locus-tag class description VCSRO5_0001 PF00258 Flavodoxin VCSRO5_0002 PF01926 50S ribosome-binding GTPase VCSRO5_0002 PF12631 MnmE helical domain VCSRO5_0002 PF10396 GTP-binding protein TrmE N-terminus VCSRO5_0003 PF02096 60Kd inner membrane protein VCSRO5_0003 PF14849 YidC periplasmic domain VCSRO5_0004 PF00825 Ribonuclease P VCSRO5_0005 PF00468 Ribosomal protein L34 VCSRO5_0006 PF00005 ABC transporter VCSRO5_0007 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_0008 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_0009 PF00308 Bacterial dnaA protein VCSRO5_0009 PF08299 Bacterial dnaA protein helix-turn-helix VCSRO5_0009 PF11638 DnaA N-terminal domain VCSRO5_0010 PF00712 DNA polymerase III beta subunit, N-terminal domain VCSRO5_0010 PF02767 DNA polymerase III beta subunit, central domain VCSRO5_0010 PF02768 DNA polymerase III beta subunit, C-terminal domain VCSRO5_0011 PF02463 RecF/RecN/SMC N terminal domain VCSRO5_0012 PF01751 Toprim domain VCSRO5_0012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0012 PF00204 DNA gyrase B VCSRO5_0012 PF00986 DNA gyrase B subunit, carboxyl terminus VCSRO5_0012 PF18053 DNA gyrase B subunit insert domain VCSRO5_0015 PF00011 Hsp20/alpha crystallin family VCSRO5_0016 PF00155 Aminotransferase class I and II VCSRO5_0017 PF05746 DALR anticodon binding domain VCSRO5_0017 PF02092 Glycyl-tRNA synthetase beta subunit VCSRO5_0018 PF02091 Glycyl-tRNA synthetase alpha subunit VCSRO5_0019 PF01169 Uncharacterized protein family UPF0016 VCSRO5_0021 PF01206 Sulfurtransferase TusA VCSRO5_0023 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO5_0023 PF00107 Zinc-binding dehydrogenase VCSRO5_0024 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO5_0024 PF00585 C-terminal regulatory domain of Threonine dehydratase VCSRO5_0025 PF00920 Dehydratase family VCSRO5_0026 PF01063 Amino-transferase class IV VCSRO5_0028 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO5_0028 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO5_0028 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO5_0029 PF01078 Magnesium chelatase, subunit ChlI VCSRO5_0029 PF13335 Magnesium chelatase, subunit ChlI C-terminal VCSRO5_0030 PF01553 Acyltransferase VCSRO5_0031 PF01323 DSBA-like thioredoxin domain VCSRO5_0032 PF01636 Phosphotransferase enzyme family VCSRO5_0033 PF12801 4Fe-4S binding domain VCSRO5_0033 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VCSRO5_0033 PF13746 4Fe-4S dicluster domain VCSRO5_0034 PF06288 Protein of unknown function (DUF1040) VCSRO5_0035 PF07070 SpoOM protein VCSRO5_0036 PF03006 Haemolysin-III related VCSRO5_0038 PF02386 Cation transport protein VCSRO5_0039 PF02080 TrkA-C domain VCSRO5_0039 PF02254 TrkA-N domain VCSRO5_0040 PF01189 16S rRNA methyltransferase RsmB/F VCSRO5_0040 PF01029 NusB family VCSRO5_0041 PF00551 Formyl transferase VCSRO5_0041 PF02911 Formyl transferase, C-terminal domain VCSRO5_0042 PF01327 Polypeptide deformylase VCSRO5_0043 PF01476 LysM domain VCSRO5_0044 PF02481 DNA recombination-mediator protein A VCSRO5_0044 PF17782 DprA winged helix domain VCSRO5_0045 PF04361 Protein of unknown function (DUF494) VCSRO5_0046 PF01396 Topoisomerase DNA binding C4 zinc finger VCSRO5_0047 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VCSRO5_0047 PF02222 ATP-grasp domain VCSRO5_0048 PF00731 AIR carboxylase VCSRO5_0049 PF01300 Telomere recombination VCSRO5_0050 PF01218 Coproporphyrinogen III oxidase VCSRO5_0051 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VCSRO5_0051 PF01488 Shikimate / quinate 5-dehydrogenase VCSRO5_0051 PF08501 Shikimate dehydrogenase substrate binding domain VCSRO5_0053 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_0060 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VCSRO5_0061 PF13667 ThiC-associated domain VCSRO5_0061 PF01964 Radical SAM ThiC family VCSRO5_0062 PF02581 Thiamine monophosphate synthase VCSRO5_0063 PF00899 ThiF family VCSRO5_0064 PF02597 ThiS family VCSRO5_0065 PF05690 Thiazole biosynthesis protein ThiG VCSRO5_0066 PF06968 Biotin and Thiamin Synthesis associated domain VCSRO5_0066 PF04055 Radical SAM superfamily VCSRO5_0067 PF01321 Creatinase/Prolidase N-terminal domain VCSRO5_0067 PF00557 Metallopeptidase family M24 VCSRO5_0068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_0068 PF03466 LysR substrate binding domain VCSRO5_0069 PF07690 Major Facilitator Superfamily VCSRO5_0071 PF01037 Lrp/AsnC ligand binding domain VCSRO5_0072 PF00563 EAL domain VCSRO5_0072 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0072 PF08448 PAS fold VCSRO5_0073 PF04445 Putative SAM-dependent methyltransferase VCSRO5_0075 PF00892 EamA-like transporter family VCSRO5_0076 PF00582 Universal stress protein family VCSRO5_0077 PF00210 Ferritin-like domain VCSRO5_0078 PF10625 Universal stress protein B (UspB) VCSRO5_0081 PF02646 RmuC family VCSRO5_0082 PF01209 ubiE/COQ5 methyltransferase family VCSRO5_0083 PF02036 SCP-2 sterol transfer family VCSRO5_0084 PF03109 ABC1 family VCSRO5_0085 PF02416 mttA/Hcf106 family VCSRO5_0086 PF02416 mttA/Hcf106 family VCSRO5_0087 PF00902 Sec-independent protein translocase protein (TatC) VCSRO5_0088 PF03150 Di-haem cytochrome c peroxidase VCSRO5_0088 PF00034 Cytochrome c VCSRO5_0089 PF01554 MatE VCSRO5_0091 PF01726 LexA DNA binding domain VCSRO5_0091 PF00717 Peptidase S24-like VCSRO5_0092 PF01553 Acyltransferase VCSRO5_0093 PF13006 Insertion element 4 transposase N-terminal VCSRO5_0093 PF01609 Transposase DDE domain VCSRO5_0094 PF01040 UbiA prenyltransferase family VCSRO5_0095 PF04345 Chorismate lyase VCSRO5_0096 PF03748 Flagellar basal body-associated protein FliL VCSRO5_0097 PF02203 Tar ligand binding domain homologue VCSRO5_0097 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_0097 PF00672 HAMP domain VCSRO5_0098 PF01694 Rhomboid family VCSRO5_0098 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VCSRO5_0099 PF00581 Rhodanese-like domain VCSRO5_0100 PF01026 TatD related DNase VCSRO5_0101 PF00490 Delta-aminolevulinic acid dehydratase VCSRO5_0103 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VCSRO5_0103 PF00476 DNA polymerase family A VCSRO5_0103 PF01612 3'-5' exonuclease VCSRO5_0103 PF01367 5'-3' exonuclease, C-terminal SAM fold VCSRO5_0104 PF01926 50S ribosome-binding GTPase VCSRO5_0105 PF00034 Cytochrome c VCSRO5_0107 PF04220 Der GTPase activator (YihI) VCSRO5_0108 PF10675 Protein of unknown function (DUF2489) VCSRO5_0109 PF04055 Radical SAM superfamily VCSRO5_0109 PF06969 HemN C-terminal domain VCSRO5_0110 PF07219 HemY protein N-terminus VCSRO5_0111 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VCSRO5_0112 PF02602 Uroporphyrinogen-III synthase HemD VCSRO5_0113 PF03900 Porphobilinogen deaminase, C-terminal domain VCSRO5_0113 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VCSRO5_0114 PF01295 Adenylate cyclase, class-I VCSRO5_0114 PF12633 Adenylate cyclase NT domain VCSRO5_0115 PF01491 Frataxin-like domain VCSRO5_0116 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VCSRO5_0116 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VCSRO5_0117 PF01678 Diaminopimelate epimerase VCSRO5_0118 PF04340 Protein of unknown function, DUF484 VCSRO5_0119 PF02899 Phage integrase, N-terminal SAM-like domain VCSRO5_0119 PF00589 Phage integrase family VCSRO5_0120 PF13419 Haloacid dehalogenase-like hydrolase VCSRO5_0121 PF00563 EAL domain VCSRO5_0121 PF10442 FIST C domain VCSRO5_0121 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0121 PF08495 FIST N domain VCSRO5_0122 PF03942 DTW domain VCSRO5_0125 PF12146 Serine aminopeptidase, S33 VCSRO5_0126 PF01810 LysE type translocator VCSRO5_0127 PF00563 EAL domain VCSRO5_0127 PF08668 HDOD domain VCSRO5_0128 PF00210 Ferritin-like domain VCSRO5_0134 PF02881 SRP54-type protein, helical bundle domain VCSRO5_0134 PF00448 SRP54-type protein, GTPase domain VCSRO5_0135 PF00005 ABC transporter VCSRO5_0136 PF18075 FtsX extracellular domain VCSRO5_0137 PF00140 Sigma-70 factor, region 1.2 VCSRO5_0137 PF04542 Sigma-70 region 2 VCSRO5_0137 PF04545 Sigma-70, region 4 VCSRO5_0138 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_0138 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO5_0139 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_0141 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO5_0142 PF07715 TonB-dependent Receptor Plug Domain VCSRO5_0142 PF00593 TonB dependent receptor VCSRO5_0143 PF05922 Peptidase inhibitor I9 VCSRO5_0143 PF00082 Subtilase family VCSRO5_0143 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO5_0144 PF01177 Asp/Glu/Hydantoin racemase VCSRO5_0157 PF00962 Adenosine/AMP deaminase VCSRO5_0158 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_0158 PF13188 PAS domain VCSRO5_0158 PF00563 EAL domain VCSRO5_0158 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0159 PF00158 Sigma-54 interaction domain VCSRO5_0159 PF02954 Bacterial regulatory protein, Fis family VCSRO5_0159 PF00072 Response regulator receiver domain VCSRO5_0160 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_0160 PF00989 PAS fold VCSRO5_0160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0162 PF03951 Glutamine synthetase, beta-Grasp domain VCSRO5_0162 PF00120 Glutamine synthetase, catalytic domain VCSRO5_0164 PF00009 Elongation factor Tu GTP binding domain VCSRO5_0164 PF00679 Elongation factor G C-terminus VCSRO5_0164 PF03144 Elongation factor Tu domain 2 VCSRO5_0166 PF03631 Virulence factor BrkB VCSRO5_0167 PF02580 D-Tyr-tRNA(Tyr) deacylase VCSRO5_0168 PF00583 Acetyltransferase (GNAT) family VCSRO5_0168 PF09500 Putative thioesterase (yiiD_Cterm) VCSRO5_0170 PF01293 Phosphoenolpyruvate carboxykinase VCSRO5_0171 PF01430 Hsp33 protein VCSRO5_0172 PF01479 S4 domain VCSRO5_0173 PF11356 Type II secretion system protein C VCSRO5_0174 PF03958 Bacterial type II/III secretion system short domain VCSRO5_0174 PF00263 Bacterial type II and III secretion system protein VCSRO5_0175 PF00437 Type II/IV secretion system protein VCSRO5_0176 PF00482 Type II secretion system (T2SS), protein F VCSRO5_0177 PF07963 Prokaryotic N-terminal methylation motif VCSRO5_0177 PF08334 Type II secretion system (T2SS), protein G VCSRO5_0178 PF12019 Type II transport protein GspH VCSRO5_0179 PF07963 Prokaryotic N-terminal methylation motif VCSRO5_0179 PF02501 Type II secretion system (T2SS), protein I VCSRO5_0180 PF07963 Prokaryotic N-terminal methylation motif VCSRO5_0180 PF11612 Type II secretion system (T2SS), protein J VCSRO5_0181 PF03934 Type II secretion system (T2SS), protein K VCSRO5_0182 PF05134 Type II secretion system (T2SS), protein L VCSRO5_0182 PF12693 GspL periplasmic domain VCSRO5_0183 PF04612 Type II secretion system (T2SS), protein M VCSRO5_0184 PF01203 Type II secretion system (T2SS), protein N VCSRO5_0185 PF00459 Inositol monophosphatase family VCSRO5_0186 PF00293 NUDIX domain VCSRO5_0187 PF01521 Iron-sulphur cluster biosynthesis VCSRO5_0187 PF01106 NifU-like domain VCSRO5_0188 PF00156 Phosphoribosyl transferase domain VCSRO5_0189 PF00561 alpha/beta hydrolase fold VCSRO5_0191 PF16921 Tex protein YqgF-like domain VCSRO5_0191 PF00575 S1 RNA binding domain VCSRO5_0191 PF17674 HHH domain VCSRO5_0191 PF09371 Tex-like protein N-terminal domain VCSRO5_0192 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO5_0192 PF03449 Transcription elongation factor, N-terminal VCSRO5_0193 PF17152 Periplasmic sensor domain VCSRO5_0193 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0194 PF00072 Response regulator receiver domain VCSRO5_0194 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_0195 PF00672 HAMP domain VCSRO5_0195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0195 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_0196 PF00860 Permease family VCSRO5_0197 PF00271 Helicase conserved C-terminal domain VCSRO5_0197 PF00270 DEAD/DEAH box helicase VCSRO5_0197 PF17191 RecG wedge domain VCSRO5_0198 PF02824 TGS domain VCSRO5_0198 PF04607 Region found in RelA / SpoT proteins VCSRO5_0198 PF13291 ACT domain VCSRO5_0199 PF01192 RNA polymerase Rpb6 VCSRO5_0200 PF00625 Guanylate kinase VCSRO5_0201 PF02592 Putative vitamin uptake transporter VCSRO5_0202 PF00474 Sodium:solute symporter family VCSRO5_0204 PF03471 Transporter associated domain VCSRO5_0204 PF00999 Sodium/hydrogen exchanger family VCSRO5_0204 PF02080 TrkA-C domain VCSRO5_0205 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_0205 PF00072 Response regulator receiver domain VCSRO5_0206 PF11412 Disulphide bond corrector protein DsbC VCSRO5_0206 PF02683 Cytochrome C biogenesis protein transmembrane region VCSRO5_0207 PF11852 Domain of unknown function (DUF3372) VCSRO5_0207 PF03714 Bacterial pullanase-associated domain VCSRO5_0207 PF18494 Pullulanase Ins domain VCSRO5_0207 PF17967 Pullulanase N2 domain VCSRO5_0207 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO5_0208 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCSRO5_0209 PF13006 Insertion element 4 transposase N-terminal VCSRO5_0209 PF01609 Transposase DDE domain VCSRO5_0210 PF10415 Fumarase C C-terminus VCSRO5_0210 PF00206 Lyase VCSRO5_0211 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0211 PF17158 Membrane-associated sensor, integral membrane domain VCSRO5_0212 PF04186 FxsA cytoplasmic membrane protein VCSRO5_0213 PF00588 SpoU rRNA Methylase family VCSRO5_0214 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VCSRO5_0214 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VCSRO5_0215 PF16527 Two-component sensor protein CpxA, periplasmic domain VCSRO5_0215 PF00672 HAMP domain VCSRO5_0215 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_0215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0216 PF00072 Response regulator receiver domain VCSRO5_0216 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_0218 PF01545 Cation efflux family VCSRO5_0218 PF16916 Dimerisation domain of Zinc Transporter VCSRO5_0219 PF00365 Phosphofructokinase VCSRO5_0220 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VCSRO5_0221 PF06005 Cell division protein ZapB VCSRO5_0222 PF02219 Methylenetetrahydrofolate reductase VCSRO5_0223 PF00696 Amino acid kinase family VCSRO5_0223 PF00742 Homoserine dehydrogenase VCSRO5_0223 PF03447 Homoserine dehydrogenase, NAD binding domain VCSRO5_0224 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO5_0225 PF01340 Met Apo-repressor, MetJ VCSRO5_0226 PF00390 Malic enzyme, N-terminal domain VCSRO5_0226 PF03949 Malic enzyme, NAD binding domain VCSRO5_0227 PF00390 Malic enzyme, N-terminal domain VCSRO5_0227 PF03949 Malic enzyme, NAD binding domain VCSRO5_0228 PF01197 Ribosomal protein L31 VCSRO5_0229 PF18074 Primosomal protein N C-terminal domain VCSRO5_0229 PF17764 3′ DNA-binding domain (3′BD) VCSRO5_0229 PF00270 DEAD/DEAH box helicase VCSRO5_0229 PF00271 Helicase conserved C-terminal domain VCSRO5_0229 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VCSRO5_0230 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_0231 PF05036 Sporulation related domain VCSRO5_0232 PF00227 Proteasome subunit VCSRO5_0233 PF07724 AAA domain (Cdc48 subfamily) VCSRO5_0233 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO5_0233 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO5_0234 PF01040 UbiA prenyltransferase family VCSRO5_0235 PF03737 Aldolase/RraA VCSRO5_0236 PF01554 MatE VCSRO5_0237 PF00121 Triosephosphate isomerase VCSRO5_0241 PF08220 DeoR-like helix-turn-helix domain VCSRO5_0241 PF00455 DeoR C terminal sensor domain VCSRO5_0242 PF00166 Chaperonin 10 Kd subunit VCSRO5_0243 PF00118 TCP-1/cpn60 chaperonin family VCSRO5_0245 PF04055 Radical SAM superfamily VCSRO5_0246 PF01132 Elongation factor P (EF-P) OB domain VCSRO5_0246 PF08207 Elongation factor P (EF-P) KOW-like domain VCSRO5_0246 PF09285 Elongation factor P, C-terminal VCSRO5_0247 PF02313 Fumarate reductase subunit D VCSRO5_0248 PF02300 Fumarate reductase subunit C VCSRO5_0249 PF13183 4Fe-4S dicluster domain VCSRO5_0249 PF13085 2Fe-2S iron-sulfur cluster binding domain VCSRO5_0250 PF02910 Fumarate reductase flavoprotein C-term VCSRO5_0250 PF00890 FAD binding domain VCSRO5_0251 PF00152 tRNA synthetases class II (D, K and N) VCSRO5_0252 PF00581 Rhodanese-like domain VCSRO5_0253 PF02556 Preprotein translocase subunit SecB VCSRO5_0254 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VCSRO5_0254 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VCSRO5_0255 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_0255 PF06426 Serine acetyltransferase, N-terminal VCSRO5_0257 PF00311 Phosphoenolpyruvate carboxylase VCSRO5_0258 PF07687 Peptidase dimerisation domain VCSRO5_0258 PF01546 Peptidase family M20/M25/M40 VCSRO5_0259 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO5_0259 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO5_0260 PF00696 Amino acid kinase family VCSRO5_0261 PF00764 Arginosuccinate synthase VCSRO5_0262 PF14698 Argininosuccinate lyase C-terminal VCSRO5_0262 PF00206 Lyase VCSRO5_0264 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_0264 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO5_0265 PF00462 Glutaredoxin VCSRO5_0265 PF08534 Redoxin VCSRO5_0266 PF03466 LysR substrate binding domain VCSRO5_0266 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_0267 PF00905 Penicillin binding protein transpeptidase domain VCSRO5_0267 PF00912 Transglycosylase VCSRO5_0267 PF17092 Penicillin-binding protein OB-like domain VCSRO5_0271 PF04351 Pilus assembly protein, PilP VCSRO5_0272 PF11741 AMIN domain VCSRO5_0272 PF00263 Bacterial type II and III secretion system protein VCSRO5_0272 PF03958 Bacterial type II/III secretion system short domain VCSRO5_0272 PF07660 Secretin and TonB N terminus short domain VCSRO5_0273 PF01202 Shikimate kinase VCSRO5_0274 PF01761 3-dehydroquinate synthase VCSRO5_0276 PF02086 D12 class N6 adenine-specific DNA methyltransferase VCSRO5_0277 PF00834 Ribulose-phosphate 3 epimerase family VCSRO5_0278 PF13419 Haloacid dehalogenase-like hydrolase VCSRO5_0279 PF00579 tRNA synthetases class I (W and Y) VCSRO5_0282 PF18693 TRAM domain VCSRO5_0282 PF00919 Uncharacterized protein family UPF0004 VCSRO5_0282 PF04055 Radical SAM superfamily VCSRO5_0283 PF00117 Glutamine amidotransferase class-I VCSRO5_0284 PF00202 Aminotransferase class-III VCSRO5_0285 PF04958 Arginine N-succinyltransferase beta subunit VCSRO5_0286 PF00171 Aldehyde dehydrogenase family VCSRO5_0288 PF00027 Cyclic nucleotide-binding domain VCSRO5_0288 PF13545 Crp-like helix-turn-helix domain VCSRO5_0289 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO5_0290 PF06794 Uncharacterised protein family (UPF0270) VCSRO5_0291 PF00561 alpha/beta hydrolase fold VCSRO5_0293 PF00005 ABC transporter VCSRO5_0293 PF12848 ABC transporter VCSRO5_0294 PF02525 Flavodoxin-like fold VCSRO5_0295 PF02254 TrkA-N domain VCSRO5_0295 PF00999 Sodium/hydrogen exchanger family VCSRO5_0297 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO5_0298 PF01112 Asparaginase VCSRO5_0299 PF00709 Adenylosuccinate synthetase VCSRO5_0300 PF08238 Sel1 repeat VCSRO5_0301 PF11893 Domain of unknown function (DUF3413) VCSRO5_0301 PF00884 Sulfatase VCSRO5_0302 PF17876 Cold shock domain VCSRO5_0302 PF08461 Ribonuclease R winged-helix domain VCSRO5_0302 PF08206 Ribonuclease B OB domain VCSRO5_0302 PF00773 RNB domain VCSRO5_0302 PF00575 S1 RNA binding domain VCSRO5_0303 PF08032 RNA 2'-O ribose methyltransferase substrate binding VCSRO5_0303 PF00588 SpoU rRNA Methylase family VCSRO5_0304 PF00338 Ribosomal protein S10p/S20e VCSRO5_0305 PF00297 Ribosomal protein L3 VCSRO5_0306 PF00573 Ribosomal protein L4/L1 family VCSRO5_0307 PF00276 Ribosomal protein L23 VCSRO5_0308 PF00181 Ribosomal Proteins L2, RNA binding domain VCSRO5_0308 PF03947 Ribosomal Proteins L2, C-terminal domain VCSRO5_0309 PF00203 Ribosomal protein S19 VCSRO5_0310 PF00237 Ribosomal protein L22p/L17e VCSRO5_0311 PF07650 KH domain VCSRO5_0311 PF00189 Ribosomal protein S3, C-terminal domain VCSRO5_0312 PF00252 Ribosomal protein L16p/L10e VCSRO5_0313 PF00831 Ribosomal L29 protein VCSRO5_0314 PF00366 Ribosomal protein S17 VCSRO5_0315 PF00238 Ribosomal protein L14p/L23e VCSRO5_0316 PF00467 KOW motif VCSRO5_0316 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VCSRO5_0317 PF00281 Ribosomal protein L5 VCSRO5_0317 PF00673 ribosomal L5P family C-terminus VCSRO5_0318 PF00253 Ribosomal protein S14p/S29e VCSRO5_0319 PF00410 Ribosomal protein S8 VCSRO5_0320 PF00347 Ribosomal protein L6 VCSRO5_0321 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VCSRO5_0322 PF00333 Ribosomal protein S5, N-terminal domain VCSRO5_0322 PF03719 Ribosomal protein S5, C-terminal domain VCSRO5_0323 PF00327 Ribosomal protein L30p/L7e VCSRO5_0324 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VCSRO5_0325 PF00344 SecY translocase VCSRO5_0326 PF00444 Ribosomal protein L36 VCSRO5_0327 PF00416 Ribosomal protein S13/S18 VCSRO5_0328 PF00411 Ribosomal protein S11 VCSRO5_0329 PF00163 Ribosomal protein S4/S9 N-terminal domain VCSRO5_0329 PF01479 S4 domain VCSRO5_0330 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VCSRO5_0330 PF01000 RNA polymerase Rpb3/RpoA insert domain VCSRO5_0330 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VCSRO5_0331 PF01196 Ribosomal protein L17 VCSRO5_0333 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO5_0333 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO5_0334 PF04225 Opacity-associated protein A LysM-like domain VCSRO5_0334 PF08525 Opacity-associated protein A N-terminal motif VCSRO5_0335 PF00892 EamA-like transporter family VCSRO5_0336 PF13673 Acetyltransferase (GNAT) domain VCSRO5_0337 PF00271 Helicase conserved C-terminal domain VCSRO5_0337 PF00270 DEAD/DEAH box helicase VCSRO5_0337 PF03880 DbpA RNA binding domain VCSRO5_0339 PF00149 Calcineurin-like phosphoesterase VCSRO5_0339 PF02872 5'-nucleotidase, C-terminal domain VCSRO5_0340 PF14824 Sirohaem biosynthesis protein central VCSRO5_0340 PF10414 Sirohaem synthase dimerisation region VCSRO5_0340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO5_0341 PF01507 Phosphoadenosine phosphosulfate reductase family VCSRO5_0342 PF00009 Elongation factor Tu GTP binding domain VCSRO5_0347 PF00005 ABC transporter VCSRO5_0347 PF02687 FtsX-like permease family VCSRO5_0347 PF12704 MacB-like periplasmic core domain VCSRO5_0349 PF10795 Protein of unknown function (DUF2607) VCSRO5_0350 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VCSRO5_0351 PF01625 Peptide methionine sulfoxide reductase VCSRO5_0352 PF17243 POTRA domain TamA domain 1 VCSRO5_0352 PF07244 Surface antigen variable number repeat VCSRO5_0352 PF01103 Surface antigen VCSRO5_0353 PF04357 TamB, inner membrane protein subunit of TAM complex VCSRO5_0354 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VCSRO5_0355 PF00719 Inorganic pyrophosphatase VCSRO5_0356 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VCSRO5_0357 PF01225 Mur ligase family, catalytic domain VCSRO5_0357 PF02875 Mur ligase family, glutamate ligase domain VCSRO5_0357 PF08245 Mur ligase middle domain VCSRO5_0358 PF02441 Flavoprotein VCSRO5_0360 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_0361 PF00005 ABC transporter VCSRO5_0362 PF04751 Protein of unknown function (DUF615) VCSRO5_0363 PF01523 Putative modulator of DNA gyrase VCSRO5_0364 PF00571 CBS domain VCSRO5_0364 PF01769 Divalent cation transporter VCSRO5_0364 PF03448 MgtE intracellular N domain VCSRO5_0365 PF00381 PTS HPr component phosphorylation site VCSRO5_0366 PF03668 P-loop ATPase protein family VCSRO5_0367 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO5_0368 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VCSRO5_0369 PF00309 Sigma-54 factor, Activator interacting domain (AID) VCSRO5_0369 PF04963 Sigma-54 factor, core binding domain VCSRO5_0369 PF04552 Sigma-54, DNA binding domain VCSRO5_0370 PF00005 ABC transporter VCSRO5_0370 PF12399 Branched-chain amino acid ATP-binding cassette transporter VCSRO5_0371 PF03968 OstA-like protein VCSRO5_0374 PF01380 SIS domain VCSRO5_0374 PF00571 CBS domain VCSRO5_0375 PF01699 Sodium/calcium exchanger protein VCSRO5_0376 PF00005 ABC transporter VCSRO5_0377 PF02405 Permease MlaE VCSRO5_0378 PF02470 MlaD protein VCSRO5_0379 PF05494 MlaC protein VCSRO5_0381 PF01722 BolA-like protein VCSRO5_0382 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VCSRO5_0383 PF01553 Acyltransferase VCSRO5_0384 PF01042 Endoribonuclease L-PSP VCSRO5_0385 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VCSRO5_0385 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VCSRO5_0386 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCSRO5_0386 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCSRO5_0387 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCSRO5_0387 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCSRO5_0388 PF13638 PIN domain VCSRO5_0388 PF02562 PhoH-like protein VCSRO5_0389 PF18339 RapA N-terminal Tudor like domain 1 VCSRO5_0389 PF00176 SNF2 family N-terminal domain VCSRO5_0389 PF12137 RNA polymerase recycling family C-terminal VCSRO5_0389 PF00271 Helicase conserved C-terminal domain VCSRO5_0389 PF18337 RapA N-terminal Tudor like domain VCSRO5_0390 PF00849 RNA pseudouridylate synthase VCSRO5_0391 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO5_0391 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO5_0392 PF08264 Anticodon-binding domain of tRNA VCSRO5_0392 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO5_0392 PF10458 Valyl tRNA synthetase tRNA binding arm VCSRO5_0393 PF04364 DNA polymerase III chi subunit, HolC VCSRO5_0394 PF00883 Cytosol aminopeptidase family, catalytic domain VCSRO5_0394 PF02789 Cytosol aminopeptidase family, N-terminal domain VCSRO5_0395 PF03739 Lipopolysaccharide export system permease LptF/LptG VCSRO5_0396 PF03739 Lipopolysaccharide export system permease LptF/LptG VCSRO5_0399 PF00072 Response regulator receiver domain VCSRO5_0408 PF00694 Aconitase C-terminal domain VCSRO5_0409 PF00330 Aconitase family (aconitate hydratase) VCSRO5_0410 PF00180 Isocitrate/isopropylmalate dehydrogenase VCSRO5_0411 PF00682 HMGL-like VCSRO5_0411 PF08502 LeuA allosteric (dimerisation) domain VCSRO5_0413 PF01569 PAP2 superfamily VCSRO5_0415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_0415 PF03466 LysR substrate binding domain VCSRO5_0416 PF00501 AMP-binding enzyme VCSRO5_0417 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO5_0417 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO5_0417 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO5_0418 PF10369 Small subunit of acetolactate synthase VCSRO5_0419 PF01609 Transposase DDE domain VCSRO5_0419 PF13006 Insertion element 4 transposase N-terminal VCSRO5_0420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO5_0420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO5_0420 PF01842 ACT domain VCSRO5_0421 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VCSRO5_0422 PF01812 5-formyltetrahydrofolate cyclo-ligase family VCSRO5_0423 PF05164 Cell division protein ZapA VCSRO5_0424 PF03695 Uncharacterised protein family (UPF0149) VCSRO5_0425 PF01494 FAD binding domain VCSRO5_0426 PF01494 FAD binding domain VCSRO5_0429 PF03937 Flavinator of succinate dehydrogenase VCSRO5_0431 PF00890 FAD binding domain VCSRO5_0431 PF02910 Fumarate reductase flavoprotein C-term VCSRO5_0432 PF04542 Sigma-70 region 2 VCSRO5_0432 PF08281 Sigma-70, region 4 VCSRO5_0433 PF03872 Anti sigma-E protein RseA, N-terminal domain VCSRO5_0433 PF03873 Anti sigma-E protein RseA, C-terminal domain VCSRO5_0434 PF17188 MucB/RseB C-terminal domain VCSRO5_0434 PF03888 MucB/RseB N-terminal domain VCSRO5_0436 PF00679 Elongation factor G C-terminus VCSRO5_0436 PF00009 Elongation factor Tu GTP binding domain VCSRO5_0436 PF03144 Elongation factor Tu domain 2 VCSRO5_0436 PF06421 GTP-binding protein LepA C-terminus VCSRO5_0437 PF10502 Signal peptidase, peptidase S26 VCSRO5_0438 PF00035 Double-stranded RNA binding motif VCSRO5_0438 PF14622 Ribonuclease-III-like VCSRO5_0439 PF01926 50S ribosome-binding GTPase VCSRO5_0439 PF07650 KH domain VCSRO5_0440 PF02565 Recombination protein O C terminal VCSRO5_0440 PF11967 Recombination protein O N terminal VCSRO5_0441 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VCSRO5_0442 PF01648 4'-phosphopantetheinyl transferase superfamily VCSRO5_0445 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0446 PF00672 HAMP domain VCSRO5_0446 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0446 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_0446 PF01627 Hpt domain VCSRO5_0446 PF00072 Response regulator receiver domain VCSRO5_0446 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VCSRO5_0447 PF01938 TRAM domain VCSRO5_0447 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO5_0448 PF13291 ACT domain VCSRO5_0448 PF04607 Region found in RelA / SpoT proteins VCSRO5_0448 PF02824 TGS domain VCSRO5_0449 PF03819 MazG nucleotide pyrophosphohydrolase domain VCSRO5_0450 PF06418 CTP synthase N-terminus VCSRO5_0450 PF00117 Glutamine amidotransferase class-I VCSRO5_0451 PF03952 Enolase, N-terminal domain VCSRO5_0451 PF00113 Enolase, C-terminal TIM barrel domain VCSRO5_0452 PF12627 Probable RNA and SrmB- binding site of polymerase A VCSRO5_0452 PF01743 Poly A polymerase head domain VCSRO5_0452 PF01966 HD domain VCSRO5_0453 PF01471 Putative peptidoglycan binding domain VCSRO5_0453 PF13401 AAA domain VCSRO5_0455 PF08239 Bacterial SH3 domain VCSRO5_0456 PF01384 Phosphate transporter family VCSRO5_0457 PF01865 Protein of unknown function DUF47 VCSRO5_0458 PF01928 CYTH domain VCSRO5_0460 PF00672 HAMP domain VCSRO5_0460 PF02743 Cache domain VCSRO5_0460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_0461 PF08335 GlnD PII-uridylyltransferase VCSRO5_0461 PF03710 Glutamate-ammonia ligase adenylyltransferase VCSRO5_0462 PF01467 Cytidylyltransferase-like VCSRO5_0462 PF00294 pfkB family carbohydrate kinase VCSRO5_0463 PF02321 Outer membrane efflux protein VCSRO5_0464 PF00293 NUDIX domain VCSRO5_0465 PF06853 Protein of unknown function (DUF1249) VCSRO5_0466 PF00149 Calcineurin-like phosphoesterase VCSRO5_0467 PF05728 Uncharacterised protein family (UPF0227) VCSRO5_0468 PF00204 DNA gyrase B VCSRO5_0468 PF00986 DNA gyrase B subunit, carboxyl terminus VCSRO5_0468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0468 PF01751 Toprim domain VCSRO5_0469 PF03989 DNA gyrase C-terminal domain, beta-propeller VCSRO5_0469 PF00521 DNA gyrase/topoisomerase IV, subunit A VCSRO5_0470 PF03884 DNA gyrase inhibitor YacG VCSRO5_0471 PF07072 Cell division protein VCSRO5_0472 PF01121 Dephospho-CoA kinase VCSRO5_0473 PF06750 Bacterial Peptidase A24 N-terminal domain VCSRO5_0473 PF01478 Type IV leader peptidase family VCSRO5_0474 PF00482 Type II secretion system (T2SS), protein F VCSRO5_0475 PF00437 Type II/IV secretion system protein VCSRO5_0475 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VCSRO5_0476 PF00114 Pilin (bacterial filament) VCSRO5_0476 PF07963 Prokaryotic N-terminal methylation motif VCSRO5_0477 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VCSRO5_0477 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VCSRO5_0478 PF01510 N-acetylmuramoyl-L-alanine amidase VCSRO5_0479 PF00258 Flavodoxin VCSRO5_0480 PF02899 Phage integrase, N-terminal SAM-like domain VCSRO5_0480 PF00589 Phage integrase family VCSRO5_0481 PF10411 Disulfide bond isomerase protein N-terminus VCSRO5_0481 PF13098 Thioredoxin-like domain VCSRO5_0482 PF01368 DHH family VCSRO5_0482 PF17768 RecJ OB domain VCSRO5_0482 PF02272 DHHA1 domain VCSRO5_0483 PF00392 Bacterial regulatory proteins, gntR family VCSRO5_0483 PF07729 FCD domain VCSRO5_0484 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO5_0484 PF17831 Pyruvate dehydrogenase E1 component middle domain VCSRO5_0485 PF00364 Biotin-requiring enzyme VCSRO5_0485 PF02817 e3 binding domain VCSRO5_0485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VCSRO5_0486 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO5_0486 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_0487 PF01795 MraW methylase family VCSRO5_0488 PF04999 Cell division protein FtsL VCSRO5_0489 PF03717 Penicillin-binding Protein dimerisation domain VCSRO5_0489 PF00905 Penicillin binding protein transpeptidase domain VCSRO5_0490 PF08245 Mur ligase middle domain VCSRO5_0490 PF01225 Mur ligase family, catalytic domain VCSRO5_0490 PF02875 Mur ligase family, glutamate ligase domain VCSRO5_0491 PF01225 Mur ligase family, catalytic domain VCSRO5_0491 PF02875 Mur ligase family, glutamate ligase domain VCSRO5_0491 PF08245 Mur ligase middle domain VCSRO5_0492 PF00953 Glycosyl transferase family 4 VCSRO5_0492 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VCSRO5_0493 PF08245 Mur ligase middle domain VCSRO5_0493 PF02875 Mur ligase family, glutamate ligase domain VCSRO5_0494 PF01098 Cell cycle protein VCSRO5_0495 PF03033 Glycosyltransferase family 28 N-terminal domain VCSRO5_0495 PF04101 Glycosyltransferase family 28 C-terminal domain VCSRO5_0496 PF02875 Mur ligase family, glutamate ligase domain VCSRO5_0496 PF08245 Mur ligase middle domain VCSRO5_0496 PF01225 Mur ligase family, catalytic domain VCSRO5_0497 PF03799 Cell division protein FtsQ VCSRO5_0497 PF08478 POTRA domain, FtsQ-type VCSRO5_0498 PF02491 SHS2 domain inserted in FTSA VCSRO5_0499 PF12327 FtsZ family, C-terminal domain VCSRO5_0499 PF00091 Tubulin/FtsZ family, GTPase domain VCSRO5_0500 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VCSRO5_0502 PF07517 SecA DEAD-like domain VCSRO5_0502 PF02810 SEC-C motif VCSRO5_0502 PF07516 SecA Wing and Scaffold domain VCSRO5_0502 PF01043 SecA preprotein cross-linking domain VCSRO5_0503 PF00293 NUDIX domain VCSRO5_0504 PF05173 Dihydrodipicolinate reductase, C-terminus VCSRO5_0504 PF01113 Dihydrodipicolinate reductase, N-terminus VCSRO5_0505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VCSRO5_0505 PF00117 Glutamine amidotransferase class-I VCSRO5_0506 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VCSRO5_0506 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VCSRO5_0506 PF02142 MGS-like domain VCSRO5_0508 PF03783 Curli production assembly/transport component CsgG VCSRO5_0512 PF01925 Sulfite exporter TauE/SafE VCSRO5_0513 PF03466 LysR substrate binding domain VCSRO5_0513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_0514 PF03458 UPF0126 domain VCSRO5_0515 PF01497 Periplasmic binding protein VCSRO5_0517 PF01048 Phosphorylase superfamily VCSRO5_0519 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VCSRO5_0519 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_0520 PF04898 Glutamate synthase central domain VCSRO5_0520 PF00310 Glutamine amidotransferases class-II VCSRO5_0520 PF01645 Conserved region in glutamate synthase VCSRO5_0520 PF01493 GXGXG motif VCSRO5_0521 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VCSRO5_0521 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_0522 PF00310 Glutamine amidotransferases class-II VCSRO5_0522 PF04898 Glutamate synthase central domain VCSRO5_0522 PF01493 GXGXG motif VCSRO5_0522 PF01645 Conserved region in glutamate synthase VCSRO5_0523 PF04055 Radical SAM superfamily VCSRO5_0523 PF16199 Radical_SAM C-terminal domain VCSRO5_0524 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0524 PF00563 EAL domain VCSRO5_0524 PF01590 GAF domain VCSRO5_0524 PF00360 Phytochrome region VCSRO5_0525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0525 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_0525 PF18415 Histidine kinase receptor ArcB trans-membrane domain VCSRO5_0525 PF00072 Response regulator receiver domain VCSRO5_0525 PF01627 Hpt domain VCSRO5_0525 PF00989 PAS fold VCSRO5_0526 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_0526 PF00072 Response regulator receiver domain VCSRO5_0527 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_0527 PF00072 Response regulator receiver domain VCSRO5_0529 PF03737 Aldolase/RraA VCSRO5_0531 PF03447 Homoserine dehydrogenase, NAD binding domain VCSRO5_0531 PF00696 Amino acid kinase family VCSRO5_0531 PF01842 ACT domain VCSRO5_0531 PF13840 ACT domain VCSRO5_0531 PF00742 Homoserine dehydrogenase VCSRO5_0532 PF08544 GHMP kinases C terminal VCSRO5_0532 PF00288 GHMP kinases N terminal domain VCSRO5_0533 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO5_0533 PF14821 Threonine synthase N terminus VCSRO5_0534 PF01228 Glycine radical VCSRO5_0535 PF01261 Xylose isomerase-like TIM barrel VCSRO5_0536 PF03167 Uracil DNA glycosylase superfamily VCSRO5_0539 PF01235 Sodium:alanine symporter family VCSRO5_0540 PF03883 Peroxide stress protein YaaA VCSRO5_0542 PF01026 TatD related DNase VCSRO5_0543 PF07670 Nucleoside recognition VCSRO5_0543 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO5_0543 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO5_0544 PF01791 DeoC/LacD family aldolase VCSRO5_0545 PF00591 Glycosyl transferase family, a/b domain VCSRO5_0545 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VCSRO5_0545 PF02885 Glycosyl transferase family, helical bundle domain VCSRO5_0546 PF01676 Metalloenzyme superfamily VCSRO5_0547 PF01048 Phosphorylase superfamily VCSRO5_0549 PF18429 Domain of unknown function (DUF5609) VCSRO5_0550 PF13006 Insertion element 4 transposase N-terminal VCSRO5_0550 PF01609 Transposase DDE domain VCSRO5_0552 PF18073 Rubredoxin metal binding domain VCSRO5_0553 PF00679 Elongation factor G C-terminus VCSRO5_0553 PF14492 Elongation Factor G, domain II VCSRO5_0553 PF03764 Elongation factor G, domain IV VCSRO5_0553 PF00009 Elongation factor Tu GTP binding domain VCSRO5_0553 PF03144 Elongation factor Tu domain 2 VCSRO5_0554 PF00501 AMP-binding enzyme VCSRO5_0555 PF00072 Response regulator receiver domain VCSRO5_0557 PF02837 Glycosyl hydrolases family 2, sugar binding domain VCSRO5_0557 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VCSRO5_0557 PF00703 Glycosyl hydrolases family 2 VCSRO5_0557 PF02929 Beta galactosidase small chain VCSRO5_0557 PF16353 Domain of unknown function(DUF4981) VCSRO5_0558 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_0559 PF01588 Putative tRNA binding domain VCSRO5_0561 PF01544 CorA-like Mg2+ transporter protein VCSRO5_0562 PF08443 RimK-like ATP-grasp domain VCSRO5_0562 PF18030 RimK PreATP-grasp domain VCSRO5_0562 PF02080 TrkA-C domain VCSRO5_0564 PF00583 Acetyltransferase (GNAT) family VCSRO5_0566 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VCSRO5_0566 PF14602 Hexapeptide repeat of succinyl-transferase VCSRO5_0567 PF07130 YebG protein VCSRO5_0570 PF17946 RecC C-terminal domain VCSRO5_0571 PF00580 UvrD/REP helicase N-terminal domain VCSRO5_0571 PF13361 UvrD-like helicase C-terminal domain VCSRO5_0571 PF12705 PD-(D/E)XK nuclease superfamily VCSRO5_0572 PF13538 UvrD-like helicase C-terminal domain VCSRO5_0574 PF00583 Acetyltransferase (GNAT) family VCSRO5_0574 PF00696 Amino acid kinase family VCSRO5_0576 PF06725 3D domain VCSRO5_0576 PF03562 MltA specific insert domain VCSRO5_0577 PF00899 ThiF family VCSRO5_0578 PF02657 Fe-S metabolism associated domain VCSRO5_0579 PF00266 Aminotransferase class-V VCSRO5_0580 PF01965 DJ-1/PfpI family VCSRO5_0581 PF02558 Ketopantoate reductase PanE/ApbA VCSRO5_0581 PF08546 Ketopantoate reductase PanE/ApbA C terminal VCSRO5_0582 PF03502 Nucleoside-specific channel-forming protein, Tsx VCSRO5_0584 PF04542 Sigma-70 region 2 VCSRO5_0584 PF04545 Sigma-70, region 4 VCSRO5_0586 PF07690 Major Facilitator Superfamily VCSRO5_0587 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VCSRO5_0589 PF05175 Methyltransferase small domain VCSRO5_0590 PF01722 BolA-like protein VCSRO5_0591 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VCSRO5_0591 PF11973 NQRA C-terminal domain VCSRO5_0592 PF03116 NQR2, RnfD, RnfE family VCSRO5_0593 PF04205 FMN-binding domain VCSRO5_0594 PF02508 Rnf-Nqr subunit, membrane protein VCSRO5_0595 PF02508 Rnf-Nqr subunit, membrane protein VCSRO5_0596 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO5_0596 PF00970 Oxidoreductase FAD-binding domain VCSRO5_0596 PF00175 Oxidoreductase NAD-binding domain VCSRO5_0597 PF02424 ApbE family VCSRO5_0599 PF11798 IMS family HHH motif VCSRO5_0599 PF00817 impB/mucB/samB family VCSRO5_0601 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0601 PF17158 Membrane-associated sensor, integral membrane domain VCSRO5_0602 PF00209 Sodium:neurotransmitter symporter family VCSRO5_0604 PF18030 RimK PreATP-grasp domain VCSRO5_0604 PF08443 RimK-like ATP-grasp domain VCSRO5_0605 PF18030 RimK PreATP-grasp domain VCSRO5_0605 PF08443 RimK-like ATP-grasp domain VCSRO5_0606 PF07687 Peptidase dimerisation domain VCSRO5_0606 PF01546 Peptidase family M20/M25/M40 VCSRO5_0607 PF00860 Permease family VCSRO5_0608 PF00156 Phosphoribosyl transferase domain VCSRO5_0609 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VCSRO5_0610 PF07417 Sigma factor-binding transcriptional regulator Crl VCSRO5_0611 PF01472 PUA domain VCSRO5_0611 PF00696 Amino acid kinase family VCSRO5_0612 PF00171 Aldehyde dehydrogenase family VCSRO5_0613 PF03477 ATP cone domain VCSRO5_0614 PF01872 RibD C-terminal domain VCSRO5_0614 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO5_0615 PF00677 Lumazine binding domain VCSRO5_0616 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VCSRO5_0616 PF00925 GTP cyclohydrolase II VCSRO5_0617 PF00885 6,7-dimethyl-8-ribityllumazine synthase VCSRO5_0618 PF01029 NusB family VCSRO5_0619 PF00586 AIR synthase related protein, N-terminal domain VCSRO5_0619 PF02769 AIR synthase related protein, C-terminal domain VCSRO5_0620 PF04608 Phosphatidylglycerophosphatase A VCSRO5_0621 PF11944 Protein of unknown function (DUF3461) VCSRO5_0622 PF08335 GlnD PII-uridylyltransferase VCSRO5_0622 PF01966 HD domain VCSRO5_0622 PF01909 Nucleotidyltransferase domain VCSRO5_0623 PF00557 Metallopeptidase family M24 VCSRO5_0624 PF00318 Ribosomal protein S2 VCSRO5_0625 PF00889 Elongation factor TS VCSRO5_0626 PF00696 Amino acid kinase family VCSRO5_0627 PF01765 Ribosome recycling factor VCSRO5_0628 PF01255 Putative undecaprenyl diphosphate synthase VCSRO5_0630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VCSRO5_0630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VCSRO5_0630 PF13288 DXP reductoisomerase C-terminal domain VCSRO5_0631 PF17820 PDZ domain VCSRO5_0631 PF02163 Peptidase family M50 VCSRO5_0632 PF01103 Surface antigen VCSRO5_0632 PF07244 Surface antigen variable number repeat VCSRO5_0633 PF03938 Outer membrane protein (OmpH-like) VCSRO5_0634 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_0634 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VCSRO5_0635 PF07977 FabA-like domain VCSRO5_0636 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VCSRO5_0636 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_0637 PF02684 Lipid-A-disaccharide synthetase VCSRO5_0638 PF01351 Ribonuclease HII VCSRO5_0639 PF02811 PHP domain VCSRO5_0639 PF07733 Bacterial DNA polymerase III alpha NTPase domain VCSRO5_0639 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VCSRO5_0639 PF01336 OB-fold nucleic acid binding domain VCSRO5_0639 PF14579 Helix-hairpin-helix motif VCSRO5_0640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VCSRO5_0641 PF01171 PP-loop family VCSRO5_0641 PF09179 TilS substrate binding domain VCSRO5_0641 PF11734 TilS substrate C-terminal domain VCSRO5_0642 PF00034 Cytochrome c VCSRO5_0643 PF05870 Phenolic acid decarboxylase (PAD) VCSRO5_0644 PF00543 Nitrogen regulatory protein P-II VCSRO5_0645 PF03372 Endonuclease/Exonuclease/phosphatase family VCSRO5_0646 PF01464 Transglycosylase SLT domain VCSRO5_0646 PF01476 LysM domain VCSRO5_0647 PF00753 Metallo-beta-lactamase superfamily VCSRO5_0647 PF16123 Hydroxyacylglutathione hydrolase C-terminus VCSRO5_0648 PF08241 Methyltransferase domain VCSRO5_0649 PF00075 RNase H VCSRO5_0650 PF00929 Exonuclease VCSRO5_0652 PF09317 Domain of unknown function (DUF1974) VCSRO5_0652 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCSRO5_0652 PF02770 Acyl-CoA dehydrogenase, middle domain VCSRO5_0652 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCSRO5_0653 PF13580 SIS domain VCSRO5_0654 PF13230 Glutamine amidotransferases class-II VCSRO5_0655 PF00551 Formyl transferase VCSRO5_0656 PF02769 AIR synthase related protein, C-terminal domain VCSRO5_0656 PF00586 AIR synthase related protein, N-terminal domain VCSRO5_0658 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0659 PF00849 RNA pseudouridylate synthase VCSRO5_0659 PF01479 S4 domain VCSRO5_0660 PF01713 Smr domain VCSRO5_0664 PF02838 Glycosyl hydrolase family 20, domain 2 VCSRO5_0664 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VCSRO5_0664 PF03173 Putative carbohydrate binding domain VCSRO5_0664 PF00728 Glycosyl hydrolase family 20, catalytic domain VCSRO5_0666 PF00403 Heavy-metal-associated domain VCSRO5_0667 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO5_0668 PF00691 OmpA family VCSRO5_0668 PF01389 OmpA-like transmembrane domain VCSRO5_0670 PF07715 TonB-dependent Receptor Plug Domain VCSRO5_0671 PF08021 Siderophore-interacting FAD-binding domain VCSRO5_0671 PF04954 Siderophore-interacting protein VCSRO5_0672 PF08242 Methyltransferase domain VCSRO5_0672 PF00550 Phosphopantetheine attachment site VCSRO5_0672 PF00501 AMP-binding enzyme VCSRO5_0672 PF00668 Condensation domain VCSRO5_0679 PF01584 CheW-like domain VCSRO5_0679 PF00072 Response regulator receiver domain VCSRO5_0680 PF01739 CheR methyltransferase, SAM binding domain VCSRO5_0680 PF03705 CheR methyltransferase, all-alpha domain VCSRO5_0681 PF00460 Flagella basal body rod protein VCSRO5_0682 PF00460 Flagella basal body rod protein VCSRO5_0682 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO5_0683 PF03963 Flagellar hook capping protein - N-terminal region VCSRO5_0683 PF13860 FlgD Ig-like domain VCSRO5_0683 PF13861 FlgD Tudor-like domain VCSRO5_0684 PF07559 Flagellar basal body protein FlaE VCSRO5_0684 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO5_0684 PF00460 Flagella basal body rod protein VCSRO5_0685 PF00460 Flagella basal body rod protein VCSRO5_0685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO5_0686 PF00460 Flagella basal body rod protein VCSRO5_0686 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO5_0687 PF02107 Flagellar L-ring protein VCSRO5_0688 PF02119 Flagellar P-ring protein VCSRO5_0689 PF10135 Rod binding protein VCSRO5_0689 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VCSRO5_0690 PF07196 Flagellin hook IN motif VCSRO5_0690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO5_0692 PF07196 Flagellin hook IN motif VCSRO5_0692 PF00669 Bacterial flagellin N-terminal helical region VCSRO5_0692 PF00700 Bacterial flagellin C-terminal helical region VCSRO5_0693 PF00700 Bacterial flagellin C-terminal helical region VCSRO5_0693 PF07196 Flagellin hook IN motif VCSRO5_0693 PF00669 Bacterial flagellin N-terminal helical region VCSRO5_0710 PF06071 Protein of unknown function (DUF933) VCSRO5_0710 PF01926 50S ribosome-binding GTPase VCSRO5_0711 PF01195 Peptidyl-tRNA hydrolase VCSRO5_0712 PF14572 Phosphoribosyl synthetase-associated domain VCSRO5_0712 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VCSRO5_0713 PF08544 GHMP kinases C terminal VCSRO5_0713 PF00288 GHMP kinases N terminal domain VCSRO5_0714 PF03550 Outer membrane lipoprotein LolB VCSRO5_0715 PF01488 Shikimate / quinate 5-dehydrogenase VCSRO5_0715 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VCSRO5_0715 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VCSRO5_0716 PF03462 PCRF domain VCSRO5_0716 PF00472 RF-1 domain VCSRO5_0717 PF17827 PrmC N-terminal domain VCSRO5_0717 PF13847 Methyltransferase domain VCSRO5_0718 PF04247 Invasion gene expression up-regulator, SirB VCSRO5_0719 PF13369 Transglutaminase-like superfamily VCSRO5_0720 PF00793 DAHP synthetase I family VCSRO5_0721 PF02872 5'-nucleotidase, C-terminal domain VCSRO5_0721 PF00149 Calcineurin-like phosphoesterase VCSRO5_0722 PF04073 Aminoacyl-tRNA editing domain VCSRO5_0723 PF00860 Permease family VCSRO5_0726 PF03358 NADPH-dependent FMN reductase VCSRO5_0727 PF03960 ArsC family VCSRO5_0728 PF01435 Peptidase family M48 VCSRO5_0728 PF13181 Tetratricopeptide repeat VCSRO5_0730 PF01594 AI-2E family transporter VCSRO5_0731 PF02743 Cache domain VCSRO5_0731 PF00672 HAMP domain VCSRO5_0731 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_0732 PF00578 AhpC/TSA family VCSRO5_0734 PF00701 Dihydrodipicolinate synthetase family VCSRO5_0735 PF06804 NlpB/DapX lipoprotein VCSRO5_0737 PF02557 D-alanyl-D-alanine carboxypeptidase VCSRO5_0738 PF07687 Peptidase dimerisation domain VCSRO5_0738 PF01546 Peptidase family M20/M25/M40 VCSRO5_0739 PF03960 ArsC family VCSRO5_0742 PF11143 Protein of unknown function (DUF2919) VCSRO5_0743 PF04261 Dyp-type peroxidase family VCSRO5_0744 PF01609 Transposase DDE domain VCSRO5_0744 PF13006 Insertion element 4 transposase N-terminal VCSRO5_0745 PF07196 Flagellin hook IN motif VCSRO5_0745 PF00700 Bacterial flagellin C-terminal helical region VCSRO5_0745 PF00669 Bacterial flagellin N-terminal helical region VCSRO5_0746 PF00700 Bacterial flagellin C-terminal helical region VCSRO5_0746 PF07196 Flagellin hook IN motif VCSRO5_0746 PF00669 Bacterial flagellin N-terminal helical region VCSRO5_0747 PF00700 Bacterial flagellin C-terminal helical region VCSRO5_0747 PF07196 Flagellin hook IN motif VCSRO5_0747 PF00669 Bacterial flagellin N-terminal helical region VCSRO5_0748 PF03646 FlaG protein VCSRO5_0749 PF07195 Flagellar hook-associated protein 2 C-terminus VCSRO5_0749 PF07196 Flagellin hook IN motif VCSRO5_0749 PF02465 Flagellar hook-associated protein 2 N-terminus VCSRO5_0751 PF02561 Flagellar protein FliS VCSRO5_0752 PF00158 Sigma-54 interaction domain VCSRO5_0752 PF02954 Bacterial regulatory protein, Fis family VCSRO5_0752 PF06490 Flagellar regulatory protein FleQ VCSRO5_0753 PF13188 PAS domain VCSRO5_0753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0753 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_0754 PF02954 Bacterial regulatory protein, Fis family VCSRO5_0754 PF00072 Response regulator receiver domain VCSRO5_0754 PF00158 Sigma-54 interaction domain VCSRO5_0755 PF02049 Flagellar hook-basal body complex protein FliE VCSRO5_0756 PF08345 Flagellar M-ring protein C-terminal VCSRO5_0756 PF01514 Secretory protein of YscJ/FliF family VCSRO5_0757 PF14841 FliG middle domain VCSRO5_0757 PF01706 FliG C-terminal domain VCSRO5_0757 PF14842 FliG N-terminal domain VCSRO5_0758 PF02108 Flagellar assembly protein FliH VCSRO5_0759 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO5_0759 PF18269 T3SS EscN ATPase C-terminal domain VCSRO5_0762 PF03748 Flagellar basal body-associated protein FliL VCSRO5_0763 PF02154 Flagellar motor switch protein FliM VCSRO5_0763 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VCSRO5_0764 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VCSRO5_0765 PF04347 Flagellar biosynthesis protein, FliO VCSRO5_0766 PF00813 FliP family VCSRO5_0767 PF01313 Bacterial export proteins, family 3 VCSRO5_0768 PF01311 Bacterial export proteins, family 1 VCSRO5_0769 PF01312 FlhB HrpN YscU SpaS Family VCSRO5_0770 PF01713 Smr domain VCSRO5_0771 PF05175 Methyltransferase small domain VCSRO5_0772 PF01264 Chorismate synthase VCSRO5_0773 PF03458 UPF0126 domain VCSRO5_0774 PF04315 Elongation factor P hydroxylase VCSRO5_0775 PF08891 YfcL protein VCSRO5_0776 PF03358 NADPH-dependent FMN reductase VCSRO5_0777 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VCSRO5_0777 PF01266 FAD dependent oxidoreductase VCSRO5_0778 PF00109 Beta-ketoacyl synthase, N-terminal domain VCSRO5_0778 PF02801 Beta-ketoacyl synthase, C-terminal domain VCSRO5_0779 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO5_0779 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO5_0779 PF11890 Domain of unknown function (DUF3410) VCSRO5_0780 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO5_0780 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO5_0781 PF01475 Ferric uptake regulator family VCSRO5_0783 PF03466 LysR substrate binding domain VCSRO5_0783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_0784 PF03788 LrgA family VCSRO5_0786 PF00258 Flavodoxin VCSRO5_0788 PF12697 Alpha/beta hydrolase family VCSRO5_0789 PF03925 SeqA protein C-terminal domain VCSRO5_0789 PF17206 SeqA protein N-terminal domain VCSRO5_0790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO5_0790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO5_0790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO5_0790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO5_0792 PF01784 NIF3 (NGG1p interacting factor 3) VCSRO5_0793 PF00285 Citrate synthase, C-terminal domain VCSRO5_0794 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VCSRO5_0795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VCSRO5_0796 PF00890 FAD binding domain VCSRO5_0796 PF02910 Fumarate reductase flavoprotein C-term VCSRO5_0797 PF13085 2Fe-2S iron-sulfur cluster binding domain VCSRO5_0798 PF16078 2-oxoglutarate dehydrogenase N-terminus VCSRO5_0798 PF00676 Dehydrogenase E1 component VCSRO5_0798 PF16870 2-oxoglutarate dehydrogenase C-terminal VCSRO5_0798 PF02779 Transketolase, pyrimidine binding domain VCSRO5_0799 PF00364 Biotin-requiring enzyme VCSRO5_0799 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VCSRO5_0799 PF02817 e3 binding domain VCSRO5_0800 PF00549 CoA-ligase VCSRO5_0800 PF08442 ATP-grasp domain VCSRO5_0801 PF00549 CoA-ligase VCSRO5_0801 PF02629 CoA binding domain VCSRO5_0802 PF00950 ABC 3 transport family VCSRO5_0803 PF00005 ABC transporter VCSRO5_0804 PF01297 Zinc-uptake complex component A periplasmic VCSRO5_0805 PF12833 Helix-turn-helix domain VCSRO5_0805 PF02311 AraC-like ligand binding domain VCSRO5_0806 PF04023 FeoA domain VCSRO5_0807 PF02421 Ferrous iron transport protein B VCSRO5_0807 PF07670 Nucleoside recognition VCSRO5_0807 PF07664 Ferrous iron transport protein B C terminus VCSRO5_0810 PF03485 Arginyl tRNA synthetase N terminal domain VCSRO5_0810 PF05746 DALR anticodon binding domain VCSRO5_0810 PF00750 tRNA synthetases class I (R) VCSRO5_0813 PF00675 Insulinase (Peptidase family M16) VCSRO5_0813 PF05193 Peptidase M16 inactive domain VCSRO5_0814 PF00300 Histidine phosphatase superfamily (branch 1) VCSRO5_0815 PF00771 FHIPEP family VCSRO5_0816 PF00448 SRP54-type protein, GTPase domain VCSRO5_0817 PF10609 NUBPL iron-transfer P-loop NTPase VCSRO5_0818 PF04542 Sigma-70 region 2 VCSRO5_0818 PF04539 Sigma-70 region 3 VCSRO5_0818 PF04545 Sigma-70, region 4 VCSRO5_0819 PF00072 Response regulator receiver domain VCSRO5_0820 PF04344 Chemotaxis phosphatase, CheZ VCSRO5_0821 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO5_0821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0821 PF01627 Hpt domain VCSRO5_0821 PF00072 Response regulator receiver domain VCSRO5_0821 PF01584 CheW-like domain VCSRO5_0822 PF00072 Response regulator receiver domain VCSRO5_0822 PF01339 CheB methylesterase VCSRO5_0823 PF13614 AAA domain VCSRO5_0825 PF01584 CheW-like domain VCSRO5_0827 PF00005 ABC transporter VCSRO5_0828 PF03379 CcmB protein VCSRO5_0829 PF01578 Cytochrome C assembly protein VCSRO5_0830 PF04995 Heme exporter protein D (CcmD) VCSRO5_0831 PF03100 CcmE VCSRO5_0832 PF01578 Cytochrome C assembly protein VCSRO5_0832 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VCSRO5_0833 PF08534 Redoxin VCSRO5_0834 PF03918 Cytochrome C biogenesis protein VCSRO5_0836 PF04333 MlaA lipoprotein VCSRO5_0839 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VCSRO5_0839 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VCSRO5_0840 PF00462 Glutaredoxin VCSRO5_0841 PF01131 DNA topoisomerase VCSRO5_0841 PF01751 Toprim domain VCSRO5_0842 PF00850 Histone deacetylase domain VCSRO5_0845 PF00884 Sulfatase VCSRO5_0845 PF11893 Domain of unknown function (DUF3413) VCSRO5_0846 PF07208 Protein of unknown function (DUF1414) VCSRO5_0847 PF04245 37-kD nucleoid-associated bacterial protein VCSRO5_0849 PF03553 Na+/H+ antiporter family VCSRO5_0850 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO5_0850 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO5_0851 PF01914 MarC family integral membrane protein VCSRO5_0852 PF00465 Iron-containing alcohol dehydrogenase VCSRO5_0852 PF00171 Aldehyde dehydrogenase family VCSRO5_0854 PF01740 STAS domain VCSRO5_0854 PF00916 Sulfate permease family VCSRO5_0855 PF12111 Polyribonucleotide phosphorylase C terminal VCSRO5_0855 PF10150 Ribonuclease E/G family VCSRO5_0855 PF00575 S1 RNA binding domain VCSRO5_0856 PF00849 RNA pseudouridylate synthase VCSRO5_0856 PF01479 S4 domain VCSRO5_0857 PF02545 Maf-like protein VCSRO5_0858 PF02620 Large ribosomal RNA subunit accumulation protein YceD VCSRO5_0859 PF01783 Ribosomal L32p protein family VCSRO5_0860 PF02504 Fatty acid synthesis protein VCSRO5_0861 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCSRO5_0861 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VCSRO5_0862 PF00698 Acyl transferase domain VCSRO5_0864 PF00550 Phosphopantetheine attachment site VCSRO5_0865 PF00109 Beta-ketoacyl synthase, N-terminal domain VCSRO5_0865 PF02801 Beta-ketoacyl synthase, C-terminal domain VCSRO5_0866 PF01063 Amino-transferase class IV VCSRO5_0867 PF02618 YceG-like family VCSRO5_0868 PF02223 Thymidylate kinase VCSRO5_0869 PF09115 DNA polymerase III, delta subunit, C terminal VCSRO5_0870 PF01026 TatD related DNase VCSRO5_0871 PF00367 phosphotransferase system, EIIB VCSRO5_0871 PF02378 Phosphotransferase system, EIIC VCSRO5_0873 PF00209 Sodium:neurotransmitter symporter family VCSRO5_0876 PF01734 Patatin-like phospholipase VCSRO5_0877 PF00224 Pyruvate kinase, barrel domain VCSRO5_0877 PF02887 Pyruvate kinase, alpha/beta domain VCSRO5_0878 PF00480 ROK family VCSRO5_0879 PF01584 CheW-like domain VCSRO5_0879 PF00072 Response regulator receiver domain VCSRO5_0882 PF13847 Methyltransferase domain VCSRO5_0884 PF01263 Aldose 1-epimerase VCSRO5_0885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO5_0885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO5_0886 PF01641 SelR domain VCSRO5_0888 PF07023 Protein of unknown function (DUF1315) VCSRO5_0889 PF17763 Glutaminase/Asparaginase C-terminal domain VCSRO5_0889 PF00710 Asparaginase, N-terminal VCSRO5_0890 PF01343 Peptidase family S49 VCSRO5_0891 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCSRO5_0891 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_0892 PF01842 ACT domain VCSRO5_0892 PF00551 Formyl transferase VCSRO5_0894 PF13307 Helicase C-terminal domain VCSRO5_0894 PF04851 Type III restriction enzyme, res subunit VCSRO5_0895 PF00814 Glycoprotease family VCSRO5_0898 PF00561 alpha/beta hydrolase fold VCSRO5_0899 PF00501 AMP-binding enzyme VCSRO5_0899 PF13193 AMP-binding enzyme C-terminal domain VCSRO5_0900 PF00501 AMP-binding enzyme VCSRO5_0900 PF13193 AMP-binding enzyme C-terminal domain VCSRO5_0901 PF01612 3'-5' exonuclease VCSRO5_0901 PF00570 HRDC domain VCSRO5_0904 PF13286 Phosphohydrolase-associated domain VCSRO5_0904 PF01966 HD domain VCSRO5_0906 PF00155 Aminotransferase class I and II VCSRO5_0907 PF00425 chorismate binding enzyme VCSRO5_0908 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO5_0908 PF16582 Middle domain of thiamine pyrophosphate VCSRO5_0908 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO5_0909 PF12697 Alpha/beta hydrolase family VCSRO5_0910 PF00378 Enoyl-CoA hydratase/isomerase VCSRO5_0911 PF13378 Enolase C-terminal domain-like VCSRO5_0912 PF00501 AMP-binding enzyme VCSRO5_0912 PF13193 AMP-binding enzyme C-terminal domain VCSRO5_0913 PF03594 Benzoate membrane transport protein VCSRO5_0914 PF07690 Major Facilitator Superfamily VCSRO5_0919 PF04170 NlpE N-terminal domain VCSRO5_0920 PF03776 Septum formation topological specificity factor MinE VCSRO5_0921 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VCSRO5_0922 PF03775 Septum formation inhibitor MinC, C-terminal domain VCSRO5_0922 PF05209 Septum formation inhibitor MinC, N-terminal domain VCSRO5_0923 PF05166 YcgL domain VCSRO5_0924 PF13406 Transglycosylase SLT domain VCSRO5_0925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_0925 PF03466 LysR substrate binding domain VCSRO5_0926 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO5_0926 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO5_0926 PF07670 Nucleoside recognition VCSRO5_0928 PF06483 Chitinase C VCSRO5_0928 PF00704 Glycosyl hydrolases family 18 VCSRO5_0929 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO5_0930 PF01568 Molydopterin dinucleotide binding domain VCSRO5_0930 PF00384 Molybdopterin oxidoreductase VCSRO5_0930 PF18364 Molybdopterin oxidoreductase N-terminal domain VCSRO5_0932 PF03466 LysR substrate binding domain VCSRO5_0932 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_0934 PF01494 FAD binding domain VCSRO5_0935 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VCSRO5_0936 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VCSRO5_0936 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VCSRO5_0946 PF00563 EAL domain VCSRO5_0946 PF13188 PAS domain VCSRO5_0946 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_0946 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_0949 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VCSRO5_0950 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO5_0951 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VCSRO5_0952 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCSRO5_0953 PF00072 Response regulator receiver domain VCSRO5_0953 PF00158 Sigma-54 interaction domain VCSRO5_0953 PF02954 Bacterial regulatory protein, Fis family VCSRO5_0954 PF02743 Cache domain VCSRO5_0954 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_0954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_0955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO5_0955 PF05698 Bacterial trigger factor protein (TF) C-terminus VCSRO5_0955 PF05697 Bacterial trigger factor protein (TF) VCSRO5_0956 PF00574 Clp protease VCSRO5_0957 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO5_0957 PF06689 ClpX C4-type zinc finger VCSRO5_0957 PF07724 AAA domain (Cdc48 subfamily) VCSRO5_0958 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO5_0958 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO5_0958 PF02190 ATP-dependent protease La (LON) substrate-binding domain VCSRO5_0959 PF00216 Bacterial DNA-binding protein VCSRO5_0960 PF13145 PPIC-type PPIASE domain VCSRO5_0962 PF02224 Cytidylate kinase VCSRO5_0963 PF00575 S1 RNA binding domain VCSRO5_0964 PF00216 Bacterial DNA-binding protein VCSRO5_0965 PF06305 Lipopolysaccharide assembly protein A domain VCSRO5_0966 PF18073 Rubredoxin metal binding domain VCSRO5_0967 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VCSRO5_0968 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VCSRO5_0970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_0970 PF03466 LysR substrate binding domain VCSRO5_0972 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VCSRO5_0972 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VCSRO5_0973 PF01037 Lrp/AsnC ligand binding domain VCSRO5_0974 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VCSRO5_0974 PF17854 FtsK alpha domain VCSRO5_0974 PF09397 Ftsk gamma domain VCSRO5_0974 PF01580 FtsK/SpoIIIE family VCSRO5_0975 PF02600 Disulfide bond formation protein DsbB VCSRO5_0976 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VCSRO5_0977 PF07840 FadR C-terminal domain VCSRO5_0977 PF00392 Bacterial regulatory proteins, gntR family VCSRO5_0979 PF00672 HAMP domain VCSRO5_0979 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_0980 PF01230 HIT domain VCSRO5_0983 PF13036 Peptidoglycan-synthase activator LpoB VCSRO5_0983 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VCSRO5_0985 PF05728 Uncharacterised protein family (UPF0227) VCSRO5_0986 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_0990 PF02559 CarD-like/TRCF domain VCSRO5_0990 PF00270 DEAD/DEAH box helicase VCSRO5_0990 PF00271 Helicase conserved C-terminal domain VCSRO5_0990 PF03461 TRCF domain VCSRO5_0990 PF17757 UvrB interaction domain VCSRO5_0992 PF02687 FtsX-like permease family VCSRO5_0992 PF12704 MacB-like periplasmic core domain VCSRO5_0993 PF00005 ABC transporter VCSRO5_0994 PF02687 FtsX-like permease family VCSRO5_0994 PF12704 MacB-like periplasmic core domain VCSRO5_0996 PF13567 Domain of unknown function (DUF4131) VCSRO5_0996 PF00753 Metallo-beta-lactamase superfamily VCSRO5_0996 PF03772 Competence protein VCSRO5_0997 PF00664 ABC transporter transmembrane region VCSRO5_0997 PF00005 ABC transporter VCSRO5_0998 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VCSRO5_0999 PF03966 Trm112p-like protein VCSRO5_1000 PF02348 Cytidylyltransferase VCSRO5_1001 PF04293 SpoVR like protein VCSRO5_1002 PF04285 Protein of unknown function (DUF444) VCSRO5_1003 PF08298 PrkA AAA domain VCSRO5_1003 PF06798 PrkA serine protein kinase C-terminal domain VCSRO5_1004 PF03887 YfbU domain VCSRO5_1006 PF04055 Radical SAM superfamily VCSRO5_1007 PF12729 Four helix bundle sensory module for signal transduction VCSRO5_1007 PF00672 HAMP domain VCSRO5_1007 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1009 PF01228 Glycine radical VCSRO5_1009 PF02901 Pyruvate formate lyase-like VCSRO5_1012 PF00005 ABC transporter VCSRO5_1013 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_1014 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1015 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1016 PF03372 Endonuclease/Exonuclease/phosphatase family VCSRO5_1017 PF00672 HAMP domain VCSRO5_1017 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1018 PF10689 Protein of unknown function (DUF2496) VCSRO5_1019 PF07445 Primosomal replication protein priC VCSRO5_1020 PF01925 Sulfite exporter TauE/SafE VCSRO5_1021 PF13307 Helicase C-terminal domain VCSRO5_1021 PF06733 DEAD_2 VCSRO5_1022 PF13609 Gram-negative porin VCSRO5_1023 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO5_1024 PF02810 SEC-C motif VCSRO5_1025 PF00563 EAL domain VCSRO5_1025 PF08668 HDOD domain VCSRO5_1026 PF00149 Calcineurin-like phosphoesterase VCSRO5_1027 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VCSRO5_1028 PF01406 tRNA synthetases class I (C) catalytic domain VCSRO5_1028 PF09190 DALR domain VCSRO5_1029 PF02075 Crossover junction endodeoxyribonuclease RuvC VCSRO5_1030 PF07499 RuvA, C-terminal domain VCSRO5_1030 PF01330 RuvA N terminal domain VCSRO5_1031 PF05491 RuvB C-terminal winged helix domain VCSRO5_1031 PF17864 RuvB AAA lid domain VCSRO5_1031 PF05496 Holliday junction DNA helicase RuvB P-loop domain VCSRO5_1033 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO5_1034 PF02322 Cytochrome bd terminal oxidase subunit II VCSRO5_1035 PF08173 Membrane bound YbgT-like protein VCSRO5_1036 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) VCSRO5_1037 PF03061 Thioesterase superfamily VCSRO5_1038 PF01618 MotA/TolQ/ExbB proton channel family VCSRO5_1039 PF02472 Biopolymer transport protein ExbD/TolR VCSRO5_1041 PF04052 TolB amino-terminal domain VCSRO5_1041 PF07676 WD40-like Beta Propeller Repeat VCSRO5_1042 PF00691 OmpA family VCSRO5_1044 PF02445 Quinolinate synthetase A protein VCSRO5_1046 PF00072 Response regulator receiver domain VCSRO5_1046 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1046 PF09308 LuxQ, periplasmic VCSRO5_1046 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1047 PF06610 L-alanine exporter VCSRO5_1048 PF00171 Aldehyde dehydrogenase family VCSRO5_1049 PF02954 Bacterial regulatory protein, Fis family VCSRO5_1049 PF00158 Sigma-54 interaction domain VCSRO5_1049 PF01590 GAF domain VCSRO5_1050 PF09905 DNA-binding protein VF530 VCSRO5_1052 PF00875 DNA photolyase VCSRO5_1052 PF03441 FAD binding domain of DNA photolyase VCSRO5_1054 PF13426 PAS domain VCSRO5_1054 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1054 PF00563 EAL domain VCSRO5_1057 PF07728 AAA domain (dynein-related subfamily) VCSRO5_1057 PF12102 Domain of unknown function (DUF3578) VCSRO5_1064 PF13088 BNR repeat-like domain VCSRO5_1064 PF09264 Vibrio cholerae sialidase, lectin insertion VCSRO5_1065 PF01979 Amidohydrolase family VCSRO5_1066 PF00480 ROK family VCSRO5_1067 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VCSRO5_1068 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO5_1069 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VCSRO5_1070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCSRO5_1071 PF00701 Dihydrodipicolinate synthetase family VCSRO5_1072 PF01418 Helix-turn-helix domain, rpiR family VCSRO5_1072 PF01380 SIS domain VCSRO5_1073 PF01344 Kelch motif VCSRO5_1074 PF07646 Kelch motif VCSRO5_1076 PF02368 Bacterial Ig-like domain (group 2) VCSRO5_1076 PF11999 Protein of unknown function (DUF3494) VCSRO5_1081 PF00561 alpha/beta hydrolase fold VCSRO5_1081 PF08386 TAP-like protein VCSRO5_1082 PF03347 Vibrio thermostable direct hemolysin VCSRO5_1083 PF13322 Domain of unknown function (DUF4092) VCSRO5_1083 PF17291 N-terminal domain of M60-like peptidases VCSRO5_1083 PF13402 Peptidase M60, enhancin and enhancin-like VCSRO5_1104 PF00771 FHIPEP family VCSRO5_1105 PF01312 FlhB HrpN YscU SpaS Family VCSRO5_1106 PF00691 OmpA family VCSRO5_1111 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_1113 PF00813 FliP family VCSRO5_1116 PF00263 Bacterial type II and III secretion system protein VCSRO5_1116 PF03958 Bacterial type II/III secretion system short domain VCSRO5_1117 PF18269 T3SS EscN ATPase C-terminal domain VCSRO5_1117 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCSRO5_1117 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO5_1126 PF03545 Yersinia virulence determinant (YopE) VCSRO5_1126 PF09020 YopE, N terminal VCSRO5_1128 PF00589 Phage integrase family VCSRO5_1128 PF13356 Arm DNA-binding domain VCSRO5_1130 PF00873 AcrB/AcrD/AcrF family VCSRO5_1131 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO5_1133 PF02470 MlaD protein VCSRO5_1134 PF04403 Paraquat-inducible protein A VCSRO5_1135 PF00924 Mechanosensitive ion channel VCSRO5_1135 PF05552 Conserved TM helix VCSRO5_1136 PF08362 YcdC-like protein, C-terminal region VCSRO5_1136 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_1137 PF00171 Aldehyde dehydrogenase family VCSRO5_1138 PF07383 Protein of unknown function (DUF1496) VCSRO5_1140 PF16295 Tetracyclin repressor-like, C-terminal domain VCSRO5_1140 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_1141 PF09317 Domain of unknown function (DUF1974) VCSRO5_1141 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCSRO5_1141 PF02770 Acyl-CoA dehydrogenase, middle domain VCSRO5_1141 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCSRO5_1142 PF12241 Trans-2-enoyl-CoA reductase catalytic region VCSRO5_1142 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VCSRO5_1142 PF07055 Enoyl reductase FAD binding domain VCSRO5_1143 PF01609 Transposase DDE domain VCSRO5_1143 PF13006 Insertion element 4 transposase N-terminal VCSRO5_1144 PF01176 Translation initiation factor 1A / IF-1 VCSRO5_1145 PF04376 Arginine-tRNA-protein transferase, N terminus VCSRO5_1145 PF04377 Arginine-tRNA-protein transferase, C terminus VCSRO5_1146 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VCSRO5_1147 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VCSRO5_1148 PF10692 Protein of unknown function (DUF2498) VCSRO5_1149 PF01131 DNA topoisomerase VCSRO5_1149 PF01751 Toprim domain VCSRO5_1149 PF01396 Topoisomerase DNA binding C4 zinc finger VCSRO5_1149 PF08272 Topoisomerase I zinc-ribbon-like VCSRO5_1150 PF00483 Nucleotidyl transferase VCSRO5_1151 PF08323 Starch synthase catalytic domain VCSRO5_1151 PF00534 Glycosyl transferases group 1 VCSRO5_1155 PF04993 TfoX N-terminal domain VCSRO5_1155 PF04994 TfoX C-terminal domain VCSRO5_1156 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_1157 PF02613 Nitrate reductase delta subunit VCSRO5_1158 PF00072 Response regulator receiver domain VCSRO5_1158 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_1159 PF02698 DUF218 domain VCSRO5_1160 PF13847 Methyltransferase domain VCSRO5_1161 PF03882 MukF winged-helix domain VCSRO5_1161 PF17193 MukF C-terminal domain VCSRO5_1161 PF17192 MukF middle domain VCSRO5_1162 PF04288 MukE-like family VCSRO5_1163 PF04310 MukB N-terminal VCSRO5_1163 PF16330 MukB hinge domain VCSRO5_1164 PF00465 Iron-containing alcohol dehydrogenase VCSRO5_1165 PF06719 AraC-type transcriptional regulator N-terminus VCSRO5_1165 PF12833 Helix-turn-helix domain VCSRO5_1167 PF01037 Lrp/AsnC ligand binding domain VCSRO5_1168 PF01810 LysE type translocator VCSRO5_1169 PF08497 Radical SAM N-terminal VCSRO5_1169 PF11842 Domain of unknown function (DUF3362) VCSRO5_1169 PF04055 Radical SAM superfamily VCSRO5_1170 PF00563 EAL domain VCSRO5_1170 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1170 PF08447 PAS fold VCSRO5_1170 PF08448 PAS fold VCSRO5_1171 PF00675 Insulinase (Peptidase family M16) VCSRO5_1171 PF05193 Peptidase M16 inactive domain VCSRO5_1174 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_1174 PF03466 LysR substrate binding domain VCSRO5_1175 PF08267 Cobalamin-independent synthase, N-terminal domain VCSRO5_1175 PF01717 Cobalamin-independent synthase, Catalytic domain VCSRO5_1177 PF03795 YCII-related domain VCSRO5_1178 PF03061 Thioesterase superfamily VCSRO5_1179 PF04279 Intracellular septation protein A VCSRO5_1181 PF02698 DUF218 domain VCSRO5_1182 PF01370 NAD dependent epimerase/dehydratase family VCSRO5_1184 PF01226 Formate/nitrite transporter VCSRO5_1185 PF06796 Periplasmic nitrate reductase protein NapE VCSRO5_1186 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO5_1187 PF01568 Molydopterin dinucleotide binding domain VCSRO5_1187 PF18364 Molybdopterin oxidoreductase N-terminal domain VCSRO5_1187 PF00384 Molybdopterin oxidoreductase VCSRO5_1188 PF18364 Molybdopterin oxidoreductase N-terminal domain VCSRO5_1188 PF00384 Molybdopterin oxidoreductase VCSRO5_1188 PF01568 Molydopterin dinucleotide binding domain VCSRO5_1191 PF01368 DHH family VCSRO5_1191 PF02833 DHHA2 domain VCSRO5_1194 PF00005 ABC transporter VCSRO5_1195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_1195 PF00005 ABC transporter VCSRO5_1196 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1196 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO5_1197 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1198 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO5_1199 PF02954 Bacterial regulatory protein, Fis family VCSRO5_1199 PF00158 Sigma-54 interaction domain VCSRO5_1200 PF04012 PspA/IM30 family VCSRO5_1203 PF00529 HlyD membrane-fusion protein of T1SS VCSRO5_1203 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO5_1204 PF13533 Biotin-lipoyl like VCSRO5_1205 PF00873 AcrB/AcrD/AcrF family VCSRO5_1206 PF03352 Methyladenine glycosylase VCSRO5_1207 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO5_1208 PF13091 PLD-like domain VCSRO5_1208 PF13396 Phospholipase_D-nuclease N-terminal VCSRO5_1209 PF00209 Sodium:neurotransmitter symporter family VCSRO5_1210 PF00849 RNA pseudouridylate synthase VCSRO5_1211 PF01066 CDP-alcohol phosphatidyltransferase VCSRO5_1212 PF00005 ABC transporter VCSRO5_1213 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1214 PF13416 Bacterial extracellular solute-binding protein VCSRO5_1216 PF06945 Protein of unknown function (DUF1289) VCSRO5_1219 PF00005 ABC transporter VCSRO5_1220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO5_1221 PF03222 Tryptophan/tyrosine permease family VCSRO5_1224 PF03448 MgtE intracellular N domain VCSRO5_1224 PF01769 Divalent cation transporter VCSRO5_1224 PF00571 CBS domain VCSRO5_1225 PF00072 Response regulator receiver domain VCSRO5_1225 PF09308 LuxQ, periplasmic VCSRO5_1225 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1226 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1226 PF00563 EAL domain VCSRO5_1226 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_1228 PF08453 Peptidase family M9 N-terminal VCSRO5_1228 PF01752 Collagenase VCSRO5_1228 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO5_1229 PF00089 Trypsin VCSRO5_1230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO5_1230 PF12793 Sugar transport-related sRNA regulator N-term VCSRO5_1234 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1234 PF00672 HAMP domain VCSRO5_1234 PF12729 Four helix bundle sensory module for signal transduction VCSRO5_1236 PF01590 GAF domain VCSRO5_1236 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1236 PF00563 EAL domain VCSRO5_1236 PF00360 Phytochrome region VCSRO5_1237 PF01386 Ribosomal L25p family VCSRO5_1238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1239 PF00072 Response regulator receiver domain VCSRO5_1239 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_1241 PF00271 Helicase conserved C-terminal domain VCSRO5_1241 PF04851 Type III restriction enzyme, res subunit VCSRO5_1242 PF00849 RNA pseudouridylate synthase VCSRO5_1242 PF01479 S4 domain VCSRO5_1243 PF07690 Major Facilitator Superfamily VCSRO5_1245 PF13460 NAD(P)H-binding VCSRO5_1245 PF11066 Protein of unknown function (DUF2867) VCSRO5_1246 PF01554 MatE VCSRO5_1247 PF00005 ABC transporter VCSRO5_1248 PF12704 MacB-like periplasmic core domain VCSRO5_1248 PF02687 FtsX-like permease family VCSRO5_1250 PF06965 Na+/H+ antiporter 1 VCSRO5_1251 PF00202 Aminotransferase class-III VCSRO5_1252 PF03435 Saccharopine dehydrogenase NADP binding domain VCSRO5_1252 PF16653 Saccharopine dehydrogenase C-terminal domain VCSRO5_1254 PF00691 OmpA family VCSRO5_1254 PF05736 OprF membrane domain VCSRO5_1255 PF02321 Outer membrane efflux protein VCSRO5_1257 PF01609 Transposase DDE domain VCSRO5_1257 PF13006 Insertion element 4 transposase N-terminal VCSRO5_1261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_1261 PF03466 LysR substrate binding domain VCSRO5_1263 PF01863 Protein of unknown function DUF45 VCSRO5_1264 PF05971 RNA methyltransferase VCSRO5_1267 PF04204 Homoserine O-succinyltransferase VCSRO5_1271 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO5_1274 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1274 PF00989 PAS fold VCSRO5_1274 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VCSRO5_1274 PF17203 Single cache domain 3 VCSRO5_1275 PF00072 Response regulator receiver domain VCSRO5_1275 PF12431 Transcriptional regulator VCSRO5_1277 PF00072 Response regulator receiver domain VCSRO5_1277 PF01584 CheW-like domain VCSRO5_1280 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1280 PF00072 Response regulator receiver domain VCSRO5_1284 PF07690 Major Facilitator Superfamily VCSRO5_1285 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VCSRO5_1285 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VCSRO5_1286 PF00288 GHMP kinases N terminal domain VCSRO5_1286 PF10509 Galactokinase galactose-binding signature VCSRO5_1286 PF08544 GHMP kinases C terminal VCSRO5_1287 PF01263 Aldose 1-epimerase VCSRO5_1288 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1289 PF00563 EAL domain VCSRO5_1289 PF17154 Gammaproteobacterial periplasmic sensor domain VCSRO5_1289 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1289 PF00672 HAMP domain VCSRO5_1291 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO5_1291 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO5_1291 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO5_1292 PF03306 Alpha-acetolactate decarboxylase VCSRO5_1293 PF03466 LysR substrate binding domain VCSRO5_1293 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_1294 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) VCSRO5_1295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCSRO5_1295 PF00361 Proton-conducting membrane transporter VCSRO5_1296 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_1296 PF03466 LysR substrate binding domain VCSRO5_1297 PF00501 AMP-binding enzyme VCSRO5_1297 PF13193 AMP-binding enzyme C-terminal domain VCSRO5_1300 PF04266 ASCH domain VCSRO5_1303 PF00206 Lyase VCSRO5_1303 PF10415 Fumarase C C-terminus VCSRO5_1305 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO5_1306 PF02322 Cytochrome bd terminal oxidase subunit II VCSRO5_1307 PF00005 ABC transporter VCSRO5_1307 PF02687 FtsX-like permease family VCSRO5_1307 PF12704 MacB-like periplasmic core domain VCSRO5_1308 PF00005 ABC transporter VCSRO5_1308 PF02687 FtsX-like permease family VCSRO5_1308 PF12704 MacB-like periplasmic core domain VCSRO5_1309 PF02687 FtsX-like permease family VCSRO5_1309 PF12704 MacB-like periplasmic core domain VCSRO5_1311 PF00529 HlyD membrane-fusion protein of T1SS VCSRO5_1313 PF03466 LysR substrate binding domain VCSRO5_1313 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_1314 PF01609 Transposase DDE domain VCSRO5_1314 PF13006 Insertion element 4 transposase N-terminal VCSRO5_1315 PF00141 Peroxidase VCSRO5_1316 PF00232 Glycosyl hydrolase family 1 VCSRO5_1317 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_1318 PF01042 Endoribonuclease L-PSP VCSRO5_1319 PF04074 YhcH/YjgK/YiaL VCSRO5_1320 PF03009 Glycerophosphoryl diester phosphodiesterase family VCSRO5_1321 PF08220 DeoR-like helix-turn-helix domain VCSRO5_1321 PF00455 DeoR C terminal sensor domain VCSRO5_1322 PF00005 ABC transporter VCSRO5_1322 PF17912 MalK OB fold domain VCSRO5_1323 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1324 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1325 PF13416 Bacterial extracellular solute-binding protein VCSRO5_1327 PF01618 MotA/TolQ/ExbB proton channel family VCSRO5_1328 PF01618 MotA/TolQ/ExbB proton channel family VCSRO5_1329 PF02472 Biopolymer transport protein ExbD/TolR VCSRO5_1330 PF03544 Gram-negative bacterial TonB protein C-terminal VCSRO5_1332 PF14743 DNA ligase OB-like domain VCSRO5_1332 PF01068 ATP dependent DNA ligase domain VCSRO5_1334 PF01554 MatE VCSRO5_1336 PF03881 Fructosamine kinase VCSRO5_1338 PF00877 NlpC/P60 family VCSRO5_1339 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1339 PF00672 HAMP domain VCSRO5_1339 PF12729 Four helix bundle sensory module for signal transduction VCSRO5_1341 PF03942 DTW domain VCSRO5_1342 PF00480 ROK family VCSRO5_1344 PF00994 Probable molybdopterin binding domain VCSRO5_1344 PF03454 MoeA C-terminal region (domain IV) VCSRO5_1344 PF03453 MoeA N-terminal region (domain I and II) VCSRO5_1345 PF12804 MobA-like NTP transferase domain VCSRO5_1346 PF08402 TOBE domain VCSRO5_1346 PF00005 ABC transporter VCSRO5_1347 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1348 PF12849 PBP superfamily domain VCSRO5_1349 PF02954 Bacterial regulatory protein, Fis family VCSRO5_1349 PF00072 Response regulator receiver domain VCSRO5_1349 PF00158 Sigma-54 interaction domain VCSRO5_1350 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1350 PF00989 PAS fold VCSRO5_1350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1351 PF00005 ABC transporter VCSRO5_1351 PF12848 ABC transporter VCSRO5_1352 PF02634 FdhD/NarQ family VCSRO5_1356 PF02613 Nitrate reductase delta subunit VCSRO5_1358 PF01568 Molydopterin dinucleotide binding domain VCSRO5_1358 PF00384 Molybdopterin oxidoreductase VCSRO5_1358 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCSRO5_1359 PF13247 4Fe-4S dicluster domain VCSRO5_1362 PF02146 Sir2 family VCSRO5_1363 PF04461 Protein of unknown function (DUF520) VCSRO5_1364 PF00793 DAHP synthetase I family VCSRO5_1367 PF17783 CvfB-like winged helix domain VCSRO5_1367 PF13509 S1 domain VCSRO5_1368 PF01189 16S rRNA methyltransferase RsmB/F VCSRO5_1368 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VCSRO5_1368 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VCSRO5_1369 PF02470 MlaD protein VCSRO5_1370 PF04403 Paraquat-inducible protein A VCSRO5_1371 PF00005 ABC transporter VCSRO5_1371 PF00664 ABC transporter transmembrane region VCSRO5_1372 PF13185 GAF domain VCSRO5_1373 PF04352 ProQ/FINO family VCSRO5_1373 PF17516 ProQ C-terminal domain VCSRO5_1374 PF11818 C-terminal domain of tail specific protease (DUF3340) VCSRO5_1374 PF03572 Peptidase family S41 VCSRO5_1374 PF17804 Tail specific protease N-terminal domain VCSRO5_1374 PF00595 PDZ domain VCSRO5_1376 PF11940 Domain of unknown function (DUF3458) Ig-like fold VCSRO5_1376 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VCSRO5_1376 PF01433 Peptidase family M1 domain VCSRO5_1378 PF05088 Bacterial NAD-glutamate dehydrogenase VCSRO5_1379 PF01180 Dihydroorotate dehydrogenase VCSRO5_1380 PF01180 Dihydroorotate dehydrogenase VCSRO5_1381 PF07126 Cell-division protein ZapC VCSRO5_1383 PF10672 S-adenosylmethionine-dependent methyltransferase VCSRO5_1383 PF02926 THUMP domain VCSRO5_1383 PF01170 Putative RNA methylase family UPF0020 VCSRO5_1385 PF12848 ABC transporter VCSRO5_1385 PF00005 ABC transporter VCSRO5_1385 PF16326 ABC transporter C-terminal domain VCSRO5_1387 PF04957 Ribosome modulation factor VCSRO5_1388 PF07977 FabA-like domain VCSRO5_1389 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO5_1389 PF13654 AAA domain VCSRO5_1390 PF06303 MatP N-terminal domain VCSRO5_1390 PF17414 MatP C-terminal ribbon-helix-helix domain VCSRO5_1431 PF11713 Peptidase C80 family VCSRO5_1431 PF16671 Actin cross-linking domain VCSRO5_1431 PF12146 Serine aminopeptidase, S33 VCSRO5_1431 PF11647 Membrane Localization Domain VCSRO5_1431 PF07634 RtxA repeat VCSRO5_1432 PF02794 RTX toxin acyltransferase family VCSRO5_1434 PF03412 Peptidase C39 family VCSRO5_1434 PF00005 ABC transporter VCSRO5_1434 PF00664 ABC transporter transmembrane region VCSRO5_1436 PF03412 Peptidase C39 family VCSRO5_1436 PF00005 ABC transporter VCSRO5_1436 PF00664 ABC transporter transmembrane region VCSRO5_1437 PF00072 Response regulator receiver domain VCSRO5_1437 PF09308 LuxQ, periplasmic VCSRO5_1437 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1440 PF00115 Cytochrome C and Quinol oxidase polypeptide I VCSRO5_1443 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCSRO5_1443 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VCSRO5_1445 PF00403 Heavy-metal-associated domain VCSRO5_1448 PF13545 Crp-like helix-turn-helix domain VCSRO5_1448 PF00027 Cyclic nucleotide-binding domain VCSRO5_1449 PF00582 Universal stress protein family VCSRO5_1450 PF01171 PP-loop family VCSRO5_1454 PF08402 TOBE domain VCSRO5_1454 PF00005 ABC transporter VCSRO5_1455 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1456 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1457 PF13416 Bacterial extracellular solute-binding protein VCSRO5_1458 PF13416 Bacterial extracellular solute-binding protein VCSRO5_1461 PF01235 Sodium:alanine symporter family VCSRO5_1462 PF01810 LysE type translocator VCSRO5_1466 PF16671 Actin cross-linking domain VCSRO5_1466 PF04717 Type VI secretion system, phage-baseplate injector VCSRO5_1467 PF05638 Type VI secretion system effector, Hcp VCSRO5_1468 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VCSRO5_1469 PF00672 HAMP domain VCSRO5_1469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1469 PF02743 Cache domain VCSRO5_1470 PF07690 Major Facilitator Superfamily VCSRO5_1471 PF00529 HlyD membrane-fusion protein of T1SS VCSRO5_1471 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO5_1472 PF02321 Outer membrane efflux protein VCSRO5_1474 PF00270 DEAD/DEAH box helicase VCSRO5_1474 PF00271 Helicase conserved C-terminal domain VCSRO5_1475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1475 PF08447 PAS fold VCSRO5_1475 PF13426 PAS domain VCSRO5_1476 PF00672 HAMP domain VCSRO5_1476 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1477 PF02743 Cache domain VCSRO5_1477 PF00672 HAMP domain VCSRO5_1477 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1478 PF01584 CheW-like domain VCSRO5_1479 PF01339 CheB methylesterase VCSRO5_1479 PF00072 Response regulator receiver domain VCSRO5_1481 PF01739 CheR methyltransferase, SAM binding domain VCSRO5_1481 PF03705 CheR methyltransferase, all-alpha domain VCSRO5_1482 PF00072 Response regulator receiver domain VCSRO5_1482 PF01627 Hpt domain VCSRO5_1482 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1482 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO5_1482 PF01584 CheW-like domain VCSRO5_1483 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO5_1483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1483 PF01584 CheW-like domain VCSRO5_1483 PF01627 Hpt domain VCSRO5_1483 PF07194 P2 response regulator binding domain VCSRO5_1485 PF00072 Response regulator receiver domain VCSRO5_1486 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1486 PF00672 HAMP domain VCSRO5_1487 PF00893 Small Multidrug Resistance protein VCSRO5_1488 PF03441 FAD binding domain of DNA photolyase VCSRO5_1488 PF00875 DNA photolyase VCSRO5_1489 PF07690 Major Facilitator Superfamily VCSRO5_1490 PF03466 LysR substrate binding domain VCSRO5_1490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_1491 PF01979 Amidohydrolase family VCSRO5_1492 PF10437 Bacterial lipoate protein ligase C-terminus VCSRO5_1492 PF03099 Biotin/lipoate A/B protein ligase family VCSRO5_1493 PF00012 Hsp70 protein VCSRO5_1495 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VCSRO5_1495 PF04408 Helicase associated domain (HA2) VCSRO5_1495 PF00271 Helicase conserved C-terminal domain VCSRO5_1495 PF00270 DEAD/DEAH box helicase VCSRO5_1495 PF11898 Domain of unknown function (DUF3418) VCSRO5_1500 PF00563 EAL domain VCSRO5_1500 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1500 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_1502 PF00012 Hsp70 protein VCSRO5_1503 PF00012 Hsp70 protein VCSRO5_1504 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1504 PF17158 Membrane-associated sensor, integral membrane domain VCSRO5_1506 PF00563 EAL domain VCSRO5_1506 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1506 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_1510 PF06508 Queuosine biosynthesis protein QueC VCSRO5_1511 PF04055 Radical SAM superfamily VCSRO5_1514 PF14824 Sirohaem biosynthesis protein central VCSRO5_1514 PF10414 Sirohaem synthase dimerisation region VCSRO5_1514 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO5_1515 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_1516 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1517 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1518 PF00005 ABC transporter VCSRO5_1519 PF01027 Inhibitor of apoptosis-promoting Bax1 VCSRO5_1520 PF04358 DsrC like protein VCSRO5_1521 PF00708 Acylphosphatase VCSRO5_1522 PF17785 PUA-like domain VCSRO5_1522 PF10672 S-adenosylmethionine-dependent methyltransferase VCSRO5_1523 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1524 PF00462 Glutaredoxin VCSRO5_1524 PF08534 Redoxin VCSRO5_1525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VCSRO5_1525 PF00072 Response regulator receiver domain VCSRO5_1525 PF01627 Hpt domain VCSRO5_1525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1525 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1525 PF00672 HAMP domain VCSRO5_1526 PF00072 Response regulator receiver domain VCSRO5_1527 PF14497 Glutathione S-transferase, C-terminal domain VCSRO5_1527 PF02798 Glutathione S-transferase, N-terminal domain VCSRO5_1529 PF04209 homogentisate 1,2-dioxygenase VCSRO5_1530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO5_1531 PF07687 Peptidase dimerisation domain VCSRO5_1531 PF01546 Peptidase family M20/M25/M40 VCSRO5_1534 PF16177 Acetyl-coenzyme A synthetase N-terminus VCSRO5_1534 PF13193 AMP-binding enzyme C-terminal domain VCSRO5_1534 PF00501 AMP-binding enzyme VCSRO5_1535 PF04303 PrpF protein VCSRO5_1536 PF00694 Aconitase C-terminal domain VCSRO5_1536 PF00330 Aconitase family (aconitate hydratase) VCSRO5_1537 PF00285 Citrate synthase, C-terminal domain VCSRO5_1539 PF00392 Bacterial regulatory proteins, gntR family VCSRO5_1539 PF07729 FCD domain VCSRO5_1542 PF01970 Tripartite tricarboxylate transporter TctA family VCSRO5_1545 PF02653 Branched-chain amino acid transport system / permease component VCSRO5_1546 PF00005 ABC transporter VCSRO5_1547 PF13407 Periplasmic binding protein domain VCSRO5_1551 PF00072 Response regulator receiver domain VCSRO5_1551 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_1552 PF00672 HAMP domain VCSRO5_1552 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1552 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1553 PF06629 MltA-interacting protein MipA VCSRO5_1554 PF04393 Protein of unknown function (DUF535) VCSRO5_1555 PF00072 Response regulator receiver domain VCSRO5_1555 PF02954 Bacterial regulatory protein, Fis family VCSRO5_1555 PF00158 Sigma-54 interaction domain VCSRO5_1556 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1556 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_1556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1557 PF00939 Sodium:sulfate symporter transmembrane region VCSRO5_1558 PF00672 HAMP domain VCSRO5_1558 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1559 PF00842 Alanine racemase, C-terminal domain VCSRO5_1559 PF01168 Alanine racemase, N-terminal domain VCSRO5_1560 PF00892 EamA-like transporter family VCSRO5_1562 PF13302 Acetyltransferase (GNAT) domain VCSRO5_1563 PF18024 Helix-turn-helix domain VCSRO5_1563 PF00158 Sigma-54 interaction domain VCSRO5_1564 PF05128 Domain of unknown function (DUF697) VCSRO5_1565 PF04317 YcjX-like family, DUF463 VCSRO5_1568 PF04715 Anthranilate synthase component I, N terminal region VCSRO5_1568 PF00425 chorismate binding enzyme VCSRO5_1569 PF00293 NUDIX domain VCSRO5_1570 PF03222 Tryptophan/tyrosine permease family VCSRO5_1571 PF03313 Serine dehydratase alpha chain VCSRO5_1571 PF03315 Serine dehydratase beta chain VCSRO5_1572 PF01242 6-pyruvoyl tetrahydropterin synthase VCSRO5_1573 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1573 PF00672 HAMP domain VCSRO5_1573 PF12729 Four helix bundle sensory module for signal transduction VCSRO5_1574 PF01336 OB-fold nucleic acid binding domain VCSRO5_1574 PF00152 tRNA synthetases class II (D, K and N) VCSRO5_1575 PF08543 Phosphomethylpyrimidine kinase VCSRO5_1576 PF00672 HAMP domain VCSRO5_1576 PF01966 HD domain VCSRO5_1577 PF00155 Aminotransferase class I and II VCSRO5_1580 PF17200 Single Cache domain 2 VCSRO5_1580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1580 PF00672 HAMP domain VCSRO5_1581 PF04349 Periplasmic glucan biosynthesis protein, MdoG VCSRO5_1582 PF13506 Glycosyl transferase family 21 VCSRO5_1583 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_1584 PF04794 YdjC-like protein VCSRO5_1585 PF02056 Family 4 glycosyl hydrolase VCSRO5_1585 PF11975 Family 4 glycosyl hydrolase C-terminal domain VCSRO5_1586 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VCSRO5_1587 PF02378 Phosphotransferase system, EIIC VCSRO5_1588 PF13006 Insertion element 4 transposase N-terminal VCSRO5_1588 PF01609 Transposase DDE domain VCSRO5_1589 PF02378 Phosphotransferase system, EIIC VCSRO5_1590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO5_1591 PF01522 Polysaccharide deacetylase VCSRO5_1592 PF02028 BCCT, betaine/carnitine/choline family transporter VCSRO5_1593 PF01047 MarR family VCSRO5_1594 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_1594 PF00072 Response regulator receiver domain VCSRO5_1595 PF17200 Single Cache domain 2 VCSRO5_1595 PF07730 Histidine kinase VCSRO5_1596 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCSRO5_1598 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO5_1601 PF00753 Metallo-beta-lactamase superfamily VCSRO5_1602 PF05951 Bacterial protein of unknown function (DUF882) VCSRO5_1608 PF00925 GTP cyclohydrolase II VCSRO5_1610 PF07690 Major Facilitator Superfamily VCSRO5_1612 PF00581 Rhodanese-like domain VCSRO5_1612 PF17773 UPF0176 acylphosphatase like domain VCSRO5_1613 PF03989 DNA gyrase C-terminal domain, beta-propeller VCSRO5_1613 PF00521 DNA gyrase/topoisomerase IV, subunit A VCSRO5_1615 PF03477 ATP cone domain VCSRO5_1615 PF00317 Ribonucleotide reductase, all-alpha domain VCSRO5_1615 PF02867 Ribonucleotide reductase, barrel domain VCSRO5_1616 PF00268 Ribonucleotide reductase, small chain VCSRO5_1617 PF00970 Oxidoreductase FAD-binding domain VCSRO5_1617 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO5_1617 PF00175 Oxidoreductase NAD-binding domain VCSRO5_1619 PF00994 Probable molybdopterin binding domain VCSRO5_1622 PF00672 HAMP domain VCSRO5_1622 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_1622 PF17200 Single Cache domain 2 VCSRO5_1625 PF00005 ABC transporter VCSRO5_1626 PF01032 FecCD transport family VCSRO5_1627 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VCSRO5_1629 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VCSRO5_1630 PF02654 Cobalamin-5-phosphate synthase VCSRO5_1631 PF02277 Phosphoribosyltransferase VCSRO5_1632 PF01641 SelR domain VCSRO5_1634 PF00375 Sodium:dicarboxylate symporter family VCSRO5_1635 PF08411 Exonuclease C-terminal VCSRO5_1635 PF00929 Exonuclease VCSRO5_1636 PF03788 LrgA family VCSRO5_1637 PF04172 LrgB-like family VCSRO5_1638 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO5_1638 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO5_1640 PF02222 ATP-grasp domain VCSRO5_1641 PF05724 Thiopurine S-methyltransferase (TPMT) VCSRO5_1644 PF00216 Bacterial DNA-binding protein VCSRO5_1645 PF03484 tRNA synthetase B5 domain VCSRO5_1645 PF03147 Ferredoxin-fold anticodon binding domain VCSRO5_1645 PF01588 Putative tRNA binding domain VCSRO5_1645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VCSRO5_1645 PF03483 B3/4 domain VCSRO5_1646 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VCSRO5_1646 PF01409 tRNA synthetases class II core domain (F) VCSRO5_1648 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1648 PF00072 Response regulator receiver domain VCSRO5_1653 PF01066 CDP-alcohol phosphatidyltransferase VCSRO5_1654 PF08459 UvrC Helix-hairpin-helix N-terminal VCSRO5_1654 PF02151 UvrB/uvrC motif VCSRO5_1654 PF01541 GIY-YIG catalytic domain VCSRO5_1655 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_1655 PF00072 Response regulator receiver domain VCSRO5_1656 PF00136 DNA polymerase family B VCSRO5_1656 PF03104 DNA polymerase family B, exonuclease domain VCSRO5_1657 PF13426 PAS domain VCSRO5_1657 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1657 PF00563 EAL domain VCSRO5_1659 PF01132 Elongation factor P (EF-P) OB domain VCSRO5_1659 PF08207 Elongation factor P (EF-P) KOW-like domain VCSRO5_1659 PF09285 Elongation factor P, C-terminal VCSRO5_1660 PF04269 Protein of unknown function, DUF440 VCSRO5_1662 PF07702 UTRA domain VCSRO5_1662 PF00392 Bacterial regulatory proteins, gntR family VCSRO5_1663 PF01979 Amidohydrolase family VCSRO5_1664 PF00491 Arginase family VCSRO5_1665 PF01175 Urocanase Rossmann-like domain VCSRO5_1665 PF17392 Urocanase C-terminal domain VCSRO5_1665 PF17391 Urocanase N-terminal domain VCSRO5_1666 PF00221 Aromatic amino acid lyase VCSRO5_1668 PF00089 Trypsin VCSRO5_1669 PF04191 Phospholipid methyltransferase VCSRO5_1670 PF02913 FAD linked oxidases, C-terminal domain VCSRO5_1670 PF01565 FAD binding domain VCSRO5_1670 PF13183 4Fe-4S dicluster domain VCSRO5_1673 PF13488 Glycine zipper VCSRO5_1673 PF00691 OmpA family VCSRO5_1677 PF01259 SAICAR synthetase VCSRO5_1679 PF03949 Malic enzyme, NAD binding domain VCSRO5_1679 PF00390 Malic enzyme, N-terminal domain VCSRO5_1681 PF02698 DUF218 domain VCSRO5_1682 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1682 PF00072 Response regulator receiver domain VCSRO5_1683 PF00266 Aminotransferase class-V VCSRO5_1685 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_1686 PF00664 ABC transporter transmembrane region VCSRO5_1686 PF00005 ABC transporter VCSRO5_1687 PF00664 ABC transporter transmembrane region VCSRO5_1687 PF00005 ABC transporter VCSRO5_1688 PF00849 RNA pseudouridylate synthase VCSRO5_1688 PF01479 S4 domain VCSRO5_1689 PF01300 Telomere recombination VCSRO5_1690 PF02811 PHP domain VCSRO5_1691 PF04715 Anthranilate synthase component I, N terminal region VCSRO5_1691 PF00425 chorismate binding enzyme VCSRO5_1692 PF00117 Glutamine amidotransferase class-I VCSRO5_1693 PF02885 Glycosyl transferase family, helical bundle domain VCSRO5_1693 PF00591 Glycosyl transferase family, a/b domain VCSRO5_1694 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VCSRO5_1694 PF00218 Indole-3-glycerol phosphate synthase VCSRO5_1695 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO5_1696 PF00290 Tryptophan synthase alpha chain VCSRO5_1697 PF00375 Sodium:dicarboxylate symporter family VCSRO5_1698 PF00265 Thymidine kinase VCSRO5_1699 PF00152 tRNA synthetases class II (D, K and N) VCSRO5_1699 PF02938 GAD domain VCSRO5_1699 PF01336 OB-fold nucleic acid binding domain VCSRO5_1700 PF01904 Protein of unknown function DUF72 VCSRO5_1701 PF13649 Methyltransferase domain VCSRO5_1702 PF08003 Protein of unknown function (DUF1698) VCSRO5_1703 PF08443 RimK-like ATP-grasp domain VCSRO5_1703 PF18030 RimK PreATP-grasp domain VCSRO5_1706 PF00266 Aminotransferase class-V VCSRO5_1708 PF00989 PAS fold VCSRO5_1708 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1711 PF04994 TfoX C-terminal domain VCSRO5_1711 PF04993 TfoX N-terminal domain VCSRO5_1713 PF03956 Lysine exporter LysO VCSRO5_1715 PF00282 Pyridoxal-dependent decarboxylase conserved domain VCSRO5_1716 PF01380 SIS domain VCSRO5_1716 PF01418 Helix-turn-helix domain, rpiR family VCSRO5_1717 PF00171 Aldehyde dehydrogenase family VCSRO5_1717 PF00465 Iron-containing alcohol dehydrogenase VCSRO5_1718 PF00462 Glutaredoxin VCSRO5_1719 PF06826 Predicted Permease Membrane Region VCSRO5_1719 PF02080 TrkA-C domain VCSRO5_1720 PF17871 AAA lid domain VCSRO5_1720 PF02861 Clp amino terminal domain, pathogenicity island component VCSRO5_1720 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO5_1720 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO5_1720 PF07724 AAA domain (Cdc48 subfamily) VCSRO5_1721 PF02617 ATP-dependent Clp protease adaptor protein ClpS VCSRO5_1722 PF00313 'Cold-shock' DNA-binding domain VCSRO5_1723 PF03971 Monomeric isocitrate dehydrogenase VCSRO5_1724 PF00849 RNA pseudouridylate synthase VCSRO5_1725 PF01502 Phosphoribosyl-AMP cyclohydrolase VCSRO5_1725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VCSRO5_1726 PF00977 Histidine biosynthesis protein VCSRO5_1727 PF00977 Histidine biosynthesis protein VCSRO5_1728 PF00117 Glutamine amidotransferase class-I VCSRO5_1729 PF00475 Imidazoleglycerol-phosphate dehydratase VCSRO5_1729 PF08645 Polynucleotide kinase 3 phosphatase VCSRO5_1730 PF00155 Aminotransferase class I and II VCSRO5_1731 PF00815 Histidinol dehydrogenase VCSRO5_1732 PF08029 HisG, C-terminal domain VCSRO5_1732 PF01634 ATP phosphoribosyltransferase VCSRO5_1733 PF03553 Na+/H+ antiporter family VCSRO5_1734 PF00816 H-NS histone family VCSRO5_1735 PF00294 pfkB family carbohydrate kinase VCSRO5_1737 PF04356 Protein of unknown function (DUF489) VCSRO5_1738 PF08328 Adenylosuccinate lyase C-terminal VCSRO5_1738 PF00206 Lyase VCSRO5_1740 PF16036 Chalcone isomerase-like VCSRO5_1745 PF00106 short chain dehydrogenase VCSRO5_1747 PF01435 Peptidase family M48 VCSRO5_1750 PF08241 Methyltransferase domain VCSRO5_1751 PF00155 Aminotransferase class I and II VCSRO5_1752 PF06968 Biotin and Thiamin Synthesis associated domain VCSRO5_1752 PF04055 Radical SAM superfamily VCSRO5_1753 PF00202 Aminotransferase class-III VCSRO5_1754 PF02403 Seryl-tRNA synthetase N-terminal domain VCSRO5_1754 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO5_1755 PF16193 AAA C-terminal domain VCSRO5_1755 PF12002 MgsA AAA+ ATPase C terminal VCSRO5_1755 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO5_1756 PF03548 Outer membrane lipoprotein carrier protein LolA VCSRO5_1757 PF02810 SEC-C motif VCSRO5_1757 PF07517 SecA DEAD-like domain VCSRO5_1757 PF01043 SecA preprotein cross-linking domain VCSRO5_1757 PF07516 SecA Wing and Scaffold domain VCSRO5_1758 PF01207 Dihydrouridine synthase (Dus) VCSRO5_1759 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1760 PF00005 ABC transporter VCSRO5_1761 PF02653 Branched-chain amino acid transport system / permease component VCSRO5_1763 PF09905 DNA-binding protein VF530 VCSRO5_1764 PF04217 Protein of unknown function, DUF412 VCSRO5_1765 PF00871 Acetokinase family VCSRO5_1766 PF07085 DRTGG domain VCSRO5_1766 PF01515 Phosphate acetyl/butaryl transferase VCSRO5_1767 PF13409 Glutathione S-transferase, N-terminal domain VCSRO5_1768 PF00005 ABC transporter VCSRO5_1768 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_1769 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_1769 PF00005 ABC transporter VCSRO5_1770 PF00005 ABC transporter VCSRO5_1770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_1771 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1771 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO5_1772 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1773 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO5_1775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1775 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1775 PF08448 PAS fold VCSRO5_1775 PF13188 PAS domain VCSRO5_1775 PF00072 Response regulator receiver domain VCSRO5_1776 PF00158 Sigma-54 interaction domain VCSRO5_1776 PF00072 Response regulator receiver domain VCSRO5_1776 PF02954 Bacterial regulatory protein, Fis family VCSRO5_1777 PF00563 EAL domain VCSRO5_1777 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1777 PF13188 PAS domain VCSRO5_1777 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_1778 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1778 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1779 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1779 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_1779 PF00989 PAS fold VCSRO5_1779 PF13188 PAS domain VCSRO5_1779 PF13426 PAS domain VCSRO5_1781 PF00072 Response regulator receiver domain VCSRO5_1784 PF03481 Putative GTP-binding controlling metal-binding VCSRO5_1784 PF01300 Telomere recombination VCSRO5_1787 PF01161 Phosphatidylethanolamine-binding protein VCSRO5_1789 PF00704 Glycosyl hydrolases family 18 VCSRO5_1789 PF06483 Chitinase C VCSRO5_1791 PF01116 Fructose-bisphosphate aldolase class-II VCSRO5_1792 PF01979 Amidohydrolase family VCSRO5_1793 PF03610 PTS system fructose IIA component VCSRO5_1794 PF03613 PTS system mannose/fructose/sorbose family IID component VCSRO5_1795 PF03609 PTS system sorbose-specific iic component VCSRO5_1796 PF03830 PTS system sorbose subfamily IIB component VCSRO5_1797 PF01380 SIS domain VCSRO5_1798 PF08013 Tagatose 6 phosphate kinase VCSRO5_1799 PF00455 DeoR C terminal sensor domain VCSRO5_1799 PF08220 DeoR-like helix-turn-helix domain VCSRO5_1800 PF00455 DeoR C terminal sensor domain VCSRO5_1800 PF08220 DeoR-like helix-turn-helix domain VCSRO5_1803 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO5_1803 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO5_1804 PF01022 Bacterial regulatory protein, arsR family VCSRO5_1805 PF08448 PAS fold VCSRO5_1805 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1807 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VCSRO5_1810 PF13404 AsnC-type helix-turn-helix domain VCSRO5_1810 PF01037 Lrp/AsnC ligand binding domain VCSRO5_1811 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO5_1812 PF01343 Peptidase family S49 VCSRO5_1812 PF08496 Peptidase family S49 N-terminal VCSRO5_1813 PF00106 short chain dehydrogenase VCSRO5_1815 PF03692 Putative zinc- or iron-chelating domain VCSRO5_1816 PF03692 Putative zinc- or iron-chelating domain VCSRO5_1817 PF13662 Toprim domain VCSRO5_1817 PF02132 RecR protein VCSRO5_1818 PF02575 YbaB/EbfC DNA-binding family VCSRO5_1819 PF12169 DNA polymerase III subunits gamma and tau domain III VCSRO5_1819 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VCSRO5_1819 PF12170 DNA polymerase III tau subunit V interacting with alpha VCSRO5_1820 PF00156 Phosphoribosyl transferase domain VCSRO5_1821 PF04304 Protein of unknown function (DUF454) VCSRO5_1823 PF00072 Response regulator receiver domain VCSRO5_1824 PF03466 LysR substrate binding domain VCSRO5_1824 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_1825 PF00881 Nitroreductase family VCSRO5_1826 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VCSRO5_1826 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VCSRO5_1826 PF00378 Enoyl-CoA hydratase/isomerase VCSRO5_1827 PF02803 Thiolase, C-terminal domain VCSRO5_1827 PF00108 Thiolase, N-terminal domain VCSRO5_1828 PF04542 Sigma-70 region 2 VCSRO5_1828 PF08281 Sigma-70, region 4 VCSRO5_1830 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO5_1831 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO5_1832 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO5_1833 PF01451 Low molecular weight phosphotyrosine protein phosphatase VCSRO5_1834 PF12557 Cob(I)alamin adenosyltransferase N terminal VCSRO5_1834 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VCSRO5_1835 PF05170 AsmA family VCSRO5_1836 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO5_1837 PF10609 NUBPL iron-transfer P-loop NTPase VCSRO5_1838 PF09334 tRNA synthetases class I (M) VCSRO5_1838 PF01588 Putative tRNA binding domain VCSRO5_1840 PF01048 Phosphorylase superfamily VCSRO5_1841 PF00403 Heavy-metal-associated domain VCSRO5_1842 PF00571 CBS domain VCSRO5_1842 PF01743 Poly A polymerase head domain VCSRO5_1843 PF07694 5TMR of 5TMR-LYT VCSRO5_1843 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1844 PF02391 MoaE protein VCSRO5_1845 PF02597 ThiS family VCSRO5_1846 PF01967 MoaC family VCSRO5_1847 PF00994 Probable molybdopterin binding domain VCSRO5_1848 PF04055 Radical SAM superfamily VCSRO5_1848 PF06463 Molybdenum Cofactor Synthesis C VCSRO5_1849 PF01933 Uncharacterised protein family UPF0052 VCSRO5_1850 PF01627 Hpt domain VCSRO5_1851 PF02954 Bacterial regulatory protein, Fis family VCSRO5_1851 PF00072 Response regulator receiver domain VCSRO5_1851 PF00158 Sigma-54 interaction domain VCSRO5_1852 PF00271 Helicase conserved C-terminal domain VCSRO5_1852 PF04851 Type III restriction enzyme, res subunit VCSRO5_1852 PF02151 UvrB/uvrC motif VCSRO5_1852 PF12344 Ultra-violet resistance protein B VCSRO5_1852 PF17757 UvrB interaction domain VCSRO5_1854 PF02508 Rnf-Nqr subunit, membrane protein VCSRO5_1855 PF04060 Putative Fe-S cluster VCSRO5_1856 PF10531 SLBB domain VCSRO5_1856 PF13375 RnfC Barrel sandwich hybrid domain VCSRO5_1856 PF12838 4Fe-4S dicluster domain VCSRO5_1856 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VCSRO5_1857 PF03116 NQR2, RnfD, RnfE family VCSRO5_1858 PF04205 FMN-binding domain VCSRO5_1859 PF02508 Rnf-Nqr subunit, membrane protein VCSRO5_1860 PF10576 Iron-sulfur binding domain of endonuclease III VCSRO5_1860 PF00633 Helix-hairpin-helix motif VCSRO5_1860 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO5_1861 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO5_1862 PF10952 Protein of unknown function (DUF2753) VCSRO5_1863 PF18393 MotY N-terminal domain VCSRO5_1863 PF00691 OmpA family VCSRO5_1864 PF00929 Exonuclease VCSRO5_1865 PF03553 Na+/H+ antiporter family VCSRO5_1865 PF13726 Na+-H+ antiporter family VCSRO5_1866 PF00156 Phosphoribosyl transferase domain VCSRO5_1867 PF02674 Colicin V production protein VCSRO5_1868 PF05036 Sporulation related domain VCSRO5_1869 PF02875 Mur ligase family, glutamate ligase domain VCSRO5_1869 PF08245 Mur ligase middle domain VCSRO5_1870 PF01039 Carboxyl transferase domain VCSRO5_1870 PF17848 Acetyl-coA carboxylase zinc finger domain VCSRO5_1871 PF01416 tRNA pseudouridine synthase VCSRO5_1873 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO5_1873 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VCSRO5_1874 PF02378 Phosphotransferase system, EIIC VCSRO5_1874 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCSRO5_1874 PF00367 phosphotransferase system, EIIB VCSRO5_1875 PF01979 Amidohydrolase family VCSRO5_1876 PF01047 MarR family VCSRO5_1876 PF00480 ROK family VCSRO5_1877 PF00999 Sodium/hydrogen exchanger family VCSRO5_1877 PF02254 TrkA-N domain VCSRO5_1878 PF13537 Glutamine amidotransferase domain VCSRO5_1878 PF00733 Asparagine synthase VCSRO5_1879 PF02357 Transcription termination factor nusG VCSRO5_1880 PF00854 POT family VCSRO5_1881 PF00762 Ferrochelatase VCSRO5_1882 PF05191 Adenylate kinase, active site lid VCSRO5_1883 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_1883 PF00183 Hsp90 protein VCSRO5_1884 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_1885 PF17323 Trans-membrane regulatory protein ToxS VCSRO5_1887 PF12850 Calcineurin-like phosphoesterase superfamily domain VCSRO5_1888 PF08338 Domain of unknown function (DUF1731) VCSRO5_1888 PF01370 NAD dependent epimerase/dehydratase family VCSRO5_1889 PF00106 short chain dehydrogenase VCSRO5_1890 PF00085 Thioredoxin VCSRO5_1891 PF01145 SPFH domain / Band 7 family VCSRO5_1891 PF16200 C-terminal region of band_7 VCSRO5_1892 PF01957 NfeD-like C-terminal, partner-binding VCSRO5_1893 PF13411 MerR HTH family regulatory protein VCSRO5_1894 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO5_1895 PF13609 Gram-negative porin VCSRO5_1896 PF01653 NAD-dependent DNA ligase adenylation domain VCSRO5_1896 PF03120 NAD-dependent DNA ligase OB-fold domain VCSRO5_1896 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VCSRO5_1896 PF12826 Helix-hairpin-helix motif VCSRO5_1896 PF00533 BRCA1 C Terminus (BRCT) domain VCSRO5_1897 PF04354 ZipA, C-terminal FtsZ-binding domain VCSRO5_1899 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO5_1900 PF00381 PTS HPr component phosphorylation site VCSRO5_1901 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO5_1901 PF05524 PEP-utilising enzyme, N-terminal VCSRO5_1901 PF00391 PEP-utilising enzyme, mobile domain VCSRO5_1902 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCSRO5_1903 PF01494 FAD binding domain VCSRO5_1904 PF04055 Radical SAM superfamily VCSRO5_1904 PF01938 TRAM domain VCSRO5_1904 PF00919 Uncharacterized protein family UPF0004 VCSRO5_1905 PF02562 PhoH-like protein VCSRO5_1906 PF02130 Uncharacterized protein family UPF0054 VCSRO5_1907 PF00571 CBS domain VCSRO5_1907 PF03471 Transporter associated domain VCSRO5_1908 PF00795 Carbon-nitrogen hydrolase VCSRO5_1909 PF07295 Zinc-ribbon containing domain VCSRO5_1910 PF08264 Anticodon-binding domain of tRNA VCSRO5_1910 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO5_1910 PF13603 Leucyl-tRNA synthetase, Domain 2 VCSRO5_1911 PF04390 Lipopolysaccharide-assembly VCSRO5_1912 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VCSRO5_1912 PF06144 DNA polymerase III, delta subunit VCSRO5_1914 PF02590 Predicted SPOUT methyltransferase VCSRO5_1915 PF00905 Penicillin binding protein transpeptidase domain VCSRO5_1915 PF03717 Penicillin-binding Protein dimerisation domain VCSRO5_1916 PF01098 Cell cycle protein VCSRO5_1917 PF03330 Lytic transglycolase VCSRO5_1917 PF05036 Sporulation related domain VCSRO5_1918 PF07943 Penicillin-binding protein 5, C-terminal domain VCSRO5_1918 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO5_1919 PF04359 Protein of unknown function (DUF493) VCSRO5_1920 PF03099 Biotin/lipoate A/B protein ligase family VCSRO5_1921 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VCSRO5_1921 PF04055 Radical SAM superfamily VCSRO5_1923 PF00464 Serine hydroxymethyltransferase VCSRO5_1927 PF02706 Chain length determinant protein VCSRO5_1927 PF13807 G-rich domain on putative tyrosine kinase VCSRO5_1927 PF13614 AAA domain VCSRO5_1928 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VCSRO5_1928 PF10531 SLBB domain VCSRO5_1928 PF02563 Polysaccharide biosynthesis/export protein VCSRO5_1930 PF02397 Bacterial sugar transferase VCSRO5_1933 PF12561 ToxR activated gene A lipoprotein domain VCSRO5_1933 PF17945 Beta/Gamma crystallin VCSRO5_1936 PF03808 Glycosyl transferase WecB/TagA/CpsF family VCSRO5_1938 PF00862 Sucrose synthase VCSRO5_1938 PF00534 Glycosyl transferases group 1 VCSRO5_1940 PF13439 Glycosyltransferase Family 4 VCSRO5_1940 PF00534 Glycosyl transferases group 1 VCSRO5_1944 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VCSRO5_1944 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VCSRO5_1944 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VCSRO5_1945 PF02350 UDP-N-acetylglucosamine 2-epimerase VCSRO5_1947 PF01451 Low molecular weight phosphotyrosine protein phosphatase VCSRO5_1948 PF00873 AcrB/AcrD/AcrF family VCSRO5_1949 PF13533 Biotin-lipoyl like VCSRO5_1954 PF00128 Alpha amylase, catalytic domain VCSRO5_1954 PF16657 Maltogenic Amylase, C-terminal domain VCSRO5_1955 PF00367 phosphotransferase system, EIIB VCSRO5_1955 PF02378 Phosphotransferase system, EIIC VCSRO5_1956 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_1958 PF00005 ABC transporter VCSRO5_1958 PF09383 NIL domain VCSRO5_1959 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_1960 PF03180 NLPA lipoprotein VCSRO5_1961 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VCSRO5_1962 PF07348 Syd protein (SUKH-2) VCSRO5_1963 PF14489 QueF-like protein VCSRO5_1963 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VCSRO5_1965 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_1966 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VCSRO5_1966 PF03641 Possible lysine decarboxylase VCSRO5_1966 PF11892 Domain of unknown function (DUF3412) VCSRO5_1967 PF01367 5'-3' exonuclease, C-terminal SAM fold VCSRO5_1967 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VCSRO5_1968 PF04241 Protein of unknown function (DUF423) VCSRO5_1969 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_1969 PF03466 LysR substrate binding domain VCSRO5_1970 PF02926 THUMP domain VCSRO5_1970 PF02568 Thiamine biosynthesis protein (ThiI) VCSRO5_1971 PF13677 Membrane MotB of proton-channel complex MotA/MotB VCSRO5_1971 PF00691 OmpA family VCSRO5_1972 PF01618 MotA/TolQ/ExbB proton channel family VCSRO5_1973 PF02609 Exonuclease VII small subunit VCSRO5_1974 PF00348 Polyprenyl synthetase VCSRO5_1975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VCSRO5_1975 PF02779 Transketolase, pyrimidine binding domain VCSRO5_1975 PF02780 Transketolase, C-terminal domain VCSRO5_1976 PF00849 RNA pseudouridylate synthase VCSRO5_1977 PF04287 tRNA pseudouridine synthase C VCSRO5_1980 PF13302 Acetyltransferase (GNAT) domain VCSRO5_1982 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VCSRO5_1983 PF03806 AbgT putative transporter family VCSRO5_1984 PF00444 Ribosomal protein L36 VCSRO5_1985 PF01197 Ribosomal protein L31 VCSRO5_1986 PF01980 tRNA-methyltransferase O VCSRO5_1986 PF18389 TrmO C-terminal domain VCSRO5_1987 PF03129 Anticodon binding domain VCSRO5_1987 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO5_1987 PF04073 Aminoacyl-tRNA editing domain VCSRO5_1989 PF06786 Uncharacterised protein family (UPF0253) VCSRO5_1991 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VCSRO5_1991 PF02769 AIR synthase related protein, C-terminal domain VCSRO5_1991 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VCSRO5_1992 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_1992 PF01464 Transglycosylase SLT domain VCSRO5_1994 PF14437 MafB19-like deaminase VCSRO5_1995 PF03806 AbgT putative transporter family VCSRO5_2000 PF00114 Pilin (bacterial filament) VCSRO5_2000 PF07963 Prokaryotic N-terminal methylation motif VCSRO5_2001 PF00684 DnaJ central domain VCSRO5_2001 PF01556 DnaJ C terminal domain VCSRO5_2001 PF00226 DnaJ domain VCSRO5_2002 PF00012 Hsp70 protein VCSRO5_2003 PF01025 GrpE VCSRO5_2004 PF01513 ATP-NAD kinase VCSRO5_2005 PF02463 RecF/RecN/SMC N terminal domain VCSRO5_2006 PF04355 SmpA / OmlA family VCSRO5_2007 PF03658 RnfH family Ubiquitin VCSRO5_2008 PF03364 Polyketide cyclase / dehydrase and lipid transport VCSRO5_2009 PF01668 SmpB protein VCSRO5_2011 PF13356 Arm DNA-binding domain VCSRO5_2011 PF00589 Phage integrase family VCSRO5_2022 PF04002 RadC-like JAB domain VCSRO5_2025 PF00075 RNase H VCSRO5_2031 PF13737 Transposase DDE domain VCSRO5_2034 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VCSRO5_2036 PF01381 Helix-turn-helix VCSRO5_2044 PF11953 Domain of unknown function (DUF3470) VCSRO5_2044 PF00037 4Fe-4S binding domain VCSRO5_2045 PF00588 SpoU rRNA Methylase family VCSRO5_2045 PF08032 RNA 2'-O ribose methyltransferase substrate binding VCSRO5_2047 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VCSRO5_2048 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VCSRO5_2049 PF04223 Citrate lyase, alpha subunit (CitF) VCSRO5_2050 PF03328 HpcH/HpaI aldolase/citrate lyase family VCSRO5_2051 PF06857 Malonate decarboxylase delta subunit (MdcD) VCSRO5_2052 PF08218 Citrate lyase ligase C-terminal domain VCSRO5_2053 PF03390 2-hydroxycarboxylate transporter family VCSRO5_2054 PF04277 Oxaloacetate decarboxylase, gamma chain VCSRO5_2055 PF00364 Biotin-requiring enzyme VCSRO5_2055 PF00682 HMGL-like VCSRO5_2055 PF02436 Conserved carboxylase domain VCSRO5_2056 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VCSRO5_2057 PF17203 Single cache domain 3 VCSRO5_2057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_2058 PF00072 Response regulator receiver domain VCSRO5_2058 PF12431 Transcriptional regulator VCSRO5_2062 PF01266 FAD dependent oxidoreductase VCSRO5_2063 PF01235 Sodium:alanine symporter family VCSRO5_2064 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VCSRO5_2064 PF01648 4'-phosphopantetheinyl transferase superfamily VCSRO5_2065 PF00005 ABC transporter VCSRO5_2066 PF01032 FecCD transport family VCSRO5_2067 PF01032 FecCD transport family VCSRO5_2068 PF01497 Periplasmic binding protein VCSRO5_2071 PF00425 chorismate binding enzyme VCSRO5_2072 PF00501 AMP-binding enzyme VCSRO5_2072 PF13193 AMP-binding enzyme C-terminal domain VCSRO5_2073 PF00857 Isochorismatase family VCSRO5_2073 PF00550 Phosphopantetheine attachment site VCSRO5_2074 PF01184 GPR1/FUN34/yaaH family VCSRO5_2075 PF06483 Chitinase C VCSRO5_2075 PF00704 Glycosyl hydrolases family 18 VCSRO5_2076 PF00117 Glutamine amidotransferase class-I VCSRO5_2076 PF00958 GMP synthase C terminal domain VCSRO5_2076 PF02540 NAD synthase VCSRO5_2077 PF00571 CBS domain VCSRO5_2077 PF00478 IMP dehydrogenase / GMP reductase domain VCSRO5_2078 PF02601 Exonuclease VII, large subunit VCSRO5_2078 PF13742 OB-fold nucleic acid binding domain VCSRO5_2081 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VCSRO5_2081 PF01926 50S ribosome-binding GTPase VCSRO5_2082 PF13360 PQQ-like domain VCSRO5_2083 PF09976 Tetratricopeptide repeat-like domain VCSRO5_2084 PF03129 Anticodon binding domain VCSRO5_2084 PF13393 Histidyl-tRNA synthetase VCSRO5_2085 PF04551 GcpE protein VCSRO5_2086 PF13464 Domain of unknown function (DUF4115) VCSRO5_2087 PF04055 Radical SAM superfamily VCSRO5_2088 PF00334 Nucleoside diphosphate kinase VCSRO5_2089 PF12404 Peptidase VCSRO5_2089 PF00883 Cytosol aminopeptidase family, catalytic domain VCSRO5_2090 PF04384 Iron-sulphur cluster assembly VCSRO5_2091 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO5_2092 PF00012 Hsp70 protein VCSRO5_2093 PF00226 DnaJ domain VCSRO5_2093 PF07743 HSCB C-terminal oligomerisation domain VCSRO5_2094 PF01521 Iron-sulphur cluster biosynthesis VCSRO5_2095 PF01592 NifU-like N terminal domain VCSRO5_2096 PF00266 Aminotransferase class-V VCSRO5_2097 PF02082 Transcriptional regulator VCSRO5_2098 PF00588 SpoU rRNA Methylase family VCSRO5_2099 PF00459 Inositol monophosphatase family VCSRO5_2100 PF02355 Protein export membrane protein VCSRO5_2100 PF07549 SecD/SecF GG Motif VCSRO5_2101 PF07549 SecD/SecF GG Motif VCSRO5_2101 PF13721 SecD export protein N-terminal TM region VCSRO5_2101 PF02355 Protein export membrane protein VCSRO5_2102 PF02699 Preprotein translocase subunit VCSRO5_2103 PF01702 Queuine tRNA-ribosyltransferase VCSRO5_2104 PF02547 Queuosine biosynthesis protein VCSRO5_2105 PF00571 CBS domain VCSRO5_2106 PF00463 Isocitrate lyase family VCSRO5_2107 PF01274 Malate synthase VCSRO5_2108 PF03466 LysR substrate binding domain VCSRO5_2108 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_2109 PF10417 C-terminal domain of 1-Cys peroxiredoxin VCSRO5_2109 PF00578 AhpC/TSA family VCSRO5_2110 PF03932 CutC family VCSRO5_2111 PF03976 Polyphosphate kinase 2 (PPK2) VCSRO5_2112 PF01895 PhoU domain VCSRO5_2113 PF00005 ABC transporter VCSRO5_2114 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2115 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2116 PF17941 Polyphosphate kinase C-terminal domain 1 VCSRO5_2116 PF13089 Polyphosphate kinase N-terminal domain VCSRO5_2116 PF02503 Polyphosphate kinase middle domain VCSRO5_2116 PF13090 Polyphosphate kinase C-terminal domain 2 VCSRO5_2117 PF02541 Ppx/GppA phosphatase family VCSRO5_2118 PF12849 PBP superfamily domain VCSRO5_2119 PF00989 PAS fold VCSRO5_2119 PF11808 Phosphate regulon sensor protein PhoR VCSRO5_2119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_2119 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_2120 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_2120 PF00072 Response regulator receiver domain VCSRO5_2121 PF04381 Putative exonuclease, RdgC VCSRO5_2122 PF01136 Peptidase family U32 VCSRO5_2122 PF16325 Peptidase family U32 C-terminal domain VCSRO5_2123 PF00037 4Fe-4S binding domain VCSRO5_2124 PF00881 Nitroreductase family VCSRO5_2132 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO5_2132 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO5_2132 PF02861 Clp amino terminal domain, pathogenicity island component VCSRO5_2132 PF07724 AAA domain (Cdc48 subfamily) VCSRO5_2132 PF17871 AAA lid domain VCSRO5_2133 PF02578 Multi-copper polyphenol oxidoreductase laccase VCSRO5_2134 PF01479 S4 domain VCSRO5_2134 PF00849 RNA pseudouridylate synthase VCSRO5_2135 PF13525 Outer membrane lipoprotein VCSRO5_2136 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VCSRO5_2137 PF01817 Chorismate mutase type II VCSRO5_2137 PF00800 Prephenate dehydratase VCSRO5_2138 PF13416 Bacterial extracellular solute-binding protein VCSRO5_2139 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2139 PF00563 EAL domain VCSRO5_2140 PF01931 Protein of unknown function DUF84 VCSRO5_2141 PF01371 Trp repressor protein VCSRO5_2142 PF14718 Soluble lytic murein transglycosylase L domain VCSRO5_2142 PF01464 Transglycosylase SLT domain VCSRO5_2143 PF00005 ABC transporter VCSRO5_2143 PF12848 ABC transporter VCSRO5_2144 PF07238 PilZ domain VCSRO5_2145 PF02153 Prephenate dehydrogenase VCSRO5_2145 PF01817 Chorismate mutase type II VCSRO5_2146 PF00793 DAHP synthetase I family VCSRO5_2147 PF06580 Histidine kinase VCSRO5_2147 PF07694 5TMR of 5TMR-LYT VCSRO5_2148 PF00072 Response regulator receiver domain VCSRO5_2148 PF04397 LytTr DNA-binding domain VCSRO5_2149 PF00933 Glycosyl hydrolase family 3 N terminal domain VCSRO5_2150 PF03702 Anhydro-N-acetylmuramic acid kinase VCSRO5_2151 PF13580 SIS domain VCSRO5_2154 PF02554 Carbon starvation protein CstA VCSRO5_2155 PF02401 LytB protein VCSRO5_2156 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO5_2157 PF01252 Signal peptidase (SPase) II VCSRO5_2158 PF08264 Anticodon-binding domain of tRNA VCSRO5_2158 PF06827 Zinc finger found in FPG and IleRS VCSRO5_2158 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO5_2159 PF01687 Riboflavin kinase VCSRO5_2159 PF06574 FAD synthetase VCSRO5_2160 PF03023 Lipid II flippase MurJ VCSRO5_2161 PF01649 Ribosomal protein S20 VCSRO5_2162 PF01022 Bacterial regulatory protein, arsR family VCSRO5_2163 PF03466 LysR substrate binding domain VCSRO5_2163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_2164 PF02690 Na+/Pi-cotransporter VCSRO5_2165 PF00303 Thymidylate synthase VCSRO5_2166 PF01790 Prolipoprotein diacylglyceryl transferase VCSRO5_2167 PF01925 Sulfite exporter TauE/SafE VCSRO5_2168 PF01590 GAF domain VCSRO5_2168 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO5_2168 PF05524 PEP-utilising enzyme, N-terminal VCSRO5_2168 PF00391 PEP-utilising enzyme, mobile domain VCSRO5_2169 PF00391 PEP-utilising enzyme, mobile domain VCSRO5_2169 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO5_2169 PF01590 GAF domain VCSRO5_2169 PF05524 PEP-utilising enzyme, N-terminal VCSRO5_2170 PF00293 NUDIX domain VCSRO5_2171 PF02976 DNA mismatch repair enzyme MutH VCSRO5_2172 PF00248 Aldo/keto reductase family VCSRO5_2175 PF00072 Response regulator receiver domain VCSRO5_2175 PF02954 Bacterial regulatory protein, Fis family VCSRO5_2175 PF00158 Sigma-54 interaction domain VCSRO5_2176 PF00152 tRNA synthetases class II (D, K and N) VCSRO5_2176 PF01336 OB-fold nucleic acid binding domain VCSRO5_2177 PF03462 PCRF domain VCSRO5_2177 PF00472 RF-1 domain VCSRO5_2178 PF05525 Branched-chain amino acid transport protein VCSRO5_2179 PF05175 Methyltransferase small domain VCSRO5_2180 PF00271 Helicase conserved C-terminal domain VCSRO5_2180 PF00270 DEAD/DEAH box helicase VCSRO5_2181 PF00009 Elongation factor Tu GTP binding domain VCSRO5_2181 PF03144 Elongation factor Tu domain 2 VCSRO5_2181 PF16658 Class II release factor RF3, C-terminal domain VCSRO5_2182 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_2182 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2182 PF00563 EAL domain VCSRO5_2185 PF13508 Acetyltransferase (GNAT) domain VCSRO5_2186 PF02036 SCP-2 sterol transfer family VCSRO5_2187 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_2187 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2187 PF00563 EAL domain VCSRO5_2188 PF01136 Peptidase family U32 VCSRO5_2189 PF01136 Peptidase family U32 VCSRO5_2192 PF07719 Tetratricopeptide repeat VCSRO5_2192 PF13181 Tetratricopeptide repeat VCSRO5_2193 PF00575 S1 RNA binding domain VCSRO5_2193 PF03725 3' exoribonuclease family, domain 2 VCSRO5_2193 PF01138 3' exoribonuclease family, domain 1 VCSRO5_2193 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VCSRO5_2193 PF00013 KH domain VCSRO5_2194 PF00312 Ribosomal protein S15 VCSRO5_2195 PF09157 Pseudouridine synthase II TruB, C-terminal VCSRO5_2195 PF01509 TruB family pseudouridylate synthase (N terminal domain) VCSRO5_2195 PF16198 tRNA pseudouridylate synthase B C-terminal domain VCSRO5_2196 PF02033 Ribosome-binding factor A VCSRO5_2197 PF04760 Translation initiation factor IF-2, N-terminal region VCSRO5_2197 PF00009 Elongation factor Tu GTP binding domain VCSRO5_2197 PF11987 Translation-initiation factor 2 VCSRO5_2197 PF08364 Bacterial translation initiation factor IF-2 associated region VCSRO5_2198 PF00575 S1 RNA binding domain VCSRO5_2198 PF13184 NusA-like KH domain VCSRO5_2198 PF08529 NusA N-terminal domain VCSRO5_2199 PF02576 RimP N-terminal domain VCSRO5_2199 PF17384 RimP C-terminal SH3 domain VCSRO5_2202 PF03840 Preprotein translocase SecG subunit VCSRO5_2204 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO5_2204 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO5_2204 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO5_2204 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO5_2205 PF00809 Pterin binding enzyme VCSRO5_2206 PF06480 FtsH Extracellular VCSRO5_2206 PF01434 Peptidase family M41 VCSRO5_2206 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO5_2206 PF17862 AAA+ lid domain VCSRO5_2207 PF01728 FtsJ-like methyltransferase VCSRO5_2208 PF01985 CRS1 / YhbY (CRM) domain VCSRO5_2209 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO5_2209 PF03449 Transcription elongation factor, N-terminal VCSRO5_2210 PF13609 Gram-negative porin VCSRO5_2211 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VCSRO5_2212 PF00579 tRNA synthetases class I (W and Y) VCSRO5_2212 PF01479 S4 domain VCSRO5_2213 PF04225 Opacity-associated protein A LysM-like domain VCSRO5_2213 PF01551 Peptidase family M23 VCSRO5_2214 PF00873 AcrB/AcrD/AcrF family VCSRO5_2216 PF01521 Iron-sulphur cluster biosynthesis VCSRO5_2217 PF00202 Aminotransferase class-III VCSRO5_2219 PF01594 AI-2E family transporter VCSRO5_2220 PF05175 Methyltransferase small domain VCSRO5_2220 PF08468 Methyltransferase small domain N-terminal VCSRO5_2221 PF00072 Response regulator receiver domain VCSRO5_2221 PF09308 LuxQ, periplasmic VCSRO5_2221 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_2221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_2222 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO5_2223 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2224 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2224 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO5_2225 PF00005 ABC transporter VCSRO5_2225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_2226 PF00005 ABC transporter VCSRO5_2226 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_2228 PF01869 BadF/BadG/BcrA/BcrD ATPase family VCSRO5_2229 PF00728 Glycosyl hydrolase family 20, catalytic domain VCSRO5_2229 PF02838 Glycosyl hydrolase family 20, domain 2 VCSRO5_2230 PF06165 Glycosyltransferase family 36 VCSRO5_2230 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VCSRO5_2231 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO5_2231 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO5_2231 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO5_2231 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO5_2232 PF00005 ABC transporter VCSRO5_2232 PF08402 TOBE domain VCSRO5_2234 PF13416 Bacterial extracellular solute-binding protein VCSRO5_2235 PF00909 Ammonium Transporter Family VCSRO5_2236 PF00543 Nitrogen regulatory protein P-II VCSRO5_2237 PF06062 Uncharacterised protein family (UPF0231) VCSRO5_2238 PF11791 Aconitate B N-terminal domain VCSRO5_2238 PF06434 Aconitate hydratase 2 N-terminus VCSRO5_2238 PF00330 Aconitase family (aconitate hydratase) VCSRO5_2239 PF01734 Patatin-like phospholipase VCSRO5_2241 PF00912 Transglycosylase VCSRO5_2241 PF00905 Penicillin binding protein transpeptidase domain VCSRO5_2241 PF14814 Bifunctional transglycosylase second domain VCSRO5_2242 PF00270 DEAD/DEAH box helicase VCSRO5_2242 PF04408 Helicase associated domain (HA2) VCSRO5_2242 PF00271 Helicase conserved C-terminal domain VCSRO5_2242 PF08482 ATP-dependent helicase C-terminal VCSRO5_2244 PF17746 SfsA N-terminal OB domain VCSRO5_2244 PF03749 Sugar fermentation stimulation protein RE domain VCSRO5_2245 PF01258 Prokaryotic dksA/traR C4-type zinc finger VCSRO5_2246 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO5_2247 PF12626 Polymerase A arginine-rich C-terminus VCSRO5_2247 PF01743 Poly A polymerase head domain VCSRO5_2247 PF12627 Probable RNA and SrmB- binding site of polymerase A VCSRO5_2248 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VCSRO5_2249 PF02548 Ketopantoate hydroxymethyltransferase VCSRO5_2250 PF02569 Pantoate-beta-alanine ligase VCSRO5_2251 PF01061 ABC-2 type transporter VCSRO5_2252 PF00005 ABC transporter VCSRO5_2253 PF01740 STAS domain VCSRO5_2253 PF00916 Sulfate permease family VCSRO5_2254 PF00484 Carbonic anhydrase VCSRO5_2255 PF00156 Phosphoribosyl transferase domain VCSRO5_2256 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_2257 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_2258 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO5_2259 PF04348 LppC putative lipoprotein VCSRO5_2260 PF02021 Uncharacterised protein family UPF0102 VCSRO5_2261 PF13580 SIS domain VCSRO5_2262 PF04972 BON domain VCSRO5_2263 PF04386 Stringent starvation protein B VCSRO5_2264 PF00043 Glutathione S-transferase, C-terminal domain VCSRO5_2264 PF02798 Glutathione S-transferase, N-terminal domain VCSRO5_2265 PF02167 Cytochrome C1 family VCSRO5_2266 PF00033 Cytochrome b/b6/petB VCSRO5_2266 PF00032 Cytochrome b(C-terminal)/b6/petD VCSRO5_2267 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VCSRO5_2267 PF00355 Rieske [2Fe-2S] domain VCSRO5_2268 PF00380 Ribosomal protein S9/S16 VCSRO5_2269 PF00572 Ribosomal protein L13 VCSRO5_2270 PF03969 AFG1-like ATPase VCSRO5_2272 PF00595 PDZ domain VCSRO5_2273 PF13180 PDZ domain VCSRO5_2274 PF01245 Ribosomal protein L19 VCSRO5_2275 PF01746 tRNA (Guanine-1)-methyltransferase VCSRO5_2276 PF05239 PRC-barrel domain VCSRO5_2276 PF01782 RimM N-terminal domain VCSRO5_2277 PF00886 Ribosomal protein S16 VCSRO5_2278 PF02978 Signal peptide binding domain VCSRO5_2278 PF02881 SRP54-type protein, helical bundle domain VCSRO5_2278 PF00448 SRP54-type protein, GTPase domain VCSRO5_2280 PF01578 Cytochrome C assembly protein VCSRO5_2281 PF03471 Transporter associated domain VCSRO5_2281 PF00571 CBS domain VCSRO5_2281 PF01595 Cyclin M transmembrane N-terminal domain VCSRO5_2282 PF02664 S-Ribosylhomocysteinase (LuxS) VCSRO5_2283 PF04262 Glutamate-cysteine ligase VCSRO5_2284 PF05193 Peptidase M16 inactive domain VCSRO5_2284 PF00675 Insulinase (Peptidase family M16) VCSRO5_2285 PF09335 SNARE associated Golgi protein VCSRO5_2286 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO5_2286 PF00107 Zinc-binding dehydrogenase VCSRO5_2287 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VCSRO5_2288 PF00364 Biotin-requiring enzyme VCSRO5_2288 PF00682 HMGL-like VCSRO5_2288 PF02436 Conserved carboxylase domain VCSRO5_2289 PF04277 Oxaloacetate decarboxylase, gamma chain VCSRO5_2298 PF02599 Global regulator protein family VCSRO5_2299 PF00696 Amino acid kinase family VCSRO5_2299 PF01842 ACT domain VCSRO5_2299 PF13840 ACT domain VCSRO5_2300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VCSRO5_2300 PF02272 DHHA1 domain VCSRO5_2300 PF01411 tRNA synthetases class II (A) VCSRO5_2301 PF02631 RecX family VCSRO5_2302 PF00154 recA bacterial DNA recombination protein VCSRO5_2303 PF02464 Competence-damaged protein VCSRO5_2304 PF00005 ABC transporter VCSRO5_2304 PF12857 TOBE-like domain VCSRO5_2305 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2306 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2308 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO5_2309 PF01624 MutS domain I VCSRO5_2309 PF05188 MutS domain II VCSRO5_2309 PF05192 MutS domain III VCSRO5_2309 PF05190 MutS family domain IV VCSRO5_2309 PF00488 MutS domain V VCSRO5_2310 PF04542 Sigma-70 region 2 VCSRO5_2310 PF00140 Sigma-70 factor, region 1.2 VCSRO5_2310 PF04545 Sigma-70, region 4 VCSRO5_2310 PF04539 Sigma-70 region 3 VCSRO5_2311 PF01551 Peptidase family M23 VCSRO5_2311 PF01476 LysM domain VCSRO5_2313 PF01975 Survival protein SurE VCSRO5_2314 PF01142 tRNA pseudouridine synthase D (TruD) VCSRO5_2315 PF02542 YgbB family VCSRO5_2316 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VCSRO5_2317 PF04977 Septum formation initiator VCSRO5_2318 PF02673 Bacitracin resistance protein BacA VCSRO5_2319 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VCSRO5_2320 PF02152 Dihydroneopterin aldolase VCSRO5_2321 PF02660 Glycerol-3-phosphate acyltransferase VCSRO5_2322 PF00561 alpha/beta hydrolase fold VCSRO5_2323 PF00814 Glycoprotease family VCSRO5_2324 PF01165 Ribosomal protein S21 VCSRO5_2325 PF09424 Yqey-like protein VCSRO5_2326 PF10410 DnaB-helicase binding domain of primase VCSRO5_2326 PF08278 DNA primase DnaG DnaB-binding VCSRO5_2326 PF08275 DNA primase catalytic core, N-terminal domain VCSRO5_2326 PF01807 CHC2 zinc finger VCSRO5_2327 PF04542 Sigma-70 region 2 VCSRO5_2327 PF04546 Sigma-70, non-essential region VCSRO5_2327 PF03979 Sigma-70 factor, region 1.1 VCSRO5_2327 PF00140 Sigma-70 factor, region 1.2 VCSRO5_2327 PF04539 Sigma-70 region 3 VCSRO5_2327 PF04545 Sigma-70, region 4 VCSRO5_2329 PF00589 Phage integrase family VCSRO5_2332 PF06508 Queuosine biosynthesis protein QueC VCSRO5_2337 PF03432 Relaxase/Mobilisation nuclease domain VCSRO5_2337 PF18821 Large polyvalent protein-associated domain 7 VCSRO5_2348 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO5_2349 PF01380 SIS domain VCSRO5_2350 PF08220 DeoR-like helix-turn-helix domain VCSRO5_2350 PF00455 DeoR C terminal sensor domain VCSRO5_2351 PF00224 Pyruvate kinase, barrel domain VCSRO5_2351 PF02887 Pyruvate kinase, alpha/beta domain VCSRO5_2353 PF04402 Protein of unknown function (DUF541) VCSRO5_2354 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_2354 PF03466 LysR substrate binding domain VCSRO5_2355 PF01810 LysE type translocator VCSRO5_2356 PF00924 Mechanosensitive ion channel VCSRO5_2356 PF05552 Conserved TM helix VCSRO5_2357 PF01116 Fructose-bisphosphate aldolase class-II VCSRO5_2358 PF00162 Phosphoglycerate kinase VCSRO5_2359 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO5_2359 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO5_2360 PF07715 TonB-dependent Receptor Plug Domain VCSRO5_2360 PF00593 TonB dependent receptor VCSRO5_2361 PF03466 LysR substrate binding domain VCSRO5_2361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_2362 PF02780 Transketolase, C-terminal domain VCSRO5_2362 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO5_2362 PF02779 Transketolase, pyrimidine binding domain VCSRO5_2363 PF02772 S-adenosylmethionine synthetase, central domain VCSRO5_2363 PF00438 S-adenosylmethionine synthetase, N-terminal domain VCSRO5_2363 PF02773 S-adenosylmethionine synthetase, C-terminal domain VCSRO5_2364 PF10263 SprT-like family VCSRO5_2364 PF17283 SprT-like zinc ribbon domain VCSRO5_2365 PF04231 Endonuclease I VCSRO5_2366 PF04452 RNA methyltransferase VCSRO5_2367 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VCSRO5_2367 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VCSRO5_2368 PF02622 Uncharacterized ACR, COG1678 VCSRO5_2369 PF03652 Holliday junction resolvase VCSRO5_2370 PF01479 S4 domain VCSRO5_2370 PF00579 tRNA synthetases class I (W and Y) VCSRO5_2372 PF00437 Type II/IV secretion system protein VCSRO5_2373 PF00437 Type II/IV secretion system protein VCSRO5_2374 PF01168 Alanine racemase, N-terminal domain VCSRO5_2375 PF03807 NADP oxidoreductase coenzyme F420-dependent VCSRO5_2375 PF14748 Pyrroline-5-carboxylate reductase dimerisation VCSRO5_2376 PF02325 YGGT family VCSRO5_2377 PF02594 Uncharacterised ACR, YggU family COG1872 VCSRO5_2379 PF01725 Ham1 family VCSRO5_2380 PF04055 Radical SAM superfamily VCSRO5_2380 PF06969 HemN C-terminal domain VCSRO5_2381 PF04960 Glutaminase VCSRO5_2382 PF02390 Putative methyltransferase VCSRO5_2383 PF10576 Iron-sulfur binding domain of endonuclease III VCSRO5_2383 PF00633 Helix-hairpin-helix motif VCSRO5_2383 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO5_2383 PF14815 NUDIX domain VCSRO5_2384 PF04362 Bacterial Fe(2+) trafficking VCSRO5_2385 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VCSRO5_2385 PF01464 Transglycosylase SLT domain VCSRO5_2390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_2390 PF00672 HAMP domain VCSRO5_2390 PF17200 Single Cache domain 2 VCSRO5_2396 PF05099 Tellurite resistance protein TerB VCSRO5_2396 PF00226 DnaJ domain VCSRO5_2397 PF03968 OstA-like protein VCSRO5_2397 PF04453 LPS transport system D VCSRO5_2398 PF09312 SurA N-terminal domain VCSRO5_2399 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VCSRO5_2400 PF00398 Ribosomal RNA adenine dimethylase VCSRO5_2401 PF04379 ApaG domain VCSRO5_2402 PF00149 Calcineurin-like phosphoesterase VCSRO5_2403 PF00186 Dihydrofolate reductase VCSRO5_2404 PF12821 Threonine/Serine exporter, ThrE VCSRO5_2405 PF06738 Putative threonine/serine exporter VCSRO5_2406 PF01926 50S ribosome-binding GTPase VCSRO5_2406 PF01018 GTP1/OBG VCSRO5_2407 PF01016 Ribosomal L27 protein VCSRO5_2408 PF00829 Ribosomal prokaryotic L21 protein VCSRO5_2409 PF00348 Polyprenyl synthetase VCSRO5_2410 PF13520 Amino acid permease VCSRO5_2411 PF00056 lactate/malate dehydrogenase, NAD binding domain VCSRO5_2411 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VCSRO5_2412 PF01316 Arginine repressor, DNA binding domain VCSRO5_2412 PF02863 Arginine repressor, C-terminal domain VCSRO5_2413 PF16868 NMT1-like family VCSRO5_2415 PF00582 Universal stress protein family VCSRO5_2418 PF06877 Regulator of ribonuclease activity B VCSRO5_2420 PF01523 Putative modulator of DNA gyrase VCSRO5_2421 PF00795 Carbon-nitrogen hydrolase VCSRO5_2422 PF13116 Protein of unknown function VCSRO5_2422 PF13502 AsmA-like C-terminal region VCSRO5_2423 PF10150 Ribonuclease E/G family VCSRO5_2423 PF00575 S1 RNA binding domain VCSRO5_2424 PF02545 Maf-like protein VCSRO5_2425 PF04093 rod shape-determining protein MreD VCSRO5_2426 PF04085 rod shape-determining protein MreC VCSRO5_2433 PF07963 Prokaryotic N-terminal methylation motif VCSRO5_2434 PF07963 Prokaryotic N-terminal methylation motif VCSRO5_2436 PF00482 Type II secretion system (T2SS), protein F VCSRO5_2437 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VCSRO5_2437 PF00437 Type II/IV secretion system protein VCSRO5_2439 PF13401 AAA domain VCSRO5_2439 PF01471 Putative peptidoglycan binding domain VCSRO5_2440 PF03958 Bacterial type II/III secretion system short domain VCSRO5_2440 PF07660 Secretin and TonB N terminus short domain VCSRO5_2440 PF11741 AMIN domain VCSRO5_2440 PF00263 Bacterial type II and III secretion system protein VCSRO5_2445 PF00563 EAL domain VCSRO5_2445 PF17157 Gammaproteobacterial periplasmic sensor domain VCSRO5_2445 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2446 PF00436 Single-strand binding protein family VCSRO5_2447 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_2448 PF00483 Nucleotidyl transferase VCSRO5_2449 PF00005 ABC transporter VCSRO5_2449 PF17755 UvrA DNA-binding domain VCSRO5_2449 PF17760 UvrA interaction domain VCSRO5_2451 PF00266 Aminotransferase class-V VCSRO5_2452 PF00696 Amino acid kinase family VCSRO5_2452 PF01842 ACT domain VCSRO5_2453 PF02310 B12 binding domain VCSRO5_2453 PF02607 B12 binding domain VCSRO5_2453 PF02965 Vitamin B12 dependent methionine synthase, activation domain VCSRO5_2453 PF00809 Pterin binding enzyme VCSRO5_2453 PF02574 Homocysteine S-methyltransferase VCSRO5_2454 PF00999 Sodium/hydrogen exchanger family VCSRO5_2460 PF01507 Phosphoadenosine phosphosulfate reductase family VCSRO5_2461 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VCSRO5_2461 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VCSRO5_2462 PF00667 FAD binding domain VCSRO5_2462 PF00258 Flavodoxin VCSRO5_2462 PF00175 Oxidoreductase NAD-binding domain VCSRO5_2465 PF09583 Phage shock protein G (Phageshock_PspG) VCSRO5_2466 PF01207 Dihydrouridine synthase (Dus) VCSRO5_2467 PF01475 Ferric uptake regulator family VCSRO5_2469 PF12706 Beta-lactamase superfamily domain VCSRO5_2470 PF00342 Phosphoglucose isomerase VCSRO5_2471 PF01894 Uncharacterised protein family UPF0047 VCSRO5_2472 PF00842 Alanine racemase, C-terminal domain VCSRO5_2472 PF01168 Alanine racemase, N-terminal domain VCSRO5_2473 PF03796 DnaB-like helicase C terminal domain VCSRO5_2473 PF00772 DnaB-like helicase N terminal domain VCSRO5_2475 PF03948 Ribosomal protein L9, C-terminal domain VCSRO5_2475 PF01281 Ribosomal protein L9, N-terminal domain VCSRO5_2476 PF01084 Ribosomal protein S18 VCSRO5_2477 PF00436 Single-strand binding protein family VCSRO5_2478 PF01250 Ribosomal protein S6 VCSRO5_2479 PF00210 Ferritin-like domain VCSRO5_2480 PF04324 BFD-like [2Fe-2S] binding domain VCSRO5_2481 PF00009 Elongation factor Tu GTP binding domain VCSRO5_2481 PF03143 Elongation factor Tu C-terminal domain VCSRO5_2481 PF03144 Elongation factor Tu domain 2 VCSRO5_2482 PF00679 Elongation factor G C-terminus VCSRO5_2482 PF14492 Elongation Factor G, domain II VCSRO5_2482 PF03764 Elongation factor G, domain IV VCSRO5_2482 PF00009 Elongation factor Tu GTP binding domain VCSRO5_2482 PF03144 Elongation factor Tu domain 2 VCSRO5_2483 PF00177 Ribosomal protein S7p/S5e VCSRO5_2484 PF00164 Ribosomal protein S12/S23 VCSRO5_2486 PF02635 DsrE/DsrF-like family VCSRO5_2487 PF02635 DsrE/DsrF-like family VCSRO5_2488 PF13309 HTH domain VCSRO5_2488 PF08348 YheO-like PAS domain VCSRO5_2489 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO5_2489 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO5_2491 PF04102 SlyX VCSRO5_2492 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VCSRO5_2493 PF01145 SPFH domain / Band 7 family VCSRO5_2494 PF01145 SPFH domain / Band 7 family VCSRO5_2494 PF12221 Bacterial membrane protein N terminal VCSRO5_2495 PF01926 50S ribosome-binding GTPase VCSRO5_2495 PF13167 GTP-binding GTPase N-terminal VCSRO5_2495 PF16360 GTP-binding GTPase Middle Region VCSRO5_2496 PF17209 Hfq protein VCSRO5_2498 PF01119 DNA mismatch repair protein, C-terminal domain VCSRO5_2498 PF08676 MutL C terminal dimerisation domain VCSRO5_2499 PF01520 N-acetylmuramoyl-L-alanine amidase VCSRO5_2500 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VCSRO5_2501 PF08331 Domain of unknown function (DUF1730) VCSRO5_2511 PF00929 Exonuclease VCSRO5_2512 PF03193 RsgA GTPase VCSRO5_2513 PF02666 Phosphatidylserine decarboxylase VCSRO5_2514 PF00939 Sodium:sulfate symporter transmembrane region VCSRO5_2516 PF01676 Metalloenzyme superfamily VCSRO5_2516 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VCSRO5_2517 PF01551 Peptidase family M23 VCSRO5_2519 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_2519 PF08360 QacR-like protein, C-terminal region VCSRO5_2520 PF01208 Uroporphyrinogen decarboxylase (URO-D) VCSRO5_2521 PF00293 NUDIX domain VCSRO5_2521 PF09297 NADH pyrophosphatase zinc ribbon domain VCSRO5_2522 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VCSRO5_2523 PF01797 Transposase IS200 like VCSRO5_2524 PF04998 RNA polymerase Rpb1, domain 5 VCSRO5_2524 PF05000 RNA polymerase Rpb1, domain 4 VCSRO5_2524 PF04997 RNA polymerase Rpb1, domain 1 VCSRO5_2524 PF00623 RNA polymerase Rpb1, domain 2 VCSRO5_2524 PF04983 RNA polymerase Rpb1, domain 3 VCSRO5_2525 PF04563 RNA polymerase beta subunit VCSRO5_2525 PF04561 RNA polymerase Rpb2, domain 2 VCSRO5_2525 PF04565 RNA polymerase Rpb2, domain 3 VCSRO5_2525 PF10385 RNA polymerase beta subunit external 1 domain VCSRO5_2525 PF00562 RNA polymerase Rpb2, domain 6 VCSRO5_2525 PF04560 RNA polymerase Rpb2, domain 7 VCSRO5_2526 PF00542 Ribosomal protein L7/L12 C-terminal domain VCSRO5_2526 PF16320 Ribosomal protein L7/L12 dimerisation domain VCSRO5_2527 PF00466 Ribosomal protein L10 VCSRO5_2528 PF00687 Ribosomal protein L1p/L10e family VCSRO5_2529 PF00298 Ribosomal protein L11, RNA binding domain VCSRO5_2529 PF03946 Ribosomal protein L11, N-terminal domain VCSRO5_2530 PF00467 KOW motif VCSRO5_2530 PF02357 Transcription termination factor nusG VCSRO5_2531 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VCSRO5_2532 PF00009 Elongation factor Tu GTP binding domain VCSRO5_2532 PF03143 Elongation factor Tu C-terminal domain VCSRO5_2532 PF03144 Elongation factor Tu domain 2 VCSRO5_2537 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO5_2538 PF02237 Biotin protein ligase C terminal domain VCSRO5_2538 PF03099 Biotin/lipoate A/B protein ligase family VCSRO5_2538 PF08279 HTH domain VCSRO5_2539 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VCSRO5_2539 PF01565 FAD binding domain VCSRO5_2541 PF13091 PLD-like domain VCSRO5_2555 PF00175 Oxidoreductase NAD-binding domain VCSRO5_2556 PF00970 Oxidoreductase FAD-binding domain VCSRO5_2556 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO5_2556 PF00175 Oxidoreductase NAD-binding domain VCSRO5_2557 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VCSRO5_2559 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO5_2559 PF07498 Rho termination factor, N-terminal domain VCSRO5_2559 PF07497 Rho termination factor, RNA-binding domain VCSRO5_2560 PF00085 Thioredoxin VCSRO5_2561 PF00270 DEAD/DEAH box helicase VCSRO5_2561 PF00271 Helicase conserved C-terminal domain VCSRO5_2562 PF02541 Ppx/GppA phosphatase family VCSRO5_2563 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_2563 PF09456 RcsC Alpha-Beta-Loop (ABL) VCSRO5_2563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_2563 PF00072 Response regulator receiver domain VCSRO5_2564 PF12832 MFS_1 like family VCSRO5_2567 PF16177 Acetyl-coenzyme A synthetase N-terminus VCSRO5_2567 PF00501 AMP-binding enzyme VCSRO5_2567 PF13193 AMP-binding enzyme C-terminal domain VCSRO5_2568 PF01220 Dehydroquinase class II VCSRO5_2569 PF00364 Biotin-requiring enzyme VCSRO5_2570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VCSRO5_2570 PF02785 Biotin carboxylase C-terminal domain VCSRO5_2570 PF00289 Biotin carboxylase, N-terminal domain VCSRO5_2572 PF01207 Dihydrouridine synthase (Dus) VCSRO5_2573 PF02954 Bacterial regulatory protein, Fis family VCSRO5_2574 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_2574 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO5_2575 PF00920 Dehydratase family VCSRO5_2576 PF01202 Shikimate kinase VCSRO5_2577 PF02447 GntP family permease VCSRO5_2578 PF01081 KDPG and KHG aldolase VCSRO5_2579 PF00593 TonB dependent receptor VCSRO5_2579 PF07715 TonB-dependent Receptor Plug Domain VCSRO5_2581 PF00672 HAMP domain VCSRO5_2581 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_2581 PF17200 Single Cache domain 2 VCSRO5_2582 PF01276 Orn/Lys/Arg decarboxylase, major domain VCSRO5_2582 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VCSRO5_2582 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VCSRO5_2583 PF13520 Amino acid permease VCSRO5_2584 PF18500 CadC C-terminal domain 1 VCSRO5_2584 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_2585 PF13411 MerR HTH family regulatory protein VCSRO5_2586 PF01808 AICARFT/IMPCHase bienzyme VCSRO5_2586 PF02142 MGS-like domain VCSRO5_2587 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VCSRO5_2587 PF02843 Phosphoribosylglycinamide synthetase, C domain VCSRO5_2587 PF02844 Phosphoribosylglycinamide synthetase, N domain VCSRO5_2589 PF00216 Bacterial DNA-binding protein VCSRO5_2590 PF00571 CBS domain VCSRO5_2590 PF01595 Cyclin M transmembrane N-terminal domain VCSRO5_2594 PF13737 Transposase DDE domain VCSRO5_2596 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VCSRO5_2598 PF06082 Exopolysaccharide biosynthesis protein YbjH VCSRO5_2599 PF04222 Protein of unknown function (DUF416) VCSRO5_2600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO5_2601 PF03167 Uracil DNA glycosylase superfamily VCSRO5_2602 PF00924 Mechanosensitive ion channel VCSRO5_2605 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VCSRO5_2605 PF10996 Beta-Casp domain VCSRO5_2605 PF00753 Metallo-beta-lactamase superfamily VCSRO5_2606 PF01609 Transposase DDE domain VCSRO5_2606 PF13006 Insertion element 4 transposase N-terminal VCSRO5_2607 PF02719 Polysaccharide biosynthesis protein VCSRO5_2608 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VCSRO5_2610 PF02397 Bacterial sugar transferase VCSRO5_2611 PF13439 Glycosyltransferase Family 4 VCSRO5_2611 PF00534 Glycosyl transferases group 1 VCSRO5_2615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VCSRO5_2619 PF05523 WxcM-like, C-terminal VCSRO5_2620 PF00483 Nucleotidyl transferase VCSRO5_2621 PF16363 GDP-mannose 4,6 dehydratase VCSRO5_2622 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VCSRO5_2622 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VCSRO5_2622 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VCSRO5_2623 PF02350 UDP-N-acetylglucosamine 2-epimerase VCSRO5_2624 PF02706 Chain length determinant protein VCSRO5_2625 PF01370 NAD dependent epimerase/dehydratase family VCSRO5_2626 PF00457 Glycosyl hydrolases family 11 VCSRO5_2626 PF01522 Polysaccharide deacetylase VCSRO5_2630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO5_2631 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VCSRO5_2632 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VCSRO5_2637 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_2638 PF01757 Acyltransferase family VCSRO5_2640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO5_2641 PF00535 Glycosyl transferase family 2 VCSRO5_2642 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO5_2643 PF01467 Cytidylyltransferase-like VCSRO5_2644 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VCSRO5_2644 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VCSRO5_2644 PF06827 Zinc finger found in FPG and IleRS VCSRO5_2646 PF00471 Ribosomal protein L33 VCSRO5_2647 PF00830 Ribosomal L28 family VCSRO5_2648 PF04002 RadC-like JAB domain VCSRO5_2649 PF02743 Cache domain VCSRO5_2649 PF00672 HAMP domain VCSRO5_2649 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_2650 PF04127 DNA / pantothenate metabolism flavoprotein VCSRO5_2650 PF02441 Flavoprotein VCSRO5_2651 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_2652 PF03279 Bacterial lipid A biosynthesis acyltransferase VCSRO5_2653 PF03279 Bacterial lipid A biosynthesis acyltransferase VCSRO5_2654 PF00156 Phosphoribosyl transferase domain VCSRO5_2655 PF01138 3' exoribonuclease family, domain 1 VCSRO5_2655 PF03725 3' exoribonuclease family, domain 2 VCSRO5_2656 PF08340 Domain of unknown function (DUF1732) VCSRO5_2656 PF03755 YicC-like family, N-terminal region VCSRO5_2657 PF03350 Uncharacterized protein family, UPF0114 VCSRO5_2658 PF00367 phosphotransferase system, EIIB VCSRO5_2658 PF02378 Phosphotransferase system, EIIC VCSRO5_2659 PF13580 SIS domain VCSRO5_2660 PF01380 SIS domain VCSRO5_2660 PF01418 Helix-turn-helix domain, rpiR family VCSRO5_2661 PF01032 FecCD transport family VCSRO5_2662 PF01497 Periplasmic binding protein VCSRO5_2663 PF00005 ABC transporter VCSRO5_2664 PF07715 TonB-dependent Receptor Plug Domain VCSRO5_2664 PF00593 TonB dependent receptor VCSRO5_2665 PF00664 ABC transporter transmembrane region VCSRO5_2665 PF00005 ABC transporter VCSRO5_2668 PF00270 DEAD/DEAH box helicase VCSRO5_2668 PF00271 Helicase conserved C-terminal domain VCSRO5_2668 PF00570 HRDC domain VCSRO5_2668 PF16124 RecQ zinc-binding VCSRO5_2668 PF09382 RQC domain VCSRO5_2669 PF00892 EamA-like transporter family VCSRO5_2671 PF12833 Helix-turn-helix domain VCSRO5_2672 PF01810 LysE type translocator VCSRO5_2673 PF13361 UvrD-like helicase C-terminal domain VCSRO5_2673 PF00580 UvrD/REP helicase N-terminal domain VCSRO5_2674 PF01432 Peptidase family M3 VCSRO5_2675 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VCSRO5_2676 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_2676 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO5_2678 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2678 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO5_2679 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO5_2681 PF00005 ABC transporter VCSRO5_2681 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_2687 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCSRO5_2688 PF00580 UvrD/REP helicase N-terminal domain VCSRO5_2688 PF13361 UvrD-like helicase C-terminal domain VCSRO5_2689 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_2690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO5_2691 PF00873 AcrB/AcrD/AcrF family VCSRO5_2692 PF04380 Membrane fusogenic activity VCSRO5_2693 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VCSRO5_2693 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VCSRO5_2694 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_2694 PF03466 LysR substrate binding domain VCSRO5_2702 PF12724 Flavodoxin domain VCSRO5_2703 PF02386 Cation transport protein VCSRO5_2704 PF09186 Domain of unknown function (DUF1949) VCSRO5_2704 PF01205 Uncharacterized protein family UPF0029 VCSRO5_2705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VCSRO5_2705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VCSRO5_2705 PF00378 Enoyl-CoA hydratase/isomerase VCSRO5_2706 PF02803 Thiolase, C-terminal domain VCSRO5_2706 PF00108 Thiolase, N-terminal domain VCSRO5_2707 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_2707 PF03466 LysR substrate binding domain VCSRO5_2708 PF07690 Major Facilitator Superfamily VCSRO5_2709 PF12804 MobA-like NTP transferase domain VCSRO5_2709 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_2710 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VCSRO5_2710 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VCSRO5_2711 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO5_2711 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCSRO5_2712 PF00231 ATP synthase VCSRO5_2713 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO5_2713 PF00306 ATP synthase alpha/beta chain, C terminal domain VCSRO5_2713 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCSRO5_2714 PF00213 ATP synthase delta (OSCP) subunit VCSRO5_2715 PF00430 ATP synthase B/B' CF(0) VCSRO5_2716 PF00137 ATP synthase subunit C VCSRO5_2717 PF00119 ATP synthase A chain VCSRO5_2718 PF03899 ATP synthase I chain VCSRO5_2719 PF17762 HTH domain found in ParB protein VCSRO5_2719 PF02195 ParB-like nuclease domain VCSRO5_2720 PF13614 AAA domain VCSRO5_2721 PF02527 rRNA small subunit methyltransferase G VCSRO5_2722 PF01134 Glucose inhibited division protein A VCSRO5_2722 PF13932 GidA associated domain VCSRO5_2727 PF01709 Transcriptional regulator VCSRO5_2728 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VCSRO5_2728 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VCSRO5_2729 PF17200 Single Cache domain 2 VCSRO5_2729 PF00672 HAMP domain VCSRO5_2729 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_2730 PF10928 Protein of unknown function (DUF2810) VCSRO5_2731 PF17874 MalT-like TPR region VCSRO5_2731 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_2732 PF00343 Carbohydrate phosphorylase VCSRO5_2733 PF02446 4-alpha-glucanotransferase VCSRO5_2734 PF00128 Alpha amylase, catalytic domain VCSRO5_2734 PF02806 Alpha amylase, C-terminal all-beta domain VCSRO5_2734 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO5_2735 PF05638 Type VI secretion system effector, Hcp VCSRO5_2736 PF04717 Type VI secretion system, phage-baseplate injector VCSRO5_2740 PF01124 MAPEG family VCSRO5_2741 PF01757 Acyltransferase family VCSRO5_2741 PF00842 Alanine racemase, C-terminal domain VCSRO5_2741 PF01168 Alanine racemase, N-terminal domain VCSRO5_2743 PF00939 Sodium:sulfate symporter transmembrane region VCSRO5_2744 PF01609 Transposase DDE domain VCSRO5_2744 PF13006 Insertion element 4 transposase N-terminal VCSRO5_2745 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO5_2746 PF00704 Glycosyl hydrolases family 18 VCSRO5_2746 PF08329 Chitinase A, N-terminal domain VCSRO5_2750 PF00672 HAMP domain VCSRO5_2750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_2750 PF02743 Cache domain VCSRO5_2754 PF01569 PAP2 superfamily VCSRO5_2755 PF00375 Sodium:dicarboxylate symporter family VCSRO5_2757 PF02630 SCO1/SenC VCSRO5_2760 PF03616 Sodium/glutamate symporter VCSRO5_2761 PF12945 Flagellar protein YcgR VCSRO5_2761 PF07238 PilZ domain VCSRO5_2764 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2767 PF01048 Phosphorylase superfamily VCSRO5_2768 PF08349 Protein of unknown function (DUF1722) VCSRO5_2769 PF13411 MerR HTH family regulatory protein VCSRO5_2770 PF00875 DNA photolyase VCSRO5_2770 PF03441 FAD binding domain of DNA photolyase VCSRO5_2771 PF17969 L,D-transpeptidase C-terminal domain VCSRO5_2771 PF01476 LysM domain VCSRO5_2771 PF03734 L,D-transpeptidase catalytic domain VCSRO5_2773 PF00271 Helicase conserved C-terminal domain VCSRO5_2773 PF00270 DEAD/DEAH box helicase VCSRO5_2774 PF00326 Prolyl oligopeptidase family VCSRO5_2774 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VCSRO5_2775 PF07715 TonB-dependent Receptor Plug Domain VCSRO5_2775 PF00593 TonB dependent receptor VCSRO5_2779 PF12849 PBP superfamily domain VCSRO5_2780 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2781 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_2782 PF00005 ABC transporter VCSRO5_2783 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2783 PF00563 EAL domain VCSRO5_2783 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_2786 PF07670 Nucleoside recognition VCSRO5_2787 PF01740 STAS domain VCSRO5_2787 PF00916 Sulfate permease family VCSRO5_2789 PF01551 Peptidase family M23 VCSRO5_2789 PF01476 LysM domain VCSRO5_2789 PF08525 Opacity-associated protein A N-terminal motif VCSRO5_2790 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2790 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_2790 PF13188 PAS domain VCSRO5_2790 PF00563 EAL domain VCSRO5_2791 PF03466 LysR substrate binding domain VCSRO5_2791 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_2792 PF07690 Major Facilitator Superfamily VCSRO5_2793 PF00376 MerR family regulatory protein VCSRO5_2793 PF09278 MerR, DNA binding VCSRO5_2797 PF00375 Sodium:dicarboxylate symporter family VCSRO5_2799 PF02001 Protein of unknown function DUF134 VCSRO5_2802 PF01483 Proprotein convertase P-domain VCSRO5_2802 PF01447 Thermolysin metallopeptidase, catalytic domain VCSRO5_2802 PF02868 Thermolysin metallopeptidase, alpha-helical domain VCSRO5_2802 PF07504 Fungalysin/Thermolysin Propeptide Motif VCSRO5_2804 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VCSRO5_2804 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VCSRO5_2805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCSRO5_2805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VCSRO5_2806 PF00581 Rhodanese-like domain VCSRO5_2807 PF00563 EAL domain VCSRO5_2807 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_2808 PF13419 Haloacid dehalogenase-like hydrolase VCSRO5_2809 PF01740 STAS domain VCSRO5_2809 PF00916 Sulfate permease family VCSRO5_2810 PF00849 RNA pseudouridylate synthase VCSRO5_2814 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VCSRO5_2816 PF05947 Type VI secretion system, TssF VCSRO5_2820 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VCSRO5_2822 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO5_2822 PF07724 AAA domain (Cdc48 subfamily) VCSRO5_2822 PF17871 AAA lid domain VCSRO5_2822 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO5_2823 PF00158 Sigma-54 interaction domain VCSRO5_2823 PF02954 Bacterial regulatory protein, Fis family VCSRO5_2826 PF14331 ImcF-related N-terminal domain VCSRO5_2826 PF06744 Type VI secretion protein IcmF C-terminal VCSRO5_2826 PF06761 Intracellular multiplication and human macrophage-killing VCSRO5_2828 PF04717 Type VI secretion system, phage-baseplate injector VCSRO5_2828 PF01471 Putative peptidoglycan binding domain VCSRO5_2831 PF05025 RbsD / FucU transport protein family VCSRO5_2832 PF00005 ABC transporter VCSRO5_2833 PF02653 Branched-chain amino acid transport system / permease component VCSRO5_2834 PF13407 Periplasmic binding protein domain VCSRO5_2835 PF00294 pfkB family carbohydrate kinase VCSRO5_2836 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_2837 PF04973 Nicotinamide mononucleotide transporter VCSRO5_2838 PF01048 Phosphorylase superfamily VCSRO5_2840 PF03009 Glycerophosphoryl diester phosphodiesterase family VCSRO5_2841 PF07690 Major Facilitator Superfamily VCSRO5_2844 PF02743 Cache domain VCSRO5_2844 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_2844 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_2845 PF00158 Sigma-54 interaction domain VCSRO5_2845 PF00072 Response regulator receiver domain VCSRO5_2845 PF02954 Bacterial regulatory protein, Fis family VCSRO5_2848 PF01266 FAD dependent oxidoreductase VCSRO5_2849 PF00041 Fibronectin type III domain VCSRO5_2849 PF12561 ToxR activated gene A lipoprotein domain VCSRO5_2850 PF01797 Transposase IS200 like VCSRO5_2852 PF01327 Polypeptide deformylase VCSRO5_2853 PF00175 Oxidoreductase NAD-binding domain VCSRO5_2853 PF00970 Oxidoreductase FAD-binding domain VCSRO5_2853 PF00042 Globin VCSRO5_2854 PF03334 Na+/H+ antiporter subunit VCSRO5_2855 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VCSRO5_2856 PF01899 Na+/H+ ion antiporter subunit VCSRO5_2857 PF00361 Proton-conducting membrane transporter VCSRO5_2858 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VCSRO5_2859 PF13244 Domain of unknown function (DUF4040) VCSRO5_2859 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VCSRO5_2859 PF00361 Proton-conducting membrane transporter VCSRO5_2859 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCSRO5_2861 PF00582 Universal stress protein family VCSRO5_2862 PF03222 Tryptophan/tyrosine permease family VCSRO5_2863 PF01212 Beta-eliminating lyase VCSRO5_2865 PF12843 Putative quorum-sensing-regulated virulence factor VCSRO5_2867 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2867 PF00563 EAL domain VCSRO5_2867 PF08448 PAS fold VCSRO5_2868 PF00313 'Cold-shock' DNA-binding domain VCSRO5_2871 PF13519 von Willebrand factor type A domain VCSRO5_2871 PF07584 Aerotolerance regulator N-terminal VCSRO5_2874 PF01882 Protein of unknown function DUF58 VCSRO5_2875 PF17863 AAA lid domain VCSRO5_2875 PF07726 ATPase family associated with various cellular activities (AAA) VCSRO5_2876 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_2876 PF02743 Cache domain VCSRO5_2876 PF00672 HAMP domain VCSRO5_2879 PF07670 Nucleoside recognition VCSRO5_2879 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO5_2879 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO5_2880 PF07687 Peptidase dimerisation domain VCSRO5_2880 PF01546 Peptidase family M20/M25/M40 VCSRO5_2882 PF01590 GAF domain VCSRO5_2882 PF00158 Sigma-54 interaction domain VCSRO5_2883 PF00970 Oxidoreductase FAD-binding domain VCSRO5_2883 PF00175 Oxidoreductase NAD-binding domain VCSRO5_2883 PF00042 Globin VCSRO5_2884 PF00313 'Cold-shock' DNA-binding domain VCSRO5_2885 PF03889 Alternative ribosome-rescue factor A VCSRO5_2888 PF00072 Response regulator receiver domain VCSRO5_2890 PF01256 Carbohydrate kinase VCSRO5_2890 PF03853 YjeF-related protein N-terminus VCSRO5_2891 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO5_2891 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO5_2893 PF07885 Ion channel VCSRO5_2895 PF00478 IMP dehydrogenase / GMP reductase domain VCSRO5_2897 PF00270 DEAD/DEAH box helicase VCSRO5_2897 PF00271 Helicase conserved C-terminal domain VCSRO5_2898 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCSRO5_2899 PF02540 NAD synthase VCSRO5_2900 PF01467 Cytidylyltransferase-like VCSRO5_2901 PF11849 Domain of unknown function (DUF3369) VCSRO5_2902 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_2902 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_2902 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_2904 PF03553 Na+/H+ antiporter family VCSRO5_2905 PF07690 Major Facilitator Superfamily VCSRO5_2907 PF05230 MASE2 domain VCSRO5_2907 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_2908 PF00657 GDSL-like Lipase/Acylhydrolase VCSRO5_2909 PF16458 Beta-prism lectin VCSRO5_2909 PF12563 Hemolytic toxin N terminal VCSRO5_2909 PF07968 Leukocidin/Hemolysin toxin family VCSRO5_2910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_2910 PF00672 HAMP domain VCSRO5_2910 PF12729 Four helix bundle sensory module for signal transduction VCSRO5_2911 PF00561 alpha/beta hydrolase fold VCSRO5_2912 PF03280 Proteobacterial lipase chaperone protein VCSRO5_2913 PF05547 Immune inhibitor A peptidase M6 VCSRO5_2913 PF00801 PKD domain VCSRO5_2917 PF01032 FecCD transport family VCSRO5_2918 PF01032 FecCD transport family VCSRO5_2919 PF00005 ABC transporter VCSRO5_2920 PF12833 Helix-turn-helix domain VCSRO5_2921 PF07715 TonB-dependent Receptor Plug Domain VCSRO5_2921 PF00593 TonB dependent receptor VCSRO5_2923 PF00871 Acetokinase family VCSRO5_2926 PF00672 HAMP domain VCSRO5_2926 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_2926 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_2927 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_2927 PF00072 Response regulator receiver domain VCSRO5_2929 PF01261 Xylose isomerase-like TIM barrel VCSRO5_2930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VCSRO5_2932 PF00596 Class II Aldolase and Adducin N-terminal domain VCSRO5_2933 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO5_2934 PF03611 PTS system sugar-specific permease component VCSRO5_2935 PF00455 DeoR C terminal sensor domain VCSRO5_2935 PF08220 DeoR-like helix-turn-helix domain VCSRO5_2938 PF00128 Alpha amylase, catalytic domain VCSRO5_2939 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_2942 PF00072 Response regulator receiver domain VCSRO5_2942 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_2951 PF01810 LysE type translocator VCSRO5_2952 PF03466 LysR substrate binding domain VCSRO5_2952 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_2954 PF00672 HAMP domain VCSRO5_2954 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_2954 PF02743 Cache domain VCSRO5_2955 PF00282 Pyridoxal-dependent decarboxylase conserved domain VCSRO5_2956 PF07943 Penicillin-binding protein 5, C-terminal domain VCSRO5_2956 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO5_2959 PF00194 Eukaryotic-type carbonic anhydrase VCSRO5_2961 PF02347 Glycine cleavage system P-protein VCSRO5_2962 PF01597 Glycine cleavage H-protein VCSRO5_2963 PF00464 Serine hydroxymethyltransferase VCSRO5_2965 PF01571 Aminomethyltransferase folate-binding domain VCSRO5_2965 PF08669 Glycine cleavage T-protein C-terminal barrel domain VCSRO5_2966 PF02824 TGS domain VCSRO5_2966 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO5_2966 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VCSRO5_2966 PF03129 Anticodon binding domain VCSRO5_2967 PF00707 Translation initiation factor IF-3, C-terminal domain VCSRO5_2967 PF05198 Translation initiation factor IF-3, N-terminal domain VCSRO5_2968 PF01632 Ribosomal protein L35 VCSRO5_2969 PF00453 Ribosomal protein L20 VCSRO5_2970 PF13495 Phage integrase, N-terminal SAM-like domain VCSRO5_2970 PF00589 Phage integrase family VCSRO5_2971 PF04229 GrpB protein VCSRO5_2975 PF04229 GrpB protein VCSRO5_2980 PF01636 Phosphotransferase enzyme family VCSRO5_2983 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH VCSRO5_2986 PF13302 Acetyltransferase (GNAT) domain VCSRO5_2992 PF13419 Haloacid dehalogenase-like hydrolase VCSRO5_2999 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO5_3008 PF00583 Acetyltransferase (GNAT) family VCSRO5_3009 PF02567 Phenazine biosynthesis-like protein VCSRO5_3010 PF02567 Phenazine biosynthesis-like protein VCSRO5_3023 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO5_3038 PF09722 Protein of unknown function (DUF2384) VCSRO5_3043 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH VCSRO5_3049 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_3050 PF13737 Transposase DDE domain VCSRO5_3051 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_3055 PF13737 Transposase DDE domain VCSRO5_3062 PF00583 Acetyltransferase (GNAT) family VCSRO5_3064 PF00293 NUDIX domain VCSRO5_3065 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ VCSRO5_3070 PF02567 Phenazine biosynthesis-like protein VCSRO5_3071 PF02567 Phenazine biosynthesis-like protein VCSRO5_3081 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO5_3084 PF13737 Transposase DDE domain VCSRO5_3089 PF03477 ATP cone domain VCSRO5_3089 PF13597 Anaerobic ribonucleoside-triphosphate reductase VCSRO5_3091 PF00155 Aminotransferase class I and II VCSRO5_3092 PF18030 RimK PreATP-grasp domain VCSRO5_3092 PF08443 RimK-like ATP-grasp domain VCSRO5_3093 PF02378 Phosphotransferase system, EIIC VCSRO5_3093 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO5_3094 PF00294 pfkB family carbohydrate kinase VCSRO5_3095 PF00381 PTS HPr component phosphorylation site VCSRO5_3095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO5_3096 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_3096 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO5_3097 PF00149 Calcineurin-like phosphoesterase VCSRO5_3097 PF12320 Type 5 capsule protein repressor C-terminal domain VCSRO5_3098 PF13476 AAA domain VCSRO5_3099 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3099 PF00072 Response regulator receiver domain VCSRO5_3100 PF00155 Aminotransferase class I and II VCSRO5_3102 PF00654 Voltage gated chloride channel VCSRO5_3103 PF07683 Cobalamin synthesis protein cobW C-terminal domain VCSRO5_3103 PF02492 CobW/HypB/UreG, nucleotide-binding domain VCSRO5_3104 PF01926 50S ribosome-binding GTPase VCSRO5_3105 PF02705 K+ potassium transporter VCSRO5_3106 PF10371 Domain of unknown function VCSRO5_3106 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VCSRO5_3106 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VCSRO5_3106 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VCSRO5_3106 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO5_3107 PF13493 Domain of unknown function (DUF4118) VCSRO5_3107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3107 PF02702 Osmosensitive K+ channel His kinase sensor domain VCSRO5_3107 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_3108 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_3108 PF00072 Response regulator receiver domain VCSRO5_3109 PF02416 mttA/Hcf106 family VCSRO5_3110 PF09335 SNARE associated Golgi protein VCSRO5_3112 PF00563 EAL domain VCSRO5_3112 PF10388 EAL-domain associated signalling protein domain VCSRO5_3114 PF01292 Prokaryotic cytochrome b561 VCSRO5_3115 PF04264 YceI-like domain VCSRO5_3116 PF01226 Formate/nitrite transporter VCSRO5_3117 PF03466 LysR substrate binding domain VCSRO5_3117 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3118 PF06496 Protein of unknown function (DUF1097) VCSRO5_3119 PF11398 Protein of unknown function (DUF2813) VCSRO5_3120 PF02872 5'-nucleotidase, C-terminal domain VCSRO5_3120 PF00149 Calcineurin-like phosphoesterase VCSRO5_3122 PF03741 Integral membrane protein TerC family VCSRO5_3124 PF01609 Transposase DDE domain VCSRO5_3124 PF13006 Insertion element 4 transposase N-terminal VCSRO5_3125 PF08274 PhnA Zinc-Ribbon VCSRO5_3125 PF03831 PhnA domain VCSRO5_3131 PF08448 PAS fold VCSRO5_3131 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3135 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3138 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VCSRO5_3138 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VCSRO5_3138 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VCSRO5_3139 PF02233 NAD(P) transhydrogenase beta subunit VCSRO5_3141 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_3141 PF00072 Response regulator receiver domain VCSRO5_3144 PF03701 Uncharacterised protein family (UPF0181) VCSRO5_3145 PF01253 Translation initiation factor SUI1 VCSRO5_3147 PF01820 D-ala D-ala ligase N-terminus VCSRO5_3147 PF07478 D-ala D-ala ligase C-terminus VCSRO5_3149 PF13607 Succinyl-CoA ligase like flavodoxin domain VCSRO5_3149 PF13380 CoA binding domain VCSRO5_3149 PF00583 Acetyltransferase (GNAT) family VCSRO5_3150 PF03466 LysR substrate binding domain VCSRO5_3150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3151 PF00593 TonB dependent receptor VCSRO5_3151 PF07715 TonB-dependent Receptor Plug Domain VCSRO5_3152 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO5_3152 PF12793 Sugar transport-related sRNA regulator N-term VCSRO5_3154 PF03061 Thioesterase superfamily VCSRO5_3158 PF02798 Glutathione S-transferase, N-terminal domain VCSRO5_3158 PF00043 Glutathione S-transferase, C-terminal domain VCSRO5_3161 PF12804 MobA-like NTP transferase domain VCSRO5_3161 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_3161 PF03479 Plants and Prokaryotes Conserved (PCC) domain VCSRO5_3162 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_3162 PF00005 ABC transporter VCSRO5_3163 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3163 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO5_3164 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO5_3171 PF00854 POT family VCSRO5_3173 PF00392 Bacterial regulatory proteins, gntR family VCSRO5_3173 PF07702 UTRA domain VCSRO5_3174 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3175 PF00005 ABC transporter VCSRO5_3177 PF00266 Aminotransferase class-V VCSRO5_3178 PF00202 Aminotransferase class-III VCSRO5_3179 PF13419 Haloacid dehalogenase-like hydrolase VCSRO5_3180 PF14760 Rnk N-terminus VCSRO5_3180 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO5_3181 PF13419 Haloacid dehalogenase-like hydrolase VCSRO5_3182 PF03466 LysR substrate binding domain VCSRO5_3182 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3185 PF01741 Large-conductance mechanosensitive channel, MscL VCSRO5_3186 PF01268 Formate--tetrahydrofolate ligase VCSRO5_3187 PF01641 SelR domain VCSRO5_3187 PF01625 Peptide methionine sulfoxide reductase VCSRO5_3188 PF01227 GTP cyclohydrolase I VCSRO5_3189 PF03453 MoeA N-terminal region (domain I and II) VCSRO5_3189 PF03454 MoeA C-terminal region (domain IV) VCSRO5_3189 PF00994 Probable molybdopterin binding domain VCSRO5_3190 PF00899 ThiF family VCSRO5_3192 PF00581 Rhodanese-like domain VCSRO5_3193 PF04198 Putative sugar-binding domain VCSRO5_3194 PF00923 Transaldolase/Fructose-6-phosphate aldolase VCSRO5_3195 PF02779 Transketolase, pyrimidine binding domain VCSRO5_3195 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO5_3195 PF02780 Transketolase, C-terminal domain VCSRO5_3201 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO5_3201 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO5_3204 PF06942 GlpM protein VCSRO5_3206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3206 PF03466 LysR substrate binding domain VCSRO5_3207 PF03992 Antibiotic biosynthesis monooxygenase VCSRO5_3208 PF00881 Nitroreductase family VCSRO5_3209 PF00873 AcrB/AcrD/AcrF family VCSRO5_3212 PF04143 Sulphur transport VCSRO5_3215 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO5_3215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO5_3224 PF00367 phosphotransferase system, EIIB VCSRO5_3224 PF02378 Phosphotransferase system, EIIC VCSRO5_3225 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_3226 PF00251 Glycosyl hydrolases family 32 N-terminal domain VCSRO5_3226 PF08244 Glycosyl hydrolases family 32 C terminal VCSRO5_3227 PF00294 pfkB family carbohydrate kinase VCSRO5_3228 PF01266 FAD dependent oxidoreductase VCSRO5_3228 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VCSRO5_3229 PF17200 Single Cache domain 2 VCSRO5_3229 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3229 PF00672 HAMP domain VCSRO5_3230 PF13488 Glycine zipper VCSRO5_3230 PF00691 OmpA family VCSRO5_3231 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO5_3231 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO5_3232 PF13419 Haloacid dehalogenase-like hydrolase VCSRO5_3233 PF12729 Four helix bundle sensory module for signal transduction VCSRO5_3233 PF00672 HAMP domain VCSRO5_3233 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3234 PF03606 C4-dicarboxylate anaerobic carrier VCSRO5_3235 PF03315 Serine dehydratase beta chain VCSRO5_3235 PF03313 Serine dehydratase alpha chain VCSRO5_3236 PF00474 Sodium:solute symporter family VCSRO5_3240 PF00356 Bacterial regulatory proteins, lacI family VCSRO5_3241 PF00072 Response regulator receiver domain VCSRO5_3241 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_3242 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VCSRO5_3242 PF07730 Histidine kinase VCSRO5_3242 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3242 PF00672 HAMP domain VCSRO5_3243 PF13187 4Fe-4S dicluster domain VCSRO5_3243 PF12838 4Fe-4S dicluster domain VCSRO5_3245 PF00384 Molybdopterin oxidoreductase VCSRO5_3245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCSRO5_3245 PF01568 Molydopterin dinucleotide binding domain VCSRO5_3246 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VCSRO5_3247 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO5_3249 PF01966 HD domain VCSRO5_3250 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_3250 PF00072 Response regulator receiver domain VCSRO5_3251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3251 PF07730 Histidine kinase VCSRO5_3251 PF05231 MASE1 VCSRO5_3252 PF07690 Major Facilitator Superfamily VCSRO5_3254 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3255 PF08402 TOBE domain VCSRO5_3255 PF00005 ABC transporter VCSRO5_3256 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VCSRO5_3258 PF00108 Thiolase, N-terminal domain VCSRO5_3258 PF02803 Thiolase, C-terminal domain VCSRO5_3259 PF00106 short chain dehydrogenase VCSRO5_3260 PF02355 Protein export membrane protein VCSRO5_3260 PF07549 SecD/SecF GG Motif VCSRO5_3261 PF02355 Protein export membrane protein VCSRO5_3261 PF13721 SecD export protein N-terminal TM region VCSRO5_3261 PF07549 SecD/SecF GG Motif VCSRO5_3264 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3265 PF00483 Nucleotidyl transferase VCSRO5_3266 PF00704 Glycosyl hydrolases family 18 VCSRO5_3266 PF06483 Chitinase C VCSRO5_3267 PF00465 Iron-containing alcohol dehydrogenase VCSRO5_3269 PF14532 Sigma-54 interaction domain VCSRO5_3269 PF00072 Response regulator receiver domain VCSRO5_3269 PF02954 Bacterial regulatory protein, Fis family VCSRO5_3270 PF02954 Bacterial regulatory protein, Fis family VCSRO5_3270 PF00072 Response regulator receiver domain VCSRO5_3270 PF14532 Sigma-54 interaction domain VCSRO5_3271 PF02743 Cache domain VCSRO5_3271 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_3271 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3273 PF07690 Major Facilitator Superfamily VCSRO5_3274 PF00224 Pyruvate kinase, barrel domain VCSRO5_3274 PF02887 Pyruvate kinase, alpha/beta domain VCSRO5_3275 PF17149 Periplasmic sensor domain found in signal transduction proteins VCSRO5_3275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3275 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_3275 PF01627 Hpt domain VCSRO5_3275 PF00072 Response regulator receiver domain VCSRO5_3275 PF00672 HAMP domain VCSRO5_3276 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO5_3277 PF02142 MGS-like domain VCSRO5_3278 PF00857 Isochorismatase family VCSRO5_3279 PF01219 Prokaryotic diacylglycerol kinase VCSRO5_3282 PF12462 DNA helicase IV / RNA helicase N terminal VCSRO5_3282 PF00580 UvrD/REP helicase N-terminal domain VCSRO5_3282 PF13361 UvrD-like helicase C-terminal domain VCSRO5_3283 PF12805 FUSC-like inner membrane protein yccS VCSRO5_3284 PF08448 PAS fold VCSRO5_3284 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_3284 PF13188 PAS domain VCSRO5_3284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3284 PF00072 Response regulator receiver domain VCSRO5_3289 PF00005 ABC transporter VCSRO5_3289 PF03459 TOBE domain VCSRO5_3290 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3292 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VCSRO5_3292 PF07685 CobB/CobQ-like glutamine amidotransferase domain VCSRO5_3299 PF00072 Response regulator receiver domain VCSRO5_3299 PF09308 LuxQ, periplasmic VCSRO5_3299 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_3299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3300 PF13407 Periplasmic binding protein domain VCSRO5_3302 PF01541 GIY-YIG catalytic domain VCSRO5_3303 PF04337 Protein of unknown function, DUF480 VCSRO5_3305 PF04363 Protein of unknown function (DUF496) VCSRO5_3308 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VCSRO5_3308 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VCSRO5_3309 PF00230 Major intrinsic protein VCSRO5_3310 PF01266 FAD dependent oxidoreductase VCSRO5_3310 PF04324 BFD-like [2Fe-2S] binding domain VCSRO5_3311 PF00890 FAD binding domain VCSRO5_3312 PF02754 Cysteine-rich domain VCSRO5_3312 PF13183 4Fe-4S dicluster domain VCSRO5_3313 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCSRO5_3313 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VCSRO5_3314 PF00085 Thioredoxin VCSRO5_3315 PF07690 Major Facilitator Superfamily VCSRO5_3320 PF03466 LysR substrate binding domain VCSRO5_3320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3321 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3322 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3323 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_3324 PF00005 ABC transporter VCSRO5_3326 PF05762 VWA domain containing CoxE-like protein VCSRO5_3327 PF12592 Protein of unknown function (DUF3763) VCSRO5_3327 PF07728 AAA domain (dynein-related subfamily) VCSRO5_3327 PF17868 AAA lid domain VCSRO5_3328 PF00293 NUDIX domain VCSRO5_3329 PF01212 Beta-eliminating lyase VCSRO5_3330 PF00034 Cytochrome c VCSRO5_3331 PF08361 MAATS-type transcriptional repressor, C-terminal region VCSRO5_3331 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_3332 PF00270 DEAD/DEAH box helicase VCSRO5_3332 PF00271 Helicase conserved C-terminal domain VCSRO5_3333 PF04336 Acyl carrier protein phosphodiesterase VCSRO5_3335 PF03222 Tryptophan/tyrosine permease family VCSRO5_3336 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3336 PF02743 Cache domain VCSRO5_3336 PF00672 HAMP domain VCSRO5_3337 PF16363 GDP-mannose 4,6 dehydratase VCSRO5_3338 PF03746 LamB/YcsF family VCSRO5_3340 PF02626 Carboxyltransferase domain, subdomain A and B VCSRO5_3342 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VCSRO5_3342 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VCSRO5_3344 PF00005 ABC transporter VCSRO5_3345 PF13472 GDSL-like Lipase/Acylhydrolase family VCSRO5_3346 PF07055 Enoyl reductase FAD binding domain VCSRO5_3346 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VCSRO5_3346 PF12241 Trans-2-enoyl-CoA reductase catalytic region VCSRO5_3347 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3347 PF00498 FHA domain VCSRO5_3347 PF00563 EAL domain VCSRO5_3349 PF00684 DnaJ central domain VCSRO5_3349 PF01556 DnaJ C terminal domain VCSRO5_3349 PF00226 DnaJ domain VCSRO5_3353 PF13419 Haloacid dehalogenase-like hydrolase VCSRO5_3356 PF00294 pfkB family carbohydrate kinase VCSRO5_3357 PF00884 Sulfatase VCSRO5_3359 PF03880 DbpA RNA binding domain VCSRO5_3359 PF00270 DEAD/DEAH box helicase VCSRO5_3359 PF00271 Helicase conserved C-terminal domain VCSRO5_3360 PF08206 Ribonuclease B OB domain VCSRO5_3360 PF00773 RNB domain VCSRO5_3360 PF00575 S1 RNA binding domain VCSRO5_3362 PF12849 PBP superfamily domain VCSRO5_3363 PF01575 MaoC like domain VCSRO5_3364 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VCSRO5_3365 PF18416 N-acetylglucosamine binding protein domain 2 VCSRO5_3365 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VCSRO5_3366 PF02868 Thermolysin metallopeptidase, alpha-helical domain VCSRO5_3366 PF01447 Thermolysin metallopeptidase, catalytic domain VCSRO5_3366 PF03413 Peptidase propeptide and YPEB domain VCSRO5_3366 PF07504 Fungalysin/Thermolysin Propeptide Motif VCSRO5_3366 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO5_3367 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO5_3367 PF04389 Peptidase family M28 VCSRO5_3368 PF00491 Arginase family VCSRO5_3369 PF17944 Arginine decarboxylase C-terminal helical extension VCSRO5_3369 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VCSRO5_3369 PF17810 Arginine decarboxylase helical bundle domain VCSRO5_3371 PF00571 CBS domain VCSRO5_3371 PF03448 MgtE intracellular N domain VCSRO5_3371 PF01769 Divalent cation transporter VCSRO5_3372 PF00166 Chaperonin 10 Kd subunit VCSRO5_3373 PF00118 TCP-1/cpn60 chaperonin family VCSRO5_3375 PF00696 Amino acid kinase family VCSRO5_3375 PF13840 ACT domain VCSRO5_3376 PF06339 Ectoine synthase VCSRO5_3377 PF00202 Aminotransferase class-III VCSRO5_3378 PF00583 Acetyltransferase (GNAT) family VCSRO5_3379 PF01329 Pterin 4 alpha carbinolamine dehydratase VCSRO5_3380 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VCSRO5_3381 PF00501 AMP-binding enzyme VCSRO5_3381 PF13193 AMP-binding enzyme C-terminal domain VCSRO5_3385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3385 PF03466 LysR substrate binding domain VCSRO5_3387 PF00892 EamA-like transporter family VCSRO5_3388 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VCSRO5_3388 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO5_3388 PF14602 Hexapeptide repeat of succinyl-transferase VCSRO5_3389 PF01595 Cyclin M transmembrane N-terminal domain VCSRO5_3389 PF03471 Transporter associated domain VCSRO5_3389 PF00571 CBS domain VCSRO5_3390 PF02566 OsmC-like protein VCSRO5_3391 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO5_3392 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO5_3392 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO5_3395 PF13520 Amino acid permease VCSRO5_3396 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3398 PF04397 LytTr DNA-binding domain VCSRO5_3398 PF00072 Response regulator receiver domain VCSRO5_3399 PF07694 5TMR of 5TMR-LYT VCSRO5_3399 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3399 PF06580 Histidine kinase VCSRO5_3402 PF00005 ABC transporter VCSRO5_3402 PF02687 FtsX-like permease family VCSRO5_3402 PF12704 MacB-like periplasmic core domain VCSRO5_3403 PF00005 ABC transporter VCSRO5_3405 PF00248 Aldo/keto reductase family VCSRO5_3406 PF00128 Alpha amylase, catalytic domain VCSRO5_3407 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO5_3408 PF12262 Bacterial virulence factor lipase N-terminal VCSRO5_3409 PF13426 PAS domain VCSRO5_3409 PF08447 PAS fold VCSRO5_3409 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3410 PF01447 Thermolysin metallopeptidase, catalytic domain VCSRO5_3410 PF02868 Thermolysin metallopeptidase, alpha-helical domain VCSRO5_3410 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO5_3410 PF07504 Fungalysin/Thermolysin Propeptide Motif VCSRO5_3410 PF03413 Peptidase propeptide and YPEB domain VCSRO5_3411 PF03922 OmpW family VCSRO5_3414 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO5_3415 PF08461 Ribonuclease R winged-helix domain VCSRO5_3415 PF08206 Ribonuclease B OB domain VCSRO5_3415 PF17876 Cold shock domain VCSRO5_3415 PF00575 S1 RNA binding domain VCSRO5_3415 PF00773 RNB domain VCSRO5_3416 PF00313 'Cold-shock' DNA-binding domain VCSRO5_3418 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO5_3419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3419 PF03466 LysR substrate binding domain VCSRO5_3426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3426 PF02743 Cache domain VCSRO5_3426 PF00672 HAMP domain VCSRO5_3432 PF03787 RAMP superfamily VCSRO5_3458 PF02386 Cation transport protein VCSRO5_3459 PF02080 TrkA-C domain VCSRO5_3459 PF02254 TrkA-N domain VCSRO5_3460 PF02386 Cation transport protein VCSRO5_3461 PF00072 Response regulator receiver domain VCSRO5_3461 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_3462 PF13493 Domain of unknown function (DUF4118) VCSRO5_3462 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_3462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3462 PF02702 Osmosensitive K+ channel His kinase sensor domain VCSRO5_3463 PF03824 High-affinity nickel-transport protein VCSRO5_3464 PF02583 Metal-sensitive transcriptional repressor VCSRO5_3465 PF11798 IMS family HHH motif VCSRO5_3465 PF00817 impB/mucB/samB family VCSRO5_3465 PF11799 impB/mucB/samB family C-terminal domain VCSRO5_3465 PF13438 Domain of unknown function (DUF4113) VCSRO5_3466 PF00717 Peptidase S24-like VCSRO5_3471 PF03354 Phage Terminase VCSRO5_3475 PF01381 Helix-turn-helix VCSRO5_3475 PF00717 Peptidase S24-like VCSRO5_3478 PF00589 Phage integrase family VCSRO5_3478 PF12167 Arm DNA-binding domain VCSRO5_3479 PF01872 RibD C-terminal domain VCSRO5_3480 PF02909 Tetracyclin repressor-like, C-terminal domain VCSRO5_3480 PF00440 Bacterial regulatory proteins, tetR family VCSRO5_3481 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO5_3481 PF00107 Zinc-binding dehydrogenase VCSRO5_3482 PF00155 Aminotransferase class I and II VCSRO5_3483 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO5_3484 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3484 PF03466 LysR substrate binding domain VCSRO5_3485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO5_3490 PF01966 HD domain VCSRO5_3491 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VCSRO5_3491 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VCSRO5_3492 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VCSRO5_3493 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VCSRO5_3493 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VCSRO5_3498 PF02595 Glycerate kinase family VCSRO5_3499 PF00672 HAMP domain VCSRO5_3499 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3500 PF01243 Pyridoxamine 5'-phosphate oxidase VCSRO5_3501 PF06228 Haem utilisation ChuX/HutX VCSRO5_3502 PF04055 Radical SAM superfamily VCSRO5_3503 PF03544 Gram-negative bacterial TonB protein C-terminal VCSRO5_3504 PF01618 MotA/TolQ/ExbB proton channel family VCSRO5_3505 PF02472 Biopolymer transport protein ExbD/TolR VCSRO5_3506 PF01497 Periplasmic binding protein VCSRO5_3507 PF01032 FecCD transport family VCSRO5_3508 PF00005 ABC transporter VCSRO5_3514 PF00672 HAMP domain VCSRO5_3514 PF02743 Cache domain VCSRO5_3514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3515 PF03476 MOSC N-terminal beta barrel domain VCSRO5_3515 PF03473 MOSC domain VCSRO5_3515 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO5_3515 PF03473 MOSC domain VCSRO5_3515 PF03476 MOSC N-terminal beta barrel domain VCSRO5_3515 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO5_3516 PF01979 Amidohydrolase family VCSRO5_3518 PF05656 Protein of unknown function (DUF805) VCSRO5_3520 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO5_3521 PF05661 Protein of unknown function (DUF808) VCSRO5_3523 PF00313 'Cold-shock' DNA-binding domain VCSRO5_3528 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3528 PF08448 PAS fold VCSRO5_3529 PF08220 DeoR-like helix-turn-helix domain VCSRO5_3529 PF00455 DeoR C terminal sensor domain VCSRO5_3532 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3533 PF14785 Maltose transport system permease protein MalF P2 domain VCSRO5_3533 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3534 PF01547 Bacterial extracellular solute-binding protein VCSRO5_3535 PF08402 TOBE domain VCSRO5_3535 PF00005 ABC transporter VCSRO5_3536 PF13302 Acetyltransferase (GNAT) domain VCSRO5_3539 PF01906 Putative heavy-metal-binding VCSRO5_3540 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_3542 PF00072 Response regulator receiver domain VCSRO5_3542 PF01584 CheW-like domain VCSRO5_3543 PF01047 MarR family VCSRO5_3544 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3547 PF00563 EAL domain VCSRO5_3547 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3547 PF03707 Bacterial signalling protein N terminal repeat VCSRO5_3551 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3551 PF03466 LysR substrate binding domain VCSRO5_3552 PF00990 Diguanylate cyclase, GGDEF domain VCSRO5_3552 PF00563 EAL domain VCSRO5_3554 PF05726 Pirin C-terminal cupin domain VCSRO5_3554 PF02678 Pirin VCSRO5_3555 PF06865 Pyrimidine/purine nucleoside phosphorylase VCSRO5_3557 PF07690 Major Facilitator Superfamily VCSRO5_3559 PF12729 Four helix bundle sensory module for signal transduction VCSRO5_3559 PF00672 HAMP domain VCSRO5_3559 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3560 PF13654 AAA domain VCSRO5_3560 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO5_3562 PF00005 ABC transporter VCSRO5_3562 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_3563 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_3564 PF00672 HAMP domain VCSRO5_3564 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3564 PF17200 Single Cache domain 2 VCSRO5_3566 PF03466 LysR substrate binding domain VCSRO5_3566 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3567 PF02652 L-lactate permease VCSRO5_3568 PF01070 FMN-dependent dehydrogenase VCSRO5_3570 PF03618 Kinase/pyrophosphorylase VCSRO5_3571 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO5_3571 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VCSRO5_3571 PF00391 PEP-utilising enzyme, mobile domain VCSRO5_3572 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3572 PF08447 PAS fold VCSRO5_3573 PF01554 MatE VCSRO5_3574 PF00270 DEAD/DEAH box helicase VCSRO5_3574 PF00271 Helicase conserved C-terminal domain VCSRO5_3575 PF03466 LysR substrate binding domain VCSRO5_3575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3577 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCSRO5_3579 PF00664 ABC transporter transmembrane region VCSRO5_3579 PF00005 ABC transporter VCSRO5_3581 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCSRO5_3583 PF01810 LysE type translocator VCSRO5_3584 PF12833 Helix-turn-helix domain VCSRO5_3587 PF01557 Fumarylacetoacetate (FAA) hydrolase family VCSRO5_3588 PF01047 MarR family VCSRO5_3589 PF02566 OsmC-like protein VCSRO5_3590 PF13609 Gram-negative porin VCSRO5_3591 PF00892 EamA-like transporter family VCSRO5_3592 PF00462 Glutaredoxin VCSRO5_3593 PF07670 Nucleoside recognition VCSRO5_3594 PF07670 Nucleoside recognition VCSRO5_3595 PF03600 Citrate transporter VCSRO5_3597 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VCSRO5_3597 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VCSRO5_3598 PF06029 AlkA N-terminal domain VCSRO5_3598 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO5_3599 PF07681 DoxX VCSRO5_3600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3600 PF03466 LysR substrate binding domain VCSRO5_3604 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VCSRO5_3606 PF07148 Maltose operon periplasmic protein precursor (MalM) VCSRO5_3607 PF02264 LamB porin VCSRO5_3608 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO5_3608 PF00128 Alpha amylase, catalytic domain VCSRO5_3610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3610 PF12729 Four helix bundle sensory module for signal transduction VCSRO5_3610 PF00672 HAMP domain VCSRO5_3613 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3613 PF00672 HAMP domain VCSRO5_3615 PF00793 DAHP synthetase I family VCSRO5_3616 PF00005 ABC transporter VCSRO5_3617 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3618 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO5_3619 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO5_3620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO5_3620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO5_3620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO5_3621 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO5_3621 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO5_3621 PF02378 Phosphotransferase system, EIIC VCSRO5_3622 PF01232 Mannitol dehydrogenase Rossmann domain VCSRO5_3622 PF08125 Mannitol dehydrogenase C-terminal domain VCSRO5_3623 PF05068 Mannitol repressor VCSRO5_3624 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCSRO5_3630 PF13460 NAD(P)H-binding VCSRO5_3631 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3631 PF03466 LysR substrate binding domain VCSRO5_3632 PF02743 Cache domain VCSRO5_3632 PF00672 HAMP domain VCSRO5_3632 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3633 PF00106 short chain dehydrogenase VCSRO5_3634 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO5_3634 PF03466 LysR substrate binding domain VCSRO5_3635 PF04013 Putative SAM-dependent RNA methyltransferase VCSRO5_3636 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VCSRO5_3637 PF13520 Amino acid permease VCSRO5_3638 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VCSRO5_3638 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VCSRO5_3638 PF01276 Orn/Lys/Arg decarboxylase, major domain VCSRO5_3639 PF00171 Aldehyde dehydrogenase family VCSRO5_3640 PF01037 Lrp/AsnC ligand binding domain VCSRO5_3641 PF02743 Cache domain VCSRO5_3641 PF00672 HAMP domain VCSRO5_3641 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3643 PF00474 Sodium:solute symporter family VCSRO5_3645 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VCSRO5_3645 PF01619 Proline dehydrogenase VCSRO5_3645 PF00171 Aldehyde dehydrogenase family VCSRO5_3645 PF14850 DNA-binding domain of Proline dehydrogenase VCSRO5_3646 PF12833 Helix-turn-helix domain VCSRO5_3649 PF03781 Sulfatase-modifying factor enzyme 1 VCSRO5_3650 PF00196 Bacterial regulatory proteins, luxR family VCSRO5_3650 PF00072 Response regulator receiver domain VCSRO5_3651 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VCSRO5_3651 PF01243 Pyridoxamine 5'-phosphate oxidase VCSRO5_3652 PF00529 HlyD membrane-fusion protein of T1SS VCSRO5_3655 PF00664 ABC transporter transmembrane region VCSRO5_3655 PF00005 ABC transporter VCSRO5_3655 PF03412 Peptidase C39 family VCSRO5_3657 PF00072 Response regulator receiver domain VCSRO5_3657 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_3659 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3659 PF00672 HAMP domain VCSRO5_3659 PF02743 Cache domain VCSRO5_3660 PF00072 Response regulator receiver domain VCSRO5_3660 PF01339 CheB methylesterase VCSRO5_3661 PF03975 CheD chemotactic sensory transduction VCSRO5_3662 PF01739 CheR methyltransferase, SAM binding domain VCSRO5_3662 PF03705 CheR methyltransferase, all-alpha domain VCSRO5_3663 PF02203 Tar ligand binding domain homologue VCSRO5_3663 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO5_3663 PF00672 HAMP domain VCSRO5_3664 PF01584 CheW-like domain VCSRO5_3665 PF01584 CheW-like domain VCSRO5_3666 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3666 PF01627 Hpt domain VCSRO5_3666 PF01584 CheW-like domain VCSRO5_3666 PF09078 CheY binding VCSRO5_3666 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO5_3667 PF00072 Response regulator receiver domain VCSRO5_3669 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO5_3670 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3671 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO5_3671 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO5_3672 PF00005 ABC transporter VCSRO5_3672 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO5_3673 PF00884 Sulfatase VCSRO5_3673 PF08019 Phosphoethanolamine transferase EptA/EptB VCSRO5_3674 PF00512 His Kinase A (phospho-acceptor) domain VCSRO5_3674 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO5_3674 PF08521 Two-component sensor kinase N-terminal VCSRO5_3675 PF00486 Transcriptional regulatory protein, C terminal VCSRO5_3675 PF00072 Response regulator receiver domain VCSRO5_3679 PF00501 AMP-binding enzyme VCSRO5_3681 PF13718 GNAT acetyltransferase 2 VCSRO5_3681 PF05127 Helicase VCSRO5_3682 PF13416 Bacterial extracellular solute-binding protein VCSRO5_3683 PF08775 ParB family VCSRO5_3683 PF02195 ParB-like nuclease domain VCSRO5_3684 PF13614 AAA domain VCSRO5_3684 PF18607 ParA helix turn helix domain