locus-tag class description VCSRO45_0001 PF00258 Flavodoxin VCSRO45_0013 PF00266 Aminotransferase class-V VCSRO45_0018 PF02899 Phage integrase, N-terminal SAM-like domain VCSRO45_0018 PF00589 Phage integrase family VCSRO45_0022 PF00809 Pterin binding enzyme VCSRO45_0023 PF00893 Small Multidrug Resistance protein VCSRO45_0024 PF13427 Domain of unknown function (DUF4111) VCSRO45_0024 PF01909 Nucleotidyltransferase domain VCSRO45_0025 PF00589 Phage integrase family VCSRO45_0025 PF13495 Phage integrase, N-terminal SAM-like domain VCSRO45_0026 PF02796 Helix-turn-helix domain of resolvase VCSRO45_0026 PF00239 Resolvase, N terminal domain VCSRO45_0027 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO45_0030 PF00580 UvrD/REP helicase N-terminal domain VCSRO45_0030 PF13361 UvrD-like helicase C-terminal domain VCSRO45_0038 PF06122 Conjugative relaxosome accessory transposon protein VCSRO45_0049 PF00589 Phage integrase family VCSRO45_0049 PF02899 Phage integrase, N-terminal SAM-like domain VCSRO45_0050 PF12631 MnmE helical domain VCSRO45_0050 PF01926 50S ribosome-binding GTPase VCSRO45_0050 PF10396 GTP-binding protein TrmE N-terminus VCSRO45_0051 PF13006 Insertion element 4 transposase N-terminal VCSRO45_0051 PF01609 Transposase DDE domain VCSRO45_0052 PF14849 YidC periplasmic domain VCSRO45_0052 PF02096 60Kd inner membrane protein VCSRO45_0053 PF00825 Ribonuclease P VCSRO45_0054 PF00468 Ribosomal protein L34 VCSRO45_0055 PF00005 ABC transporter VCSRO45_0056 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_0057 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO45_0058 PF00308 Bacterial dnaA protein VCSRO45_0058 PF08299 Bacterial dnaA protein helix-turn-helix VCSRO45_0058 PF11638 DnaA N-terminal domain VCSRO45_0059 PF02767 DNA polymerase III beta subunit, central domain VCSRO45_0059 PF00712 DNA polymerase III beta subunit, N-terminal domain VCSRO45_0059 PF02768 DNA polymerase III beta subunit, C-terminal domain VCSRO45_0060 PF02463 RecF/RecN/SMC N terminal domain VCSRO45_0061 PF00204 DNA gyrase B VCSRO45_0061 PF00986 DNA gyrase B subunit, carboxyl terminus VCSRO45_0061 PF18053 DNA gyrase B subunit insert domain VCSRO45_0061 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0061 PF01751 Toprim domain VCSRO45_0064 PF00011 Hsp20/alpha crystallin family VCSRO45_0065 PF00155 Aminotransferase class I and II VCSRO45_0066 PF02092 Glycyl-tRNA synthetase beta subunit VCSRO45_0066 PF05746 DALR anticodon binding domain VCSRO45_0067 PF02091 Glycyl-tRNA synthetase alpha subunit VCSRO45_0068 PF01169 Uncharacterized protein family UPF0016 VCSRO45_0070 PF01206 Sulfurtransferase TusA VCSRO45_0072 PF00107 Zinc-binding dehydrogenase VCSRO45_0072 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO45_0073 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO45_0073 PF00585 C-terminal regulatory domain of Threonine dehydratase VCSRO45_0074 PF00920 Dehydratase family VCSRO45_0075 PF01063 Amino-transferase class IV VCSRO45_0077 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO45_0077 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO45_0077 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO45_0078 PF01078 Magnesium chelatase, subunit ChlI VCSRO45_0078 PF13335 Magnesium chelatase, subunit ChlI C-terminal VCSRO45_0079 PF01553 Acyltransferase VCSRO45_0080 PF01323 DSBA-like thioredoxin domain VCSRO45_0081 PF01636 Phosphotransferase enzyme family VCSRO45_0082 PF12801 4Fe-4S binding domain VCSRO45_0082 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VCSRO45_0082 PF13746 4Fe-4S dicluster domain VCSRO45_0083 PF06288 Protein of unknown function (DUF1040) VCSRO45_0084 PF07070 SpoOM protein VCSRO45_0085 PF03006 Haemolysin-III related VCSRO45_0087 PF02386 Cation transport protein VCSRO45_0088 PF02080 TrkA-C domain VCSRO45_0088 PF02254 TrkA-N domain VCSRO45_0089 PF01189 16S rRNA methyltransferase RsmB/F VCSRO45_0089 PF01029 NusB family VCSRO45_0090 PF02911 Formyl transferase, C-terminal domain VCSRO45_0090 PF00551 Formyl transferase VCSRO45_0091 PF01327 Polypeptide deformylase VCSRO45_0092 PF01476 LysM domain VCSRO45_0093 PF02481 DNA recombination-mediator protein A VCSRO45_0093 PF17782 DprA winged helix domain VCSRO45_0094 PF04361 Protein of unknown function (DUF494) VCSRO45_0095 PF01396 Topoisomerase DNA binding C4 zinc finger VCSRO45_0096 PF02222 ATP-grasp domain VCSRO45_0096 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VCSRO45_0097 PF00731 AIR carboxylase VCSRO45_0098 PF01300 Telomere recombination VCSRO45_0099 PF01218 Coproporphyrinogen III oxidase VCSRO45_0100 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VCSRO45_0100 PF01488 Shikimate / quinate 5-dehydrogenase VCSRO45_0100 PF08501 Shikimate dehydrogenase substrate binding domain VCSRO45_0102 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO45_0109 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VCSRO45_0110 PF13667 ThiC-associated domain VCSRO45_0110 PF01964 Radical SAM ThiC family VCSRO45_0111 PF02581 Thiamine monophosphate synthase VCSRO45_0112 PF00899 ThiF family VCSRO45_0113 PF02597 ThiS family VCSRO45_0114 PF05690 Thiazole biosynthesis protein ThiG VCSRO45_0115 PF06968 Biotin and Thiamin Synthesis associated domain VCSRO45_0115 PF04055 Radical SAM superfamily VCSRO45_0116 PF01321 Creatinase/Prolidase N-terminal domain VCSRO45_0116 PF00557 Metallopeptidase family M24 VCSRO45_0116 PF01321 Creatinase/Prolidase N-terminal domain VCSRO45_0116 PF00557 Metallopeptidase family M24 VCSRO45_0117 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_0117 PF03466 LysR substrate binding domain VCSRO45_0118 PF07690 Major Facilitator Superfamily VCSRO45_0120 PF01037 Lrp/AsnC ligand binding domain VCSRO45_0121 PF00563 EAL domain VCSRO45_0121 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_0121 PF08448 PAS fold VCSRO45_0122 PF04445 Putative SAM-dependent methyltransferase VCSRO45_0124 PF00892 EamA-like transporter family VCSRO45_0125 PF00582 Universal stress protein family VCSRO45_0126 PF00210 Ferritin-like domain VCSRO45_0127 PF10625 Universal stress protein B (UspB) VCSRO45_0129 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_0129 PF00672 HAMP domain VCSRO45_0129 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_0131 PF02646 RmuC family VCSRO45_0132 PF01209 ubiE/COQ5 methyltransferase family VCSRO45_0133 PF02036 SCP-2 sterol transfer family VCSRO45_0134 PF03109 ABC1 family VCSRO45_0135 PF02416 mttA/Hcf106 family VCSRO45_0136 PF02416 mttA/Hcf106 family VCSRO45_0137 PF00902 Sec-independent protein translocase protein (TatC) VCSRO45_0138 PF03150 Di-haem cytochrome c peroxidase VCSRO45_0138 PF00034 Cytochrome c VCSRO45_0139 PF01554 MatE VCSRO45_0141 PF01726 LexA DNA binding domain VCSRO45_0141 PF00717 Peptidase S24-like VCSRO45_0142 PF01553 Acyltransferase VCSRO45_0143 PF01040 UbiA prenyltransferase family VCSRO45_0144 PF04345 Chorismate lyase VCSRO45_0145 PF03748 Flagellar basal body-associated protein FliL VCSRO45_0146 PF00672 HAMP domain VCSRO45_0146 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_0146 PF02203 Tar ligand binding domain homologue VCSRO45_0147 PF01694 Rhomboid family VCSRO45_0147 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VCSRO45_0148 PF00581 Rhodanese-like domain VCSRO45_0149 PF01026 TatD related DNase VCSRO45_0150 PF00490 Delta-aminolevulinic acid dehydratase VCSRO45_0152 PF01612 3'-5' exonuclease VCSRO45_0152 PF01367 5'-3' exonuclease, C-terminal SAM fold VCSRO45_0152 PF00476 DNA polymerase family A VCSRO45_0152 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VCSRO45_0153 PF01926 50S ribosome-binding GTPase VCSRO45_0154 PF00034 Cytochrome c VCSRO45_0156 PF04220 Der GTPase activator (YihI) VCSRO45_0157 PF10675 Protein of unknown function (DUF2489) VCSRO45_0158 PF06969 HemN C-terminal domain VCSRO45_0158 PF04055 Radical SAM superfamily VCSRO45_0159 PF07219 HemY protein N-terminus VCSRO45_0160 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VCSRO45_0161 PF02602 Uroporphyrinogen-III synthase HemD VCSRO45_0162 PF03900 Porphobilinogen deaminase, C-terminal domain VCSRO45_0162 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VCSRO45_0163 PF12633 Adenylate cyclase NT domain VCSRO45_0163 PF01295 Adenylate cyclase, class-I VCSRO45_0164 PF01491 Frataxin-like domain VCSRO45_0165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VCSRO45_0165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VCSRO45_0166 PF01678 Diaminopimelate epimerase VCSRO45_0167 PF04340 Protein of unknown function, DUF484 VCSRO45_0168 PF00589 Phage integrase family VCSRO45_0168 PF02899 Phage integrase, N-terminal SAM-like domain VCSRO45_0169 PF13419 Haloacid dehalogenase-like hydrolase VCSRO45_0170 PF08495 FIST N domain VCSRO45_0170 PF10442 FIST C domain VCSRO45_0170 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_0170 PF00563 EAL domain VCSRO45_0175 PF12146 Serine aminopeptidase, S33 VCSRO45_0176 PF01810 LysE type translocator VCSRO45_0177 PF08668 HDOD domain VCSRO45_0177 PF00563 EAL domain VCSRO45_0178 PF00210 Ferritin-like domain VCSRO45_0185 PF00448 SRP54-type protein, GTPase domain VCSRO45_0185 PF02881 SRP54-type protein, helical bundle domain VCSRO45_0186 PF00005 ABC transporter VCSRO45_0187 PF18075 FtsX extracellular domain VCSRO45_0188 PF04545 Sigma-70, region 4 VCSRO45_0188 PF00140 Sigma-70 factor, region 1.2 VCSRO45_0188 PF04542 Sigma-70 region 2 VCSRO45_0189 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_0189 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO45_0190 PF00440 Bacterial regulatory proteins, tetR family VCSRO45_0192 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO45_0193 PF07715 TonB-dependent Receptor Plug Domain VCSRO45_0193 PF00593 TonB dependent receptor VCSRO45_0194 PF05922 Peptidase inhibitor I9 VCSRO45_0194 PF00082 Subtilase family VCSRO45_0194 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO45_0195 PF01177 Asp/Glu/Hydantoin racemase VCSRO45_0209 PF00962 Adenosine/AMP deaminase VCSRO45_0210 PF00563 EAL domain VCSRO45_0210 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_0210 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_0210 PF13188 PAS domain VCSRO45_0211 PF02954 Bacterial regulatory protein, Fis family VCSRO45_0211 PF00072 Response regulator receiver domain VCSRO45_0211 PF00158 Sigma-54 interaction domain VCSRO45_0212 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_0212 PF00989 PAS fold VCSRO45_0212 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0214 PF03951 Glutamine synthetase, beta-Grasp domain VCSRO45_0214 PF00120 Glutamine synthetase, catalytic domain VCSRO45_0216 PF00679 Elongation factor G C-terminus VCSRO45_0216 PF00009 Elongation factor Tu GTP binding domain VCSRO45_0216 PF03144 Elongation factor Tu domain 2 VCSRO45_0218 PF03631 Virulence factor BrkB VCSRO45_0219 PF02580 D-Tyr-tRNA(Tyr) deacylase VCSRO45_0220 PF00583 Acetyltransferase (GNAT) family VCSRO45_0220 PF09500 Putative thioesterase (yiiD_Cterm) VCSRO45_0222 PF01293 Phosphoenolpyruvate carboxykinase VCSRO45_0223 PF01430 Hsp33 protein VCSRO45_0224 PF01479 S4 domain VCSRO45_0225 PF11356 Type II secretion system protein C VCSRO45_0226 PF00263 Bacterial type II and III secretion system protein VCSRO45_0226 PF03958 Bacterial type II/III secretion system short domain VCSRO45_0227 PF00437 Type II/IV secretion system protein VCSRO45_0228 PF00482 Type II secretion system (T2SS), protein F VCSRO45_0229 PF07963 Prokaryotic N-terminal methylation motif VCSRO45_0229 PF08334 Type II secretion system (T2SS), protein G VCSRO45_0230 PF12019 Type II transport protein GspH VCSRO45_0231 PF07963 Prokaryotic N-terminal methylation motif VCSRO45_0231 PF02501 Type II secretion system (T2SS), protein I VCSRO45_0232 PF11612 Type II secretion system (T2SS), protein J VCSRO45_0232 PF07963 Prokaryotic N-terminal methylation motif VCSRO45_0233 PF03934 Type II secretion system (T2SS), protein K VCSRO45_0234 PF12693 GspL periplasmic domain VCSRO45_0234 PF05134 Type II secretion system (T2SS), protein L VCSRO45_0235 PF04612 Type II secretion system (T2SS), protein M VCSRO45_0236 PF01203 Type II secretion system (T2SS), protein N VCSRO45_0237 PF00459 Inositol monophosphatase family VCSRO45_0238 PF00293 NUDIX domain VCSRO45_0239 PF01521 Iron-sulphur cluster biosynthesis VCSRO45_0239 PF01106 NifU-like domain VCSRO45_0240 PF00156 Phosphoribosyl transferase domain VCSRO45_0241 PF00561 alpha/beta hydrolase fold VCSRO45_0243 PF16921 Tex protein YqgF-like domain VCSRO45_0243 PF09371 Tex-like protein N-terminal domain VCSRO45_0243 PF17674 HHH domain VCSRO45_0243 PF00575 S1 RNA binding domain VCSRO45_0244 PF03449 Transcription elongation factor, N-terminal VCSRO45_0244 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO45_0247 PF00005 ABC transporter VCSRO45_0248 PF02653 Branched-chain amino acid transport system / permease component VCSRO45_0249 PF00933 Glycosyl hydrolase family 3 N terminal domain VCSRO45_0249 PF01915 Glycosyl hydrolase family 3 C-terminal domain VCSRO45_0250 PF00704 Glycosyl hydrolases family 18 VCSRO45_0250 PF08329 Chitinase A, N-terminal domain VCSRO45_0251 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_0251 PF00072 Response regulator receiver domain VCSRO45_0252 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_0252 PF00672 HAMP domain VCSRO45_0252 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0253 PF00860 Permease family VCSRO45_0254 PF01548 Transposase VCSRO45_0254 PF02371 Transposase IS116/IS110/IS902 family VCSRO45_0255 PF17191 RecG wedge domain VCSRO45_0255 PF00271 Helicase conserved C-terminal domain VCSRO45_0255 PF00270 DEAD/DEAH box helicase VCSRO45_0256 PF13291 ACT domain VCSRO45_0256 PF04607 Region found in RelA / SpoT proteins VCSRO45_0256 PF02824 TGS domain VCSRO45_0257 PF01192 RNA polymerase Rpb6 VCSRO45_0258 PF00625 Guanylate kinase VCSRO45_0259 PF02592 Putative vitamin uptake transporter VCSRO45_0260 PF00474 Sodium:solute symporter family VCSRO45_0262 PF03471 Transporter associated domain VCSRO45_0262 PF00999 Sodium/hydrogen exchanger family VCSRO45_0262 PF02080 TrkA-C domain VCSRO45_0263 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_0263 PF00072 Response regulator receiver domain VCSRO45_0264 PF02683 Cytochrome C biogenesis protein transmembrane region VCSRO45_0264 PF11412 Disulphide bond corrector protein DsbC VCSRO45_0265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO45_0265 PF11852 Domain of unknown function (DUF3372) VCSRO45_0265 PF03714 Bacterial pullanase-associated domain VCSRO45_0265 PF18494 Pullulanase Ins domain VCSRO45_0265 PF17967 Pullulanase N2 domain VCSRO45_0266 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCSRO45_0267 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCSRO45_0268 PF10415 Fumarase C C-terminus VCSRO45_0268 PF00206 Lyase VCSRO45_0269 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_0269 PF17158 Membrane-associated sensor, integral membrane domain VCSRO45_0270 PF04186 FxsA cytoplasmic membrane protein VCSRO45_0271 PF00588 SpoU rRNA Methylase family VCSRO45_0272 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VCSRO45_0272 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VCSRO45_0273 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_0273 PF16527 Two-component sensor protein CpxA, periplasmic domain VCSRO45_0273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0273 PF00672 HAMP domain VCSRO45_0274 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_0274 PF00072 Response regulator receiver domain VCSRO45_0276 PF01545 Cation efflux family VCSRO45_0276 PF16916 Dimerisation domain of Zinc Transporter VCSRO45_0277 PF00365 Phosphofructokinase VCSRO45_0278 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VCSRO45_0279 PF06005 Cell division protein ZapB VCSRO45_0280 PF02219 Methylenetetrahydrofolate reductase VCSRO45_0281 PF03447 Homoserine dehydrogenase, NAD binding domain VCSRO45_0281 PF00742 Homoserine dehydrogenase VCSRO45_0281 PF00696 Amino acid kinase family VCSRO45_0282 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO45_0283 PF01340 Met Apo-repressor, MetJ VCSRO45_0284 PF00390 Malic enzyme, N-terminal domain VCSRO45_0284 PF03949 Malic enzyme, NAD binding domain VCSRO45_0285 PF01197 Ribosomal protein L31 VCSRO45_0286 PF00270 DEAD/DEAH box helicase VCSRO45_0286 PF00271 Helicase conserved C-terminal domain VCSRO45_0286 PF17764 3′ DNA-binding domain (3′BD) VCSRO45_0286 PF18074 Primosomal protein N C-terminal domain VCSRO45_0286 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VCSRO45_0287 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_0288 PF05036 Sporulation related domain VCSRO45_0289 PF00227 Proteasome subunit VCSRO45_0290 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO45_0290 PF07724 AAA domain (Cdc48 subfamily) VCSRO45_0290 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO45_0291 PF01040 UbiA prenyltransferase family VCSRO45_0292 PF03737 Aldolase/RraA VCSRO45_0293 PF01554 MatE VCSRO45_0294 PF00121 Triosephosphate isomerase VCSRO45_0298 PF08220 DeoR-like helix-turn-helix domain VCSRO45_0298 PF00455 DeoR C terminal sensor domain VCSRO45_0299 PF00166 Chaperonin 10 Kd subunit VCSRO45_0300 PF00118 TCP-1/cpn60 chaperonin family VCSRO45_0302 PF04055 Radical SAM superfamily VCSRO45_0303 PF08207 Elongation factor P (EF-P) KOW-like domain VCSRO45_0303 PF09285 Elongation factor P, C-terminal VCSRO45_0303 PF01132 Elongation factor P (EF-P) OB domain VCSRO45_0304 PF02313 Fumarate reductase subunit D VCSRO45_0305 PF02300 Fumarate reductase subunit C VCSRO45_0306 PF13183 4Fe-4S dicluster domain VCSRO45_0306 PF13085 2Fe-2S iron-sulfur cluster binding domain VCSRO45_0307 PF02910 Fumarate reductase flavoprotein C-term VCSRO45_0307 PF00890 FAD binding domain VCSRO45_0308 PF00152 tRNA synthetases class II (D, K and N) VCSRO45_0309 PF00581 Rhodanese-like domain VCSRO45_0310 PF02556 Preprotein translocase subunit SecB VCSRO45_0311 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VCSRO45_0311 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VCSRO45_0312 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO45_0312 PF06426 Serine acetyltransferase, N-terminal VCSRO45_0314 PF00311 Phosphoenolpyruvate carboxylase VCSRO45_0315 PF07687 Peptidase dimerisation domain VCSRO45_0315 PF01546 Peptidase family M20/M25/M40 VCSRO45_0316 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO45_0316 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO45_0317 PF00696 Amino acid kinase family VCSRO45_0318 PF00764 Arginosuccinate synthase VCSRO45_0319 PF00206 Lyase VCSRO45_0319 PF14698 Argininosuccinate lyase C-terminal VCSRO45_0321 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO45_0321 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_0322 PF00462 Glutaredoxin VCSRO45_0322 PF08534 Redoxin VCSRO45_0323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_0323 PF03466 LysR substrate binding domain VCSRO45_0324 PF17092 Penicillin-binding protein OB-like domain VCSRO45_0324 PF00912 Transglycosylase VCSRO45_0324 PF00905 Penicillin binding protein transpeptidase domain VCSRO45_0328 PF04351 Pilus assembly protein, PilP VCSRO45_0329 PF11741 AMIN domain VCSRO45_0329 PF00263 Bacterial type II and III secretion system protein VCSRO45_0329 PF03958 Bacterial type II/III secretion system short domain VCSRO45_0329 PF07660 Secretin and TonB N terminus short domain VCSRO45_0330 PF01202 Shikimate kinase VCSRO45_0331 PF01761 3-dehydroquinate synthase VCSRO45_0333 PF02086 D12 class N6 adenine-specific DNA methyltransferase VCSRO45_0334 PF00834 Ribulose-phosphate 3 epimerase family VCSRO45_0335 PF13419 Haloacid dehalogenase-like hydrolase VCSRO45_0336 PF00579 tRNA synthetases class I (W and Y) VCSRO45_0339 PF04055 Radical SAM superfamily VCSRO45_0339 PF00919 Uncharacterized protein family UPF0004 VCSRO45_0339 PF18693 TRAM domain VCSRO45_0340 PF00117 Glutamine amidotransferase class-I VCSRO45_0341 PF00202 Aminotransferase class-III VCSRO45_0342 PF04958 Arginine N-succinyltransferase beta subunit VCSRO45_0343 PF00171 Aldehyde dehydrogenase family VCSRO45_0346 PF13276 HTH-like domain VCSRO45_0346 PF00665 Integrase core domain VCSRO45_0346 PF13333 Integrase core domain VCSRO45_0347 PF00027 Cyclic nucleotide-binding domain VCSRO45_0347 PF13545 Crp-like helix-turn-helix domain VCSRO45_0348 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO45_0349 PF06794 Uncharacterised protein family (UPF0270) VCSRO45_0350 PF00561 alpha/beta hydrolase fold VCSRO45_0352 PF00005 ABC transporter VCSRO45_0352 PF12848 ABC transporter VCSRO45_0353 PF02525 Flavodoxin-like fold VCSRO45_0354 PF00999 Sodium/hydrogen exchanger family VCSRO45_0354 PF02254 TrkA-N domain VCSRO45_0356 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO45_0357 PF01112 Asparaginase VCSRO45_0358 PF00709 Adenylosuccinate synthetase VCSRO45_0359 PF08238 Sel1 repeat VCSRO45_0360 PF11893 Domain of unknown function (DUF3413) VCSRO45_0360 PF00884 Sulfatase VCSRO45_0361 PF00773 RNB domain VCSRO45_0361 PF17876 Cold shock domain VCSRO45_0361 PF08461 Ribonuclease R winged-helix domain VCSRO45_0361 PF08206 Ribonuclease B OB domain VCSRO45_0361 PF00575 S1 RNA binding domain VCSRO45_0362 PF00588 SpoU rRNA Methylase family VCSRO45_0362 PF08032 RNA 2'-O ribose methyltransferase substrate binding VCSRO45_0363 PF00338 Ribosomal protein S10p/S20e VCSRO45_0364 PF00297 Ribosomal protein L3 VCSRO45_0365 PF00573 Ribosomal protein L4/L1 family VCSRO45_0366 PF00276 Ribosomal protein L23 VCSRO45_0367 PF00181 Ribosomal Proteins L2, RNA binding domain VCSRO45_0367 PF03947 Ribosomal Proteins L2, C-terminal domain VCSRO45_0368 PF00203 Ribosomal protein S19 VCSRO45_0369 PF00237 Ribosomal protein L22p/L17e VCSRO45_0370 PF07650 KH domain VCSRO45_0370 PF00189 Ribosomal protein S3, C-terminal domain VCSRO45_0371 PF00252 Ribosomal protein L16p/L10e VCSRO45_0372 PF00831 Ribosomal L29 protein VCSRO45_0373 PF00366 Ribosomal protein S17 VCSRO45_0374 PF00238 Ribosomal protein L14p/L23e VCSRO45_0375 PF00467 KOW motif VCSRO45_0375 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VCSRO45_0376 PF00673 ribosomal L5P family C-terminus VCSRO45_0376 PF00281 Ribosomal protein L5 VCSRO45_0377 PF00253 Ribosomal protein S14p/S29e VCSRO45_0378 PF00410 Ribosomal protein S8 VCSRO45_0379 PF00347 Ribosomal protein L6 VCSRO45_0380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VCSRO45_0381 PF03719 Ribosomal protein S5, C-terminal domain VCSRO45_0381 PF00333 Ribosomal protein S5, N-terminal domain VCSRO45_0382 PF00327 Ribosomal protein L30p/L7e VCSRO45_0383 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VCSRO45_0384 PF00344 SecY translocase VCSRO45_0385 PF00444 Ribosomal protein L36 VCSRO45_0386 PF00416 Ribosomal protein S13/S18 VCSRO45_0387 PF00411 Ribosomal protein S11 VCSRO45_0388 PF00163 Ribosomal protein S4/S9 N-terminal domain VCSRO45_0388 PF01479 S4 domain VCSRO45_0389 PF01000 RNA polymerase Rpb3/RpoA insert domain VCSRO45_0389 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VCSRO45_0389 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VCSRO45_0390 PF01196 Ribosomal protein L17 VCSRO45_0392 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO45_0392 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO45_0393 PF04225 Opacity-associated protein A LysM-like domain VCSRO45_0393 PF08525 Opacity-associated protein A N-terminal motif VCSRO45_0394 PF00892 EamA-like transporter family VCSRO45_0395 PF13673 Acetyltransferase (GNAT) domain VCSRO45_0396 PF03880 DbpA RNA binding domain VCSRO45_0396 PF00270 DEAD/DEAH box helicase VCSRO45_0396 PF00271 Helicase conserved C-terminal domain VCSRO45_0398 PF02872 5'-nucleotidase, C-terminal domain VCSRO45_0398 PF00149 Calcineurin-like phosphoesterase VCSRO45_0399 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO45_0399 PF14824 Sirohaem biosynthesis protein central VCSRO45_0399 PF10414 Sirohaem synthase dimerisation region VCSRO45_0400 PF01507 Phosphoadenosine phosphosulfate reductase family VCSRO45_0401 PF00009 Elongation factor Tu GTP binding domain VCSRO45_0406 PF00005 ABC transporter VCSRO45_0406 PF12704 MacB-like periplasmic core domain VCSRO45_0406 PF02687 FtsX-like permease family VCSRO45_0408 PF10795 Protein of unknown function (DUF2607) VCSRO45_0409 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VCSRO45_0410 PF01625 Peptide methionine sulfoxide reductase VCSRO45_0411 PF01103 Surface antigen VCSRO45_0411 PF07244 Surface antigen variable number repeat VCSRO45_0411 PF17243 POTRA domain TamA domain 1 VCSRO45_0412 PF04357 TamB, inner membrane protein subunit of TAM complex VCSRO45_0413 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VCSRO45_0414 PF00719 Inorganic pyrophosphatase VCSRO45_0415 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VCSRO45_0416 PF01225 Mur ligase family, catalytic domain VCSRO45_0416 PF02875 Mur ligase family, glutamate ligase domain VCSRO45_0416 PF08245 Mur ligase middle domain VCSRO45_0417 PF02441 Flavoprotein VCSRO45_0419 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_0420 PF00005 ABC transporter VCSRO45_0421 PF04751 Protein of unknown function (DUF615) VCSRO45_0422 PF01523 Putative modulator of DNA gyrase VCSRO45_0423 PF03448 MgtE intracellular N domain VCSRO45_0423 PF00571 CBS domain VCSRO45_0423 PF01769 Divalent cation transporter VCSRO45_0424 PF00381 PTS HPr component phosphorylation site VCSRO45_0425 PF03668 P-loop ATPase protein family VCSRO45_0426 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO45_0427 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VCSRO45_0428 PF00309 Sigma-54 factor, Activator interacting domain (AID) VCSRO45_0428 PF04963 Sigma-54 factor, core binding domain VCSRO45_0428 PF04552 Sigma-54, DNA binding domain VCSRO45_0429 PF00005 ABC transporter VCSRO45_0429 PF12399 Branched-chain amino acid ATP-binding cassette transporter VCSRO45_0430 PF03968 OstA-like protein VCSRO45_0433 PF00571 CBS domain VCSRO45_0433 PF01380 SIS domain VCSRO45_0434 PF01699 Sodium/calcium exchanger protein VCSRO45_0435 PF00005 ABC transporter VCSRO45_0436 PF02405 Permease MlaE VCSRO45_0437 PF02470 MlaD protein VCSRO45_0438 PF05494 MlaC protein VCSRO45_0440 PF01722 BolA-like protein VCSRO45_0441 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VCSRO45_0442 PF01553 Acyltransferase VCSRO45_0443 PF01042 Endoribonuclease L-PSP VCSRO45_0444 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VCSRO45_0444 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VCSRO45_0445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCSRO45_0445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCSRO45_0446 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCSRO45_0446 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCSRO45_0447 PF13638 PIN domain VCSRO45_0447 PF02562 PhoH-like protein VCSRO45_0448 PF00271 Helicase conserved C-terminal domain VCSRO45_0448 PF12137 RNA polymerase recycling family C-terminal VCSRO45_0448 PF18339 RapA N-terminal Tudor like domain 1 VCSRO45_0448 PF18337 RapA N-terminal Tudor like domain VCSRO45_0448 PF00176 SNF2 family N-terminal domain VCSRO45_0449 PF00849 RNA pseudouridylate synthase VCSRO45_0450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO45_0450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO45_0451 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO45_0451 PF10458 Valyl tRNA synthetase tRNA binding arm VCSRO45_0451 PF08264 Anticodon-binding domain of tRNA VCSRO45_0452 PF04364 DNA polymerase III chi subunit, HolC VCSRO45_0453 PF00883 Cytosol aminopeptidase family, catalytic domain VCSRO45_0453 PF02789 Cytosol aminopeptidase family, N-terminal domain VCSRO45_0454 PF03739 Lipopolysaccharide export system permease LptF/LptG VCSRO45_0455 PF03739 Lipopolysaccharide export system permease LptF/LptG VCSRO45_0458 PF00072 Response regulator receiver domain VCSRO45_0467 PF00694 Aconitase C-terminal domain VCSRO45_0468 PF00330 Aconitase family (aconitate hydratase) VCSRO45_0469 PF00180 Isocitrate/isopropylmalate dehydrogenase VCSRO45_0470 PF00682 HMGL-like VCSRO45_0470 PF08502 LeuA allosteric (dimerisation) domain VCSRO45_0472 PF01569 PAP2 superfamily VCSRO45_0474 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_0474 PF03466 LysR substrate binding domain VCSRO45_0475 PF00501 AMP-binding enzyme VCSRO45_0476 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO45_0476 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO45_0476 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO45_0477 PF10369 Small subunit of acetolactate synthase VCSRO45_0478 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO45_0478 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO45_0478 PF01842 ACT domain VCSRO45_0479 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VCSRO45_0480 PF01812 5-formyltetrahydrofolate cyclo-ligase family VCSRO45_0481 PF05164 Cell division protein ZapA VCSRO45_0482 PF03695 Uncharacterised protein family (UPF0149) VCSRO45_0483 PF01494 FAD binding domain VCSRO45_0484 PF01494 FAD binding domain VCSRO45_0487 PF03937 Flavinator of succinate dehydrogenase VCSRO45_0489 PF00890 FAD binding domain VCSRO45_0489 PF02910 Fumarate reductase flavoprotein C-term VCSRO45_0490 PF08281 Sigma-70, region 4 VCSRO45_0490 PF04542 Sigma-70 region 2 VCSRO45_0491 PF03873 Anti sigma-E protein RseA, C-terminal domain VCSRO45_0491 PF03872 Anti sigma-E protein RseA, N-terminal domain VCSRO45_0492 PF17188 MucB/RseB C-terminal domain VCSRO45_0492 PF03888 MucB/RseB N-terminal domain VCSRO45_0494 PF00679 Elongation factor G C-terminus VCSRO45_0494 PF00009 Elongation factor Tu GTP binding domain VCSRO45_0494 PF03144 Elongation factor Tu domain 2 VCSRO45_0494 PF06421 GTP-binding protein LepA C-terminus VCSRO45_0495 PF10502 Signal peptidase, peptidase S26 VCSRO45_0496 PF00035 Double-stranded RNA binding motif VCSRO45_0496 PF14622 Ribonuclease-III-like VCSRO45_0497 PF07650 KH domain VCSRO45_0497 PF01926 50S ribosome-binding GTPase VCSRO45_0498 PF02565 Recombination protein O C terminal VCSRO45_0498 PF11967 Recombination protein O N terminal VCSRO45_0499 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VCSRO45_0500 PF01648 4'-phosphopantetheinyl transferase superfamily VCSRO45_0504 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_0504 PF00563 EAL domain VCSRO45_0505 PF00672 HAMP domain VCSRO45_0505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0505 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_0505 PF01627 Hpt domain VCSRO45_0505 PF00072 Response regulator receiver domain VCSRO45_0505 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VCSRO45_0506 PF01938 TRAM domain VCSRO45_0506 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO45_0507 PF02824 TGS domain VCSRO45_0507 PF13291 ACT domain VCSRO45_0507 PF04607 Region found in RelA / SpoT proteins VCSRO45_0508 PF03819 MazG nucleotide pyrophosphohydrolase domain VCSRO45_0509 PF06418 CTP synthase N-terminus VCSRO45_0509 PF00117 Glutamine amidotransferase class-I VCSRO45_0510 PF00113 Enolase, C-terminal TIM barrel domain VCSRO45_0510 PF03952 Enolase, N-terminal domain VCSRO45_0511 PF01743 Poly A polymerase head domain VCSRO45_0511 PF12627 Probable RNA and SrmB- binding site of polymerase A VCSRO45_0511 PF01966 HD domain VCSRO45_0512 PF01471 Putative peptidoglycan binding domain VCSRO45_0512 PF13401 AAA domain VCSRO45_0514 PF08239 Bacterial SH3 domain VCSRO45_0515 PF01384 Phosphate transporter family VCSRO45_0516 PF01865 Protein of unknown function DUF47 VCSRO45_0517 PF01928 CYTH domain VCSRO45_0519 PF00672 HAMP domain VCSRO45_0519 PF02743 Cache domain VCSRO45_0519 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_0520 PF03710 Glutamate-ammonia ligase adenylyltransferase VCSRO45_0520 PF08335 GlnD PII-uridylyltransferase VCSRO45_0521 PF01467 Cytidylyltransferase-like VCSRO45_0521 PF00294 pfkB family carbohydrate kinase VCSRO45_0522 PF02321 Outer membrane efflux protein VCSRO45_0523 PF00293 NUDIX domain VCSRO45_0524 PF06853 Protein of unknown function (DUF1249) VCSRO45_0525 PF00149 Calcineurin-like phosphoesterase VCSRO45_0526 PF05728 Uncharacterised protein family (UPF0227) VCSRO45_0527 PF00204 DNA gyrase B VCSRO45_0527 PF00986 DNA gyrase B subunit, carboxyl terminus VCSRO45_0527 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0527 PF01751 Toprim domain VCSRO45_0528 PF00521 DNA gyrase/topoisomerase IV, subunit A VCSRO45_0528 PF03989 DNA gyrase C-terminal domain, beta-propeller VCSRO45_0529 PF03884 DNA gyrase inhibitor YacG VCSRO45_0530 PF07072 Cell division protein VCSRO45_0531 PF01121 Dephospho-CoA kinase VCSRO45_0532 PF01478 Type IV leader peptidase family VCSRO45_0532 PF06750 Bacterial Peptidase A24 N-terminal domain VCSRO45_0533 PF00482 Type II secretion system (T2SS), protein F VCSRO45_0534 PF00437 Type II/IV secretion system protein VCSRO45_0534 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VCSRO45_0535 PF07963 Prokaryotic N-terminal methylation motif VCSRO45_0536 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VCSRO45_0536 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VCSRO45_0537 PF01510 N-acetylmuramoyl-L-alanine amidase VCSRO45_0538 PF00258 Flavodoxin VCSRO45_0539 PF02899 Phage integrase, N-terminal SAM-like domain VCSRO45_0539 PF00589 Phage integrase family VCSRO45_0540 PF10411 Disulfide bond isomerase protein N-terminus VCSRO45_0540 PF13098 Thioredoxin-like domain VCSRO45_0541 PF17768 RecJ OB domain VCSRO45_0541 PF02272 DHHA1 domain VCSRO45_0541 PF01368 DHH family VCSRO45_0542 PF02872 5'-nucleotidase, C-terminal domain VCSRO45_0542 PF00149 Calcineurin-like phosphoesterase VCSRO45_0543 PF00392 Bacterial regulatory proteins, gntR family VCSRO45_0543 PF07729 FCD domain VCSRO45_0544 PF17831 Pyruvate dehydrogenase E1 component middle domain VCSRO45_0544 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO45_0545 PF02817 e3 binding domain VCSRO45_0545 PF00364 Biotin-requiring enzyme VCSRO45_0545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VCSRO45_0546 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO45_0546 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_0547 PF01795 MraW methylase family VCSRO45_0548 PF04999 Cell division protein FtsL VCSRO45_0549 PF03717 Penicillin-binding Protein dimerisation domain VCSRO45_0549 PF00905 Penicillin binding protein transpeptidase domain VCSRO45_0550 PF01225 Mur ligase family, catalytic domain VCSRO45_0550 PF02875 Mur ligase family, glutamate ligase domain VCSRO45_0550 PF08245 Mur ligase middle domain VCSRO45_0551 PF08245 Mur ligase middle domain VCSRO45_0551 PF01225 Mur ligase family, catalytic domain VCSRO45_0551 PF02875 Mur ligase family, glutamate ligase domain VCSRO45_0552 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VCSRO45_0552 PF00953 Glycosyl transferase family 4 VCSRO45_0553 PF08245 Mur ligase middle domain VCSRO45_0553 PF02875 Mur ligase family, glutamate ligase domain VCSRO45_0554 PF01098 Cell cycle protein VCSRO45_0555 PF04101 Glycosyltransferase family 28 C-terminal domain VCSRO45_0555 PF03033 Glycosyltransferase family 28 N-terminal domain VCSRO45_0556 PF01225 Mur ligase family, catalytic domain VCSRO45_0556 PF02875 Mur ligase family, glutamate ligase domain VCSRO45_0556 PF08245 Mur ligase middle domain VCSRO45_0557 PF03799 Cell division protein FtsQ VCSRO45_0557 PF08478 POTRA domain, FtsQ-type VCSRO45_0558 PF02491 SHS2 domain inserted in FTSA VCSRO45_0559 PF00091 Tubulin/FtsZ family, GTPase domain VCSRO45_0559 PF12327 FtsZ family, C-terminal domain VCSRO45_0560 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VCSRO45_0562 PF02810 SEC-C motif VCSRO45_0562 PF07517 SecA DEAD-like domain VCSRO45_0562 PF01043 SecA preprotein cross-linking domain VCSRO45_0562 PF07516 SecA Wing and Scaffold domain VCSRO45_0563 PF00293 NUDIX domain VCSRO45_0564 PF05173 Dihydrodipicolinate reductase, C-terminus VCSRO45_0564 PF01113 Dihydrodipicolinate reductase, N-terminus VCSRO45_0565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VCSRO45_0565 PF00117 Glutamine amidotransferase class-I VCSRO45_0566 PF02142 MGS-like domain VCSRO45_0566 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VCSRO45_0566 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VCSRO45_0569 PF01925 Sulfite exporter TauE/SafE VCSRO45_0570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_0570 PF03466 LysR substrate binding domain VCSRO45_0571 PF03458 UPF0126 domain VCSRO45_0572 PF01497 Periplasmic binding protein VCSRO45_0574 PF01048 Phosphorylase superfamily VCSRO45_0576 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VCSRO45_0576 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_0577 PF00310 Glutamine amidotransferases class-II VCSRO45_0577 PF04898 Glutamate synthase central domain VCSRO45_0577 PF01645 Conserved region in glutamate synthase VCSRO45_0577 PF01493 GXGXG motif VCSRO45_0578 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VCSRO45_0578 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_0579 PF01493 GXGXG motif VCSRO45_0579 PF01645 Conserved region in glutamate synthase VCSRO45_0579 PF04898 Glutamate synthase central domain VCSRO45_0579 PF00310 Glutamine amidotransferases class-II VCSRO45_0580 PF16199 Radical_SAM C-terminal domain VCSRO45_0580 PF04055 Radical SAM superfamily VCSRO45_0581 PF01590 GAF domain VCSRO45_0581 PF00563 EAL domain VCSRO45_0581 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_0581 PF00360 Phytochrome region VCSRO45_0582 PF00072 Response regulator receiver domain VCSRO45_0582 PF00989 PAS fold VCSRO45_0582 PF01627 Hpt domain VCSRO45_0582 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0582 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_0582 PF18415 Histidine kinase receptor ArcB trans-membrane domain VCSRO45_0583 PF00072 Response regulator receiver domain VCSRO45_0583 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_0585 PF03737 Aldolase/RraA VCSRO45_0587 PF03447 Homoserine dehydrogenase, NAD binding domain VCSRO45_0587 PF00696 Amino acid kinase family VCSRO45_0587 PF01842 ACT domain VCSRO45_0587 PF13840 ACT domain VCSRO45_0587 PF00742 Homoserine dehydrogenase VCSRO45_0588 PF08544 GHMP kinases C terminal VCSRO45_0588 PF00288 GHMP kinases N terminal domain VCSRO45_0589 PF14821 Threonine synthase N terminus VCSRO45_0589 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO45_0590 PF01228 Glycine radical VCSRO45_0591 PF01261 Xylose isomerase-like TIM barrel VCSRO45_0592 PF03167 Uracil DNA glycosylase superfamily VCSRO45_0595 PF01235 Sodium:alanine symporter family VCSRO45_0596 PF03883 Peroxide stress protein YaaA VCSRO45_0598 PF01026 TatD related DNase VCSRO45_0599 PF07670 Nucleoside recognition VCSRO45_0599 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO45_0599 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO45_0600 PF01791 DeoC/LacD family aldolase VCSRO45_0601 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VCSRO45_0601 PF02885 Glycosyl transferase family, helical bundle domain VCSRO45_0601 PF00591 Glycosyl transferase family, a/b domain VCSRO45_0602 PF01676 Metalloenzyme superfamily VCSRO45_0603 PF01048 Phosphorylase superfamily VCSRO45_0604 PF13006 Insertion element 4 transposase N-terminal VCSRO45_0604 PF01609 Transposase DDE domain VCSRO45_0606 PF18429 Domain of unknown function (DUF5609) VCSRO45_0608 PF18073 Rubredoxin metal binding domain VCSRO45_0609 PF00009 Elongation factor Tu GTP binding domain VCSRO45_0609 PF00679 Elongation factor G C-terminus VCSRO45_0609 PF14492 Elongation Factor G, domain II VCSRO45_0609 PF03764 Elongation factor G, domain IV VCSRO45_0609 PF03144 Elongation factor Tu domain 2 VCSRO45_0610 PF00501 AMP-binding enzyme VCSRO45_0611 PF00072 Response regulator receiver domain VCSRO45_0613 PF02929 Beta galactosidase small chain VCSRO45_0613 PF16353 Domain of unknown function(DUF4981) VCSRO45_0613 PF02837 Glycosyl hydrolases family 2, sugar binding domain VCSRO45_0613 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VCSRO45_0613 PF00703 Glycosyl hydrolases family 2 VCSRO45_0614 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_0615 PF01588 Putative tRNA binding domain VCSRO45_0617 PF01544 CorA-like Mg2+ transporter protein VCSRO45_0618 PF08443 RimK-like ATP-grasp domain VCSRO45_0618 PF02080 TrkA-C domain VCSRO45_0618 PF18030 RimK PreATP-grasp domain VCSRO45_0620 PF00583 Acetyltransferase (GNAT) family VCSRO45_0622 PF14602 Hexapeptide repeat of succinyl-transferase VCSRO45_0622 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VCSRO45_0623 PF07130 YebG protein VCSRO45_0626 PF17946 RecC C-terminal domain VCSRO45_0627 PF12705 PD-(D/E)XK nuclease superfamily VCSRO45_0627 PF00580 UvrD/REP helicase N-terminal domain VCSRO45_0627 PF13361 UvrD-like helicase C-terminal domain VCSRO45_0628 PF13538 UvrD-like helicase C-terminal domain VCSRO45_0630 PF00696 Amino acid kinase family VCSRO45_0630 PF00583 Acetyltransferase (GNAT) family VCSRO45_0632 PF06725 3D domain VCSRO45_0632 PF03562 MltA specific insert domain VCSRO45_0633 PF00899 ThiF family VCSRO45_0634 PF02657 Fe-S metabolism associated domain VCSRO45_0635 PF00266 Aminotransferase class-V VCSRO45_0636 PF01965 DJ-1/PfpI family VCSRO45_0637 PF08546 Ketopantoate reductase PanE/ApbA C terminal VCSRO45_0637 PF02558 Ketopantoate reductase PanE/ApbA VCSRO45_0638 PF03502 Nucleoside-specific channel-forming protein, Tsx VCSRO45_0640 PF04542 Sigma-70 region 2 VCSRO45_0640 PF04545 Sigma-70, region 4 VCSRO45_0642 PF07690 Major Facilitator Superfamily VCSRO45_0643 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VCSRO45_0645 PF05175 Methyltransferase small domain VCSRO45_0646 PF01722 BolA-like protein VCSRO45_0647 PF11973 NQRA C-terminal domain VCSRO45_0647 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VCSRO45_0648 PF03116 NQR2, RnfD, RnfE family VCSRO45_0649 PF04205 FMN-binding domain VCSRO45_0650 PF02508 Rnf-Nqr subunit, membrane protein VCSRO45_0651 PF02508 Rnf-Nqr subunit, membrane protein VCSRO45_0652 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO45_0652 PF00175 Oxidoreductase NAD-binding domain VCSRO45_0652 PF00970 Oxidoreductase FAD-binding domain VCSRO45_0653 PF02424 ApbE family VCSRO45_0655 PF00817 impB/mucB/samB family VCSRO45_0655 PF11798 IMS family HHH motif VCSRO45_0657 PF17158 Membrane-associated sensor, integral membrane domain VCSRO45_0657 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_0658 PF00209 Sodium:neurotransmitter symporter family VCSRO45_0660 PF08443 RimK-like ATP-grasp domain VCSRO45_0660 PF18030 RimK PreATP-grasp domain VCSRO45_0661 PF08443 RimK-like ATP-grasp domain VCSRO45_0661 PF18030 RimK PreATP-grasp domain VCSRO45_0662 PF07687 Peptidase dimerisation domain VCSRO45_0662 PF01546 Peptidase family M20/M25/M40 VCSRO45_0663 PF00860 Permease family VCSRO45_0664 PF00156 Phosphoribosyl transferase domain VCSRO45_0665 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VCSRO45_0666 PF07417 Sigma factor-binding transcriptional regulator Crl VCSRO45_0667 PF00696 Amino acid kinase family VCSRO45_0667 PF01472 PUA domain VCSRO45_0668 PF00171 Aldehyde dehydrogenase family VCSRO45_0669 PF03477 ATP cone domain VCSRO45_0670 PF01872 RibD C-terminal domain VCSRO45_0670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO45_0671 PF00677 Lumazine binding domain VCSRO45_0672 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VCSRO45_0672 PF00925 GTP cyclohydrolase II VCSRO45_0673 PF00885 6,7-dimethyl-8-ribityllumazine synthase VCSRO45_0674 PF01029 NusB family VCSRO45_0675 PF02769 AIR synthase related protein, C-terminal domain VCSRO45_0675 PF00586 AIR synthase related protein, N-terminal domain VCSRO45_0676 PF04608 Phosphatidylglycerophosphatase A VCSRO45_0677 PF11944 Protein of unknown function (DUF3461) VCSRO45_0678 PF08335 GlnD PII-uridylyltransferase VCSRO45_0678 PF01966 HD domain VCSRO45_0678 PF01909 Nucleotidyltransferase domain VCSRO45_0679 PF00557 Metallopeptidase family M24 VCSRO45_0680 PF00318 Ribosomal protein S2 VCSRO45_0681 PF00889 Elongation factor TS VCSRO45_0682 PF00696 Amino acid kinase family VCSRO45_0683 PF01765 Ribosome recycling factor VCSRO45_0684 PF01255 Putative undecaprenyl diphosphate synthase VCSRO45_0686 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VCSRO45_0686 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VCSRO45_0686 PF13288 DXP reductoisomerase C-terminal domain VCSRO45_0687 PF17820 PDZ domain VCSRO45_0687 PF02163 Peptidase family M50 VCSRO45_0688 PF07244 Surface antigen variable number repeat VCSRO45_0688 PF01103 Surface antigen VCSRO45_0689 PF03938 Outer membrane protein (OmpH-like) VCSRO45_0690 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO45_0690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VCSRO45_0691 PF07977 FabA-like domain VCSRO45_0692 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO45_0692 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VCSRO45_0693 PF02684 Lipid-A-disaccharide synthetase VCSRO45_0694 PF01351 Ribonuclease HII VCSRO45_0695 PF07733 Bacterial DNA polymerase III alpha NTPase domain VCSRO45_0695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VCSRO45_0695 PF14579 Helix-hairpin-helix motif VCSRO45_0695 PF01336 OB-fold nucleic acid binding domain VCSRO45_0695 PF02811 PHP domain VCSRO45_0696 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VCSRO45_0697 PF01171 PP-loop family VCSRO45_0697 PF09179 TilS substrate binding domain VCSRO45_0697 PF11734 TilS substrate C-terminal domain VCSRO45_0698 PF00034 Cytochrome c VCSRO45_0699 PF05870 Phenolic acid decarboxylase (PAD) VCSRO45_0700 PF00543 Nitrogen regulatory protein P-II VCSRO45_0701 PF03372 Endonuclease/Exonuclease/phosphatase family VCSRO45_0702 PF01476 LysM domain VCSRO45_0702 PF01464 Transglycosylase SLT domain VCSRO45_0703 PF16123 Hydroxyacylglutathione hydrolase C-terminus VCSRO45_0703 PF00753 Metallo-beta-lactamase superfamily VCSRO45_0704 PF08241 Methyltransferase domain VCSRO45_0705 PF00075 RNase H VCSRO45_0706 PF00929 Exonuclease VCSRO45_0708 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCSRO45_0708 PF02770 Acyl-CoA dehydrogenase, middle domain VCSRO45_0708 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCSRO45_0708 PF09317 Domain of unknown function (DUF1974) VCSRO45_0709 PF09317 Domain of unknown function (DUF1974) VCSRO45_0709 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCSRO45_0709 PF02770 Acyl-CoA dehydrogenase, middle domain VCSRO45_0709 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCSRO45_0710 PF13580 SIS domain VCSRO45_0711 PF13230 Glutamine amidotransferases class-II VCSRO45_0712 PF00551 Formyl transferase VCSRO45_0713 PF00586 AIR synthase related protein, N-terminal domain VCSRO45_0713 PF02769 AIR synthase related protein, C-terminal domain VCSRO45_0715 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_0716 PF01479 S4 domain VCSRO45_0716 PF00849 RNA pseudouridylate synthase VCSRO45_0717 PF01713 Smr domain VCSRO45_0721 PF03173 Putative carbohydrate binding domain VCSRO45_0721 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VCSRO45_0721 PF00728 Glycosyl hydrolase family 20, catalytic domain VCSRO45_0721 PF02838 Glycosyl hydrolase family 20, domain 2 VCSRO45_0723 PF00403 Heavy-metal-associated domain VCSRO45_0724 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO45_0725 PF00691 OmpA family VCSRO45_0725 PF01389 OmpA-like transmembrane domain VCSRO45_0727 PF07715 TonB-dependent Receptor Plug Domain VCSRO45_0728 PF04954 Siderophore-interacting protein VCSRO45_0728 PF08021 Siderophore-interacting FAD-binding domain VCSRO45_0729 PF08242 Methyltransferase domain VCSRO45_0729 PF00501 AMP-binding enzyme VCSRO45_0729 PF00668 Condensation domain VCSRO45_0729 PF00550 Phosphopantetheine attachment site VCSRO45_0736 PF00072 Response regulator receiver domain VCSRO45_0736 PF01584 CheW-like domain VCSRO45_0737 PF01739 CheR methyltransferase, SAM binding domain VCSRO45_0737 PF03705 CheR methyltransferase, all-alpha domain VCSRO45_0738 PF00460 Flagella basal body rod protein VCSRO45_0739 PF00460 Flagella basal body rod protein VCSRO45_0739 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO45_0740 PF03963 Flagellar hook capping protein - N-terminal region VCSRO45_0740 PF13860 FlgD Ig-like domain VCSRO45_0740 PF13861 FlgD Tudor-like domain VCSRO45_0741 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO45_0741 PF00460 Flagella basal body rod protein VCSRO45_0741 PF07559 Flagellar basal body protein FlaE VCSRO45_0742 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO45_0742 PF00460 Flagella basal body rod protein VCSRO45_0743 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO45_0743 PF00460 Flagella basal body rod protein VCSRO45_0744 PF02107 Flagellar L-ring protein VCSRO45_0745 PF02119 Flagellar P-ring protein VCSRO45_0746 PF10135 Rod binding protein VCSRO45_0746 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VCSRO45_0747 PF07196 Flagellin hook IN motif VCSRO45_0747 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO45_0749 PF00669 Bacterial flagellin N-terminal helical region VCSRO45_0749 PF07196 Flagellin hook IN motif VCSRO45_0749 PF00700 Bacterial flagellin C-terminal helical region VCSRO45_0750 PF00669 Bacterial flagellin N-terminal helical region VCSRO45_0750 PF07196 Flagellin hook IN motif VCSRO45_0750 PF00700 Bacterial flagellin C-terminal helical region VCSRO45_0767 PF06071 Protein of unknown function (DUF933) VCSRO45_0767 PF01926 50S ribosome-binding GTPase VCSRO45_0768 PF01195 Peptidyl-tRNA hydrolase VCSRO45_0769 PF14572 Phosphoribosyl synthetase-associated domain VCSRO45_0769 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VCSRO45_0770 PF08544 GHMP kinases C terminal VCSRO45_0770 PF00288 GHMP kinases N terminal domain VCSRO45_0771 PF03550 Outer membrane lipoprotein LolB VCSRO45_0772 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VCSRO45_0772 PF01488 Shikimate / quinate 5-dehydrogenase VCSRO45_0772 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VCSRO45_0773 PF03462 PCRF domain VCSRO45_0773 PF00472 RF-1 domain VCSRO45_0774 PF13847 Methyltransferase domain VCSRO45_0774 PF17827 PrmC N-terminal domain VCSRO45_0775 PF04247 Invasion gene expression up-regulator, SirB VCSRO45_0776 PF13369 Transglutaminase-like superfamily VCSRO45_0777 PF00793 DAHP synthetase I family VCSRO45_0778 PF00149 Calcineurin-like phosphoesterase VCSRO45_0778 PF02872 5'-nucleotidase, C-terminal domain VCSRO45_0779 PF04073 Aminoacyl-tRNA editing domain VCSRO45_0780 PF00860 Permease family VCSRO45_0783 PF03358 NADPH-dependent FMN reductase VCSRO45_0784 PF03960 ArsC family VCSRO45_0785 PF13181 Tetratricopeptide repeat VCSRO45_0785 PF01435 Peptidase family M48 VCSRO45_0787 PF01594 AI-2E family transporter VCSRO45_0788 PF00672 HAMP domain VCSRO45_0788 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_0788 PF02743 Cache domain VCSRO45_0789 PF00578 AhpC/TSA family VCSRO45_0791 PF00701 Dihydrodipicolinate synthetase family VCSRO45_0792 PF06804 NlpB/DapX lipoprotein VCSRO45_0794 PF02557 D-alanyl-D-alanine carboxypeptidase VCSRO45_0795 PF07687 Peptidase dimerisation domain VCSRO45_0795 PF01546 Peptidase family M20/M25/M40 VCSRO45_0796 PF03960 ArsC family VCSRO45_0799 PF11143 Protein of unknown function (DUF2919) VCSRO45_0800 PF04261 Dyp-type peroxidase family VCSRO45_0801 PF00700 Bacterial flagellin C-terminal helical region VCSRO45_0801 PF07196 Flagellin hook IN motif VCSRO45_0801 PF00669 Bacterial flagellin N-terminal helical region VCSRO45_0802 PF07196 Flagellin hook IN motif VCSRO45_0802 PF00669 Bacterial flagellin N-terminal helical region VCSRO45_0802 PF00700 Bacterial flagellin C-terminal helical region VCSRO45_0803 PF00700 Bacterial flagellin C-terminal helical region VCSRO45_0803 PF07196 Flagellin hook IN motif VCSRO45_0803 PF00669 Bacterial flagellin N-terminal helical region VCSRO45_0804 PF03646 FlaG protein VCSRO45_0805 PF07196 Flagellin hook IN motif VCSRO45_0805 PF07195 Flagellar hook-associated protein 2 C-terminus VCSRO45_0805 PF02465 Flagellar hook-associated protein 2 N-terminus VCSRO45_0807 PF02561 Flagellar protein FliS VCSRO45_0809 PF02954 Bacterial regulatory protein, Fis family VCSRO45_0809 PF06490 Flagellar regulatory protein FleQ VCSRO45_0809 PF00158 Sigma-54 interaction domain VCSRO45_0810 PF13188 PAS domain VCSRO45_0810 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_0810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0811 PF00158 Sigma-54 interaction domain VCSRO45_0811 PF00072 Response regulator receiver domain VCSRO45_0811 PF02954 Bacterial regulatory protein, Fis family VCSRO45_0812 PF02049 Flagellar hook-basal body complex protein FliE VCSRO45_0813 PF01514 Secretory protein of YscJ/FliF family VCSRO45_0813 PF08345 Flagellar M-ring protein C-terminal VCSRO45_0814 PF14842 FliG N-terminal domain VCSRO45_0814 PF01706 FliG C-terminal domain VCSRO45_0814 PF14841 FliG middle domain VCSRO45_0816 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO45_0816 PF18269 T3SS EscN ATPase C-terminal domain VCSRO45_0819 PF03748 Flagellar basal body-associated protein FliL VCSRO45_0820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VCSRO45_0820 PF02154 Flagellar motor switch protein FliM VCSRO45_0821 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VCSRO45_0822 PF04347 Flagellar biosynthesis protein, FliO VCSRO45_0823 PF00813 FliP family VCSRO45_0824 PF01313 Bacterial export proteins, family 3 VCSRO45_0825 PF01311 Bacterial export proteins, family 1 VCSRO45_0826 PF01312 FlhB HrpN YscU SpaS Family VCSRO45_0827 PF01713 Smr domain VCSRO45_0828 PF05175 Methyltransferase small domain VCSRO45_0829 PF01264 Chorismate synthase VCSRO45_0830 PF03458 UPF0126 domain VCSRO45_0831 PF04315 Elongation factor P hydroxylase VCSRO45_0832 PF08891 YfcL protein VCSRO45_0833 PF03358 NADPH-dependent FMN reductase VCSRO45_0834 PF01266 FAD dependent oxidoreductase VCSRO45_0834 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VCSRO45_0835 PF02801 Beta-ketoacyl synthase, C-terminal domain VCSRO45_0835 PF00109 Beta-ketoacyl synthase, N-terminal domain VCSRO45_0836 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO45_0836 PF11890 Domain of unknown function (DUF3410) VCSRO45_0836 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO45_0837 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO45_0837 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO45_0838 PF01475 Ferric uptake regulator family VCSRO45_0840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_0840 PF03466 LysR substrate binding domain VCSRO45_0841 PF03788 LrgA family VCSRO45_0842 PF04172 LrgB-like family VCSRO45_0843 PF00258 Flavodoxin VCSRO45_0845 PF12697 Alpha/beta hydrolase family VCSRO45_0846 PF03925 SeqA protein C-terminal domain VCSRO45_0846 PF17206 SeqA protein N-terminal domain VCSRO45_0847 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO45_0847 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO45_0847 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO45_0847 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO45_0849 PF01784 NIF3 (NGG1p interacting factor 3) VCSRO45_0850 PF00285 Citrate synthase, C-terminal domain VCSRO45_0851 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VCSRO45_0852 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VCSRO45_0853 PF00890 FAD binding domain VCSRO45_0853 PF02910 Fumarate reductase flavoprotein C-term VCSRO45_0854 PF13085 2Fe-2S iron-sulfur cluster binding domain VCSRO45_0855 PF00676 Dehydrogenase E1 component VCSRO45_0855 PF16078 2-oxoglutarate dehydrogenase N-terminus VCSRO45_0855 PF16870 2-oxoglutarate dehydrogenase C-terminal VCSRO45_0855 PF02779 Transketolase, pyrimidine binding domain VCSRO45_0856 PF02817 e3 binding domain VCSRO45_0856 PF00364 Biotin-requiring enzyme VCSRO45_0856 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VCSRO45_0857 PF08442 ATP-grasp domain VCSRO45_0857 PF00549 CoA-ligase VCSRO45_0858 PF02629 CoA binding domain VCSRO45_0858 PF00549 CoA-ligase VCSRO45_0859 PF00950 ABC 3 transport family VCSRO45_0860 PF00005 ABC transporter VCSRO45_0861 PF01297 Zinc-uptake complex component A periplasmic VCSRO45_0862 PF02311 AraC-like ligand binding domain VCSRO45_0862 PF12833 Helix-turn-helix domain VCSRO45_0863 PF04023 FeoA domain VCSRO45_0864 PF07664 Ferrous iron transport protein B C terminus VCSRO45_0864 PF02421 Ferrous iron transport protein B VCSRO45_0864 PF07670 Nucleoside recognition VCSRO45_0867 PF03485 Arginyl tRNA synthetase N terminal domain VCSRO45_0867 PF00750 tRNA synthetases class I (R) VCSRO45_0867 PF05746 DALR anticodon binding domain VCSRO45_0869 PF00675 Insulinase (Peptidase family M16) VCSRO45_0869 PF05193 Peptidase M16 inactive domain VCSRO45_0870 PF00300 Histidine phosphatase superfamily (branch 1) VCSRO45_0871 PF00771 FHIPEP family VCSRO45_0872 PF00448 SRP54-type protein, GTPase domain VCSRO45_0873 PF10609 NUBPL iron-transfer P-loop NTPase VCSRO45_0874 PF04545 Sigma-70, region 4 VCSRO45_0874 PF04539 Sigma-70 region 3 VCSRO45_0874 PF04542 Sigma-70 region 2 VCSRO45_0875 PF00072 Response regulator receiver domain VCSRO45_0876 PF04344 Chemotaxis phosphatase, CheZ VCSRO45_0877 PF01627 Hpt domain VCSRO45_0877 PF00072 Response regulator receiver domain VCSRO45_0877 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_0877 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO45_0877 PF01584 CheW-like domain VCSRO45_0878 PF01339 CheB methylesterase VCSRO45_0878 PF00072 Response regulator receiver domain VCSRO45_0879 PF13614 AAA domain VCSRO45_0881 PF01584 CheW-like domain VCSRO45_0883 PF00005 ABC transporter VCSRO45_0884 PF03379 CcmB protein VCSRO45_0885 PF01578 Cytochrome C assembly protein VCSRO45_0886 PF04995 Heme exporter protein D (CcmD) VCSRO45_0887 PF03100 CcmE VCSRO45_0888 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VCSRO45_0888 PF01578 Cytochrome C assembly protein VCSRO45_0889 PF08534 Redoxin VCSRO45_0890 PF03918 Cytochrome C biogenesis protein VCSRO45_0892 PF04333 MlaA lipoprotein VCSRO45_0895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VCSRO45_0895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VCSRO45_0896 PF00462 Glutaredoxin VCSRO45_0897 PF01131 DNA topoisomerase VCSRO45_0897 PF01751 Toprim domain VCSRO45_0898 PF00850 Histone deacetylase domain VCSRO45_0901 PF00884 Sulfatase VCSRO45_0901 PF11893 Domain of unknown function (DUF3413) VCSRO45_0902 PF07208 Protein of unknown function (DUF1414) VCSRO45_0903 PF04245 37-kD nucleoid-associated bacterial protein VCSRO45_0905 PF03553 Na+/H+ antiporter family VCSRO45_0906 PF03553 Na+/H+ antiporter family VCSRO45_0907 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO45_0907 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO45_0908 PF01914 MarC family integral membrane protein VCSRO45_0909 PF00465 Iron-containing alcohol dehydrogenase VCSRO45_0909 PF00171 Aldehyde dehydrogenase family VCSRO45_0911 PF13006 Insertion element 4 transposase N-terminal VCSRO45_0911 PF01609 Transposase DDE domain VCSRO45_0913 PF01740 STAS domain VCSRO45_0913 PF00916 Sulfate permease family VCSRO45_0914 PF00575 S1 RNA binding domain VCSRO45_0914 PF10150 Ribonuclease E/G family VCSRO45_0914 PF12111 Polyribonucleotide phosphorylase C terminal VCSRO45_0915 PF01479 S4 domain VCSRO45_0915 PF00849 RNA pseudouridylate synthase VCSRO45_0916 PF02545 Maf-like protein VCSRO45_0917 PF02620 Large ribosomal RNA subunit accumulation protein YceD VCSRO45_0918 PF01783 Ribosomal L32p protein family VCSRO45_0919 PF02504 Fatty acid synthesis protein VCSRO45_0920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCSRO45_0920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VCSRO45_0921 PF00698 Acyl transferase domain VCSRO45_0923 PF00550 Phosphopantetheine attachment site VCSRO45_0924 PF00109 Beta-ketoacyl synthase, N-terminal domain VCSRO45_0924 PF02801 Beta-ketoacyl synthase, C-terminal domain VCSRO45_0925 PF01063 Amino-transferase class IV VCSRO45_0926 PF02618 YceG-like family VCSRO45_0927 PF02223 Thymidylate kinase VCSRO45_0928 PF09115 DNA polymerase III, delta subunit, C terminal VCSRO45_0929 PF01026 TatD related DNase VCSRO45_0930 PF00367 phosphotransferase system, EIIB VCSRO45_0930 PF02378 Phosphotransferase system, EIIC VCSRO45_0932 PF00209 Sodium:neurotransmitter symporter family VCSRO45_0935 PF01734 Patatin-like phospholipase VCSRO45_0936 PF02887 Pyruvate kinase, alpha/beta domain VCSRO45_0936 PF00224 Pyruvate kinase, barrel domain VCSRO45_0937 PF00480 ROK family VCSRO45_0938 PF00072 Response regulator receiver domain VCSRO45_0938 PF01584 CheW-like domain VCSRO45_0941 PF13847 Methyltransferase domain VCSRO45_0943 PF01263 Aldose 1-epimerase VCSRO45_0944 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO45_0944 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO45_0945 PF01641 SelR domain VCSRO45_0947 PF07023 Protein of unknown function (DUF1315) VCSRO45_0948 PF17763 Glutaminase/Asparaginase C-terminal domain VCSRO45_0948 PF00710 Asparaginase, N-terminal VCSRO45_0949 PF01343 Peptidase family S49 VCSRO45_0950 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_0950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCSRO45_0951 PF00551 Formyl transferase VCSRO45_0951 PF01842 ACT domain VCSRO45_0953 PF04851 Type III restriction enzyme, res subunit VCSRO45_0953 PF13307 Helicase C-terminal domain VCSRO45_0954 PF00814 Glycoprotease family VCSRO45_0957 PF00561 alpha/beta hydrolase fold VCSRO45_0958 PF13193 AMP-binding enzyme C-terminal domain VCSRO45_0958 PF00501 AMP-binding enzyme VCSRO45_0959 PF00570 HRDC domain VCSRO45_0959 PF01612 3'-5' exonuclease VCSRO45_0960 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VCSRO45_0960 PF01694 Rhomboid family VCSRO45_0962 PF13286 Phosphohydrolase-associated domain VCSRO45_0962 PF01966 HD domain VCSRO45_0964 PF00155 Aminotransferase class I and II VCSRO45_0965 PF00425 chorismate binding enzyme VCSRO45_0966 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO45_0966 PF16582 Middle domain of thiamine pyrophosphate VCSRO45_0966 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO45_0967 PF12697 Alpha/beta hydrolase family VCSRO45_0968 PF00378 Enoyl-CoA hydratase/isomerase VCSRO45_0969 PF13378 Enolase C-terminal domain-like VCSRO45_0970 PF13193 AMP-binding enzyme C-terminal domain VCSRO45_0970 PF00501 AMP-binding enzyme VCSRO45_0971 PF03594 Benzoate membrane transport protein VCSRO45_0972 PF07883 Cupin domain VCSRO45_0972 PF01381 Helix-turn-helix VCSRO45_0973 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_0973 PF00672 HAMP domain VCSRO45_0973 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_0974 PF07690 Major Facilitator Superfamily VCSRO45_0979 PF04170 NlpE N-terminal domain VCSRO45_0980 PF03776 Septum formation topological specificity factor MinE VCSRO45_0981 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VCSRO45_0982 PF05209 Septum formation inhibitor MinC, N-terminal domain VCSRO45_0982 PF03775 Septum formation inhibitor MinC, C-terminal domain VCSRO45_0983 PF05166 YcgL domain VCSRO45_0984 PF13406 Transglycosylase SLT domain VCSRO45_0985 PF03466 LysR substrate binding domain VCSRO45_0985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_0986 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO45_0986 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO45_0986 PF07670 Nucleoside recognition VCSRO45_0987 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO45_0988 PF18364 Molybdopterin oxidoreductase N-terminal domain VCSRO45_0988 PF00384 Molybdopterin oxidoreductase VCSRO45_0988 PF01568 Molydopterin dinucleotide binding domain VCSRO45_0990 PF03466 LysR substrate binding domain VCSRO45_0990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_0992 PF01494 FAD binding domain VCSRO45_0993 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VCSRO45_0994 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VCSRO45_0994 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VCSRO45_1003 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_1003 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1003 PF00563 EAL domain VCSRO45_1006 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VCSRO45_1007 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO45_1008 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VCSRO45_1009 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCSRO45_1010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCSRO45_1011 PF02954 Bacterial regulatory protein, Fis family VCSRO45_1011 PF00158 Sigma-54 interaction domain VCSRO45_1011 PF00072 Response regulator receiver domain VCSRO45_1012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1012 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1013 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO45_1013 PF05698 Bacterial trigger factor protein (TF) C-terminus VCSRO45_1013 PF05697 Bacterial trigger factor protein (TF) VCSRO45_1014 PF00574 Clp protease VCSRO45_1015 PF07724 AAA domain (Cdc48 subfamily) VCSRO45_1015 PF06689 ClpX C4-type zinc finger VCSRO45_1015 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO45_1016 PF02190 ATP-dependent protease La (LON) substrate-binding domain VCSRO45_1016 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO45_1016 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO45_1017 PF00216 Bacterial DNA-binding protein VCSRO45_1018 PF13145 PPIC-type PPIASE domain VCSRO45_1020 PF02224 Cytidylate kinase VCSRO45_1021 PF00575 S1 RNA binding domain VCSRO45_1022 PF00216 Bacterial DNA-binding protein VCSRO45_1023 PF06305 Lipopolysaccharide assembly protein A domain VCSRO45_1024 PF18073 Rubredoxin metal binding domain VCSRO45_1025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VCSRO45_1026 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1027 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO45_1027 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1028 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO45_1029 PF00005 ABC transporter VCSRO45_1029 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_1030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_1030 PF00005 ABC transporter VCSRO45_1033 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VCSRO45_1035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1035 PF03466 LysR substrate binding domain VCSRO45_1037 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VCSRO45_1037 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VCSRO45_1038 PF01037 Lrp/AsnC ligand binding domain VCSRO45_1039 PF01580 FtsK/SpoIIIE family VCSRO45_1039 PF09397 Ftsk gamma domain VCSRO45_1039 PF17854 FtsK alpha domain VCSRO45_1039 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VCSRO45_1040 PF01609 Transposase DDE domain VCSRO45_1040 PF13006 Insertion element 4 transposase N-terminal VCSRO45_1041 PF02600 Disulfide bond formation protein DsbB VCSRO45_1042 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VCSRO45_1043 PF07840 FadR C-terminal domain VCSRO45_1043 PF00392 Bacterial regulatory proteins, gntR family VCSRO45_1045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1045 PF00672 HAMP domain VCSRO45_1046 PF01230 HIT domain VCSRO45_1049 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VCSRO45_1049 PF13036 Peptidoglycan-synthase activator LpoB VCSRO45_1051 PF05728 Uncharacterised protein family (UPF0227) VCSRO45_1052 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_1054 PF16458 Beta-prism lectin VCSRO45_1054 PF12563 Hemolytic toxin N terminal VCSRO45_1054 PF07968 Leukocidin/Hemolysin toxin family VCSRO45_1056 PF00271 Helicase conserved C-terminal domain VCSRO45_1056 PF02559 CarD-like/TRCF domain VCSRO45_1056 PF00270 DEAD/DEAH box helicase VCSRO45_1056 PF17757 UvrB interaction domain VCSRO45_1056 PF03461 TRCF domain VCSRO45_1058 PF02687 FtsX-like permease family VCSRO45_1058 PF12704 MacB-like periplasmic core domain VCSRO45_1059 PF00005 ABC transporter VCSRO45_1060 PF02687 FtsX-like permease family VCSRO45_1060 PF12704 MacB-like periplasmic core domain VCSRO45_1062 PF00753 Metallo-beta-lactamase superfamily VCSRO45_1062 PF03772 Competence protein VCSRO45_1062 PF13567 Domain of unknown function (DUF4131) VCSRO45_1063 PF00664 ABC transporter transmembrane region VCSRO45_1063 PF00005 ABC transporter VCSRO45_1064 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VCSRO45_1065 PF03966 Trm112p-like protein VCSRO45_1066 PF02348 Cytidylyltransferase VCSRO45_1067 PF04293 SpoVR like protein VCSRO45_1068 PF04285 Protein of unknown function (DUF444) VCSRO45_1069 PF08298 PrkA AAA domain VCSRO45_1069 PF06798 PrkA serine protein kinase C-terminal domain VCSRO45_1070 PF13006 Insertion element 4 transposase N-terminal VCSRO45_1070 PF01609 Transposase DDE domain VCSRO45_1071 PF03887 YfbU domain VCSRO45_1073 PF04055 Radical SAM superfamily VCSRO45_1074 PF00672 HAMP domain VCSRO45_1074 PF02743 Cache domain VCSRO45_1074 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1076 PF01228 Glycine radical VCSRO45_1076 PF02901 Pyruvate formate lyase-like VCSRO45_1080 PF00005 ABC transporter VCSRO45_1081 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO45_1082 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1083 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1084 PF03372 Endonuclease/Exonuclease/phosphatase family VCSRO45_1085 PF00672 HAMP domain VCSRO45_1085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1086 PF10689 Protein of unknown function (DUF2496) VCSRO45_1087 PF07445 Primosomal replication protein priC VCSRO45_1088 PF01925 Sulfite exporter TauE/SafE VCSRO45_1089 PF06733 DEAD_2 VCSRO45_1089 PF13307 Helicase C-terminal domain VCSRO45_1090 PF13609 Gram-negative porin VCSRO45_1091 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO45_1092 PF02810 SEC-C motif VCSRO45_1093 PF00563 EAL domain VCSRO45_1093 PF08668 HDOD domain VCSRO45_1094 PF00149 Calcineurin-like phosphoesterase VCSRO45_1095 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VCSRO45_1096 PF01406 tRNA synthetases class I (C) catalytic domain VCSRO45_1096 PF09190 DALR domain VCSRO45_1097 PF02075 Crossover junction endodeoxyribonuclease RuvC VCSRO45_1098 PF07499 RuvA, C-terminal domain VCSRO45_1098 PF01330 RuvA N terminal domain VCSRO45_1099 PF05491 RuvB C-terminal winged helix domain VCSRO45_1099 PF17864 RuvB AAA lid domain VCSRO45_1099 PF05496 Holliday junction DNA helicase RuvB P-loop domain VCSRO45_1101 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO45_1102 PF02322 Cytochrome bd terminal oxidase subunit II VCSRO45_1103 PF08173 Membrane bound YbgT-like protein VCSRO45_1104 PF03061 Thioesterase superfamily VCSRO45_1105 PF01618 MotA/TolQ/ExbB proton channel family VCSRO45_1106 PF02472 Biopolymer transport protein ExbD/TolR VCSRO45_1108 PF07676 WD40-like Beta Propeller Repeat VCSRO45_1108 PF04052 TolB amino-terminal domain VCSRO45_1109 PF00691 OmpA family VCSRO45_1111 PF02445 Quinolinate synthetase A protein VCSRO45_1113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1113 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1113 PF09308 LuxQ, periplasmic VCSRO45_1113 PF00072 Response regulator receiver domain VCSRO45_1114 PF06610 L-alanine exporter VCSRO45_1115 PF01238 Phosphomannose isomerase type I VCSRO45_1116 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO45_1116 PF02378 Phosphotransferase system, EIIC VCSRO45_1116 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO45_1117 PF12833 Helix-turn-helix domain VCSRO45_1119 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO45_1122 PF00155 Aminotransferase class I and II VCSRO45_1122 PF00392 Bacterial regulatory proteins, gntR family VCSRO45_1126 PF00171 Aldehyde dehydrogenase family VCSRO45_1128 PF01590 GAF domain VCSRO45_1128 PF00158 Sigma-54 interaction domain VCSRO45_1128 PF02954 Bacterial regulatory protein, Fis family VCSRO45_1129 PF09905 DNA-binding protein VF530 VCSRO45_1131 PF00875 DNA photolyase VCSRO45_1131 PF03441 FAD binding domain of DNA photolyase VCSRO45_1136 PF02796 Helix-turn-helix domain of resolvase VCSRO45_1136 PF00239 Resolvase, N terminal domain VCSRO45_1137 PF01527 Transposase VCSRO45_1138 PF00665 Integrase core domain VCSRO45_1139 PF01527 Transposase VCSRO45_1147 PF04717 Type VI secretion system, phage-baseplate injector VCSRO45_1148 PF05638 Type VI secretion system effector, Hcp VCSRO45_1151 PF04471 Restriction endonuclease VCSRO45_1151 PF14338 Mrr N-terminal domain VCSRO45_1152 PF08463 EcoEI R protein C-terminal VCSRO45_1152 PF00271 Helicase conserved C-terminal domain VCSRO45_1152 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VCSRO45_1152 PF04851 Type III restriction enzyme, res subunit VCSRO45_1153 PF01420 Type I restriction modification DNA specificity domain VCSRO45_1154 PF02463 RecF/RecN/SMC N terminal domain VCSRO45_1157 PF01527 Transposase VCSRO45_1158 PF00665 Integrase core domain VCSRO45_1159 PF02384 N-6 DNA Methylase VCSRO45_1159 PF12161 HsdM N-terminal domain VCSRO45_1161 PF00665 Integrase core domain VCSRO45_1162 PF01527 Transposase VCSRO45_1163 PF13356 Arm DNA-binding domain VCSRO45_1163 PF00589 Phage integrase family VCSRO45_1164 PF13356 Arm DNA-binding domain VCSRO45_1164 PF00589 Phage integrase family VCSRO45_1166 PF00873 AcrB/AcrD/AcrF family VCSRO45_1167 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO45_1169 PF02470 MlaD protein VCSRO45_1170 PF04403 Paraquat-inducible protein A VCSRO45_1171 PF08362 YcdC-like protein, C-terminal region VCSRO45_1171 PF00440 Bacterial regulatory proteins, tetR family VCSRO45_1172 PF00171 Aldehyde dehydrogenase family VCSRO45_1173 PF07383 Protein of unknown function (DUF1496) VCSRO45_1175 PF16295 Tetracyclin repressor-like, C-terminal domain VCSRO45_1175 PF00440 Bacterial regulatory proteins, tetR family VCSRO45_1176 PF09317 Domain of unknown function (DUF1974) VCSRO45_1176 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCSRO45_1176 PF02770 Acyl-CoA dehydrogenase, middle domain VCSRO45_1176 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCSRO45_1177 PF12241 Trans-2-enoyl-CoA reductase catalytic region VCSRO45_1177 PF07055 Enoyl reductase FAD binding domain VCSRO45_1177 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VCSRO45_1178 PF01176 Translation initiation factor 1A / IF-1 VCSRO45_1179 PF04376 Arginine-tRNA-protein transferase, N terminus VCSRO45_1179 PF04377 Arginine-tRNA-protein transferase, C terminus VCSRO45_1180 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VCSRO45_1181 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VCSRO45_1182 PF10692 Protein of unknown function (DUF2498) VCSRO45_1183 PF08272 Topoisomerase I zinc-ribbon-like VCSRO45_1183 PF01131 DNA topoisomerase VCSRO45_1183 PF01751 Toprim domain VCSRO45_1183 PF01396 Topoisomerase DNA binding C4 zinc finger VCSRO45_1184 PF00483 Nucleotidyl transferase VCSRO45_1185 PF08323 Starch synthase catalytic domain VCSRO45_1185 PF00534 Glycosyl transferases group 1 VCSRO45_1189 PF04993 TfoX N-terminal domain VCSRO45_1189 PF04994 TfoX C-terminal domain VCSRO45_1190 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_1191 PF02613 Nitrate reductase delta subunit VCSRO45_1192 PF00072 Response regulator receiver domain VCSRO45_1192 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_1193 PF02698 DUF218 domain VCSRO45_1194 PF13847 Methyltransferase domain VCSRO45_1195 PF17193 MukF C-terminal domain VCSRO45_1195 PF17192 MukF middle domain VCSRO45_1195 PF03882 MukF winged-helix domain VCSRO45_1196 PF04288 MukE-like family VCSRO45_1197 PF04310 MukB N-terminal VCSRO45_1197 PF16330 MukB hinge domain VCSRO45_1198 PF01037 Lrp/AsnC ligand binding domain VCSRO45_1199 PF01810 LysE type translocator VCSRO45_1200 PF11842 Domain of unknown function (DUF3362) VCSRO45_1200 PF04055 Radical SAM superfamily VCSRO45_1200 PF08497 Radical SAM N-terminal VCSRO45_1201 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_1201 PF00563 EAL domain VCSRO45_1201 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1202 PF00675 Insulinase (Peptidase family M16) VCSRO45_1202 PF05193 Peptidase M16 inactive domain VCSRO45_1205 PF03466 LysR substrate binding domain VCSRO45_1205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1206 PF01717 Cobalamin-independent synthase, Catalytic domain VCSRO45_1206 PF08267 Cobalamin-independent synthase, N-terminal domain VCSRO45_1208 PF03795 YCII-related domain VCSRO45_1209 PF03061 Thioesterase superfamily VCSRO45_1210 PF04279 Intracellular septation protein A VCSRO45_1212 PF02698 DUF218 domain VCSRO45_1213 PF01370 NAD dependent epimerase/dehydratase family VCSRO45_1215 PF01226 Formate/nitrite transporter VCSRO45_1216 PF06796 Periplasmic nitrate reductase protein NapE VCSRO45_1217 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO45_1218 PF01568 Molydopterin dinucleotide binding domain VCSRO45_1218 PF18364 Molybdopterin oxidoreductase N-terminal domain VCSRO45_1218 PF00384 Molybdopterin oxidoreductase VCSRO45_1221 PF01368 DHH family VCSRO45_1221 PF02833 DHHA2 domain VCSRO45_1224 PF00005 ABC transporter VCSRO45_1225 PF00005 ABC transporter VCSRO45_1225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_1226 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1226 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO45_1227 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1228 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO45_1229 PF00158 Sigma-54 interaction domain VCSRO45_1229 PF02954 Bacterial regulatory protein, Fis family VCSRO45_1230 PF04012 PspA/IM30 family VCSRO45_1233 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO45_1233 PF00529 HlyD membrane-fusion protein of T1SS VCSRO45_1234 PF13533 Biotin-lipoyl like VCSRO45_1235 PF00873 AcrB/AcrD/AcrF family VCSRO45_1236 PF03352 Methyladenine glycosylase VCSRO45_1237 PF00582 Universal stress protein family VCSRO45_1238 PF00999 Sodium/hydrogen exchanger family VCSRO45_1238 PF02080 TrkA-C domain VCSRO45_1238 PF02254 TrkA-N domain VCSRO45_1239 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO45_1240 PF13091 PLD-like domain VCSRO45_1240 PF13396 Phospholipase_D-nuclease N-terminal VCSRO45_1241 PF00209 Sodium:neurotransmitter symporter family VCSRO45_1242 PF00849 RNA pseudouridylate synthase VCSRO45_1243 PF01066 CDP-alcohol phosphatidyltransferase VCSRO45_1244 PF00005 ABC transporter VCSRO45_1245 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1246 PF13416 Bacterial extracellular solute-binding protein VCSRO45_1248 PF06945 Protein of unknown function (DUF1289) VCSRO45_1251 PF00005 ABC transporter VCSRO45_1252 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO45_1253 PF03222 Tryptophan/tyrosine permease family VCSRO45_1256 PF01769 Divalent cation transporter VCSRO45_1256 PF00571 CBS domain VCSRO45_1256 PF03448 MgtE intracellular N domain VCSRO45_1257 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1257 PF09308 LuxQ, periplasmic VCSRO45_1257 PF00072 Response regulator receiver domain VCSRO45_1257 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1258 PF00563 EAL domain VCSRO45_1258 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_1258 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1260 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO45_1260 PF08453 Peptidase family M9 N-terminal VCSRO45_1260 PF01752 Collagenase VCSRO45_1262 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO45_1262 PF12793 Sugar transport-related sRNA regulator N-term VCSRO45_1266 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1266 PF00672 HAMP domain VCSRO45_1266 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_1268 PF00360 Phytochrome region VCSRO45_1268 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1268 PF01590 GAF domain VCSRO45_1268 PF00563 EAL domain VCSRO45_1269 PF01386 Ribosomal L25p family VCSRO45_1270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1271 PF00072 Response regulator receiver domain VCSRO45_1271 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_1273 PF04851 Type III restriction enzyme, res subunit VCSRO45_1273 PF00271 Helicase conserved C-terminal domain VCSRO45_1274 PF01479 S4 domain VCSRO45_1274 PF00849 RNA pseudouridylate synthase VCSRO45_1275 PF07690 Major Facilitator Superfamily VCSRO45_1277 PF13460 NAD(P)H-binding VCSRO45_1277 PF11066 Protein of unknown function (DUF2867) VCSRO45_1278 PF01554 MatE VCSRO45_1279 PF00005 ABC transporter VCSRO45_1280 PF02687 FtsX-like permease family VCSRO45_1280 PF12704 MacB-like periplasmic core domain VCSRO45_1282 PF06965 Na+/H+ antiporter 1 VCSRO45_1283 PF00202 Aminotransferase class-III VCSRO45_1284 PF16653 Saccharopine dehydrogenase C-terminal domain VCSRO45_1284 PF03435 Saccharopine dehydrogenase NADP binding domain VCSRO45_1286 PF00691 OmpA family VCSRO45_1286 PF05736 OprF membrane domain VCSRO45_1287 PF02321 Outer membrane efflux protein VCSRO45_1291 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1291 PF03466 LysR substrate binding domain VCSRO45_1293 PF01863 Protein of unknown function DUF45 VCSRO45_1294 PF05971 RNA methyltransferase VCSRO45_1297 PF04204 Homoserine O-succinyltransferase VCSRO45_1302 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO45_1305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1305 PF00989 PAS fold VCSRO45_1305 PF17203 Single cache domain 3 VCSRO45_1305 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VCSRO45_1306 PF12431 Transcriptional regulator VCSRO45_1306 PF00072 Response regulator receiver domain VCSRO45_1308 PF01584 CheW-like domain VCSRO45_1308 PF00072 Response regulator receiver domain VCSRO45_1311 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1311 PF00072 Response regulator receiver domain VCSRO45_1315 PF07690 Major Facilitator Superfamily VCSRO45_1316 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VCSRO45_1316 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VCSRO45_1317 PF10509 Galactokinase galactose-binding signature VCSRO45_1317 PF08544 GHMP kinases C terminal VCSRO45_1317 PF00288 GHMP kinases N terminal domain VCSRO45_1318 PF01263 Aldose 1-epimerase VCSRO45_1319 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1320 PF00563 EAL domain VCSRO45_1320 PF17154 Gammaproteobacterial periplasmic sensor domain VCSRO45_1320 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1320 PF00672 HAMP domain VCSRO45_1322 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO45_1322 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO45_1322 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO45_1323 PF03306 Alpha-acetolactate decarboxylase VCSRO45_1324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1324 PF03466 LysR substrate binding domain VCSRO45_1325 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) VCSRO45_1326 PF00361 Proton-conducting membrane transporter VCSRO45_1326 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCSRO45_1327 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1327 PF03466 LysR substrate binding domain VCSRO45_1328 PF13193 AMP-binding enzyme C-terminal domain VCSRO45_1328 PF00501 AMP-binding enzyme VCSRO45_1331 PF04266 ASCH domain VCSRO45_1334 PF10415 Fumarase C C-terminus VCSRO45_1334 PF00206 Lyase VCSRO45_1336 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO45_1337 PF02322 Cytochrome bd terminal oxidase subunit II VCSRO45_1338 PF12704 MacB-like periplasmic core domain VCSRO45_1338 PF00005 ABC transporter VCSRO45_1338 PF02687 FtsX-like permease family VCSRO45_1339 PF00005 ABC transporter VCSRO45_1339 PF12704 MacB-like periplasmic core domain VCSRO45_1339 PF02687 FtsX-like permease family VCSRO45_1340 PF02687 FtsX-like permease family VCSRO45_1340 PF12704 MacB-like periplasmic core domain VCSRO45_1340 PF00005 ABC transporter VCSRO45_1342 PF00529 HlyD membrane-fusion protein of T1SS VCSRO45_1344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1344 PF03466 LysR substrate binding domain VCSRO45_1345 PF00141 Peroxidase VCSRO45_1346 PF00232 Glycosyl hydrolase family 1 VCSRO45_1347 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_1348 PF01042 Endoribonuclease L-PSP VCSRO45_1349 PF04074 YhcH/YjgK/YiaL VCSRO45_1350 PF03009 Glycerophosphoryl diester phosphodiesterase family VCSRO45_1351 PF00455 DeoR C terminal sensor domain VCSRO45_1351 PF08220 DeoR-like helix-turn-helix domain VCSRO45_1352 PF17912 MalK OB fold domain VCSRO45_1352 PF00005 ABC transporter VCSRO45_1353 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1354 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1355 PF13416 Bacterial extracellular solute-binding protein VCSRO45_1357 PF01618 MotA/TolQ/ExbB proton channel family VCSRO45_1358 PF01618 MotA/TolQ/ExbB proton channel family VCSRO45_1359 PF02472 Biopolymer transport protein ExbD/TolR VCSRO45_1360 PF03544 Gram-negative bacterial TonB protein C-terminal VCSRO45_1362 PF14743 DNA ligase OB-like domain VCSRO45_1362 PF01068 ATP dependent DNA ligase domain VCSRO45_1365 PF01554 MatE VCSRO45_1367 PF03881 Fructosamine kinase VCSRO45_1369 PF00877 NlpC/P60 family VCSRO45_1370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1370 PF00672 HAMP domain VCSRO45_1370 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_1372 PF03942 DTW domain VCSRO45_1373 PF00480 ROK family VCSRO45_1375 PF00994 Probable molybdopterin binding domain VCSRO45_1375 PF03454 MoeA C-terminal region (domain IV) VCSRO45_1375 PF03453 MoeA N-terminal region (domain I and II) VCSRO45_1376 PF12804 MobA-like NTP transferase domain VCSRO45_1377 PF00005 ABC transporter VCSRO45_1377 PF08402 TOBE domain VCSRO45_1378 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1379 PF12849 PBP superfamily domain VCSRO45_1380 PF02954 Bacterial regulatory protein, Fis family VCSRO45_1380 PF00072 Response regulator receiver domain VCSRO45_1380 PF00158 Sigma-54 interaction domain VCSRO45_1381 PF02954 Bacterial regulatory protein, Fis family VCSRO45_1381 PF13188 PAS domain VCSRO45_1381 PF00158 Sigma-54 interaction domain VCSRO45_1382 PF00989 PAS fold VCSRO45_1382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1382 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1383 PF12848 ABC transporter VCSRO45_1383 PF00005 ABC transporter VCSRO45_1384 PF02634 FdhD/NarQ family VCSRO45_1388 PF02613 Nitrate reductase delta subunit VCSRO45_1390 PF12838 4Fe-4S dicluster domain VCSRO45_1390 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VCSRO45_1390 PF01568 Molydopterin dinucleotide binding domain VCSRO45_1390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCSRO45_1390 PF12838 4Fe-4S dicluster domain VCSRO45_1390 PF01568 Molydopterin dinucleotide binding domain VCSRO45_1390 PF00384 Molybdopterin oxidoreductase VCSRO45_1390 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VCSRO45_1390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCSRO45_1390 PF00384 Molybdopterin oxidoreductase VCSRO45_1391 PF13247 4Fe-4S dicluster domain VCSRO45_1394 PF02146 Sir2 family VCSRO45_1395 PF04461 Protein of unknown function (DUF520) VCSRO45_1396 PF00793 DAHP synthetase I family VCSRO45_1399 PF17783 CvfB-like winged helix domain VCSRO45_1399 PF13509 S1 domain VCSRO45_1400 PF01189 16S rRNA methyltransferase RsmB/F VCSRO45_1400 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VCSRO45_1400 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VCSRO45_1401 PF02470 MlaD protein VCSRO45_1402 PF04403 Paraquat-inducible protein A VCSRO45_1403 PF00005 ABC transporter VCSRO45_1403 PF00664 ABC transporter transmembrane region VCSRO45_1404 PF13185 GAF domain VCSRO45_1405 PF17516 ProQ C-terminal domain VCSRO45_1405 PF04352 ProQ/FINO family VCSRO45_1406 PF11818 C-terminal domain of tail specific protease (DUF3340) VCSRO45_1406 PF17804 Tail specific protease N-terminal domain VCSRO45_1406 PF00595 PDZ domain VCSRO45_1406 PF03572 Peptidase family S41 VCSRO45_1408 PF01433 Peptidase family M1 domain VCSRO45_1408 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VCSRO45_1408 PF11940 Domain of unknown function (DUF3458) Ig-like fold VCSRO45_1410 PF05088 Bacterial NAD-glutamate dehydrogenase VCSRO45_1411 PF01180 Dihydroorotate dehydrogenase VCSRO45_1412 PF07126 Cell-division protein ZapC VCSRO45_1414 PF10672 S-adenosylmethionine-dependent methyltransferase VCSRO45_1414 PF02926 THUMP domain VCSRO45_1414 PF01170 Putative RNA methylase family UPF0020 VCSRO45_1416 PF12848 ABC transporter VCSRO45_1416 PF00005 ABC transporter VCSRO45_1416 PF16326 ABC transporter C-terminal domain VCSRO45_1418 PF04957 Ribosome modulation factor VCSRO45_1419 PF07977 FabA-like domain VCSRO45_1420 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO45_1420 PF13654 AAA domain VCSRO45_1421 PF17414 MatP C-terminal ribbon-helix-helix domain VCSRO45_1421 PF06303 MatP N-terminal domain VCSRO45_1434 PF11713 Peptidase C80 family VCSRO45_1434 PF12146 Serine aminopeptidase, S33 VCSRO45_1434 PF11647 Membrane Localization Domain VCSRO45_1434 PF16671 Actin cross-linking domain VCSRO45_1434 PF07634 RtxA repeat VCSRO45_1435 PF00665 Integrase core domain VCSRO45_1436 PF01527 Transposase VCSRO45_1437 PF07634 RtxA repeat VCSRO45_1437 PF11713 Peptidase C80 family VCSRO45_1437 PF11647 Membrane Localization Domain VCSRO45_1437 PF12146 Serine aminopeptidase, S33 VCSRO45_1437 PF16671 Actin cross-linking domain VCSRO45_1438 PF11647 Membrane Localization Domain VCSRO45_1438 PF11713 Peptidase C80 family VCSRO45_1438 PF12146 Serine aminopeptidase, S33 VCSRO45_1438 PF16671 Actin cross-linking domain VCSRO45_1438 PF07634 RtxA repeat VCSRO45_1439 PF02794 RTX toxin acyltransferase family VCSRO45_1441 PF00664 ABC transporter transmembrane region VCSRO45_1441 PF00005 ABC transporter VCSRO45_1441 PF03412 Peptidase C39 family VCSRO45_1443 PF00664 ABC transporter transmembrane region VCSRO45_1443 PF00005 ABC transporter VCSRO45_1443 PF03412 Peptidase C39 family VCSRO45_1444 PF00072 Response regulator receiver domain VCSRO45_1444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1444 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1444 PF09308 LuxQ, periplasmic VCSRO45_1447 PF00115 Cytochrome C and Quinol oxidase polypeptide I VCSRO45_1450 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VCSRO45_1450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCSRO45_1452 PF00403 Heavy-metal-associated domain VCSRO45_1455 PF00027 Cyclic nucleotide-binding domain VCSRO45_1455 PF13545 Crp-like helix-turn-helix domain VCSRO45_1456 PF00582 Universal stress protein family VCSRO45_1457 PF01171 PP-loop family VCSRO45_1461 PF00005 ABC transporter VCSRO45_1461 PF08402 TOBE domain VCSRO45_1462 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1463 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1464 PF13416 Bacterial extracellular solute-binding protein VCSRO45_1465 PF13416 Bacterial extracellular solute-binding protein VCSRO45_1468 PF01235 Sodium:alanine symporter family VCSRO45_1469 PF01527 Transposase VCSRO45_1470 PF00665 Integrase core domain VCSRO45_1471 PF13737 Transposase DDE domain VCSRO45_1472 PF01810 LysE type translocator VCSRO45_1476 PF16671 Actin cross-linking domain VCSRO45_1476 PF04717 Type VI secretion system, phage-baseplate injector VCSRO45_1477 PF05638 Type VI secretion system effector, Hcp VCSRO45_1478 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VCSRO45_1479 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1479 PF00672 HAMP domain VCSRO45_1479 PF02743 Cache domain VCSRO45_1480 PF07690 Major Facilitator Superfamily VCSRO45_1481 PF00529 HlyD membrane-fusion protein of T1SS VCSRO45_1481 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO45_1482 PF02321 Outer membrane efflux protein VCSRO45_1484 PF00270 DEAD/DEAH box helicase VCSRO45_1484 PF00271 Helicase conserved C-terminal domain VCSRO45_1485 PF08447 PAS fold VCSRO45_1485 PF13426 PAS domain VCSRO45_1485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1486 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1486 PF00672 HAMP domain VCSRO45_1486 PF02743 Cache domain VCSRO45_1487 PF00893 Small Multidrug Resistance protein VCSRO45_1488 PF00875 DNA photolyase VCSRO45_1488 PF03441 FAD binding domain of DNA photolyase VCSRO45_1489 PF07690 Major Facilitator Superfamily VCSRO45_1490 PF03466 LysR substrate binding domain VCSRO45_1490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1491 PF03099 Biotin/lipoate A/B protein ligase family VCSRO45_1491 PF10437 Bacterial lipoate protein ligase C-terminus VCSRO45_1492 PF00012 Hsp70 protein VCSRO45_1495 PF00270 DEAD/DEAH box helicase VCSRO45_1495 PF11898 Domain of unknown function (DUF3418) VCSRO45_1495 PF04408 Helicase associated domain (HA2) VCSRO45_1495 PF00271 Helicase conserved C-terminal domain VCSRO45_1495 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VCSRO45_1500 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1500 PF00563 EAL domain VCSRO45_1500 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_1502 PF00012 Hsp70 protein VCSRO45_1503 PF00012 Hsp70 protein VCSRO45_1504 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1506 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1506 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_1506 PF00563 EAL domain VCSRO45_1510 PF06508 Queuosine biosynthesis protein QueC VCSRO45_1511 PF04055 Radical SAM superfamily VCSRO45_1514 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO45_1514 PF10414 Sirohaem synthase dimerisation region VCSRO45_1514 PF14824 Sirohaem biosynthesis protein central VCSRO45_1515 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO45_1516 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1517 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1518 PF00005 ABC transporter VCSRO45_1519 PF01027 Inhibitor of apoptosis-promoting Bax1 VCSRO45_1520 PF04358 DsrC like protein VCSRO45_1521 PF00708 Acylphosphatase VCSRO45_1522 PF10672 S-adenosylmethionine-dependent methyltransferase VCSRO45_1522 PF17785 PUA-like domain VCSRO45_1523 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1524 PF08534 Redoxin VCSRO45_1524 PF00462 Glutaredoxin VCSRO45_1525 PF00672 HAMP domain VCSRO45_1525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1525 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1525 PF01627 Hpt domain VCSRO45_1525 PF00072 Response regulator receiver domain VCSRO45_1525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VCSRO45_1528 PF00072 Response regulator receiver domain VCSRO45_1529 PF14497 Glutathione S-transferase, C-terminal domain VCSRO45_1529 PF02798 Glutathione S-transferase, N-terminal domain VCSRO45_1531 PF04209 homogentisate 1,2-dioxygenase VCSRO45_1532 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO45_1533 PF07687 Peptidase dimerisation domain VCSRO45_1533 PF01546 Peptidase family M20/M25/M40 VCSRO45_1536 PF16177 Acetyl-coenzyme A synthetase N-terminus VCSRO45_1536 PF00501 AMP-binding enzyme VCSRO45_1536 PF13193 AMP-binding enzyme C-terminal domain VCSRO45_1537 PF04303 PrpF protein VCSRO45_1538 PF00330 Aconitase family (aconitate hydratase) VCSRO45_1538 PF00694 Aconitase C-terminal domain VCSRO45_1539 PF00285 Citrate synthase, C-terminal domain VCSRO45_1544 PF01970 Tripartite tricarboxylate transporter TctA family VCSRO45_1547 PF02653 Branched-chain amino acid transport system / permease component VCSRO45_1548 PF00005 ABC transporter VCSRO45_1549 PF13407 Periplasmic binding protein domain VCSRO45_1553 PF00072 Response regulator receiver domain VCSRO45_1553 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_1554 PF00672 HAMP domain VCSRO45_1554 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1554 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1555 PF06629 MltA-interacting protein MipA VCSRO45_1556 PF04393 Protein of unknown function (DUF535) VCSRO45_1557 PF00072 Response regulator receiver domain VCSRO45_1557 PF02954 Bacterial regulatory protein, Fis family VCSRO45_1557 PF00158 Sigma-54 interaction domain VCSRO45_1558 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1559 PF00939 Sodium:sulfate symporter transmembrane region VCSRO45_1560 PF00672 HAMP domain VCSRO45_1560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1561 PF00842 Alanine racemase, C-terminal domain VCSRO45_1561 PF01168 Alanine racemase, N-terminal domain VCSRO45_1562 PF00892 EamA-like transporter family VCSRO45_1564 PF13302 Acetyltransferase (GNAT) domain VCSRO45_1565 PF18024 Helix-turn-helix domain VCSRO45_1565 PF00158 Sigma-54 interaction domain VCSRO45_1566 PF05128 Domain of unknown function (DUF697) VCSRO45_1567 PF04317 YcjX-like family, DUF463 VCSRO45_1570 PF00425 chorismate binding enzyme VCSRO45_1570 PF04715 Anthranilate synthase component I, N terminal region VCSRO45_1571 PF00293 NUDIX domain VCSRO45_1572 PF03222 Tryptophan/tyrosine permease family VCSRO45_1573 PF03315 Serine dehydratase beta chain VCSRO45_1573 PF03313 Serine dehydratase alpha chain VCSRO45_1574 PF01242 6-pyruvoyl tetrahydropterin synthase VCSRO45_1575 PF00672 HAMP domain VCSRO45_1575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1575 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_1576 PF00152 tRNA synthetases class II (D, K and N) VCSRO45_1576 PF01336 OB-fold nucleic acid binding domain VCSRO45_1577 PF08543 Phosphomethylpyrimidine kinase VCSRO45_1578 PF00672 HAMP domain VCSRO45_1578 PF01966 HD domain VCSRO45_1579 PF00155 Aminotransferase class I and II VCSRO45_1582 PF17200 Single Cache domain 2 VCSRO45_1582 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1582 PF00672 HAMP domain VCSRO45_1583 PF04349 Periplasmic glucan biosynthesis protein, MdoG VCSRO45_1584 PF13506 Glycosyl transferase family 21 VCSRO45_1585 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_1586 PF04794 YdjC-like protein VCSRO45_1587 PF02056 Family 4 glycosyl hydrolase VCSRO45_1587 PF11975 Family 4 glycosyl hydrolase C-terminal domain VCSRO45_1588 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VCSRO45_1589 PF02378 Phosphotransferase system, EIIC VCSRO45_1590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO45_1591 PF01522 Polysaccharide deacetylase VCSRO45_1592 PF02028 BCCT, betaine/carnitine/choline family transporter VCSRO45_1593 PF01047 MarR family VCSRO45_1594 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_1594 PF00072 Response regulator receiver domain VCSRO45_1595 PF07730 Histidine kinase VCSRO45_1595 PF17200 Single Cache domain 2 VCSRO45_1596 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCSRO45_1599 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO45_1603 PF00753 Metallo-beta-lactamase superfamily VCSRO45_1604 PF05951 Bacterial protein of unknown function (DUF882) VCSRO45_1610 PF00925 GTP cyclohydrolase II VCSRO45_1612 PF07690 Major Facilitator Superfamily VCSRO45_1614 PF00581 Rhodanese-like domain VCSRO45_1614 PF17773 UPF0176 acylphosphatase like domain VCSRO45_1615 PF00521 DNA gyrase/topoisomerase IV, subunit A VCSRO45_1615 PF03989 DNA gyrase C-terminal domain, beta-propeller VCSRO45_1617 PF03477 ATP cone domain VCSRO45_1617 PF00317 Ribonucleotide reductase, all-alpha domain VCSRO45_1617 PF02867 Ribonucleotide reductase, barrel domain VCSRO45_1618 PF00268 Ribonucleotide reductase, small chain VCSRO45_1619 PF00970 Oxidoreductase FAD-binding domain VCSRO45_1619 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO45_1619 PF00175 Oxidoreductase NAD-binding domain VCSRO45_1621 PF00994 Probable molybdopterin binding domain VCSRO45_1624 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_1624 PF00672 HAMP domain VCSRO45_1624 PF17200 Single Cache domain 2 VCSRO45_1627 PF00005 ABC transporter VCSRO45_1628 PF01032 FecCD transport family VCSRO45_1629 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VCSRO45_1632 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VCSRO45_1633 PF02654 Cobalamin-5-phosphate synthase VCSRO45_1634 PF02277 Phosphoribosyltransferase VCSRO45_1635 PF01641 SelR domain VCSRO45_1636 PF00375 Sodium:dicarboxylate symporter family VCSRO45_1637 PF00929 Exonuclease VCSRO45_1637 PF08411 Exonuclease C-terminal VCSRO45_1638 PF03788 LrgA family VCSRO45_1639 PF04172 LrgB-like family VCSRO45_1640 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO45_1640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO45_1642 PF02222 ATP-grasp domain VCSRO45_1643 PF01797 Transposase IS200 like VCSRO45_1644 PF05724 Thiopurine S-methyltransferase (TPMT) VCSRO45_1647 PF00216 Bacterial DNA-binding protein VCSRO45_1648 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VCSRO45_1648 PF03483 B3/4 domain VCSRO45_1648 PF03484 tRNA synthetase B5 domain VCSRO45_1648 PF03147 Ferredoxin-fold anticodon binding domain VCSRO45_1648 PF01588 Putative tRNA binding domain VCSRO45_1649 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VCSRO45_1649 PF01409 tRNA synthetases class II core domain (F) VCSRO45_1651 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1651 PF00072 Response regulator receiver domain VCSRO45_1656 PF01066 CDP-alcohol phosphatidyltransferase VCSRO45_1657 PF01541 GIY-YIG catalytic domain VCSRO45_1657 PF02151 UvrB/uvrC motif VCSRO45_1657 PF08459 UvrC Helix-hairpin-helix N-terminal VCSRO45_1658 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_1658 PF00072 Response regulator receiver domain VCSRO45_1659 PF00136 DNA polymerase family B VCSRO45_1659 PF03104 DNA polymerase family B, exonuclease domain VCSRO45_1660 PF00563 EAL domain VCSRO45_1660 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1660 PF13426 PAS domain VCSRO45_1662 PF09285 Elongation factor P, C-terminal VCSRO45_1662 PF08207 Elongation factor P (EF-P) KOW-like domain VCSRO45_1662 PF01132 Elongation factor P (EF-P) OB domain VCSRO45_1663 PF04269 Protein of unknown function, DUF440 VCSRO45_1665 PF00392 Bacterial regulatory proteins, gntR family VCSRO45_1665 PF07702 UTRA domain VCSRO45_1666 PF01979 Amidohydrolase family VCSRO45_1667 PF00491 Arginase family VCSRO45_1668 PF17392 Urocanase C-terminal domain VCSRO45_1668 PF17391 Urocanase N-terminal domain VCSRO45_1668 PF01175 Urocanase Rossmann-like domain VCSRO45_1669 PF00221 Aromatic amino acid lyase VCSRO45_1671 PF00089 Trypsin VCSRO45_1672 PF04191 Phospholipid methyltransferase VCSRO45_1673 PF13183 4Fe-4S dicluster domain VCSRO45_1673 PF01565 FAD binding domain VCSRO45_1673 PF02913 FAD linked oxidases, C-terminal domain VCSRO45_1676 PF00691 OmpA family VCSRO45_1676 PF13488 Glycine zipper VCSRO45_1680 PF01259 SAICAR synthetase VCSRO45_1682 PF00390 Malic enzyme, N-terminal domain VCSRO45_1682 PF03949 Malic enzyme, NAD binding domain VCSRO45_1684 PF02698 DUF218 domain VCSRO45_1685 PF08448 PAS fold VCSRO45_1685 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1686 PF00266 Aminotransferase class-V VCSRO45_1688 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_1689 PF00664 ABC transporter transmembrane region VCSRO45_1689 PF00005 ABC transporter VCSRO45_1690 PF00664 ABC transporter transmembrane region VCSRO45_1690 PF00005 ABC transporter VCSRO45_1691 PF00849 RNA pseudouridylate synthase VCSRO45_1691 PF01479 S4 domain VCSRO45_1692 PF01300 Telomere recombination VCSRO45_1693 PF02811 PHP domain VCSRO45_1694 PF04715 Anthranilate synthase component I, N terminal region VCSRO45_1694 PF00425 chorismate binding enzyme VCSRO45_1695 PF00117 Glutamine amidotransferase class-I VCSRO45_1696 PF02885 Glycosyl transferase family, helical bundle domain VCSRO45_1696 PF00591 Glycosyl transferase family, a/b domain VCSRO45_1697 PF00218 Indole-3-glycerol phosphate synthase VCSRO45_1697 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VCSRO45_1698 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO45_1699 PF00290 Tryptophan synthase alpha chain VCSRO45_1700 PF00375 Sodium:dicarboxylate symporter family VCSRO45_1701 PF00265 Thymidine kinase VCSRO45_1702 PF01336 OB-fold nucleic acid binding domain VCSRO45_1702 PF00152 tRNA synthetases class II (D, K and N) VCSRO45_1702 PF02938 GAD domain VCSRO45_1703 PF01904 Protein of unknown function DUF72 VCSRO45_1704 PF13649 Methyltransferase domain VCSRO45_1705 PF08003 Protein of unknown function (DUF1698) VCSRO45_1706 PF08443 RimK-like ATP-grasp domain VCSRO45_1706 PF18030 RimK PreATP-grasp domain VCSRO45_1709 PF00266 Aminotransferase class-V VCSRO45_1711 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1711 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1711 PF00989 PAS fold VCSRO45_1714 PF04994 TfoX C-terminal domain VCSRO45_1714 PF04993 TfoX N-terminal domain VCSRO45_1716 PF03956 Lysine exporter LysO VCSRO45_1718 PF00282 Pyridoxal-dependent decarboxylase conserved domain VCSRO45_1719 PF01380 SIS domain VCSRO45_1719 PF01418 Helix-turn-helix domain, rpiR family VCSRO45_1720 PF00465 Iron-containing alcohol dehydrogenase VCSRO45_1720 PF00171 Aldehyde dehydrogenase family VCSRO45_1721 PF00462 Glutaredoxin VCSRO45_1722 PF02080 TrkA-C domain VCSRO45_1722 PF06826 Predicted Permease Membrane Region VCSRO45_1723 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO45_1723 PF07724 AAA domain (Cdc48 subfamily) VCSRO45_1723 PF17871 AAA lid domain VCSRO45_1723 PF02861 Clp amino terminal domain, pathogenicity island component VCSRO45_1723 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO45_1724 PF02617 ATP-dependent Clp protease adaptor protein ClpS VCSRO45_1725 PF00313 'Cold-shock' DNA-binding domain VCSRO45_1726 PF03971 Monomeric isocitrate dehydrogenase VCSRO45_1727 PF00849 RNA pseudouridylate synthase VCSRO45_1728 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VCSRO45_1728 PF01502 Phosphoribosyl-AMP cyclohydrolase VCSRO45_1729 PF00977 Histidine biosynthesis protein VCSRO45_1730 PF00977 Histidine biosynthesis protein VCSRO45_1731 PF00117 Glutamine amidotransferase class-I VCSRO45_1732 PF00475 Imidazoleglycerol-phosphate dehydratase VCSRO45_1732 PF08645 Polynucleotide kinase 3 phosphatase VCSRO45_1733 PF00155 Aminotransferase class I and II VCSRO45_1734 PF00815 Histidinol dehydrogenase VCSRO45_1735 PF08029 HisG, C-terminal domain VCSRO45_1735 PF01634 ATP phosphoribosyltransferase VCSRO45_1736 PF03553 Na+/H+ antiporter family VCSRO45_1737 PF00816 H-NS histone family VCSRO45_1738 PF00294 pfkB family carbohydrate kinase VCSRO45_1740 PF04356 Protein of unknown function (DUF489) VCSRO45_1741 PF08328 Adenylosuccinate lyase C-terminal VCSRO45_1741 PF00206 Lyase VCSRO45_1743 PF16036 Chalcone isomerase-like VCSRO45_1748 PF00106 short chain dehydrogenase VCSRO45_1750 PF01435 Peptidase family M48 VCSRO45_1753 PF08241 Methyltransferase domain VCSRO45_1754 PF00155 Aminotransferase class I and II VCSRO45_1755 PF06968 Biotin and Thiamin Synthesis associated domain VCSRO45_1755 PF04055 Radical SAM superfamily VCSRO45_1756 PF00202 Aminotransferase class-III VCSRO45_1757 PF02403 Seryl-tRNA synthetase N-terminal domain VCSRO45_1757 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO45_1758 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO45_1758 PF16193 AAA C-terminal domain VCSRO45_1758 PF12002 MgsA AAA+ ATPase C terminal VCSRO45_1759 PF03548 Outer membrane lipoprotein carrier protein LolA VCSRO45_1760 PF02810 SEC-C motif VCSRO45_1760 PF01043 SecA preprotein cross-linking domain VCSRO45_1760 PF07516 SecA Wing and Scaffold domain VCSRO45_1760 PF07517 SecA DEAD-like domain VCSRO45_1761 PF01207 Dihydrouridine synthase (Dus) VCSRO45_1762 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1763 PF00005 ABC transporter VCSRO45_1764 PF02653 Branched-chain amino acid transport system / permease component VCSRO45_1766 PF09905 DNA-binding protein VF530 VCSRO45_1767 PF04217 Protein of unknown function, DUF412 VCSRO45_1768 PF00871 Acetokinase family VCSRO45_1769 PF07085 DRTGG domain VCSRO45_1769 PF01515 Phosphate acetyl/butaryl transferase VCSRO45_1770 PF13409 Glutathione S-transferase, N-terminal domain VCSRO45_1771 PF00005 ABC transporter VCSRO45_1771 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_1772 PF00005 ABC transporter VCSRO45_1772 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_1773 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO45_1773 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1774 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO45_1777 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1777 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1777 PF00072 Response regulator receiver domain VCSRO45_1777 PF13188 PAS domain VCSRO45_1777 PF08448 PAS fold VCSRO45_1778 PF02954 Bacterial regulatory protein, Fis family VCSRO45_1778 PF00072 Response regulator receiver domain VCSRO45_1778 PF00158 Sigma-54 interaction domain VCSRO45_1779 PF00563 EAL domain VCSRO45_1779 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1779 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_1779 PF13188 PAS domain VCSRO45_1780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1780 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1781 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_1781 PF00989 PAS fold VCSRO45_1781 PF13188 PAS domain VCSRO45_1781 PF13426 PAS domain VCSRO45_1783 PF00072 Response regulator receiver domain VCSRO45_1786 PF03481 Putative GTP-binding controlling metal-binding VCSRO45_1786 PF01300 Telomere recombination VCSRO45_1789 PF01161 Phosphatidylethanolamine-binding protein VCSRO45_1792 PF00704 Glycosyl hydrolases family 18 VCSRO45_1792 PF06483 Chitinase C VCSRO45_1795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO45_1795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO45_1796 PF01022 Bacterial regulatory protein, arsR family VCSRO45_1797 PF08448 PAS fold VCSRO45_1797 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1799 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VCSRO45_1802 PF01037 Lrp/AsnC ligand binding domain VCSRO45_1802 PF13404 AsnC-type helix-turn-helix domain VCSRO45_1803 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO45_1804 PF08496 Peptidase family S49 N-terminal VCSRO45_1804 PF01343 Peptidase family S49 VCSRO45_1805 PF00106 short chain dehydrogenase VCSRO45_1808 PF03692 Putative zinc- or iron-chelating domain VCSRO45_1809 PF03692 Putative zinc- or iron-chelating domain VCSRO45_1810 PF02132 RecR protein VCSRO45_1810 PF13662 Toprim domain VCSRO45_1811 PF02575 YbaB/EbfC DNA-binding family VCSRO45_1812 PF12169 DNA polymerase III subunits gamma and tau domain III VCSRO45_1812 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VCSRO45_1812 PF12170 DNA polymerase III tau subunit V interacting with alpha VCSRO45_1813 PF00156 Phosphoribosyl transferase domain VCSRO45_1814 PF04304 Protein of unknown function (DUF454) VCSRO45_1816 PF00072 Response regulator receiver domain VCSRO45_1817 PF03466 LysR substrate binding domain VCSRO45_1817 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1818 PF00881 Nitroreductase family VCSRO45_1819 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VCSRO45_1819 PF00378 Enoyl-CoA hydratase/isomerase VCSRO45_1819 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VCSRO45_1820 PF02803 Thiolase, C-terminal domain VCSRO45_1820 PF00108 Thiolase, N-terminal domain VCSRO45_1821 PF04542 Sigma-70 region 2 VCSRO45_1821 PF08281 Sigma-70, region 4 VCSRO45_1823 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO45_1824 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO45_1825 PF01451 Low molecular weight phosphotyrosine protein phosphatase VCSRO45_1826 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VCSRO45_1826 PF12557 Cob(I)alamin adenosyltransferase N terminal VCSRO45_1827 PF05170 AsmA family VCSRO45_1828 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO45_1829 PF10609 NUBPL iron-transfer P-loop NTPase VCSRO45_1830 PF01588 Putative tRNA binding domain VCSRO45_1830 PF09334 tRNA synthetases class I (M) VCSRO45_1832 PF01048 Phosphorylase superfamily VCSRO45_1833 PF01048 Phosphorylase superfamily VCSRO45_1834 PF00403 Heavy-metal-associated domain VCSRO45_1835 PF00571 CBS domain VCSRO45_1835 PF01743 Poly A polymerase head domain VCSRO45_1836 PF07694 5TMR of 5TMR-LYT VCSRO45_1836 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1837 PF02391 MoaE protein VCSRO45_1838 PF02597 ThiS family VCSRO45_1839 PF01967 MoaC family VCSRO45_1840 PF00994 Probable molybdopterin binding domain VCSRO45_1841 PF06463 Molybdenum Cofactor Synthesis C VCSRO45_1841 PF04055 Radical SAM superfamily VCSRO45_1842 PF01933 Uncharacterised protein family UPF0052 VCSRO45_1843 PF01627 Hpt domain VCSRO45_1844 PF02954 Bacterial regulatory protein, Fis family VCSRO45_1844 PF00072 Response regulator receiver domain VCSRO45_1844 PF00158 Sigma-54 interaction domain VCSRO45_1845 PF00271 Helicase conserved C-terminal domain VCSRO45_1845 PF04851 Type III restriction enzyme, res subunit VCSRO45_1845 PF02151 UvrB/uvrC motif VCSRO45_1845 PF12344 Ultra-violet resistance protein B VCSRO45_1845 PF17757 UvrB interaction domain VCSRO45_1847 PF02508 Rnf-Nqr subunit, membrane protein VCSRO45_1848 PF04060 Putative Fe-S cluster VCSRO45_1849 PF10531 SLBB domain VCSRO45_1849 PF12838 4Fe-4S dicluster domain VCSRO45_1849 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VCSRO45_1849 PF13375 RnfC Barrel sandwich hybrid domain VCSRO45_1850 PF03116 NQR2, RnfD, RnfE family VCSRO45_1851 PF04205 FMN-binding domain VCSRO45_1852 PF02508 Rnf-Nqr subunit, membrane protein VCSRO45_1853 PF10576 Iron-sulfur binding domain of endonuclease III VCSRO45_1853 PF00633 Helix-hairpin-helix motif VCSRO45_1853 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO45_1854 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO45_1855 PF10952 Protein of unknown function (DUF2753) VCSRO45_1856 PF18393 MotY N-terminal domain VCSRO45_1856 PF00691 OmpA family VCSRO45_1857 PF00929 Exonuclease VCSRO45_1858 PF03553 Na+/H+ antiporter family VCSRO45_1858 PF13726 Na+-H+ antiporter family VCSRO45_1859 PF00156 Phosphoribosyl transferase domain VCSRO45_1860 PF02674 Colicin V production protein VCSRO45_1861 PF05036 Sporulation related domain VCSRO45_1862 PF02875 Mur ligase family, glutamate ligase domain VCSRO45_1862 PF08245 Mur ligase middle domain VCSRO45_1863 PF01039 Carboxyl transferase domain VCSRO45_1863 PF17848 Acetyl-coA carboxylase zinc finger domain VCSRO45_1864 PF01416 tRNA pseudouridine synthase VCSRO45_1866 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VCSRO45_1866 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO45_1867 PF00367 phosphotransferase system, EIIB VCSRO45_1867 PF02378 Phosphotransferase system, EIIC VCSRO45_1867 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCSRO45_1868 PF01979 Amidohydrolase family VCSRO45_1869 PF00480 ROK family VCSRO45_1869 PF01047 MarR family VCSRO45_1870 PF00999 Sodium/hydrogen exchanger family VCSRO45_1870 PF02254 TrkA-N domain VCSRO45_1871 PF00733 Asparagine synthase VCSRO45_1871 PF13537 Glutamine amidotransferase domain VCSRO45_1872 PF02357 Transcription termination factor nusG VCSRO45_1873 PF00854 POT family VCSRO45_1874 PF00762 Ferrochelatase VCSRO45_1875 PF05191 Adenylate kinase, active site lid VCSRO45_1876 PF00183 Hsp90 protein VCSRO45_1876 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_1877 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_1878 PF17323 Trans-membrane regulatory protein ToxS VCSRO45_1880 PF12850 Calcineurin-like phosphoesterase superfamily domain VCSRO45_1881 PF08338 Domain of unknown function (DUF1731) VCSRO45_1881 PF01370 NAD dependent epimerase/dehydratase family VCSRO45_1882 PF00106 short chain dehydrogenase VCSRO45_1883 PF00085 Thioredoxin VCSRO45_1885 PF16200 C-terminal region of band_7 VCSRO45_1885 PF01145 SPFH domain / Band 7 family VCSRO45_1886 PF01957 NfeD-like C-terminal, partner-binding VCSRO45_1887 PF13411 MerR HTH family regulatory protein VCSRO45_1888 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO45_1890 PF03120 NAD-dependent DNA ligase OB-fold domain VCSRO45_1890 PF12826 Helix-hairpin-helix motif VCSRO45_1890 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VCSRO45_1890 PF00533 BRCA1 C Terminus (BRCT) domain VCSRO45_1890 PF01653 NAD-dependent DNA ligase adenylation domain VCSRO45_1891 PF04354 ZipA, C-terminal FtsZ-binding domain VCSRO45_1893 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO45_1894 PF00381 PTS HPr component phosphorylation site VCSRO45_1895 PF05524 PEP-utilising enzyme, N-terminal VCSRO45_1895 PF00391 PEP-utilising enzyme, mobile domain VCSRO45_1895 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO45_1896 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCSRO45_1897 PF01494 FAD binding domain VCSRO45_1898 PF00919 Uncharacterized protein family UPF0004 VCSRO45_1898 PF01938 TRAM domain VCSRO45_1898 PF04055 Radical SAM superfamily VCSRO45_1899 PF02562 PhoH-like protein VCSRO45_1900 PF02130 Uncharacterized protein family UPF0054 VCSRO45_1901 PF00571 CBS domain VCSRO45_1901 PF03471 Transporter associated domain VCSRO45_1902 PF00795 Carbon-nitrogen hydrolase VCSRO45_1903 PF07295 Zinc-ribbon containing domain VCSRO45_1904 PF08264 Anticodon-binding domain of tRNA VCSRO45_1904 PF13603 Leucyl-tRNA synthetase, Domain 2 VCSRO45_1904 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO45_1905 PF04390 Lipopolysaccharide-assembly VCSRO45_1906 PF06144 DNA polymerase III, delta subunit VCSRO45_1906 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VCSRO45_1908 PF02590 Predicted SPOUT methyltransferase VCSRO45_1909 PF00905 Penicillin binding protein transpeptidase domain VCSRO45_1909 PF03717 Penicillin-binding Protein dimerisation domain VCSRO45_1910 PF01098 Cell cycle protein VCSRO45_1911 PF05036 Sporulation related domain VCSRO45_1911 PF03330 Lytic transglycolase VCSRO45_1912 PF07943 Penicillin-binding protein 5, C-terminal domain VCSRO45_1912 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO45_1913 PF04359 Protein of unknown function (DUF493) VCSRO45_1914 PF03099 Biotin/lipoate A/B protein ligase family VCSRO45_1915 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VCSRO45_1915 PF04055 Radical SAM superfamily VCSRO45_1917 PF00464 Serine hydroxymethyltransferase VCSRO45_1921 PF13807 G-rich domain on putative tyrosine kinase VCSRO45_1921 PF13614 AAA domain VCSRO45_1921 PF02706 Chain length determinant protein VCSRO45_1922 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VCSRO45_1922 PF10531 SLBB domain VCSRO45_1922 PF02563 Polysaccharide biosynthesis/export protein VCSRO45_1924 PF02397 Bacterial sugar transferase VCSRO45_1927 PF01797 Transposase IS200 like VCSRO45_1928 PF17945 Beta/Gamma crystallin VCSRO45_1928 PF12561 ToxR activated gene A lipoprotein domain VCSRO45_1931 PF03808 Glycosyl transferase WecB/TagA/CpsF family VCSRO45_1933 PF13439 Glycosyltransferase Family 4 VCSRO45_1933 PF00534 Glycosyl transferases group 1 VCSRO45_1939 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VCSRO45_1939 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VCSRO45_1939 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VCSRO45_1940 PF02350 UDP-N-acetylglucosamine 2-epimerase VCSRO45_1941 PF01451 Low molecular weight phosphotyrosine protein phosphatase VCSRO45_1942 PF00873 AcrB/AcrD/AcrF family VCSRO45_1943 PF13533 Biotin-lipoyl like VCSRO45_1947 PF00128 Alpha amylase, catalytic domain VCSRO45_1947 PF16657 Maltogenic Amylase, C-terminal domain VCSRO45_1948 PF00367 phosphotransferase system, EIIB VCSRO45_1948 PF02378 Phosphotransferase system, EIIC VCSRO45_1949 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_1951 PF00005 ABC transporter VCSRO45_1951 PF09383 NIL domain VCSRO45_1952 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_1953 PF03180 NLPA lipoprotein VCSRO45_1954 PF13006 Insertion element 4 transposase N-terminal VCSRO45_1954 PF01609 Transposase DDE domain VCSRO45_1955 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VCSRO45_1956 PF07348 Syd protein (SUKH-2) VCSRO45_1957 PF14489 QueF-like protein VCSRO45_1957 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VCSRO45_1959 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_1960 PF11892 Domain of unknown function (DUF3412) VCSRO45_1960 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VCSRO45_1960 PF03641 Possible lysine decarboxylase VCSRO45_1961 PF01367 5'-3' exonuclease, C-terminal SAM fold VCSRO45_1961 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VCSRO45_1962 PF04241 Protein of unknown function (DUF423) VCSRO45_1963 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_1963 PF03466 LysR substrate binding domain VCSRO45_1964 PF02568 Thiamine biosynthesis protein (ThiI) VCSRO45_1964 PF02926 THUMP domain VCSRO45_1965 PF00691 OmpA family VCSRO45_1965 PF13677 Membrane MotB of proton-channel complex MotA/MotB VCSRO45_1966 PF01618 MotA/TolQ/ExbB proton channel family VCSRO45_1967 PF02609 Exonuclease VII small subunit VCSRO45_1968 PF00348 Polyprenyl synthetase VCSRO45_1969 PF02780 Transketolase, C-terminal domain VCSRO45_1969 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VCSRO45_1969 PF02779 Transketolase, pyrimidine binding domain VCSRO45_1970 PF00849 RNA pseudouridylate synthase VCSRO45_1971 PF04287 tRNA pseudouridine synthase C VCSRO45_1974 PF13302 Acetyltransferase (GNAT) domain VCSRO45_1976 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VCSRO45_1977 PF03806 AbgT putative transporter family VCSRO45_1978 PF00444 Ribosomal protein L36 VCSRO45_1979 PF01197 Ribosomal protein L31 VCSRO45_1980 PF18389 TrmO C-terminal domain VCSRO45_1980 PF01980 tRNA-methyltransferase O VCSRO45_1981 PF04073 Aminoacyl-tRNA editing domain VCSRO45_1981 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO45_1981 PF03129 Anticodon binding domain VCSRO45_1983 PF06786 Uncharacterised protein family (UPF0253) VCSRO45_1985 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VCSRO45_1985 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VCSRO45_1985 PF02769 AIR synthase related protein, C-terminal domain VCSRO45_1986 PF01464 Transglycosylase SLT domain VCSRO45_1986 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO45_1988 PF14437 MafB19-like deaminase VCSRO45_1989 PF03806 AbgT putative transporter family VCSRO45_1994 PF07963 Prokaryotic N-terminal methylation motif VCSRO45_1994 PF00114 Pilin (bacterial filament) VCSRO45_1995 PF00684 DnaJ central domain VCSRO45_1995 PF01556 DnaJ C terminal domain VCSRO45_1995 PF00226 DnaJ domain VCSRO45_1996 PF00012 Hsp70 protein VCSRO45_1997 PF01025 GrpE VCSRO45_1998 PF01513 ATP-NAD kinase VCSRO45_1999 PF02463 RecF/RecN/SMC N terminal domain VCSRO45_2000 PF04355 SmpA / OmlA family VCSRO45_2001 PF03658 RnfH family Ubiquitin VCSRO45_2002 PF03364 Polyketide cyclase / dehydrase and lipid transport VCSRO45_2003 PF01668 SmpB protein VCSRO45_2005 PF00589 Phage integrase family VCSRO45_2005 PF13356 Arm DNA-binding domain VCSRO45_2009 PF00665 Integrase core domain VCSRO45_2010 PF01527 Transposase VCSRO45_2013 PF00665 Integrase core domain VCSRO45_2014 PF01527 Transposase VCSRO45_2016 PF01555 DNA methylase VCSRO45_2017 PF13361 UvrD-like helicase C-terminal domain VCSRO45_2017 PF00580 UvrD/REP helicase N-terminal domain VCSRO45_2020 PF05638 Type VI secretion system effector, Hcp VCSRO45_2021 PF04717 Type VI secretion system, phage-baseplate injector VCSRO45_2034 PF00665 Integrase core domain VCSRO45_2035 PF01527 Transposase VCSRO45_2037 PF04002 RadC-like JAB domain VCSRO45_2049 PF00271 Helicase conserved C-terminal domain VCSRO45_2049 PF04851 Type III restriction enzyme, res subunit VCSRO45_2053 PF11953 Domain of unknown function (DUF3470) VCSRO45_2053 PF00037 4Fe-4S binding domain VCSRO45_2054 PF08032 RNA 2'-O ribose methyltransferase substrate binding VCSRO45_2054 PF00588 SpoU rRNA Methylase family VCSRO45_2056 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VCSRO45_2057 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VCSRO45_2058 PF04223 Citrate lyase, alpha subunit (CitF) VCSRO45_2059 PF03328 HpcH/HpaI aldolase/citrate lyase family VCSRO45_2060 PF06857 Malonate decarboxylase delta subunit (MdcD) VCSRO45_2061 PF08218 Citrate lyase ligase C-terminal domain VCSRO45_2062 PF03390 2-hydroxycarboxylate transporter family VCSRO45_2063 PF04277 Oxaloacetate decarboxylase, gamma chain VCSRO45_2064 PF00364 Biotin-requiring enzyme VCSRO45_2064 PF02436 Conserved carboxylase domain VCSRO45_2064 PF00682 HMGL-like VCSRO45_2065 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VCSRO45_2066 PF17203 Single cache domain 3 VCSRO45_2066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_2067 PF00072 Response regulator receiver domain VCSRO45_2067 PF12431 Transcriptional regulator VCSRO45_2070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_2070 PF03466 LysR substrate binding domain VCSRO45_2071 PF01266 FAD dependent oxidoreductase VCSRO45_2072 PF01235 Sodium:alanine symporter family VCSRO45_2073 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VCSRO45_2073 PF01648 4'-phosphopantetheinyl transferase superfamily VCSRO45_2074 PF00005 ABC transporter VCSRO45_2075 PF01032 FecCD transport family VCSRO45_2076 PF01032 FecCD transport family VCSRO45_2077 PF01497 Periplasmic binding protein VCSRO45_2080 PF00425 chorismate binding enzyme VCSRO45_2081 PF00501 AMP-binding enzyme VCSRO45_2081 PF13193 AMP-binding enzyme C-terminal domain VCSRO45_2082 PF00857 Isochorismatase family VCSRO45_2082 PF00550 Phosphopantetheine attachment site VCSRO45_2083 PF01184 GPR1/FUN34/yaaH family VCSRO45_2084 PF06483 Chitinase C VCSRO45_2084 PF00704 Glycosyl hydrolases family 18 VCSRO45_2085 PF02540 NAD synthase VCSRO45_2085 PF00958 GMP synthase C terminal domain VCSRO45_2085 PF00117 Glutamine amidotransferase class-I VCSRO45_2086 PF00571 CBS domain VCSRO45_2086 PF00478 IMP dehydrogenase / GMP reductase domain VCSRO45_2087 PF13742 OB-fold nucleic acid binding domain VCSRO45_2087 PF02601 Exonuclease VII, large subunit VCSRO45_2090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VCSRO45_2090 PF01926 50S ribosome-binding GTPase VCSRO45_2091 PF13360 PQQ-like domain VCSRO45_2092 PF09976 Tetratricopeptide repeat-like domain VCSRO45_2093 PF13393 Histidyl-tRNA synthetase VCSRO45_2093 PF03129 Anticodon binding domain VCSRO45_2094 PF04551 GcpE protein VCSRO45_2095 PF13464 Domain of unknown function (DUF4115) VCSRO45_2096 PF04055 Radical SAM superfamily VCSRO45_2097 PF00334 Nucleoside diphosphate kinase VCSRO45_2098 PF00883 Cytosol aminopeptidase family, catalytic domain VCSRO45_2098 PF12404 Peptidase VCSRO45_2099 PF04384 Iron-sulphur cluster assembly VCSRO45_2100 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO45_2101 PF00012 Hsp70 protein VCSRO45_2102 PF00226 DnaJ domain VCSRO45_2102 PF07743 HSCB C-terminal oligomerisation domain VCSRO45_2103 PF01521 Iron-sulphur cluster biosynthesis VCSRO45_2104 PF01592 NifU-like N terminal domain VCSRO45_2105 PF00266 Aminotransferase class-V VCSRO45_2106 PF02082 Transcriptional regulator VCSRO45_2107 PF00588 SpoU rRNA Methylase family VCSRO45_2108 PF00459 Inositol monophosphatase family VCSRO45_2109 PF01609 Transposase DDE domain VCSRO45_2109 PF13006 Insertion element 4 transposase N-terminal VCSRO45_2110 PF07549 SecD/SecF GG Motif VCSRO45_2110 PF02355 Protein export membrane protein VCSRO45_2111 PF07549 SecD/SecF GG Motif VCSRO45_2111 PF13721 SecD export protein N-terminal TM region VCSRO45_2111 PF02355 Protein export membrane protein VCSRO45_2112 PF02699 Preprotein translocase subunit VCSRO45_2113 PF01702 Queuine tRNA-ribosyltransferase VCSRO45_2114 PF02547 Queuosine biosynthesis protein VCSRO45_2115 PF00571 CBS domain VCSRO45_2116 PF00463 Isocitrate lyase family VCSRO45_2117 PF01274 Malate synthase VCSRO45_2118 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_2118 PF03466 LysR substrate binding domain VCSRO45_2119 PF00578 AhpC/TSA family VCSRO45_2119 PF10417 C-terminal domain of 1-Cys peroxiredoxin VCSRO45_2120 PF03932 CutC family VCSRO45_2121 PF03976 Polyphosphate kinase 2 (PPK2) VCSRO45_2122 PF01895 PhoU domain VCSRO45_2123 PF00005 ABC transporter VCSRO45_2124 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2125 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2126 PF02503 Polyphosphate kinase middle domain VCSRO45_2126 PF17941 Polyphosphate kinase C-terminal domain 1 VCSRO45_2126 PF13089 Polyphosphate kinase N-terminal domain VCSRO45_2126 PF13090 Polyphosphate kinase C-terminal domain 2 VCSRO45_2127 PF02541 Ppx/GppA phosphatase family VCSRO45_2128 PF12849 PBP superfamily domain VCSRO45_2129 PF00989 PAS fold VCSRO45_2129 PF11808 Phosphate regulon sensor protein PhoR VCSRO45_2129 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_2129 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_2130 PF00072 Response regulator receiver domain VCSRO45_2130 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_2131 PF04381 Putative exonuclease, RdgC VCSRO45_2132 PF01136 Peptidase family U32 VCSRO45_2132 PF16325 Peptidase family U32 C-terminal domain VCSRO45_2133 PF00037 4Fe-4S binding domain VCSRO45_2134 PF00881 Nitroreductase family VCSRO45_2141 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO45_2141 PF07724 AAA domain (Cdc48 subfamily) VCSRO45_2141 PF17871 AAA lid domain VCSRO45_2141 PF02861 Clp amino terminal domain, pathogenicity island component VCSRO45_2141 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO45_2142 PF02578 Multi-copper polyphenol oxidoreductase laccase VCSRO45_2143 PF00849 RNA pseudouridylate synthase VCSRO45_2143 PF01479 S4 domain VCSRO45_2144 PF13525 Outer membrane lipoprotein VCSRO45_2145 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VCSRO45_2146 PF00800 Prephenate dehydratase VCSRO45_2146 PF01817 Chorismate mutase type II VCSRO45_2147 PF13416 Bacterial extracellular solute-binding protein VCSRO45_2148 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2148 PF00563 EAL domain VCSRO45_2149 PF01931 Protein of unknown function DUF84 VCSRO45_2150 PF01371 Trp repressor protein VCSRO45_2151 PF01464 Transglycosylase SLT domain VCSRO45_2151 PF14718 Soluble lytic murein transglycosylase L domain VCSRO45_2152 PF00005 ABC transporter VCSRO45_2152 PF12848 ABC transporter VCSRO45_2153 PF07238 PilZ domain VCSRO45_2154 PF01817 Chorismate mutase type II VCSRO45_2154 PF02153 Prephenate dehydrogenase VCSRO45_2155 PF00793 DAHP synthetase I family VCSRO45_2156 PF06580 Histidine kinase VCSRO45_2156 PF07694 5TMR of 5TMR-LYT VCSRO45_2157 PF04397 LytTr DNA-binding domain VCSRO45_2157 PF00072 Response regulator receiver domain VCSRO45_2158 PF00933 Glycosyl hydrolase family 3 N terminal domain VCSRO45_2159 PF03702 Anhydro-N-acetylmuramic acid kinase VCSRO45_2160 PF13580 SIS domain VCSRO45_2162 PF02554 Carbon starvation protein CstA VCSRO45_2163 PF02401 LytB protein VCSRO45_2164 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO45_2165 PF01252 Signal peptidase (SPase) II VCSRO45_2166 PF08264 Anticodon-binding domain of tRNA VCSRO45_2166 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO45_2166 PF06827 Zinc finger found in FPG and IleRS VCSRO45_2167 PF01687 Riboflavin kinase VCSRO45_2167 PF06574 FAD synthetase VCSRO45_2168 PF03023 Lipid II flippase MurJ VCSRO45_2169 PF01649 Ribosomal protein S20 VCSRO45_2170 PF01022 Bacterial regulatory protein, arsR family VCSRO45_2171 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_2171 PF03466 LysR substrate binding domain VCSRO45_2172 PF02690 Na+/Pi-cotransporter VCSRO45_2173 PF00303 Thymidylate synthase VCSRO45_2174 PF01790 Prolipoprotein diacylglyceryl transferase VCSRO45_2175 PF01925 Sulfite exporter TauE/SafE VCSRO45_2176 PF01590 GAF domain VCSRO45_2176 PF05524 PEP-utilising enzyme, N-terminal VCSRO45_2176 PF00391 PEP-utilising enzyme, mobile domain VCSRO45_2176 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO45_2177 PF00293 NUDIX domain VCSRO45_2178 PF02976 DNA mismatch repair enzyme MutH VCSRO45_2179 PF00248 Aldo/keto reductase family VCSRO45_2181 PF00158 Sigma-54 interaction domain VCSRO45_2181 PF02954 Bacterial regulatory protein, Fis family VCSRO45_2181 PF00072 Response regulator receiver domain VCSRO45_2182 PF01797 Transposase IS200 like VCSRO45_2183 PF01336 OB-fold nucleic acid binding domain VCSRO45_2183 PF00152 tRNA synthetases class II (D, K and N) VCSRO45_2184 PF03462 PCRF domain VCSRO45_2184 PF00472 RF-1 domain VCSRO45_2185 PF05525 Branched-chain amino acid transport protein VCSRO45_2186 PF05175 Methyltransferase small domain VCSRO45_2187 PF00270 DEAD/DEAH box helicase VCSRO45_2187 PF00271 Helicase conserved C-terminal domain VCSRO45_2188 PF00009 Elongation factor Tu GTP binding domain VCSRO45_2188 PF03144 Elongation factor Tu domain 2 VCSRO45_2188 PF16658 Class II release factor RF3, C-terminal domain VCSRO45_2189 PF00563 EAL domain VCSRO45_2189 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_2189 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2192 PF13508 Acetyltransferase (GNAT) domain VCSRO45_2193 PF02036 SCP-2 sterol transfer family VCSRO45_2194 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2194 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_2194 PF00563 EAL domain VCSRO45_2195 PF01136 Peptidase family U32 VCSRO45_2196 PF01136 Peptidase family U32 VCSRO45_2200 PF13181 Tetratricopeptide repeat VCSRO45_2200 PF07719 Tetratricopeptide repeat VCSRO45_2201 PF00013 KH domain VCSRO45_2201 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VCSRO45_2201 PF00575 S1 RNA binding domain VCSRO45_2201 PF03725 3' exoribonuclease family, domain 2 VCSRO45_2201 PF01138 3' exoribonuclease family, domain 1 VCSRO45_2202 PF00312 Ribosomal protein S15 VCSRO45_2203 PF01509 TruB family pseudouridylate synthase (N terminal domain) VCSRO45_2203 PF09157 Pseudouridine synthase II TruB, C-terminal VCSRO45_2203 PF16198 tRNA pseudouridylate synthase B C-terminal domain VCSRO45_2204 PF02033 Ribosome-binding factor A VCSRO45_2205 PF04760 Translation initiation factor IF-2, N-terminal region VCSRO45_2205 PF00009 Elongation factor Tu GTP binding domain VCSRO45_2205 PF11987 Translation-initiation factor 2 VCSRO45_2205 PF08364 Bacterial translation initiation factor IF-2 associated region VCSRO45_2206 PF00575 S1 RNA binding domain VCSRO45_2206 PF08529 NusA N-terminal domain VCSRO45_2206 PF13184 NusA-like KH domain VCSRO45_2207 PF17384 RimP C-terminal SH3 domain VCSRO45_2207 PF02576 RimP N-terminal domain VCSRO45_2210 PF03840 Preprotein translocase SecG subunit VCSRO45_2212 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO45_2212 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO45_2212 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO45_2212 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO45_2213 PF00809 Pterin binding enzyme VCSRO45_2214 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO45_2214 PF17862 AAA+ lid domain VCSRO45_2214 PF01434 Peptidase family M41 VCSRO45_2214 PF06480 FtsH Extracellular VCSRO45_2215 PF01728 FtsJ-like methyltransferase VCSRO45_2216 PF01985 CRS1 / YhbY (CRM) domain VCSRO45_2217 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO45_2217 PF03449 Transcription elongation factor, N-terminal VCSRO45_2218 PF13609 Gram-negative porin VCSRO45_2219 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VCSRO45_2220 PF00579 tRNA synthetases class I (W and Y) VCSRO45_2220 PF01479 S4 domain VCSRO45_2221 PF04225 Opacity-associated protein A LysM-like domain VCSRO45_2221 PF01551 Peptidase family M23 VCSRO45_2222 PF00873 AcrB/AcrD/AcrF family VCSRO45_2224 PF01521 Iron-sulphur cluster biosynthesis VCSRO45_2225 PF00202 Aminotransferase class-III VCSRO45_2227 PF01594 AI-2E family transporter VCSRO45_2228 PF05175 Methyltransferase small domain VCSRO45_2228 PF08468 Methyltransferase small domain N-terminal VCSRO45_2229 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_2229 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_2229 PF00072 Response regulator receiver domain VCSRO45_2229 PF09308 LuxQ, periplasmic VCSRO45_2230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO45_2231 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2232 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO45_2232 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2233 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_2233 PF00005 ABC transporter VCSRO45_2234 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_2234 PF00005 ABC transporter VCSRO45_2236 PF01869 BadF/BadG/BcrA/BcrD ATPase family VCSRO45_2237 PF00728 Glycosyl hydrolase family 20, catalytic domain VCSRO45_2237 PF02838 Glycosyl hydrolase family 20, domain 2 VCSRO45_2238 PF06165 Glycosyltransferase family 36 VCSRO45_2238 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VCSRO45_2239 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO45_2239 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO45_2239 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO45_2239 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO45_2240 PF08402 TOBE domain VCSRO45_2240 PF00005 ABC transporter VCSRO45_2242 PF13416 Bacterial extracellular solute-binding protein VCSRO45_2243 PF00909 Ammonium Transporter Family VCSRO45_2244 PF00543 Nitrogen regulatory protein P-II VCSRO45_2245 PF06062 Uncharacterised protein family (UPF0231) VCSRO45_2246 PF00330 Aconitase family (aconitate hydratase) VCSRO45_2246 PF06434 Aconitate hydratase 2 N-terminus VCSRO45_2246 PF11791 Aconitate B N-terminal domain VCSRO45_2247 PF01734 Patatin-like phospholipase VCSRO45_2248 PF14814 Bifunctional transglycosylase second domain VCSRO45_2248 PF00905 Penicillin binding protein transpeptidase domain VCSRO45_2248 PF00912 Transglycosylase VCSRO45_2249 PF08482 ATP-dependent helicase C-terminal VCSRO45_2249 PF04408 Helicase associated domain (HA2) VCSRO45_2249 PF00270 DEAD/DEAH box helicase VCSRO45_2249 PF00271 Helicase conserved C-terminal domain VCSRO45_2251 PF03749 Sugar fermentation stimulation protein RE domain VCSRO45_2251 PF17746 SfsA N-terminal OB domain VCSRO45_2252 PF01258 Prokaryotic dksA/traR C4-type zinc finger VCSRO45_2253 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO45_2254 PF01743 Poly A polymerase head domain VCSRO45_2254 PF12626 Polymerase A arginine-rich C-terminus VCSRO45_2254 PF12627 Probable RNA and SrmB- binding site of polymerase A VCSRO45_2255 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VCSRO45_2256 PF02548 Ketopantoate hydroxymethyltransferase VCSRO45_2257 PF02569 Pantoate-beta-alanine ligase VCSRO45_2258 PF01061 ABC-2 type transporter VCSRO45_2259 PF00005 ABC transporter VCSRO45_2260 PF01740 STAS domain VCSRO45_2260 PF00916 Sulfate permease family VCSRO45_2261 PF00484 Carbonic anhydrase VCSRO45_2262 PF00156 Phosphoribosyl transferase domain VCSRO45_2263 PF00440 Bacterial regulatory proteins, tetR family VCSRO45_2264 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO45_2265 PF04348 LppC putative lipoprotein VCSRO45_2266 PF02021 Uncharacterised protein family UPF0102 VCSRO45_2267 PF13580 SIS domain VCSRO45_2268 PF04972 BON domain VCSRO45_2269 PF04386 Stringent starvation protein B VCSRO45_2270 PF00043 Glutathione S-transferase, C-terminal domain VCSRO45_2270 PF02798 Glutathione S-transferase, N-terminal domain VCSRO45_2271 PF02167 Cytochrome C1 family VCSRO45_2272 PF00033 Cytochrome b/b6/petB VCSRO45_2272 PF00032 Cytochrome b(C-terminal)/b6/petD VCSRO45_2273 PF00355 Rieske [2Fe-2S] domain VCSRO45_2273 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VCSRO45_2274 PF00380 Ribosomal protein S9/S16 VCSRO45_2275 PF00572 Ribosomal protein L13 VCSRO45_2276 PF03969 AFG1-like ATPase VCSRO45_2278 PF00595 PDZ domain VCSRO45_2279 PF13180 PDZ domain VCSRO45_2280 PF01245 Ribosomal protein L19 VCSRO45_2281 PF01746 tRNA (Guanine-1)-methyltransferase VCSRO45_2282 PF05239 PRC-barrel domain VCSRO45_2282 PF01782 RimM N-terminal domain VCSRO45_2283 PF00886 Ribosomal protein S16 VCSRO45_2284 PF00448 SRP54-type protein, GTPase domain VCSRO45_2284 PF02881 SRP54-type protein, helical bundle domain VCSRO45_2284 PF02978 Signal peptide binding domain VCSRO45_2286 PF01578 Cytochrome C assembly protein VCSRO45_2287 PF01595 Cyclin M transmembrane N-terminal domain VCSRO45_2287 PF03471 Transporter associated domain VCSRO45_2287 PF00571 CBS domain VCSRO45_2288 PF02664 S-Ribosylhomocysteinase (LuxS) VCSRO45_2289 PF04262 Glutamate-cysteine ligase VCSRO45_2290 PF00675 Insulinase (Peptidase family M16) VCSRO45_2290 PF05193 Peptidase M16 inactive domain VCSRO45_2291 PF09335 SNARE associated Golgi protein VCSRO45_2292 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO45_2292 PF00107 Zinc-binding dehydrogenase VCSRO45_2293 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VCSRO45_2294 PF02436 Conserved carboxylase domain VCSRO45_2294 PF00364 Biotin-requiring enzyme VCSRO45_2294 PF00682 HMGL-like VCSRO45_2295 PF04277 Oxaloacetate decarboxylase, gamma chain VCSRO45_2304 PF01797 Transposase IS200 like VCSRO45_2305 PF02599 Global regulator protein family VCSRO45_2306 PF00696 Amino acid kinase family VCSRO45_2306 PF13840 ACT domain VCSRO45_2306 PF01842 ACT domain VCSRO45_2307 PF02272 DHHA1 domain VCSRO45_2307 PF01411 tRNA synthetases class II (A) VCSRO45_2307 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VCSRO45_2308 PF02631 RecX family VCSRO45_2309 PF00154 recA bacterial DNA recombination protein VCSRO45_2310 PF02464 Competence-damaged protein VCSRO45_2311 PF12857 TOBE-like domain VCSRO45_2311 PF00005 ABC transporter VCSRO45_2312 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2313 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2315 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO45_2316 PF05190 MutS family domain IV VCSRO45_2316 PF00488 MutS domain V VCSRO45_2316 PF05188 MutS domain II VCSRO45_2316 PF01624 MutS domain I VCSRO45_2316 PF05192 MutS domain III VCSRO45_2317 PF01797 Transposase IS200 like VCSRO45_2318 PF00140 Sigma-70 factor, region 1.2 VCSRO45_2318 PF04542 Sigma-70 region 2 VCSRO45_2318 PF04539 Sigma-70 region 3 VCSRO45_2318 PF04545 Sigma-70, region 4 VCSRO45_2319 PF01476 LysM domain VCSRO45_2319 PF01551 Peptidase family M23 VCSRO45_2321 PF01975 Survival protein SurE VCSRO45_2322 PF01142 tRNA pseudouridine synthase D (TruD) VCSRO45_2323 PF02542 YgbB family VCSRO45_2324 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VCSRO45_2325 PF04977 Septum formation initiator VCSRO45_2326 PF02673 Bacitracin resistance protein BacA VCSRO45_2327 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VCSRO45_2328 PF02152 Dihydroneopterin aldolase VCSRO45_2329 PF02660 Glycerol-3-phosphate acyltransferase VCSRO45_2331 PF00814 Glycoprotease family VCSRO45_2332 PF01165 Ribosomal protein S21 VCSRO45_2333 PF09424 Yqey-like protein VCSRO45_2334 PF08278 DNA primase DnaG DnaB-binding VCSRO45_2334 PF08275 DNA primase catalytic core, N-terminal domain VCSRO45_2334 PF01807 CHC2 zinc finger VCSRO45_2334 PF10410 DnaB-helicase binding domain of primase VCSRO45_2335 PF04545 Sigma-70, region 4 VCSRO45_2335 PF04539 Sigma-70 region 3 VCSRO45_2335 PF00140 Sigma-70 factor, region 1.2 VCSRO45_2335 PF03979 Sigma-70 factor, region 1.1 VCSRO45_2335 PF04546 Sigma-70, non-essential region VCSRO45_2335 PF04542 Sigma-70 region 2 VCSRO45_2338 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO45_2339 PF01555 DNA methylase VCSRO45_2342 PF18623 TnsE C-terminal domain VCSRO45_2343 PF06527 TniQ VCSRO45_2343 PF15978 Tn7-like transposition protein D VCSRO45_2344 PF13401 AAA domain VCSRO45_2344 PF11426 Tn7 transposition regulator TnsC VCSRO45_2345 PF00665 Integrase core domain VCSRO45_2347 PF08721 TnsA endonuclease C terminal VCSRO45_2347 PF08722 TnsA endonuclease N terminal VCSRO45_2348 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2348 PF00672 HAMP domain VCSRO45_2348 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_2350 PF01527 Transposase VCSRO45_2351 PF02371 Transposase IS116/IS110/IS902 family VCSRO45_2351 PF01548 Transposase VCSRO45_2352 PF13276 HTH-like domain VCSRO45_2352 PF00665 Integrase core domain VCSRO45_2352 PF13333 Integrase core domain VCSRO45_2353 PF01380 SIS domain VCSRO45_2354 PF00455 DeoR C terminal sensor domain VCSRO45_2354 PF08220 DeoR-like helix-turn-helix domain VCSRO45_2355 PF02887 Pyruvate kinase, alpha/beta domain VCSRO45_2355 PF00224 Pyruvate kinase, barrel domain VCSRO45_2357 PF04402 Protein of unknown function (DUF541) VCSRO45_2358 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_2358 PF03466 LysR substrate binding domain VCSRO45_2359 PF01810 LysE type translocator VCSRO45_2360 PF00924 Mechanosensitive ion channel VCSRO45_2360 PF05552 Conserved TM helix VCSRO45_2361 PF01116 Fructose-bisphosphate aldolase class-II VCSRO45_2362 PF00162 Phosphoglycerate kinase VCSRO45_2363 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO45_2363 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO45_2364 PF00593 TonB dependent receptor VCSRO45_2364 PF07715 TonB-dependent Receptor Plug Domain VCSRO45_2365 PF03466 LysR substrate binding domain VCSRO45_2365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_2366 PF02780 Transketolase, C-terminal domain VCSRO45_2366 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO45_2366 PF02779 Transketolase, pyrimidine binding domain VCSRO45_2367 PF02773 S-adenosylmethionine synthetase, C-terminal domain VCSRO45_2367 PF02772 S-adenosylmethionine synthetase, central domain VCSRO45_2367 PF00438 S-adenosylmethionine synthetase, N-terminal domain VCSRO45_2368 PF10263 SprT-like family VCSRO45_2368 PF17283 SprT-like zinc ribbon domain VCSRO45_2369 PF04231 Endonuclease I VCSRO45_2370 PF04452 RNA methyltransferase VCSRO45_2371 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VCSRO45_2371 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VCSRO45_2372 PF02622 Uncharacterized ACR, COG1678 VCSRO45_2373 PF03652 Holliday junction resolvase VCSRO45_2374 PF01479 S4 domain VCSRO45_2374 PF00579 tRNA synthetases class I (W and Y) VCSRO45_2376 PF00437 Type II/IV secretion system protein VCSRO45_2377 PF00437 Type II/IV secretion system protein VCSRO45_2378 PF01168 Alanine racemase, N-terminal domain VCSRO45_2379 PF03807 NADP oxidoreductase coenzyme F420-dependent VCSRO45_2379 PF14748 Pyrroline-5-carboxylate reductase dimerisation VCSRO45_2380 PF02325 YGGT family VCSRO45_2381 PF02594 Uncharacterised ACR, YggU family COG1872 VCSRO45_2383 PF01725 Ham1 family VCSRO45_2384 PF06969 HemN C-terminal domain VCSRO45_2384 PF04055 Radical SAM superfamily VCSRO45_2385 PF04960 Glutaminase VCSRO45_2386 PF02390 Putative methyltransferase VCSRO45_2387 PF10576 Iron-sulfur binding domain of endonuclease III VCSRO45_2387 PF00633 Helix-hairpin-helix motif VCSRO45_2387 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO45_2387 PF14815 NUDIX domain VCSRO45_2388 PF04362 Bacterial Fe(2+) trafficking VCSRO45_2389 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VCSRO45_2389 PF01464 Transglycosylase SLT domain VCSRO45_2394 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2394 PF00672 HAMP domain VCSRO45_2394 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_2400 PF00226 DnaJ domain VCSRO45_2400 PF05099 Tellurite resistance protein TerB VCSRO45_2401 PF04453 LPS transport system D VCSRO45_2401 PF03968 OstA-like protein VCSRO45_2402 PF09312 SurA N-terminal domain VCSRO45_2403 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VCSRO45_2404 PF00398 Ribosomal RNA adenine dimethylase VCSRO45_2405 PF04379 ApaG domain VCSRO45_2406 PF00149 Calcineurin-like phosphoesterase VCSRO45_2407 PF00186 Dihydrofolate reductase VCSRO45_2408 PF12821 Threonine/Serine exporter, ThrE VCSRO45_2409 PF06738 Putative threonine/serine exporter VCSRO45_2410 PF01926 50S ribosome-binding GTPase VCSRO45_2410 PF01018 GTP1/OBG VCSRO45_2411 PF01016 Ribosomal L27 protein VCSRO45_2412 PF00829 Ribosomal prokaryotic L21 protein VCSRO45_2413 PF00348 Polyprenyl synthetase VCSRO45_2414 PF13520 Amino acid permease VCSRO45_2415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VCSRO45_2415 PF00056 lactate/malate dehydrogenase, NAD binding domain VCSRO45_2416 PF01316 Arginine repressor, DNA binding domain VCSRO45_2416 PF02863 Arginine repressor, C-terminal domain VCSRO45_2417 PF16868 NMT1-like family VCSRO45_2419 PF00582 Universal stress protein family VCSRO45_2422 PF01797 Transposase IS200 like VCSRO45_2423 PF06877 Regulator of ribonuclease activity B VCSRO45_2425 PF00970 Oxidoreductase FAD-binding domain VCSRO45_2425 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO45_2425 PF00175 Oxidoreductase NAD-binding domain VCSRO45_2426 PF03063 Prismane/CO dehydrogenase family VCSRO45_2427 PF01523 Putative modulator of DNA gyrase VCSRO45_2428 PF00795 Carbon-nitrogen hydrolase VCSRO45_2429 PF13116 Protein of unknown function VCSRO45_2429 PF13502 AsmA-like C-terminal region VCSRO45_2430 PF10150 Ribonuclease E/G family VCSRO45_2430 PF00575 S1 RNA binding domain VCSRO45_2431 PF02545 Maf-like protein VCSRO45_2432 PF04093 rod shape-determining protein MreD VCSRO45_2433 PF04085 rod shape-determining protein MreC VCSRO45_2440 PF07963 Prokaryotic N-terminal methylation motif VCSRO45_2441 PF07963 Prokaryotic N-terminal methylation motif VCSRO45_2443 PF00482 Type II secretion system (T2SS), protein F VCSRO45_2444 PF00437 Type II/IV secretion system protein VCSRO45_2444 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VCSRO45_2446 PF13401 AAA domain VCSRO45_2446 PF01471 Putative peptidoglycan binding domain VCSRO45_2447 PF11741 AMIN domain VCSRO45_2447 PF03958 Bacterial type II/III secretion system short domain VCSRO45_2447 PF00263 Bacterial type II and III secretion system protein VCSRO45_2447 PF07660 Secretin and TonB N terminus short domain VCSRO45_2451 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2451 PF17157 Gammaproteobacterial periplasmic sensor domain VCSRO45_2451 PF00563 EAL domain VCSRO45_2452 PF00436 Single-strand binding protein family VCSRO45_2453 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_2454 PF00483 Nucleotidyl transferase VCSRO45_2455 PF00005 ABC transporter VCSRO45_2455 PF17755 UvrA DNA-binding domain VCSRO45_2455 PF17760 UvrA interaction domain VCSRO45_2457 PF00266 Aminotransferase class-V VCSRO45_2458 PF00696 Amino acid kinase family VCSRO45_2458 PF01842 ACT domain VCSRO45_2459 PF02965 Vitamin B12 dependent methionine synthase, activation domain VCSRO45_2459 PF00809 Pterin binding enzyme VCSRO45_2459 PF02607 B12 binding domain VCSRO45_2459 PF02574 Homocysteine S-methyltransferase VCSRO45_2459 PF02310 B12 binding domain VCSRO45_2460 PF00999 Sodium/hydrogen exchanger family VCSRO45_2475 PF01507 Phosphoadenosine phosphosulfate reductase family VCSRO45_2476 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VCSRO45_2476 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VCSRO45_2477 PF00667 FAD binding domain VCSRO45_2477 PF00258 Flavodoxin VCSRO45_2477 PF00175 Oxidoreductase NAD-binding domain VCSRO45_2480 PF09583 Phage shock protein G (Phageshock_PspG) VCSRO45_2481 PF01207 Dihydrouridine synthase (Dus) VCSRO45_2482 PF01475 Ferric uptake regulator family VCSRO45_2484 PF12706 Beta-lactamase superfamily domain VCSRO45_2485 PF00342 Phosphoglucose isomerase VCSRO45_2486 PF01894 Uncharacterised protein family UPF0047 VCSRO45_2487 PF01168 Alanine racemase, N-terminal domain VCSRO45_2487 PF00842 Alanine racemase, C-terminal domain VCSRO45_2488 PF00772 DnaB-like helicase N terminal domain VCSRO45_2488 PF03796 DnaB-like helicase C terminal domain VCSRO45_2490 PF03948 Ribosomal protein L9, C-terminal domain VCSRO45_2490 PF01281 Ribosomal protein L9, N-terminal domain VCSRO45_2491 PF01084 Ribosomal protein S18 VCSRO45_2492 PF00436 Single-strand binding protein family VCSRO45_2493 PF01250 Ribosomal protein S6 VCSRO45_2494 PF00210 Ferritin-like domain VCSRO45_2495 PF04324 BFD-like [2Fe-2S] binding domain VCSRO45_2496 PF03143 Elongation factor Tu C-terminal domain VCSRO45_2496 PF00009 Elongation factor Tu GTP binding domain VCSRO45_2496 PF03144 Elongation factor Tu domain 2 VCSRO45_2497 PF00679 Elongation factor G C-terminus VCSRO45_2497 PF14492 Elongation Factor G, domain II VCSRO45_2497 PF03764 Elongation factor G, domain IV VCSRO45_2497 PF00009 Elongation factor Tu GTP binding domain VCSRO45_2497 PF03144 Elongation factor Tu domain 2 VCSRO45_2498 PF00177 Ribosomal protein S7p/S5e VCSRO45_2499 PF00164 Ribosomal protein S12/S23 VCSRO45_2501 PF02635 DsrE/DsrF-like family VCSRO45_2502 PF02635 DsrE/DsrF-like family VCSRO45_2503 PF13309 HTH domain VCSRO45_2503 PF08348 YheO-like PAS domain VCSRO45_2504 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO45_2504 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO45_2506 PF04102 SlyX VCSRO45_2507 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VCSRO45_2508 PF01145 SPFH domain / Band 7 family VCSRO45_2509 PF12221 Bacterial membrane protein N terminal VCSRO45_2509 PF01145 SPFH domain / Band 7 family VCSRO45_2510 PF16360 GTP-binding GTPase Middle Region VCSRO45_2510 PF13167 GTP-binding GTPase N-terminal VCSRO45_2510 PF01926 50S ribosome-binding GTPase VCSRO45_2511 PF17209 Hfq protein VCSRO45_2513 PF01119 DNA mismatch repair protein, C-terminal domain VCSRO45_2513 PF08676 MutL C terminal dimerisation domain VCSRO45_2514 PF01520 N-acetylmuramoyl-L-alanine amidase VCSRO45_2515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VCSRO45_2516 PF08331 Domain of unknown function (DUF1730) VCSRO45_2525 PF00929 Exonuclease VCSRO45_2526 PF03193 RsgA GTPase VCSRO45_2527 PF02666 Phosphatidylserine decarboxylase VCSRO45_2528 PF00939 Sodium:sulfate symporter transmembrane region VCSRO45_2530 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VCSRO45_2530 PF01676 Metalloenzyme superfamily VCSRO45_2531 PF01551 Peptidase family M23 VCSRO45_2533 PF00440 Bacterial regulatory proteins, tetR family VCSRO45_2533 PF08360 QacR-like protein, C-terminal region VCSRO45_2534 PF01208 Uroporphyrinogen decarboxylase (URO-D) VCSRO45_2535 PF00293 NUDIX domain VCSRO45_2535 PF09297 NADH pyrophosphatase zinc ribbon domain VCSRO45_2536 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VCSRO45_2537 PF05000 RNA polymerase Rpb1, domain 4 VCSRO45_2537 PF04998 RNA polymerase Rpb1, domain 5 VCSRO45_2537 PF00623 RNA polymerase Rpb1, domain 2 VCSRO45_2537 PF04983 RNA polymerase Rpb1, domain 3 VCSRO45_2537 PF04997 RNA polymerase Rpb1, domain 1 VCSRO45_2538 PF04563 RNA polymerase beta subunit VCSRO45_2538 PF04561 RNA polymerase Rpb2, domain 2 VCSRO45_2538 PF04565 RNA polymerase Rpb2, domain 3 VCSRO45_2538 PF10385 RNA polymerase beta subunit external 1 domain VCSRO45_2538 PF00562 RNA polymerase Rpb2, domain 6 VCSRO45_2538 PF04560 RNA polymerase Rpb2, domain 7 VCSRO45_2539 PF00542 Ribosomal protein L7/L12 C-terminal domain VCSRO45_2539 PF16320 Ribosomal protein L7/L12 dimerisation domain VCSRO45_2540 PF00466 Ribosomal protein L10 VCSRO45_2541 PF00687 Ribosomal protein L1p/L10e family VCSRO45_2542 PF00298 Ribosomal protein L11, RNA binding domain VCSRO45_2542 PF03946 Ribosomal protein L11, N-terminal domain VCSRO45_2543 PF00467 KOW motif VCSRO45_2543 PF02357 Transcription termination factor nusG VCSRO45_2544 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VCSRO45_2545 PF03144 Elongation factor Tu domain 2 VCSRO45_2545 PF00009 Elongation factor Tu GTP binding domain VCSRO45_2545 PF03143 Elongation factor Tu C-terminal domain VCSRO45_2550 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO45_2551 PF02237 Biotin protein ligase C terminal domain VCSRO45_2551 PF03099 Biotin/lipoate A/B protein ligase family VCSRO45_2551 PF08279 HTH domain VCSRO45_2552 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VCSRO45_2552 PF01565 FAD binding domain VCSRO45_2554 PF13091 PLD-like domain VCSRO45_2561 PF00175 Oxidoreductase NAD-binding domain VCSRO45_2562 PF00175 Oxidoreductase NAD-binding domain VCSRO45_2562 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO45_2562 PF00970 Oxidoreductase FAD-binding domain VCSRO45_2563 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VCSRO45_2565 PF07497 Rho termination factor, RNA-binding domain VCSRO45_2565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO45_2565 PF07498 Rho termination factor, N-terminal domain VCSRO45_2566 PF00085 Thioredoxin VCSRO45_2567 PF00270 DEAD/DEAH box helicase VCSRO45_2567 PF00271 Helicase conserved C-terminal domain VCSRO45_2568 PF02541 Ppx/GppA phosphatase family VCSRO45_2569 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_2569 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_2569 PF09456 RcsC Alpha-Beta-Loop (ABL) VCSRO45_2569 PF00072 Response regulator receiver domain VCSRO45_2570 PF12832 MFS_1 like family VCSRO45_2573 PF16177 Acetyl-coenzyme A synthetase N-terminus VCSRO45_2573 PF00501 AMP-binding enzyme VCSRO45_2573 PF13193 AMP-binding enzyme C-terminal domain VCSRO45_2574 PF01220 Dehydroquinase class II VCSRO45_2575 PF00364 Biotin-requiring enzyme VCSRO45_2576 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VCSRO45_2576 PF00289 Biotin carboxylase, N-terminal domain VCSRO45_2576 PF02785 Biotin carboxylase C-terminal domain VCSRO45_2578 PF01207 Dihydrouridine synthase (Dus) VCSRO45_2579 PF02954 Bacterial regulatory protein, Fis family VCSRO45_2585 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) VCSRO45_2586 PF01867 CRISPR associated protein Cas1 VCSRO45_2588 PF09344 CT1975-like protein VCSRO45_2591 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) VCSRO45_2592 PF18395 Cas3 C-terminal domain VCSRO45_2592 PF18019 HD domain VCSRO45_2593 PF02661 Fic/DOC family VCSRO45_2593 PF13784 Fic/DOC family N-terminal VCSRO45_2595 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_2595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO45_2596 PF00920 Dehydratase family VCSRO45_2597 PF01202 Shikimate kinase VCSRO45_2598 PF02447 GntP family permease VCSRO45_2599 PF01081 KDPG and KHG aldolase VCSRO45_2600 PF07715 TonB-dependent Receptor Plug Domain VCSRO45_2600 PF00593 TonB dependent receptor VCSRO45_2602 PF17200 Single Cache domain 2 VCSRO45_2602 PF00672 HAMP domain VCSRO45_2602 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2603 PF01276 Orn/Lys/Arg decarboxylase, major domain VCSRO45_2603 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VCSRO45_2603 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VCSRO45_2604 PF13520 Amino acid permease VCSRO45_2605 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_2605 PF18500 CadC C-terminal domain 1 VCSRO45_2606 PF13411 MerR HTH family regulatory protein VCSRO45_2607 PF01808 AICARFT/IMPCHase bienzyme VCSRO45_2607 PF02142 MGS-like domain VCSRO45_2608 PF02843 Phosphoribosylglycinamide synthetase, C domain VCSRO45_2608 PF02844 Phosphoribosylglycinamide synthetase, N domain VCSRO45_2608 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VCSRO45_2610 PF00216 Bacterial DNA-binding protein VCSRO45_2611 PF00571 CBS domain VCSRO45_2611 PF01595 Cyclin M transmembrane N-terminal domain VCSRO45_2612 PF04222 Protein of unknown function (DUF416) VCSRO45_2613 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO45_2614 PF03167 Uracil DNA glycosylase superfamily VCSRO45_2615 PF00924 Mechanosensitive ion channel VCSRO45_2616 PF00753 Metallo-beta-lactamase superfamily VCSRO45_2616 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VCSRO45_2616 PF10996 Beta-Casp domain VCSRO45_2618 PF13006 Insertion element 4 transposase N-terminal VCSRO45_2618 PF01609 Transposase DDE domain VCSRO45_2619 PF02719 Polysaccharide biosynthesis protein VCSRO45_2620 PF02397 Bacterial sugar transferase VCSRO45_2621 PF01370 NAD dependent epimerase/dehydratase family VCSRO45_2622 PF00535 Glycosyl transferase family 2 VCSRO45_2623 PF01238 Phosphomannose isomerase type I VCSRO45_2624 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO45_2624 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO45_2624 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO45_2624 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO45_2625 PF01050 Mannose-6-phosphate isomerase VCSRO45_2625 PF00483 Nucleotidyl transferase VCSRO45_2626 PF00293 NUDIX domain VCSRO45_2627 PF01370 NAD dependent epimerase/dehydratase family VCSRO45_2628 PF16363 GDP-mannose 4,6 dehydratase VCSRO45_2629 PF13439 Glycosyltransferase Family 4 VCSRO45_2629 PF00534 Glycosyl transferases group 1 VCSRO45_2631 PF09318 Glycosyl transferase 1 domain A VCSRO45_2631 PF00534 Glycosyl transferases group 1 VCSRO45_2632 PF00535 Glycosyl transferase family 2 VCSRO45_2636 PF01609 Transposase DDE domain VCSRO45_2636 PF13808 DDE_Tnp_1-associated VCSRO45_2637 PF01609 Transposase DDE domain VCSRO45_2637 PF13808 DDE_Tnp_1-associated VCSRO45_2638 PF13808 DDE_Tnp_1-associated VCSRO45_2638 PF01609 Transposase DDE domain VCSRO45_2639 PF02706 Chain length determinant protein VCSRO45_2643 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VCSRO45_2645 PF06082 Exopolysaccharide biosynthesis protein YbjH VCSRO45_2647 PF01370 NAD dependent epimerase/dehydratase family VCSRO45_2648 PF00457 Glycosyl hydrolases family 11 VCSRO45_2648 PF01522 Polysaccharide deacetylase VCSRO45_2651 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO45_2653 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VCSRO45_2654 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VCSRO45_2660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO45_2661 PF00535 Glycosyl transferase family 2 VCSRO45_2662 PF00535 Glycosyl transferase family 2 VCSRO45_2663 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO45_2664 PF01467 Cytidylyltransferase-like VCSRO45_2665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VCSRO45_2665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VCSRO45_2665 PF06827 Zinc finger found in FPG and IleRS VCSRO45_2667 PF00471 Ribosomal protein L33 VCSRO45_2668 PF00830 Ribosomal L28 family VCSRO45_2669 PF04002 RadC-like JAB domain VCSRO45_2670 PF00672 HAMP domain VCSRO45_2670 PF02743 Cache domain VCSRO45_2670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2671 PF04127 DNA / pantothenate metabolism flavoprotein VCSRO45_2671 PF02441 Flavoprotein VCSRO45_2672 PF00440 Bacterial regulatory proteins, tetR family VCSRO45_2673 PF03279 Bacterial lipid A biosynthesis acyltransferase VCSRO45_2674 PF03279 Bacterial lipid A biosynthesis acyltransferase VCSRO45_2675 PF00156 Phosphoribosyl transferase domain VCSRO45_2676 PF03725 3' exoribonuclease family, domain 2 VCSRO45_2676 PF01138 3' exoribonuclease family, domain 1 VCSRO45_2677 PF03755 YicC-like family, N-terminal region VCSRO45_2677 PF08340 Domain of unknown function (DUF1732) VCSRO45_2682 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_2682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_2685 PF04002 RadC-like JAB domain VCSRO45_2692 PF00075 RNase H VCSRO45_2698 PF03350 Uncharacterized protein family, UPF0114 VCSRO45_2699 PF00367 phosphotransferase system, EIIB VCSRO45_2699 PF02378 Phosphotransferase system, EIIC VCSRO45_2700 PF13580 SIS domain VCSRO45_2701 PF01418 Helix-turn-helix domain, rpiR family VCSRO45_2701 PF01380 SIS domain VCSRO45_2702 PF01032 FecCD transport family VCSRO45_2703 PF01497 Periplasmic binding protein VCSRO45_2704 PF00005 ABC transporter VCSRO45_2705 PF07715 TonB-dependent Receptor Plug Domain VCSRO45_2705 PF00593 TonB dependent receptor VCSRO45_2706 PF00005 ABC transporter VCSRO45_2706 PF00664 ABC transporter transmembrane region VCSRO45_2709 PF16124 RecQ zinc-binding VCSRO45_2709 PF09382 RQC domain VCSRO45_2709 PF00271 Helicase conserved C-terminal domain VCSRO45_2709 PF00270 DEAD/DEAH box helicase VCSRO45_2709 PF00570 HRDC domain VCSRO45_2710 PF00892 EamA-like transporter family VCSRO45_2712 PF12833 Helix-turn-helix domain VCSRO45_2713 PF01810 LysE type translocator VCSRO45_2714 PF00580 UvrD/REP helicase N-terminal domain VCSRO45_2714 PF13361 UvrD-like helicase C-terminal domain VCSRO45_2715 PF01432 Peptidase family M3 VCSRO45_2716 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VCSRO45_2717 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO45_2717 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_2719 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO45_2719 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2720 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2721 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO45_2722 PF00005 ABC transporter VCSRO45_2722 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_2728 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCSRO45_2729 PF13361 UvrD-like helicase C-terminal domain VCSRO45_2729 PF00580 UvrD/REP helicase N-terminal domain VCSRO45_2730 PF00440 Bacterial regulatory proteins, tetR family VCSRO45_2731 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO45_2732 PF00873 AcrB/AcrD/AcrF family VCSRO45_2733 PF04380 Membrane fusogenic activity VCSRO45_2734 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VCSRO45_2734 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VCSRO45_2735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_2735 PF03466 LysR substrate binding domain VCSRO45_2748 PF12724 Flavodoxin domain VCSRO45_2749 PF02386 Cation transport protein VCSRO45_2750 PF01205 Uncharacterized protein family UPF0029 VCSRO45_2750 PF09186 Domain of unknown function (DUF1949) VCSRO45_2751 PF00378 Enoyl-CoA hydratase/isomerase VCSRO45_2751 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VCSRO45_2751 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VCSRO45_2752 PF02803 Thiolase, C-terminal domain VCSRO45_2752 PF00108 Thiolase, N-terminal domain VCSRO45_2753 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_2753 PF03466 LysR substrate binding domain VCSRO45_2754 PF07690 Major Facilitator Superfamily VCSRO45_2755 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO45_2755 PF12804 MobA-like NTP transferase domain VCSRO45_2756 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VCSRO45_2756 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VCSRO45_2757 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCSRO45_2757 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO45_2758 PF00231 ATP synthase VCSRO45_2759 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCSRO45_2759 PF00306 ATP synthase alpha/beta chain, C terminal domain VCSRO45_2759 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO45_2760 PF00213 ATP synthase delta (OSCP) subunit VCSRO45_2761 PF00430 ATP synthase B/B' CF(0) VCSRO45_2762 PF00137 ATP synthase subunit C VCSRO45_2763 PF00119 ATP synthase A chain VCSRO45_2764 PF03899 ATP synthase I chain VCSRO45_2765 PF17762 HTH domain found in ParB protein VCSRO45_2765 PF02195 ParB-like nuclease domain VCSRO45_2766 PF13614 AAA domain VCSRO45_2767 PF02527 rRNA small subunit methyltransferase G VCSRO45_2768 PF01134 Glucose inhibited division protein A VCSRO45_2768 PF13932 GidA associated domain VCSRO45_2773 PF01709 Transcriptional regulator VCSRO45_2774 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VCSRO45_2774 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VCSRO45_2775 PF17200 Single Cache domain 2 VCSRO45_2775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2775 PF00672 HAMP domain VCSRO45_2776 PF10928 Protein of unknown function (DUF2810) VCSRO45_2777 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_2777 PF17874 MalT-like TPR region VCSRO45_2778 PF00343 Carbohydrate phosphorylase VCSRO45_2779 PF02446 4-alpha-glucanotransferase VCSRO45_2780 PF00128 Alpha amylase, catalytic domain VCSRO45_2780 PF02806 Alpha amylase, C-terminal all-beta domain VCSRO45_2780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO45_2781 PF01797 Transposase IS200 like VCSRO45_2782 PF05638 Type VI secretion system effector, Hcp VCSRO45_2783 PF04717 Type VI secretion system, phage-baseplate injector VCSRO45_2788 PF01168 Alanine racemase, N-terminal domain VCSRO45_2788 PF00842 Alanine racemase, C-terminal domain VCSRO45_2788 PF01757 Acyltransferase family VCSRO45_2790 PF00939 Sodium:sulfate symporter transmembrane region VCSRO45_2791 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO45_2792 PF00704 Glycosyl hydrolases family 18 VCSRO45_2792 PF08329 Chitinase A, N-terminal domain VCSRO45_2795 PF02743 Cache domain VCSRO45_2795 PF00672 HAMP domain VCSRO45_2795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2799 PF01569 PAP2 superfamily VCSRO45_2800 PF00375 Sodium:dicarboxylate symporter family VCSRO45_2802 PF02630 SCO1/SenC VCSRO45_2805 PF03616 Sodium/glutamate symporter VCSRO45_2806 PF12945 Flagellar protein YcgR VCSRO45_2806 PF07238 PilZ domain VCSRO45_2809 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2812 PF01048 Phosphorylase superfamily VCSRO45_2813 PF08349 Protein of unknown function (DUF1722) VCSRO45_2814 PF13411 MerR HTH family regulatory protein VCSRO45_2815 PF00875 DNA photolyase VCSRO45_2815 PF03441 FAD binding domain of DNA photolyase VCSRO45_2816 PF01476 LysM domain VCSRO45_2816 PF03734 L,D-transpeptidase catalytic domain VCSRO45_2816 PF17969 L,D-transpeptidase C-terminal domain VCSRO45_2818 PF00270 DEAD/DEAH box helicase VCSRO45_2818 PF00271 Helicase conserved C-terminal domain VCSRO45_2819 PF00326 Prolyl oligopeptidase family VCSRO45_2819 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VCSRO45_2820 PF07715 TonB-dependent Receptor Plug Domain VCSRO45_2820 PF00593 TonB dependent receptor VCSRO45_2824 PF12849 PBP superfamily domain VCSRO45_2825 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2826 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2827 PF00005 ABC transporter VCSRO45_2828 PF00563 EAL domain VCSRO45_2828 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_2828 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2830 PF07670 Nucleoside recognition VCSRO45_2831 PF01740 STAS domain VCSRO45_2831 PF00916 Sulfate permease family VCSRO45_2833 PF08525 Opacity-associated protein A N-terminal motif VCSRO45_2833 PF01476 LysM domain VCSRO45_2833 PF01551 Peptidase family M23 VCSRO45_2834 PF00563 EAL domain VCSRO45_2834 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2834 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_2834 PF13188 PAS domain VCSRO45_2836 PF03466 LysR substrate binding domain VCSRO45_2836 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_2837 PF07690 Major Facilitator Superfamily VCSRO45_2838 PF09278 MerR, DNA binding VCSRO45_2838 PF00376 MerR family regulatory protein VCSRO45_2842 PF00375 Sodium:dicarboxylate symporter family VCSRO45_2844 PF02001 Protein of unknown function DUF134 VCSRO45_2848 PF02868 Thermolysin metallopeptidase, alpha-helical domain VCSRO45_2848 PF01447 Thermolysin metallopeptidase, catalytic domain VCSRO45_2848 PF01483 Proprotein convertase P-domain VCSRO45_2848 PF07504 Fungalysin/Thermolysin Propeptide Motif VCSRO45_2850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VCSRO45_2850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VCSRO45_2851 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCSRO45_2851 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VCSRO45_2852 PF00581 Rhodanese-like domain VCSRO45_2853 PF00563 EAL domain VCSRO45_2853 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_2854 PF13419 Haloacid dehalogenase-like hydrolase VCSRO45_2855 PF01740 STAS domain VCSRO45_2855 PF00916 Sulfate permease family VCSRO45_2856 PF00849 RNA pseudouridylate synthase VCSRO45_2860 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VCSRO45_2862 PF05947 Type VI secretion system, TssF VCSRO45_2866 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VCSRO45_2868 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO45_2868 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO45_2868 PF07724 AAA domain (Cdc48 subfamily) VCSRO45_2868 PF17871 AAA lid domain VCSRO45_2869 PF00158 Sigma-54 interaction domain VCSRO45_2869 PF02954 Bacterial regulatory protein, Fis family VCSRO45_2872 PF14331 ImcF-related N-terminal domain VCSRO45_2872 PF06761 Intracellular multiplication and human macrophage-killing VCSRO45_2872 PF06744 Type VI secretion protein IcmF C-terminal VCSRO45_2874 PF01471 Putative peptidoglycan binding domain VCSRO45_2874 PF04717 Type VI secretion system, phage-baseplate injector VCSRO45_2878 PF05025 RbsD / FucU transport protein family VCSRO45_2879 PF00005 ABC transporter VCSRO45_2880 PF02653 Branched-chain amino acid transport system / permease component VCSRO45_2881 PF13407 Periplasmic binding protein domain VCSRO45_2882 PF00294 pfkB family carbohydrate kinase VCSRO45_2883 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_2884 PF04973 Nicotinamide mononucleotide transporter VCSRO45_2885 PF04973 Nicotinamide mononucleotide transporter VCSRO45_2886 PF01048 Phosphorylase superfamily VCSRO45_2888 PF03009 Glycerophosphoryl diester phosphodiesterase family VCSRO45_2889 PF07690 Major Facilitator Superfamily VCSRO45_2892 PF02743 Cache domain VCSRO45_2892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_2892 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_2893 PF00072 Response regulator receiver domain VCSRO45_2893 PF02954 Bacterial regulatory protein, Fis family VCSRO45_2893 PF00158 Sigma-54 interaction domain VCSRO45_2896 PF01266 FAD dependent oxidoreductase VCSRO45_2897 PF00041 Fibronectin type III domain VCSRO45_2897 PF12561 ToxR activated gene A lipoprotein domain VCSRO45_2898 PF01327 Polypeptide deformylase VCSRO45_2899 PF03611 PTS system sugar-specific permease component VCSRO45_2901 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO45_2902 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_2903 PF00970 Oxidoreductase FAD-binding domain VCSRO45_2903 PF00042 Globin VCSRO45_2903 PF00175 Oxidoreductase NAD-binding domain VCSRO45_2904 PF03334 Na+/H+ antiporter subunit VCSRO45_2905 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VCSRO45_2906 PF01899 Na+/H+ ion antiporter subunit VCSRO45_2907 PF00361 Proton-conducting membrane transporter VCSRO45_2908 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VCSRO45_2909 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCSRO45_2909 PF13244 Domain of unknown function (DUF4040) VCSRO45_2909 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VCSRO45_2909 PF00361 Proton-conducting membrane transporter VCSRO45_2911 PF00582 Universal stress protein family VCSRO45_2912 PF03222 Tryptophan/tyrosine permease family VCSRO45_2913 PF01212 Beta-eliminating lyase VCSRO45_2915 PF12843 Putative quorum-sensing-regulated virulence factor VCSRO45_2917 PF00563 EAL domain VCSRO45_2917 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2917 PF08448 PAS fold VCSRO45_2918 PF00313 'Cold-shock' DNA-binding domain VCSRO45_2921 PF13519 von Willebrand factor type A domain VCSRO45_2921 PF07584 Aerotolerance regulator N-terminal VCSRO45_2924 PF01882 Protein of unknown function DUF58 VCSRO45_2925 PF07726 ATPase family associated with various cellular activities (AAA) VCSRO45_2925 PF17863 AAA lid domain VCSRO45_2926 PF02743 Cache domain VCSRO45_2926 PF00672 HAMP domain VCSRO45_2926 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2929 PF07670 Nucleoside recognition VCSRO45_2929 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO45_2929 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO45_2930 PF07687 Peptidase dimerisation domain VCSRO45_2930 PF01546 Peptidase family M20/M25/M40 VCSRO45_2932 PF01590 GAF domain VCSRO45_2932 PF00158 Sigma-54 interaction domain VCSRO45_2933 PF00175 Oxidoreductase NAD-binding domain VCSRO45_2933 PF00042 Globin VCSRO45_2933 PF00970 Oxidoreductase FAD-binding domain VCSRO45_2934 PF00313 'Cold-shock' DNA-binding domain VCSRO45_2935 PF03889 Alternative ribosome-rescue factor A VCSRO45_2938 PF00072 Response regulator receiver domain VCSRO45_2940 PF01256 Carbohydrate kinase VCSRO45_2940 PF03853 YjeF-related protein N-terminus VCSRO45_2941 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO45_2941 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO45_2943 PF07885 Ion channel VCSRO45_2946 PF12706 Beta-lactamase superfamily domain VCSRO45_2947 PF00478 IMP dehydrogenase / GMP reductase domain VCSRO45_2949 PF09299 Mu transposase, C-terminal VCSRO45_2949 PF00665 Integrase core domain VCSRO45_2953 PF01554 MatE VCSRO45_2955 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2956 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_2957 PF04854 Protein of unknown function, DUF624 VCSRO45_2959 PF00005 ABC transporter VCSRO45_2959 PF17912 MalK OB fold domain VCSRO45_2960 PF01797 Transposase IS200 like VCSRO45_2961 PF01797 Transposase IS200 like VCSRO45_2962 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_2962 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO45_2963 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO45_2963 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO45_2963 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO45_2963 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO45_2964 PF04041 beta-1,4-mannooligosaccharide phosphorylase VCSRO45_2965 PF04041 beta-1,4-mannooligosaccharide phosphorylase VCSRO45_2967 PF02264 LamB porin VCSRO45_2968 PF00672 HAMP domain VCSRO45_2968 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2968 PF02743 Cache domain VCSRO45_2969 PF01238 Phosphomannose isomerase type I VCSRO45_2972 PF02013 Cellulose or protein binding domain VCSRO45_2972 PF00150 Cellulase (glycosyl hydrolase family 5) VCSRO45_2973 PF00665 Integrase core domain VCSRO45_2974 PF01527 Transposase VCSRO45_2976 PF00270 DEAD/DEAH box helicase VCSRO45_2976 PF00271 Helicase conserved C-terminal domain VCSRO45_2977 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCSRO45_2978 PF02540 NAD synthase VCSRO45_2979 PF01467 Cytidylyltransferase-like VCSRO45_2980 PF11849 Domain of unknown function (DUF3369) VCSRO45_2981 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_2981 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO45_2981 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_2983 PF03553 Na+/H+ antiporter family VCSRO45_2984 PF07690 Major Facilitator Superfamily VCSRO45_2986 PF08448 PAS fold VCSRO45_2986 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_2987 PF00657 GDSL-like Lipase/Acylhydrolase VCSRO45_2988 PF16458 Beta-prism lectin VCSRO45_2988 PF12563 Hemolytic toxin N terminal VCSRO45_2988 PF07968 Leukocidin/Hemolysin toxin family VCSRO45_2989 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_2989 PF00672 HAMP domain VCSRO45_2989 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_2990 PF00561 alpha/beta hydrolase fold VCSRO45_2991 PF03280 Proteobacterial lipase chaperone protein VCSRO45_2992 PF00801 PKD domain VCSRO45_2992 PF05547 Immune inhibitor A peptidase M6 VCSRO45_2996 PF01032 FecCD transport family VCSRO45_2997 PF01032 FecCD transport family VCSRO45_2998 PF00005 ABC transporter VCSRO45_2999 PF12833 Helix-turn-helix domain VCSRO45_3000 PF07715 TonB-dependent Receptor Plug Domain VCSRO45_3000 PF00593 TonB dependent receptor VCSRO45_3002 PF00871 Acetokinase family VCSRO45_3010 PF12801 4Fe-4S binding domain VCSRO45_3014 PF11756 Nitrous oxide-stimulated promoter VCSRO45_3015 PF00127 Copper binding proteins, plastocyanin/azurin family VCSRO45_3016 PF01590 GAF domain VCSRO45_3016 PF00158 Sigma-54 interaction domain VCSRO45_3017 PF00258 Flavodoxin VCSRO45_3017 PF00753 Metallo-beta-lactamase superfamily VCSRO45_3017 PF00301 Rubredoxin VCSRO45_3018 PF18113 Rubredoxin binding C-terminal domain VCSRO45_3018 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_3020 PF00672 HAMP domain VCSRO45_3020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3020 PF17202 Single cache domain 3 VCSRO45_3022 PF01814 Hemerythrin HHE cation binding domain VCSRO45_3022 PF04405 Domain of Unknown function (DUF542) VCSRO45_3023 PF00072 Response regulator receiver domain VCSRO45_3023 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_3024 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VCSRO45_3024 PF07730 Histidine kinase VCSRO45_3024 PF00672 HAMP domain VCSRO45_3024 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3025 PF07690 Major Facilitator Superfamily VCSRO45_3026 PF01568 Molydopterin dinucleotide binding domain VCSRO45_3026 PF00384 Molybdopterin oxidoreductase VCSRO45_3026 PF14710 Respiratory nitrate reductase alpha N-terminal VCSRO45_3027 PF13247 4Fe-4S dicluster domain VCSRO45_3027 PF14711 Respiratory nitrate reductase beta C-terminal VCSRO45_3028 PF02613 Nitrate reductase delta subunit VCSRO45_3029 PF02665 Nitrate reductase gamma subunit VCSRO45_3036 PF11799 impB/mucB/samB family C-terminal domain VCSRO45_3036 PF00817 impB/mucB/samB family VCSRO45_3036 PF13438 Domain of unknown function (DUF4113) VCSRO45_3043 PF00665 Integrase core domain VCSRO45_3044 PF01527 Transposase VCSRO45_3050 PF01810 LysE type translocator VCSRO45_3051 PF00701 Dihydrodipicolinate synthetase family VCSRO45_3052 PF01810 LysE type translocator VCSRO45_3053 PF13657 HipA N-terminal domain VCSRO45_3053 PF07804 HipA-like C-terminal domain VCSRO45_3054 PF00672 HAMP domain VCSRO45_3054 PF02743 Cache domain VCSRO45_3054 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3059 PF00672 HAMP domain VCSRO45_3059 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3059 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3060 PF00072 Response regulator receiver domain VCSRO45_3060 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_3062 PF01261 Xylose isomerase-like TIM barrel VCSRO45_3063 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VCSRO45_3065 PF00596 Class II Aldolase and Adducin N-terminal domain VCSRO45_3066 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO45_3067 PF03611 PTS system sugar-specific permease component VCSRO45_3068 PF08220 DeoR-like helix-turn-helix domain VCSRO45_3068 PF00455 DeoR C terminal sensor domain VCSRO45_3074 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_3074 PF00072 Response regulator receiver domain VCSRO45_3075 PF00672 HAMP domain VCSRO45_3075 PF13426 PAS domain VCSRO45_3075 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3075 PF14827 Double sensory domain of two-component sensor kinase VCSRO45_3075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3078 PF00873 AcrB/AcrD/AcrF family VCSRO45_3083 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3083 PF00672 HAMP domain VCSRO45_3083 PF02743 Cache domain VCSRO45_3084 PF00282 Pyridoxal-dependent decarboxylase conserved domain VCSRO45_3085 PF07943 Penicillin-binding protein 5, C-terminal domain VCSRO45_3085 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO45_3088 PF00194 Eukaryotic-type carbonic anhydrase VCSRO45_3090 PF02347 Glycine cleavage system P-protein VCSRO45_3091 PF01597 Glycine cleavage H-protein VCSRO45_3092 PF00464 Serine hydroxymethyltransferase VCSRO45_3094 PF01571 Aminomethyltransferase folate-binding domain VCSRO45_3094 PF08669 Glycine cleavage T-protein C-terminal barrel domain VCSRO45_3095 PF02824 TGS domain VCSRO45_3095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VCSRO45_3095 PF03129 Anticodon binding domain VCSRO45_3095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO45_3096 PF05198 Translation initiation factor IF-3, N-terminal domain VCSRO45_3096 PF00707 Translation initiation factor IF-3, C-terminal domain VCSRO45_3097 PF01632 Ribosomal protein L35 VCSRO45_3098 PF00453 Ribosomal protein L20 VCSRO45_3099 PF00589 Phage integrase family VCSRO45_3099 PF13495 Phage integrase, N-terminal SAM-like domain VCSRO45_3110 PF13673 Acetyltransferase (GNAT) domain VCSRO45_3162 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system VCSRO45_3163 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA VCSRO45_3180 PF13302 Acetyltransferase (GNAT) domain VCSRO45_3184 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH VCSRO45_3187 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VCSRO45_3189 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB VCSRO45_3190 PF01381 Helix-turn-helix VCSRO45_3192 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VCSRO45_3194 PF13597 Anaerobic ribonucleoside-triphosphate reductase VCSRO45_3194 PF03477 ATP cone domain VCSRO45_3196 PF00155 Aminotransferase class I and II VCSRO45_3197 PF08443 RimK-like ATP-grasp domain VCSRO45_3197 PF18030 RimK PreATP-grasp domain VCSRO45_3198 PF02378 Phosphotransferase system, EIIC VCSRO45_3198 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO45_3199 PF00294 pfkB family carbohydrate kinase VCSRO45_3200 PF00381 PTS HPr component phosphorylation site VCSRO45_3200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO45_3201 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO45_3201 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_3202 PF12320 Type 5 capsule protein repressor C-terminal domain VCSRO45_3202 PF00149 Calcineurin-like phosphoesterase VCSRO45_3203 PF13476 AAA domain VCSRO45_3204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3204 PF00072 Response regulator receiver domain VCSRO45_3205 PF00155 Aminotransferase class I and II VCSRO45_3207 PF00654 Voltage gated chloride channel VCSRO45_3208 PF02492 CobW/HypB/UreG, nucleotide-binding domain VCSRO45_3208 PF07683 Cobalamin synthesis protein cobW C-terminal domain VCSRO45_3209 PF01926 50S ribosome-binding GTPase VCSRO45_3213 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO45_3213 PF02780 Transketolase, C-terminal domain VCSRO45_3213 PF02779 Transketolase, pyrimidine binding domain VCSRO45_3214 PF00923 Transaldolase/Fructose-6-phosphate aldolase VCSRO45_3215 PF04198 Putative sugar-binding domain VCSRO45_3216 PF00581 Rhodanese-like domain VCSRO45_3218 PF00899 ThiF family VCSRO45_3219 PF03454 MoeA C-terminal region (domain IV) VCSRO45_3219 PF03453 MoeA N-terminal region (domain I and II) VCSRO45_3219 PF00994 Probable molybdopterin binding domain VCSRO45_3220 PF01227 GTP cyclohydrolase I VCSRO45_3221 PF01625 Peptide methionine sulfoxide reductase VCSRO45_3221 PF01641 SelR domain VCSRO45_3222 PF01268 Formate--tetrahydrofolate ligase VCSRO45_3223 PF01741 Large-conductance mechanosensitive channel, MscL VCSRO45_3226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3226 PF03466 LysR substrate binding domain VCSRO45_3227 PF13419 Haloacid dehalogenase-like hydrolase VCSRO45_3230 PF00128 Alpha amylase, catalytic domain VCSRO45_3230 PF02903 Alpha amylase, N-terminal ig-like domain VCSRO45_3230 PF16657 Maltogenic Amylase, C-terminal domain VCSRO45_3231 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3232 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3235 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VCSRO45_3235 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO45_3237 PF00005 ABC transporter VCSRO45_3237 PF17912 MalK OB fold domain VCSRO45_3237 PF03459 TOBE domain VCSRO45_3238 PF00128 Alpha amylase, catalytic domain VCSRO45_3238 PF00686 Starch binding domain VCSRO45_3239 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO45_3239 PF14760 Rnk N-terminus VCSRO45_3240 PF13419 Haloacid dehalogenase-like hydrolase VCSRO45_3241 PF00202 Aminotransferase class-III VCSRO45_3242 PF00266 Aminotransferase class-V VCSRO45_3244 PF00005 ABC transporter VCSRO45_3244 PF08402 TOBE domain VCSRO45_3245 PF00005 ABC transporter VCSRO45_3246 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3247 PF00392 Bacterial regulatory proteins, gntR family VCSRO45_3247 PF07702 UTRA domain VCSRO45_3249 PF00854 POT family VCSRO45_3254 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO45_3255 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3256 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3256 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO45_3257 PF00005 ABC transporter VCSRO45_3257 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_3258 PF03479 Plants and Prokaryotes Conserved (PCC) domain VCSRO45_3258 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO45_3258 PF12804 MobA-like NTP transferase domain VCSRO45_3261 PF02798 Glutathione S-transferase, N-terminal domain VCSRO45_3261 PF00043 Glutathione S-transferase, C-terminal domain VCSRO45_3265 PF03061 Thioesterase superfamily VCSRO45_3267 PF12793 Sugar transport-related sRNA regulator N-term VCSRO45_3267 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO45_3268 PF00593 TonB dependent receptor VCSRO45_3268 PF04886 PT repeat VCSRO45_3268 PF07715 TonB-dependent Receptor Plug Domain VCSRO45_3269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3269 PF03466 LysR substrate binding domain VCSRO45_3270 PF00583 Acetyltransferase (GNAT) family VCSRO45_3270 PF13380 CoA binding domain VCSRO45_3270 PF13607 Succinyl-CoA ligase like flavodoxin domain VCSRO45_3272 PF01820 D-ala D-ala ligase N-terminus VCSRO45_3272 PF07478 D-ala D-ala ligase C-terminus VCSRO45_3274 PF01253 Translation initiation factor SUI1 VCSRO45_3275 PF01797 Transposase IS200 like VCSRO45_3276 PF03701 Uncharacterised protein family (UPF0181) VCSRO45_3279 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_3279 PF00072 Response regulator receiver domain VCSRO45_3281 PF02233 NAD(P) transhydrogenase beta subunit VCSRO45_3282 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VCSRO45_3282 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VCSRO45_3282 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VCSRO45_3285 PF17158 Membrane-associated sensor, integral membrane domain VCSRO45_3285 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3289 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3289 PF08448 PAS fold VCSRO45_3295 PF03831 PhnA domain VCSRO45_3295 PF08274 PhnA Zinc-Ribbon VCSRO45_3297 PF03741 Integral membrane protein TerC family VCSRO45_3299 PF00149 Calcineurin-like phosphoesterase VCSRO45_3299 PF02872 5'-nucleotidase, C-terminal domain VCSRO45_3300 PF11398 Protein of unknown function (DUF2813) VCSRO45_3301 PF06496 Protein of unknown function (DUF1097) VCSRO45_3302 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3302 PF03466 LysR substrate binding domain VCSRO45_3303 PF01226 Formate/nitrite transporter VCSRO45_3304 PF04264 YceI-like domain VCSRO45_3305 PF01292 Prokaryotic cytochrome b561 VCSRO45_3307 PF10388 EAL-domain associated signalling protein domain VCSRO45_3307 PF00563 EAL domain VCSRO45_3309 PF09335 SNARE associated Golgi protein VCSRO45_3310 PF02416 mttA/Hcf106 family VCSRO45_3311 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_3311 PF00072 Response regulator receiver domain VCSRO45_3312 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3312 PF13493 Domain of unknown function (DUF4118) VCSRO45_3312 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3312 PF02702 Osmosensitive K+ channel His kinase sensor domain VCSRO45_3313 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO45_3313 PF10371 Domain of unknown function VCSRO45_3313 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VCSRO45_3313 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VCSRO45_3313 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VCSRO45_3314 PF02705 K+ potassium transporter VCSRO45_3315 PF00589 Phage integrase family VCSRO45_3315 PF13356 Arm DNA-binding domain VCSRO45_3317 PF05717 IS66 Orf2 like protein VCSRO45_3320 PF00873 AcrB/AcrD/AcrF family VCSRO45_3321 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO45_3325 PF00672 HAMP domain VCSRO45_3325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3325 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3326 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_3326 PF00072 Response regulator receiver domain VCSRO45_3332 PF00403 Heavy-metal-associated domain VCSRO45_3333 PF13411 MerR HTH family regulatory protein VCSRO45_3336 PF00665 Integrase core domain VCSRO45_3337 PF01527 Transposase VCSRO45_3340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO45_3340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO45_3343 PF06942 GlpM protein VCSRO45_3345 PF03466 LysR substrate binding domain VCSRO45_3345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3347 PF00881 Nitroreductase family VCSRO45_3348 PF00873 AcrB/AcrD/AcrF family VCSRO45_3349 PF00529 HlyD membrane-fusion protein of T1SS VCSRO45_3349 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO45_3351 PF04143 Sulphur transport VCSRO45_3354 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO45_3354 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO45_3361 PF13006 Insertion element 4 transposase N-terminal VCSRO45_3361 PF01609 Transposase DDE domain VCSRO45_3365 PF00367 phosphotransferase system, EIIB VCSRO45_3365 PF02378 Phosphotransferase system, EIIC VCSRO45_3366 PF00356 Bacterial regulatory proteins, lacI family VCSRO45_3367 PF08244 Glycosyl hydrolases family 32 C terminal VCSRO45_3367 PF00251 Glycosyl hydrolases family 32 N-terminal domain VCSRO45_3368 PF00294 pfkB family carbohydrate kinase VCSRO45_3369 PF01266 FAD dependent oxidoreductase VCSRO45_3369 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VCSRO45_3370 PF00672 HAMP domain VCSRO45_3370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3371 PF05736 OprF membrane domain VCSRO45_3371 PF00691 OmpA family VCSRO45_3372 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO45_3372 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO45_3373 PF13419 Haloacid dehalogenase-like hydrolase VCSRO45_3376 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3376 PF00672 HAMP domain VCSRO45_3377 PF03606 C4-dicarboxylate anaerobic carrier VCSRO45_3378 PF03315 Serine dehydratase beta chain VCSRO45_3378 PF03313 Serine dehydratase alpha chain VCSRO45_3379 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_3379 PF00072 Response regulator receiver domain VCSRO45_3380 PF07730 Histidine kinase VCSRO45_3380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3380 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VCSRO45_3380 PF00672 HAMP domain VCSRO45_3381 PF13187 4Fe-4S dicluster domain VCSRO45_3381 PF12838 4Fe-4S dicluster domain VCSRO45_3383 PF00384 Molybdopterin oxidoreductase VCSRO45_3383 PF01568 Molydopterin dinucleotide binding domain VCSRO45_3383 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCSRO45_3384 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VCSRO45_3385 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO45_3387 PF01966 HD domain VCSRO45_3388 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_3388 PF00072 Response regulator receiver domain VCSRO45_3389 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3389 PF07730 Histidine kinase VCSRO45_3389 PF05231 MASE1 VCSRO45_3390 PF07690 Major Facilitator Superfamily VCSRO45_3392 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3393 PF00005 ABC transporter VCSRO45_3393 PF08402 TOBE domain VCSRO45_3394 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VCSRO45_3396 PF00108 Thiolase, N-terminal domain VCSRO45_3396 PF02803 Thiolase, C-terminal domain VCSRO45_3397 PF00108 Thiolase, N-terminal domain VCSRO45_3397 PF02803 Thiolase, C-terminal domain VCSRO45_3398 PF00106 short chain dehydrogenase VCSRO45_3399 PF01797 Transposase IS200 like VCSRO45_3400 PF02355 Protein export membrane protein VCSRO45_3400 PF07549 SecD/SecF GG Motif VCSRO45_3401 PF13721 SecD export protein N-terminal TM region VCSRO45_3401 PF02355 Protein export membrane protein VCSRO45_3401 PF07549 SecD/SecF GG Motif VCSRO45_3405 PF13006 Insertion element 4 transposase N-terminal VCSRO45_3405 PF01609 Transposase DDE domain VCSRO45_3406 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3407 PF00483 Nucleotidyl transferase VCSRO45_3408 PF06483 Chitinase C VCSRO45_3408 PF00704 Glycosyl hydrolases family 18 VCSRO45_3409 PF00465 Iron-containing alcohol dehydrogenase VCSRO45_3411 PF00072 Response regulator receiver domain VCSRO45_3411 PF14532 Sigma-54 interaction domain VCSRO45_3411 PF02954 Bacterial regulatory protein, Fis family VCSRO45_3412 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3412 PF02743 Cache domain VCSRO45_3415 PF07690 Major Facilitator Superfamily VCSRO45_3416 PF00224 Pyruvate kinase, barrel domain VCSRO45_3416 PF02887 Pyruvate kinase, alpha/beta domain VCSRO45_3417 PF00072 Response regulator receiver domain VCSRO45_3417 PF01627 Hpt domain VCSRO45_3417 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3417 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3417 PF00672 HAMP domain VCSRO45_3418 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO45_3419 PF02142 MGS-like domain VCSRO45_3420 PF00857 Isochorismatase family VCSRO45_3421 PF01219 Prokaryotic diacylglycerol kinase VCSRO45_3422 PF00580 UvrD/REP helicase N-terminal domain VCSRO45_3422 PF12462 DNA helicase IV / RNA helicase N terminal VCSRO45_3422 PF13361 UvrD-like helicase C-terminal domain VCSRO45_3423 PF12805 FUSC-like inner membrane protein yccS VCSRO45_3424 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3424 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3424 PF08448 PAS fold VCSRO45_3424 PF00072 Response regulator receiver domain VCSRO45_3424 PF13188 PAS domain VCSRO45_3430 PF00005 ABC transporter VCSRO45_3430 PF03459 TOBE domain VCSRO45_3431 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3433 PF07685 CobB/CobQ-like glutamine amidotransferase domain VCSRO45_3433 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VCSRO45_3439 PF00072 Response regulator receiver domain VCSRO45_3439 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3439 PF09308 LuxQ, periplasmic VCSRO45_3439 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3440 PF13407 Periplasmic binding protein domain VCSRO45_3442 PF01541 GIY-YIG catalytic domain VCSRO45_3443 PF04337 Protein of unknown function, DUF480 VCSRO45_3445 PF04363 Protein of unknown function (DUF496) VCSRO45_3447 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VCSRO45_3447 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VCSRO45_3448 PF00230 Major intrinsic protein VCSRO45_3449 PF01266 FAD dependent oxidoreductase VCSRO45_3449 PF04324 BFD-like [2Fe-2S] binding domain VCSRO45_3450 PF00890 FAD binding domain VCSRO45_3451 PF02754 Cysteine-rich domain VCSRO45_3451 PF13183 4Fe-4S dicluster domain VCSRO45_3452 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCSRO45_3452 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VCSRO45_3453 PF00085 Thioredoxin VCSRO45_3454 PF07690 Major Facilitator Superfamily VCSRO45_3458 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3459 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3460 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO45_3461 PF00005 ABC transporter VCSRO45_3462 PF13006 Insertion element 4 transposase N-terminal VCSRO45_3462 PF01609 Transposase DDE domain VCSRO45_3464 PF05762 VWA domain containing CoxE-like protein VCSRO45_3465 PF07728 AAA domain (dynein-related subfamily) VCSRO45_3465 PF17868 AAA lid domain VCSRO45_3465 PF12592 Protein of unknown function (DUF3763) VCSRO45_3466 PF00293 NUDIX domain VCSRO45_3467 PF01212 Beta-eliminating lyase VCSRO45_3468 PF00034 Cytochrome c VCSRO45_3469 PF08361 MAATS-type transcriptional repressor, C-terminal region VCSRO45_3469 PF00440 Bacterial regulatory proteins, tetR family VCSRO45_3470 PF00270 DEAD/DEAH box helicase VCSRO45_3470 PF00271 Helicase conserved C-terminal domain VCSRO45_3471 PF04336 Acyl carrier protein phosphodiesterase VCSRO45_3473 PF03222 Tryptophan/tyrosine permease family VCSRO45_3474 PF00672 HAMP domain VCSRO45_3474 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3474 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_3475 PF16363 GDP-mannose 4,6 dehydratase VCSRO45_3476 PF03746 LamB/YcsF family VCSRO45_3478 PF02626 Carboxyltransferase domain, subdomain A and B VCSRO45_3480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VCSRO45_3480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VCSRO45_3482 PF00005 ABC transporter VCSRO45_3483 PF13472 GDSL-like Lipase/Acylhydrolase family VCSRO45_3484 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VCSRO45_3484 PF12241 Trans-2-enoyl-CoA reductase catalytic region VCSRO45_3484 PF07055 Enoyl reductase FAD binding domain VCSRO45_3485 PF00563 EAL domain VCSRO45_3485 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3485 PF00498 FHA domain VCSRO45_3487 PF00226 DnaJ domain VCSRO45_3487 PF01556 DnaJ C terminal domain VCSRO45_3487 PF00684 DnaJ central domain VCSRO45_3491 PF13419 Haloacid dehalogenase-like hydrolase VCSRO45_3494 PF00294 pfkB family carbohydrate kinase VCSRO45_3496 PF00271 Helicase conserved C-terminal domain VCSRO45_3496 PF00270 DEAD/DEAH box helicase VCSRO45_3496 PF03880 DbpA RNA binding domain VCSRO45_3497 PF00773 RNB domain VCSRO45_3497 PF00575 S1 RNA binding domain VCSRO45_3497 PF08206 Ribonuclease B OB domain VCSRO45_3499 PF12849 PBP superfamily domain VCSRO45_3500 PF01575 MaoC like domain VCSRO45_3501 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VCSRO45_3502 PF18416 N-acetylglucosamine binding protein domain 2 VCSRO45_3502 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VCSRO45_3504 PF04389 Peptidase family M28 VCSRO45_3504 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO45_3505 PF00491 Arginase family VCSRO45_3506 PF17810 Arginine decarboxylase helical bundle domain VCSRO45_3506 PF17944 Arginine decarboxylase C-terminal helical extension VCSRO45_3506 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VCSRO45_3508 PF00571 CBS domain VCSRO45_3508 PF01769 Divalent cation transporter VCSRO45_3508 PF03448 MgtE intracellular N domain VCSRO45_3509 PF00166 Chaperonin 10 Kd subunit VCSRO45_3510 PF00118 TCP-1/cpn60 chaperonin family VCSRO45_3512 PF13840 ACT domain VCSRO45_3512 PF00696 Amino acid kinase family VCSRO45_3513 PF06339 Ectoine synthase VCSRO45_3514 PF00202 Aminotransferase class-III VCSRO45_3515 PF00583 Acetyltransferase (GNAT) family VCSRO45_3516 PF01329 Pterin 4 alpha carbinolamine dehydratase VCSRO45_3517 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VCSRO45_3518 PF00501 AMP-binding enzyme VCSRO45_3518 PF13193 AMP-binding enzyme C-terminal domain VCSRO45_3522 PF03466 LysR substrate binding domain VCSRO45_3522 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3524 PF00892 EamA-like transporter family VCSRO45_3526 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VCSRO45_3526 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO45_3526 PF14602 Hexapeptide repeat of succinyl-transferase VCSRO45_3527 PF00571 CBS domain VCSRO45_3527 PF03471 Transporter associated domain VCSRO45_3527 PF01595 Cyclin M transmembrane N-terminal domain VCSRO45_3528 PF02566 OsmC-like protein VCSRO45_3529 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO45_3530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO45_3530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO45_3533 PF13520 Amino acid permease VCSRO45_3534 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3536 PF04397 LytTr DNA-binding domain VCSRO45_3536 PF00072 Response regulator receiver domain VCSRO45_3537 PF07694 5TMR of 5TMR-LYT VCSRO45_3537 PF13492 GAF domain VCSRO45_3537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3537 PF06580 Histidine kinase VCSRO45_3540 PF00005 ABC transporter VCSRO45_3540 PF02687 FtsX-like permease family VCSRO45_3540 PF12704 MacB-like periplasmic core domain VCSRO45_3541 PF00005 ABC transporter VCSRO45_3543 PF00248 Aldo/keto reductase family VCSRO45_3544 PF00128 Alpha amylase, catalytic domain VCSRO45_3545 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO45_3546 PF12262 Bacterial virulence factor lipase N-terminal VCSRO45_3547 PF08447 PAS fold VCSRO45_3547 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3547 PF13426 PAS domain VCSRO45_3548 PF02868 Thermolysin metallopeptidase, alpha-helical domain VCSRO45_3548 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO45_3548 PF01447 Thermolysin metallopeptidase, catalytic domain VCSRO45_3548 PF03413 Peptidase propeptide and YPEB domain VCSRO45_3548 PF07504 Fungalysin/Thermolysin Propeptide Motif VCSRO45_3549 PF03922 OmpW family VCSRO45_3551 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO45_3552 PF00155 Aminotransferase class I and II VCSRO45_3552 PF00392 Bacterial regulatory proteins, gntR family VCSRO45_3553 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO45_3554 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO45_3555 PF02322 Cytochrome bd terminal oxidase subunit II VCSRO45_3558 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO45_3559 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3559 PF03466 LysR substrate binding domain VCSRO45_3560 PF01527 Transposase VCSRO45_3561 PF00665 Integrase core domain VCSRO45_3563 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO45_3563 PF00107 Zinc-binding dehydrogenase VCSRO45_3564 PF00155 Aminotransferase class I and II VCSRO45_3565 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO45_3566 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3566 PF03466 LysR substrate binding domain VCSRO45_3567 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO45_3572 PF01966 HD domain VCSRO45_3573 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VCSRO45_3573 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VCSRO45_3574 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VCSRO45_3575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VCSRO45_3575 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VCSRO45_3580 PF02595 Glycerate kinase family VCSRO45_3581 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3581 PF00672 HAMP domain VCSRO45_3582 PF01243 Pyridoxamine 5'-phosphate oxidase VCSRO45_3583 PF06228 Haem utilisation ChuX/HutX VCSRO45_3584 PF04055 Radical SAM superfamily VCSRO45_3585 PF03544 Gram-negative bacterial TonB protein C-terminal VCSRO45_3586 PF01618 MotA/TolQ/ExbB proton channel family VCSRO45_3587 PF02472 Biopolymer transport protein ExbD/TolR VCSRO45_3588 PF01497 Periplasmic binding protein VCSRO45_3589 PF01032 FecCD transport family VCSRO45_3590 PF00005 ABC transporter VCSRO45_3591 PF01797 Transposase IS200 like VCSRO45_3597 PF02743 Cache domain VCSRO45_3597 PF00672 HAMP domain VCSRO45_3597 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3598 PF03473 MOSC domain VCSRO45_3598 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO45_3598 PF03473 MOSC domain VCSRO45_3598 PF03476 MOSC N-terminal beta barrel domain VCSRO45_3598 PF03476 MOSC N-terminal beta barrel domain VCSRO45_3598 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO45_3599 PF01979 Amidohydrolase family VCSRO45_3601 PF05656 Protein of unknown function (DUF805) VCSRO45_3603 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO45_3604 PF05661 Protein of unknown function (DUF808) VCSRO45_3606 PF00313 'Cold-shock' DNA-binding domain VCSRO45_3611 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3611 PF08448 PAS fold VCSRO45_3612 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3612 PF08448 PAS fold VCSRO45_3613 PF08220 DeoR-like helix-turn-helix domain VCSRO45_3613 PF00455 DeoR C terminal sensor domain VCSRO45_3616 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3617 PF14785 Maltose transport system permease protein MalF P2 domain VCSRO45_3617 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3618 PF01547 Bacterial extracellular solute-binding protein VCSRO45_3619 PF00005 ABC transporter VCSRO45_3619 PF08402 TOBE domain VCSRO45_3620 PF13302 Acetyltransferase (GNAT) domain VCSRO45_3623 PF01906 Putative heavy-metal-binding VCSRO45_3624 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_3626 PF00072 Response regulator receiver domain VCSRO45_3626 PF01584 CheW-like domain VCSRO45_3627 PF01047 MarR family VCSRO45_3628 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3631 PF00563 EAL domain VCSRO45_3631 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3631 PF03707 Bacterial signalling protein N terminal repeat VCSRO45_3635 PF03466 LysR substrate binding domain VCSRO45_3635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3636 PF00563 EAL domain VCSRO45_3636 PF00990 Diguanylate cyclase, GGDEF domain VCSRO45_3638 PF05726 Pirin C-terminal cupin domain VCSRO45_3638 PF02678 Pirin VCSRO45_3639 PF06865 Pyrimidine/purine nucleoside phosphorylase VCSRO45_3641 PF07690 Major Facilitator Superfamily VCSRO45_3642 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3642 PF12729 Four helix bundle sensory module for signal transduction VCSRO45_3642 PF00672 HAMP domain VCSRO45_3644 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO45_3644 PF13654 AAA domain VCSRO45_3646 PF00005 ABC transporter VCSRO45_3646 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_3647 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO45_3648 PF00672 HAMP domain VCSRO45_3648 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3648 PF17200 Single Cache domain 2 VCSRO45_3650 PF03466 LysR substrate binding domain VCSRO45_3650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3651 PF02652 L-lactate permease VCSRO45_3652 PF01070 FMN-dependent dehydrogenase VCSRO45_3654 PF03618 Kinase/pyrophosphorylase VCSRO45_3655 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO45_3655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VCSRO45_3655 PF00391 PEP-utilising enzyme, mobile domain VCSRO45_3656 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3656 PF08447 PAS fold VCSRO45_3657 PF01554 MatE VCSRO45_3658 PF00271 Helicase conserved C-terminal domain VCSRO45_3658 PF00270 DEAD/DEAH box helicase VCSRO45_3659 PF12833 Helix-turn-helix domain VCSRO45_3660 PF02627 Carboxymuconolactone decarboxylase family VCSRO45_3662 PF00005 ABC transporter VCSRO45_3662 PF00664 ABC transporter transmembrane region VCSRO45_3664 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCSRO45_3666 PF01810 LysE type translocator VCSRO45_3667 PF12833 Helix-turn-helix domain VCSRO45_3670 PF01557 Fumarylacetoacetate (FAA) hydrolase family VCSRO45_3671 PF01047 MarR family VCSRO45_3672 PF02566 OsmC-like protein VCSRO45_3673 PF13609 Gram-negative porin VCSRO45_3674 PF00892 EamA-like transporter family VCSRO45_3675 PF00462 Glutaredoxin VCSRO45_3676 PF07670 Nucleoside recognition VCSRO45_3677 PF07670 Nucleoside recognition VCSRO45_3678 PF03600 Citrate transporter VCSRO45_3680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VCSRO45_3680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VCSRO45_3681 PF06029 AlkA N-terminal domain VCSRO45_3681 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO45_3682 PF07681 DoxX VCSRO45_3683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3683 PF03466 LysR substrate binding domain VCSRO45_3687 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VCSRO45_3689 PF07148 Maltose operon periplasmic protein precursor (MalM) VCSRO45_3690 PF02264 LamB porin VCSRO45_3691 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO45_3691 PF00128 Alpha amylase, catalytic domain VCSRO45_3693 PF00672 HAMP domain VCSRO45_3693 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3695 PF00672 HAMP domain VCSRO45_3697 PF00793 DAHP synthetase I family VCSRO45_3698 PF00005 ABC transporter VCSRO45_3699 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3700 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO45_3701 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3702 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO45_3702 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO45_3702 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO45_3702 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO45_3703 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO45_3703 PF02378 Phosphotransferase system, EIIC VCSRO45_3703 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO45_3704 PF01232 Mannitol dehydrogenase Rossmann domain VCSRO45_3704 PF08125 Mannitol dehydrogenase C-terminal domain VCSRO45_3705 PF05068 Mannitol repressor VCSRO45_3706 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCSRO45_3712 PF13460 NAD(P)H-binding VCSRO45_3713 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3713 PF03466 LysR substrate binding domain VCSRO45_3714 PF00672 HAMP domain VCSRO45_3714 PF02743 Cache domain VCSRO45_3714 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3715 PF00106 short chain dehydrogenase VCSRO45_3716 PF03466 LysR substrate binding domain VCSRO45_3716 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO45_3717 PF04013 Putative SAM-dependent RNA methyltransferase VCSRO45_3718 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VCSRO45_3719 PF13520 Amino acid permease VCSRO45_3720 PF01276 Orn/Lys/Arg decarboxylase, major domain VCSRO45_3720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VCSRO45_3720 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VCSRO45_3721 PF00171 Aldehyde dehydrogenase family VCSRO45_3722 PF01037 Lrp/AsnC ligand binding domain VCSRO45_3723 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3723 PF00672 HAMP domain VCSRO45_3723 PF02743 Cache domain VCSRO45_3725 PF00474 Sodium:solute symporter family VCSRO45_3727 PF01619 Proline dehydrogenase VCSRO45_3727 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VCSRO45_3727 PF14850 DNA-binding domain of Proline dehydrogenase VCSRO45_3727 PF00171 Aldehyde dehydrogenase family VCSRO45_3728 PF12833 Helix-turn-helix domain VCSRO45_3730 PF03781 Sulfatase-modifying factor enzyme 1 VCSRO45_3731 PF00196 Bacterial regulatory proteins, luxR family VCSRO45_3731 PF00072 Response regulator receiver domain VCSRO45_3732 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VCSRO45_3732 PF01243 Pyridoxamine 5'-phosphate oxidase VCSRO45_3733 PF00529 HlyD membrane-fusion protein of T1SS VCSRO45_3736 PF03412 Peptidase C39 family VCSRO45_3736 PF00005 ABC transporter VCSRO45_3736 PF00664 ABC transporter transmembrane region VCSRO45_3738 PF00072 Response regulator receiver domain VCSRO45_3738 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_3740 PF02743 Cache domain VCSRO45_3740 PF00672 HAMP domain VCSRO45_3740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3741 PF01339 CheB methylesterase VCSRO45_3741 PF00072 Response regulator receiver domain VCSRO45_3742 PF03975 CheD chemotactic sensory transduction VCSRO45_3743 PF01739 CheR methyltransferase, SAM binding domain VCSRO45_3743 PF03705 CheR methyltransferase, all-alpha domain VCSRO45_3744 PF00672 HAMP domain VCSRO45_3744 PF02203 Tar ligand binding domain homologue VCSRO45_3744 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO45_3745 PF01584 CheW-like domain VCSRO45_3746 PF01584 CheW-like domain VCSRO45_3747 PF01584 CheW-like domain VCSRO45_3747 PF01627 Hpt domain VCSRO45_3747 PF09078 CheY binding VCSRO45_3747 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3747 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO45_3748 PF00072 Response regulator receiver domain VCSRO45_3751 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3752 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO45_3752 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO45_3753 PF00005 ABC transporter VCSRO45_3753 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO45_3754 PF08019 Phosphoethanolamine transferase EptA/EptB VCSRO45_3754 PF00884 Sulfatase VCSRO45_3755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO45_3755 PF00512 His Kinase A (phospho-acceptor) domain VCSRO45_3755 PF08521 Two-component sensor kinase N-terminal VCSRO45_3756 PF00486 Transcriptional regulatory protein, C terminal VCSRO45_3756 PF00072 Response regulator receiver domain VCSRO45_3758 PF00106 short chain dehydrogenase VCSRO45_3760 PF00501 AMP-binding enzyme VCSRO45_3762 PF13718 GNAT acetyltransferase 2 VCSRO45_3762 PF05127 Helicase VCSRO45_3763 PF13416 Bacterial extracellular solute-binding protein VCSRO45_3764 PF08775 ParB family VCSRO45_3764 PF02195 ParB-like nuclease domain VCSRO45_3765 PF13614 AAA domain VCSRO45_3765 PF18607 ParA helix turn helix domain