 PF12320 Type 5 capsule protein repressor C-terminal domain F0315_16465 PF00149 Calcineurin-like phosphoesterase F0315_16470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0315_16470 PF00356 Bacterial regulatory proteins, lacI family F0315_16475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0315_16475 PF00381 PTS HPr component phosphorylation site F0315_16480 PF00294 pfkB family carbohydrate kinase F0315_16485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F0315_16485 PF02378 Phosphotransferase system, EIIC F0315_16490 PF18030 RimK PreATP-grasp domain F0315_16490 PF08443 RimK-like ATP-grasp domain F0315_16495 PF00155 Aminotransferase class I and II F0315_16505 PF03477 ATP cone domain F0315_16505 PF13597 Anaerobic ribonucleoside-triphosphate reductase F0315_16530 PF07969 Amidohydrolase family F0315_16540 PF02665 Nitrate reductase gamma subunit F0315_16545 PF02613 Nitrate reductase delta subunit F0315_16550 PF14711 Respiratory nitrate reductase beta C-terminal F0315_16550 PF13247 4Fe-4S dicluster domain F0315_16555 PF01568 Molydopterin dinucleotide binding domain F0315_16555 PF00384 Molybdopterin oxidoreductase F0315_16555 PF14710 Respiratory nitrate reductase alpha N-terminal F0315_16560 PF07690 Major Facilitator Superfamily F0315_16570 PF00072 Response regulator receiver domain F0315_16570 PF00196 Bacterial regulatory proteins, luxR family F0315_16575 PF03466 LysR substrate binding domain F0315_16575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_16580 PF13533 Biotin-lipoyl like F0315_16630 PF02378 Phosphotransferase system, EIIC F0315_16630 PF00367 phosphotransferase system, EIIB F0315_16640 PF08244 Glycosyl hydrolases family 32 C terminal F0315_16640 PF00251 Glycosyl hydrolases family 32 N-terminal domain F0315_16645 PF00294 pfkB family carbohydrate kinase F0315_16650 PF01266 FAD dependent oxidoreductase F0315_16650 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F0315_16655 PF00691 OmpA family F0315_16660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F0315_16660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F0315_16665 PF13419 Haloacid dehalogenase-like hydrolase F0315_16670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_16670 PF00672 HAMP domain F0315_16670 PF12729 Four helix bundle sensory module for signal transduction F0315_16675 PF03606 C4-dicarboxylate anaerobic carrier F0315_16680 PF03315 Serine dehydratase beta chain F0315_16680 PF03313 Serine dehydratase alpha chain F0315_16685 PF00474 Sodium:solute symporter family F0315_16700 PF00356 Bacterial regulatory proteins, lacI family F0315_16705 PF00072 Response regulator receiver domain F0315_16705 PF00196 Bacterial regulatory proteins, luxR family F0315_16710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_16710 PF07730 Histidine kinase F0315_16710 PF00672 HAMP domain F0315_16710 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term F0315_16715 PF12838 4Fe-4S dicluster domain F0315_16715 PF13187 4Fe-4S dicluster domain F0315_16735 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) F0315_16740 PF03264 NapC/NirT cytochrome c family, N-terminal region F0315_16750 PF01966 HD domain F0315_16755 PF00196 Bacterial regulatory proteins, luxR family F0315_16755 PF00072 Response regulator receiver domain F0315_16760 PF07730 Histidine kinase F0315_16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_16760 PF05231 MASE1 F0315_16765 PF07690 Major Facilitator Superfamily F0315_16775 PF00528 Binding-protein-dependent transport system inner membrane component F0315_16780 PF00005 ABC transporter F0315_16780 PF08402 TOBE domain F0315_16785 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus F0315_16795 PF02803 Thiolase, C-terminal domain F0315_16795 PF00108 Thiolase, N-terminal domain F0315_16800 PF00106 short chain dehydrogenase F0315_16805 PF07549 SecD/SecF GG Motif F0315_16805 PF02355 Protein export membrane protein F0315_16810 PF13721 SecD export protein N-terminal TM region F0315_16810 PF02355 Protein export membrane protein F0315_16810 PF07549 SecD/SecF GG Motif F0315_16825 PF17158 Membrane-associated sensor, integral membrane domain F0315_16825 PF00990 Diguanylate cyclase, GGDEF domain F0315_16830 PF00483 Nucleotidyl transferase F0315_16835 PF00704 Glycosyl hydrolases family 18 F0315_16835 PF06483 Chitinase C F0315_16840 PF00465 Iron-containing alcohol dehydrogenase F0315_16850 PF02954 Bacterial regulatory protein, Fis family F0315_16850 PF00072 Response regulator receiver domain F0315_16850 PF14532 Sigma-54 interaction domain F0315_16855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_16855 PF00512 His Kinase A (phospho-acceptor) domain F0315_16855 PF02743 Cache domain F0315_16865 PF07690 Major Facilitator Superfamily F0315_16870 PF00224 Pyruvate kinase, barrel domain F0315_16870 PF02887 Pyruvate kinase, alpha/beta domain F0315_16875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_16875 PF00512 His Kinase A (phospho-acceptor) domain F0315_16875 PF00072 Response regulator receiver domain F0315_16875 PF00672 HAMP domain F0315_16875 PF01627 Hpt domain F0315_16880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F0315_16885 PF02142 MGS-like domain F0315_16890 PF00857 Isochorismatase family F0315_16900 PF01219 Prokaryotic diacylglycerol kinase F0315_16915 PF00580 UvrD/REP helicase N-terminal domain F0315_16915 PF13361 UvrD-like helicase C-terminal domain F0315_16915 PF12462 DNA helicase IV / RNA helicase N terminal F0315_16920 PF12805 FUSC-like inner membrane protein yccS F0315_16925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_16925 PF00072 Response regulator receiver domain F0315_16925 PF08448 PAS fold F0315_16925 PF13188 PAS domain F0315_16925 PF00512 His Kinase A (phospho-acceptor) domain F0315_16950 PF03459 TOBE domain F0315_16950 PF00005 ABC transporter F0315_16955 PF00528 Binding-protein-dependent transport system inner membrane component F0315_16965 PF07685 CobB/CobQ-like glutamine amidotransferase domain F0315_16965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F0315_16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_16990 PF00512 His Kinase A (phospho-acceptor) domain F0315_16990 PF00072 Response regulator receiver domain F0315_16990 PF09308 LuxQ, periplasmic F0315_16995 PF13407 Periplasmic binding protein domain F0315_17005 PF01541 GIY-YIG catalytic domain F0315_17010 PF04337 Protein of unknown function, DUF480 F0315_17020 PF04363 Protein of unknown function (DUF496) F0315_17035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0315_17035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F0315_17040 PF00230 Major intrinsic protein F0315_17045 PF01266 FAD dependent oxidoreductase F0315_17045 PF04324 BFD-like [2Fe-2S] binding domain F0315_17050 PF00890 FAD binding domain F0315_17055 PF02754 Cysteine-rich domain F0315_17055 PF13183 4Fe-4S dicluster domain F0315_17060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F0315_17060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F0315_17065 PF00085 Thioredoxin F0315_17070 PF07690 Major Facilitator Superfamily F0315_17095 PF00528 Binding-protein-dependent transport system inner membrane component F0315_17100 PF00528 Binding-protein-dependent transport system inner membrane component F0315_17105 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0315_17110 PF00005 ABC transporter F0315_17120 PF05762 VWA domain containing CoxE-like protein F0315_17125 PF07728 AAA domain (dynein-related subfamily) F0315_17125 PF17868 AAA lid domain F0315_17125 PF12592 Protein of unknown function (DUF3763) F0315_17130 PF00293 NUDIX domain F0315_17135 PF01212 Beta-eliminating lyase F0315_17140 PF00034 Cytochrome c F0315_17145 PF00440 Bacterial regulatory proteins, tetR family F0315_17145 PF08361 MAATS-type transcriptional repressor, C-terminal region F0315_17150 PF00271 Helicase conserved C-terminal domain F0315_17150 PF00270 DEAD/DEAH box helicase F0315_17160 PF03222 Tryptophan/tyrosine permease family F0315_17165 PF12729 Four helix bundle sensory module for signal transduction F0315_17165 PF00672 HAMP domain F0315_17165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_17170 PF16363 GDP-mannose 4,6 dehydratase F0315_17175 PF03746 LamB/YcsF family F0315_17180 PF02682 Carboxyltransferase domain, subdomain C and D F0315_17185 PF02626 Carboxyltransferase domain, subdomain A and B F0315_17195 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F0315_17195 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F0315_17205 PF00005 ABC transporter F0315_17210 PF13472 GDSL-like Lipase/Acylhydrolase family F0315_17215 PF12241 Trans-2-enoyl-CoA reductase catalytic region F0315_17215 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F0315_17215 PF07055 Enoyl reductase FAD binding domain F0315_17220 PF00563 EAL domain F0315_17220 PF00990 Diguanylate cyclase, GGDEF domain F0315_17220 PF00498 FHA domain F0315_17230 PF00684 DnaJ central domain F0315_17230 PF00226 DnaJ domain F0315_17230 PF01556 DnaJ C terminal domain F0315_17250 PF13419 Haloacid dehalogenase-like hydrolase F0315_17265 PF00294 pfkB family carbohydrate kinase F0315_17270 PF00884 Sulfatase F0315_17280 PF03880 DbpA RNA binding domain F0315_17280 PF00270 DEAD/DEAH box helicase F0315_17280 PF00271 Helicase conserved C-terminal domain F0315_17285 PF00773 RNB domain F0315_17285 PF00575 S1 RNA binding domain F0315_17285 PF08206 Ribonuclease B OB domain F0315_17295 PF12849 PBP superfamily domain F0315_17300 PF01575 MaoC like domain F0315_17305 PF04244 Deoxyribodipyrimidine photo-lyase-related protein F0315_17310 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading F0315_17310 PF18416 N-acetylglucosamine binding protein domain 2 F0315_17345 PF00873 AcrB/AcrD/AcrF family F0315_17360 PF00512 His Kinase A (phospho-acceptor) domain F0315_17360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_17360 PF00672 HAMP domain F0315_17360 PF14827 Double sensory domain of two-component sensor kinase F0315_17360 PF13426 PAS domain F0315_17365 PF00486 Transcriptional regulatory protein, C terminal F0315_17365 PF00072 Response regulator receiver domain F0315_17385 PF00455 DeoR C terminal sensor domain F0315_17385 PF08220 DeoR-like helix-turn-helix domain F0315_17390 PF03611 PTS system sugar-specific permease component F0315_17395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0315_17400 PF00596 Class II Aldolase and Adducin N-terminal domain F0315_17410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F0315_17415 PF01261 Xylose isomerase-like TIM barrel F0315_17430 PF02656 Domain of unknown function (DUF202) F0315_17435 PF01380 SIS domain F0315_17435 PF01418 Helix-turn-helix domain, rpiR family F0315_17440 PF00367 phosphotransferase system, EIIB F0315_17440 PF02378 Phosphotransferase system, EIIC F0315_17445 PF13580 SIS domain F0315_17460 PF00871 Acetokinase family F0315_17475 PF00005 ABC transporter F0315_17480 PF01032 FecCD transport family F0315_17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_17490 PF03466 LysR substrate binding domain F0315_17495 PF00593 TonB dependent receptor F0315_17495 PF07715 TonB-dependent Receptor Plug Domain F0315_17500 PF12833 Helix-turn-helix domain F0315_17505 PF00005 ABC transporter F0315_17510 PF01032 FecCD transport family F0315_17515 PF01032 FecCD transport family F0315_17535 PF00801 PKD domain F0315_17535 PF05547 Immune inhibitor A peptidase M6 F0315_17540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_17540 PF00672 HAMP domain F0315_17540 PF12729 Four helix bundle sensory module for signal transduction F0315_17545 PF07968 Leukocidin/Hemolysin toxin family F0315_17545 PF12563 Hemolytic toxin N terminal F0315_17545 PF16458 Beta-prism lectin F0315_17550 PF00657 GDSL-like Lipase/Acylhydrolase F0315_17560 PF07690 Major Facilitator Superfamily F0315_17565 PF03553 Na+/H+ antiporter family F0315_17575 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0315_17575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_17575 PF00512 His Kinase A (phospho-acceptor) domain F0315_17580 PF11849 Domain of unknown function (DUF3369) F0315_17585 PF01467 Cytidylyltransferase-like F0315_17590 PF02540 NAD synthase F0315_17595 PF03605 Anaerobic c4-dicarboxylate membrane transporter F0315_17600 PF00270 DEAD/DEAH box helicase F0315_17600 PF00271 Helicase conserved C-terminal domain F0315_17605 PF00478 IMP dehydrogenase / GMP reductase domain F0315_17625 PF03222 Tryptophan/tyrosine permease family F0315_17630 PF00005 ABC transporter F0315_17630 PF16326 ABC transporter C-terminal domain F0315_17630 PF12848 ABC transporter F0315_17635 PF00042 Globin F0315_17635 PF00175 Oxidoreductase NAD-binding domain F0315_17635 PF00970 Oxidoreductase FAD-binding domain F0315_17640 PF01327 Polypeptide deformylase F0315_17645 PF12561 ToxR activated gene A lipoprotein domain F0315_17645 PF00041 Fibronectin type III domain F0315_17650 PF01266 FAD dependent oxidoreductase F0315_17665 PF00072 Response regulator receiver domain F0315_17665 PF02954 Bacterial regulatory protein, Fis family F0315_17665 PF00158 Sigma-54 interaction domain F0315_17670 PF02743 Cache domain F0315_17670 PF00512 His Kinase A (phospho-acceptor) domain F0315_17670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_17685 PF07690 Major Facilitator Superfamily F0315_17690 PF03009 Glycerophosphoryl diester phosphodiesterase family F0315_17700 PF01048 Phosphorylase superfamily F0315_17705 PF04973 Nicotinamide mononucleotide transporter F0315_17710 PF00356 Bacterial regulatory proteins, lacI family F0315_17715 PF00294 pfkB family carbohydrate kinase F0315_17720 PF13407 Periplasmic binding protein domain F0315_17725 PF02653 Branched-chain amino acid transport system / permease component F0315_17730 PF00005 ABC transporter F0315_17735 PF05025 RbsD / FucU transport protein family F0315_17755 PF16671 Actin cross-linking domain F0315_17755 PF04717 Type VI secretion system, phage-baseplate injector F0315_17790 PF00004 ATPase family associated with various cellular activities (AAA) F0315_17790 PF07724 AAA domain (Cdc48 subfamily) F0315_17790 PF17871 AAA lid domain F0315_17790 PF10431 C-terminal, D2-small domain, of ClpB protein F0315_17850 PF00849 RNA pseudouridylate synthase F0315_17855 PF00916 Sulfate permease family F0315_17855 PF01740 STAS domain F0315_17860 PF13419 Haloacid dehalogenase-like hydrolase F0315_17865 PF00563 EAL domain F0315_17865 PF00196 Bacterial regulatory proteins, luxR family F0315_17870 PF00581 Rhodanese-like domain F0315_17875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F0315_17875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F0315_17880 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F0315_17880 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain F0315_17895 PF07504 Fungalysin/Thermolysin Propeptide Motif F0315_17895 PF01447 Thermolysin metallopeptidase, catalytic domain F0315_17895 PF02868 Thermolysin metallopeptidase, alpha-helical domain F0315_17895 PF01483 Proprotein convertase P-domain F0315_17915 PF02001 Protein of unknown function DUF134 F0315_17930 PF00375 Sodium:dicarboxylate symporter family F0315_17935 PF07670 Nucleoside recognition F0315_17940 PF07670 Nucleoside recognition F0315_17945 PF03600 Citrate transporter F0315_17955 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F0315_17955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F0315_17960 PF00730 HhH-GPD superfamily base excision DNA repair protein F0315_17960 PF06029 AlkA N-terminal domain F0315_17965 PF07681 DoxX F0315_17970 PF03466 LysR substrate binding domain F0315_17970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_17990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F0315_18000 PF07148 Maltose operon periplasmic protein precursor (MalM) F0315_18005 PF02264 LamB porin F0315_18010 PF00128 Alpha amylase, catalytic domain F0315_18010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F0315_18020 PF12729 Four helix bundle sensory module for signal transduction F0315_18020 PF00672 HAMP domain F0315_18020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_18030 PF00672 HAMP domain F0315_18030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_18045 PF00462 Glutaredoxin F0315_18050 PF12852 Cupin F0315_18050 PF12833 Helix-turn-helix domain F0315_18055 PF00270 DEAD/DEAH box helicase F0315_18055 PF00271 Helicase conserved C-terminal domain F0315_18065 PF03786 D-mannonate dehydratase (UxuA) F0315_18070 PF07729 FCD domain F0315_18070 PF00392 Bacterial regulatory proteins, gntR family F0315_18075 PF03480 Bacterial extracellular solute-binding protein, family 7 F0315_18080 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F0315_18085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F0315_18090 PF08125 Mannitol dehydrogenase C-terminal domain F0315_18090 PF01232 Mannitol dehydrogenase Rossmann domain F0315_18095 PF02614 Glucuronate isomerase F0315_18100 PF00294 pfkB family carbohydrate kinase F0315_18105 PF01081 KDPG and KHG aldolase F0315_18110 PF10688 Bacterial inner membrane protein F0315_18120 PF00664 ABC transporter transmembrane region F0315_18120 PF00005 ABC transporter F0315_18130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F0315_18140 PF01810 LysE type translocator F0315_18145 PF12833 Helix-turn-helix domain F0315_18160 PF01557 Fumarylacetoacetate (FAA) hydrolase family F0315_18165 PF01047 MarR family F0315_18170 PF02566 OsmC-like protein F0315_18175 PF13609 Gram-negative porin F0315_18180 PF00892 EamA-like transporter family F0315_18185 PF00462 Glutaredoxin F0315_18200 PF07690 Major Facilitator Superfamily F0315_18205 PF03466 LysR substrate binding domain F0315_18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_18210 PF01590 GAF domain F0315_18210 PF00990 Diguanylate cyclase, GGDEF domain F0315_18210 PF00360 Phytochrome region F0315_18210 PF00563 EAL domain F0315_18215 PF08525 Opacity-associated protein A N-terminal motif F0315_18215 PF01476 LysM domain F0315_18215 PF01551 Peptidase family M23 F0315_18230 PF00916 Sulfate permease family F0315_18230 PF01740 STAS domain F0315_18250 PF00563 EAL domain F0315_18250 PF03707 Bacterial signalling protein N terminal repeat F0315_18250 PF00990 Diguanylate cyclase, GGDEF domain F0315_18255 PF00005 ABC transporter F0315_18260 PF00528 Binding-protein-dependent transport system inner membrane component F0315_18265 PF00528 Binding-protein-dependent transport system inner membrane component F0315_18270 PF12849 PBP superfamily domain F0315_18275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_18275 PF12729 Four helix bundle sensory module for signal transduction F0315_18275 PF00672 HAMP domain F0315_18295 PF00593 TonB dependent receptor F0315_18295 PF07715 TonB-dependent Receptor Plug Domain F0315_18300 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F0315_18300 PF00326 Prolyl oligopeptidase family F0315_18305 PF00270 DEAD/DEAH box helicase F0315_18305 PF00271 Helicase conserved C-terminal domain F0315_18315 PF17969 L,D-transpeptidase C-terminal domain F0315_18315 PF03734 L,D-transpeptidase catalytic domain F0315_18315 PF01476 LysM domain F0315_18320 PF03441 FAD binding domain of DNA photolyase F0315_18320 PF00875 DNA photolyase F0315_18325 PF13411 MerR HTH family regulatory protein F0315_18330 PF08349 Protein of unknown function (DUF1722) F0315_18335 PF01048 Phosphorylase superfamily F0315_18350 PF00990 Diguanylate cyclase, GGDEF domain F0315_18365 PF07238 PilZ domain F0315_18365 PF12945 Flagellar protein YcgR F0315_18370 PF03616 Sodium/glutamate symporter F0315_18390 PF02630 SCO1/SenC F0315_18400 PF00375 Sodium:dicarboxylate symporter family F0315_18405 PF01569 PAP2 superfamily F0315_18425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_18425 PF02743 Cache domain F0315_18425 PF00672 HAMP domain F0315_18440 PF00704 Glycosyl hydrolases family 18 F0315_18440 PF08329 Chitinase A, N-terminal domain F0315_18445 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F0315_18450 PF00939 Sodium:sulfate symporter transmembrane region F0315_18460 PF01168 Alanine racemase, N-terminal domain F0315_18460 PF00842 Alanine racemase, C-terminal domain F0315_18460 PF01757 Acyltransferase family F0315_18485 PF16671 Actin cross-linking domain F0315_18485 PF04717 Type VI secretion system, phage-baseplate injector F0315_18490 PF05638 Type VI secretion system effector, Hcp F0315_18495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F0315_18495 PF02806 Alpha amylase, C-terminal all-beta domain F0315_18495 PF00128 Alpha amylase, catalytic domain F0315_18500 PF02446 4-alpha-glucanotransferase F0315_18505 PF00343 Carbohydrate phosphorylase F0315_18510 PF00196 Bacterial regulatory proteins, luxR family F0315_18510 PF17874 MalT-like TPR region F0315_18515 PF10928 Protein of unknown function (DUF2810) F0315_18520 PF17200 Single Cache domain 2 F0315_18520 PF00672 HAMP domain F0315_18520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_18525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F0315_18525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F0315_18530 PF01709 Transcriptional regulator F0315_18545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_18545 PF00005 ABC transporter F0315_18550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_18550 PF00005 ABC transporter F0315_18570 PF18607 ParA helix turn helix domain F0315_18570 PF13614 AAA domain F0315_18575 PF02195 ParB-like nuclease domain F0315_18575 PF08775 ParB family F0315_18580 PF13416 Bacterial extracellular solute-binding protein F0315_18585 PF13718 GNAT acetyltransferase 2 F0315_18585 PF05127 Helicase F0315_18595 PF00501 AMP-binding enzyme F0315_18615 PF00486 Transcriptional regulatory protein, C terminal F0315_18615 PF00072 Response regulator receiver domain F0315_18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_18620 PF08521 Two-component sensor kinase N-terminal F0315_18620 PF00512 His Kinase A (phospho-acceptor) domain F0315_18625 PF08019 Phosphoethanolamine transferase EptA/EptB F0315_18625 PF00884 Sulfatase F0315_18630 PF00005 ABC transporter F0315_18630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_18635 PF00528 Binding-protein-dependent transport system inner membrane component F0315_18635 PF12911 N-terminal TM domain of oligopeptide transport permease C F0315_18640 PF00528 Binding-protein-dependent transport system inner membrane component F0315_18655 PF00072 Response regulator receiver domain F0315_18660 PF09078 CheY binding F0315_18660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_18660 PF01627 Hpt domain F0315_18660 PF02895 Signal transducing histidine kinase, homodimeric domain F0315_18660 PF01584 CheW-like domain F0315_18665 PF01584 CheW-like domain F0315_18670 PF01584 CheW-like domain F0315_18675 PF02203 Tar ligand binding domain homologue F0315_18675 PF00672 HAMP domain F0315_18675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_18680 PF01739 CheR methyltransferase, SAM binding domain F0315_18680 PF03705 CheR methyltransferase, all-alpha domain F0315_18685 PF03975 CheD chemotactic sensory transduction F0315_18690 PF00072 Response regulator receiver domain F0315_18690 PF01339 CheB methylesterase F0315_18695 PF00672 HAMP domain F0315_18695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_18695 PF02743 Cache domain F0315_18705 PF00072 Response regulator receiver domain F0315_18705 PF00486 Transcriptional regulatory protein, C terminal F0315_18710 PF03437 BtpA family F0315_18715 PF13407 Periplasmic binding protein domain F0315_18720 PF00005 ABC transporter F0315_18725 PF02653 Branched-chain amino acid transport system / permease component F0315_18730 PF02653 Branched-chain amino acid transport system / permease component F0315_18740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F0315_18740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F0315_18745 PF00455 DeoR C terminal sensor domain F0315_18745 PF08220 DeoR-like helix-turn-helix domain F0315_18760 PF00664 ABC transporter transmembrane region F0315_18760 PF00005 ABC transporter F0315_18760 PF03412 Peptidase C39 family F0315_18775 PF00529 HlyD membrane-fusion protein of T1SS F0315_18780 PF01243 Pyridoxamine 5'-phosphate oxidase F0315_18780 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F0315_18785 PF00196 Bacterial regulatory proteins, luxR family F0315_18785 PF00072 Response regulator receiver domain F0315_18790 PF03781 Sulfatase-modifying factor enzyme 1 F0315_18800 PF12833 Helix-turn-helix domain F0315_18805 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F0315_18805 PF14850 DNA-binding domain of Proline dehydrogenase F0315_18805 PF00171 Aldehyde dehydrogenase family F0315_18805 PF01619 Proline dehydrogenase F0315_18815 PF00474 Sodium:solute symporter family F0315_18825 PF01037 Lrp/AsnC ligand binding domain F0315_18830 PF00171 Aldehyde dehydrogenase family F0315_18845 PF03176 MMPL family F0315_18850 PF00196 Bacterial regulatory proteins, luxR family F0315_18850 PF03472 Autoinducer binding domain F0315_18860 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F0315_18860 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F0315_18860 PF01276 Orn/Lys/Arg decarboxylase, major domain F0315_18865 PF13520 Amino acid permease F0315_18875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F0315_18885 PF04013 Putative SAM-dependent RNA methyltransferase F0315_18890 PF03466 LysR substrate binding domain F0315_18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_18895 PF00106 short chain dehydrogenase F0315_18900 PF12729 Four helix bundle sensory module for signal transduction F0315_18900 PF00672 HAMP domain F0315_18900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_18905 PF03466 LysR substrate binding domain F0315_18910 PF13460 NAD(P)H-binding F0315_18930 PF03358 NADPH-dependent FMN reductase F0315_18935 PF03466 LysR substrate binding domain F0315_18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_18950 PF00892 EamA-like transporter family F0315_18975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F0315_18980 PF05068 Mannitol repressor F0315_18985 PF01232 Mannitol dehydrogenase Rossmann domain F0315_18985 PF08125 Mannitol dehydrogenase C-terminal domain F0315_18990 PF02378 Phosphotransferase system, EIIC F0315_18990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F0315_18990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F0315_18995 PF13006 Insertion element 4 transposase N-terminal F0315_18995 PF01609 Transposase DDE domain F0315_19000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F0315_19000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F0315_19000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F0315_19000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F0315_19005 PF00528 Binding-protein-dependent transport system inner membrane component F0315_19010 PF00497 Bacterial extracellular solute-binding proteins, family 3 F0315_19015 PF00528 Binding-protein-dependent transport system inner membrane component F0315_19020 PF00005 ABC transporter F0315_19025 PF00793 DAHP synthetase I family F0315_19030 PF01554 MatE F0315_19035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_19035 PF08447 PAS fold F0315_19045 PF01070 FMN-dependent dehydrogenase F0315_19050 PF02652 L-lactate permease F0315_19055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_19055 PF03466 LysR substrate binding domain F0315_19060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_19060 PF00005 ABC transporter F0315_19070 PF13654 AAA domain F0315_19070 PF05362 Lon protease (S16) C-terminal proteolytic domain F0315_19075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_19075 PF12729 Four helix bundle sensory module for signal transduction F0315_19075 PF00672 HAMP domain F0315_19085 PF07690 Major Facilitator Superfamily F0315_19095 PF06865 Pyrimidine/purine nucleoside phosphorylase F0315_19100 PF05726 Pirin C-terminal cupin domain F0315_19100 PF02678 Pirin F0315_19110 PF00563 EAL domain F0315_19110 PF03707 Bacterial signalling protein N terminal repeat F0315_19110 PF00990 Diguanylate cyclase, GGDEF domain F0315_19115 PF03466 LysR substrate binding domain F0315_19115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_19135 PF00563 EAL domain F0315_19135 PF00990 Diguanylate cyclase, GGDEF domain F0315_19135 PF03707 Bacterial signalling protein N terminal repeat F0315_19150 PF00990 Diguanylate cyclase, GGDEF domain F0315_19155 PF01047 MarR family F0315_19160 PF01584 CheW-like domain F0315_19160 PF00072 Response regulator receiver domain F0315_19170 PF00196 Bacterial regulatory proteins, luxR family F0315_19175 PF01906 Putative heavy-metal-binding F0315_19190 PF13302 Acetyltransferase (GNAT) domain F0315_19195 PF00005 ABC transporter F0315_19195 PF08402 TOBE domain F0315_19200 PF01547 Bacterial extracellular solute-binding protein F0315_19205 PF00528 Binding-protein-dependent transport system inner membrane component F0315_19205 PF14785 Maltose transport system permease protein MalF P2 domain F0315_19210 PF00528 Binding-protein-dependent transport system inner membrane component F0315_19225 PF00455 DeoR C terminal sensor domain F0315_19225 PF08220 DeoR-like helix-turn-helix domain F0315_19230 PF00990 Diguanylate cyclase, GGDEF domain F0315_19230 PF08448 PAS fold F0315_19255 PF00313 'Cold-shock' DNA-binding domain F0315_19260 PF05661 Protein of unknown function (DUF808) F0315_19265 PF05958 tRNA (Uracil-5-)-methyltransferase F0315_19270 PF01979 Amidohydrolase family F0315_19275 PF00111 2Fe-2S iron-sulfur cluster binding domain F0315_19275 PF03476 MOSC N-terminal beta barrel domain F0315_19275 PF03473 MOSC domain F0315_19275 PF00111 2Fe-2S iron-sulfur cluster binding domain F0315_19275 PF03473 MOSC domain F0315_19275 PF03476 MOSC N-terminal beta barrel domain F0315_19280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_19280 PF02743 Cache domain F0315_19280 PF00672 HAMP domain F0315_19310 PF00005 ABC transporter F0315_19315 PF01032 FecCD transport family F0315_19320 PF01497 Periplasmic binding protein F0315_19325 PF02472 Biopolymer transport protein ExbD/TolR F0315_19330 PF01618 MotA/TolQ/ExbB proton channel family F0315_19335 PF03544 Gram-negative bacterial TonB protein C-terminal F0315_19340 PF04055 Radical SAM superfamily F0315_19345 PF06228 Haem utilisation ChuX/HutX F0315_19350 PF01243 Pyridoxamine 5'-phosphate oxidase F0315_19355 PF00672 HAMP domain F0315_19355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_19360 PF00034 Cytochrome c F0315_19360 PF03150 Di-haem cytochrome c peroxidase F0315_19365 PF05651 Putative sugar diacid recognition F0315_19365 PF17853 GGDEF-like domain F0315_19365 PF13556 PucR C-terminal helix-turn-helix domain F0315_19370 PF02447 GntP family permease F0315_19375 PF02595 Glycerate kinase family F0315_19400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F0315_19400 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F0315_19405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F0315_19410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F0315_19410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F0315_19435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F0315_19440 PF03466 LysR substrate binding domain F0315_19440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F0315_19445 PF01053 Cys/Met metabolism PLP-dependent enzyme F0315_19450 PF00155 Aminotransferase class I and II F0315_19455 PF00107 Zinc-binding dehydrogenase F0315_19455 PF08240 Alcohol dehydrogenase GroES-like domain F0315_19475 PF00589 Phage integrase family F0315_19475 PF12167 Arm DNA-binding domain F0315_19490 PF01381 Helix-turn-helix F0315_19490 PF00717 Peptidase S24-like F0315_19505 PF03354 Phage Terminase F0315_19650 PF00528 Binding-protein-dependent transport system inner membrane component F0315_19655 PF08402 TOBE domain F0315_19655 PF00005 ABC transporter F0315_19660 PF03009 Glycerophosphoryl diester phosphodiesterase family F0315_19665 PF00480 ROK family F0315_19710 PF00107 Zinc-binding dehydrogenase F0315_19710 PF08240 Alcohol dehydrogenase GroES-like domain F0315_19720 PF00313 'Cold-shock' DNA-binding domain F0315_19725 PF00575 S1 RNA binding domain F0315_19725 PF08461 Ribonuclease R winged-helix domain F0315_19725 PF00773 RNB domain F0315_19725 PF08206 Ribonuclease B OB domain F0315_19725 PF17876 Cold shock domain F0315_19730 PF00768 D-alanyl-D-alanine carboxypeptidase F0315_19740 PF03922 OmpW family F0315_19750 PF01212 Beta-eliminating lyase F0315_19760 PF12843 Putative quorum-sensing-regulated virulence factor F0315_19770 PF00563 EAL domain F0315_19770 PF00990 Diguanylate cyclase, GGDEF domain F0315_19770 PF08448 PAS fold F0315_19775 PF00313 'Cold-shock' DNA-binding domain F0315_19795 PF07584 Aerotolerance regulator N-terminal F0315_19795 PF13519 von Willebrand factor type A domain F0315_19810 PF01882 Protein of unknown function DUF58 F0315_19815 PF17863 AAA lid domain F0315_19815 PF07726 ATPase family associated with various cellular activities (AAA) F0315_19820 PF00672 HAMP domain F0315_19820 PF02743 Cache domain F0315_19820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_19835 PF01773 Na+ dependent nucleoside transporter N-terminus F0315_19835 PF07662 Na+ dependent nucleoside transporter C-terminus F0315_19835 PF07670 Nucleoside recognition F0315_19840 PF07687 Peptidase dimerisation domain F0315_19840 PF01546 Peptidase family M20/M25/M40 F0315_19850 PF00158 Sigma-54 interaction domain F0315_19850 PF01590 GAF domain F0315_19855 PF00175 Oxidoreductase NAD-binding domain F0315_19855 PF00042 Globin F0315_19855 PF00970 Oxidoreductase FAD-binding domain F0315_19860 PF00313 'Cold-shock' DNA-binding domain F0315_19865 PF03889 Alternative ribosome-rescue factor A F0315_19880 PF00072 Response regulator receiver domain F0315_19890 PF03853 YjeF-related protein N-terminus F0315_19890 PF01256 Carbohydrate kinase F0315_19895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F0315_19895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F0315_19905 PF07885 Ion channel F0315_19915 PF04151 Bacterial pre-peptidase C-terminal domain F0315_19915 PF07504 Fungalysin/Thermolysin Propeptide Motif F0315_19915 PF03413 Peptidase propeptide and YPEB domain F0315_19915 PF01447 Thermolysin metallopeptidase, catalytic domain F0315_19915 PF02868 Thermolysin metallopeptidase, alpha-helical domain F0315_19920 PF00128 Alpha amylase, catalytic domain F0315_19925 PF00248 Aldo/keto reductase family F0315_19935 PF00005 ABC transporter F0315_19940 PF00005 ABC transporter F0315_19940 PF02687 FtsX-like permease family F0315_19940 PF12704 MacB-like periplasmic core domain F0315_19955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F0315_19955 PF07694 5TMR of 5TMR-LYT F0315_19955 PF06580 Histidine kinase F0315_19955 PF13492 GAF domain F0315_19960 PF00072 Response regulator receiver domain F0315_19960 PF04397 LytTr DNA-binding domain F0315_19970 PF00990 Diguanylate cyclase, GGDEF domain F0315_19975 PF13520 Amino acid permease F0315_19990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F0315_19990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F0315_19995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F0315_20000 PF02566 OsmC-like protein F0315_20005 PF01595 Cyclin M transmembrane N-terminal domain F0315_20005 PF00571 CBS domain F0315_20005 PF03471 Transporter associated domain F0315_20010 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal F0315_20010 PF00132 Bacterial transferase hexapeptide (six repeats) F0315_20010 PF14602 Hexapeptide repeat of succinyl-transferase F0315_20015 PF00892 EamA-like transporter family F0315_20040 PF00501 AMP-binding enzyme F0315_20040 PF13193 AMP-binding enzyme C-terminal domain F0315_20045 PF00351 Biopterin-dependent aromatic amino acid hydroxylase F0315_20050 PF01329 Pterin 4 alpha carbinolamine dehydratase F0315_20060 PF01554 MatE F0315_20070 PF01769 Divalent cation transporter F0315_20070 PF03448 MgtE intracellular N domain F0315_20070 PF00571 CBS domain F0315_20080 PF17810 Arginine decarboxylase helical bundle domain F0315_20080 PF17944 Arginine decarboxylase C-terminal helical extension F0315_20080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F0315_20085 PF00491 Arginase family F0315_20095 PF04962 KduI/IolB family F0315_20100 PF00294 pfkB family carbohydrate kinase F0315_20105 PF01081 KDPG and KHG aldolase F0315_20110 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain F0315_20110 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain F0315_20120 PF07470 Glycosyl Hydrolase Family 88 F0315_20125 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain F0315_20125 PF17386 Lacto-N-biose phosphorylase C-terminal domain F0315_20125 PF17385 Lacto-N-biose phosphorylase central domain F0315_20130 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain F0315_20130 PF02278 Polysaccharide lyase family 8, super-sandwich domain F0315_20130 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain F0315_20135 PF03707 Bacterial signalling protein N terminal repeat F0315_20135 PF00990 Diguanylate cyclase, GGDEF domain F0315_20135 PF00563 EAL domain F0315_20140 PF00884 Sulfatase F0315_20140 PF16385 Domain of unknown function F0315_20145 PF00884 Sulfatase F0315_20150 PF04055 Radical SAM superfamily F0315_20150 PF13186 Iron-sulfur cluster-binding domain F0315_20160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F0315_20165 PF00528 Binding-protein-dependent transport system inner membrane component F0315_20170 PF12911 N-terminal TM domain of oligopeptide transport permease C F0315_20170 PF00528 Binding-protein-dependent transport system inner membrane component F0315_20175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F0315_20175 PF00005 ABC transporter F0315_20180 PF01614 Bacterial transcriptional regulator F0315_20180 PF09339 IclR helix-turn-helix domain F0315_20185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F0315_20185 PF02743 Cache domain F0315_20185 PF00672 HAMP domain F0315_20195 PF00768 D-alanyl-D-alanine carboxypeptidase F0315_20195 PF07943 Penicillin-binding protein 5, C-terminal domain F0315_20210 PF00194 Eukaryotic-type carbonic anhydrase F0315_20215 PF02347 Glycine cleavage system P-protein F0315_20220 PF01597 Glycine cleavage H-protein F0315_20225 PF00464 Serine hydroxymethyltransferase F0315_20235 PF08669 Glycine cleavage T-protein C-terminal barrel domain F0315_20235 PF01571 Aminomethyltransferase folate-binding domain F0315_20240 PF03129 Anticodon binding domain F0315_20240 PF02824 TGS domain F0315_20240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F0315_20240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F0315_20245 PF05198 Translation initiation factor IF-3, N-terminal domain F0315_20245 PF00707 Translation initiation factor IF-3, C-terminal domain F0315_20250 PF01632 Ribosomal protein L35 F0315_20255 PF00453 Ribosomal protein L20 F0315_20260 PF00589 Phage integrase family F0315_20260 PF13495 Phage integrase, N-terminal SAM-like domain F0315_20270 PF13673 Acetyltransferase (GNAT) domain F0315_20315 PF00583 Acetyltransferase (GNAT) family F0315_20420 PF00293 NUDIX domain F0315_20465 PF00583 Acetyltransferase (GNAT) family