locus-tag class description VCSRO96_0001 PF00258 Flavodoxin VCSRO96_0002 PF01926 50S ribosome-binding GTPase VCSRO96_0002 PF12631 MnmE helical domain VCSRO96_0002 PF10396 GTP-binding protein TrmE N-terminus VCSRO96_0003 PF02096 60Kd inner membrane protein VCSRO96_0003 PF14849 YidC periplasmic domain VCSRO96_0004 PF00825 Ribonuclease P VCSRO96_0005 PF00468 Ribosomal protein L34 VCSRO96_0006 PF00005 ABC transporter VCSRO96_0007 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_0008 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_0009 PF11638 DnaA N-terminal domain VCSRO96_0009 PF08299 Bacterial dnaA protein helix-turn-helix VCSRO96_0009 PF00308 Bacterial dnaA protein VCSRO96_0010 PF00712 DNA polymerase III beta subunit, N-terminal domain VCSRO96_0010 PF02767 DNA polymerase III beta subunit, central domain VCSRO96_0010 PF02768 DNA polymerase III beta subunit, C-terminal domain VCSRO96_0011 PF02463 RecF/RecN/SMC N terminal domain VCSRO96_0012 PF00204 DNA gyrase B VCSRO96_0012 PF00986 DNA gyrase B subunit, carboxyl terminus VCSRO96_0012 PF18053 DNA gyrase B subunit insert domain VCSRO96_0012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0012 PF01751 Toprim domain VCSRO96_0015 PF00011 Hsp20/alpha crystallin family VCSRO96_0016 PF00155 Aminotransferase class I and II VCSRO96_0017 PF02092 Glycyl-tRNA synthetase beta subunit VCSRO96_0017 PF05746 DALR anticodon binding domain VCSRO96_0018 PF02091 Glycyl-tRNA synthetase alpha subunit VCSRO96_0019 PF01169 Uncharacterized protein family UPF0016 VCSRO96_0021 PF01797 Transposase IS200 like VCSRO96_0022 PF01206 Sulfurtransferase TusA VCSRO96_0024 PF00107 Zinc-binding dehydrogenase VCSRO96_0024 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO96_0025 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO96_0025 PF00585 C-terminal regulatory domain of Threonine dehydratase VCSRO96_0026 PF00920 Dehydratase family VCSRO96_0027 PF01063 Amino-transferase class IV VCSRO96_0029 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO96_0029 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO96_0029 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO96_0030 PF13335 Magnesium chelatase, subunit ChlI C-terminal VCSRO96_0030 PF01078 Magnesium chelatase, subunit ChlI VCSRO96_0031 PF01553 Acyltransferase VCSRO96_0032 PF01323 DSBA-like thioredoxin domain VCSRO96_0033 PF01636 Phosphotransferase enzyme family VCSRO96_0034 PF13746 4Fe-4S dicluster domain VCSRO96_0034 PF12801 4Fe-4S binding domain VCSRO96_0034 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VCSRO96_0035 PF06288 Protein of unknown function (DUF1040) VCSRO96_0036 PF07070 SpoOM protein VCSRO96_0037 PF03006 Haemolysin-III related VCSRO96_0039 PF02386 Cation transport protein VCSRO96_0040 PF02254 TrkA-N domain VCSRO96_0040 PF02080 TrkA-C domain VCSRO96_0041 PF01189 16S rRNA methyltransferase RsmB/F VCSRO96_0041 PF01029 NusB family VCSRO96_0042 PF02911 Formyl transferase, C-terminal domain VCSRO96_0042 PF00551 Formyl transferase VCSRO96_0043 PF01327 Polypeptide deformylase VCSRO96_0044 PF01476 LysM domain VCSRO96_0045 PF02481 DNA recombination-mediator protein A VCSRO96_0045 PF17782 DprA winged helix domain VCSRO96_0046 PF04361 Protein of unknown function (DUF494) VCSRO96_0047 PF01396 Topoisomerase DNA binding C4 zinc finger VCSRO96_0048 PF13006 Insertion element 4 transposase N-terminal VCSRO96_0048 PF01609 Transposase DDE domain VCSRO96_0049 PF02222 ATP-grasp domain VCSRO96_0049 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VCSRO96_0050 PF00731 AIR carboxylase VCSRO96_0051 PF01300 Telomere recombination VCSRO96_0052 PF01218 Coproporphyrinogen III oxidase VCSRO96_0053 PF08501 Shikimate dehydrogenase substrate binding domain VCSRO96_0053 PF01488 Shikimate / quinate 5-dehydrogenase VCSRO96_0053 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VCSRO96_0055 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_0062 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VCSRO96_0063 PF01964 Radical SAM ThiC family VCSRO96_0063 PF13667 ThiC-associated domain VCSRO96_0064 PF02581 Thiamine monophosphate synthase VCSRO96_0065 PF00899 ThiF family VCSRO96_0066 PF02597 ThiS family VCSRO96_0067 PF05690 Thiazole biosynthesis protein ThiG VCSRO96_0068 PF06968 Biotin and Thiamin Synthesis associated domain VCSRO96_0068 PF04055 Radical SAM superfamily VCSRO96_0070 PF13276 HTH-like domain VCSRO96_0070 PF00665 Integrase core domain VCSRO96_0070 PF13333 Integrase core domain VCSRO96_0071 PF00557 Metallopeptidase family M24 VCSRO96_0071 PF01321 Creatinase/Prolidase N-terminal domain VCSRO96_0071 PF00557 Metallopeptidase family M24 VCSRO96_0071 PF01321 Creatinase/Prolidase N-terminal domain VCSRO96_0072 PF03466 LysR substrate binding domain VCSRO96_0072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_0073 PF07690 Major Facilitator Superfamily VCSRO96_0075 PF01037 Lrp/AsnC ligand binding domain VCSRO96_0076 PF08448 PAS fold VCSRO96_0076 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0076 PF00563 EAL domain VCSRO96_0077 PF04445 Putative SAM-dependent methyltransferase VCSRO96_0079 PF00892 EamA-like transporter family VCSRO96_0080 PF00582 Universal stress protein family VCSRO96_0081 PF00210 Ferritin-like domain VCSRO96_0082 PF10625 Universal stress protein B (UspB) VCSRO96_0085 PF02646 RmuC family VCSRO96_0086 PF01209 ubiE/COQ5 methyltransferase family VCSRO96_0087 PF02036 SCP-2 sterol transfer family VCSRO96_0088 PF03109 ABC1 family VCSRO96_0089 PF02416 mttA/Hcf106 family VCSRO96_0090 PF02416 mttA/Hcf106 family VCSRO96_0091 PF00902 Sec-independent protein translocase protein (TatC) VCSRO96_0092 PF03150 Di-haem cytochrome c peroxidase VCSRO96_0092 PF00034 Cytochrome c VCSRO96_0093 PF01554 MatE VCSRO96_0095 PF00717 Peptidase S24-like VCSRO96_0095 PF01726 LexA DNA binding domain VCSRO96_0096 PF01553 Acyltransferase VCSRO96_0097 PF01040 UbiA prenyltransferase family VCSRO96_0098 PF04345 Chorismate lyase VCSRO96_0099 PF03748 Flagellar basal body-associated protein FliL VCSRO96_0100 PF00672 HAMP domain VCSRO96_0100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_0100 PF02203 Tar ligand binding domain homologue VCSRO96_0101 PF01694 Rhomboid family VCSRO96_0101 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VCSRO96_0102 PF00581 Rhodanese-like domain VCSRO96_0103 PF01026 TatD related DNase VCSRO96_0104 PF00490 Delta-aminolevulinic acid dehydratase VCSRO96_0106 PF01367 5'-3' exonuclease, C-terminal SAM fold VCSRO96_0106 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VCSRO96_0106 PF00476 DNA polymerase family A VCSRO96_0106 PF01612 3'-5' exonuclease VCSRO96_0107 PF01926 50S ribosome-binding GTPase VCSRO96_0108 PF00034 Cytochrome c VCSRO96_0110 PF04220 Der GTPase activator (YihI) VCSRO96_0111 PF10675 Protein of unknown function (DUF2489) VCSRO96_0112 PF06969 HemN C-terminal domain VCSRO96_0112 PF04055 Radical SAM superfamily VCSRO96_0113 PF07219 HemY protein N-terminus VCSRO96_0114 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VCSRO96_0115 PF02602 Uroporphyrinogen-III synthase HemD VCSRO96_0116 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VCSRO96_0116 PF03900 Porphobilinogen deaminase, C-terminal domain VCSRO96_0117 PF01295 Adenylate cyclase, class-I VCSRO96_0117 PF12633 Adenylate cyclase NT domain VCSRO96_0118 PF01491 Frataxin-like domain VCSRO96_0119 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VCSRO96_0119 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VCSRO96_0120 PF01678 Diaminopimelate epimerase VCSRO96_0121 PF04340 Protein of unknown function, DUF484 VCSRO96_0122 PF00589 Phage integrase family VCSRO96_0122 PF02899 Phage integrase, N-terminal SAM-like domain VCSRO96_0123 PF13419 Haloacid dehalogenase-like hydrolase VCSRO96_0124 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0124 PF00563 EAL domain VCSRO96_0124 PF08495 FIST N domain VCSRO96_0124 PF10442 FIST C domain VCSRO96_0128 PF12146 Serine aminopeptidase, S33 VCSRO96_0129 PF01810 LysE type translocator VCSRO96_0130 PF00563 EAL domain VCSRO96_0130 PF08668 HDOD domain VCSRO96_0131 PF00210 Ferritin-like domain VCSRO96_0137 PF00448 SRP54-type protein, GTPase domain VCSRO96_0137 PF02881 SRP54-type protein, helical bundle domain VCSRO96_0138 PF00005 ABC transporter VCSRO96_0139 PF18075 FtsX extracellular domain VCSRO96_0140 PF00140 Sigma-70 factor, region 1.2 VCSRO96_0140 PF04545 Sigma-70, region 4 VCSRO96_0140 PF04542 Sigma-70 region 2 VCSRO96_0142 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_0142 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO96_0143 PF00440 Bacterial regulatory proteins, tetR family VCSRO96_0145 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO96_0146 PF00593 TonB dependent receptor VCSRO96_0146 PF07715 TonB-dependent Receptor Plug Domain VCSRO96_0147 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO96_0147 PF00082 Subtilase family VCSRO96_0147 PF05922 Peptidase inhibitor I9 VCSRO96_0148 PF01177 Asp/Glu/Hydantoin racemase VCSRO96_0162 PF00962 Adenosine/AMP deaminase VCSRO96_0163 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_0163 PF13188 PAS domain VCSRO96_0163 PF00563 EAL domain VCSRO96_0163 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0164 PF02954 Bacterial regulatory protein, Fis family VCSRO96_0164 PF00072 Response regulator receiver domain VCSRO96_0164 PF00158 Sigma-54 interaction domain VCSRO96_0165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0165 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_0165 PF00989 PAS fold VCSRO96_0167 PF00120 Glutamine synthetase, catalytic domain VCSRO96_0167 PF03951 Glutamine synthetase, beta-Grasp domain VCSRO96_0169 PF03144 Elongation factor Tu domain 2 VCSRO96_0169 PF00009 Elongation factor Tu GTP binding domain VCSRO96_0169 PF00679 Elongation factor G C-terminus VCSRO96_0171 PF03631 Virulence factor BrkB VCSRO96_0172 PF02580 D-Tyr-tRNA(Tyr) deacylase VCSRO96_0173 PF09500 Putative thioesterase (yiiD_Cterm) VCSRO96_0173 PF00583 Acetyltransferase (GNAT) family VCSRO96_0175 PF01293 Phosphoenolpyruvate carboxykinase VCSRO96_0176 PF01430 Hsp33 protein VCSRO96_0177 PF01479 S4 domain VCSRO96_0178 PF11356 Type II secretion system protein C VCSRO96_0179 PF00263 Bacterial type II and III secretion system protein VCSRO96_0179 PF03958 Bacterial type II/III secretion system short domain VCSRO96_0180 PF00437 Type II/IV secretion system protein VCSRO96_0181 PF00482 Type II secretion system (T2SS), protein F VCSRO96_0182 PF08334 Type II secretion system (T2SS), protein G VCSRO96_0182 PF07963 Prokaryotic N-terminal methylation motif VCSRO96_0183 PF12019 Type II transport protein GspH VCSRO96_0184 PF07963 Prokaryotic N-terminal methylation motif VCSRO96_0184 PF02501 Type II secretion system (T2SS), protein I VCSRO96_0185 PF07963 Prokaryotic N-terminal methylation motif VCSRO96_0185 PF11612 Type II secretion system (T2SS), protein J VCSRO96_0186 PF03934 Type II secretion system (T2SS), protein K VCSRO96_0187 PF12693 GspL periplasmic domain VCSRO96_0187 PF05134 Type II secretion system (T2SS), protein L VCSRO96_0188 PF04612 Type II secretion system (T2SS), protein M VCSRO96_0189 PF01203 Type II secretion system (T2SS), protein N VCSRO96_0190 PF00459 Inositol monophosphatase family VCSRO96_0191 PF00293 NUDIX domain VCSRO96_0192 PF01521 Iron-sulphur cluster biosynthesis VCSRO96_0192 PF01106 NifU-like domain VCSRO96_0193 PF00156 Phosphoribosyl transferase domain VCSRO96_0194 PF00561 alpha/beta hydrolase fold VCSRO96_0196 PF17674 HHH domain VCSRO96_0196 PF00575 S1 RNA binding domain VCSRO96_0196 PF09371 Tex-like protein N-terminal domain VCSRO96_0196 PF16921 Tex protein YqgF-like domain VCSRO96_0197 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO96_0197 PF03449 Transcription elongation factor, N-terminal VCSRO96_0202 PF00005 ABC transporter VCSRO96_0203 PF02653 Branched-chain amino acid transport system / permease component VCSRO96_0204 PF00933 Glycosyl hydrolase family 3 N terminal domain VCSRO96_0204 PF01915 Glycosyl hydrolase family 3 C-terminal domain VCSRO96_0205 PF08329 Chitinase A, N-terminal domain VCSRO96_0205 PF00704 Glycosyl hydrolases family 18 VCSRO96_0206 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_0206 PF00072 Response regulator receiver domain VCSRO96_0207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0207 PF00672 HAMP domain VCSRO96_0207 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_0208 PF00860 Permease family VCSRO96_0209 PF00270 DEAD/DEAH box helicase VCSRO96_0209 PF00271 Helicase conserved C-terminal domain VCSRO96_0209 PF17191 RecG wedge domain VCSRO96_0210 PF02824 TGS domain VCSRO96_0210 PF04607 Region found in RelA / SpoT proteins VCSRO96_0210 PF13291 ACT domain VCSRO96_0211 PF01192 RNA polymerase Rpb6 VCSRO96_0212 PF00625 Guanylate kinase VCSRO96_0213 PF02592 Putative vitamin uptake transporter VCSRO96_0214 PF00474 Sodium:solute symporter family VCSRO96_0216 PF03471 Transporter associated domain VCSRO96_0216 PF02080 TrkA-C domain VCSRO96_0216 PF00999 Sodium/hydrogen exchanger family VCSRO96_0217 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_0217 PF00072 Response regulator receiver domain VCSRO96_0218 PF02683 Cytochrome C biogenesis protein transmembrane region VCSRO96_0218 PF11412 Disulphide bond corrector protein DsbC VCSRO96_0219 PF18494 Pullulanase Ins domain VCSRO96_0219 PF03714 Bacterial pullanase-associated domain VCSRO96_0219 PF17967 Pullulanase N2 domain VCSRO96_0219 PF11852 Domain of unknown function (DUF3372) VCSRO96_0219 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO96_0220 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCSRO96_0221 PF10415 Fumarase C C-terminus VCSRO96_0221 PF00206 Lyase VCSRO96_0222 PF17158 Membrane-associated sensor, integral membrane domain VCSRO96_0222 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0223 PF04186 FxsA cytoplasmic membrane protein VCSRO96_0224 PF00588 SpoU rRNA Methylase family VCSRO96_0225 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VCSRO96_0225 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VCSRO96_0226 PF00672 HAMP domain VCSRO96_0226 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0226 PF16527 Two-component sensor protein CpxA, periplasmic domain VCSRO96_0226 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_0227 PF00072 Response regulator receiver domain VCSRO96_0227 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_0229 PF01545 Cation efflux family VCSRO96_0229 PF16916 Dimerisation domain of Zinc Transporter VCSRO96_0230 PF00365 Phosphofructokinase VCSRO96_0231 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VCSRO96_0232 PF06005 Cell division protein ZapB VCSRO96_0233 PF02219 Methylenetetrahydrofolate reductase VCSRO96_0234 PF03447 Homoserine dehydrogenase, NAD binding domain VCSRO96_0234 PF00742 Homoserine dehydrogenase VCSRO96_0234 PF00696 Amino acid kinase family VCSRO96_0235 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO96_0236 PF01340 Met Apo-repressor, MetJ VCSRO96_0237 PF00390 Malic enzyme, N-terminal domain VCSRO96_0237 PF03949 Malic enzyme, NAD binding domain VCSRO96_0238 PF01197 Ribosomal protein L31 VCSRO96_0239 PF00270 DEAD/DEAH box helicase VCSRO96_0239 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VCSRO96_0239 PF18074 Primosomal protein N C-terminal domain VCSRO96_0239 PF17764 3′ DNA-binding domain (3′BD) VCSRO96_0239 PF00271 Helicase conserved C-terminal domain VCSRO96_0240 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_0241 PF05036 Sporulation related domain VCSRO96_0242 PF00227 Proteasome subunit VCSRO96_0243 PF07724 AAA domain (Cdc48 subfamily) VCSRO96_0243 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO96_0243 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO96_0244 PF01040 UbiA prenyltransferase family VCSRO96_0245 PF03737 Aldolase/RraA VCSRO96_0246 PF01554 MatE VCSRO96_0247 PF00121 Triosephosphate isomerase VCSRO96_0251 PF08220 DeoR-like helix-turn-helix domain VCSRO96_0251 PF00455 DeoR C terminal sensor domain VCSRO96_0252 PF00166 Chaperonin 10 Kd subunit VCSRO96_0253 PF00118 TCP-1/cpn60 chaperonin family VCSRO96_0255 PF04055 Radical SAM superfamily VCSRO96_0256 PF09285 Elongation factor P, C-terminal VCSRO96_0256 PF08207 Elongation factor P (EF-P) KOW-like domain VCSRO96_0256 PF01132 Elongation factor P (EF-P) OB domain VCSRO96_0257 PF02313 Fumarate reductase subunit D VCSRO96_0258 PF02300 Fumarate reductase subunit C VCSRO96_0259 PF13085 2Fe-2S iron-sulfur cluster binding domain VCSRO96_0259 PF13183 4Fe-4S dicluster domain VCSRO96_0260 PF00890 FAD binding domain VCSRO96_0260 PF02910 Fumarate reductase flavoprotein C-term VCSRO96_0261 PF00152 tRNA synthetases class II (D, K and N) VCSRO96_0262 PF00581 Rhodanese-like domain VCSRO96_0263 PF02556 Preprotein translocase subunit SecB VCSRO96_0264 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VCSRO96_0264 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VCSRO96_0265 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_0265 PF06426 Serine acetyltransferase, N-terminal VCSRO96_0268 PF00311 Phosphoenolpyruvate carboxylase VCSRO96_0269 PF07687 Peptidase dimerisation domain VCSRO96_0269 PF01546 Peptidase family M20/M25/M40 VCSRO96_0270 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO96_0270 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO96_0271 PF00696 Amino acid kinase family VCSRO96_0272 PF00764 Arginosuccinate synthase VCSRO96_0273 PF14698 Argininosuccinate lyase C-terminal VCSRO96_0273 PF00206 Lyase VCSRO96_0275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO96_0275 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_0276 PF00462 Glutaredoxin VCSRO96_0276 PF08534 Redoxin VCSRO96_0277 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_0277 PF03466 LysR substrate binding domain VCSRO96_0278 PF17092 Penicillin-binding protein OB-like domain VCSRO96_0278 PF00912 Transglycosylase VCSRO96_0278 PF00905 Penicillin binding protein transpeptidase domain VCSRO96_0282 PF04351 Pilus assembly protein, PilP VCSRO96_0283 PF11741 AMIN domain VCSRO96_0283 PF00263 Bacterial type II and III secretion system protein VCSRO96_0283 PF03958 Bacterial type II/III secretion system short domain VCSRO96_0283 PF07660 Secretin and TonB N terminus short domain VCSRO96_0284 PF01202 Shikimate kinase VCSRO96_0285 PF01761 3-dehydroquinate synthase VCSRO96_0287 PF02086 D12 class N6 adenine-specific DNA methyltransferase VCSRO96_0288 PF00834 Ribulose-phosphate 3 epimerase family VCSRO96_0289 PF13419 Haloacid dehalogenase-like hydrolase VCSRO96_0290 PF00579 tRNA synthetases class I (W and Y) VCSRO96_0293 PF04055 Radical SAM superfamily VCSRO96_0293 PF18693 TRAM domain VCSRO96_0293 PF00919 Uncharacterized protein family UPF0004 VCSRO96_0294 PF00117 Glutamine amidotransferase class-I VCSRO96_0295 PF00202 Aminotransferase class-III VCSRO96_0296 PF04958 Arginine N-succinyltransferase beta subunit VCSRO96_0297 PF00171 Aldehyde dehydrogenase family VCSRO96_0300 PF13333 Integrase core domain VCSRO96_0300 PF00665 Integrase core domain VCSRO96_0300 PF13276 HTH-like domain VCSRO96_0301 PF00027 Cyclic nucleotide-binding domain VCSRO96_0301 PF13545 Crp-like helix-turn-helix domain VCSRO96_0302 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO96_0303 PF06794 Uncharacterised protein family (UPF0270) VCSRO96_0304 PF00561 alpha/beta hydrolase fold VCSRO96_0306 PF00005 ABC transporter VCSRO96_0306 PF12848 ABC transporter VCSRO96_0307 PF02525 Flavodoxin-like fold VCSRO96_0308 PF00999 Sodium/hydrogen exchanger family VCSRO96_0308 PF02254 TrkA-N domain VCSRO96_0310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO96_0311 PF01112 Asparaginase VCSRO96_0312 PF00709 Adenylosuccinate synthetase VCSRO96_0313 PF08238 Sel1 repeat VCSRO96_0314 PF11893 Domain of unknown function (DUF3413) VCSRO96_0314 PF00884 Sulfatase VCSRO96_0315 PF08461 Ribonuclease R winged-helix domain VCSRO96_0315 PF17876 Cold shock domain VCSRO96_0315 PF08206 Ribonuclease B OB domain VCSRO96_0315 PF00773 RNB domain VCSRO96_0315 PF00575 S1 RNA binding domain VCSRO96_0316 PF00588 SpoU rRNA Methylase family VCSRO96_0316 PF08032 RNA 2'-O ribose methyltransferase substrate binding VCSRO96_0317 PF01797 Transposase IS200 like VCSRO96_0318 PF00338 Ribosomal protein S10p/S20e VCSRO96_0319 PF00297 Ribosomal protein L3 VCSRO96_0320 PF00573 Ribosomal protein L4/L1 family VCSRO96_0321 PF00276 Ribosomal protein L23 VCSRO96_0322 PF03947 Ribosomal Proteins L2, C-terminal domain VCSRO96_0322 PF00181 Ribosomal Proteins L2, RNA binding domain VCSRO96_0323 PF00203 Ribosomal protein S19 VCSRO96_0324 PF00237 Ribosomal protein L22p/L17e VCSRO96_0325 PF07650 KH domain VCSRO96_0325 PF00189 Ribosomal protein S3, C-terminal domain VCSRO96_0326 PF00252 Ribosomal protein L16p/L10e VCSRO96_0327 PF00831 Ribosomal L29 protein VCSRO96_0328 PF00366 Ribosomal protein S17 VCSRO96_0329 PF00238 Ribosomal protein L14p/L23e VCSRO96_0330 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VCSRO96_0330 PF00467 KOW motif VCSRO96_0331 PF00673 ribosomal L5P family C-terminus VCSRO96_0331 PF00281 Ribosomal protein L5 VCSRO96_0332 PF00253 Ribosomal protein S14p/S29e VCSRO96_0333 PF00410 Ribosomal protein S8 VCSRO96_0334 PF00347 Ribosomal protein L6 VCSRO96_0335 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VCSRO96_0336 PF03719 Ribosomal protein S5, C-terminal domain VCSRO96_0336 PF00333 Ribosomal protein S5, N-terminal domain VCSRO96_0337 PF00327 Ribosomal protein L30p/L7e VCSRO96_0338 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VCSRO96_0339 PF00344 SecY translocase VCSRO96_0340 PF00444 Ribosomal protein L36 VCSRO96_0341 PF00416 Ribosomal protein S13/S18 VCSRO96_0342 PF00411 Ribosomal protein S11 VCSRO96_0343 PF00163 Ribosomal protein S4/S9 N-terminal domain VCSRO96_0343 PF01479 S4 domain VCSRO96_0344 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VCSRO96_0344 PF01000 RNA polymerase Rpb3/RpoA insert domain VCSRO96_0344 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VCSRO96_0345 PF01196 Ribosomal protein L17 VCSRO96_0347 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO96_0347 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO96_0348 PF08525 Opacity-associated protein A N-terminal motif VCSRO96_0348 PF04225 Opacity-associated protein A LysM-like domain VCSRO96_0349 PF00892 EamA-like transporter family VCSRO96_0350 PF13673 Acetyltransferase (GNAT) domain VCSRO96_0351 PF00271 Helicase conserved C-terminal domain VCSRO96_0351 PF03880 DbpA RNA binding domain VCSRO96_0351 PF00270 DEAD/DEAH box helicase VCSRO96_0353 PF02872 5'-nucleotidase, C-terminal domain VCSRO96_0353 PF00149 Calcineurin-like phosphoesterase VCSRO96_0354 PF14824 Sirohaem biosynthesis protein central VCSRO96_0354 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO96_0354 PF10414 Sirohaem synthase dimerisation region VCSRO96_0355 PF01507 Phosphoadenosine phosphosulfate reductase family VCSRO96_0356 PF00009 Elongation factor Tu GTP binding domain VCSRO96_0361 PF00005 ABC transporter VCSRO96_0361 PF02687 FtsX-like permease family VCSRO96_0361 PF12704 MacB-like periplasmic core domain VCSRO96_0363 PF10795 Protein of unknown function (DUF2607) VCSRO96_0364 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VCSRO96_0365 PF01625 Peptide methionine sulfoxide reductase VCSRO96_0366 PF17243 POTRA domain TamA domain 1 VCSRO96_0366 PF01103 Surface antigen VCSRO96_0366 PF07244 Surface antigen variable number repeat VCSRO96_0367 PF04357 TamB, inner membrane protein subunit of TAM complex VCSRO96_0368 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VCSRO96_0369 PF00719 Inorganic pyrophosphatase VCSRO96_0370 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VCSRO96_0371 PF01225 Mur ligase family, catalytic domain VCSRO96_0371 PF08245 Mur ligase middle domain VCSRO96_0371 PF02875 Mur ligase family, glutamate ligase domain VCSRO96_0372 PF02441 Flavoprotein VCSRO96_0374 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_0375 PF00005 ABC transporter VCSRO96_0376 PF04751 Protein of unknown function (DUF615) VCSRO96_0377 PF01523 Putative modulator of DNA gyrase VCSRO96_0378 PF00571 CBS domain VCSRO96_0378 PF01769 Divalent cation transporter VCSRO96_0378 PF03448 MgtE intracellular N domain VCSRO96_0379 PF00381 PTS HPr component phosphorylation site VCSRO96_0380 PF03668 P-loop ATPase protein family VCSRO96_0381 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO96_0382 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VCSRO96_0383 PF04963 Sigma-54 factor, core binding domain VCSRO96_0383 PF00309 Sigma-54 factor, Activator interacting domain (AID) VCSRO96_0383 PF04552 Sigma-54, DNA binding domain VCSRO96_0384 PF00005 ABC transporter VCSRO96_0384 PF12399 Branched-chain amino acid ATP-binding cassette transporter VCSRO96_0385 PF03968 OstA-like protein VCSRO96_0388 PF00571 CBS domain VCSRO96_0388 PF01380 SIS domain VCSRO96_0389 PF01699 Sodium/calcium exchanger protein VCSRO96_0390 PF00005 ABC transporter VCSRO96_0391 PF02405 Permease MlaE VCSRO96_0392 PF02470 MlaD protein VCSRO96_0393 PF05494 MlaC protein VCSRO96_0395 PF01722 BolA-like protein VCSRO96_0396 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VCSRO96_0397 PF01553 Acyltransferase VCSRO96_0398 PF01042 Endoribonuclease L-PSP VCSRO96_0399 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VCSRO96_0399 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VCSRO96_0400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCSRO96_0400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCSRO96_0401 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCSRO96_0401 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCSRO96_0402 PF02562 PhoH-like protein VCSRO96_0402 PF13638 PIN domain VCSRO96_0403 PF00271 Helicase conserved C-terminal domain VCSRO96_0403 PF12137 RNA polymerase recycling family C-terminal VCSRO96_0403 PF00176 SNF2 family N-terminal domain VCSRO96_0403 PF18339 RapA N-terminal Tudor like domain 1 VCSRO96_0403 PF18337 RapA N-terminal Tudor like domain VCSRO96_0404 PF00849 RNA pseudouridylate synthase VCSRO96_0405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO96_0405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO96_0407 PF01609 Transposase DDE domain VCSRO96_0407 PF13006 Insertion element 4 transposase N-terminal VCSRO96_0408 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO96_0408 PF10458 Valyl tRNA synthetase tRNA binding arm VCSRO96_0408 PF08264 Anticodon-binding domain of tRNA VCSRO96_0409 PF04364 DNA polymerase III chi subunit, HolC VCSRO96_0410 PF02789 Cytosol aminopeptidase family, N-terminal domain VCSRO96_0410 PF00883 Cytosol aminopeptidase family, catalytic domain VCSRO96_0411 PF03739 Lipopolysaccharide export system permease LptF/LptG VCSRO96_0412 PF03739 Lipopolysaccharide export system permease LptF/LptG VCSRO96_0415 PF00072 Response regulator receiver domain VCSRO96_0424 PF00694 Aconitase C-terminal domain VCSRO96_0425 PF00330 Aconitase family (aconitate hydratase) VCSRO96_0426 PF00180 Isocitrate/isopropylmalate dehydrogenase VCSRO96_0427 PF00682 HMGL-like VCSRO96_0427 PF08502 LeuA allosteric (dimerisation) domain VCSRO96_0429 PF01569 PAP2 superfamily VCSRO96_0431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_0431 PF03466 LysR substrate binding domain VCSRO96_0432 PF00501 AMP-binding enzyme VCSRO96_0433 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO96_0433 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO96_0433 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO96_0434 PF10369 Small subunit of acetolactate synthase VCSRO96_0435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO96_0435 PF01842 ACT domain VCSRO96_0435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO96_0436 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VCSRO96_0437 PF01812 5-formyltetrahydrofolate cyclo-ligase family VCSRO96_0438 PF05164 Cell division protein ZapA VCSRO96_0439 PF03695 Uncharacterised protein family (UPF0149) VCSRO96_0440 PF01494 FAD binding domain VCSRO96_0441 PF01494 FAD binding domain VCSRO96_0444 PF03937 Flavinator of succinate dehydrogenase VCSRO96_0446 PF00890 FAD binding domain VCSRO96_0446 PF02910 Fumarate reductase flavoprotein C-term VCSRO96_0447 PF04542 Sigma-70 region 2 VCSRO96_0447 PF08281 Sigma-70, region 4 VCSRO96_0448 PF03873 Anti sigma-E protein RseA, C-terminal domain VCSRO96_0448 PF03872 Anti sigma-E protein RseA, N-terminal domain VCSRO96_0449 PF03888 MucB/RseB N-terminal domain VCSRO96_0449 PF17188 MucB/RseB C-terminal domain VCSRO96_0451 PF00679 Elongation factor G C-terminus VCSRO96_0451 PF00009 Elongation factor Tu GTP binding domain VCSRO96_0451 PF03144 Elongation factor Tu domain 2 VCSRO96_0451 PF06421 GTP-binding protein LepA C-terminus VCSRO96_0452 PF10502 Signal peptidase, peptidase S26 VCSRO96_0453 PF00035 Double-stranded RNA binding motif VCSRO96_0453 PF14622 Ribonuclease-III-like VCSRO96_0454 PF01926 50S ribosome-binding GTPase VCSRO96_0454 PF07650 KH domain VCSRO96_0455 PF11967 Recombination protein O N terminal VCSRO96_0455 PF02565 Recombination protein O C terminal VCSRO96_0456 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VCSRO96_0457 PF01648 4'-phosphopantetheinyl transferase superfamily VCSRO96_0461 PF00563 EAL domain VCSRO96_0461 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0462 PF00072 Response regulator receiver domain VCSRO96_0462 PF00672 HAMP domain VCSRO96_0462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0462 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_0462 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VCSRO96_0462 PF01627 Hpt domain VCSRO96_0463 PF01938 TRAM domain VCSRO96_0463 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO96_0464 PF13291 ACT domain VCSRO96_0464 PF04607 Region found in RelA / SpoT proteins VCSRO96_0464 PF02824 TGS domain VCSRO96_0465 PF03819 MazG nucleotide pyrophosphohydrolase domain VCSRO96_0466 PF06418 CTP synthase N-terminus VCSRO96_0466 PF00117 Glutamine amidotransferase class-I VCSRO96_0467 PF00113 Enolase, C-terminal TIM barrel domain VCSRO96_0467 PF03952 Enolase, N-terminal domain VCSRO96_0468 PF01743 Poly A polymerase head domain VCSRO96_0468 PF01966 HD domain VCSRO96_0468 PF12627 Probable RNA and SrmB- binding site of polymerase A VCSRO96_0469 PF13401 AAA domain VCSRO96_0469 PF01471 Putative peptidoglycan binding domain VCSRO96_0471 PF08239 Bacterial SH3 domain VCSRO96_0472 PF01384 Phosphate transporter family VCSRO96_0473 PF01865 Protein of unknown function DUF47 VCSRO96_0474 PF01928 CYTH domain VCSRO96_0475 PF01609 Transposase DDE domain VCSRO96_0475 PF13006 Insertion element 4 transposase N-terminal VCSRO96_0477 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_0477 PF00672 HAMP domain VCSRO96_0477 PF02743 Cache domain VCSRO96_0478 PF03710 Glutamate-ammonia ligase adenylyltransferase VCSRO96_0478 PF08335 GlnD PII-uridylyltransferase VCSRO96_0479 PF01467 Cytidylyltransferase-like VCSRO96_0479 PF00294 pfkB family carbohydrate kinase VCSRO96_0480 PF02321 Outer membrane efflux protein VCSRO96_0481 PF00293 NUDIX domain VCSRO96_0482 PF06853 Protein of unknown function (DUF1249) VCSRO96_0483 PF00149 Calcineurin-like phosphoesterase VCSRO96_0484 PF05728 Uncharacterised protein family (UPF0227) VCSRO96_0485 PF00204 DNA gyrase B VCSRO96_0485 PF00986 DNA gyrase B subunit, carboxyl terminus VCSRO96_0485 PF01751 Toprim domain VCSRO96_0485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0486 PF00521 DNA gyrase/topoisomerase IV, subunit A VCSRO96_0486 PF03989 DNA gyrase C-terminal domain, beta-propeller VCSRO96_0487 PF03884 DNA gyrase inhibitor YacG VCSRO96_0488 PF07072 Cell division protein VCSRO96_0489 PF01121 Dephospho-CoA kinase VCSRO96_0490 PF06750 Bacterial Peptidase A24 N-terminal domain VCSRO96_0490 PF01478 Type IV leader peptidase family VCSRO96_0491 PF00482 Type II secretion system (T2SS), protein F VCSRO96_0492 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VCSRO96_0492 PF00437 Type II/IV secretion system protein VCSRO96_0493 PF07963 Prokaryotic N-terminal methylation motif VCSRO96_0493 PF00114 Pilin (bacterial filament) VCSRO96_0494 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VCSRO96_0494 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VCSRO96_0495 PF01510 N-acetylmuramoyl-L-alanine amidase VCSRO96_0496 PF00258 Flavodoxin VCSRO96_0497 PF02899 Phage integrase, N-terminal SAM-like domain VCSRO96_0497 PF00589 Phage integrase family VCSRO96_0498 PF10411 Disulfide bond isomerase protein N-terminus VCSRO96_0498 PF13098 Thioredoxin-like domain VCSRO96_0499 PF17768 RecJ OB domain VCSRO96_0499 PF02272 DHHA1 domain VCSRO96_0499 PF01368 DHH family VCSRO96_0500 PF02872 5'-nucleotidase, C-terminal domain VCSRO96_0500 PF00149 Calcineurin-like phosphoesterase VCSRO96_0501 PF07729 FCD domain VCSRO96_0501 PF00392 Bacterial regulatory proteins, gntR family VCSRO96_0502 PF17831 Pyruvate dehydrogenase E1 component middle domain VCSRO96_0502 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO96_0503 PF02817 e3 binding domain VCSRO96_0503 PF00364 Biotin-requiring enzyme VCSRO96_0503 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VCSRO96_0504 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_0504 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO96_0505 PF01795 MraW methylase family VCSRO96_0506 PF04999 Cell division protein FtsL VCSRO96_0507 PF03717 Penicillin-binding Protein dimerisation domain VCSRO96_0507 PF00905 Penicillin binding protein transpeptidase domain VCSRO96_0508 PF08245 Mur ligase middle domain VCSRO96_0508 PF02875 Mur ligase family, glutamate ligase domain VCSRO96_0508 PF01225 Mur ligase family, catalytic domain VCSRO96_0509 PF02875 Mur ligase family, glutamate ligase domain VCSRO96_0509 PF01225 Mur ligase family, catalytic domain VCSRO96_0509 PF08245 Mur ligase middle domain VCSRO96_0510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VCSRO96_0510 PF00953 Glycosyl transferase family 4 VCSRO96_0511 PF02875 Mur ligase family, glutamate ligase domain VCSRO96_0511 PF08245 Mur ligase middle domain VCSRO96_0512 PF01098 Cell cycle protein VCSRO96_0513 PF04101 Glycosyltransferase family 28 C-terminal domain VCSRO96_0513 PF03033 Glycosyltransferase family 28 N-terminal domain VCSRO96_0514 PF01225 Mur ligase family, catalytic domain VCSRO96_0514 PF02875 Mur ligase family, glutamate ligase domain VCSRO96_0514 PF08245 Mur ligase middle domain VCSRO96_0515 PF03799 Cell division protein FtsQ VCSRO96_0515 PF08478 POTRA domain, FtsQ-type VCSRO96_0516 PF02491 SHS2 domain inserted in FTSA VCSRO96_0517 PF12327 FtsZ family, C-terminal domain VCSRO96_0517 PF00091 Tubulin/FtsZ family, GTPase domain VCSRO96_0518 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VCSRO96_0520 PF01043 SecA preprotein cross-linking domain VCSRO96_0520 PF07517 SecA DEAD-like domain VCSRO96_0520 PF07516 SecA Wing and Scaffold domain VCSRO96_0520 PF02810 SEC-C motif VCSRO96_0521 PF00293 NUDIX domain VCSRO96_0522 PF05173 Dihydrodipicolinate reductase, C-terminus VCSRO96_0522 PF01113 Dihydrodipicolinate reductase, N-terminus VCSRO96_0523 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VCSRO96_0523 PF00117 Glutamine amidotransferase class-I VCSRO96_0524 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VCSRO96_0524 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VCSRO96_0524 PF02142 MGS-like domain VCSRO96_0527 PF01925 Sulfite exporter TauE/SafE VCSRO96_0528 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_0528 PF03466 LysR substrate binding domain VCSRO96_0529 PF03458 UPF0126 domain VCSRO96_0530 PF01497 Periplasmic binding protein VCSRO96_0532 PF01048 Phosphorylase superfamily VCSRO96_0534 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_0534 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VCSRO96_0535 PF01493 GXGXG motif VCSRO96_0535 PF01645 Conserved region in glutamate synthase VCSRO96_0535 PF04898 Glutamate synthase central domain VCSRO96_0535 PF00310 Glutamine amidotransferases class-II VCSRO96_0536 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_0536 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VCSRO96_0537 PF00310 Glutamine amidotransferases class-II VCSRO96_0537 PF04898 Glutamate synthase central domain VCSRO96_0537 PF01645 Conserved region in glutamate synthase VCSRO96_0537 PF01493 GXGXG motif VCSRO96_0538 PF04055 Radical SAM superfamily VCSRO96_0538 PF16199 Radical_SAM C-terminal domain VCSRO96_0539 PF01590 GAF domain VCSRO96_0539 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0539 PF00360 Phytochrome region VCSRO96_0539 PF00563 EAL domain VCSRO96_0540 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_0540 PF18415 Histidine kinase receptor ArcB trans-membrane domain VCSRO96_0540 PF01627 Hpt domain VCSRO96_0540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0540 PF00072 Response regulator receiver domain VCSRO96_0540 PF00989 PAS fold VCSRO96_0541 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_0541 PF00072 Response regulator receiver domain VCSRO96_0543 PF03737 Aldolase/RraA VCSRO96_0545 PF00696 Amino acid kinase family VCSRO96_0545 PF01842 ACT domain VCSRO96_0545 PF13840 ACT domain VCSRO96_0545 PF00742 Homoserine dehydrogenase VCSRO96_0545 PF03447 Homoserine dehydrogenase, NAD binding domain VCSRO96_0546 PF08544 GHMP kinases C terminal VCSRO96_0546 PF00288 GHMP kinases N terminal domain VCSRO96_0547 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO96_0547 PF14821 Threonine synthase N terminus VCSRO96_0548 PF01228 Glycine radical VCSRO96_0549 PF01261 Xylose isomerase-like TIM barrel VCSRO96_0550 PF03167 Uracil DNA glycosylase superfamily VCSRO96_0553 PF01235 Sodium:alanine symporter family VCSRO96_0554 PF03883 Peroxide stress protein YaaA VCSRO96_0556 PF01026 TatD related DNase VCSRO96_0557 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO96_0557 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO96_0557 PF07670 Nucleoside recognition VCSRO96_0558 PF01791 DeoC/LacD family aldolase VCSRO96_0559 PF00591 Glycosyl transferase family, a/b domain VCSRO96_0559 PF02885 Glycosyl transferase family, helical bundle domain VCSRO96_0559 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VCSRO96_0560 PF01676 Metalloenzyme superfamily VCSRO96_0561 PF01048 Phosphorylase superfamily VCSRO96_0563 PF18429 Domain of unknown function (DUF5609) VCSRO96_0565 PF18073 Rubredoxin metal binding domain VCSRO96_0566 PF00679 Elongation factor G C-terminus VCSRO96_0566 PF14492 Elongation Factor G, domain II VCSRO96_0566 PF03764 Elongation factor G, domain IV VCSRO96_0566 PF00009 Elongation factor Tu GTP binding domain VCSRO96_0566 PF03144 Elongation factor Tu domain 2 VCSRO96_0567 PF00501 AMP-binding enzyme VCSRO96_0568 PF00072 Response regulator receiver domain VCSRO96_0570 PF02837 Glycosyl hydrolases family 2, sugar binding domain VCSRO96_0570 PF16353 Domain of unknown function(DUF4981) VCSRO96_0570 PF02929 Beta galactosidase small chain VCSRO96_0570 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VCSRO96_0570 PF00703 Glycosyl hydrolases family 2 VCSRO96_0571 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_0572 PF01588 Putative tRNA binding domain VCSRO96_0574 PF01544 CorA-like Mg2+ transporter protein VCSRO96_0575 PF18030 RimK PreATP-grasp domain VCSRO96_0575 PF02080 TrkA-C domain VCSRO96_0575 PF08443 RimK-like ATP-grasp domain VCSRO96_0577 PF00583 Acetyltransferase (GNAT) family VCSRO96_0579 PF14602 Hexapeptide repeat of succinyl-transferase VCSRO96_0579 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VCSRO96_0580 PF07130 YebG protein VCSRO96_0583 PF17946 RecC C-terminal domain VCSRO96_0584 PF13361 UvrD-like helicase C-terminal domain VCSRO96_0584 PF12705 PD-(D/E)XK nuclease superfamily VCSRO96_0584 PF00580 UvrD/REP helicase N-terminal domain VCSRO96_0585 PF13538 UvrD-like helicase C-terminal domain VCSRO96_0587 PF00696 Amino acid kinase family VCSRO96_0587 PF00583 Acetyltransferase (GNAT) family VCSRO96_0589 PF06725 3D domain VCSRO96_0589 PF03562 MltA specific insert domain VCSRO96_0590 PF00899 ThiF family VCSRO96_0591 PF02657 Fe-S metabolism associated domain VCSRO96_0592 PF00266 Aminotransferase class-V VCSRO96_0593 PF01965 DJ-1/PfpI family VCSRO96_0594 PF02558 Ketopantoate reductase PanE/ApbA VCSRO96_0594 PF08546 Ketopantoate reductase PanE/ApbA C terminal VCSRO96_0595 PF13006 Insertion element 4 transposase N-terminal VCSRO96_0595 PF01609 Transposase DDE domain VCSRO96_0596 PF03502 Nucleoside-specific channel-forming protein, Tsx VCSRO96_0598 PF04545 Sigma-70, region 4 VCSRO96_0598 PF04542 Sigma-70 region 2 VCSRO96_0600 PF07690 Major Facilitator Superfamily VCSRO96_0601 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VCSRO96_0603 PF05175 Methyltransferase small domain VCSRO96_0604 PF01722 BolA-like protein VCSRO96_0605 PF11973 NQRA C-terminal domain VCSRO96_0605 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VCSRO96_0606 PF03116 NQR2, RnfD, RnfE family VCSRO96_0607 PF04205 FMN-binding domain VCSRO96_0608 PF02508 Rnf-Nqr subunit, membrane protein VCSRO96_0609 PF02508 Rnf-Nqr subunit, membrane protein VCSRO96_0610 PF00175 Oxidoreductase NAD-binding domain VCSRO96_0610 PF00970 Oxidoreductase FAD-binding domain VCSRO96_0610 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO96_0611 PF02424 ApbE family VCSRO96_0613 PF00817 impB/mucB/samB family VCSRO96_0613 PF11798 IMS family HHH motif VCSRO96_0615 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0615 PF17158 Membrane-associated sensor, integral membrane domain VCSRO96_0616 PF00209 Sodium:neurotransmitter symporter family VCSRO96_0617 PF13006 Insertion element 4 transposase N-terminal VCSRO96_0617 PF01609 Transposase DDE domain VCSRO96_0619 PF18030 RimK PreATP-grasp domain VCSRO96_0619 PF08443 RimK-like ATP-grasp domain VCSRO96_0620 PF08443 RimK-like ATP-grasp domain VCSRO96_0620 PF18030 RimK PreATP-grasp domain VCSRO96_0621 PF07687 Peptidase dimerisation domain VCSRO96_0621 PF01546 Peptidase family M20/M25/M40 VCSRO96_0622 PF00860 Permease family VCSRO96_0623 PF00156 Phosphoribosyl transferase domain VCSRO96_0624 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VCSRO96_0625 PF07417 Sigma factor-binding transcriptional regulator Crl VCSRO96_0626 PF00696 Amino acid kinase family VCSRO96_0626 PF01472 PUA domain VCSRO96_0627 PF00171 Aldehyde dehydrogenase family VCSRO96_0628 PF03477 ATP cone domain VCSRO96_0629 PF01872 RibD C-terminal domain VCSRO96_0629 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO96_0630 PF00677 Lumazine binding domain VCSRO96_0631 PF00925 GTP cyclohydrolase II VCSRO96_0631 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VCSRO96_0632 PF00885 6,7-dimethyl-8-ribityllumazine synthase VCSRO96_0633 PF01029 NusB family VCSRO96_0634 PF00586 AIR synthase related protein, N-terminal domain VCSRO96_0634 PF02769 AIR synthase related protein, C-terminal domain VCSRO96_0635 PF04608 Phosphatidylglycerophosphatase A VCSRO96_0636 PF11944 Protein of unknown function (DUF3461) VCSRO96_0637 PF08335 GlnD PII-uridylyltransferase VCSRO96_0637 PF01966 HD domain VCSRO96_0637 PF01909 Nucleotidyltransferase domain VCSRO96_0638 PF00557 Metallopeptidase family M24 VCSRO96_0639 PF00318 Ribosomal protein S2 VCSRO96_0640 PF00889 Elongation factor TS VCSRO96_0641 PF00696 Amino acid kinase family VCSRO96_0642 PF01765 Ribosome recycling factor VCSRO96_0643 PF01255 Putative undecaprenyl diphosphate synthase VCSRO96_0645 PF13288 DXP reductoisomerase C-terminal domain VCSRO96_0645 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VCSRO96_0645 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VCSRO96_0646 PF17820 PDZ domain VCSRO96_0646 PF02163 Peptidase family M50 VCSRO96_0647 PF01103 Surface antigen VCSRO96_0647 PF07244 Surface antigen variable number repeat VCSRO96_0648 PF03938 Outer membrane protein (OmpH-like) VCSRO96_0649 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_0649 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VCSRO96_0650 PF07977 FabA-like domain VCSRO96_0651 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VCSRO96_0651 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_0652 PF02684 Lipid-A-disaccharide synthetase VCSRO96_0653 PF01351 Ribonuclease HII VCSRO96_0654 PF07733 Bacterial DNA polymerase III alpha NTPase domain VCSRO96_0654 PF14579 Helix-hairpin-helix motif VCSRO96_0654 PF02811 PHP domain VCSRO96_0654 PF01336 OB-fold nucleic acid binding domain VCSRO96_0654 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VCSRO96_0655 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VCSRO96_0656 PF01171 PP-loop family VCSRO96_0656 PF11734 TilS substrate C-terminal domain VCSRO96_0656 PF09179 TilS substrate binding domain VCSRO96_0657 PF00034 Cytochrome c VCSRO96_0658 PF05870 Phenolic acid decarboxylase (PAD) VCSRO96_0659 PF00543 Nitrogen regulatory protein P-II VCSRO96_0660 PF03372 Endonuclease/Exonuclease/phosphatase family VCSRO96_0661 PF01476 LysM domain VCSRO96_0661 PF01464 Transglycosylase SLT domain VCSRO96_0662 PF16123 Hydroxyacylglutathione hydrolase C-terminus VCSRO96_0662 PF00753 Metallo-beta-lactamase superfamily VCSRO96_0663 PF08241 Methyltransferase domain VCSRO96_0664 PF00075 RNase H VCSRO96_0665 PF00929 Exonuclease VCSRO96_0667 PF13006 Insertion element 4 transposase N-terminal VCSRO96_0667 PF01609 Transposase DDE domain VCSRO96_0668 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCSRO96_0668 PF02770 Acyl-CoA dehydrogenase, middle domain VCSRO96_0668 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCSRO96_0668 PF09317 Domain of unknown function (DUF1974) VCSRO96_0669 PF13580 SIS domain VCSRO96_0670 PF13230 Glutamine amidotransferases class-II VCSRO96_0671 PF00551 Formyl transferase VCSRO96_0672 PF00586 AIR synthase related protein, N-terminal domain VCSRO96_0672 PF02769 AIR synthase related protein, C-terminal domain VCSRO96_0674 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0675 PF01479 S4 domain VCSRO96_0675 PF00849 RNA pseudouridylate synthase VCSRO96_0676 PF01713 Smr domain VCSRO96_0680 PF03173 Putative carbohydrate binding domain VCSRO96_0680 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VCSRO96_0680 PF00728 Glycosyl hydrolase family 20, catalytic domain VCSRO96_0680 PF02838 Glycosyl hydrolase family 20, domain 2 VCSRO96_0682 PF00403 Heavy-metal-associated domain VCSRO96_0683 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO96_0684 PF00691 OmpA family VCSRO96_0684 PF01389 OmpA-like transmembrane domain VCSRO96_0686 PF07715 TonB-dependent Receptor Plug Domain VCSRO96_0687 PF08021 Siderophore-interacting FAD-binding domain VCSRO96_0687 PF04954 Siderophore-interacting protein VCSRO96_0688 PF00501 AMP-binding enzyme VCSRO96_0688 PF00668 Condensation domain VCSRO96_0688 PF08242 Methyltransferase domain VCSRO96_0688 PF00550 Phosphopantetheine attachment site VCSRO96_0695 PF00072 Response regulator receiver domain VCSRO96_0695 PF01584 CheW-like domain VCSRO96_0696 PF01739 CheR methyltransferase, SAM binding domain VCSRO96_0696 PF03705 CheR methyltransferase, all-alpha domain VCSRO96_0697 PF00460 Flagella basal body rod protein VCSRO96_0698 PF00460 Flagella basal body rod protein VCSRO96_0698 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO96_0699 PF03963 Flagellar hook capping protein - N-terminal region VCSRO96_0699 PF13860 FlgD Ig-like domain VCSRO96_0699 PF13861 FlgD Tudor-like domain VCSRO96_0700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO96_0700 PF07559 Flagellar basal body protein FlaE VCSRO96_0700 PF00460 Flagella basal body rod protein VCSRO96_0701 PF00460 Flagella basal body rod protein VCSRO96_0701 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO96_0702 PF00460 Flagella basal body rod protein VCSRO96_0702 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO96_0703 PF02107 Flagellar L-ring protein VCSRO96_0704 PF02119 Flagellar P-ring protein VCSRO96_0705 PF10135 Rod binding protein VCSRO96_0705 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VCSRO96_0706 PF07196 Flagellin hook IN motif VCSRO96_0706 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VCSRO96_0708 PF00669 Bacterial flagellin N-terminal helical region VCSRO96_0708 PF00700 Bacterial flagellin C-terminal helical region VCSRO96_0708 PF07196 Flagellin hook IN motif VCSRO96_0709 PF07196 Flagellin hook IN motif VCSRO96_0709 PF00669 Bacterial flagellin N-terminal helical region VCSRO96_0709 PF00700 Bacterial flagellin C-terminal helical region VCSRO96_0726 PF01926 50S ribosome-binding GTPase VCSRO96_0726 PF06071 Protein of unknown function (DUF933) VCSRO96_0727 PF01195 Peptidyl-tRNA hydrolase VCSRO96_0728 PF14572 Phosphoribosyl synthetase-associated domain VCSRO96_0728 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VCSRO96_0729 PF08544 GHMP kinases C terminal VCSRO96_0729 PF00288 GHMP kinases N terminal domain VCSRO96_0730 PF03550 Outer membrane lipoprotein LolB VCSRO96_0731 PF01488 Shikimate / quinate 5-dehydrogenase VCSRO96_0731 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VCSRO96_0731 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VCSRO96_0732 PF03462 PCRF domain VCSRO96_0732 PF00472 RF-1 domain VCSRO96_0733 PF17827 PrmC N-terminal domain VCSRO96_0733 PF13847 Methyltransferase domain VCSRO96_0734 PF04247 Invasion gene expression up-regulator, SirB VCSRO96_0735 PF13369 Transglutaminase-like superfamily VCSRO96_0736 PF00793 DAHP synthetase I family VCSRO96_0737 PF00149 Calcineurin-like phosphoesterase VCSRO96_0737 PF02872 5'-nucleotidase, C-terminal domain VCSRO96_0738 PF04073 Aminoacyl-tRNA editing domain VCSRO96_0739 PF00860 Permease family VCSRO96_0742 PF03358 NADPH-dependent FMN reductase VCSRO96_0743 PF03960 ArsC family VCSRO96_0744 PF01435 Peptidase family M48 VCSRO96_0744 PF13181 Tetratricopeptide repeat VCSRO96_0746 PF01594 AI-2E family transporter VCSRO96_0747 PF00672 HAMP domain VCSRO96_0747 PF02743 Cache domain VCSRO96_0747 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_0748 PF00578 AhpC/TSA family VCSRO96_0750 PF00701 Dihydrodipicolinate synthetase family VCSRO96_0751 PF06804 NlpB/DapX lipoprotein VCSRO96_0753 PF02557 D-alanyl-D-alanine carboxypeptidase VCSRO96_0754 PF07687 Peptidase dimerisation domain VCSRO96_0754 PF01546 Peptidase family M20/M25/M40 VCSRO96_0755 PF03960 ArsC family VCSRO96_0758 PF11143 Protein of unknown function (DUF2919) VCSRO96_0759 PF04261 Dyp-type peroxidase family VCSRO96_0760 PF00669 Bacterial flagellin N-terminal helical region VCSRO96_0760 PF07196 Flagellin hook IN motif VCSRO96_0760 PF00700 Bacterial flagellin C-terminal helical region VCSRO96_0761 PF07196 Flagellin hook IN motif VCSRO96_0761 PF00669 Bacterial flagellin N-terminal helical region VCSRO96_0761 PF00700 Bacterial flagellin C-terminal helical region VCSRO96_0762 PF07196 Flagellin hook IN motif VCSRO96_0762 PF00669 Bacterial flagellin N-terminal helical region VCSRO96_0762 PF00700 Bacterial flagellin C-terminal helical region VCSRO96_0763 PF03646 FlaG protein VCSRO96_0764 PF07196 Flagellin hook IN motif VCSRO96_0764 PF07195 Flagellar hook-associated protein 2 C-terminus VCSRO96_0764 PF02465 Flagellar hook-associated protein 2 N-terminus VCSRO96_0766 PF02561 Flagellar protein FliS VCSRO96_0767 PF06490 Flagellar regulatory protein FleQ VCSRO96_0767 PF00158 Sigma-54 interaction domain VCSRO96_0767 PF02954 Bacterial regulatory protein, Fis family VCSRO96_0768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0768 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_0768 PF13188 PAS domain VCSRO96_0769 PF00158 Sigma-54 interaction domain VCSRO96_0769 PF02954 Bacterial regulatory protein, Fis family VCSRO96_0769 PF00072 Response regulator receiver domain VCSRO96_0770 PF02049 Flagellar hook-basal body complex protein FliE VCSRO96_0771 PF08345 Flagellar M-ring protein C-terminal VCSRO96_0771 PF01514 Secretory protein of YscJ/FliF family VCSRO96_0772 PF14842 FliG N-terminal domain VCSRO96_0772 PF14841 FliG middle domain VCSRO96_0772 PF01706 FliG C-terminal domain VCSRO96_0773 PF02108 Flagellar assembly protein FliH VCSRO96_0774 PF18269 T3SS EscN ATPase C-terminal domain VCSRO96_0774 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO96_0777 PF03748 Flagellar basal body-associated protein FliL VCSRO96_0778 PF02154 Flagellar motor switch protein FliM VCSRO96_0778 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VCSRO96_0779 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VCSRO96_0780 PF04347 Flagellar biosynthesis protein, FliO VCSRO96_0781 PF00813 FliP family VCSRO96_0782 PF01313 Bacterial export proteins, family 3 VCSRO96_0783 PF01311 Bacterial export proteins, family 1 VCSRO96_0784 PF01312 FlhB HrpN YscU SpaS Family VCSRO96_0785 PF01713 Smr domain VCSRO96_0786 PF05175 Methyltransferase small domain VCSRO96_0787 PF01264 Chorismate synthase VCSRO96_0788 PF03458 UPF0126 domain VCSRO96_0789 PF04315 Elongation factor P hydroxylase VCSRO96_0790 PF08891 YfcL protein VCSRO96_0791 PF03358 NADPH-dependent FMN reductase VCSRO96_0792 PF01266 FAD dependent oxidoreductase VCSRO96_0792 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VCSRO96_0793 PF00109 Beta-ketoacyl synthase, N-terminal domain VCSRO96_0793 PF02801 Beta-ketoacyl synthase, C-terminal domain VCSRO96_0794 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO96_0794 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO96_0794 PF11890 Domain of unknown function (DUF3410) VCSRO96_0795 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO96_0795 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO96_0796 PF01475 Ferric uptake regulator family VCSRO96_0798 PF03466 LysR substrate binding domain VCSRO96_0798 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_0799 PF03788 LrgA family VCSRO96_0800 PF04172 LrgB-like family VCSRO96_0801 PF01609 Transposase DDE domain VCSRO96_0801 PF13006 Insertion element 4 transposase N-terminal VCSRO96_0802 PF00258 Flavodoxin VCSRO96_0804 PF12697 Alpha/beta hydrolase family VCSRO96_0805 PF03925 SeqA protein C-terminal domain VCSRO96_0805 PF17206 SeqA protein N-terminal domain VCSRO96_0806 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO96_0806 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO96_0806 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO96_0806 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO96_0808 PF01784 NIF3 (NGG1p interacting factor 3) VCSRO96_0809 PF00285 Citrate synthase, C-terminal domain VCSRO96_0810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VCSRO96_0811 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VCSRO96_0812 PF02910 Fumarate reductase flavoprotein C-term VCSRO96_0812 PF00890 FAD binding domain VCSRO96_0813 PF13085 2Fe-2S iron-sulfur cluster binding domain VCSRO96_0814 PF16078 2-oxoglutarate dehydrogenase N-terminus VCSRO96_0814 PF00676 Dehydrogenase E1 component VCSRO96_0814 PF16870 2-oxoglutarate dehydrogenase C-terminal VCSRO96_0814 PF02779 Transketolase, pyrimidine binding domain VCSRO96_0815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VCSRO96_0815 PF00364 Biotin-requiring enzyme VCSRO96_0815 PF02817 e3 binding domain VCSRO96_0816 PF08442 ATP-grasp domain VCSRO96_0816 PF00549 CoA-ligase VCSRO96_0817 PF02629 CoA binding domain VCSRO96_0817 PF00549 CoA-ligase VCSRO96_0818 PF00950 ABC 3 transport family VCSRO96_0819 PF00005 ABC transporter VCSRO96_0820 PF01297 Zinc-uptake complex component A periplasmic VCSRO96_0821 PF12833 Helix-turn-helix domain VCSRO96_0821 PF02311 AraC-like ligand binding domain VCSRO96_0822 PF04023 FeoA domain VCSRO96_0823 PF02421 Ferrous iron transport protein B VCSRO96_0823 PF07664 Ferrous iron transport protein B C terminus VCSRO96_0823 PF07670 Nucleoside recognition VCSRO96_0826 PF00750 tRNA synthetases class I (R) VCSRO96_0826 PF05746 DALR anticodon binding domain VCSRO96_0826 PF03485 Arginyl tRNA synthetase N terminal domain VCSRO96_0828 PF05193 Peptidase M16 inactive domain VCSRO96_0828 PF00675 Insulinase (Peptidase family M16) VCSRO96_0829 PF00300 Histidine phosphatase superfamily (branch 1) VCSRO96_0830 PF00771 FHIPEP family VCSRO96_0831 PF00448 SRP54-type protein, GTPase domain VCSRO96_0832 PF10609 NUBPL iron-transfer P-loop NTPase VCSRO96_0833 PF04545 Sigma-70, region 4 VCSRO96_0833 PF04539 Sigma-70 region 3 VCSRO96_0833 PF04542 Sigma-70 region 2 VCSRO96_0834 PF00072 Response regulator receiver domain VCSRO96_0835 PF04344 Chemotaxis phosphatase, CheZ VCSRO96_0836 PF01584 CheW-like domain VCSRO96_0836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0836 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO96_0836 PF01627 Hpt domain VCSRO96_0836 PF00072 Response regulator receiver domain VCSRO96_0837 PF01339 CheB methylesterase VCSRO96_0837 PF00072 Response regulator receiver domain VCSRO96_0838 PF13614 AAA domain VCSRO96_0840 PF01584 CheW-like domain VCSRO96_0842 PF00005 ABC transporter VCSRO96_0843 PF03379 CcmB protein VCSRO96_0844 PF01578 Cytochrome C assembly protein VCSRO96_0845 PF04995 Heme exporter protein D (CcmD) VCSRO96_0846 PF03100 CcmE VCSRO96_0847 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VCSRO96_0847 PF01578 Cytochrome C assembly protein VCSRO96_0848 PF08534 Redoxin VCSRO96_0849 PF03918 Cytochrome C biogenesis protein VCSRO96_0851 PF04333 MlaA lipoprotein VCSRO96_0854 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VCSRO96_0854 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VCSRO96_0855 PF00462 Glutaredoxin VCSRO96_0856 PF01131 DNA topoisomerase VCSRO96_0856 PF01751 Toprim domain VCSRO96_0857 PF00850 Histone deacetylase domain VCSRO96_0860 PF11893 Domain of unknown function (DUF3413) VCSRO96_0860 PF00884 Sulfatase VCSRO96_0861 PF07208 Protein of unknown function (DUF1414) VCSRO96_0862 PF04245 37-kD nucleoid-associated bacterial protein VCSRO96_0864 PF03553 Na+/H+ antiporter family VCSRO96_0865 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCSRO96_0865 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCSRO96_0866 PF01914 MarC family integral membrane protein VCSRO96_0867 PF00171 Aldehyde dehydrogenase family VCSRO96_0867 PF00465 Iron-containing alcohol dehydrogenase VCSRO96_0869 PF01740 STAS domain VCSRO96_0869 PF00916 Sulfate permease family VCSRO96_0870 PF12111 Polyribonucleotide phosphorylase C terminal VCSRO96_0870 PF10150 Ribonuclease E/G family VCSRO96_0870 PF00575 S1 RNA binding domain VCSRO96_0871 PF01479 S4 domain VCSRO96_0871 PF00849 RNA pseudouridylate synthase VCSRO96_0872 PF02545 Maf-like protein VCSRO96_0873 PF02620 Large ribosomal RNA subunit accumulation protein YceD VCSRO96_0874 PF01783 Ribosomal L32p protein family VCSRO96_0875 PF02504 Fatty acid synthesis protein VCSRO96_0876 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCSRO96_0876 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VCSRO96_0877 PF00698 Acyl transferase domain VCSRO96_0879 PF00550 Phosphopantetheine attachment site VCSRO96_0880 PF00109 Beta-ketoacyl synthase, N-terminal domain VCSRO96_0880 PF02801 Beta-ketoacyl synthase, C-terminal domain VCSRO96_0881 PF01063 Amino-transferase class IV VCSRO96_0882 PF02618 YceG-like family VCSRO96_0883 PF02223 Thymidylate kinase VCSRO96_0884 PF09115 DNA polymerase III, delta subunit, C terminal VCSRO96_0885 PF01026 TatD related DNase VCSRO96_0886 PF00367 phosphotransferase system, EIIB VCSRO96_0886 PF02378 Phosphotransferase system, EIIC VCSRO96_0888 PF00209 Sodium:neurotransmitter symporter family VCSRO96_0891 PF01734 Patatin-like phospholipase VCSRO96_0892 PF00224 Pyruvate kinase, barrel domain VCSRO96_0892 PF02887 Pyruvate kinase, alpha/beta domain VCSRO96_0893 PF00480 ROK family VCSRO96_0894 PF01584 CheW-like domain VCSRO96_0894 PF00072 Response regulator receiver domain VCSRO96_0897 PF13847 Methyltransferase domain VCSRO96_0899 PF01263 Aldose 1-epimerase VCSRO96_0900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO96_0900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO96_0901 PF01641 SelR domain VCSRO96_0903 PF07023 Protein of unknown function (DUF1315) VCSRO96_0904 PF00710 Asparaginase, N-terminal VCSRO96_0904 PF17763 Glutaminase/Asparaginase C-terminal domain VCSRO96_0905 PF01343 Peptidase family S49 VCSRO96_0906 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCSRO96_0906 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_0907 PF01842 ACT domain VCSRO96_0907 PF00551 Formyl transferase VCSRO96_0909 PF13307 Helicase C-terminal domain VCSRO96_0909 PF04851 Type III restriction enzyme, res subunit VCSRO96_0910 PF00814 Glycoprotease family VCSRO96_0913 PF00561 alpha/beta hydrolase fold VCSRO96_0914 PF00501 AMP-binding enzyme VCSRO96_0914 PF13193 AMP-binding enzyme C-terminal domain VCSRO96_0915 PF01612 3'-5' exonuclease VCSRO96_0915 PF00570 HRDC domain VCSRO96_0919 PF01966 HD domain VCSRO96_0919 PF13286 Phosphohydrolase-associated domain VCSRO96_0921 PF00155 Aminotransferase class I and II VCSRO96_0922 PF00425 chorismate binding enzyme VCSRO96_0923 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO96_0923 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO96_0923 PF16582 Middle domain of thiamine pyrophosphate VCSRO96_0924 PF12697 Alpha/beta hydrolase family VCSRO96_0925 PF00378 Enoyl-CoA hydratase/isomerase VCSRO96_0926 PF13378 Enolase C-terminal domain-like VCSRO96_0927 PF13193 AMP-binding enzyme C-terminal domain VCSRO96_0927 PF00501 AMP-binding enzyme VCSRO96_0928 PF03594 Benzoate membrane transport protein VCSRO96_0929 PF07883 Cupin domain VCSRO96_0929 PF01381 Helix-turn-helix VCSRO96_0930 PF00672 HAMP domain VCSRO96_0930 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_0930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_0932 PF07690 Major Facilitator Superfamily VCSRO96_0937 PF13006 Insertion element 4 transposase N-terminal VCSRO96_0937 PF01609 Transposase DDE domain VCSRO96_0938 PF04170 NlpE N-terminal domain VCSRO96_0939 PF03776 Septum formation topological specificity factor MinE VCSRO96_0940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VCSRO96_0941 PF05209 Septum formation inhibitor MinC, N-terminal domain VCSRO96_0941 PF03775 Septum formation inhibitor MinC, C-terminal domain VCSRO96_0942 PF05166 YcgL domain VCSRO96_0943 PF13406 Transglycosylase SLT domain VCSRO96_0944 PF03466 LysR substrate binding domain VCSRO96_0944 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_0945 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO96_0945 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO96_0945 PF07670 Nucleoside recognition VCSRO96_0946 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO96_0947 PF00384 Molybdopterin oxidoreductase VCSRO96_0947 PF01568 Molydopterin dinucleotide binding domain VCSRO96_0947 PF18364 Molybdopterin oxidoreductase N-terminal domain VCSRO96_0949 PF03466 LysR substrate binding domain VCSRO96_0949 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_0951 PF01494 FAD binding domain VCSRO96_0952 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VCSRO96_0953 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VCSRO96_0953 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VCSRO96_0962 PF00563 EAL domain VCSRO96_0962 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_0962 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_0965 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VCSRO96_0966 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO96_0967 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VCSRO96_0968 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCSRO96_0969 PF00158 Sigma-54 interaction domain VCSRO96_0969 PF00072 Response regulator receiver domain VCSRO96_0969 PF02954 Bacterial regulatory protein, Fis family VCSRO96_0970 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_0970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_0971 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO96_0971 PF05697 Bacterial trigger factor protein (TF) VCSRO96_0971 PF05698 Bacterial trigger factor protein (TF) C-terminus VCSRO96_0972 PF00574 Clp protease VCSRO96_0973 PF06689 ClpX C4-type zinc finger VCSRO96_0973 PF07724 AAA domain (Cdc48 subfamily) VCSRO96_0973 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO96_0974 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO96_0974 PF02190 ATP-dependent protease La (LON) substrate-binding domain VCSRO96_0974 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO96_0975 PF00216 Bacterial DNA-binding protein VCSRO96_0976 PF13145 PPIC-type PPIASE domain VCSRO96_0978 PF02224 Cytidylate kinase VCSRO96_0979 PF00575 S1 RNA binding domain VCSRO96_0980 PF00216 Bacterial DNA-binding protein VCSRO96_0981 PF06305 Lipopolysaccharide assembly protein A domain VCSRO96_0982 PF18073 Rubredoxin metal binding domain VCSRO96_0983 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VCSRO96_0984 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VCSRO96_0986 PF03466 LysR substrate binding domain VCSRO96_0986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_0988 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VCSRO96_0988 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VCSRO96_0989 PF01037 Lrp/AsnC ligand binding domain VCSRO96_0990 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VCSRO96_0990 PF17854 FtsK alpha domain VCSRO96_0990 PF09397 Ftsk gamma domain VCSRO96_0990 PF01580 FtsK/SpoIIIE family VCSRO96_0991 PF02600 Disulfide bond formation protein DsbB VCSRO96_0992 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VCSRO96_0993 PF00392 Bacterial regulatory proteins, gntR family VCSRO96_0993 PF07840 FadR C-terminal domain VCSRO96_0996 PF00672 HAMP domain VCSRO96_0996 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_0997 PF01230 HIT domain VCSRO96_1000 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VCSRO96_1000 PF13036 Peptidoglycan-synthase activator LpoB VCSRO96_1002 PF05728 Uncharacterised protein family (UPF0227) VCSRO96_1003 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_1005 PF16458 Beta-prism lectin VCSRO96_1005 PF07968 Leukocidin/Hemolysin toxin family VCSRO96_1005 PF12563 Hemolytic toxin N terminal VCSRO96_1007 PF02559 CarD-like/TRCF domain VCSRO96_1007 PF00270 DEAD/DEAH box helicase VCSRO96_1007 PF00271 Helicase conserved C-terminal domain VCSRO96_1007 PF03461 TRCF domain VCSRO96_1007 PF17757 UvrB interaction domain VCSRO96_1009 PF12704 MacB-like periplasmic core domain VCSRO96_1009 PF02687 FtsX-like permease family VCSRO96_1010 PF00005 ABC transporter VCSRO96_1011 PF12704 MacB-like periplasmic core domain VCSRO96_1011 PF02687 FtsX-like permease family VCSRO96_1013 PF03772 Competence protein VCSRO96_1013 PF13567 Domain of unknown function (DUF4131) VCSRO96_1013 PF00753 Metallo-beta-lactamase superfamily VCSRO96_1014 PF00664 ABC transporter transmembrane region VCSRO96_1014 PF00005 ABC transporter VCSRO96_1015 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VCSRO96_1016 PF03966 Trm112p-like protein VCSRO96_1017 PF02348 Cytidylyltransferase VCSRO96_1018 PF04293 SpoVR like protein VCSRO96_1019 PF04285 Protein of unknown function (DUF444) VCSRO96_1020 PF08298 PrkA AAA domain VCSRO96_1020 PF06798 PrkA serine protein kinase C-terminal domain VCSRO96_1021 PF03887 YfbU domain VCSRO96_1023 PF04055 Radical SAM superfamily VCSRO96_1024 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1024 PF00672 HAMP domain VCSRO96_1024 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_1026 PF01228 Glycine radical VCSRO96_1026 PF02901 Pyruvate formate lyase-like VCSRO96_1029 PF00005 ABC transporter VCSRO96_1030 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_1031 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1032 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1033 PF03372 Endonuclease/Exonuclease/phosphatase family VCSRO96_1034 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1034 PF00672 HAMP domain VCSRO96_1035 PF10689 Protein of unknown function (DUF2496) VCSRO96_1036 PF07445 Primosomal replication protein priC VCSRO96_1037 PF01925 Sulfite exporter TauE/SafE VCSRO96_1038 PF06733 DEAD_2 VCSRO96_1038 PF13307 Helicase C-terminal domain VCSRO96_1039 PF13609 Gram-negative porin VCSRO96_1040 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO96_1041 PF02810 SEC-C motif VCSRO96_1042 PF08668 HDOD domain VCSRO96_1042 PF00563 EAL domain VCSRO96_1043 PF00149 Calcineurin-like phosphoesterase VCSRO96_1044 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VCSRO96_1045 PF01406 tRNA synthetases class I (C) catalytic domain VCSRO96_1045 PF09190 DALR domain VCSRO96_1046 PF02075 Crossover junction endodeoxyribonuclease RuvC VCSRO96_1047 PF01330 RuvA N terminal domain VCSRO96_1047 PF07499 RuvA, C-terminal domain VCSRO96_1048 PF05491 RuvB C-terminal winged helix domain VCSRO96_1048 PF17864 RuvB AAA lid domain VCSRO96_1048 PF05496 Holliday junction DNA helicase RuvB P-loop domain VCSRO96_1050 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO96_1051 PF02322 Cytochrome bd terminal oxidase subunit II VCSRO96_1052 PF08173 Membrane bound YbgT-like protein VCSRO96_1053 PF03061 Thioesterase superfamily VCSRO96_1054 PF01618 MotA/TolQ/ExbB proton channel family VCSRO96_1055 PF02472 Biopolymer transport protein ExbD/TolR VCSRO96_1057 PF04052 TolB amino-terminal domain VCSRO96_1057 PF07676 WD40-like Beta Propeller Repeat VCSRO96_1058 PF00691 OmpA family VCSRO96_1060 PF02445 Quinolinate synthetase A protein VCSRO96_1062 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1062 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1062 PF09308 LuxQ, periplasmic VCSRO96_1062 PF00072 Response regulator receiver domain VCSRO96_1063 PF06610 L-alanine exporter VCSRO96_1064 PF00171 Aldehyde dehydrogenase family VCSRO96_1065 PF02954 Bacterial regulatory protein, Fis family VCSRO96_1065 PF00158 Sigma-54 interaction domain VCSRO96_1065 PF01590 GAF domain VCSRO96_1066 PF09905 DNA-binding protein VF530 VCSRO96_1068 PF03441 FAD binding domain of DNA photolyase VCSRO96_1068 PF00875 DNA photolyase VCSRO96_1073 PF00873 AcrB/AcrD/AcrF family VCSRO96_1074 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO96_1076 PF02470 MlaD protein VCSRO96_1077 PF04403 Paraquat-inducible protein A VCSRO96_1078 PF08362 YcdC-like protein, C-terminal region VCSRO96_1078 PF00440 Bacterial regulatory proteins, tetR family VCSRO96_1079 PF00171 Aldehyde dehydrogenase family VCSRO96_1080 PF07383 Protein of unknown function (DUF1496) VCSRO96_1083 PF16295 Tetracyclin repressor-like, C-terminal domain VCSRO96_1083 PF00440 Bacterial regulatory proteins, tetR family VCSRO96_1084 PF09317 Domain of unknown function (DUF1974) VCSRO96_1084 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCSRO96_1084 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCSRO96_1084 PF02770 Acyl-CoA dehydrogenase, middle domain VCSRO96_1085 PF12241 Trans-2-enoyl-CoA reductase catalytic region VCSRO96_1085 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VCSRO96_1085 PF07055 Enoyl reductase FAD binding domain VCSRO96_1086 PF01176 Translation initiation factor 1A / IF-1 VCSRO96_1087 PF04376 Arginine-tRNA-protein transferase, N terminus VCSRO96_1087 PF04377 Arginine-tRNA-protein transferase, C terminus VCSRO96_1088 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VCSRO96_1089 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VCSRO96_1090 PF10692 Protein of unknown function (DUF2498) VCSRO96_1091 PF08272 Topoisomerase I zinc-ribbon-like VCSRO96_1091 PF01396 Topoisomerase DNA binding C4 zinc finger VCSRO96_1091 PF01751 Toprim domain VCSRO96_1091 PF01131 DNA topoisomerase VCSRO96_1092 PF00483 Nucleotidyl transferase VCSRO96_1093 PF08323 Starch synthase catalytic domain VCSRO96_1093 PF00534 Glycosyl transferases group 1 VCSRO96_1097 PF04994 TfoX C-terminal domain VCSRO96_1097 PF04993 TfoX N-terminal domain VCSRO96_1098 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_1099 PF02613 Nitrate reductase delta subunit VCSRO96_1100 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_1100 PF00072 Response regulator receiver domain VCSRO96_1101 PF02698 DUF218 domain VCSRO96_1102 PF13847 Methyltransferase domain VCSRO96_1103 PF03882 MukF winged-helix domain VCSRO96_1103 PF17193 MukF C-terminal domain VCSRO96_1103 PF17192 MukF middle domain VCSRO96_1104 PF04288 MukE-like family VCSRO96_1105 PF16330 MukB hinge domain VCSRO96_1105 PF04310 MukB N-terminal VCSRO96_1106 PF01037 Lrp/AsnC ligand binding domain VCSRO96_1107 PF01810 LysE type translocator VCSRO96_1108 PF11842 Domain of unknown function (DUF3362) VCSRO96_1108 PF04055 Radical SAM superfamily VCSRO96_1108 PF08497 Radical SAM N-terminal VCSRO96_1109 PF00563 EAL domain VCSRO96_1109 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1109 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_1110 PF00675 Insulinase (Peptidase family M16) VCSRO96_1110 PF05193 Peptidase M16 inactive domain VCSRO96_1113 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_1113 PF03466 LysR substrate binding domain VCSRO96_1114 PF08267 Cobalamin-independent synthase, N-terminal domain VCSRO96_1114 PF01717 Cobalamin-independent synthase, Catalytic domain VCSRO96_1116 PF03795 YCII-related domain VCSRO96_1117 PF03061 Thioesterase superfamily VCSRO96_1118 PF04279 Intracellular septation protein A VCSRO96_1120 PF02698 DUF218 domain VCSRO96_1121 PF01370 NAD dependent epimerase/dehydratase family VCSRO96_1123 PF01226 Formate/nitrite transporter VCSRO96_1124 PF06796 Periplasmic nitrate reductase protein NapE VCSRO96_1125 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO96_1126 PF00384 Molybdopterin oxidoreductase VCSRO96_1126 PF18364 Molybdopterin oxidoreductase N-terminal domain VCSRO96_1126 PF01568 Molydopterin dinucleotide binding domain VCSRO96_1129 PF01368 DHH family VCSRO96_1129 PF02833 DHHA2 domain VCSRO96_1132 PF00005 ABC transporter VCSRO96_1133 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_1133 PF00005 ABC transporter VCSRO96_1134 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1134 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO96_1135 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1136 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO96_1137 PF00158 Sigma-54 interaction domain VCSRO96_1137 PF02954 Bacterial regulatory protein, Fis family VCSRO96_1138 PF04012 PspA/IM30 family VCSRO96_1141 PF00529 HlyD membrane-fusion protein of T1SS VCSRO96_1141 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO96_1142 PF13533 Biotin-lipoyl like VCSRO96_1143 PF00873 AcrB/AcrD/AcrF family VCSRO96_1144 PF00873 AcrB/AcrD/AcrF family VCSRO96_1145 PF03352 Methyladenine glycosylase VCSRO96_1146 PF00582 Universal stress protein family VCSRO96_1147 PF00999 Sodium/hydrogen exchanger family VCSRO96_1147 PF02080 TrkA-C domain VCSRO96_1147 PF02254 TrkA-N domain VCSRO96_1148 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO96_1149 PF13091 PLD-like domain VCSRO96_1149 PF13396 Phospholipase_D-nuclease N-terminal VCSRO96_1150 PF00209 Sodium:neurotransmitter symporter family VCSRO96_1151 PF00849 RNA pseudouridylate synthase VCSRO96_1152 PF01066 CDP-alcohol phosphatidyltransferase VCSRO96_1153 PF00005 ABC transporter VCSRO96_1154 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1155 PF13416 Bacterial extracellular solute-binding protein VCSRO96_1157 PF06945 Protein of unknown function (DUF1289) VCSRO96_1160 PF00005 ABC transporter VCSRO96_1161 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO96_1162 PF03222 Tryptophan/tyrosine permease family VCSRO96_1165 PF03448 MgtE intracellular N domain VCSRO96_1165 PF00571 CBS domain VCSRO96_1165 PF01769 Divalent cation transporter VCSRO96_1166 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1166 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1166 PF09308 LuxQ, periplasmic VCSRO96_1166 PF00072 Response regulator receiver domain VCSRO96_1167 PF00563 EAL domain VCSRO96_1167 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1167 PF00498 FHA domain VCSRO96_1168 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_1168 PF00563 EAL domain VCSRO96_1168 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1170 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO96_1170 PF01752 Collagenase VCSRO96_1170 PF08453 Peptidase family M9 N-terminal VCSRO96_1172 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO96_1172 PF12793 Sugar transport-related sRNA regulator N-term VCSRO96_1176 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1176 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_1176 PF00672 HAMP domain VCSRO96_1178 PF01590 GAF domain VCSRO96_1178 PF00563 EAL domain VCSRO96_1178 PF00360 Phytochrome region VCSRO96_1178 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1179 PF01386 Ribosomal L25p family VCSRO96_1180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1181 PF00072 Response regulator receiver domain VCSRO96_1181 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_1183 PF00271 Helicase conserved C-terminal domain VCSRO96_1183 PF04851 Type III restriction enzyme, res subunit VCSRO96_1184 PF01479 S4 domain VCSRO96_1184 PF00849 RNA pseudouridylate synthase VCSRO96_1185 PF07690 Major Facilitator Superfamily VCSRO96_1187 PF13460 NAD(P)H-binding VCSRO96_1187 PF11066 Protein of unknown function (DUF2867) VCSRO96_1188 PF01554 MatE VCSRO96_1189 PF00005 ABC transporter VCSRO96_1190 PF02687 FtsX-like permease family VCSRO96_1190 PF12704 MacB-like periplasmic core domain VCSRO96_1192 PF06965 Na+/H+ antiporter 1 VCSRO96_1193 PF00202 Aminotransferase class-III VCSRO96_1194 PF03435 Saccharopine dehydrogenase NADP binding domain VCSRO96_1194 PF16653 Saccharopine dehydrogenase C-terminal domain VCSRO96_1196 PF00691 OmpA family VCSRO96_1196 PF05736 OprF membrane domain VCSRO96_1197 PF02321 Outer membrane efflux protein VCSRO96_1201 PF03466 LysR substrate binding domain VCSRO96_1201 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_1203 PF01863 Protein of unknown function DUF45 VCSRO96_1204 PF05971 RNA methyltransferase VCSRO96_1207 PF04204 Homoserine O-succinyltransferase VCSRO96_1211 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO96_1214 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VCSRO96_1214 PF17203 Single cache domain 3 VCSRO96_1214 PF00989 PAS fold VCSRO96_1214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1215 PF00072 Response regulator receiver domain VCSRO96_1215 PF12431 Transcriptional regulator VCSRO96_1217 PF00072 Response regulator receiver domain VCSRO96_1217 PF01584 CheW-like domain VCSRO96_1220 PF00072 Response regulator receiver domain VCSRO96_1220 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1224 PF07690 Major Facilitator Superfamily VCSRO96_1225 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VCSRO96_1225 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VCSRO96_1226 PF10509 Galactokinase galactose-binding signature VCSRO96_1226 PF08544 GHMP kinases C terminal VCSRO96_1226 PF00288 GHMP kinases N terminal domain VCSRO96_1227 PF01263 Aldose 1-epimerase VCSRO96_1228 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1230 PF00205 Thiamine pyrophosphate enzyme, central domain VCSRO96_1230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCSRO96_1230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO96_1231 PF03306 Alpha-acetolactate decarboxylase VCSRO96_1232 PF03466 LysR substrate binding domain VCSRO96_1232 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_1233 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) VCSRO96_1234 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCSRO96_1234 PF00361 Proton-conducting membrane transporter VCSRO96_1235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_1235 PF03466 LysR substrate binding domain VCSRO96_1236 PF00501 AMP-binding enzyme VCSRO96_1236 PF13193 AMP-binding enzyme C-terminal domain VCSRO96_1239 PF04266 ASCH domain VCSRO96_1242 PF10415 Fumarase C C-terminus VCSRO96_1242 PF00206 Lyase VCSRO96_1244 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO96_1245 PF02322 Cytochrome bd terminal oxidase subunit II VCSRO96_1246 PF00005 ABC transporter VCSRO96_1246 PF02687 FtsX-like permease family VCSRO96_1246 PF12704 MacB-like periplasmic core domain VCSRO96_1247 PF02687 FtsX-like permease family VCSRO96_1247 PF00005 ABC transporter VCSRO96_1247 PF12704 MacB-like periplasmic core domain VCSRO96_1248 PF00005 ABC transporter VCSRO96_1248 PF02687 FtsX-like permease family VCSRO96_1248 PF12704 MacB-like periplasmic core domain VCSRO96_1250 PF00529 HlyD membrane-fusion protein of T1SS VCSRO96_1252 PF00141 Peroxidase VCSRO96_1253 PF00232 Glycosyl hydrolase family 1 VCSRO96_1254 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_1255 PF01042 Endoribonuclease L-PSP VCSRO96_1256 PF04074 YhcH/YjgK/YiaL VCSRO96_1257 PF03009 Glycerophosphoryl diester phosphodiesterase family VCSRO96_1258 PF08220 DeoR-like helix-turn-helix domain VCSRO96_1258 PF00455 DeoR C terminal sensor domain VCSRO96_1259 PF17912 MalK OB fold domain VCSRO96_1259 PF00005 ABC transporter VCSRO96_1260 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1261 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1262 PF13416 Bacterial extracellular solute-binding protein VCSRO96_1264 PF01618 MotA/TolQ/ExbB proton channel family VCSRO96_1265 PF01618 MotA/TolQ/ExbB proton channel family VCSRO96_1266 PF02472 Biopolymer transport protein ExbD/TolR VCSRO96_1267 PF03544 Gram-negative bacterial TonB protein C-terminal VCSRO96_1269 PF14743 DNA ligase OB-like domain VCSRO96_1269 PF01068 ATP dependent DNA ligase domain VCSRO96_1271 PF01554 MatE VCSRO96_1273 PF03881 Fructosamine kinase VCSRO96_1275 PF00877 NlpC/P60 family VCSRO96_1276 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_1276 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1276 PF00672 HAMP domain VCSRO96_1278 PF03942 DTW domain VCSRO96_1279 PF00480 ROK family VCSRO96_1281 PF00994 Probable molybdopterin binding domain VCSRO96_1281 PF03454 MoeA C-terminal region (domain IV) VCSRO96_1281 PF03453 MoeA N-terminal region (domain I and II) VCSRO96_1282 PF12804 MobA-like NTP transferase domain VCSRO96_1283 PF00005 ABC transporter VCSRO96_1283 PF08402 TOBE domain VCSRO96_1284 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1285 PF12849 PBP superfamily domain VCSRO96_1286 PF00158 Sigma-54 interaction domain VCSRO96_1286 PF00072 Response regulator receiver domain VCSRO96_1286 PF02954 Bacterial regulatory protein, Fis family VCSRO96_1287 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1287 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1287 PF00989 PAS fold VCSRO96_1288 PF00005 ABC transporter VCSRO96_1288 PF12848 ABC transporter VCSRO96_1289 PF02634 FdhD/NarQ family VCSRO96_1293 PF02613 Nitrate reductase delta subunit VCSRO96_1295 PF12838 4Fe-4S dicluster domain VCSRO96_1295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCSRO96_1295 PF00384 Molybdopterin oxidoreductase VCSRO96_1295 PF01568 Molydopterin dinucleotide binding domain VCSRO96_1295 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VCSRO96_1295 PF12838 4Fe-4S dicluster domain VCSRO96_1295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCSRO96_1295 PF00384 Molybdopterin oxidoreductase VCSRO96_1295 PF01568 Molydopterin dinucleotide binding domain VCSRO96_1295 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VCSRO96_1296 PF13247 4Fe-4S dicluster domain VCSRO96_1297 PF13247 4Fe-4S dicluster domain VCSRO96_1300 PF02146 Sir2 family VCSRO96_1301 PF04461 Protein of unknown function (DUF520) VCSRO96_1302 PF00793 DAHP synthetase I family VCSRO96_1305 PF17783 CvfB-like winged helix domain VCSRO96_1305 PF13509 S1 domain VCSRO96_1306 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VCSRO96_1306 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VCSRO96_1306 PF01189 16S rRNA methyltransferase RsmB/F VCSRO96_1307 PF02470 MlaD protein VCSRO96_1308 PF04403 Paraquat-inducible protein A VCSRO96_1309 PF00664 ABC transporter transmembrane region VCSRO96_1309 PF00005 ABC transporter VCSRO96_1310 PF13185 GAF domain VCSRO96_1311 PF04352 ProQ/FINO family VCSRO96_1311 PF17516 ProQ C-terminal domain VCSRO96_1312 PF11818 C-terminal domain of tail specific protease (DUF3340) VCSRO96_1312 PF00595 PDZ domain VCSRO96_1312 PF17804 Tail specific protease N-terminal domain VCSRO96_1312 PF03572 Peptidase family S41 VCSRO96_1313 PF01797 Transposase IS200 like VCSRO96_1315 PF11940 Domain of unknown function (DUF3458) Ig-like fold VCSRO96_1315 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VCSRO96_1315 PF01433 Peptidase family M1 domain VCSRO96_1316 PF05088 Bacterial NAD-glutamate dehydrogenase VCSRO96_1317 PF01180 Dihydroorotate dehydrogenase VCSRO96_1318 PF07126 Cell-division protein ZapC VCSRO96_1319 PF01170 Putative RNA methylase family UPF0020 VCSRO96_1319 PF02926 THUMP domain VCSRO96_1319 PF10672 S-adenosylmethionine-dependent methyltransferase VCSRO96_1321 PF00005 ABC transporter VCSRO96_1321 PF16326 ABC transporter C-terminal domain VCSRO96_1321 PF12848 ABC transporter VCSRO96_1323 PF04957 Ribosome modulation factor VCSRO96_1324 PF07977 FabA-like domain VCSRO96_1325 PF13654 AAA domain VCSRO96_1325 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO96_1326 PF06303 MatP N-terminal domain VCSRO96_1326 PF17414 MatP C-terminal ribbon-helix-helix domain VCSRO96_1353 PF07634 RtxA repeat VCSRO96_1353 PF16671 Actin cross-linking domain VCSRO96_1353 PF12146 Serine aminopeptidase, S33 VCSRO96_1353 PF11647 Membrane Localization Domain VCSRO96_1353 PF11713 Peptidase C80 family VCSRO96_1354 PF02794 RTX toxin acyltransferase family VCSRO96_1356 PF03412 Peptidase C39 family VCSRO96_1356 PF00005 ABC transporter VCSRO96_1356 PF00664 ABC transporter transmembrane region VCSRO96_1358 PF00664 ABC transporter transmembrane region VCSRO96_1358 PF03412 Peptidase C39 family VCSRO96_1358 PF00005 ABC transporter VCSRO96_1359 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1359 PF09308 LuxQ, periplasmic VCSRO96_1359 PF00072 Response regulator receiver domain VCSRO96_1359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1362 PF00115 Cytochrome C and Quinol oxidase polypeptide I VCSRO96_1365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCSRO96_1365 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VCSRO96_1367 PF00403 Heavy-metal-associated domain VCSRO96_1370 PF00027 Cyclic nucleotide-binding domain VCSRO96_1370 PF13545 Crp-like helix-turn-helix domain VCSRO96_1371 PF00582 Universal stress protein family VCSRO96_1372 PF01171 PP-loop family VCSRO96_1376 PF00005 ABC transporter VCSRO96_1376 PF08402 TOBE domain VCSRO96_1377 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1378 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1379 PF13416 Bacterial extracellular solute-binding protein VCSRO96_1380 PF01609 Transposase DDE domain VCSRO96_1380 PF13006 Insertion element 4 transposase N-terminal VCSRO96_1381 PF13416 Bacterial extracellular solute-binding protein VCSRO96_1384 PF01235 Sodium:alanine symporter family VCSRO96_1385 PF01810 LysE type translocator VCSRO96_1389 PF16671 Actin cross-linking domain VCSRO96_1389 PF04717 Type VI secretion system, phage-baseplate injector VCSRO96_1390 PF05638 Type VI secretion system effector, Hcp VCSRO96_1391 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VCSRO96_1392 PF02743 Cache domain VCSRO96_1392 PF00672 HAMP domain VCSRO96_1392 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1393 PF07690 Major Facilitator Superfamily VCSRO96_1394 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO96_1394 PF00529 HlyD membrane-fusion protein of T1SS VCSRO96_1395 PF02321 Outer membrane efflux protein VCSRO96_1397 PF00270 DEAD/DEAH box helicase VCSRO96_1397 PF00271 Helicase conserved C-terminal domain VCSRO96_1398 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1398 PF13426 PAS domain VCSRO96_1398 PF08447 PAS fold VCSRO96_1399 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1399 PF00672 HAMP domain VCSRO96_1399 PF02743 Cache domain VCSRO96_1400 PF00893 Small Multidrug Resistance protein VCSRO96_1401 PF03441 FAD binding domain of DNA photolyase VCSRO96_1401 PF00875 DNA photolyase VCSRO96_1402 PF07690 Major Facilitator Superfamily VCSRO96_1403 PF03466 LysR substrate binding domain VCSRO96_1403 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_1404 PF10437 Bacterial lipoate protein ligase C-terminus VCSRO96_1404 PF03099 Biotin/lipoate A/B protein ligase family VCSRO96_1405 PF00012 Hsp70 protein VCSRO96_1407 PF00270 DEAD/DEAH box helicase VCSRO96_1407 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VCSRO96_1407 PF11898 Domain of unknown function (DUF3418) VCSRO96_1407 PF04408 Helicase associated domain (HA2) VCSRO96_1407 PF00271 Helicase conserved C-terminal domain VCSRO96_1412 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_1412 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1412 PF00563 EAL domain VCSRO96_1414 PF00012 Hsp70 protein VCSRO96_1415 PF00012 Hsp70 protein VCSRO96_1416 PF17158 Membrane-associated sensor, integral membrane domain VCSRO96_1416 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1418 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1418 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_1418 PF00563 EAL domain VCSRO96_1422 PF06508 Queuosine biosynthesis protein QueC VCSRO96_1423 PF04055 Radical SAM superfamily VCSRO96_1426 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO96_1426 PF14824 Sirohaem biosynthesis protein central VCSRO96_1426 PF10414 Sirohaem synthase dimerisation region VCSRO96_1427 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_1428 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1429 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1430 PF00005 ABC transporter VCSRO96_1431 PF01027 Inhibitor of apoptosis-promoting Bax1 VCSRO96_1432 PF04358 DsrC like protein VCSRO96_1433 PF00708 Acylphosphatase VCSRO96_1434 PF17785 PUA-like domain VCSRO96_1434 PF10672 S-adenosylmethionine-dependent methyltransferase VCSRO96_1435 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1436 PF00462 Glutaredoxin VCSRO96_1436 PF08534 Redoxin VCSRO96_1437 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1437 PF01627 Hpt domain VCSRO96_1437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1437 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VCSRO96_1437 PF00072 Response regulator receiver domain VCSRO96_1437 PF00672 HAMP domain VCSRO96_1438 PF00072 Response regulator receiver domain VCSRO96_1439 PF02798 Glutathione S-transferase, N-terminal domain VCSRO96_1439 PF14497 Glutathione S-transferase, C-terminal domain VCSRO96_1441 PF04209 homogentisate 1,2-dioxygenase VCSRO96_1442 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO96_1443 PF07687 Peptidase dimerisation domain VCSRO96_1443 PF01546 Peptidase family M20/M25/M40 VCSRO96_1446 PF16177 Acetyl-coenzyme A synthetase N-terminus VCSRO96_1446 PF13193 AMP-binding enzyme C-terminal domain VCSRO96_1446 PF00501 AMP-binding enzyme VCSRO96_1447 PF04303 PrpF protein VCSRO96_1448 PF00330 Aconitase family (aconitate hydratase) VCSRO96_1448 PF00694 Aconitase C-terminal domain VCSRO96_1449 PF00285 Citrate synthase, C-terminal domain VCSRO96_1451 PF00392 Bacterial regulatory proteins, gntR family VCSRO96_1451 PF07729 FCD domain VCSRO96_1454 PF01970 Tripartite tricarboxylate transporter TctA family VCSRO96_1457 PF02653 Branched-chain amino acid transport system / permease component VCSRO96_1458 PF00005 ABC transporter VCSRO96_1459 PF13407 Periplasmic binding protein domain VCSRO96_1463 PF00072 Response regulator receiver domain VCSRO96_1463 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_1464 PF00672 HAMP domain VCSRO96_1464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1464 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1465 PF06629 MltA-interacting protein MipA VCSRO96_1466 PF04393 Protein of unknown function (DUF535) VCSRO96_1467 PF00072 Response regulator receiver domain VCSRO96_1467 PF02954 Bacterial regulatory protein, Fis family VCSRO96_1467 PF00158 Sigma-54 interaction domain VCSRO96_1468 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_1468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1468 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1469 PF00939 Sodium:sulfate symporter transmembrane region VCSRO96_1470 PF00672 HAMP domain VCSRO96_1470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1471 PF00842 Alanine racemase, C-terminal domain VCSRO96_1471 PF01168 Alanine racemase, N-terminal domain VCSRO96_1472 PF00892 EamA-like transporter family VCSRO96_1474 PF13302 Acetyltransferase (GNAT) domain VCSRO96_1475 PF18024 Helix-turn-helix domain VCSRO96_1475 PF00158 Sigma-54 interaction domain VCSRO96_1476 PF05128 Domain of unknown function (DUF697) VCSRO96_1477 PF04317 YcjX-like family, DUF463 VCSRO96_1480 PF04715 Anthranilate synthase component I, N terminal region VCSRO96_1480 PF00425 chorismate binding enzyme VCSRO96_1481 PF00293 NUDIX domain VCSRO96_1482 PF03222 Tryptophan/tyrosine permease family VCSRO96_1483 PF03313 Serine dehydratase alpha chain VCSRO96_1483 PF03315 Serine dehydratase beta chain VCSRO96_1484 PF13006 Insertion element 4 transposase N-terminal VCSRO96_1484 PF01609 Transposase DDE domain VCSRO96_1485 PF01242 6-pyruvoyl tetrahydropterin synthase VCSRO96_1487 PF13276 HTH-like domain VCSRO96_1487 PF13333 Integrase core domain VCSRO96_1487 PF00665 Integrase core domain VCSRO96_1488 PF01242 6-pyruvoyl tetrahydropterin synthase VCSRO96_1489 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_1489 PF00672 HAMP domain VCSRO96_1489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1490 PF00152 tRNA synthetases class II (D, K and N) VCSRO96_1490 PF01336 OB-fold nucleic acid binding domain VCSRO96_1491 PF08543 Phosphomethylpyrimidine kinase VCSRO96_1492 PF00672 HAMP domain VCSRO96_1492 PF01966 HD domain VCSRO96_1493 PF00155 Aminotransferase class I and II VCSRO96_1496 PF17200 Single Cache domain 2 VCSRO96_1496 PF00672 HAMP domain VCSRO96_1496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1497 PF04349 Periplasmic glucan biosynthesis protein, MdoG VCSRO96_1498 PF13506 Glycosyl transferase family 21 VCSRO96_1499 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_1500 PF04794 YdjC-like protein VCSRO96_1501 PF02056 Family 4 glycosyl hydrolase VCSRO96_1501 PF11975 Family 4 glycosyl hydrolase C-terminal domain VCSRO96_1502 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VCSRO96_1503 PF02378 Phosphotransferase system, EIIC VCSRO96_1504 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO96_1505 PF01522 Polysaccharide deacetylase VCSRO96_1506 PF02028 BCCT, betaine/carnitine/choline family transporter VCSRO96_1507 PF01047 MarR family VCSRO96_1508 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_1508 PF00072 Response regulator receiver domain VCSRO96_1509 PF07730 Histidine kinase VCSRO96_1509 PF17200 Single Cache domain 2 VCSRO96_1510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCSRO96_1512 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO96_1515 PF00753 Metallo-beta-lactamase superfamily VCSRO96_1516 PF05951 Bacterial protein of unknown function (DUF882) VCSRO96_1522 PF00925 GTP cyclohydrolase II VCSRO96_1524 PF07690 Major Facilitator Superfamily VCSRO96_1526 PF17773 UPF0176 acylphosphatase like domain VCSRO96_1526 PF00581 Rhodanese-like domain VCSRO96_1527 PF00521 DNA gyrase/topoisomerase IV, subunit A VCSRO96_1527 PF03989 DNA gyrase C-terminal domain, beta-propeller VCSRO96_1529 PF00317 Ribonucleotide reductase, all-alpha domain VCSRO96_1529 PF02867 Ribonucleotide reductase, barrel domain VCSRO96_1529 PF03477 ATP cone domain VCSRO96_1530 PF00268 Ribonucleotide reductase, small chain VCSRO96_1531 PF00175 Oxidoreductase NAD-binding domain VCSRO96_1531 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO96_1531 PF00970 Oxidoreductase FAD-binding domain VCSRO96_1533 PF00994 Probable molybdopterin binding domain VCSRO96_1536 PF17200 Single Cache domain 2 VCSRO96_1536 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_1536 PF00672 HAMP domain VCSRO96_1539 PF00005 ABC transporter VCSRO96_1540 PF01032 FecCD transport family VCSRO96_1541 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VCSRO96_1544 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VCSRO96_1545 PF02654 Cobalamin-5-phosphate synthase VCSRO96_1546 PF02277 Phosphoribosyltransferase VCSRO96_1547 PF01641 SelR domain VCSRO96_1548 PF00375 Sodium:dicarboxylate symporter family VCSRO96_1549 PF08411 Exonuclease C-terminal VCSRO96_1549 PF00929 Exonuclease VCSRO96_1550 PF03788 LrgA family VCSRO96_1551 PF04172 LrgB-like family VCSRO96_1552 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO96_1552 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO96_1554 PF02222 ATP-grasp domain VCSRO96_1555 PF05724 Thiopurine S-methyltransferase (TPMT) VCSRO96_1558 PF00216 Bacterial DNA-binding protein VCSRO96_1559 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VCSRO96_1559 PF01588 Putative tRNA binding domain VCSRO96_1559 PF03147 Ferredoxin-fold anticodon binding domain VCSRO96_1559 PF03483 B3/4 domain VCSRO96_1559 PF03484 tRNA synthetase B5 domain VCSRO96_1560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VCSRO96_1560 PF01409 tRNA synthetases class II core domain (F) VCSRO96_1562 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1562 PF00072 Response regulator receiver domain VCSRO96_1567 PF01066 CDP-alcohol phosphatidyltransferase VCSRO96_1568 PF01541 GIY-YIG catalytic domain VCSRO96_1568 PF02151 UvrB/uvrC motif VCSRO96_1568 PF08459 UvrC Helix-hairpin-helix N-terminal VCSRO96_1569 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_1569 PF00072 Response regulator receiver domain VCSRO96_1570 PF00136 DNA polymerase family B VCSRO96_1570 PF03104 DNA polymerase family B, exonuclease domain VCSRO96_1571 PF00563 EAL domain VCSRO96_1571 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1571 PF13426 PAS domain VCSRO96_1573 PF01132 Elongation factor P (EF-P) OB domain VCSRO96_1573 PF08207 Elongation factor P (EF-P) KOW-like domain VCSRO96_1573 PF09285 Elongation factor P, C-terminal VCSRO96_1574 PF04269 Protein of unknown function, DUF440 VCSRO96_1576 PF07702 UTRA domain VCSRO96_1576 PF00392 Bacterial regulatory proteins, gntR family VCSRO96_1577 PF01979 Amidohydrolase family VCSRO96_1578 PF00491 Arginase family VCSRO96_1579 PF01175 Urocanase Rossmann-like domain VCSRO96_1579 PF17392 Urocanase C-terminal domain VCSRO96_1579 PF17391 Urocanase N-terminal domain VCSRO96_1580 PF00221 Aromatic amino acid lyase VCSRO96_1582 PF00089 Trypsin VCSRO96_1584 PF04191 Phospholipid methyltransferase VCSRO96_1585 PF02913 FAD linked oxidases, C-terminal domain VCSRO96_1585 PF01565 FAD binding domain VCSRO96_1585 PF13183 4Fe-4S dicluster domain VCSRO96_1588 PF13488 Glycine zipper VCSRO96_1588 PF00691 OmpA family VCSRO96_1592 PF01259 SAICAR synthetase VCSRO96_1594 PF03949 Malic enzyme, NAD binding domain VCSRO96_1594 PF00390 Malic enzyme, N-terminal domain VCSRO96_1596 PF02698 DUF218 domain VCSRO96_1597 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1597 PF08448 PAS fold VCSRO96_1598 PF00266 Aminotransferase class-V VCSRO96_1600 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_1601 PF00664 ABC transporter transmembrane region VCSRO96_1601 PF00005 ABC transporter VCSRO96_1602 PF00664 ABC transporter transmembrane region VCSRO96_1602 PF00005 ABC transporter VCSRO96_1603 PF01479 S4 domain VCSRO96_1603 PF00849 RNA pseudouridylate synthase VCSRO96_1604 PF01300 Telomere recombination VCSRO96_1605 PF02811 PHP domain VCSRO96_1606 PF04715 Anthranilate synthase component I, N terminal region VCSRO96_1606 PF00425 chorismate binding enzyme VCSRO96_1607 PF00117 Glutamine amidotransferase class-I VCSRO96_1608 PF02885 Glycosyl transferase family, helical bundle domain VCSRO96_1608 PF00591 Glycosyl transferase family, a/b domain VCSRO96_1609 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VCSRO96_1609 PF00218 Indole-3-glycerol phosphate synthase VCSRO96_1610 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO96_1611 PF00290 Tryptophan synthase alpha chain VCSRO96_1612 PF00375 Sodium:dicarboxylate symporter family VCSRO96_1613 PF00265 Thymidine kinase VCSRO96_1614 PF02938 GAD domain VCSRO96_1614 PF00152 tRNA synthetases class II (D, K and N) VCSRO96_1614 PF01336 OB-fold nucleic acid binding domain VCSRO96_1615 PF01904 Protein of unknown function DUF72 VCSRO96_1616 PF13649 Methyltransferase domain VCSRO96_1617 PF08003 Protein of unknown function (DUF1698) VCSRO96_1618 PF18030 RimK PreATP-grasp domain VCSRO96_1618 PF08443 RimK-like ATP-grasp domain VCSRO96_1621 PF00266 Aminotransferase class-V VCSRO96_1623 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1623 PF00989 PAS fold VCSRO96_1626 PF04994 TfoX C-terminal domain VCSRO96_1626 PF04993 TfoX N-terminal domain VCSRO96_1628 PF03956 Lysine exporter LysO VCSRO96_1630 PF00282 Pyridoxal-dependent decarboxylase conserved domain VCSRO96_1631 PF01380 SIS domain VCSRO96_1631 PF01418 Helix-turn-helix domain, rpiR family VCSRO96_1632 PF00465 Iron-containing alcohol dehydrogenase VCSRO96_1632 PF00171 Aldehyde dehydrogenase family VCSRO96_1633 PF00462 Glutaredoxin VCSRO96_1634 PF01609 Transposase DDE domain VCSRO96_1634 PF13006 Insertion element 4 transposase N-terminal VCSRO96_1635 PF02080 TrkA-C domain VCSRO96_1635 PF06826 Predicted Permease Membrane Region VCSRO96_1636 PF02861 Clp amino terminal domain, pathogenicity island component VCSRO96_1636 PF17871 AAA lid domain VCSRO96_1636 PF07724 AAA domain (Cdc48 subfamily) VCSRO96_1636 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO96_1636 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO96_1637 PF02617 ATP-dependent Clp protease adaptor protein ClpS VCSRO96_1638 PF00313 'Cold-shock' DNA-binding domain VCSRO96_1639 PF03971 Monomeric isocitrate dehydrogenase VCSRO96_1640 PF00849 RNA pseudouridylate synthase VCSRO96_1641 PF01502 Phosphoribosyl-AMP cyclohydrolase VCSRO96_1641 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VCSRO96_1642 PF00977 Histidine biosynthesis protein VCSRO96_1643 PF00977 Histidine biosynthesis protein VCSRO96_1644 PF00117 Glutamine amidotransferase class-I VCSRO96_1645 PF00475 Imidazoleglycerol-phosphate dehydratase VCSRO96_1645 PF08645 Polynucleotide kinase 3 phosphatase VCSRO96_1646 PF00155 Aminotransferase class I and II VCSRO96_1647 PF00815 Histidinol dehydrogenase VCSRO96_1648 PF08029 HisG, C-terminal domain VCSRO96_1648 PF01634 ATP phosphoribosyltransferase VCSRO96_1649 PF03553 Na+/H+ antiporter family VCSRO96_1650 PF00816 H-NS histone family VCSRO96_1651 PF00294 pfkB family carbohydrate kinase VCSRO96_1653 PF04356 Protein of unknown function (DUF489) VCSRO96_1654 PF08328 Adenylosuccinate lyase C-terminal VCSRO96_1654 PF00206 Lyase VCSRO96_1656 PF16036 Chalcone isomerase-like VCSRO96_1661 PF00106 short chain dehydrogenase VCSRO96_1663 PF01435 Peptidase family M48 VCSRO96_1666 PF08241 Methyltransferase domain VCSRO96_1667 PF00155 Aminotransferase class I and II VCSRO96_1668 PF06968 Biotin and Thiamin Synthesis associated domain VCSRO96_1668 PF04055 Radical SAM superfamily VCSRO96_1669 PF00202 Aminotransferase class-III VCSRO96_1670 PF13276 HTH-like domain VCSRO96_1670 PF00665 Integrase core domain VCSRO96_1670 PF13333 Integrase core domain VCSRO96_1672 PF01797 Transposase IS200 like VCSRO96_1673 PF02403 Seryl-tRNA synthetase N-terminal domain VCSRO96_1673 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO96_1674 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO96_1674 PF16193 AAA C-terminal domain VCSRO96_1674 PF12002 MgsA AAA+ ATPase C terminal VCSRO96_1675 PF03548 Outer membrane lipoprotein carrier protein LolA VCSRO96_1676 PF07516 SecA Wing and Scaffold domain VCSRO96_1676 PF07517 SecA DEAD-like domain VCSRO96_1676 PF01043 SecA preprotein cross-linking domain VCSRO96_1676 PF02810 SEC-C motif VCSRO96_1677 PF01207 Dihydrouridine synthase (Dus) VCSRO96_1678 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1679 PF00005 ABC transporter VCSRO96_1680 PF02653 Branched-chain amino acid transport system / permease component VCSRO96_1683 PF09905 DNA-binding protein VF530 VCSRO96_1684 PF04217 Protein of unknown function, DUF412 VCSRO96_1685 PF00871 Acetokinase family VCSRO96_1686 PF07085 DRTGG domain VCSRO96_1686 PF01515 Phosphate acetyl/butaryl transferase VCSRO96_1687 PF13409 Glutathione S-transferase, N-terminal domain VCSRO96_1688 PF00005 ABC transporter VCSRO96_1688 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_1689 PF00005 ABC transporter VCSRO96_1689 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_1690 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1690 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO96_1691 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1692 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO96_1694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1694 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1694 PF08448 PAS fold VCSRO96_1694 PF13188 PAS domain VCSRO96_1694 PF00072 Response regulator receiver domain VCSRO96_1695 PF02954 Bacterial regulatory protein, Fis family VCSRO96_1695 PF00072 Response regulator receiver domain VCSRO96_1695 PF00158 Sigma-54 interaction domain VCSRO96_1696 PF00563 EAL domain VCSRO96_1696 PF13188 PAS domain VCSRO96_1696 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1696 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_1697 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1697 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1698 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1698 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_1698 PF00989 PAS fold VCSRO96_1698 PF13188 PAS domain VCSRO96_1698 PF13426 PAS domain VCSRO96_1700 PF00072 Response regulator receiver domain VCSRO96_1703 PF01300 Telomere recombination VCSRO96_1703 PF03481 Putative GTP-binding controlling metal-binding VCSRO96_1706 PF01161 Phosphatidylethanolamine-binding protein VCSRO96_1708 PF00704 Glycosyl hydrolases family 18 VCSRO96_1708 PF06483 Chitinase C VCSRO96_1711 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO96_1711 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO96_1712 PF01022 Bacterial regulatory protein, arsR family VCSRO96_1713 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1713 PF08448 PAS fold VCSRO96_1717 PF13404 AsnC-type helix-turn-helix domain VCSRO96_1717 PF01037 Lrp/AsnC ligand binding domain VCSRO96_1718 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO96_1719 PF01343 Peptidase family S49 VCSRO96_1719 PF08496 Peptidase family S49 N-terminal VCSRO96_1720 PF00106 short chain dehydrogenase VCSRO96_1722 PF03692 Putative zinc- or iron-chelating domain VCSRO96_1723 PF03692 Putative zinc- or iron-chelating domain VCSRO96_1724 PF02132 RecR protein VCSRO96_1724 PF13662 Toprim domain VCSRO96_1725 PF02575 YbaB/EbfC DNA-binding family VCSRO96_1726 PF12169 DNA polymerase III subunits gamma and tau domain III VCSRO96_1726 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VCSRO96_1726 PF12170 DNA polymerase III tau subunit V interacting with alpha VCSRO96_1727 PF00156 Phosphoribosyl transferase domain VCSRO96_1728 PF04304 Protein of unknown function (DUF454) VCSRO96_1730 PF00072 Response regulator receiver domain VCSRO96_1731 PF03466 LysR substrate binding domain VCSRO96_1731 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_1732 PF00881 Nitroreductase family VCSRO96_1733 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VCSRO96_1733 PF00378 Enoyl-CoA hydratase/isomerase VCSRO96_1733 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VCSRO96_1734 PF00108 Thiolase, N-terminal domain VCSRO96_1734 PF02803 Thiolase, C-terminal domain VCSRO96_1735 PF08281 Sigma-70, region 4 VCSRO96_1735 PF04542 Sigma-70 region 2 VCSRO96_1737 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO96_1738 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO96_1739 PF01451 Low molecular weight phosphotyrosine protein phosphatase VCSRO96_1740 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VCSRO96_1740 PF12557 Cob(I)alamin adenosyltransferase N terminal VCSRO96_1741 PF05170 AsmA family VCSRO96_1742 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO96_1743 PF10609 NUBPL iron-transfer P-loop NTPase VCSRO96_1744 PF09334 tRNA synthetases class I (M) VCSRO96_1744 PF01588 Putative tRNA binding domain VCSRO96_1746 PF01048 Phosphorylase superfamily VCSRO96_1747 PF00403 Heavy-metal-associated domain VCSRO96_1748 PF00571 CBS domain VCSRO96_1748 PF01743 Poly A polymerase head domain VCSRO96_1749 PF07694 5TMR of 5TMR-LYT VCSRO96_1749 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1750 PF02391 MoaE protein VCSRO96_1751 PF02597 ThiS family VCSRO96_1752 PF01967 MoaC family VCSRO96_1753 PF00994 Probable molybdopterin binding domain VCSRO96_1754 PF06463 Molybdenum Cofactor Synthesis C VCSRO96_1754 PF04055 Radical SAM superfamily VCSRO96_1755 PF01933 Uncharacterised protein family UPF0052 VCSRO96_1756 PF01627 Hpt domain VCSRO96_1757 PF00158 Sigma-54 interaction domain VCSRO96_1757 PF02954 Bacterial regulatory protein, Fis family VCSRO96_1757 PF00072 Response regulator receiver domain VCSRO96_1758 PF02151 UvrB/uvrC motif VCSRO96_1758 PF17757 UvrB interaction domain VCSRO96_1758 PF12344 Ultra-violet resistance protein B VCSRO96_1758 PF04851 Type III restriction enzyme, res subunit VCSRO96_1758 PF00271 Helicase conserved C-terminal domain VCSRO96_1760 PF02508 Rnf-Nqr subunit, membrane protein VCSRO96_1761 PF04060 Putative Fe-S cluster VCSRO96_1762 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VCSRO96_1762 PF12838 4Fe-4S dicluster domain VCSRO96_1762 PF13375 RnfC Barrel sandwich hybrid domain VCSRO96_1762 PF10531 SLBB domain VCSRO96_1763 PF03116 NQR2, RnfD, RnfE family VCSRO96_1764 PF04205 FMN-binding domain VCSRO96_1765 PF02508 Rnf-Nqr subunit, membrane protein VCSRO96_1766 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO96_1766 PF00633 Helix-hairpin-helix motif VCSRO96_1766 PF10576 Iron-sulfur binding domain of endonuclease III VCSRO96_1767 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO96_1768 PF10952 Protein of unknown function (DUF2753) VCSRO96_1769 PF18393 MotY N-terminal domain VCSRO96_1769 PF00691 OmpA family VCSRO96_1770 PF00929 Exonuclease VCSRO96_1771 PF03553 Na+/H+ antiporter family VCSRO96_1771 PF13726 Na+-H+ antiporter family VCSRO96_1772 PF00156 Phosphoribosyl transferase domain VCSRO96_1773 PF02674 Colicin V production protein VCSRO96_1774 PF05036 Sporulation related domain VCSRO96_1775 PF08245 Mur ligase middle domain VCSRO96_1775 PF02875 Mur ligase family, glutamate ligase domain VCSRO96_1776 PF01039 Carboxyl transferase domain VCSRO96_1776 PF17848 Acetyl-coA carboxylase zinc finger domain VCSRO96_1777 PF01416 tRNA pseudouridine synthase VCSRO96_1779 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO96_1779 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VCSRO96_1780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCSRO96_1780 PF00367 phosphotransferase system, EIIB VCSRO96_1780 PF02378 Phosphotransferase system, EIIC VCSRO96_1781 PF01979 Amidohydrolase family VCSRO96_1782 PF01047 MarR family VCSRO96_1782 PF00480 ROK family VCSRO96_1783 PF02254 TrkA-N domain VCSRO96_1783 PF00999 Sodium/hydrogen exchanger family VCSRO96_1784 PF00733 Asparagine synthase VCSRO96_1784 PF13537 Glutamine amidotransferase domain VCSRO96_1785 PF02357 Transcription termination factor nusG VCSRO96_1786 PF00854 POT family VCSRO96_1787 PF00762 Ferrochelatase VCSRO96_1788 PF05191 Adenylate kinase, active site lid VCSRO96_1789 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1789 PF00183 Hsp90 protein VCSRO96_1790 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_1791 PF17323 Trans-membrane regulatory protein ToxS VCSRO96_1793 PF12850 Calcineurin-like phosphoesterase superfamily domain VCSRO96_1794 PF01370 NAD dependent epimerase/dehydratase family VCSRO96_1794 PF08338 Domain of unknown function (DUF1731) VCSRO96_1795 PF00106 short chain dehydrogenase VCSRO96_1796 PF00085 Thioredoxin VCSRO96_1798 PF01145 SPFH domain / Band 7 family VCSRO96_1798 PF16200 C-terminal region of band_7 VCSRO96_1799 PF01957 NfeD-like C-terminal, partner-binding VCSRO96_1800 PF13411 MerR HTH family regulatory protein VCSRO96_1801 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO96_1803 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VCSRO96_1803 PF12826 Helix-hairpin-helix motif VCSRO96_1803 PF03120 NAD-dependent DNA ligase OB-fold domain VCSRO96_1803 PF00533 BRCA1 C Terminus (BRCT) domain VCSRO96_1803 PF01653 NAD-dependent DNA ligase adenylation domain VCSRO96_1804 PF04354 ZipA, C-terminal FtsZ-binding domain VCSRO96_1806 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO96_1807 PF00381 PTS HPr component phosphorylation site VCSRO96_1808 PF05524 PEP-utilising enzyme, N-terminal VCSRO96_1808 PF00391 PEP-utilising enzyme, mobile domain VCSRO96_1808 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO96_1809 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCSRO96_1810 PF01494 FAD binding domain VCSRO96_1811 PF04055 Radical SAM superfamily VCSRO96_1811 PF00919 Uncharacterized protein family UPF0004 VCSRO96_1811 PF01938 TRAM domain VCSRO96_1812 PF02562 PhoH-like protein VCSRO96_1813 PF02130 Uncharacterized protein family UPF0054 VCSRO96_1814 PF00571 CBS domain VCSRO96_1814 PF03471 Transporter associated domain VCSRO96_1815 PF00795 Carbon-nitrogen hydrolase VCSRO96_1816 PF07295 Zinc-ribbon containing domain VCSRO96_1817 PF08264 Anticodon-binding domain of tRNA VCSRO96_1817 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO96_1817 PF13603 Leucyl-tRNA synthetase, Domain 2 VCSRO96_1818 PF04390 Lipopolysaccharide-assembly VCSRO96_1819 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VCSRO96_1819 PF06144 DNA polymerase III, delta subunit VCSRO96_1821 PF02590 Predicted SPOUT methyltransferase VCSRO96_1822 PF03717 Penicillin-binding Protein dimerisation domain VCSRO96_1822 PF00905 Penicillin binding protein transpeptidase domain VCSRO96_1823 PF01098 Cell cycle protein VCSRO96_1824 PF03330 Lytic transglycolase VCSRO96_1824 PF05036 Sporulation related domain VCSRO96_1825 PF07943 Penicillin-binding protein 5, C-terminal domain VCSRO96_1825 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO96_1826 PF04359 Protein of unknown function (DUF493) VCSRO96_1827 PF03099 Biotin/lipoate A/B protein ligase family VCSRO96_1828 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VCSRO96_1828 PF04055 Radical SAM superfamily VCSRO96_1830 PF00464 Serine hydroxymethyltransferase VCSRO96_1834 PF13614 AAA domain VCSRO96_1834 PF13807 G-rich domain on putative tyrosine kinase VCSRO96_1834 PF02706 Chain length determinant protein VCSRO96_1835 PF02563 Polysaccharide biosynthesis/export protein VCSRO96_1835 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VCSRO96_1835 PF10531 SLBB domain VCSRO96_1837 PF02397 Bacterial sugar transferase VCSRO96_1840 PF13006 Insertion element 4 transposase N-terminal VCSRO96_1840 PF01609 Transposase DDE domain VCSRO96_1842 PF17945 Beta/Gamma crystallin VCSRO96_1842 PF12561 ToxR activated gene A lipoprotein domain VCSRO96_1845 PF03808 Glycosyl transferase WecB/TagA/CpsF family VCSRO96_1847 PF00534 Glycosyl transferases group 1 VCSRO96_1847 PF00862 Sucrose synthase VCSRO96_1849 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_1854 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VCSRO96_1854 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VCSRO96_1854 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VCSRO96_1855 PF02350 UDP-N-acetylglucosamine 2-epimerase VCSRO96_1857 PF01451 Low molecular weight phosphotyrosine protein phosphatase VCSRO96_1858 PF00873 AcrB/AcrD/AcrF family VCSRO96_1859 PF13533 Biotin-lipoyl like VCSRO96_1864 PF00128 Alpha amylase, catalytic domain VCSRO96_1864 PF16657 Maltogenic Amylase, C-terminal domain VCSRO96_1865 PF00367 phosphotransferase system, EIIB VCSRO96_1865 PF02378 Phosphotransferase system, EIIC VCSRO96_1866 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_1868 PF09383 NIL domain VCSRO96_1868 PF00005 ABC transporter VCSRO96_1869 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_1870 PF03180 NLPA lipoprotein VCSRO96_1871 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VCSRO96_1872 PF07348 Syd protein (SUKH-2) VCSRO96_1873 PF14489 QueF-like protein VCSRO96_1873 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VCSRO96_1875 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_1876 PF11892 Domain of unknown function (DUF3412) VCSRO96_1876 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VCSRO96_1876 PF03641 Possible lysine decarboxylase VCSRO96_1877 PF01367 5'-3' exonuclease, C-terminal SAM fold VCSRO96_1877 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VCSRO96_1878 PF04241 Protein of unknown function (DUF423) VCSRO96_1879 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_1879 PF03466 LysR substrate binding domain VCSRO96_1880 PF02568 Thiamine biosynthesis protein (ThiI) VCSRO96_1880 PF02926 THUMP domain VCSRO96_1881 PF13677 Membrane MotB of proton-channel complex MotA/MotB VCSRO96_1881 PF00691 OmpA family VCSRO96_1882 PF01618 MotA/TolQ/ExbB proton channel family VCSRO96_1883 PF02609 Exonuclease VII small subunit VCSRO96_1884 PF00348 Polyprenyl synthetase VCSRO96_1885 PF02779 Transketolase, pyrimidine binding domain VCSRO96_1885 PF02780 Transketolase, C-terminal domain VCSRO96_1885 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VCSRO96_1886 PF00849 RNA pseudouridylate synthase VCSRO96_1887 PF04287 tRNA pseudouridine synthase C VCSRO96_1890 PF13302 Acetyltransferase (GNAT) domain VCSRO96_1892 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VCSRO96_1893 PF03806 AbgT putative transporter family VCSRO96_1894 PF00444 Ribosomal protein L36 VCSRO96_1895 PF01197 Ribosomal protein L31 VCSRO96_1896 PF18389 TrmO C-terminal domain VCSRO96_1896 PF01980 tRNA-methyltransferase O VCSRO96_1897 PF03129 Anticodon binding domain VCSRO96_1897 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO96_1897 PF04073 Aminoacyl-tRNA editing domain VCSRO96_1899 PF06786 Uncharacterised protein family (UPF0253) VCSRO96_1901 PF02769 AIR synthase related protein, C-terminal domain VCSRO96_1901 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VCSRO96_1901 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VCSRO96_1902 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_1902 PF01464 Transglycosylase SLT domain VCSRO96_1904 PF14437 MafB19-like deaminase VCSRO96_1905 PF03806 AbgT putative transporter family VCSRO96_1910 PF07963 Prokaryotic N-terminal methylation motif VCSRO96_1910 PF00114 Pilin (bacterial filament) VCSRO96_1911 PF00684 DnaJ central domain VCSRO96_1911 PF00226 DnaJ domain VCSRO96_1911 PF01556 DnaJ C terminal domain VCSRO96_1912 PF00012 Hsp70 protein VCSRO96_1913 PF01025 GrpE VCSRO96_1914 PF01513 ATP-NAD kinase VCSRO96_1915 PF02463 RecF/RecN/SMC N terminal domain VCSRO96_1916 PF04355 SmpA / OmlA family VCSRO96_1917 PF03658 RnfH family Ubiquitin VCSRO96_1918 PF03364 Polyketide cyclase / dehydrase and lipid transport VCSRO96_1919 PF01668 SmpB protein VCSRO96_1921 PF00589 Phage integrase family VCSRO96_1921 PF13356 Arm DNA-binding domain VCSRO96_1923 PF09615 CRISPR-associated protein (Cas_Csy3) VCSRO96_1924 PF09614 CRISPR-associated protein (Cas_Csy2) VCSRO96_1925 PF09611 CRISPR-associated protein (Cas_Csy1) VCSRO96_1926 PF18019 HD domain VCSRO96_1927 PF01867 CRISPR associated protein Cas1 VCSRO96_1929 PF05638 Type VI secretion system effector, Hcp VCSRO96_1930 PF04717 Type VI secretion system, phage-baseplate injector VCSRO96_1939 PF00665 Integrase core domain VCSRO96_1940 PF01527 Transposase VCSRO96_1947 PF11953 Domain of unknown function (DUF3470) VCSRO96_1947 PF00037 4Fe-4S binding domain VCSRO96_1948 PF08032 RNA 2'-O ribose methyltransferase substrate binding VCSRO96_1948 PF00588 SpoU rRNA Methylase family VCSRO96_1950 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VCSRO96_1951 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VCSRO96_1952 PF04223 Citrate lyase, alpha subunit (CitF) VCSRO96_1953 PF03328 HpcH/HpaI aldolase/citrate lyase family VCSRO96_1954 PF06857 Malonate decarboxylase delta subunit (MdcD) VCSRO96_1955 PF08218 Citrate lyase ligase C-terminal domain VCSRO96_1956 PF03390 2-hydroxycarboxylate transporter family VCSRO96_1957 PF04277 Oxaloacetate decarboxylase, gamma chain VCSRO96_1958 PF00682 HMGL-like VCSRO96_1958 PF02436 Conserved carboxylase domain VCSRO96_1958 PF00364 Biotin-requiring enzyme VCSRO96_1959 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VCSRO96_1960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_1960 PF17203 Single cache domain 3 VCSRO96_1961 PF12431 Transcriptional regulator VCSRO96_1961 PF00072 Response regulator receiver domain VCSRO96_1964 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_1964 PF03466 LysR substrate binding domain VCSRO96_1965 PF01266 FAD dependent oxidoreductase VCSRO96_1966 PF01235 Sodium:alanine symporter family VCSRO96_1967 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VCSRO96_1967 PF01648 4'-phosphopantetheinyl transferase superfamily VCSRO96_1968 PF00005 ABC transporter VCSRO96_1969 PF01032 FecCD transport family VCSRO96_1970 PF01032 FecCD transport family VCSRO96_1971 PF01497 Periplasmic binding protein VCSRO96_1974 PF00425 chorismate binding enzyme VCSRO96_1975 PF00501 AMP-binding enzyme VCSRO96_1975 PF13193 AMP-binding enzyme C-terminal domain VCSRO96_1976 PF00857 Isochorismatase family VCSRO96_1976 PF00550 Phosphopantetheine attachment site VCSRO96_1977 PF01184 GPR1/FUN34/yaaH family VCSRO96_1978 PF06483 Chitinase C VCSRO96_1978 PF00704 Glycosyl hydrolases family 18 VCSRO96_1979 PF00117 Glutamine amidotransferase class-I VCSRO96_1979 PF02540 NAD synthase VCSRO96_1979 PF00958 GMP synthase C terminal domain VCSRO96_1980 PF00571 CBS domain VCSRO96_1980 PF00478 IMP dehydrogenase / GMP reductase domain VCSRO96_1981 PF02601 Exonuclease VII, large subunit VCSRO96_1981 PF13742 OB-fold nucleic acid binding domain VCSRO96_1984 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VCSRO96_1984 PF01926 50S ribosome-binding GTPase VCSRO96_1985 PF13360 PQQ-like domain VCSRO96_1986 PF09976 Tetratricopeptide repeat-like domain VCSRO96_1987 PF13393 Histidyl-tRNA synthetase VCSRO96_1987 PF03129 Anticodon binding domain VCSRO96_1988 PF04551 GcpE protein VCSRO96_1989 PF13464 Domain of unknown function (DUF4115) VCSRO96_1990 PF04055 Radical SAM superfamily VCSRO96_1991 PF00334 Nucleoside diphosphate kinase VCSRO96_1992 PF00883 Cytosol aminopeptidase family, catalytic domain VCSRO96_1992 PF12404 Peptidase VCSRO96_1993 PF04384 Iron-sulphur cluster assembly VCSRO96_1994 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO96_1995 PF00012 Hsp70 protein VCSRO96_1996 PF07743 HSCB C-terminal oligomerisation domain VCSRO96_1996 PF00226 DnaJ domain VCSRO96_1997 PF01521 Iron-sulphur cluster biosynthesis VCSRO96_1998 PF01592 NifU-like N terminal domain VCSRO96_1999 PF00266 Aminotransferase class-V VCSRO96_2000 PF02082 Transcriptional regulator VCSRO96_2001 PF00588 SpoU rRNA Methylase family VCSRO96_2002 PF00459 Inositol monophosphatase family VCSRO96_2003 PF07549 SecD/SecF GG Motif VCSRO96_2003 PF02355 Protein export membrane protein VCSRO96_2004 PF07549 SecD/SecF GG Motif VCSRO96_2004 PF13721 SecD export protein N-terminal TM region VCSRO96_2004 PF02355 Protein export membrane protein VCSRO96_2005 PF02699 Preprotein translocase subunit VCSRO96_2006 PF01702 Queuine tRNA-ribosyltransferase VCSRO96_2007 PF02547 Queuosine biosynthesis protein VCSRO96_2008 PF00571 CBS domain VCSRO96_2009 PF00463 Isocitrate lyase family VCSRO96_2010 PF01274 Malate synthase VCSRO96_2011 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_2011 PF03466 LysR substrate binding domain VCSRO96_2012 PF10417 C-terminal domain of 1-Cys peroxiredoxin VCSRO96_2012 PF00578 AhpC/TSA family VCSRO96_2013 PF03932 CutC family VCSRO96_2014 PF03976 Polyphosphate kinase 2 (PPK2) VCSRO96_2015 PF01895 PhoU domain VCSRO96_2016 PF00005 ABC transporter VCSRO96_2017 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2018 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2019 PF02503 Polyphosphate kinase middle domain VCSRO96_2019 PF13090 Polyphosphate kinase C-terminal domain 2 VCSRO96_2019 PF17941 Polyphosphate kinase C-terminal domain 1 VCSRO96_2019 PF13089 Polyphosphate kinase N-terminal domain VCSRO96_2020 PF02541 Ppx/GppA phosphatase family VCSRO96_2021 PF12849 PBP superfamily domain VCSRO96_2022 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_2022 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_2022 PF00989 PAS fold VCSRO96_2022 PF11808 Phosphate regulon sensor protein PhoR VCSRO96_2023 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_2023 PF00072 Response regulator receiver domain VCSRO96_2024 PF04381 Putative exonuclease, RdgC VCSRO96_2025 PF01136 Peptidase family U32 VCSRO96_2025 PF16325 Peptidase family U32 C-terminal domain VCSRO96_2026 PF00037 4Fe-4S binding domain VCSRO96_2027 PF00881 Nitroreductase family VCSRO96_2034 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO96_2034 PF07724 AAA domain (Cdc48 subfamily) VCSRO96_2034 PF17871 AAA lid domain VCSRO96_2034 PF02861 Clp amino terminal domain, pathogenicity island component VCSRO96_2034 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO96_2035 PF02578 Multi-copper polyphenol oxidoreductase laccase VCSRO96_2036 PF00849 RNA pseudouridylate synthase VCSRO96_2036 PF01479 S4 domain VCSRO96_2037 PF13525 Outer membrane lipoprotein VCSRO96_2038 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VCSRO96_2039 PF00800 Prephenate dehydratase VCSRO96_2039 PF01817 Chorismate mutase type II VCSRO96_2040 PF13416 Bacterial extracellular solute-binding protein VCSRO96_2041 PF00563 EAL domain VCSRO96_2041 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2042 PF01931 Protein of unknown function DUF84 VCSRO96_2043 PF01371 Trp repressor protein VCSRO96_2044 PF14718 Soluble lytic murein transglycosylase L domain VCSRO96_2044 PF01464 Transglycosylase SLT domain VCSRO96_2045 PF12848 ABC transporter VCSRO96_2045 PF00005 ABC transporter VCSRO96_2046 PF07238 PilZ domain VCSRO96_2047 PF02153 Prephenate dehydrogenase VCSRO96_2047 PF01817 Chorismate mutase type II VCSRO96_2048 PF00793 DAHP synthetase I family VCSRO96_2049 PF07694 5TMR of 5TMR-LYT VCSRO96_2049 PF06580 Histidine kinase VCSRO96_2050 PF04397 LytTr DNA-binding domain VCSRO96_2050 PF00072 Response regulator receiver domain VCSRO96_2051 PF00933 Glycosyl hydrolase family 3 N terminal domain VCSRO96_2052 PF03702 Anhydro-N-acetylmuramic acid kinase VCSRO96_2053 PF13580 SIS domain VCSRO96_2055 PF02554 Carbon starvation protein CstA VCSRO96_2056 PF02401 LytB protein VCSRO96_2057 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO96_2058 PF01252 Signal peptidase (SPase) II VCSRO96_2059 PF08264 Anticodon-binding domain of tRNA VCSRO96_2059 PF00133 tRNA synthetases class I (I, L, M and V) VCSRO96_2059 PF06827 Zinc finger found in FPG and IleRS VCSRO96_2060 PF06574 FAD synthetase VCSRO96_2060 PF01687 Riboflavin kinase VCSRO96_2061 PF03023 Lipid II flippase MurJ VCSRO96_2062 PF01649 Ribosomal protein S20 VCSRO96_2063 PF01022 Bacterial regulatory protein, arsR family VCSRO96_2064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_2064 PF03466 LysR substrate binding domain VCSRO96_2065 PF02690 Na+/Pi-cotransporter VCSRO96_2066 PF00303 Thymidylate synthase VCSRO96_2067 PF01790 Prolipoprotein diacylglyceryl transferase VCSRO96_2068 PF01925 Sulfite exporter TauE/SafE VCSRO96_2069 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO96_2069 PF00391 PEP-utilising enzyme, mobile domain VCSRO96_2069 PF01590 GAF domain VCSRO96_2069 PF05524 PEP-utilising enzyme, N-terminal VCSRO96_2070 PF00293 NUDIX domain VCSRO96_2071 PF02976 DNA mismatch repair enzyme MutH VCSRO96_2072 PF00248 Aldo/keto reductase family VCSRO96_2075 PF02954 Bacterial regulatory protein, Fis family VCSRO96_2075 PF00072 Response regulator receiver domain VCSRO96_2075 PF00158 Sigma-54 interaction domain VCSRO96_2076 PF00152 tRNA synthetases class II (D, K and N) VCSRO96_2076 PF01336 OB-fold nucleic acid binding domain VCSRO96_2077 PF03462 PCRF domain VCSRO96_2077 PF00472 RF-1 domain VCSRO96_2078 PF05525 Branched-chain amino acid transport protein VCSRO96_2079 PF05175 Methyltransferase small domain VCSRO96_2080 PF00270 DEAD/DEAH box helicase VCSRO96_2080 PF00271 Helicase conserved C-terminal domain VCSRO96_2081 PF03144 Elongation factor Tu domain 2 VCSRO96_2081 PF16658 Class II release factor RF3, C-terminal domain VCSRO96_2081 PF00009 Elongation factor Tu GTP binding domain VCSRO96_2082 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_2082 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2082 PF00563 EAL domain VCSRO96_2085 PF13508 Acetyltransferase (GNAT) domain VCSRO96_2086 PF02036 SCP-2 sterol transfer family VCSRO96_2087 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2087 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_2087 PF00563 EAL domain VCSRO96_2088 PF00563 EAL domain VCSRO96_2088 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2088 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_2089 PF01136 Peptidase family U32 VCSRO96_2090 PF01136 Peptidase family U32 VCSRO96_2093 PF07719 Tetratricopeptide repeat VCSRO96_2093 PF13181 Tetratricopeptide repeat VCSRO96_2094 PF03725 3' exoribonuclease family, domain 2 VCSRO96_2094 PF01138 3' exoribonuclease family, domain 1 VCSRO96_2094 PF00575 S1 RNA binding domain VCSRO96_2094 PF00013 KH domain VCSRO96_2094 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VCSRO96_2095 PF00312 Ribosomal protein S15 VCSRO96_2096 PF16198 tRNA pseudouridylate synthase B C-terminal domain VCSRO96_2096 PF09157 Pseudouridine synthase II TruB, C-terminal VCSRO96_2096 PF01509 TruB family pseudouridylate synthase (N terminal domain) VCSRO96_2097 PF02033 Ribosome-binding factor A VCSRO96_2098 PF00009 Elongation factor Tu GTP binding domain VCSRO96_2098 PF11987 Translation-initiation factor 2 VCSRO96_2098 PF08364 Bacterial translation initiation factor IF-2 associated region VCSRO96_2098 PF04760 Translation initiation factor IF-2, N-terminal region VCSRO96_2099 PF13184 NusA-like KH domain VCSRO96_2099 PF08529 NusA N-terminal domain VCSRO96_2099 PF00575 S1 RNA binding domain VCSRO96_2100 PF17384 RimP C-terminal SH3 domain VCSRO96_2100 PF02576 RimP N-terminal domain VCSRO96_2103 PF03840 Preprotein translocase SecG subunit VCSRO96_2105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO96_2105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO96_2105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO96_2105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO96_2106 PF00809 Pterin binding enzyme VCSRO96_2107 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO96_2107 PF01434 Peptidase family M41 VCSRO96_2107 PF06480 FtsH Extracellular VCSRO96_2107 PF17862 AAA+ lid domain VCSRO96_2108 PF01728 FtsJ-like methyltransferase VCSRO96_2109 PF01985 CRS1 / YhbY (CRM) domain VCSRO96_2110 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO96_2110 PF03449 Transcription elongation factor, N-terminal VCSRO96_2111 PF13609 Gram-negative porin VCSRO96_2112 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VCSRO96_2113 PF01479 S4 domain VCSRO96_2113 PF00579 tRNA synthetases class I (W and Y) VCSRO96_2114 PF04225 Opacity-associated protein A LysM-like domain VCSRO96_2114 PF01551 Peptidase family M23 VCSRO96_2115 PF00873 AcrB/AcrD/AcrF family VCSRO96_2117 PF01521 Iron-sulphur cluster biosynthesis VCSRO96_2118 PF00202 Aminotransferase class-III VCSRO96_2120 PF01594 AI-2E family transporter VCSRO96_2121 PF08468 Methyltransferase small domain N-terminal VCSRO96_2121 PF05175 Methyltransferase small domain VCSRO96_2122 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_2122 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_2122 PF09308 LuxQ, periplasmic VCSRO96_2122 PF00072 Response regulator receiver domain VCSRO96_2123 PF13333 Integrase core domain VCSRO96_2123 PF00665 Integrase core domain VCSRO96_2123 PF13276 HTH-like domain VCSRO96_2125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO96_2126 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2127 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO96_2127 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2128 PF00005 ABC transporter VCSRO96_2128 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_2129 PF00005 ABC transporter VCSRO96_2129 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_2131 PF01869 BadF/BadG/BcrA/BcrD ATPase family VCSRO96_2132 PF00728 Glycosyl hydrolase family 20, catalytic domain VCSRO96_2132 PF02838 Glycosyl hydrolase family 20, domain 2 VCSRO96_2133 PF06165 Glycosyltransferase family 36 VCSRO96_2133 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VCSRO96_2134 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO96_2134 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO96_2134 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO96_2134 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO96_2135 PF00005 ABC transporter VCSRO96_2135 PF08402 TOBE domain VCSRO96_2137 PF13416 Bacterial extracellular solute-binding protein VCSRO96_2138 PF00909 Ammonium Transporter Family VCSRO96_2139 PF00543 Nitrogen regulatory protein P-II VCSRO96_2140 PF06062 Uncharacterised protein family (UPF0231) VCSRO96_2141 PF00330 Aconitase family (aconitate hydratase) VCSRO96_2141 PF06434 Aconitate hydratase 2 N-terminus VCSRO96_2141 PF11791 Aconitate B N-terminal domain VCSRO96_2142 PF01734 Patatin-like phospholipase VCSRO96_2143 PF14814 Bifunctional transglycosylase second domain VCSRO96_2143 PF00905 Penicillin binding protein transpeptidase domain VCSRO96_2143 PF00912 Transglycosylase VCSRO96_2144 PF00271 Helicase conserved C-terminal domain VCSRO96_2144 PF04408 Helicase associated domain (HA2) VCSRO96_2144 PF00270 DEAD/DEAH box helicase VCSRO96_2144 PF08482 ATP-dependent helicase C-terminal VCSRO96_2146 PF17746 SfsA N-terminal OB domain VCSRO96_2146 PF03749 Sugar fermentation stimulation protein RE domain VCSRO96_2147 PF01258 Prokaryotic dksA/traR C4-type zinc finger VCSRO96_2148 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCSRO96_2149 PF12627 Probable RNA and SrmB- binding site of polymerase A VCSRO96_2149 PF12626 Polymerase A arginine-rich C-terminus VCSRO96_2149 PF01743 Poly A polymerase head domain VCSRO96_2150 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VCSRO96_2151 PF02548 Ketopantoate hydroxymethyltransferase VCSRO96_2152 PF02569 Pantoate-beta-alanine ligase VCSRO96_2153 PF01061 ABC-2 type transporter VCSRO96_2154 PF00005 ABC transporter VCSRO96_2155 PF01740 STAS domain VCSRO96_2155 PF00916 Sulfate permease family VCSRO96_2156 PF00484 Carbonic anhydrase VCSRO96_2157 PF00156 Phosphoribosyl transferase domain VCSRO96_2158 PF00440 Bacterial regulatory proteins, tetR family VCSRO96_2159 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCSRO96_2160 PF04348 LppC putative lipoprotein VCSRO96_2161 PF02021 Uncharacterised protein family UPF0102 VCSRO96_2162 PF13580 SIS domain VCSRO96_2163 PF04972 BON domain VCSRO96_2164 PF04386 Stringent starvation protein B VCSRO96_2165 PF00043 Glutathione S-transferase, C-terminal domain VCSRO96_2165 PF02798 Glutathione S-transferase, N-terminal domain VCSRO96_2166 PF02167 Cytochrome C1 family VCSRO96_2167 PF00032 Cytochrome b(C-terminal)/b6/petD VCSRO96_2167 PF00033 Cytochrome b/b6/petB VCSRO96_2168 PF00355 Rieske [2Fe-2S] domain VCSRO96_2168 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VCSRO96_2169 PF00380 Ribosomal protein S9/S16 VCSRO96_2170 PF00572 Ribosomal protein L13 VCSRO96_2171 PF03969 AFG1-like ATPase VCSRO96_2173 PF00595 PDZ domain VCSRO96_2174 PF13180 PDZ domain VCSRO96_2175 PF01245 Ribosomal protein L19 VCSRO96_2176 PF01746 tRNA (Guanine-1)-methyltransferase VCSRO96_2177 PF05239 PRC-barrel domain VCSRO96_2177 PF01782 RimM N-terminal domain VCSRO96_2178 PF00886 Ribosomal protein S16 VCSRO96_2179 PF02978 Signal peptide binding domain VCSRO96_2179 PF00448 SRP54-type protein, GTPase domain VCSRO96_2179 PF02881 SRP54-type protein, helical bundle domain VCSRO96_2181 PF01578 Cytochrome C assembly protein VCSRO96_2182 PF03471 Transporter associated domain VCSRO96_2182 PF01595 Cyclin M transmembrane N-terminal domain VCSRO96_2182 PF00571 CBS domain VCSRO96_2183 PF02664 S-Ribosylhomocysteinase (LuxS) VCSRO96_2184 PF04262 Glutamate-cysteine ligase VCSRO96_2185 PF00675 Insulinase (Peptidase family M16) VCSRO96_2185 PF05193 Peptidase M16 inactive domain VCSRO96_2186 PF09335 SNARE associated Golgi protein VCSRO96_2187 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO96_2187 PF00107 Zinc-binding dehydrogenase VCSRO96_2188 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VCSRO96_2189 PF02436 Conserved carboxylase domain VCSRO96_2189 PF00682 HMGL-like VCSRO96_2189 PF00364 Biotin-requiring enzyme VCSRO96_2190 PF04277 Oxaloacetate decarboxylase, gamma chain VCSRO96_2199 PF02599 Global regulator protein family VCSRO96_2200 PF00696 Amino acid kinase family VCSRO96_2200 PF13840 ACT domain VCSRO96_2200 PF01842 ACT domain VCSRO96_2201 PF02272 DHHA1 domain VCSRO96_2201 PF01411 tRNA synthetases class II (A) VCSRO96_2201 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VCSRO96_2202 PF02631 RecX family VCSRO96_2203 PF00154 recA bacterial DNA recombination protein VCSRO96_2204 PF02464 Competence-damaged protein VCSRO96_2205 PF00005 ABC transporter VCSRO96_2205 PF12857 TOBE-like domain VCSRO96_2206 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2207 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2209 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO96_2210 PF05192 MutS domain III VCSRO96_2210 PF01624 MutS domain I VCSRO96_2210 PF05188 MutS domain II VCSRO96_2210 PF00488 MutS domain V VCSRO96_2210 PF05190 MutS family domain IV VCSRO96_2211 PF04542 Sigma-70 region 2 VCSRO96_2211 PF04539 Sigma-70 region 3 VCSRO96_2211 PF04545 Sigma-70, region 4 VCSRO96_2211 PF00140 Sigma-70 factor, region 1.2 VCSRO96_2212 PF00140 Sigma-70 factor, region 1.2 VCSRO96_2212 PF04542 Sigma-70 region 2 VCSRO96_2212 PF04539 Sigma-70 region 3 VCSRO96_2212 PF04545 Sigma-70, region 4 VCSRO96_2213 PF01476 LysM domain VCSRO96_2213 PF01551 Peptidase family M23 VCSRO96_2215 PF01975 Survival protein SurE VCSRO96_2216 PF01142 tRNA pseudouridine synthase D (TruD) VCSRO96_2217 PF02542 YgbB family VCSRO96_2218 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VCSRO96_2219 PF04977 Septum formation initiator VCSRO96_2220 PF02673 Bacitracin resistance protein BacA VCSRO96_2221 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VCSRO96_2222 PF02152 Dihydroneopterin aldolase VCSRO96_2223 PF02660 Glycerol-3-phosphate acyltransferase VCSRO96_2224 PF00561 alpha/beta hydrolase fold VCSRO96_2225 PF00814 Glycoprotease family VCSRO96_2226 PF01165 Ribosomal protein S21 VCSRO96_2227 PF09424 Yqey-like protein VCSRO96_2228 PF08278 DNA primase DnaG DnaB-binding VCSRO96_2228 PF08275 DNA primase catalytic core, N-terminal domain VCSRO96_2228 PF10410 DnaB-helicase binding domain of primase VCSRO96_2228 PF01807 CHC2 zinc finger VCSRO96_2229 PF00140 Sigma-70 factor, region 1.2 VCSRO96_2229 PF04546 Sigma-70, non-essential region VCSRO96_2229 PF03979 Sigma-70 factor, region 1.1 VCSRO96_2229 PF04542 Sigma-70 region 2 VCSRO96_2229 PF04539 Sigma-70 region 3 VCSRO96_2229 PF04545 Sigma-70, region 4 VCSRO96_2232 PF03480 Bacterial extracellular solute-binding protein, family 7 VCSRO96_2236 PF18623 TnsE C-terminal domain VCSRO96_2237 PF15978 Tn7-like transposition protein D VCSRO96_2237 PF06527 TniQ VCSRO96_2238 PF13401 AAA domain VCSRO96_2238 PF11426 Tn7 transposition regulator TnsC VCSRO96_2239 PF00665 Integrase core domain VCSRO96_2240 PF08721 TnsA endonuclease C terminal VCSRO96_2240 PF08722 TnsA endonuclease N terminal VCSRO96_2241 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2241 PF00672 HAMP domain VCSRO96_2241 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_2243 PF01527 Transposase VCSRO96_2244 PF02371 Transposase IS116/IS110/IS902 family VCSRO96_2244 PF01548 Transposase VCSRO96_2245 PF13276 HTH-like domain VCSRO96_2245 PF00665 Integrase core domain VCSRO96_2245 PF13333 Integrase core domain VCSRO96_2246 PF01380 SIS domain VCSRO96_2247 PF08220 DeoR-like helix-turn-helix domain VCSRO96_2247 PF00455 DeoR C terminal sensor domain VCSRO96_2248 PF00224 Pyruvate kinase, barrel domain VCSRO96_2248 PF02887 Pyruvate kinase, alpha/beta domain VCSRO96_2250 PF04402 Protein of unknown function (DUF541) VCSRO96_2251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_2251 PF03466 LysR substrate binding domain VCSRO96_2252 PF01810 LysE type translocator VCSRO96_2253 PF00924 Mechanosensitive ion channel VCSRO96_2253 PF05552 Conserved TM helix VCSRO96_2254 PF01116 Fructose-bisphosphate aldolase class-II VCSRO96_2255 PF00162 Phosphoglycerate kinase VCSRO96_2256 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO96_2256 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO96_2257 PF07715 TonB-dependent Receptor Plug Domain VCSRO96_2257 PF00593 TonB dependent receptor VCSRO96_2258 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_2258 PF03466 LysR substrate binding domain VCSRO96_2259 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO96_2259 PF02780 Transketolase, C-terminal domain VCSRO96_2259 PF02779 Transketolase, pyrimidine binding domain VCSRO96_2260 PF00438 S-adenosylmethionine synthetase, N-terminal domain VCSRO96_2260 PF02773 S-adenosylmethionine synthetase, C-terminal domain VCSRO96_2260 PF02772 S-adenosylmethionine synthetase, central domain VCSRO96_2261 PF10263 SprT-like family VCSRO96_2261 PF17283 SprT-like zinc ribbon domain VCSRO96_2262 PF04231 Endonuclease I VCSRO96_2263 PF04452 RNA methyltransferase VCSRO96_2264 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VCSRO96_2264 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VCSRO96_2265 PF02622 Uncharacterized ACR, COG1678 VCSRO96_2266 PF03652 Holliday junction resolvase VCSRO96_2267 PF01479 S4 domain VCSRO96_2267 PF00579 tRNA synthetases class I (W and Y) VCSRO96_2269 PF00437 Type II/IV secretion system protein VCSRO96_2270 PF00437 Type II/IV secretion system protein VCSRO96_2271 PF01168 Alanine racemase, N-terminal domain VCSRO96_2272 PF14748 Pyrroline-5-carboxylate reductase dimerisation VCSRO96_2272 PF03807 NADP oxidoreductase coenzyme F420-dependent VCSRO96_2273 PF02325 YGGT family VCSRO96_2274 PF02594 Uncharacterised ACR, YggU family COG1872 VCSRO96_2276 PF01725 Ham1 family VCSRO96_2277 PF04055 Radical SAM superfamily VCSRO96_2277 PF06969 HemN C-terminal domain VCSRO96_2278 PF04960 Glutaminase VCSRO96_2279 PF02390 Putative methyltransferase VCSRO96_2280 PF10576 Iron-sulfur binding domain of endonuclease III VCSRO96_2280 PF00633 Helix-hairpin-helix motif VCSRO96_2280 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO96_2280 PF14815 NUDIX domain VCSRO96_2281 PF04362 Bacterial Fe(2+) trafficking VCSRO96_2282 PF01464 Transglycosylase SLT domain VCSRO96_2282 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VCSRO96_2287 PF17200 Single Cache domain 2 VCSRO96_2287 PF00672 HAMP domain VCSRO96_2287 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2293 PF05099 Tellurite resistance protein TerB VCSRO96_2293 PF00226 DnaJ domain VCSRO96_2294 PF03968 OstA-like protein VCSRO96_2294 PF04453 LPS transport system D VCSRO96_2295 PF09312 SurA N-terminal domain VCSRO96_2296 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VCSRO96_2297 PF00398 Ribosomal RNA adenine dimethylase VCSRO96_2298 PF04379 ApaG domain VCSRO96_2299 PF00149 Calcineurin-like phosphoesterase VCSRO96_2300 PF00186 Dihydrofolate reductase VCSRO96_2301 PF12821 Threonine/Serine exporter, ThrE VCSRO96_2302 PF06738 Putative threonine/serine exporter VCSRO96_2303 PF01018 GTP1/OBG VCSRO96_2303 PF01926 50S ribosome-binding GTPase VCSRO96_2304 PF01016 Ribosomal L27 protein VCSRO96_2305 PF00829 Ribosomal prokaryotic L21 protein VCSRO96_2306 PF00348 Polyprenyl synthetase VCSRO96_2307 PF13520 Amino acid permease VCSRO96_2308 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VCSRO96_2308 PF00056 lactate/malate dehydrogenase, NAD binding domain VCSRO96_2309 PF01316 Arginine repressor, DNA binding domain VCSRO96_2309 PF02863 Arginine repressor, C-terminal domain VCSRO96_2310 PF16868 NMT1-like family VCSRO96_2312 PF00582 Universal stress protein family VCSRO96_2315 PF06877 Regulator of ribonuclease activity B VCSRO96_2317 PF00970 Oxidoreductase FAD-binding domain VCSRO96_2317 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO96_2317 PF00175 Oxidoreductase NAD-binding domain VCSRO96_2318 PF03063 Prismane/CO dehydrogenase family VCSRO96_2319 PF01523 Putative modulator of DNA gyrase VCSRO96_2320 PF00795 Carbon-nitrogen hydrolase VCSRO96_2322 PF13502 AsmA-like C-terminal region VCSRO96_2322 PF13116 Protein of unknown function VCSRO96_2323 PF10150 Ribonuclease E/G family VCSRO96_2323 PF00575 S1 RNA binding domain VCSRO96_2324 PF02545 Maf-like protein VCSRO96_2325 PF04093 rod shape-determining protein MreD VCSRO96_2326 PF04085 rod shape-determining protein MreC VCSRO96_2333 PF07963 Prokaryotic N-terminal methylation motif VCSRO96_2334 PF07963 Prokaryotic N-terminal methylation motif VCSRO96_2336 PF00482 Type II secretion system (T2SS), protein F VCSRO96_2337 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VCSRO96_2337 PF00437 Type II/IV secretion system protein VCSRO96_2339 PF13401 AAA domain VCSRO96_2339 PF01471 Putative peptidoglycan binding domain VCSRO96_2340 PF00263 Bacterial type II and III secretion system protein VCSRO96_2340 PF03958 Bacterial type II/III secretion system short domain VCSRO96_2340 PF07660 Secretin and TonB N terminus short domain VCSRO96_2340 PF11741 AMIN domain VCSRO96_2344 PF00563 EAL domain VCSRO96_2344 PF17157 Gammaproteobacterial periplasmic sensor domain VCSRO96_2344 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2345 PF00436 Single-strand binding protein family VCSRO96_2346 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_2347 PF00483 Nucleotidyl transferase VCSRO96_2348 PF17755 UvrA DNA-binding domain VCSRO96_2348 PF00005 ABC transporter VCSRO96_2348 PF17760 UvrA interaction domain VCSRO96_2350 PF00266 Aminotransferase class-V VCSRO96_2351 PF00696 Amino acid kinase family VCSRO96_2351 PF01842 ACT domain VCSRO96_2352 PF00809 Pterin binding enzyme VCSRO96_2352 PF02607 B12 binding domain VCSRO96_2352 PF02310 B12 binding domain VCSRO96_2352 PF02965 Vitamin B12 dependent methionine synthase, activation domain VCSRO96_2352 PF02574 Homocysteine S-methyltransferase VCSRO96_2353 PF00999 Sodium/hydrogen exchanger family VCSRO96_2360 PF01507 Phosphoadenosine phosphosulfate reductase family VCSRO96_2361 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VCSRO96_2361 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VCSRO96_2362 PF00175 Oxidoreductase NAD-binding domain VCSRO96_2362 PF00258 Flavodoxin VCSRO96_2362 PF00667 FAD binding domain VCSRO96_2365 PF09583 Phage shock protein G (Phageshock_PspG) VCSRO96_2366 PF01207 Dihydrouridine synthase (Dus) VCSRO96_2367 PF01475 Ferric uptake regulator family VCSRO96_2369 PF12706 Beta-lactamase superfamily domain VCSRO96_2370 PF00342 Phosphoglucose isomerase VCSRO96_2371 PF01894 Uncharacterised protein family UPF0047 VCSRO96_2372 PF01168 Alanine racemase, N-terminal domain VCSRO96_2372 PF00842 Alanine racemase, C-terminal domain VCSRO96_2373 PF03796 DnaB-like helicase C terminal domain VCSRO96_2373 PF00772 DnaB-like helicase N terminal domain VCSRO96_2375 PF03948 Ribosomal protein L9, C-terminal domain VCSRO96_2375 PF01281 Ribosomal protein L9, N-terminal domain VCSRO96_2376 PF01084 Ribosomal protein S18 VCSRO96_2377 PF00436 Single-strand binding protein family VCSRO96_2378 PF01250 Ribosomal protein S6 VCSRO96_2379 PF00210 Ferritin-like domain VCSRO96_2380 PF04324 BFD-like [2Fe-2S] binding domain VCSRO96_2381 PF03143 Elongation factor Tu C-terminal domain VCSRO96_2381 PF03144 Elongation factor Tu domain 2 VCSRO96_2381 PF00009 Elongation factor Tu GTP binding domain VCSRO96_2382 PF03144 Elongation factor Tu domain 2 VCSRO96_2382 PF03764 Elongation factor G, domain IV VCSRO96_2382 PF14492 Elongation Factor G, domain II VCSRO96_2382 PF00009 Elongation factor Tu GTP binding domain VCSRO96_2382 PF00679 Elongation factor G C-terminus VCSRO96_2383 PF00177 Ribosomal protein S7p/S5e VCSRO96_2384 PF00164 Ribosomal protein S12/S23 VCSRO96_2386 PF02635 DsrE/DsrF-like family VCSRO96_2387 PF02635 DsrE/DsrF-like family VCSRO96_2388 PF13309 HTH domain VCSRO96_2388 PF08348 YheO-like PAS domain VCSRO96_2389 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO96_2389 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO96_2391 PF04102 SlyX VCSRO96_2393 PF01145 SPFH domain / Band 7 family VCSRO96_2394 PF01145 SPFH domain / Band 7 family VCSRO96_2394 PF12221 Bacterial membrane protein N terminal VCSRO96_2395 PF16360 GTP-binding GTPase Middle Region VCSRO96_2395 PF13167 GTP-binding GTPase N-terminal VCSRO96_2395 PF01926 50S ribosome-binding GTPase VCSRO96_2396 PF17209 Hfq protein VCSRO96_2398 PF01119 DNA mismatch repair protein, C-terminal domain VCSRO96_2398 PF08676 MutL C terminal dimerisation domain VCSRO96_2399 PF01520 N-acetylmuramoyl-L-alanine amidase VCSRO96_2400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VCSRO96_2401 PF08331 Domain of unknown function (DUF1730) VCSRO96_2410 PF00929 Exonuclease VCSRO96_2411 PF03193 RsgA GTPase VCSRO96_2412 PF02666 Phosphatidylserine decarboxylase VCSRO96_2413 PF00939 Sodium:sulfate symporter transmembrane region VCSRO96_2415 PF01676 Metalloenzyme superfamily VCSRO96_2415 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VCSRO96_2416 PF01551 Peptidase family M23 VCSRO96_2418 PF08360 QacR-like protein, C-terminal region VCSRO96_2418 PF00440 Bacterial regulatory proteins, tetR family VCSRO96_2419 PF01208 Uroporphyrinogen decarboxylase (URO-D) VCSRO96_2420 PF00293 NUDIX domain VCSRO96_2420 PF09297 NADH pyrophosphatase zinc ribbon domain VCSRO96_2421 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VCSRO96_2422 PF04983 RNA polymerase Rpb1, domain 3 VCSRO96_2422 PF04998 RNA polymerase Rpb1, domain 5 VCSRO96_2422 PF05000 RNA polymerase Rpb1, domain 4 VCSRO96_2422 PF04997 RNA polymerase Rpb1, domain 1 VCSRO96_2422 PF00623 RNA polymerase Rpb1, domain 2 VCSRO96_2423 PF04560 RNA polymerase Rpb2, domain 7 VCSRO96_2423 PF10385 RNA polymerase beta subunit external 1 domain VCSRO96_2423 PF04563 RNA polymerase beta subunit VCSRO96_2423 PF04561 RNA polymerase Rpb2, domain 2 VCSRO96_2423 PF04565 RNA polymerase Rpb2, domain 3 VCSRO96_2423 PF00562 RNA polymerase Rpb2, domain 6 VCSRO96_2424 PF00542 Ribosomal protein L7/L12 C-terminal domain VCSRO96_2424 PF16320 Ribosomal protein L7/L12 dimerisation domain VCSRO96_2425 PF00466 Ribosomal protein L10 VCSRO96_2426 PF00687 Ribosomal protein L1p/L10e family VCSRO96_2427 PF03946 Ribosomal protein L11, N-terminal domain VCSRO96_2427 PF00298 Ribosomal protein L11, RNA binding domain VCSRO96_2428 PF00467 KOW motif VCSRO96_2428 PF02357 Transcription termination factor nusG VCSRO96_2429 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VCSRO96_2430 PF03144 Elongation factor Tu domain 2 VCSRO96_2430 PF00009 Elongation factor Tu GTP binding domain VCSRO96_2430 PF03143 Elongation factor Tu C-terminal domain VCSRO96_2435 PF00485 Phosphoribulokinase / Uridine kinase family VCSRO96_2436 PF02237 Biotin protein ligase C terminal domain VCSRO96_2436 PF03099 Biotin/lipoate A/B protein ligase family VCSRO96_2436 PF08279 HTH domain VCSRO96_2437 PF01565 FAD binding domain VCSRO96_2437 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VCSRO96_2439 PF13091 PLD-like domain VCSRO96_2446 PF00175 Oxidoreductase NAD-binding domain VCSRO96_2447 PF00970 Oxidoreductase FAD-binding domain VCSRO96_2447 PF00175 Oxidoreductase NAD-binding domain VCSRO96_2447 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO96_2448 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VCSRO96_2450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO96_2450 PF07497 Rho termination factor, RNA-binding domain VCSRO96_2450 PF07498 Rho termination factor, N-terminal domain VCSRO96_2451 PF00085 Thioredoxin VCSRO96_2452 PF00270 DEAD/DEAH box helicase VCSRO96_2452 PF00271 Helicase conserved C-terminal domain VCSRO96_2453 PF02541 Ppx/GppA phosphatase family VCSRO96_2454 PF00072 Response regulator receiver domain VCSRO96_2454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_2454 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_2454 PF09456 RcsC Alpha-Beta-Loop (ABL) VCSRO96_2455 PF12832 MFS_1 like family VCSRO96_2458 PF00501 AMP-binding enzyme VCSRO96_2458 PF16177 Acetyl-coenzyme A synthetase N-terminus VCSRO96_2458 PF13193 AMP-binding enzyme C-terminal domain VCSRO96_2459 PF01220 Dehydroquinase class II VCSRO96_2460 PF00364 Biotin-requiring enzyme VCSRO96_2461 PF02785 Biotin carboxylase C-terminal domain VCSRO96_2461 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VCSRO96_2461 PF00289 Biotin carboxylase, N-terminal domain VCSRO96_2463 PF01207 Dihydrouridine synthase (Dus) VCSRO96_2464 PF02954 Bacterial regulatory protein, Fis family VCSRO96_2465 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO96_2465 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_2466 PF00920 Dehydratase family VCSRO96_2467 PF01202 Shikimate kinase VCSRO96_2468 PF02447 GntP family permease VCSRO96_2469 PF01081 KDPG and KHG aldolase VCSRO96_2470 PF00593 TonB dependent receptor VCSRO96_2470 PF07715 TonB-dependent Receptor Plug Domain VCSRO96_2471 PF13006 Insertion element 4 transposase N-terminal VCSRO96_2471 PF01609 Transposase DDE domain VCSRO96_2473 PF17200 Single Cache domain 2 VCSRO96_2473 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2473 PF00672 HAMP domain VCSRO96_2474 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VCSRO96_2474 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VCSRO96_2474 PF01276 Orn/Lys/Arg decarboxylase, major domain VCSRO96_2475 PF13520 Amino acid permease VCSRO96_2476 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_2476 PF18500 CadC C-terminal domain 1 VCSRO96_2477 PF13411 MerR HTH family regulatory protein VCSRO96_2478 PF01808 AICARFT/IMPCHase bienzyme VCSRO96_2478 PF02142 MGS-like domain VCSRO96_2479 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VCSRO96_2479 PF02843 Phosphoribosylglycinamide synthetase, C domain VCSRO96_2479 PF02844 Phosphoribosylglycinamide synthetase, N domain VCSRO96_2481 PF00216 Bacterial DNA-binding protein VCSRO96_2482 PF00571 CBS domain VCSRO96_2482 PF01595 Cyclin M transmembrane N-terminal domain VCSRO96_2484 PF04222 Protein of unknown function (DUF416) VCSRO96_2485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO96_2486 PF03167 Uracil DNA glycosylase superfamily VCSRO96_2487 PF00924 Mechanosensitive ion channel VCSRO96_2490 PF10996 Beta-Casp domain VCSRO96_2490 PF00753 Metallo-beta-lactamase superfamily VCSRO96_2490 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VCSRO96_2491 PF01609 Transposase DDE domain VCSRO96_2491 PF13006 Insertion element 4 transposase N-terminal VCSRO96_2492 PF02397 Bacterial sugar transferase VCSRO96_2493 PF01609 Transposase DDE domain VCSRO96_2493 PF13808 DDE_Tnp_1-associated VCSRO96_2494 PF02096 60Kd inner membrane protein VCSRO96_2494 PF14849 YidC periplasmic domain VCSRO96_2497 PF00483 Nucleotidyl transferase VCSRO96_2498 PF00117 Glutamine amidotransferase class-I VCSRO96_2499 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VCSRO96_2499 PF00391 PEP-utilising enzyme, mobile domain VCSRO96_2501 PF13808 DDE_Tnp_1-associated VCSRO96_2501 PF01609 Transposase DDE domain VCSRO96_2503 PF08645 Polynucleotide kinase 3 phosphatase VCSRO96_2504 PF00483 Nucleotidyl transferase VCSRO96_2505 PF13580 SIS domain VCSRO96_2506 PF08544 GHMP kinases C terminal VCSRO96_2506 PF00288 GHMP kinases N terminal domain VCSRO96_2510 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_2511 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_2514 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VCSRO96_2515 PF00483 Nucleotidyl transferase VCSRO96_2516 PF16363 GDP-mannose 4,6 dehydratase VCSRO96_2517 PF02706 Chain length determinant protein VCSRO96_2518 PF01370 NAD dependent epimerase/dehydratase family VCSRO96_2523 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO96_2524 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VCSRO96_2525 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VCSRO96_2531 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO96_2532 PF00535 Glycosyl transferase family 2 VCSRO96_2533 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCSRO96_2534 PF01467 Cytidylyltransferase-like VCSRO96_2535 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VCSRO96_2535 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VCSRO96_2535 PF06827 Zinc finger found in FPG and IleRS VCSRO96_2537 PF00471 Ribosomal protein L33 VCSRO96_2538 PF00830 Ribosomal L28 family VCSRO96_2539 PF04002 RadC-like JAB domain VCSRO96_2540 PF02743 Cache domain VCSRO96_2540 PF00672 HAMP domain VCSRO96_2540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2541 PF04127 DNA / pantothenate metabolism flavoprotein VCSRO96_2541 PF02441 Flavoprotein VCSRO96_2542 PF00440 Bacterial regulatory proteins, tetR family VCSRO96_2543 PF03279 Bacterial lipid A biosynthesis acyltransferase VCSRO96_2544 PF03279 Bacterial lipid A biosynthesis acyltransferase VCSRO96_2545 PF00156 Phosphoribosyl transferase domain VCSRO96_2546 PF01138 3' exoribonuclease family, domain 1 VCSRO96_2546 PF03725 3' exoribonuclease family, domain 2 VCSRO96_2547 PF08340 Domain of unknown function (DUF1732) VCSRO96_2547 PF03755 YicC-like family, N-terminal region VCSRO96_2557 PF00271 Helicase conserved C-terminal domain VCSRO96_2557 PF00176 SNF2 family N-terminal domain VCSRO96_2559 PF01555 DNA methylase VCSRO96_2559 PF18273 Type III R-M EcoP15I C-terminal domain VCSRO96_2560 PF04851 Type III restriction enzyme, res subunit VCSRO96_2560 PF08774 VRR-NUC domain VCSRO96_2561 PF03350 Uncharacterized protein family, UPF0114 VCSRO96_2562 PF01609 Transposase DDE domain VCSRO96_2562 PF13006 Insertion element 4 transposase N-terminal VCSRO96_2563 PF00367 phosphotransferase system, EIIB VCSRO96_2563 PF02378 Phosphotransferase system, EIIC VCSRO96_2564 PF13580 SIS domain VCSRO96_2565 PF01418 Helix-turn-helix domain, rpiR family VCSRO96_2565 PF01380 SIS domain VCSRO96_2566 PF01032 FecCD transport family VCSRO96_2567 PF01497 Periplasmic binding protein VCSRO96_2568 PF00005 ABC transporter VCSRO96_2569 PF07715 TonB-dependent Receptor Plug Domain VCSRO96_2569 PF00593 TonB dependent receptor VCSRO96_2570 PF00664 ABC transporter transmembrane region VCSRO96_2570 PF00005 ABC transporter VCSRO96_2573 PF00270 DEAD/DEAH box helicase VCSRO96_2573 PF00570 HRDC domain VCSRO96_2573 PF16124 RecQ zinc-binding VCSRO96_2573 PF09382 RQC domain VCSRO96_2573 PF00271 Helicase conserved C-terminal domain VCSRO96_2574 PF00892 EamA-like transporter family VCSRO96_2576 PF12833 Helix-turn-helix domain VCSRO96_2577 PF01810 LysE type translocator VCSRO96_2578 PF00580 UvrD/REP helicase N-terminal domain VCSRO96_2578 PF13361 UvrD-like helicase C-terminal domain VCSRO96_2579 PF01432 Peptidase family M3 VCSRO96_2580 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VCSRO96_2581 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO96_2581 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_2583 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO96_2583 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2584 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO96_2586 PF00005 ABC transporter VCSRO96_2586 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_2592 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCSRO96_2593 PF00580 UvrD/REP helicase N-terminal domain VCSRO96_2593 PF13361 UvrD-like helicase C-terminal domain VCSRO96_2594 PF00440 Bacterial regulatory proteins, tetR family VCSRO96_2595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCSRO96_2596 PF00873 AcrB/AcrD/AcrF family VCSRO96_2597 PF04380 Membrane fusogenic activity VCSRO96_2598 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VCSRO96_2598 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VCSRO96_2599 PF03466 LysR substrate binding domain VCSRO96_2599 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_2612 PF12724 Flavodoxin domain VCSRO96_2613 PF02386 Cation transport protein VCSRO96_2614 PF09186 Domain of unknown function (DUF1949) VCSRO96_2614 PF01205 Uncharacterized protein family UPF0029 VCSRO96_2615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VCSRO96_2615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VCSRO96_2615 PF00378 Enoyl-CoA hydratase/isomerase VCSRO96_2616 PF00108 Thiolase, N-terminal domain VCSRO96_2616 PF02803 Thiolase, C-terminal domain VCSRO96_2617 PF03466 LysR substrate binding domain VCSRO96_2617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_2618 PF07690 Major Facilitator Superfamily VCSRO96_2619 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_2619 PF12804 MobA-like NTP transferase domain VCSRO96_2620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VCSRO96_2620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VCSRO96_2621 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO96_2621 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCSRO96_2622 PF00231 ATP synthase VCSRO96_2623 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCSRO96_2623 PF00306 ATP synthase alpha/beta chain, C terminal domain VCSRO96_2623 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCSRO96_2624 PF00213 ATP synthase delta (OSCP) subunit VCSRO96_2625 PF00430 ATP synthase B/B' CF(0) VCSRO96_2626 PF00137 ATP synthase subunit C VCSRO96_2627 PF00119 ATP synthase A chain VCSRO96_2628 PF03899 ATP synthase I chain VCSRO96_2629 PF17762 HTH domain found in ParB protein VCSRO96_2629 PF02195 ParB-like nuclease domain VCSRO96_2630 PF13614 AAA domain VCSRO96_2631 PF02527 rRNA small subunit methyltransferase G VCSRO96_2632 PF01134 Glucose inhibited division protein A VCSRO96_2632 PF13932 GidA associated domain VCSRO96_2637 PF01709 Transcriptional regulator VCSRO96_2638 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VCSRO96_2638 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VCSRO96_2639 PF00672 HAMP domain VCSRO96_2639 PF17200 Single Cache domain 2 VCSRO96_2639 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2640 PF10928 Protein of unknown function (DUF2810) VCSRO96_2641 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_2641 PF17874 MalT-like TPR region VCSRO96_2642 PF00343 Carbohydrate phosphorylase VCSRO96_2643 PF02446 4-alpha-glucanotransferase VCSRO96_2644 PF02806 Alpha amylase, C-terminal all-beta domain VCSRO96_2644 PF00128 Alpha amylase, catalytic domain VCSRO96_2644 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO96_2645 PF05638 Type VI secretion system effector, Hcp VCSRO96_2646 PF04717 Type VI secretion system, phage-baseplate injector VCSRO96_2652 PF01757 Acyltransferase family VCSRO96_2652 PF01168 Alanine racemase, N-terminal domain VCSRO96_2652 PF00842 Alanine racemase, C-terminal domain VCSRO96_2654 PF00939 Sodium:sulfate symporter transmembrane region VCSRO96_2655 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCSRO96_2656 PF00704 Glycosyl hydrolases family 18 VCSRO96_2656 PF08329 Chitinase A, N-terminal domain VCSRO96_2659 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2659 PF00672 HAMP domain VCSRO96_2663 PF01569 PAP2 superfamily VCSRO96_2664 PF00375 Sodium:dicarboxylate symporter family VCSRO96_2666 PF02630 SCO1/SenC VCSRO96_2669 PF03616 Sodium/glutamate symporter VCSRO96_2670 PF07238 PilZ domain VCSRO96_2670 PF12945 Flagellar protein YcgR VCSRO96_2673 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2675 PF01048 Phosphorylase superfamily VCSRO96_2676 PF08349 Protein of unknown function (DUF1722) VCSRO96_2677 PF13411 MerR HTH family regulatory protein VCSRO96_2678 PF00875 DNA photolyase VCSRO96_2678 PF03441 FAD binding domain of DNA photolyase VCSRO96_2679 PF17969 L,D-transpeptidase C-terminal domain VCSRO96_2679 PF01476 LysM domain VCSRO96_2679 PF03734 L,D-transpeptidase catalytic domain VCSRO96_2681 PF00270 DEAD/DEAH box helicase VCSRO96_2681 PF00271 Helicase conserved C-terminal domain VCSRO96_2682 PF00326 Prolyl oligopeptidase family VCSRO96_2682 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VCSRO96_2683 PF00593 TonB dependent receptor VCSRO96_2683 PF07715 TonB-dependent Receptor Plug Domain VCSRO96_2687 PF12849 PBP superfamily domain VCSRO96_2688 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2689 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2690 PF00005 ABC transporter VCSRO96_2691 PF00563 EAL domain VCSRO96_2691 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2691 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_2693 PF07670 Nucleoside recognition VCSRO96_2694 PF01740 STAS domain VCSRO96_2694 PF00916 Sulfate permease family VCSRO96_2696 PF08525 Opacity-associated protein A N-terminal motif VCSRO96_2696 PF01551 Peptidase family M23 VCSRO96_2696 PF01476 LysM domain VCSRO96_2697 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2697 PF13188 PAS domain VCSRO96_2697 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_2697 PF00563 EAL domain VCSRO96_2699 PF03466 LysR substrate binding domain VCSRO96_2699 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_2700 PF07690 Major Facilitator Superfamily VCSRO96_2701 PF00376 MerR family regulatory protein VCSRO96_2701 PF09278 MerR, DNA binding VCSRO96_2705 PF00375 Sodium:dicarboxylate symporter family VCSRO96_2707 PF02001 Protein of unknown function DUF134 VCSRO96_2711 PF07504 Fungalysin/Thermolysin Propeptide Motif VCSRO96_2711 PF01483 Proprotein convertase P-domain VCSRO96_2711 PF01447 Thermolysin metallopeptidase, catalytic domain VCSRO96_2711 PF02868 Thermolysin metallopeptidase, alpha-helical domain VCSRO96_2713 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VCSRO96_2713 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VCSRO96_2714 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VCSRO96_2714 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCSRO96_2715 PF00581 Rhodanese-like domain VCSRO96_2716 PF00563 EAL domain VCSRO96_2716 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_2717 PF13419 Haloacid dehalogenase-like hydrolase VCSRO96_2718 PF00916 Sulfate permease family VCSRO96_2718 PF01740 STAS domain VCSRO96_2719 PF00849 RNA pseudouridylate synthase VCSRO96_2723 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VCSRO96_2725 PF05947 Type VI secretion system, TssF VCSRO96_2729 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VCSRO96_2731 PF07724 AAA domain (Cdc48 subfamily) VCSRO96_2731 PF17871 AAA lid domain VCSRO96_2731 PF00004 ATPase family associated with various cellular activities (AAA) VCSRO96_2731 PF10431 C-terminal, D2-small domain, of ClpB protein VCSRO96_2732 PF00158 Sigma-54 interaction domain VCSRO96_2732 PF02954 Bacterial regulatory protein, Fis family VCSRO96_2735 PF06761 Intracellular multiplication and human macrophage-killing VCSRO96_2735 PF06744 Type VI secretion protein IcmF C-terminal VCSRO96_2735 PF14331 ImcF-related N-terminal domain VCSRO96_2737 PF04717 Type VI secretion system, phage-baseplate injector VCSRO96_2737 PF01471 Putative peptidoglycan binding domain VCSRO96_2741 PF05025 RbsD / FucU transport protein family VCSRO96_2742 PF00005 ABC transporter VCSRO96_2743 PF02653 Branched-chain amino acid transport system / permease component VCSRO96_2744 PF13407 Periplasmic binding protein domain VCSRO96_2745 PF00294 pfkB family carbohydrate kinase VCSRO96_2746 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_2747 PF04973 Nicotinamide mononucleotide transporter VCSRO96_2748 PF01048 Phosphorylase superfamily VCSRO96_2750 PF03009 Glycerophosphoryl diester phosphodiesterase family VCSRO96_2751 PF07690 Major Facilitator Superfamily VCSRO96_2754 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_2754 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_2754 PF02743 Cache domain VCSRO96_2755 PF02954 Bacterial regulatory protein, Fis family VCSRO96_2755 PF00072 Response regulator receiver domain VCSRO96_2755 PF00158 Sigma-54 interaction domain VCSRO96_2758 PF01266 FAD dependent oxidoreductase VCSRO96_2759 PF00041 Fibronectin type III domain VCSRO96_2759 PF12561 ToxR activated gene A lipoprotein domain VCSRO96_2760 PF01327 Polypeptide deformylase VCSRO96_2761 PF03611 PTS system sugar-specific permease component VCSRO96_2763 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO96_2764 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_2766 PF03334 Na+/H+ antiporter subunit VCSRO96_2767 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VCSRO96_2768 PF01899 Na+/H+ ion antiporter subunit VCSRO96_2769 PF00361 Proton-conducting membrane transporter VCSRO96_2770 PF00361 Proton-conducting membrane transporter VCSRO96_2771 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VCSRO96_2772 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCSRO96_2772 PF00361 Proton-conducting membrane transporter VCSRO96_2772 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VCSRO96_2772 PF13244 Domain of unknown function (DUF4040) VCSRO96_2773 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCSRO96_2773 PF00361 Proton-conducting membrane transporter VCSRO96_2773 PF13244 Domain of unknown function (DUF4040) VCSRO96_2774 PF00361 Proton-conducting membrane transporter VCSRO96_2774 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCSRO96_2774 PF13244 Domain of unknown function (DUF4040) VCSRO96_2776 PF00582 Universal stress protein family VCSRO96_2777 PF03222 Tryptophan/tyrosine permease family VCSRO96_2778 PF01212 Beta-eliminating lyase VCSRO96_2780 PF12843 Putative quorum-sensing-regulated virulence factor VCSRO96_2782 PF00563 EAL domain VCSRO96_2782 PF08448 PAS fold VCSRO96_2782 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2783 PF00313 'Cold-shock' DNA-binding domain VCSRO96_2786 PF07584 Aerotolerance regulator N-terminal VCSRO96_2786 PF13519 von Willebrand factor type A domain VCSRO96_2789 PF01882 Protein of unknown function DUF58 VCSRO96_2790 PF07726 ATPase family associated with various cellular activities (AAA) VCSRO96_2790 PF17863 AAA lid domain VCSRO96_2791 PF02743 Cache domain VCSRO96_2791 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2791 PF00672 HAMP domain VCSRO96_2794 PF01773 Na+ dependent nucleoside transporter N-terminus VCSRO96_2794 PF07662 Na+ dependent nucleoside transporter C-terminus VCSRO96_2794 PF07670 Nucleoside recognition VCSRO96_2795 PF07687 Peptidase dimerisation domain VCSRO96_2795 PF01546 Peptidase family M20/M25/M40 VCSRO96_2797 PF01590 GAF domain VCSRO96_2797 PF00158 Sigma-54 interaction domain VCSRO96_2798 PF00970 Oxidoreductase FAD-binding domain VCSRO96_2798 PF00175 Oxidoreductase NAD-binding domain VCSRO96_2798 PF00042 Globin VCSRO96_2799 PF00313 'Cold-shock' DNA-binding domain VCSRO96_2800 PF03889 Alternative ribosome-rescue factor A VCSRO96_2803 PF00072 Response regulator receiver domain VCSRO96_2805 PF03853 YjeF-related protein N-terminus VCSRO96_2805 PF01256 Carbohydrate kinase VCSRO96_2806 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO96_2806 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO96_2808 PF07885 Ion channel VCSRO96_2810 PF00478 IMP dehydrogenase / GMP reductase domain VCSRO96_2812 PF09299 Mu transposase, C-terminal VCSRO96_2812 PF00665 Integrase core domain VCSRO96_2818 PF01609 Transposase DDE domain VCSRO96_2818 PF13808 DDE_Tnp_1-associated VCSRO96_2819 PF01695 IstB-like ATP binding protein VCSRO96_2820 PF08281 Sigma-70, region 4 VCSRO96_2820 PF00665 Integrase core domain VCSRO96_2821 PF00665 Integrase core domain VCSRO96_2822 PF13333 Integrase core domain VCSRO96_2822 PF00665 Integrase core domain VCSRO96_2822 PF13276 HTH-like domain VCSRO96_2825 PF09615 CRISPR-associated protein (Cas_Csy3) VCSRO96_2828 PF05598 Transposase domain (DUF772) VCSRO96_2828 PF01609 Transposase DDE domain VCSRO96_2829 PF05598 Transposase domain (DUF772) VCSRO96_2829 PF01609 Transposase DDE domain VCSRO96_2830 PF14583 Oligogalacturonate lyase VCSRO96_2831 PF00474 Sodium:solute symporter family VCSRO96_2832 PF01554 MatE VCSRO96_2833 PF06917 Periplasmic pectate lyase VCSRO96_2834 PF13416 Bacterial extracellular solute-binding protein VCSRO96_2835 PF00005 ABC transporter VCSRO96_2835 PF03459 TOBE domain VCSRO96_2835 PF17912 MalK OB fold domain VCSRO96_2836 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2837 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_2839 PF13229 Right handed beta helix region VCSRO96_2840 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_2840 PF00672 HAMP domain VCSRO96_2840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2841 PF01095 Pectinesterase VCSRO96_2842 PF01081 KDPG and KHG aldolase VCSRO96_2843 PF00294 pfkB family carbohydrate kinase VCSRO96_2844 PF12833 Helix-turn-helix domain VCSRO96_2844 PF02311 AraC-like ligand binding domain VCSRO96_2845 PF00596 Class II Aldolase and Adducin N-terminal domain VCSRO96_2847 PF12852 Cupin VCSRO96_2847 PF12833 Helix-turn-helix domain VCSRO96_2849 PF12706 Beta-lactamase superfamily domain VCSRO96_2850 PF13737 Transposase DDE domain VCSRO96_2854 PF10688 Bacterial inner membrane protein VCSRO96_2856 PF01614 Bacterial transcriptional regulator VCSRO96_2856 PF09339 IclR helix-turn-helix domain VCSRO96_2857 PF00571 CBS domain VCSRO96_2861 PF00271 Helicase conserved C-terminal domain VCSRO96_2861 PF00270 DEAD/DEAH box helicase VCSRO96_2862 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCSRO96_2863 PF02540 NAD synthase VCSRO96_2864 PF01467 Cytidylyltransferase-like VCSRO96_2865 PF11849 Domain of unknown function (DUF3369) VCSRO96_2866 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_2866 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_2866 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_2868 PF03553 Na+/H+ antiporter family VCSRO96_2869 PF07690 Major Facilitator Superfamily VCSRO96_2871 PF08448 PAS fold VCSRO96_2871 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_2872 PF00657 GDSL-like Lipase/Acylhydrolase VCSRO96_2873 PF07968 Leukocidin/Hemolysin toxin family VCSRO96_2873 PF12563 Hemolytic toxin N terminal VCSRO96_2873 PF16458 Beta-prism lectin VCSRO96_2874 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_2874 PF00672 HAMP domain VCSRO96_2874 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2875 PF00561 alpha/beta hydrolase fold VCSRO96_2876 PF00561 alpha/beta hydrolase fold VCSRO96_2877 PF03280 Proteobacterial lipase chaperone protein VCSRO96_2878 PF05547 Immune inhibitor A peptidase M6 VCSRO96_2878 PF00801 PKD domain VCSRO96_2882 PF01032 FecCD transport family VCSRO96_2883 PF01032 FecCD transport family VCSRO96_2884 PF00005 ABC transporter VCSRO96_2885 PF12833 Helix-turn-helix domain VCSRO96_2886 PF00593 TonB dependent receptor VCSRO96_2886 PF07715 TonB-dependent Receptor Plug Domain VCSRO96_2888 PF00871 Acetokinase family VCSRO96_2896 PF12801 4Fe-4S binding domain VCSRO96_2900 PF11756 Nitrous oxide-stimulated promoter VCSRO96_2901 PF00127 Copper binding proteins, plastocyanin/azurin family VCSRO96_2902 PF01590 GAF domain VCSRO96_2902 PF00158 Sigma-54 interaction domain VCSRO96_2903 PF00258 Flavodoxin VCSRO96_2903 PF00753 Metallo-beta-lactamase superfamily VCSRO96_2903 PF00301 Rubredoxin VCSRO96_2904 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_2904 PF18113 Rubredoxin binding C-terminal domain VCSRO96_2906 PF00672 HAMP domain VCSRO96_2906 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2906 PF17202 Single cache domain 3 VCSRO96_2908 PF04405 Domain of Unknown function (DUF542) VCSRO96_2908 PF01814 Hemerythrin HHE cation binding domain VCSRO96_2909 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_2909 PF00072 Response regulator receiver domain VCSRO96_2910 PF00672 HAMP domain VCSRO96_2910 PF07730 Histidine kinase VCSRO96_2910 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VCSRO96_2910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_2911 PF07690 Major Facilitator Superfamily VCSRO96_2912 PF01568 Molydopterin dinucleotide binding domain VCSRO96_2912 PF14710 Respiratory nitrate reductase alpha N-terminal VCSRO96_2912 PF00384 Molybdopterin oxidoreductase VCSRO96_2913 PF13247 4Fe-4S dicluster domain VCSRO96_2913 PF14711 Respiratory nitrate reductase beta C-terminal VCSRO96_2914 PF02613 Nitrate reductase delta subunit VCSRO96_2915 PF02665 Nitrate reductase gamma subunit VCSRO96_2922 PF11799 impB/mucB/samB family C-terminal domain VCSRO96_2922 PF13438 Domain of unknown function (DUF4113) VCSRO96_2922 PF00817 impB/mucB/samB family VCSRO96_2930 PF13808 DDE_Tnp_1-associated VCSRO96_2930 PF01609 Transposase DDE domain VCSRO96_2931 PF01609 Transposase DDE domain VCSRO96_2931 PF13808 DDE_Tnp_1-associated VCSRO96_2932 PF00005 ABC transporter VCSRO96_2933 PF13276 HTH-like domain VCSRO96_2933 PF00665 Integrase core domain VCSRO96_2933 PF13333 Integrase core domain VCSRO96_2936 PF07804 HipA-like C-terminal domain VCSRO96_2936 PF13657 HipA N-terminal domain VCSRO96_2937 PF00672 HAMP domain VCSRO96_2937 PF02743 Cache domain VCSRO96_2937 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2942 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_2942 PF00672 HAMP domain VCSRO96_2942 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_2943 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_2943 PF00072 Response regulator receiver domain VCSRO96_2945 PF01261 Xylose isomerase-like TIM barrel VCSRO96_2946 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VCSRO96_2948 PF00596 Class II Aldolase and Adducin N-terminal domain VCSRO96_2949 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO96_2950 PF03611 PTS system sugar-specific permease component VCSRO96_2951 PF08220 DeoR-like helix-turn-helix domain VCSRO96_2951 PF00455 DeoR C terminal sensor domain VCSRO96_2956 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_2956 PF00072 Response regulator receiver domain VCSRO96_2957 PF13426 PAS domain VCSRO96_2957 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_2957 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_2957 PF00672 HAMP domain VCSRO96_2957 PF14827 Double sensory domain of two-component sensor kinase VCSRO96_2960 PF00873 AcrB/AcrD/AcrF family VCSRO96_2965 PF00672 HAMP domain VCSRO96_2965 PF02743 Cache domain VCSRO96_2965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_2966 PF00282 Pyridoxal-dependent decarboxylase conserved domain VCSRO96_2967 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO96_2967 PF07943 Penicillin-binding protein 5, C-terminal domain VCSRO96_2970 PF00194 Eukaryotic-type carbonic anhydrase VCSRO96_2972 PF02347 Glycine cleavage system P-protein VCSRO96_2973 PF01597 Glycine cleavage H-protein VCSRO96_2974 PF00464 Serine hydroxymethyltransferase VCSRO96_2976 PF01571 Aminomethyltransferase folate-binding domain VCSRO96_2976 PF08669 Glycine cleavage T-protein C-terminal barrel domain VCSRO96_2977 PF03129 Anticodon binding domain VCSRO96_2977 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VCSRO96_2977 PF02824 TGS domain VCSRO96_2977 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCSRO96_2978 PF05198 Translation initiation factor IF-3, N-terminal domain VCSRO96_2978 PF00707 Translation initiation factor IF-3, C-terminal domain VCSRO96_2979 PF01632 Ribosomal protein L35 VCSRO96_2980 PF00453 Ribosomal protein L20 VCSRO96_2981 PF13495 Phage integrase, N-terminal SAM-like domain VCSRO96_2981 PF00589 Phage integrase family VCSRO96_2985 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VCSRO96_2987 PF01609 Transposase DDE domain VCSRO96_2987 PF13808 DDE_Tnp_1-associated VCSRO96_2989 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB VCSRO96_2990 PF01381 Helix-turn-helix VCSRO96_2994 PF08212 Lipocalin-like domain VCSRO96_3018 PF08212 Lipocalin-like domain VCSRO96_3019 PF13808 DDE_Tnp_1-associated VCSRO96_3019 PF01609 Transposase DDE domain VCSRO96_3032 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ VCSRO96_3034 PF13302 Acetyltransferase (GNAT) domain VCSRO96_3042 PF13333 Integrase core domain VCSRO96_3042 PF00665 Integrase core domain VCSRO96_3042 PF13276 HTH-like domain VCSRO96_3044 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system VCSRO96_3045 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA VCSRO96_3048 PF00583 Acetyltransferase (GNAT) family VCSRO96_3050 PF13302 Acetyltransferase (GNAT) domain VCSRO96_3056 PF01797 Transposase IS200 like VCSRO96_3063 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system VCSRO96_3064 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA VCSRO96_3068 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VCSRO96_3070 PF01609 Transposase DDE domain VCSRO96_3070 PF13808 DDE_Tnp_1-associated VCSRO96_3078 PF01966 HD domain VCSRO96_3088 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB VCSRO96_3089 PF01381 Helix-turn-helix VCSRO96_3106 PF01527 Transposase VCSRO96_3107 PF00665 Integrase core domain VCSRO96_3113 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH VCSRO96_3119 PF13333 Integrase core domain VCSRO96_3119 PF00665 Integrase core domain VCSRO96_3119 PF13276 HTH-like domain VCSRO96_3121 PF00293 NUDIX domain VCSRO96_3127 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VCSRO96_3129 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB VCSRO96_3130 PF01381 Helix-turn-helix VCSRO96_3134 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VCSRO96_3136 PF13597 Anaerobic ribonucleoside-triphosphate reductase VCSRO96_3136 PF03477 ATP cone domain VCSRO96_3138 PF00155 Aminotransferase class I and II VCSRO96_3139 PF08443 RimK-like ATP-grasp domain VCSRO96_3139 PF18030 RimK PreATP-grasp domain VCSRO96_3140 PF02378 Phosphotransferase system, EIIC VCSRO96_3140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO96_3141 PF00294 pfkB family carbohydrate kinase VCSRO96_3142 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO96_3142 PF00381 PTS HPr component phosphorylation site VCSRO96_3143 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO96_3143 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_3144 PF00149 Calcineurin-like phosphoesterase VCSRO96_3144 PF12320 Type 5 capsule protein repressor C-terminal domain VCSRO96_3145 PF13476 AAA domain VCSRO96_3146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3146 PF00072 Response regulator receiver domain VCSRO96_3147 PF00155 Aminotransferase class I and II VCSRO96_3149 PF00654 Voltage gated chloride channel VCSRO96_3150 PF07683 Cobalamin synthesis protein cobW C-terminal domain VCSRO96_3150 PF02492 CobW/HypB/UreG, nucleotide-binding domain VCSRO96_3151 PF01926 50S ribosome-binding GTPase VCSRO96_3152 PF02705 K+ potassium transporter VCSRO96_3153 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VCSRO96_3153 PF10371 Domain of unknown function VCSRO96_3153 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VCSRO96_3153 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VCSRO96_3153 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCSRO96_3154 PF02702 Osmosensitive K+ channel His kinase sensor domain VCSRO96_3154 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_3154 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3154 PF13493 Domain of unknown function (DUF4118) VCSRO96_3155 PF00072 Response regulator receiver domain VCSRO96_3155 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_3156 PF02416 mttA/Hcf106 family VCSRO96_3157 PF09335 SNARE associated Golgi protein VCSRO96_3159 PF00563 EAL domain VCSRO96_3159 PF10388 EAL-domain associated signalling protein domain VCSRO96_3161 PF01292 Prokaryotic cytochrome b561 VCSRO96_3162 PF04264 YceI-like domain VCSRO96_3163 PF01226 Formate/nitrite transporter VCSRO96_3164 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3164 PF03466 LysR substrate binding domain VCSRO96_3165 PF06496 Protein of unknown function (DUF1097) VCSRO96_3166 PF11398 Protein of unknown function (DUF2813) VCSRO96_3167 PF02872 5'-nucleotidase, C-terminal domain VCSRO96_3167 PF00149 Calcineurin-like phosphoesterase VCSRO96_3168 PF03741 Integral membrane protein TerC family VCSRO96_3170 PF01797 Transposase IS200 like VCSRO96_3171 PF08274 PhnA Zinc-Ribbon VCSRO96_3171 PF03831 PhnA domain VCSRO96_3177 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3177 PF08448 PAS fold VCSRO96_3181 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3181 PF05230 MASE2 domain VCSRO96_3184 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VCSRO96_3184 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VCSRO96_3184 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VCSRO96_3185 PF02233 NAD(P) transhydrogenase beta subunit VCSRO96_3187 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_3187 PF00072 Response regulator receiver domain VCSRO96_3190 PF03701 Uncharacterised protein family (UPF0181) VCSRO96_3191 PF01253 Translation initiation factor SUI1 VCSRO96_3193 PF07478 D-ala D-ala ligase C-terminus VCSRO96_3193 PF01820 D-ala D-ala ligase N-terminus VCSRO96_3195 PF00583 Acetyltransferase (GNAT) family VCSRO96_3195 PF13380 CoA binding domain VCSRO96_3195 PF13607 Succinyl-CoA ligase like flavodoxin domain VCSRO96_3196 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3196 PF03466 LysR substrate binding domain VCSRO96_3197 PF07715 TonB-dependent Receptor Plug Domain VCSRO96_3197 PF00593 TonB dependent receptor VCSRO96_3198 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO96_3198 PF12793 Sugar transport-related sRNA regulator N-term VCSRO96_3200 PF03061 Thioesterase superfamily VCSRO96_3204 PF02798 Glutathione S-transferase, N-terminal domain VCSRO96_3204 PF00043 Glutathione S-transferase, C-terminal domain VCSRO96_3207 PF03479 Plants and Prokaryotes Conserved (PCC) domain VCSRO96_3207 PF12804 MobA-like NTP transferase domain VCSRO96_3207 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_3208 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_3208 PF00005 ABC transporter VCSRO96_3209 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3209 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO96_3210 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3211 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCSRO96_3216 PF00854 POT family VCSRO96_3218 PF00392 Bacterial regulatory proteins, gntR family VCSRO96_3218 PF07702 UTRA domain VCSRO96_3219 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3220 PF00005 ABC transporter VCSRO96_3222 PF00266 Aminotransferase class-V VCSRO96_3223 PF00202 Aminotransferase class-III VCSRO96_3224 PF13419 Haloacid dehalogenase-like hydrolase VCSRO96_3225 PF01272 Transcription elongation factor, GreA/GreB, C-term VCSRO96_3225 PF14760 Rnk N-terminus VCSRO96_3226 PF00128 Alpha amylase, catalytic domain VCSRO96_3226 PF00686 Starch binding domain VCSRO96_3227 PF03459 TOBE domain VCSRO96_3227 PF17912 MalK OB fold domain VCSRO96_3227 PF00005 ABC transporter VCSRO96_3229 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_3229 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VCSRO96_3232 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3233 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3234 PF16657 Maltogenic Amylase, C-terminal domain VCSRO96_3234 PF02903 Alpha amylase, N-terminal ig-like domain VCSRO96_3234 PF00128 Alpha amylase, catalytic domain VCSRO96_3237 PF13419 Haloacid dehalogenase-like hydrolase VCSRO96_3240 PF01741 Large-conductance mechanosensitive channel, MscL VCSRO96_3241 PF01268 Formate--tetrahydrofolate ligase VCSRO96_3242 PF01625 Peptide methionine sulfoxide reductase VCSRO96_3242 PF01641 SelR domain VCSRO96_3243 PF01227 GTP cyclohydrolase I VCSRO96_3244 PF03454 MoeA C-terminal region (domain IV) VCSRO96_3244 PF03453 MoeA N-terminal region (domain I and II) VCSRO96_3244 PF00994 Probable molybdopterin binding domain VCSRO96_3245 PF00899 ThiF family VCSRO96_3247 PF00581 Rhodanese-like domain VCSRO96_3248 PF08329 Chitinase A, N-terminal domain VCSRO96_3248 PF00704 Glycosyl hydrolases family 18 VCSRO96_3249 PF04198 Putative sugar-binding domain VCSRO96_3250 PF00923 Transaldolase/Fructose-6-phosphate aldolase VCSRO96_3251 PF00456 Transketolase, thiamine diphosphate binding domain VCSRO96_3251 PF02779 Transketolase, pyrimidine binding domain VCSRO96_3251 PF02780 Transketolase, C-terminal domain VCSRO96_3257 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCSRO96_3257 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCSRO96_3260 PF06942 GlpM protein VCSRO96_3262 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3262 PF03466 LysR substrate binding domain VCSRO96_3264 PF03992 Antibiotic biosynthesis monooxygenase VCSRO96_3265 PF00881 Nitroreductase family VCSRO96_3266 PF00873 AcrB/AcrD/AcrF family VCSRO96_3269 PF04143 Sulphur transport VCSRO96_3272 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCSRO96_3272 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCSRO96_3282 PF00367 phosphotransferase system, EIIB VCSRO96_3282 PF02378 Phosphotransferase system, EIIC VCSRO96_3283 PF00356 Bacterial regulatory proteins, lacI family VCSRO96_3284 PF08244 Glycosyl hydrolases family 32 C terminal VCSRO96_3284 PF00251 Glycosyl hydrolases family 32 N-terminal domain VCSRO96_3285 PF00294 pfkB family carbohydrate kinase VCSRO96_3286 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VCSRO96_3286 PF01266 FAD dependent oxidoreductase VCSRO96_3287 PF00672 HAMP domain VCSRO96_3287 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3287 PF17200 Single Cache domain 2 VCSRO96_3288 PF00691 OmpA family VCSRO96_3288 PF13488 Glycine zipper VCSRO96_3289 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCSRO96_3289 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCSRO96_3290 PF13419 Haloacid dehalogenase-like hydrolase VCSRO96_3292 PF00672 HAMP domain VCSRO96_3292 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3292 PF17200 Single Cache domain 2 VCSRO96_3293 PF03606 C4-dicarboxylate anaerobic carrier VCSRO96_3294 PF03315 Serine dehydratase beta chain VCSRO96_3294 PF03313 Serine dehydratase alpha chain VCSRO96_3295 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_3295 PF00072 Response regulator receiver domain VCSRO96_3296 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VCSRO96_3296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3296 PF00672 HAMP domain VCSRO96_3296 PF07730 Histidine kinase VCSRO96_3297 PF12838 4Fe-4S dicluster domain VCSRO96_3297 PF13187 4Fe-4S dicluster domain VCSRO96_3299 PF00384 Molybdopterin oxidoreductase VCSRO96_3299 PF01568 Molydopterin dinucleotide binding domain VCSRO96_3299 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCSRO96_3300 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VCSRO96_3301 PF03264 NapC/NirT cytochrome c family, N-terminal region VCSRO96_3303 PF01966 HD domain VCSRO96_3304 PF00072 Response regulator receiver domain VCSRO96_3304 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_3305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3305 PF05231 MASE1 VCSRO96_3305 PF07730 Histidine kinase VCSRO96_3306 PF07690 Major Facilitator Superfamily VCSRO96_3308 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3309 PF08402 TOBE domain VCSRO96_3309 PF00005 ABC transporter VCSRO96_3310 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VCSRO96_3312 PF00108 Thiolase, N-terminal domain VCSRO96_3312 PF02803 Thiolase, C-terminal domain VCSRO96_3313 PF00106 short chain dehydrogenase VCSRO96_3314 PF07549 SecD/SecF GG Motif VCSRO96_3314 PF02355 Protein export membrane protein VCSRO96_3315 PF13721 SecD export protein N-terminal TM region VCSRO96_3315 PF07549 SecD/SecF GG Motif VCSRO96_3315 PF02355 Protein export membrane protein VCSRO96_3318 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3319 PF00483 Nucleotidyl transferase VCSRO96_3320 PF06483 Chitinase C VCSRO96_3320 PF00704 Glycosyl hydrolases family 18 VCSRO96_3321 PF00465 Iron-containing alcohol dehydrogenase VCSRO96_3323 PF02954 Bacterial regulatory protein, Fis family VCSRO96_3323 PF00072 Response regulator receiver domain VCSRO96_3323 PF14532 Sigma-54 interaction domain VCSRO96_3324 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_3324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3324 PF02743 Cache domain VCSRO96_3327 PF07690 Major Facilitator Superfamily VCSRO96_3328 PF00224 Pyruvate kinase, barrel domain VCSRO96_3328 PF02887 Pyruvate kinase, alpha/beta domain VCSRO96_3329 PF01627 Hpt domain VCSRO96_3329 PF00072 Response regulator receiver domain VCSRO96_3329 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_3329 PF00672 HAMP domain VCSRO96_3329 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCSRO96_3331 PF02142 MGS-like domain VCSRO96_3332 PF00857 Isochorismatase family VCSRO96_3333 PF01219 Prokaryotic diacylglycerol kinase VCSRO96_3334 PF12462 DNA helicase IV / RNA helicase N terminal VCSRO96_3334 PF00580 UvrD/REP helicase N-terminal domain VCSRO96_3334 PF13361 UvrD-like helicase C-terminal domain VCSRO96_3335 PF12805 FUSC-like inner membrane protein yccS VCSRO96_3336 PF00072 Response regulator receiver domain VCSRO96_3336 PF13188 PAS domain VCSRO96_3336 PF08448 PAS fold VCSRO96_3336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3336 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_3343 PF00005 ABC transporter VCSRO96_3343 PF03459 TOBE domain VCSRO96_3344 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3346 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VCSRO96_3346 PF07685 CobB/CobQ-like glutamine amidotransferase domain VCSRO96_3355 PF00072 Response regulator receiver domain VCSRO96_3355 PF09308 LuxQ, periplasmic VCSRO96_3355 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_3355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3356 PF13407 Periplasmic binding protein domain VCSRO96_3358 PF01541 GIY-YIG catalytic domain VCSRO96_3359 PF04337 Protein of unknown function, DUF480 VCSRO96_3361 PF04363 Protein of unknown function (DUF496) VCSRO96_3364 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VCSRO96_3364 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VCSRO96_3365 PF00230 Major intrinsic protein VCSRO96_3366 PF04324 BFD-like [2Fe-2S] binding domain VCSRO96_3366 PF01266 FAD dependent oxidoreductase VCSRO96_3367 PF00890 FAD binding domain VCSRO96_3368 PF02754 Cysteine-rich domain VCSRO96_3368 PF13183 4Fe-4S dicluster domain VCSRO96_3369 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VCSRO96_3369 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCSRO96_3370 PF00085 Thioredoxin VCSRO96_3371 PF07690 Major Facilitator Superfamily VCSRO96_3375 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3376 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3377 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_3378 PF00005 ABC transporter VCSRO96_3380 PF05762 VWA domain containing CoxE-like protein VCSRO96_3381 PF17868 AAA lid domain VCSRO96_3381 PF07728 AAA domain (dynein-related subfamily) VCSRO96_3381 PF12592 Protein of unknown function (DUF3763) VCSRO96_3382 PF00293 NUDIX domain VCSRO96_3383 PF13006 Insertion element 4 transposase N-terminal VCSRO96_3383 PF01609 Transposase DDE domain VCSRO96_3384 PF01212 Beta-eliminating lyase VCSRO96_3385 PF00034 Cytochrome c VCSRO96_3386 PF08361 MAATS-type transcriptional repressor, C-terminal region VCSRO96_3386 PF00440 Bacterial regulatory proteins, tetR family VCSRO96_3387 PF00270 DEAD/DEAH box helicase VCSRO96_3387 PF00271 Helicase conserved C-terminal domain VCSRO96_3388 PF04336 Acyl carrier protein phosphodiesterase VCSRO96_3390 PF03222 Tryptophan/tyrosine permease family VCSRO96_3391 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3391 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_3391 PF00672 HAMP domain VCSRO96_3392 PF16363 GDP-mannose 4,6 dehydratase VCSRO96_3393 PF03746 LamB/YcsF family VCSRO96_3395 PF02626 Carboxyltransferase domain, subdomain A and B VCSRO96_3397 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VCSRO96_3397 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VCSRO96_3399 PF00005 ABC transporter VCSRO96_3400 PF13472 GDSL-like Lipase/Acylhydrolase family VCSRO96_3401 PF12241 Trans-2-enoyl-CoA reductase catalytic region VCSRO96_3401 PF07055 Enoyl reductase FAD binding domain VCSRO96_3401 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VCSRO96_3402 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3402 PF00498 FHA domain VCSRO96_3402 PF00563 EAL domain VCSRO96_3404 PF00684 DnaJ central domain VCSRO96_3404 PF01556 DnaJ C terminal domain VCSRO96_3404 PF00226 DnaJ domain VCSRO96_3406 PF01527 Transposase VCSRO96_3407 PF00665 Integrase core domain VCSRO96_3409 PF00665 Integrase core domain VCSRO96_3409 PF13333 Integrase core domain VCSRO96_3409 PF13276 HTH-like domain VCSRO96_3413 PF01609 Transposase DDE domain VCSRO96_3413 PF13808 DDE_Tnp_1-associated VCSRO96_3414 PF01609 Transposase DDE domain VCSRO96_3414 PF13808 DDE_Tnp_1-associated VCSRO96_3416 PF09722 Protein of unknown function (DUF2384) VCSRO96_3421 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VCSRO96_3427 PF01966 HD domain VCSRO96_3432 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system VCSRO96_3433 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system VCSRO96_3434 PF13276 HTH-like domain VCSRO96_3434 PF00665 Integrase core domain VCSRO96_3434 PF13333 Integrase core domain VCSRO96_3438 PF13276 HTH-like domain VCSRO96_3438 PF00665 Integrase core domain VCSRO96_3438 PF13333 Integrase core domain VCSRO96_3440 PF02796 Helix-turn-helix domain of resolvase VCSRO96_3440 PF00239 Resolvase, N terminal domain VCSRO96_3442 PF13419 Haloacid dehalogenase-like hydrolase VCSRO96_3445 PF00294 pfkB family carbohydrate kinase VCSRO96_3447 PF00271 Helicase conserved C-terminal domain VCSRO96_3447 PF00270 DEAD/DEAH box helicase VCSRO96_3447 PF03880 DbpA RNA binding domain VCSRO96_3448 PF08206 Ribonuclease B OB domain VCSRO96_3448 PF00773 RNB domain VCSRO96_3448 PF00575 S1 RNA binding domain VCSRO96_3450 PF12849 PBP superfamily domain VCSRO96_3451 PF01575 MaoC like domain VCSRO96_3452 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VCSRO96_3453 PF18416 N-acetylglucosamine binding protein domain 2 VCSRO96_3453 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VCSRO96_3454 PF01447 Thermolysin metallopeptidase, catalytic domain VCSRO96_3454 PF07504 Fungalysin/Thermolysin Propeptide Motif VCSRO96_3454 PF03413 Peptidase propeptide and YPEB domain VCSRO96_3454 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO96_3454 PF02868 Thermolysin metallopeptidase, alpha-helical domain VCSRO96_3455 PF04389 Peptidase family M28 VCSRO96_3455 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO96_3456 PF00491 Arginase family VCSRO96_3457 PF17810 Arginine decarboxylase helical bundle domain VCSRO96_3457 PF17944 Arginine decarboxylase C-terminal helical extension VCSRO96_3457 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VCSRO96_3459 PF03448 MgtE intracellular N domain VCSRO96_3459 PF00571 CBS domain VCSRO96_3459 PF01769 Divalent cation transporter VCSRO96_3460 PF00166 Chaperonin 10 Kd subunit VCSRO96_3461 PF00118 TCP-1/cpn60 chaperonin family VCSRO96_3463 PF00696 Amino acid kinase family VCSRO96_3463 PF13840 ACT domain VCSRO96_3464 PF06339 Ectoine synthase VCSRO96_3465 PF00202 Aminotransferase class-III VCSRO96_3466 PF00583 Acetyltransferase (GNAT) family VCSRO96_3467 PF01329 Pterin 4 alpha carbinolamine dehydratase VCSRO96_3468 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VCSRO96_3469 PF00501 AMP-binding enzyme VCSRO96_3469 PF13193 AMP-binding enzyme C-terminal domain VCSRO96_3473 PF08241 Methyltransferase domain VCSRO96_3474 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3474 PF03466 LysR substrate binding domain VCSRO96_3476 PF00892 EamA-like transporter family VCSRO96_3477 PF14602 Hexapeptide repeat of succinyl-transferase VCSRO96_3477 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VCSRO96_3477 PF00132 Bacterial transferase hexapeptide (six repeats) VCSRO96_3478 PF00571 CBS domain VCSRO96_3478 PF01595 Cyclin M transmembrane N-terminal domain VCSRO96_3478 PF03471 Transporter associated domain VCSRO96_3479 PF02566 OsmC-like protein VCSRO96_3480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCSRO96_3481 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCSRO96_3481 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCSRO96_3484 PF13520 Amino acid permease VCSRO96_3485 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3487 PF00248 Aldo/keto reductase family VCSRO96_3488 PF00128 Alpha amylase, catalytic domain VCSRO96_3489 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCSRO96_3490 PF12262 Bacterial virulence factor lipase N-terminal VCSRO96_3491 PF13426 PAS domain VCSRO96_3491 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3491 PF08447 PAS fold VCSRO96_3492 PF03413 Peptidase propeptide and YPEB domain VCSRO96_3492 PF01447 Thermolysin metallopeptidase, catalytic domain VCSRO96_3492 PF07504 Fungalysin/Thermolysin Propeptide Motif VCSRO96_3492 PF04151 Bacterial pre-peptidase C-terminal domain VCSRO96_3492 PF02868 Thermolysin metallopeptidase, alpha-helical domain VCSRO96_3493 PF03922 OmpW family VCSRO96_3496 PF00768 D-alanyl-D-alanine carboxypeptidase VCSRO96_3497 PF00155 Aminotransferase class I and II VCSRO96_3497 PF00392 Bacterial regulatory proteins, gntR family VCSRO96_3498 PF01654 Cytochrome bd terminal oxidase subunit I VCSRO96_3499 PF02322 Cytochrome bd terminal oxidase subunit II VCSRO96_3502 PF00291 Pyridoxal-phosphate dependent enzyme VCSRO96_3503 PF03466 LysR substrate binding domain VCSRO96_3503 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3506 PF00145 C-5 cytosine-specific DNA methylase VCSRO96_3509 PF13276 HTH-like domain VCSRO96_3509 PF00665 Integrase core domain VCSRO96_3509 PF13333 Integrase core domain VCSRO96_3510 PF13006 Insertion element 4 transposase N-terminal VCSRO96_3510 PF01609 Transposase DDE domain VCSRO96_3511 PF00107 Zinc-binding dehydrogenase VCSRO96_3511 PF08240 Alcohol dehydrogenase GroES-like domain VCSRO96_3512 PF00155 Aminotransferase class I and II VCSRO96_3513 PF01053 Cys/Met metabolism PLP-dependent enzyme VCSRO96_3514 PF03466 LysR substrate binding domain VCSRO96_3514 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCSRO96_3520 PF01966 HD domain VCSRO96_3521 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VCSRO96_3521 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VCSRO96_3522 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VCSRO96_3523 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VCSRO96_3523 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VCSRO96_3528 PF02595 Glycerate kinase family VCSRO96_3529 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3529 PF00672 HAMP domain VCSRO96_3530 PF01243 Pyridoxamine 5'-phosphate oxidase VCSRO96_3531 PF06228 Haem utilisation ChuX/HutX VCSRO96_3532 PF04055 Radical SAM superfamily VCSRO96_3533 PF03544 Gram-negative bacterial TonB protein C-terminal VCSRO96_3534 PF01618 MotA/TolQ/ExbB proton channel family VCSRO96_3535 PF02472 Biopolymer transport protein ExbD/TolR VCSRO96_3536 PF01497 Periplasmic binding protein VCSRO96_3537 PF01032 FecCD transport family VCSRO96_3538 PF00005 ABC transporter VCSRO96_3544 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3544 PF00672 HAMP domain VCSRO96_3544 PF02743 Cache domain VCSRO96_3545 PF03473 MOSC domain VCSRO96_3545 PF03476 MOSC N-terminal beta barrel domain VCSRO96_3545 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO96_3545 PF03476 MOSC N-terminal beta barrel domain VCSRO96_3545 PF03473 MOSC domain VCSRO96_3545 PF00111 2Fe-2S iron-sulfur cluster binding domain VCSRO96_3546 PF01979 Amidohydrolase family VCSRO96_3548 PF05656 Protein of unknown function (DUF805) VCSRO96_3550 PF05958 tRNA (Uracil-5-)-methyltransferase VCSRO96_3551 PF05661 Protein of unknown function (DUF808) VCSRO96_3553 PF00313 'Cold-shock' DNA-binding domain VCSRO96_3558 PF08448 PAS fold VCSRO96_3558 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3559 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3559 PF08448 PAS fold VCSRO96_3560 PF08220 DeoR-like helix-turn-helix domain VCSRO96_3560 PF00455 DeoR C terminal sensor domain VCSRO96_3563 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3564 PF14785 Maltose transport system permease protein MalF P2 domain VCSRO96_3564 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3565 PF01547 Bacterial extracellular solute-binding protein VCSRO96_3566 PF08402 TOBE domain VCSRO96_3566 PF00005 ABC transporter VCSRO96_3567 PF13302 Acetyltransferase (GNAT) domain VCSRO96_3570 PF01906 Putative heavy-metal-binding VCSRO96_3571 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_3573 PF00072 Response regulator receiver domain VCSRO96_3573 PF01584 CheW-like domain VCSRO96_3574 PF01047 MarR family VCSRO96_3575 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3578 PF00563 EAL domain VCSRO96_3578 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3578 PF03707 Bacterial signalling protein N terminal repeat VCSRO96_3582 PF03466 LysR substrate binding domain VCSRO96_3582 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3583 PF00990 Diguanylate cyclase, GGDEF domain VCSRO96_3583 PF00563 EAL domain VCSRO96_3585 PF05726 Pirin C-terminal cupin domain VCSRO96_3585 PF02678 Pirin VCSRO96_3586 PF06865 Pyrimidine/purine nucleoside phosphorylase VCSRO96_3588 PF07690 Major Facilitator Superfamily VCSRO96_3589 PF00672 HAMP domain VCSRO96_3589 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3589 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_3590 PF13654 AAA domain VCSRO96_3590 PF05362 Lon protease (S16) C-terminal proteolytic domain VCSRO96_3592 PF00005 ABC transporter VCSRO96_3592 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_3593 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_3594 PF17200 Single Cache domain 2 VCSRO96_3594 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3594 PF00672 HAMP domain VCSRO96_3596 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3596 PF03466 LysR substrate binding domain VCSRO96_3597 PF02652 L-lactate permease VCSRO96_3598 PF01070 FMN-dependent dehydrogenase VCSRO96_3600 PF03618 Kinase/pyrophosphorylase VCSRO96_3601 PF02896 PEP-utilising enzyme, TIM barrel domain VCSRO96_3601 PF00391 PEP-utilising enzyme, mobile domain VCSRO96_3601 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VCSRO96_3602 PF08447 PAS fold VCSRO96_3602 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3603 PF01554 MatE VCSRO96_3604 PF00270 DEAD/DEAH box helicase VCSRO96_3604 PF00271 Helicase conserved C-terminal domain VCSRO96_3605 PF12833 Helix-turn-helix domain VCSRO96_3606 PF02627 Carboxymuconolactone decarboxylase family VCSRO96_3608 PF00664 ABC transporter transmembrane region VCSRO96_3608 PF00005 ABC transporter VCSRO96_3610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCSRO96_3612 PF01810 LysE type translocator VCSRO96_3613 PF12833 Helix-turn-helix domain VCSRO96_3616 PF01557 Fumarylacetoacetate (FAA) hydrolase family VCSRO96_3617 PF01047 MarR family VCSRO96_3618 PF02566 OsmC-like protein VCSRO96_3619 PF13609 Gram-negative porin VCSRO96_3620 PF00892 EamA-like transporter family VCSRO96_3621 PF00462 Glutaredoxin VCSRO96_3622 PF07670 Nucleoside recognition VCSRO96_3623 PF07670 Nucleoside recognition VCSRO96_3624 PF03600 Citrate transporter VCSRO96_3626 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VCSRO96_3626 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VCSRO96_3627 PF06029 AlkA N-terminal domain VCSRO96_3627 PF00730 HhH-GPD superfamily base excision DNA repair protein VCSRO96_3628 PF07681 DoxX VCSRO96_3629 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3629 PF03466 LysR substrate binding domain VCSRO96_3633 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VCSRO96_3635 PF07148 Maltose operon periplasmic protein precursor (MalM) VCSRO96_3636 PF02264 LamB porin VCSRO96_3637 PF00128 Alpha amylase, catalytic domain VCSRO96_3637 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VCSRO96_3639 PF12729 Four helix bundle sensory module for signal transduction VCSRO96_3639 PF00672 HAMP domain VCSRO96_3639 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3641 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3641 PF00672 HAMP domain VCSRO96_3643 PF00793 DAHP synthetase I family VCSRO96_3644 PF00005 ABC transporter VCSRO96_3645 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3646 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCSRO96_3647 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3648 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCSRO96_3648 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCSRO96_3648 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCSRO96_3648 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCSRO96_3649 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCSRO96_3649 PF02378 Phosphotransferase system, EIIC VCSRO96_3649 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCSRO96_3650 PF01232 Mannitol dehydrogenase Rossmann domain VCSRO96_3650 PF08125 Mannitol dehydrogenase C-terminal domain VCSRO96_3651 PF05068 Mannitol repressor VCSRO96_3652 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCSRO96_3658 PF13460 NAD(P)H-binding VCSRO96_3659 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3659 PF03466 LysR substrate binding domain VCSRO96_3660 PF02743 Cache domain VCSRO96_3660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3660 PF00672 HAMP domain VCSRO96_3661 PF00106 short chain dehydrogenase VCSRO96_3662 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCSRO96_3662 PF03466 LysR substrate binding domain VCSRO96_3663 PF04013 Putative SAM-dependent RNA methyltransferase VCSRO96_3664 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VCSRO96_3665 PF13520 Amino acid permease VCSRO96_3666 PF01276 Orn/Lys/Arg decarboxylase, major domain VCSRO96_3666 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VCSRO96_3666 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VCSRO96_3667 PF00171 Aldehyde dehydrogenase family VCSRO96_3668 PF01037 Lrp/AsnC ligand binding domain VCSRO96_3669 PF02743 Cache domain VCSRO96_3669 PF00672 HAMP domain VCSRO96_3669 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3671 PF00474 Sodium:solute symporter family VCSRO96_3673 PF00171 Aldehyde dehydrogenase family VCSRO96_3673 PF01619 Proline dehydrogenase VCSRO96_3673 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VCSRO96_3673 PF14850 DNA-binding domain of Proline dehydrogenase VCSRO96_3674 PF12833 Helix-turn-helix domain VCSRO96_3676 PF03781 Sulfatase-modifying factor enzyme 1 VCSRO96_3677 PF00072 Response regulator receiver domain VCSRO96_3677 PF00196 Bacterial regulatory proteins, luxR family VCSRO96_3678 PF01243 Pyridoxamine 5'-phosphate oxidase VCSRO96_3678 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VCSRO96_3679 PF00529 HlyD membrane-fusion protein of T1SS VCSRO96_3682 PF00005 ABC transporter VCSRO96_3682 PF00664 ABC transporter transmembrane region VCSRO96_3682 PF03412 Peptidase C39 family VCSRO96_3684 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_3684 PF00072 Response regulator receiver domain VCSRO96_3686 PF02743 Cache domain VCSRO96_3686 PF00672 HAMP domain VCSRO96_3686 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3687 PF01339 CheB methylesterase VCSRO96_3687 PF00072 Response regulator receiver domain VCSRO96_3688 PF03975 CheD chemotactic sensory transduction VCSRO96_3689 PF01739 CheR methyltransferase, SAM binding domain VCSRO96_3689 PF03705 CheR methyltransferase, all-alpha domain VCSRO96_3690 PF02203 Tar ligand binding domain homologue VCSRO96_3690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VCSRO96_3690 PF00672 HAMP domain VCSRO96_3692 PF01584 CheW-like domain VCSRO96_3693 PF01584 CheW-like domain VCSRO96_3694 PF01584 CheW-like domain VCSRO96_3694 PF09078 CheY binding VCSRO96_3694 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO96_3694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3694 PF01627 Hpt domain VCSRO96_3695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3695 PF01627 Hpt domain VCSRO96_3695 PF02895 Signal transducing histidine kinase, homodimeric domain VCSRO96_3695 PF01584 CheW-like domain VCSRO96_3696 PF00072 Response regulator receiver domain VCSRO96_3699 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3700 PF00528 Binding-protein-dependent transport system inner membrane component VCSRO96_3700 PF12911 N-terminal TM domain of oligopeptide transport permease C VCSRO96_3701 PF00005 ABC transporter VCSRO96_3701 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCSRO96_3702 PF08019 Phosphoethanolamine transferase EptA/EptB VCSRO96_3702 PF00884 Sulfatase VCSRO96_3703 PF00512 His Kinase A (phospho-acceptor) domain VCSRO96_3703 PF08521 Two-component sensor kinase N-terminal VCSRO96_3703 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCSRO96_3704 PF00486 Transcriptional regulatory protein, C terminal VCSRO96_3704 PF00072 Response regulator receiver domain VCSRO96_3709 PF13193 AMP-binding enzyme C-terminal domain VCSRO96_3709 PF00501 AMP-binding enzyme VCSRO96_3712 PF13718 GNAT acetyltransferase 2 VCSRO96_3712 PF05127 Helicase VCSRO96_3713 PF13416 Bacterial extracellular solute-binding protein VCSRO96_3714 PF08775 ParB family VCSRO96_3714 PF02195 ParB-like nuclease domain VCSRO96_3715 PF13614 AAA domain VCSRO96_3715 PF18607 ParA helix turn helix domain