locus-tag	class	description
VCSRO207_0001	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VCSRO207_0002	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
VCSRO207_0003	COG0706	membrane insertase activity
VCSRO207_0004	COG0594	ribonuclease P activity
VCSRO207_0005	COG1126	abc transporter atp-binding protein
VCSRO207_0008	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
VCSRO207_0009	COG0592	DNA-directed DNA polymerase activity
VCSRO207_0010	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
VCSRO207_0011	COG0187	DNA topoisomerase II activity
VCSRO207_0014	COG0071	Belongs to the small heat shock protein (HSP20) family
VCSRO207_0015	COG3977	Valine--pyruvate aminotransferase
VCSRO207_0016	COG0751	glycine-tRNA ligase activity
VCSRO207_0017	COG0752	glycyl-tRNA synthetase alpha subunit
VCSRO207_0018	COG2119	membrane
VCSRO207_0020	COG0425	Belongs to the sulfur carrier protein TusA family
VCSRO207_0022	COG0604	alcohol dehydrogenase
VCSRO207_0024	COG0129	dihydroxy-acid dehydratase activity
VCSRO207_0025	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VCSRO207_0028	COG0606	chelatase, subunit chli
VCSRO207_0029	COG0204	Acyl-transferase
VCSRO207_0030	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VCSRO207_0031	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
VCSRO207_0033	COG3084	Protein conserved in bacteria
VCSRO207_0034	COG4326	sporulation control protein
VCSRO207_0035	COG1272	protein, Hemolysin III
VCSRO207_0037	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VCSRO207_0038	COG0569	domain protein
VCSRO207_0039	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VCSRO207_0039	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VCSRO207_0041	COG0242	peptide deformylase activity
VCSRO207_0042	COG1652	LysM domain
VCSRO207_0043	COG0758	DNA mediated transformation
VCSRO207_0044	COG2922	Belongs to the Smg family
VCSRO207_0045	COG0551	DNA topoisomerase type I activity
VCSRO207_0046	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
VCSRO207_0047	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
VCSRO207_0048	COG0009	L-threonylcarbamoyladenylate synthase
VCSRO207_0049	COG0408	coproporphyrinogen oxidase activity
VCSRO207_0050	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
VCSRO207_0052	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
VCSRO207_0059	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
VCSRO207_0060	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
VCSRO207_0062	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VCSRO207_0063	COG2104	thiamine diphosphate biosynthetic process
VCSRO207_0064	COG2022	thiamine diphosphate biosynthetic process
VCSRO207_0065	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
VCSRO207_0066	COG0006	proline dipeptidase activity
VCSRO207_0066	COG0006	proline dipeptidase activity
VCSRO207_0070	COG1522	sequence-specific DNA binding
VCSRO207_0071	COG5001	Diguanylate cyclase
VCSRO207_0071	COG5002	protein histidine kinase activity
VCSRO207_0075	COG0589	response to stress
VCSRO207_0076	COG1528	Iron-storage protein
VCSRO207_0078	COG2081	HI0933 family
VCSRO207_0080	COG1322	Protein conserved in bacteria
VCSRO207_0081	COG2226	methyltransferase
VCSRO207_0084	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
VCSRO207_0085	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
VCSRO207_0086	COG0805	protein transport
VCSRO207_0087	COG1858	cytochrome C peroxidase
VCSRO207_0088	COG0534	Mate efflux family protein
VCSRO207_0090	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
VCSRO207_0091	COG2937	Belongs to the GPAT DAPAT family
VCSRO207_0092	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
VCSRO207_0093	COG3161	chorismate lyase activity
VCSRO207_0094	COG1580	Controls the rotational direction of flagella during chemotaxis
VCSRO207_0097	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VCSRO207_0098	COG0084	hydrolase, TatD family'
VCSRO207_0101	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VCSRO207_0101	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VCSRO207_0105	COG3078	GTPase activator activity
VCSRO207_0108	COG3071	HemY protein
VCSRO207_0109	COG2959	enzyme of heme biosynthesis
VCSRO207_0110	COG1587	Uroporphyrinogen-III synthase
VCSRO207_0111	COG0181	hydroxymethylbilane synthase activity
VCSRO207_0113	COG1965	Belongs to the frataxin family
VCSRO207_0114	COG0019	diaminopimelate decarboxylase activity
VCSRO207_0115	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
VCSRO207_0117	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
VCSRO207_0118	COG1011	Hydrolase
VCSRO207_0119	COG3287	FIST C domain
VCSRO207_0119	COG2199	diguanylate cyclase activity
VCSRO207_0119	COG2200	EAL domain
VCSRO207_0122	COG0561	phosphatase activity
VCSRO207_0123	COG2267	carboxylic ester hydrolase activity
VCSRO207_0124	COG1280	lysine exporter protein (LysE YggA)
VCSRO207_0125	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VCSRO207_0126	COG0783	Belongs to the Dps family
VCSRO207_0131	COG0742	ribosomal rna small subunit methyltransferase
VCSRO207_0132	COG0552	protein localization to endoplasmic reticulum
VCSRO207_0133	COG2884	Cell division ATP-binding protein ftsE
VCSRO207_0134	COG2177	Part of the ABC transporter FtsEX involved in
VCSRO207_0135	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VCSRO207_0136	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VCSRO207_0139	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
VCSRO207_0140	COG4206	TonB-dependent receptor
VCSRO207_0141	COG1404	Belongs to the peptidase S8 family
VCSRO207_0142	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
VCSRO207_0156	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
VCSRO207_0157	COG5001	Diguanylate cyclase
VCSRO207_0157	COG3300	MHYT domain
VCSRO207_0159	COG3852	Histidine kinase
VCSRO207_0161	COG0174	glutamine synthetase
VCSRO207_0163	COG1217	gtp-binding protein TYPA
VCSRO207_0165	COG1295	ribonuclease BN
VCSRO207_0166	COG1490	D-aminoacyl-tRNA deacylase activity
VCSRO207_0167	COG0456	acetyltransferase
VCSRO207_0169	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
VCSRO207_0170	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
VCSRO207_0171	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
VCSRO207_0172	COG3031	protein transport across the cell outer membrane
VCSRO207_0174	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VCSRO207_0175	COG1459	type II secretion system
VCSRO207_0176	COG2165	general secretion pathway protein
VCSRO207_0177	COG2165	general secretion pathway protein
VCSRO207_0178	COG2165	general secretion pathway protein
VCSRO207_0179	COG4795	General secretion pathway protein
VCSRO207_0180	COG3156	type II secretion system protein K
VCSRO207_0181	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VCSRO207_0182	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VCSRO207_0184	COG1218	3'(2'),5'-bisphosphate nucleotidase
VCSRO207_0185	COG0494	nUDIX hydrolase
VCSRO207_0187	COG1040	competence protein
VCSRO207_0188	COG0596	Alpha beta hydrolase
VCSRO207_0190	COG2183	response to ionizing radiation
VCSRO207_0191	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VCSRO207_0192	COG2199	diguanylate cyclase activity
VCSRO207_0195	COG2233	PERMEase
VCSRO207_0196	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
VCSRO207_0197	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VCSRO207_0198	COG1758	RNA polymerase activity
VCSRO207_0199	COG0194	GDP metabolic process
VCSRO207_0200	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
VCSRO207_0201	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VCSRO207_0205	COG4232	protein-disulfide reductase activity
VCSRO207_0207	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VCSRO207_0208	COG1027	Aspartate ammonia-lyase
VCSRO207_0209	COG1027	Aspartate ammonia-lyase
VCSRO207_0210	COG3706	GGDEF domain
VCSRO207_0211	COG3030	protein affecting phage T7 exclusion by the F plasmid
VCSRO207_0212	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
VCSRO207_0214	COG2205	protein histidine kinase activity
VCSRO207_0215	COG0745	RESPONSE REGULATOR receiver
VCSRO207_0217	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
VCSRO207_0218	COG0205	6-phosphofructokinase activity
VCSRO207_0219	COG1494	fructose-1,6-bisphosphatase
VCSRO207_0220	COG3074	FtsZ-dependent cytokinesis
VCSRO207_0221	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
VCSRO207_0222	COG0527	aspartate kinase activity
VCSRO207_0222	COG0460	homoserine dehydrogenase
VCSRO207_0223	COG0626	cystathionine gamma-synthase activity
VCSRO207_0224	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
VCSRO207_0225	COG0281	malic enzyme
VCSRO207_0226	COG0254	rRNA binding
VCSRO207_0227	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
VCSRO207_0228	COG1609	Transcriptional regulator
VCSRO207_0229	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VCSRO207_0230	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
VCSRO207_0231	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
VCSRO207_0232	COG1575	Belongs to the MenA family. Type 1 subfamily
VCSRO207_0233	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VCSRO207_0234	COG0534	Mate efflux family protein
VCSRO207_0235	COG0149	triose-phosphate isomerase activity
VCSRO207_0240	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
VCSRO207_0241	COG0459	protein refolding
VCSRO207_0243	COG1509	lysine 2,3-aminomutase activity
VCSRO207_0244	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VCSRO207_0246	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
VCSRO207_0247	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
VCSRO207_0248	COG1053	succinate dehydrogenase
VCSRO207_0249	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
VCSRO207_0250	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VCSRO207_0251	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
VCSRO207_0252	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
VCSRO207_0253	COG1045	serine acetyltransferase
VCSRO207_0255	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
VCSRO207_0256	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
VCSRO207_0257	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
VCSRO207_0258	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VCSRO207_0259	COG0137	argininosuccinate synthase activity
VCSRO207_0260	COG0165	Argininosuccinate lyase
VCSRO207_0262	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VCSRO207_0263	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VCSRO207_0263	COG0678	peroxiredoxin activity
VCSRO207_0265	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
VCSRO207_0271	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
VCSRO207_0272	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
VCSRO207_0274	COG0338	D12 class N6 adenine-specific DNA methyltransferase
VCSRO207_0275	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
VCSRO207_0276	COG0546	phosphoglycolate phosphatase activity
VCSRO207_0277	COG0180	Tryptophanyl-tRNA synthetase
VCSRO207_0281	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
VCSRO207_0283	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VCSRO207_0288	COG3954	Phosphoribulokinase
VCSRO207_0290	COG0429	hydrolase of the alpha beta-hydrolase fold
VCSRO207_0292	COG0488	(ABC) transporter
VCSRO207_0293	COG2249	NAD(P)H dehydrogenase (quinone) activity
VCSRO207_0296	COG1047	Peptidyl-prolyl cis-trans
VCSRO207_0298	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
VCSRO207_0299	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
VCSRO207_0300	COG3083	sulfuric ester hydrolase activity
VCSRO207_0301	COG0557	exoribonuclease II activity
VCSRO207_0302	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VCSRO207_0303	COG0051	transcription antitermination factor activity, RNA binding
VCSRO207_0304	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
VCSRO207_0305	COG0088	Forms part of the polypeptide exit tunnel
VCSRO207_0306	COG0089	rRNA binding
VCSRO207_0307	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
VCSRO207_0308	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
VCSRO207_0309	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
VCSRO207_0310	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
VCSRO207_0311	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
VCSRO207_0312	COG0255	Belongs to the universal ribosomal protein uL29 family
VCSRO207_0313	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
VCSRO207_0314	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
VCSRO207_0315	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
VCSRO207_0316	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
VCSRO207_0317	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
VCSRO207_0318	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
VCSRO207_0319	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
VCSRO207_0320	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
VCSRO207_0321	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
VCSRO207_0322	COG1841	ribosomal large subunit assembly
VCSRO207_0324	COG0201	protein transport
VCSRO207_0325	COG0257	Belongs to the bacterial ribosomal protein bL36 family
VCSRO207_0326	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
VCSRO207_0327	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
VCSRO207_0328	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
VCSRO207_0329	COG0202	RNA polymerase activity
VCSRO207_0330	COG0203	ribosomal protein L17
VCSRO207_0332	COG0545	Peptidyl-prolyl cis-trans isomerase
VCSRO207_0333	COG3266	domain, Protein
VCSRO207_0333	COG3061	Opacity-associated protein A
VCSRO207_0334	COG0697	spore germination
VCSRO207_0335	COG2153	protein acetylation
VCSRO207_0336	COG0513	Belongs to the DEAD box helicase family
VCSRO207_0338	COG0737	Belongs to the 5'-nucleotidase family
VCSRO207_0339	COG1648	precorrin-2 dehydrogenase activity
VCSRO207_0339	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
VCSRO207_0340	COG0175	sulfate reduction
VCSRO207_0341	COG2895	sulfate adenylyltransferase (ATP) activity
VCSRO207_0342	COG0529	Catalyzes the synthesis of activated sulfate
VCSRO207_0346	COG1136	(ABC) transporter
VCSRO207_0349	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
VCSRO207_0350	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VCSRO207_0351	COG0729	surface antigen
VCSRO207_0353	COG2105	PFAM AIG2 family protein
VCSRO207_0354	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
VCSRO207_0356	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VCSRO207_0357	COG0163	prenyltransferase activity
VCSRO207_0359	COG1178	ABC-type Fe3 transport system permease component
VCSRO207_0360	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
VCSRO207_0361	COG3028	Belongs to the UPF0307 family
VCSRO207_0362	COG0312	modulator of DNA gyrase
VCSRO207_0363	COG2239	Acts as a magnesium transporter
VCSRO207_0364	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VCSRO207_0365	COG1660	Displays ATPase and GTPase activities
VCSRO207_0366	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VCSRO207_0367	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VCSRO207_0369	COG1137	ATPase activity
VCSRO207_0370	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
VCSRO207_0373	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
VCSRO207_0373	COG0517	IMP dehydrogenase activity
VCSRO207_0375	COG1127	ABC transporter
VCSRO207_0376	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VCSRO207_0377	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VCSRO207_0378	COG2854	intermembrane phospholipid transfer
VCSRO207_0380	COG5007	Belongs to the BolA IbaG family
VCSRO207_0381	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
VCSRO207_0383	COG0251	oxidation-reduction process
VCSRO207_0385	COG0540	Belongs to the ATCase OTCase family
VCSRO207_0387	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
VCSRO207_0389	COG0564	pseudouridine synthase activity
VCSRO207_0390	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VCSRO207_0391	COG0525	valine-tRNA ligase activity
VCSRO207_0392	COG2927	DNA polymerase III (CHI subunit)
VCSRO207_0393	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VCSRO207_0394	COG0795	lipopolysaccharide-transporting ATPase activity
VCSRO207_0395	COG0795	lipopolysaccharide-transporting ATPase activity
VCSRO207_0398	COG3437	response regulator, receiver
VCSRO207_0406	COG0066	3-isopropylmalate dehydratase activity
VCSRO207_0407	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
VCSRO207_0408	COG0473	3-isopropylmalate dehydrogenase activity
VCSRO207_0412	COG0583	DNA-binding transcription factor activity
VCSRO207_0413	COG1022	Amp-dependent synthetase and ligase
VCSRO207_0414	COG0028	Belongs to the TPP enzyme family
VCSRO207_0415	COG0440	acetolactate synthase activity
VCSRO207_0416	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VCSRO207_0417	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
VCSRO207_0418	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
VCSRO207_0419	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
VCSRO207_0420	COG3079	Belongs to the UPF0149 family
VCSRO207_0421	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VCSRO207_0422	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VCSRO207_0425	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
VCSRO207_0427	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
VCSRO207_0428	COG1595	DNA-templated transcription, initiation
VCSRO207_0431	COG3086	response to oxidative stress
VCSRO207_0432	COG0481	GTPase activity
VCSRO207_0434	COG0571	ribonuclease III activity
VCSRO207_0435	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
VCSRO207_0436	COG1381	Involved in DNA repair and RecF pathway recombination
VCSRO207_0437	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
VCSRO207_0441	COG5001	Diguanylate cyclase
VCSRO207_0444	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VCSRO207_0445	COG3956	TIGRFAM MazG family protein
VCSRO207_0446	COG0504	CTP synthase activity
VCSRO207_0447	COG0148	phosphopyruvate hydratase activity
VCSRO207_0449	COG3409	Peptidoglycan-binding domain 1 protein
VCSRO207_0449	COG3267	Type II secretory pathway component ExeA
VCSRO207_0451	COG4991	sh3 domain protein
VCSRO207_0452	COG0306	phosphate transporter
VCSRO207_0453	COG1392	Phosphate transport regulator
VCSRO207_0454	COG3025	triphosphatase activity
VCSRO207_0456	COG0840	transmembrane signaling receptor activity
VCSRO207_0457	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
VCSRO207_0459	COG1538	Outer membrane efflux protein
VCSRO207_0460	COG0494	nUDIX hydrolase
VCSRO207_0461	COG3151	Protein conserved in bacteria
VCSRO207_0463	COG3150	esterase
VCSRO207_0464	COG0187	DNA topoisomerase II activity
VCSRO207_0465	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
VCSRO207_0467	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
VCSRO207_0468	COG0237	dephospho-CoA kinase activity
VCSRO207_0470	COG1459	type II secretion system
VCSRO207_0471	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VCSRO207_0475	COG0716	FMN binding
VCSRO207_0476	COG4974	Belongs to the 'phage' integrase family
VCSRO207_0477	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VCSRO207_0478	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
VCSRO207_0479	COG2186	Transcriptional regulator
VCSRO207_0480	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
VCSRO207_0481	COG0508	dehydrogenase complex catalyzes the overall conversion of
VCSRO207_0482	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VCSRO207_0484	COG3116	cell division
VCSRO207_0485	COG0768	penicillin binding
VCSRO207_0486	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
VCSRO207_0487	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
VCSRO207_0489	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
VCSRO207_0490	COG0772	Belongs to the SEDS family
VCSRO207_0491	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
VCSRO207_0492	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VCSRO207_0493	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
VCSRO207_0494	COG0849	cell division
VCSRO207_0495	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
VCSRO207_0496	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
VCSRO207_0498	COG0653	protein targeting
VCSRO207_0499	COG0494	nUDIX hydrolase
VCSRO207_0500	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
VCSRO207_0502	COG0505	Belongs to the CarA family
VCSRO207_0503	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VCSRO207_0507	COG0730	response to heat
VCSRO207_0508	COG0583	DNA-binding transcription factor activity
VCSRO207_0509	COG2860	membrane
VCSRO207_0510	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
VCSRO207_0512	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
VCSRO207_0514	COG0493	'glutamate synthase
VCSRO207_0515	COG0067	glutamate synthase
VCSRO207_0515	COG0069	glutamate synthase activity
VCSRO207_0515	COG0070	glutamate synthase
VCSRO207_0517	COG0070	glutamate synthase
VCSRO207_0517	COG0067	glutamate synthase
VCSRO207_0517	COG0069	glutamate synthase activity
VCSRO207_0518	COG1242	4 iron, 4 sulfur cluster binding
VCSRO207_0519	COG2203	Gaf domain
VCSRO207_0519	COG3706	GGDEF domain
VCSRO207_0519	COG4251	negative regulation of phosphorylation
VCSRO207_0519	COG5001	Diguanylate cyclase
VCSRO207_0520	COG0784	Response regulator, receiver
VCSRO207_0520	COG2198	Histidine kinase
VCSRO207_0520	COG5002	protein histidine kinase activity
VCSRO207_0521	COG0745	RESPONSE REGULATOR receiver
VCSRO207_0523	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VCSRO207_0526	COG0083	homoserine kinase activity
VCSRO207_0527	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
VCSRO207_0528	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
VCSRO207_0529	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
VCSRO207_0530	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
VCSRO207_0533	COG1115	amino acid carrier protein
VCSRO207_0534	COG3022	response to hydroperoxide
VCSRO207_0536	COG0084	hydrolase, TatD family'
VCSRO207_0537	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VCSRO207_0538	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
VCSRO207_0539	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
VCSRO207_0540	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
VCSRO207_0541	COG0813	purine-nucleoside phosphorylase activity
VCSRO207_0543	COG0560	Phosphoserine phosphatase
VCSRO207_0545	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
VCSRO207_0546	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VCSRO207_0547	COG1022	Amp-dependent synthetase and ligase
VCSRO207_0550	COG3250	beta-galactosidase activity
VCSRO207_0551	COG1609	Transcriptional regulator
VCSRO207_0552	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VCSRO207_0555	COG0569	domain protein
VCSRO207_0555	COG0189	ligase activity
VCSRO207_0557	COG0456	acetyltransferase
VCSRO207_0559	COG2171	N-acyltransferase activity
VCSRO207_0560	COG3141	response to X-ray
VCSRO207_0563	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
VCSRO207_0564	COG1074	ATP-dependent DNA helicase activity
VCSRO207_0565	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
VCSRO207_0567	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VCSRO207_0567	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VCSRO207_0568	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VCSRO207_0568	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VCSRO207_0570	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
VCSRO207_0571	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
VCSRO207_0572	COG2166	iron-sulfur cluster assembly
VCSRO207_0573	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VCSRO207_0574	COG0693	protein deglycase activity
VCSRO207_0575	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
VCSRO207_0576	COG3248	Nucleoside-binding outer membrane protein
VCSRO207_0578	COG1595	DNA-templated transcription, initiation
VCSRO207_0580	COG2211	Major facilitator Superfamily
VCSRO207_0581	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VCSRO207_0583	COG2813	Specifically methylates the guanine in position
VCSRO207_0584	COG0271	Belongs to the BolA IbaG family
VCSRO207_0585	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VCSRO207_0586	COG1805	sodium ion transport
VCSRO207_0587	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VCSRO207_0588	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VCSRO207_0589	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VCSRO207_0590	COG2871	sodium ion transport
VCSRO207_0591	COG1477	protein flavinylation
VCSRO207_0595	COG3706	GGDEF domain
VCSRO207_0596	COG0733	neurotransmitter:sodium symporter activity
VCSRO207_0598	COG0189	ligase activity
VCSRO207_0599	COG4067	protein conserved in archaea
VCSRO207_0599	COG0189	ligase activity
VCSRO207_0600	COG2195	Cleaves the N-terminal amino acid of tripeptides
VCSRO207_0601	COG2252	PERMEase
VCSRO207_0602	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
VCSRO207_0603	COG1073	alpha beta
VCSRO207_0605	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
VCSRO207_0606	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
VCSRO207_0607	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
VCSRO207_0608	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VCSRO207_0608	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VCSRO207_0611	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
VCSRO207_0612	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VCSRO207_0613	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
VCSRO207_0614	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
VCSRO207_0616	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
VCSRO207_0617	COG0024	Methionine aminopeptidase
VCSRO207_0618	COG0052	Belongs to the universal ribosomal protein uS2 family
VCSRO207_0619	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
VCSRO207_0620	COG0528	UMP kinase activity
VCSRO207_0621	COG0233	cytoplasmic translational termination
VCSRO207_0622	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
VCSRO207_0623	COG0575	Belongs to the CDS family
VCSRO207_0624	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
VCSRO207_0625	COG0750	zinc metalloprotease
VCSRO207_0627	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
VCSRO207_0628	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VCSRO207_0629	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VCSRO207_0630	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VCSRO207_0631	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VCSRO207_0632	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
VCSRO207_0633	COG0587	DNA-directed DNA polymerase activity
VCSRO207_0634	COG0825	malonyl-CoA metabolic process
VCSRO207_0635	COG0037	tRNA processing
VCSRO207_0637	COG3479	Phenolic acid decarboxylase
VCSRO207_0638	COG0347	Belongs to the P(II) protein family
VCSRO207_0639	COG3021	interspecies interaction between organisms
VCSRO207_0640	COG0741	lytic transglycosylase activity
VCSRO207_0640	COG1388	LysM domain
VCSRO207_0641	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VCSRO207_0642	COG2226	methyltransferase
VCSRO207_0643	COG0328	RNA-DNA hybrid ribonuclease activity
VCSRO207_0648	COG3220	belongs to the UPF0276 family
VCSRO207_0652	COG1294	oxidase, subunit
VCSRO207_0654	COG1960	acyl-CoA dehydrogenase activity
VCSRO207_0655	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VCSRO207_0656	COG0121	glutamine amidotransferase
VCSRO207_0657	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
VCSRO207_0658	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
VCSRO207_0659	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
VCSRO207_0661	COG1187	pseudouridine synthase activity
VCSRO207_0662	COG2840	Smr protein MutS2
VCSRO207_0665	COG3735	TraB family
VCSRO207_0668	COG2217	Heavy metal translocating P-type atpase
VCSRO207_0668	COG2608	mercury ion transmembrane transporter activity
VCSRO207_0669	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VCSRO207_0672	COG1629	transport
VCSRO207_0672	COG4774	siderophore transport
VCSRO207_0673	COG2375	cellular response to nickel ion
VCSRO207_0681	COG0784	Response regulator, receiver
VCSRO207_0681	COG0835	chemotaxis
VCSRO207_0682	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
VCSRO207_0683	COG1815	bacterial-type flagellum-dependent cell motility
VCSRO207_0686	COG1749	Flagellar hook protein flgE
VCSRO207_0687	COG4787	bacterial-type flagellum-dependent cell motility
VCSRO207_0689	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
VCSRO207_0690	COG1706	bacterial-type flagellum-dependent cell motility
VCSRO207_0691	COG3951	Flagellar rod assembly protein muramidase FlgJ
VCSRO207_0691	COG1705	Flagellar rod assembly protein muramidase FlgJ
VCSRO207_0694	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VCSRO207_0695	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VCSRO207_0712	COG0012	GTP binding
VCSRO207_0713	COG0193	aminoacyl-tRNA hydrolase activity
VCSRO207_0714	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
VCSRO207_0715	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
VCSRO207_0716	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
VCSRO207_0717	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
VCSRO207_0718	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
VCSRO207_0719	COG2890	protein-(glutamine-N5) methyltransferase activity
VCSRO207_0721	COG2912	Transglutaminase-like superfamily
VCSRO207_0722	COG2877	3-deoxy-8-phosphooctulonate synthase activity
VCSRO207_0723	COG0737	Belongs to the 5'-nucleotidase family
VCSRO207_0724	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
VCSRO207_0725	COG2233	PERMEase
VCSRO207_0729	COG1393	Belongs to the ArsC family
VCSRO207_0730	COG4783	chaperone-mediated protein folding
VCSRO207_0734	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VCSRO207_0737	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
VCSRO207_0739	COG1876	peptidase activity
VCSRO207_0741	COG1393	Belongs to the ArsC family
VCSRO207_0745	COG2837	iron assimilation
VCSRO207_0746	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VCSRO207_0747	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VCSRO207_0748	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VCSRO207_0749	COG1334	flagellar protein FlaG
VCSRO207_0750	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
VCSRO207_0752	COG1516	flagellar protein fliS
VCSRO207_0756	COG1677	Flagellar hook-basal body complex protein FliE
VCSRO207_0758	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
VCSRO207_0759	COG1317	bacterial-type flagellum organization
VCSRO207_0763	COG1580	Controls the rotational direction of flagella during chemotaxis
VCSRO207_0768	COG1987	bacterial-type flagellum assembly
VCSRO207_0769	COG1684	flagellar biosynthetic protein fliR
VCSRO207_0771	COG2840	Smr protein MutS2
VCSRO207_0772	COG2890	protein-(glutamine-N5) methyltransferase activity
VCSRO207_0773	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
VCSRO207_0774	COG2860	membrane
VCSRO207_0775	COG3101	peptidyl-lysine hydroxylation
VCSRO207_0777	COG0431	NADPH-dependent FMN reductase
VCSRO207_0778	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VCSRO207_0778	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
VCSRO207_0779	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VCSRO207_0780	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VCSRO207_0781	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VCSRO207_0782	COG0735	belongs to the Fur family
VCSRO207_0784	COG0583	DNA-binding transcription factor activity
VCSRO207_0786	COG1346	cytolysis
VCSRO207_0789	COG0596	Alpha beta hydrolase
VCSRO207_0790	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
VCSRO207_0791	COG0033	Phosphoglucomutase
VCSRO207_0793	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
VCSRO207_0794	COG0372	Belongs to the citrate synthase family
VCSRO207_0795	COG2009	succinate dehydrogenase
VCSRO207_0796	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
VCSRO207_0797	COG1053	succinate dehydrogenase
VCSRO207_0799	COG0567	Dehydrogenase, E1 component
VCSRO207_0800	COG0508	dehydrogenase complex catalyzes the overall conversion of
VCSRO207_0801	COG0045	succinate-CoA ligase (ADP-forming) activity
VCSRO207_0803	COG1108	ABC-type Mn2 Zn2 transport systems permease components
VCSRO207_0804	COG1121	(ABC) transporter
VCSRO207_0805	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
VCSRO207_0806	COG4977	sequence-specific DNA binding
VCSRO207_0807	COG1918	ferrous iron import across plasma membrane
VCSRO207_0811	COG0018	arginyl-trna synthetase
VCSRO207_0813	COG1025	Belongs to the peptidase M16 family
VCSRO207_0814	COG2062	phosphohistidine phosphatase, SixA
VCSRO207_0820	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
VCSRO207_0821	COG0643	Histidine kinase
VCSRO207_0821	COG2198	Histidine kinase
VCSRO207_0821	COG0784	Response regulator, receiver
VCSRO207_0822	COG2201	protein-glutamate methylesterase activity
VCSRO207_0823	COG1192	Involved in chromosome partitioning
VCSRO207_0825	COG0835	chemotaxis
VCSRO207_0827	COG4133	protoheme IX ABC transporter activity
VCSRO207_0828	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VCSRO207_0829	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VCSRO207_0831	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
VCSRO207_0832	COG1138	Cytochrome C-type biogenesis protein
VCSRO207_0833	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VCSRO207_0834	COG4235	cytochrome complex assembly
VCSRO207_0834	COG3088	subunit of a heme lyase
VCSRO207_0836	COG2853	Lipoprotein
VCSRO207_0840	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
VCSRO207_0841	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VCSRO207_0842	COG0123	including yeast histone deacetylase and acetoin utilization protein
VCSRO207_0845	COG3083	sulfuric ester hydrolase activity
VCSRO207_0846	COG3082	Protein of unknown function (DUF1414)
VCSRO207_0847	COG3081	Nucleoid-associated protein
VCSRO207_0849	COG1757	Na H antiporter
VCSRO207_0850	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VCSRO207_0851	COG2095	MarC family integral membrane protein
VCSRO207_0852	COG1012	belongs to the aldehyde dehydrogenase family
VCSRO207_0852	COG1454	alcohol dehydrogenase
VCSRO207_0854	COG0659	secondary active sulfate transmembrane transporter activity
VCSRO207_0855	COG1530	ribonuclease E activity
VCSRO207_0856	COG0564	pseudouridine synthase activity
VCSRO207_0857	COG0424	maF-like protein
VCSRO207_0858	COG1399	metal-binding, possibly nucleic acid-binding protein
VCSRO207_0859	COG0333	Belongs to the bacterial ribosomal protein bL32 family
VCSRO207_0860	COG0416	fatty acid biosynthetic process
VCSRO207_0861	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VCSRO207_0863	COG1028	Short-chain dehydrogenase reductase Sdr
VCSRO207_0864	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
VCSRO207_0865	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VCSRO207_0866	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VCSRO207_0867	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
VCSRO207_0868	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
VCSRO207_0870	COG0084	hydrolase, TatD family'
VCSRO207_0871	COG1263	PTS System
VCSRO207_0871	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VCSRO207_0873	COG0733	neurotransmitter:sodium symporter activity
VCSRO207_0876	COG4667	esterase of the alpha-beta hydrolase superfamily
VCSRO207_0878	COG1940	carbohydrate kinase activity
VCSRO207_0879	COG0784	Response regulator, receiver
VCSRO207_0879	COG0835	chemotaxis
VCSRO207_0882	COG2226	methyltransferase
VCSRO207_0884	COG0676	glucose-6-phosphate 1-epimerase activity
VCSRO207_0885	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VCSRO207_0886	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VCSRO207_0888	COG3139	Protein of unknown function (DUF1315)
VCSRO207_0889	COG0252	asparaginase activity
VCSRO207_0890	COG0616	signal peptide processing
VCSRO207_0891	COG0446	pyridine nucleotide-disulphide oxidoreductase
VCSRO207_0891	COG1902	pentaerythritol trinitrate reductase activity
VCSRO207_0892	COG0788	formyltetrahydrofolate deformylase activity
VCSRO207_0894	COG1199	ATP-dependent helicase activity
VCSRO207_0895	COG1214	PFAM Peptidase M22, glycoprotease
VCSRO207_0898	COG0596	Alpha beta hydrolase
VCSRO207_0899	COG0318	PFAM AMP-dependent synthetase and ligase
VCSRO207_0900	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
VCSRO207_0904	COG0232	Belongs to the dGTPase family. Type 2 subfamily
VCSRO207_0905	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
VCSRO207_0906	COG0436	Aminotransferase
VCSRO207_0907	COG1169	isochorismate synthase
VCSRO207_0908	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
VCSRO207_0909	COG0596	Alpha beta hydrolase
VCSRO207_0913	COG3135	benzoate transporter
VCSRO207_0919	COG3015	lipoprotein NlpE involved in copper resistance
VCSRO207_0920	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
VCSRO207_0921	COG2894	cell division
VCSRO207_0922	COG0850	regulation of cytokinetic process
VCSRO207_0923	COG3100	YcgL domain-containing protein
VCSRO207_0924	COG2951	lytic endotransglycosylase activity
VCSRO207_0926	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VCSRO207_0927	COG3005	denitrification pathway
VCSRO207_0928	COG0243	molybdopterin cofactor binding
VCSRO207_0932	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VCSRO207_0935	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
VCSRO207_0943	COG4589	Belongs to the CDS family
VCSRO207_0948	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
VCSRO207_0949	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VCSRO207_0950	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VCSRO207_0951	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VCSRO207_0953	COG4191	Histidine kinase
VCSRO207_0954	COG0544	peptidyl-prolyl cis-trans isomerase activity
VCSRO207_0956	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
VCSRO207_0957	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
VCSRO207_0958	COG0776	regulation of translation
VCSRO207_0959	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VCSRO207_0960	COG1555	photosystem II stabilization
VCSRO207_0961	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
VCSRO207_0962	COG0539	negative regulation of cytoplasmic translation
VCSRO207_0963	COG0776	regulation of translation
VCSRO207_0964	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
VCSRO207_0965	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
VCSRO207_0969	COG0583	DNA-binding transcription factor activity
VCSRO207_0971	COG0686	Belongs to the AlaDH PNT family
VCSRO207_0973	COG1674	ftsk spoiiie
VCSRO207_0974	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
VCSRO207_0975	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VCSRO207_0976	COG2186	Transcriptional regulator
VCSRO207_0979	COG0537	adenosine 5'-monophosphoramidase activity
VCSRO207_0984	COG3150	esterase
VCSRO207_0985	COG1252	NADH dehydrogenase
VCSRO207_0990	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
VCSRO207_0992	COG4591	ABC-type transport system involved in lipoprotein release permease component
VCSRO207_0993	COG1136	(ABC) transporter
VCSRO207_0994	COG4591	ABC-type transport system involved in lipoprotein release permease component
VCSRO207_0996	COG2333	competence protein COMEC
VCSRO207_0996	COG0658	competence protein
VCSRO207_0997	COG1132	(ABC) transporter
VCSRO207_0998	COG1663	tetraacyldisaccharide 4'-kinase activity
VCSRO207_0999	COG2835	tetraacyldisaccharide 4'-kinase activity
VCSRO207_1000	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
VCSRO207_1001	COG2719	SpoVR family
VCSRO207_1002	COG2718	Belongs to the UPF0229 family
VCSRO207_1003	COG2766	serine protein kinase
VCSRO207_1004	COG3013	Belongs to the UPF0304 family
VCSRO207_1006	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VCSRO207_1007	COG0840	transmembrane signaling receptor activity
VCSRO207_1009	COG1882	Formate acetyltransferase
VCSRO207_1015	COG4160	amino acid transport
VCSRO207_1016	COG0708	Exodeoxyribonuclease III
VCSRO207_1017	COG0840	transmembrane signaling receptor activity
VCSRO207_1020	COG0730	response to heat
VCSRO207_1021	COG1199	ATP-dependent helicase activity
VCSRO207_1022	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VCSRO207_1023	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VCSRO207_1024	COG3012	SEC-C Motif Domain Protein
VCSRO207_1025	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VCSRO207_1026	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VCSRO207_1027	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VCSRO207_1028	COG0215	cysteine-tRNA ligase activity
VCSRO207_1029	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
VCSRO207_1030	COG0632	four-way junction helicase activity
VCSRO207_1033	COG1271	oxidase subunit
VCSRO207_1034	COG1294	oxidase, subunit
VCSRO207_1035	COG4890	Cyd operon protein YbgT
VCSRO207_1036	COG0824	Thioesterase
VCSRO207_1037	COG0811	peptide transport
VCSRO207_1040	COG0823	Involved in the tonB-independent uptake of proteins
VCSRO207_1041	COG2885	chlorophyll binding
VCSRO207_1043	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
VCSRO207_1045	COG5002	protein histidine kinase activity
VCSRO207_1045	COG0784	Response regulator, receiver
VCSRO207_1047	COG1012	belongs to the aldehyde dehydrogenase family
VCSRO207_1048	COG3284	Transcriptional regulator
VCSRO207_1049	COG4628	conserved protein (DUF2132)
VCSRO207_1051	COG0415	Belongs to the DNA photolyase family
VCSRO207_1058	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VCSRO207_1060	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VCSRO207_1060	COG3008	intermembrane lipid transfer
VCSRO207_1061	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VCSRO207_1061	COG3008	intermembrane lipid transfer
VCSRO207_1062	COG2995	paraquat-inducible protein a
VCSRO207_1063	COG1309	transcriptional regulator
VCSRO207_1065	COG1012	belongs to the aldehyde dehydrogenase family
VCSRO207_1069	COG1960	acyl-CoA dehydrogenase activity
VCSRO207_1070	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VCSRO207_1071	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
VCSRO207_1072	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
VCSRO207_1073	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
VCSRO207_1076	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VCSRO207_1077	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VCSRO207_1078	COG0297	glycogen (starch) synthase activity
VCSRO207_1082	COG3070	regulator of competence-specific genes
VCSRO207_1083	COG1609	Transcriptional regulator
VCSRO207_1085	COG0745	RESPONSE REGULATOR receiver
VCSRO207_1086	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VCSRO207_1087	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VCSRO207_1088	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
VCSRO207_1089	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
VCSRO207_1093	COG1032	radical SAM domain protein
VCSRO207_1094	COG5001	Diguanylate cyclase
VCSRO207_1095	COG0612	Peptidase, M16
VCSRO207_1098	COG0583	DNA-binding transcription factor activity
VCSRO207_1099	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
VCSRO207_1101	COG2350	Protein conserved in bacteria
VCSRO207_1102	COG1607	acyl-coa hydrolase
VCSRO207_1105	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VCSRO207_1106	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VCSRO207_1108	COG2116	formate transmembrane transporter activity
VCSRO207_1109	COG4459	periplasmic nitrate reductase
VCSRO207_1110	COG3005	denitrification pathway
VCSRO207_1111	COG0243	molybdopterin cofactor binding
VCSRO207_1115	COG1227	inorganic diphosphatase activity
VCSRO207_1119	COG4172	Belongs to the ABC transporter superfamily
VCSRO207_1122	COG4168	peptide transport system, permease
VCSRO207_1124	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
VCSRO207_1125	COG1842	Phage shock protein A
VCSRO207_1128	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VCSRO207_1131	COG2818	Glycosylase
VCSRO207_1132	COG0626	cystathionine gamma-synthase activity
VCSRO207_1134	COG0733	neurotransmitter:sodium symporter activity
VCSRO207_1138	COG0564	pseudouridine synthase activity
VCSRO207_1139	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
VCSRO207_1140	COG4136	ATPase activity
VCSRO207_1141	COG4135	transport system, permease component
VCSRO207_1142	COG4134	Bacterial extracellular solute-binding protein
VCSRO207_1144	COG3313	Fe-S protein
VCSRO207_1146	COG0814	amino acid
VCSRO207_1148	COG2239	Acts as a magnesium transporter
VCSRO207_1150	COG2205	protein histidine kinase activity
VCSRO207_1150	COG0784	Response regulator, receiver
VCSRO207_1153	COG4934	collagen metabolic process
VCSRO207_1160	COG0840	transmembrane signaling receptor activity
VCSRO207_1162	COG2203	Gaf domain
VCSRO207_1162	COG3706	GGDEF domain
VCSRO207_1162	COG4251	negative regulation of phosphorylation
VCSRO207_1162	COG5001	Diguanylate cyclase
VCSRO207_1163	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
VCSRO207_1167	COG1061	Type III restriction enzyme res subunit
VCSRO207_1168	COG1187	pseudouridine synthase activity
VCSRO207_1169	COG2814	Major facilitator Superfamily
VCSRO207_1171	COG0702	epimerase
VCSRO207_1172	COG0534	Mate efflux family protein
VCSRO207_1173	COG4181	ATPase activity
VCSRO207_1174	COG0577	efflux transmembrane transporter activity
VCSRO207_1176	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VCSRO207_1178	COG1748	Saccharopine dehydrogenase
VCSRO207_1181	COG1538	Outer membrane efflux protein
VCSRO207_1185	COG0583	DNA-binding transcription factor activity
VCSRO207_1187	COG1451	nucleotide metabolic process
VCSRO207_1190	COG3063	Type IV pilus biogenesis stability protein PilW
VCSRO207_1191	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
VCSRO207_1195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VCSRO207_1198	COG3290	protein histidine kinase activity
VCSRO207_1199	COG4565	transcriptional regulatory protein
VCSRO207_1201	COG0835	chemotaxis
VCSRO207_1201	COG0784	Response regulator, receiver
VCSRO207_1209	COG1085	galactose-1-phosphate uridylyltransferase
VCSRO207_1210	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
VCSRO207_1211	COG2017	converts alpha-aldose to the beta-anomer
VCSRO207_1213	COG2199	diguanylate cyclase activity
VCSRO207_1213	COG2200	EAL domain
VCSRO207_1216	COG3527	Alpha-acetolactate decarboxylase
VCSRO207_1218	COG3064	Membrane
VCSRO207_1220	COG0753	catalase activity
VCSRO207_1224	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
VCSRO207_1229	COG3097	Belongs to the UPF0267 family
VCSRO207_1234	COG1271	oxidase subunit
VCSRO207_1235	COG1294	oxidase, subunit
VCSRO207_1236	COG4591	ABC-type transport system involved in lipoprotein release permease component
VCSRO207_1236	COG1136	(ABC) transporter
VCSRO207_1237	COG0577	efflux transmembrane transporter activity
VCSRO207_1237	COG1136	(ABC) transporter
VCSRO207_1238	COG0577	efflux transmembrane transporter activity
VCSRO207_1238	COG1136	(ABC) transporter
VCSRO207_1243	COG2816	NAD+ diphosphatase activity
VCSRO207_1244	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
VCSRO207_1247	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
VCSRO207_1249	COG2723	6-phospho-beta-galactosidase activity
VCSRO207_1250	COG1609	Transcriptional regulator
VCSRO207_1251	COG0251	oxidation-reduction process
VCSRO207_1252	COG2731	YhcH YjgK YiaL family protein
VCSRO207_1253	COG0584	glycerophosphoryl diester phosphodiesterase
VCSRO207_1254	COG1349	DNA-binding transcription factor activity
VCSRO207_1255	COG3842	ATPase activity
VCSRO207_1256	COG0395	ABC-type sugar transport system, permease component
VCSRO207_1257	COG1175	transmembrane transport
VCSRO207_1260	COG0811	peptide transport
VCSRO207_1261	COG0811	peptide transport
VCSRO207_1262	COG0848	biopolymer transport protein
VCSRO207_1263	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
VCSRO207_1265	COG1793	dna ligase
VCSRO207_1267	COG0534	Mate efflux family protein
VCSRO207_1269	COG3001	Fructosamine kinase
VCSRO207_1271	COG0791	NLP P60 protein
VCSRO207_1272	COG0840	transmembrane signaling receptor activity
VCSRO207_1274	COG3148	PFAM DTW domain containing protein
VCSRO207_1275	COG1940	carbohydrate kinase activity
VCSRO207_1279	COG0746	molybdenum cofactor guanylyltransferase activity
VCSRO207_1280	COG3842	ATPase activity
VCSRO207_1281	COG4662	Binding-protein-dependent transport system inner membrane component
VCSRO207_1283	COG2204	response regulator
VCSRO207_1284	COG3852	Histidine kinase
VCSRO207_1285	COG0488	(ABC) transporter
VCSRO207_1286	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
VCSRO207_1292	COG3383	formate dehydrogenase (NAD+) activity
VCSRO207_1292	COG0243	molybdopterin cofactor binding
VCSRO207_1293	COG0437	4 iron, 4 sulfur cluster binding
VCSRO207_1296	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
VCSRO207_1297	COG1666	GTP binding
VCSRO207_1298	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VCSRO207_1301	COG2996	Protein conserved in bacteria
VCSRO207_1303	COG3008	intermembrane lipid transfer
VCSRO207_1304	COG2995	paraquat-inducible protein a
VCSRO207_1305	COG1132	(ABC) transporter
VCSRO207_1306	COG1956	GAF domain-containing protein
VCSRO207_1307	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
VCSRO207_1310	COG0308	aminopeptidase N
VCSRO207_1312	COG0167	dihydroorotate dehydrogenase activity
VCSRO207_1314	COG0116	Belongs to the methyltransferase superfamily
VCSRO207_1314	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VCSRO207_1316	COG0488	(ABC) transporter
VCSRO207_1319	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VCSRO207_1320	COG1067	ATP-dependent peptidase activity
VCSRO207_1321	COG3120	sequence-specific DNA binding
VCSRO207_1338	COG3064	Membrane
VCSRO207_1338	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
VCSRO207_1338	COG1073	alpha beta
VCSRO207_1339	COG2994	toxin metabolic process
VCSRO207_1344	COG0784	Response regulator, receiver
VCSRO207_1344	COG2205	protein histidine kinase activity
VCSRO207_1347	COG3278	Belongs to the heme-copper respiratory oxidase family
VCSRO207_1350	COG2010	Cytochrome c
VCSRO207_1352	COG2217	Heavy metal translocating P-type atpase
VCSRO207_1355	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VCSRO207_1356	COG0589	response to stress
VCSRO207_1357	COG0037	tRNA processing
VCSRO207_1361	COG3842	ATPase activity
VCSRO207_1363	COG1177	transmembrane transport
VCSRO207_1365	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VCSRO207_1368	COG1115	amino acid carrier protein
VCSRO207_1369	COG1280	lysine exporter protein (LysE YggA)
VCSRO207_1378	COG3501	Rhs element vgr protein
VCSRO207_1380	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
VCSRO207_1381	COG0513	Belongs to the DEAD box helicase family
VCSRO207_1382	COG2076	Multidrug Resistance protein
VCSRO207_1383	COG0415	Belongs to the DNA photolyase family
VCSRO207_1384	COG0477	Major facilitator Superfamily
VCSRO207_1385	COG0583	DNA-binding transcription factor activity
VCSRO207_1386	COG0443	Heat shock 70 kDa protein
VCSRO207_1387	COG0402	S-adenosylhomocysteine deaminase activity
VCSRO207_1390	COG1643	Atp-dependent helicase
VCSRO207_1397	COG0443	Heat shock 70 kDa protein
VCSRO207_1398	COG0443	Heat shock 70 kDa protein
VCSRO207_1399	COG3706	GGDEF domain
VCSRO207_1405	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
VCSRO207_1406	COG0602	queuosine metabolic process
VCSRO207_1408	COG0561	phosphatase activity
VCSRO207_1410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VCSRO207_1411	COG4597	amino acid ABC transporter
VCSRO207_1412	COG0765	amino acid transport
VCSRO207_1413	COG1126	abc transporter atp-binding protein
VCSRO207_1414	COG0670	Belongs to the BI1 family
VCSRO207_1415	COG2920	part of a sulfur-relay system
VCSRO207_1416	COG1254	Belongs to the acylphosphatase family
VCSRO207_1417	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VCSRO207_1418	COG3706	GGDEF domain
VCSRO207_1420	COG3850	Histidine kinase
VCSRO207_1420	COG2205	protein histidine kinase activity
VCSRO207_1420	COG4999	Histidine kinase
VCSRO207_1420	COG3437	response regulator, receiver
VCSRO207_1421	COG3437	response regulator, receiver
VCSRO207_1422	COG0625	glutathione transferase activity
VCSRO207_1424	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
VCSRO207_1426	COG2195	Cleaves the N-terminal amino acid of tripeptides
VCSRO207_1432	COG0372	Belongs to the citrate synthase family
VCSRO207_1433	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
VCSRO207_1438	COG0583	DNA-binding transcription factor activity
VCSRO207_1439	COG4771	TonB-dependent receptor
VCSRO207_1444	COG1129	ABC transporter
VCSRO207_1449	COG0745	RESPONSE REGULATOR receiver
VCSRO207_1450	COG2205	protein histidine kinase activity
VCSRO207_1451	COG3713	MltA-interacting MipA family protein
VCSRO207_1452	COG2990	Protein conserved in bacteria
VCSRO207_1454	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VCSRO207_1454	COG4191	Histidine kinase
VCSRO207_1455	COG0471	metal ion transport
VCSRO207_1457	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VCSRO207_1460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VCSRO207_1462	COG3768	UPF0283 membrane protein
VCSRO207_1463	COG3106	COG3106 Predicted ATPase
VCSRO207_1466	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VCSRO207_1467	COG0494	nUDIX hydrolase
VCSRO207_1468	COG0814	amino acid
VCSRO207_1469	COG1760	l-serine dehydratase
VCSRO207_1470	COG0720	synthase
VCSRO207_1471	COG0840	transmembrane signaling receptor activity
VCSRO207_1472	COG0017	Asparaginyl-tRNA synthetase
VCSRO207_1473	COG0351	phosphomethylpyrimidine kinase
VCSRO207_1474	COG2770	Histidine kinase
VCSRO207_1474	COG3437	response regulator, receiver
VCSRO207_1475	COG1448	Aminotransferase
VCSRO207_1478	COG0840	transmembrane signaling receptor activity
VCSRO207_1479	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
VCSRO207_1480	COG2943	transferase activity, transferring hexosyl groups
VCSRO207_1481	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VCSRO207_1482	COG1846	Transcriptional regulator
VCSRO207_1487	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VCSRO207_1490	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VCSRO207_1491	COG3108	Peptidase M15
VCSRO207_1497	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VCSRO207_1499	COG2814	Major facilitator Superfamily
VCSRO207_1501	COG1054	Belongs to the UPF0176 family
VCSRO207_1503	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VCSRO207_1504	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VCSRO207_1505	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VCSRO207_1511	COG0840	transmembrane signaling receptor activity
VCSRO207_1514	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
VCSRO207_1515	COG4139	cobalamin transport
VCSRO207_1516	COG2988	succinylglutamate desuccinylase activity
VCSRO207_1519	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
VCSRO207_1520	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
VCSRO207_1521	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VCSRO207_1522	COG1823	symporter activity
VCSRO207_1523	COG2925	Exonuclease
VCSRO207_1524	COG1380	Effector of murein hydrolase LrgA
VCSRO207_1525	COG1346	cytolysis
VCSRO207_1529	COG0500	methyltransferase
VCSRO207_1532	COG0776	regulation of translation
VCSRO207_1533	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VCSRO207_1533	COG0072	phenylalanine-tRNA ligase activity
VCSRO207_1534	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
VCSRO207_1535	COG0456	acetyltransferase
VCSRO207_1542	COG0322	excinuclease ABC activity
VCSRO207_1543	COG2197	response regulator
VCSRO207_1544	COG0417	DNA replication proofreading
VCSRO207_1545	COG5001	Diguanylate cyclase
VCSRO207_1547	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VCSRO207_1548	COG3099	Belongs to the UPF0263 family
VCSRO207_1551	COG1228	amidohydrolase
VCSRO207_1552	COG0010	Belongs to the arginase family
VCSRO207_1553	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
VCSRO207_1554	COG2986	histidine ammonia-lyase
VCSRO207_1558	COG0247	lactate metabolic process
VCSRO207_1558	COG0277	FAD linked oxidase domain protein
VCSRO207_1561	COG2885	chlorophyll binding
VCSRO207_1565	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
VCSRO207_1567	COG0281	malic enzyme
VCSRO207_1569	COG2949	membrane
VCSRO207_1570	COG3706	GGDEF domain
VCSRO207_1571	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VCSRO207_1573	COG0492	ferredoxin-NADP+ reductase activity
VCSRO207_1574	COG4988	ABC transporter
VCSRO207_1575	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
VCSRO207_1576	COG1187	pseudouridine synthase activity
VCSRO207_1577	COG0009	L-threonylcarbamoyladenylate synthase
VCSRO207_1578	COG0613	PHP domain protein
VCSRO207_1579	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VCSRO207_1580	COG0512	Glutamine amidotransferase of anthranilate synthase
VCSRO207_1581	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
VCSRO207_1582	COG0135	phosphoribosylanthranilate isomerase activity
VCSRO207_1582	COG0134	indole-3-glycerol-phosphate synthase activity
VCSRO207_1583	COG0133	tryptophan synthase activity
VCSRO207_1584	COG0159	tryptophan synthase activity
VCSRO207_1586	COG1301	dicarboxylic acid transport
VCSRO207_1587	COG1435	thymidine kinase activity
VCSRO207_1588	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
VCSRO207_1589	COG1801	Protein of unknown function DUF72
VCSRO207_1590	COG4106	trans-aconitate 2-methyltransferase activity
VCSRO207_1591	COG0500	methyltransferase
VCSRO207_1592	COG4067	protein conserved in archaea
VCSRO207_1592	COG0189	ligase activity
VCSRO207_1595	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
VCSRO207_1597	COG3852	Histidine kinase
VCSRO207_1600	COG3070	regulator of competence-specific genes
VCSRO207_1602	COG2431	L-lysine efflux transmembrane transporter activity
VCSRO207_1604	COG0076	glutamate decarboxylase activity
VCSRO207_1605	COG1737	Transcriptional regulator
VCSRO207_1606	COG1012	belongs to the aldehyde dehydrogenase family
VCSRO207_1606	COG1454	alcohol dehydrogenase
VCSRO207_1607	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VCSRO207_1608	COG2985	domain, Protein
VCSRO207_1608	COG3273	potassium ion transport
VCSRO207_1609	COG0542	response to heat
VCSRO207_1610	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
VCSRO207_1611	COG1278	Cold shock
VCSRO207_1613	COG1187	pseudouridine synthase activity
VCSRO207_1614	COG0140	phosphoribosyl-ATP diphosphatase activity
VCSRO207_1614	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
VCSRO207_1615	COG0107	imidazoleglycerol-phosphate synthase activity
VCSRO207_1616	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
VCSRO207_1617	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
VCSRO207_1618	COG0131	Imidazoleglycerol-phosphate dehydratase
VCSRO207_1618	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VCSRO207_1619	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VCSRO207_1620	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
VCSRO207_1621	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
VCSRO207_1622	COG1757	Na H antiporter
VCSRO207_1623	COG2916	Histone family protein nucleoid-structuring protein H-NS
VCSRO207_1624	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VCSRO207_1625	COG0482	sulfurtransferase activity
VCSRO207_1626	COG2915	High frequency lysogenization protein hflD homolog
VCSRO207_1627	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
VCSRO207_1629	COG2268	Band 7 protein
VCSRO207_1631	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VCSRO207_1634	COG0300	oxidoreductase activity
VCSRO207_1636	COG0501	Belongs to the peptidase M48B family
VCSRO207_1638	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
VCSRO207_1639	COG2226	methyltransferase
VCSRO207_1640	COG0156	8-amino-7-oxononanoate synthase activity
VCSRO207_1641	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
VCSRO207_1642	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VCSRO207_1643	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
VCSRO207_1644	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
VCSRO207_1645	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
VCSRO207_1646	COG0653	protein targeting
VCSRO207_1647	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VCSRO207_1648	COG2203	Gaf domain
VCSRO207_1648	COG2199	diguanylate cyclase activity
VCSRO207_1650	COG4120	Belongs to the binding-protein-dependent transport system permease family
VCSRO207_1652	COG4628	conserved protein (DUF2132)
VCSRO207_1653	COG3092	negative regulation of chromosome organization
VCSRO207_1654	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VCSRO207_1655	COG0857	belongs to the CobB CobQ family
VCSRO207_1655	COG0280	phosphate acetyltransferase
VCSRO207_1656	COG0435	Glutathione S-transferase
VCSRO207_1657	COG4608	Belongs to the ABC transporter superfamily
VCSRO207_1658	COG0444	Belongs to the ABC transporter superfamily
VCSRO207_1659	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VCSRO207_1660	COG0601	transmembrane transport
VCSRO207_1664	COG2204	response regulator
VCSRO207_1665	COG5001	Diguanylate cyclase
VCSRO207_1665	COG3300	MHYT domain
VCSRO207_1666	COG4191	Histidine kinase
VCSRO207_1667	COG5002	protein histidine kinase activity
VCSRO207_1669	COG2201	protein-glutamate methylesterase activity
VCSRO207_1672	COG0009	L-threonylcarbamoyladenylate synthase
VCSRO207_1675	COG1881	PFAM PEBP family protein
VCSRO207_1680	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VCSRO207_1681	COG0640	Transcriptional regulator
VCSRO207_1682	COG3706	GGDEF domain
VCSRO207_1686	COG1946	Acyl-CoA thioesterase
VCSRO207_1687	COG1522	sequence-specific DNA binding
VCSRO207_1689	COG0616	signal peptide processing
VCSRO207_1690	COG1028	Short-chain dehydrogenase reductase Sdr
VCSRO207_1692	COG2983	Belongs to the UPF0260 family
VCSRO207_1694	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
VCSRO207_1695	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
VCSRO207_1697	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
VCSRO207_1698	COG2832	Protein of unknown function (DUF454)
VCSRO207_1700	COG0745	RESPONSE REGULATOR receiver
VCSRO207_1701	COG0583	DNA-binding transcription factor activity
VCSRO207_1702	COG0778	Nitroreductase
VCSRO207_1703	COG1250	3-hydroxyacyl-CoA dehydrogenase
VCSRO207_1703	COG1024	Enoyl-CoA hydratase
VCSRO207_1704	COG0183	Belongs to the thiolase family
VCSRO207_1707	COG2067	long-chain fatty acid transport protein
VCSRO207_1709	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
VCSRO207_1710	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
VCSRO207_1711	COG2982	Protein involved in outer membrane biogenesis
VCSRO207_1712	COG0572	uridine kinase
VCSRO207_1713	COG0489	protein tyrosine kinase activity
VCSRO207_1714	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VCSRO207_1714	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VCSRO207_1716	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
VCSRO207_1718	COG0517	IMP dehydrogenase activity
VCSRO207_1718	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
VCSRO207_1718	COG0617	tRNA 3'-terminal CCA addition
VCSRO207_1719	COG2199	diguanylate cyclase activity
VCSRO207_1720	COG0314	molybdopterin synthase activity
VCSRO207_1721	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
VCSRO207_1722	COG0315	cyclic pyranopterin monophosphate synthase activity
VCSRO207_1723	COG0521	Mo-molybdopterin cofactor biosynthetic process
VCSRO207_1724	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
VCSRO207_1725	COG0391	Required for morphogenesis under gluconeogenic growth conditions
VCSRO207_1726	COG2198	Histidine kinase
VCSRO207_1727	COG2204	response regulator
VCSRO207_1728	COG0556	nucleotide-excision repair
VCSRO207_1730	COG4657	Part of a membrane complex involved in electron transport
VCSRO207_1731	COG2878	Part of a membrane complex involved in electron transport
VCSRO207_1732	COG4656	Part of a membrane complex involved in electron transport
VCSRO207_1735	COG4660	Part of a membrane complex involved in electron transport
VCSRO207_1736	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
VCSRO207_1737	COG0346	lactoylglutathione lyase activity
VCSRO207_1740	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
VCSRO207_1741	COG2056	Na+-H+ antiporter family
VCSRO207_1742	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
VCSRO207_1743	COG1286	toxin biosynthetic process
VCSRO207_1744	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
VCSRO207_1745	COG0285	dihydrofolate synthase activity
VCSRO207_1746	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
VCSRO207_1747	COG0101	tRNA pseudouridine synthase activity
VCSRO207_1750	COG2190	(PTS) system
VCSRO207_1750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VCSRO207_1750	COG1263	PTS System
VCSRO207_1751	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VCSRO207_1752	COG1940	carbohydrate kinase activity
VCSRO207_1752	COG1846	Transcriptional regulator
VCSRO207_1753	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VCSRO207_1753	COG4651	solute:proton antiporter activity
VCSRO207_1754	COG0367	asparagine synthase
VCSRO207_1757	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
VCSRO207_1758	COG0563	adenylate kinase activity
VCSRO207_1759	COG0326	Molecular chaperone. Has ATPase activity
VCSRO207_1760	COG3710	Transcriptional regulator
VCSRO207_1763	COG0622	Phosphoesterase
VCSRO207_1764	COG1090	epimerase
VCSRO207_1765	COG0300	oxidoreductase activity
VCSRO207_1766	COG3118	belongs to the thioredoxin family
VCSRO207_1767	COG0330	HflC and HflK could
VCSRO207_1768	COG1585	Membrane protein implicated in regulation of membrane protease activity
VCSRO207_1769	COG0789	Transcriptional regulator
VCSRO207_1772	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
VCSRO207_1773	COG3115	cell septum assembly
VCSRO207_1774	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
VCSRO207_1775	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
VCSRO207_1776	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VCSRO207_1778	COG2190	(PTS) system
VCSRO207_1779	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VCSRO207_1780	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
VCSRO207_1781	COG1702	phosphate starvation-inducible protein PhoH
VCSRO207_1783	COG4535	Mg2 and Co2 transporter CorC
VCSRO207_1784	COG0815	Transfers the fatty acyl group on membrane lipoproteins
VCSRO207_1785	COG2888	peptidyl-tyrosine sulfation
VCSRO207_1786	COG0495	leucyl-tRNA aminoacylation
VCSRO207_1787	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
VCSRO207_1788	COG1466	dna polymerase III delta subunit
VCSRO207_1789	COG0799	negative regulation of ribosome biogenesis
VCSRO207_1790	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
VCSRO207_1791	COG0768	penicillin binding
VCSRO207_1792	COG0772	Belongs to the SEDS family
VCSRO207_1793	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VCSRO207_1794	COG1686	Belongs to the peptidase S11 family
VCSRO207_1795	COG2921	Belongs to the UPF0250 family
VCSRO207_1796	COG0321	lipoyl(octanoyl) transferase activity
VCSRO207_1797	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
VCSRO207_1799	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VCSRO207_1804	COG1596	polysaccharide export
VCSRO207_1806	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VCSRO207_1812	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
VCSRO207_1814	COG0438	transferase activity, transferring glycosyl groups
VCSRO207_1816	COG1045	serine acetyltransferase
VCSRO207_1821	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
VCSRO207_1822	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
VCSRO207_1824	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VCSRO207_1830	COG0366	Alpha amylase catalytic
VCSRO207_1831	COG1263	PTS System
VCSRO207_1831	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VCSRO207_1832	COG1609	Transcriptional regulator
VCSRO207_1833	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VCSRO207_1834	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
VCSRO207_1835	COG2011	ABC-type metal ion transport system permease component
VCSRO207_1836	COG1464	Belongs to the NlpA lipoprotein family
VCSRO207_1837	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
VCSRO207_1839	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
VCSRO207_1839	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
VCSRO207_1842	COG1611	Belongs to the LOG family
VCSRO207_1843	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VCSRO207_1844	COG2363	Small membrane protein
VCSRO207_1845	COG0583	DNA-binding transcription factor activity
VCSRO207_1846	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VCSRO207_1846	COG0301	tRNA thio-modification
VCSRO207_1848	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
VCSRO207_1849	COG1722	exodeoxyribonuclease VII activity
VCSRO207_1850	COG0142	geranyltranstransferase activity
VCSRO207_1851	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
VCSRO207_1852	COG0564	pseudouridine synthase activity
VCSRO207_1853	COG3098	single-species biofilm formation
VCSRO207_1856	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VCSRO207_1858	COG1671	Belongs to the UPF0178 family
VCSRO207_1859	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VCSRO207_1860	COG0257	Belongs to the bacterial ribosomal protein bL36 family
VCSRO207_1861	COG0254	rRNA binding
VCSRO207_1862	COG1720	tRNA m6t6A37 methyltransferase activity
VCSRO207_1863	COG0442	prolyl-tRNA aminoacylation
VCSRO207_1867	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
VCSRO207_1867	COG0047	phosphoribosylformylglycinamidine synthase activity
VCSRO207_1868	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VCSRO207_1871	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VCSRO207_1877	COG0484	heat shock protein binding
VCSRO207_1878	COG0443	Heat shock 70 kDa protein
VCSRO207_1879	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
VCSRO207_1880	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
VCSRO207_1881	COG0497	DNA recombination
VCSRO207_1882	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VCSRO207_1883	COG2914	Belongs to the UPF0125 (RnfH) family
VCSRO207_1884	COG2867	negative regulation of translational initiation
VCSRO207_1885	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
VCSRO207_1887	COG0582	viral genome integration into host DNA
VCSRO207_1893	COG1518	maintenance of DNA repeat elements
VCSRO207_1896	COG3501	Rhs element vgr protein
VCSRO207_1906	COG2003	Belongs to the UPF0758 family
VCSRO207_1920	COG0514	ATP-dependent DNA helicase (RecQ)
VCSRO207_1924	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
VCSRO207_1925	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
VCSRO207_1926	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VCSRO207_1930	COG3051	citrate lyase alpha subunit
VCSRO207_1931	COG2301	Belongs to the HpcH HpaI aldolase family
VCSRO207_1932	COG3052	prosthetic group binding
VCSRO207_1933	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
VCSRO207_1935	COG3630	sodium ion export across plasma membrane
VCSRO207_1936	COG0511	ligase activity, forming carbon-carbon bonds
VCSRO207_1936	COG5016	pyruvate
VCSRO207_1937	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VCSRO207_1939	COG4565	transcriptional regulatory protein
VCSRO207_1944	COG1115	amino acid carrier protein
VCSRO207_1945	COG2015	COG2015, Alkyl sulfatase and related hydrolases
VCSRO207_1946	COG0583	DNA-binding transcription factor activity
VCSRO207_1948	COG1120	ATPase activity
VCSRO207_1949	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VCSRO207_1950	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VCSRO207_1951	COG4592	Periplasmic binding protein
VCSRO207_1953	COG1028	Short-chain dehydrogenase reductase Sdr
VCSRO207_1954	COG1169	isochorismate synthase
VCSRO207_1955	COG1021	2,3-dihydroxybenzoate-AMP ligase
VCSRO207_1956	COG3433	isochorismatase activity
VCSRO207_1956	COG1535	isochorismatase
VCSRO207_1957	COG1584	GPR1 FUN34 yaaH family protein
VCSRO207_1959	COG3023	N-Acetylmuramoyl-L-alanine amidase
VCSRO207_1961	COG0519	Catalyzes the synthesis of GMP from XMP
VCSRO207_1961	COG0518	GMP synthase (glutamine-hydrolyzing) activity
VCSRO207_1962	COG0516	GMP reductase activity
VCSRO207_1962	COG0517	IMP dehydrogenase activity
VCSRO207_1963	COG1570	exodeoxyribonuclease VII activity
VCSRO207_1966	COG1160	GTP binding
VCSRO207_1967	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VCSRO207_1968	COG2976	Protein conserved in bacteria
VCSRO207_1969	COG0124	histidyl-tRNA synthetase
VCSRO207_1970	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
VCSRO207_1971	COG1426	Protein conserved in bacteria
VCSRO207_1973	COG0105	UTP biosynthetic process
VCSRO207_1974	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VCSRO207_1975	COG2975	iron-sulfur cluster assembly
VCSRO207_1976	COG0633	Ferredoxin
VCSRO207_1980	COG0822	iron-sulfur transferase activity
VCSRO207_1982	COG1959	2 iron, 2 sulfur cluster binding
VCSRO207_1984	COG0483	inositol monophosphate 1-phosphatase activity
VCSRO207_1985	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VCSRO207_1986	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VCSRO207_1987	COG1862	Preprotein translocase
VCSRO207_1989	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
VCSRO207_1990	COG0517	IMP dehydrogenase activity
VCSRO207_1992	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
VCSRO207_1993	COG0583	DNA-binding transcription factor activity
VCSRO207_1994	COG0450	alkyl hydroperoxide reductase
VCSRO207_1995	COG3142	Participates in the control of copper homeostasis
VCSRO207_1998	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
VCSRO207_1999	COG0581	inorganic phosphate transmembrane transporter activity
VCSRO207_2001	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
VCSRO207_2002	COG0248	Ppx GppA phosphatase
VCSRO207_2004	COG5002	protein histidine kinase activity
VCSRO207_2005	COG0745	RESPONSE REGULATOR receiver
VCSRO207_2007	COG0826	peptidase U32
VCSRO207_2008	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VCSRO207_2017	COG0542	response to heat
VCSRO207_2018	COG1496	oxidoreductase activity
VCSRO207_2019	COG0564	pseudouridine synthase activity
VCSRO207_2020	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VCSRO207_2021	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VCSRO207_2022	COG0077	Prephenate dehydratase
VCSRO207_2022	COG1605	Chorismate mutase
VCSRO207_2023	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VCSRO207_2024	COG5001	Diguanylate cyclase
VCSRO207_2026	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
VCSRO207_2028	COG0488	(ABC) transporter
VCSRO207_2030	COG0287	Prephenate dehydrogenase
VCSRO207_2030	COG1605	Chorismate mutase
VCSRO207_2031	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VCSRO207_2032	COG3275	phosphorelay sensor kinase activity
VCSRO207_2033	COG3279	Response regulator of the LytR AlgR family
VCSRO207_2035	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
VCSRO207_2036	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
VCSRO207_2038	COG1966	Carbon starvation protein
VCSRO207_2039	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
VCSRO207_2040	COG1047	Peptidyl-prolyl cis-trans
VCSRO207_2041	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
VCSRO207_2043	COG0196	riboflavin kinase activity
VCSRO207_2044	COG0728	peptidoglycan biosynthetic process
VCSRO207_2045	COG0268	Binds directly to 16S ribosomal RNA
VCSRO207_2046	COG0640	Transcriptional regulator
VCSRO207_2047	COG0583	DNA-binding transcription factor activity
VCSRO207_2048	COG1283	sodium-dependent phosphate transmembrane transporter activity
VCSRO207_2050	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
VCSRO207_2051	COG0730	response to heat
VCSRO207_2052	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
VCSRO207_2053	COG0494	nUDIX hydrolase
VCSRO207_2055	COG0667	Aldo Keto reductase
VCSRO207_2058	COG2204	response regulator
VCSRO207_2059	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
VCSRO207_2060	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
VCSRO207_2063	COG0513	Belongs to the DEAD box helicase family
VCSRO207_2068	COG3153	acetyltransferase
VCSRO207_2069	COG3154	lipid carrier protein
VCSRO207_2071	COG0826	peptidase U32
VCSRO207_2072	COG0826	peptidase U32
VCSRO207_2077	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
VCSRO207_2079	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
VCSRO207_2080	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
VCSRO207_2081	COG0195	Participates in both transcription termination and antitermination
VCSRO207_2082	COG0779	Required for maturation of 30S ribosomal subunits
VCSRO207_2085	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VCSRO207_2088	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
VCSRO207_2089	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VCSRO207_2090	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
VCSRO207_2091	COG1534	Rna-binding protein
VCSRO207_2092	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VCSRO207_2093	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VCSRO207_2094	COG2027	D-alanyl-D-alanine carboxypeptidase
VCSRO207_2095	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VCSRO207_2096	COG0739	heme binding
VCSRO207_2099	COG0316	Belongs to the HesB IscA family
VCSRO207_2100	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
VCSRO207_2102	COG0628	permease
VCSRO207_2103	COG2813	Specifically methylates the guanine in position
VCSRO207_2105	COG0747	negative chemotaxis
VCSRO207_2106	COG0601	transmembrane transport
VCSRO207_2107	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VCSRO207_2108	COG0444	Belongs to the ABC transporter superfamily
VCSRO207_2109	COG4608	Belongs to the ABC transporter superfamily
VCSRO207_2111	COG2971	BadF BadG BcrA BcrD
VCSRO207_2115	COG3842	ATPase activity
VCSRO207_2117	COG1840	ABC-type Fe3 transport system, periplasmic component
VCSRO207_2118	COG0004	ammonium transporteR
VCSRO207_2119	COG0347	Belongs to the P(II) protein family
VCSRO207_2120	COG3112	Uncharacterised protein family (UPF0231)
VCSRO207_2121	COG1049	propionate catabolic process, 2-methylcitrate cycle
VCSRO207_2122	COG1752	Esterase of the alpha-beta hydrolase superfamily
VCSRO207_2123	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VCSRO207_2124	COG1643	Atp-dependent helicase
VCSRO207_2126	COG1489	DNA binding
VCSRO207_2128	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VCSRO207_2130	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VCSRO207_2131	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
VCSRO207_2132	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
VCSRO207_2133	COG0842	Transport permease protein
VCSRO207_2134	COG1131	(ABC) transporter
VCSRO207_2135	COG0659	secondary active sulfate transmembrane transporter activity
VCSRO207_2136	COG0288	reversible hydration of carbon dioxide
VCSRO207_2140	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
VCSRO207_2141	COG3107	peptidoglycan biosynthetic process
VCSRO207_2142	COG0792	nuclease activity
VCSRO207_2143	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VCSRO207_2144	COG2823	Periplasmic or secreted lipoprotein
VCSRO207_2145	COG2969	positive regulation of protein catabolic process
VCSRO207_2146	COG0625	glutathione transferase activity
VCSRO207_2147	COG2857	Cytochrome c1
VCSRO207_2148	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
VCSRO207_2149	COG0723	plastoquinol--plastocyanin reductase activity
VCSRO207_2150	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
VCSRO207_2151	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
VCSRO207_2152	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
VCSRO207_2154	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VCSRO207_2155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VCSRO207_2156	COG0335	large ribosomal subunit rRNA binding
VCSRO207_2157	COG0336	Belongs to the RNA methyltransferase TrmD family
VCSRO207_2158	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
VCSRO207_2159	COG0228	four-way junction DNA binding
VCSRO207_2160	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
VCSRO207_2162	COG4137	Cytochrome C assembly protein
VCSRO207_2163	COG4536	flavin adenine dinucleotide binding
VCSRO207_2164	COG1854	S-ribosylhomocysteine lyase activity
VCSRO207_2165	COG2918	glutathione biosynthetic process
VCSRO207_2166	COG0612	Peptidase, M16
VCSRO207_2167	COG1238	metal cluster binding
VCSRO207_2169	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VCSRO207_2170	COG5016	pyruvate
VCSRO207_2170	COG0511	ligase activity, forming carbon-carbon bonds
VCSRO207_2171	COG3630	sodium ion export across plasma membrane
VCSRO207_2180	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
VCSRO207_2181	COG0527	aspartate kinase activity
VCSRO207_2182	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VCSRO207_2183	COG2137	regulation of response to DNA damage stimulus
VCSRO207_2184	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
VCSRO207_2186	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
VCSRO207_2187	COG4208	sulfate ABC transporter
VCSRO207_2191	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
VCSRO207_2192	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VCSRO207_2194	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
VCSRO207_2195	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
VCSRO207_2196	COG0585	pseudouridine synthase activity
VCSRO207_2197	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
VCSRO207_2198	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
VCSRO207_2199	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
VCSRO207_2200	COG1968	undecaprenyl-diphosphatase activity
VCSRO207_2201	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VCSRO207_2202	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
VCSRO207_2203	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
VCSRO207_2205	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
VCSRO207_2206	COG0828	Belongs to the bacterial ribosomal protein bS21 family
VCSRO207_2207	COG1610	YqeY-like protein
VCSRO207_2208	COG0358	DNA primase activity
VCSRO207_2211	COG0582	viral genome integration into host DNA
VCSRO207_2216	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VCSRO207_2217	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
VCSRO207_2218	COG1349	DNA-binding transcription factor activity
VCSRO207_2223	COG1279	arginine transmembrane transporter activity
VCSRO207_2224	COG0668	transmembrane transport
VCSRO207_2225	COG0191	fructose-bisphosphate aldolase activity
VCSRO207_2226	COG0126	phosphoglycerate kinase activity
VCSRO207_2227	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VCSRO207_2228	COG4771	TonB-dependent receptor
VCSRO207_2229	COG0583	DNA-binding transcription factor activity
VCSRO207_2230	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VCSRO207_2231	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
VCSRO207_2233	COG2356	endonuclease I
VCSRO207_2234	COG1385	rRNA (uridine-N3-)-methyltransferase activity
VCSRO207_2235	COG0189	ligase activity
VCSRO207_2236	COG1678	Uncharacterized ACR, COG1678
VCSRO207_2237	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
VCSRO207_2238	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VCSRO207_2242	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
VCSRO207_2243	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
VCSRO207_2244	COG0762	integral membrane protein
VCSRO207_2247	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
VCSRO207_2248	COG0635	Involved in the biosynthesis of porphyrin-containing compound
VCSRO207_2249	COG2066	Belongs to the glutaminase family
VCSRO207_2250	COG0220	tRNA (guanine-N7-)-methyltransferase activity
VCSRO207_2251	COG1194	a g-specific adenine glycosylase
VCSRO207_2252	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
VCSRO207_2253	COG0741	lytic transglycosylase activity
VCSRO207_2258	COG0840	transmembrane signaling receptor activity
VCSRO207_2264	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
VCSRO207_2265	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
VCSRO207_2266	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VCSRO207_2267	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VCSRO207_2268	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
VCSRO207_2269	COG2967	ApaG domain
VCSRO207_2270	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
VCSRO207_2272	COG3610	response to peptide
VCSRO207_2273	COG2966	Psort location CytoplasmicMembrane, score
VCSRO207_2274	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
VCSRO207_2275	COG0211	Belongs to the bacterial ribosomal protein bL27 family
VCSRO207_2276	COG0261	This protein binds to 23S rRNA in the presence of protein L20
VCSRO207_2277	COG0142	geranyltranstransferase activity
VCSRO207_2278	COG0531	amino acid
VCSRO207_2279	COG0039	L-malate dehydrogenase activity
VCSRO207_2280	COG1438	arginine binding
VCSRO207_2281	COG2358	TRAP transporter, solute receptor (TAXI family
VCSRO207_2283	COG0589	response to stress
VCSRO207_2287	COG2235	arginine
VCSRO207_2288	COG0312	modulator of DNA gyrase
VCSRO207_2289	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VCSRO207_2290	COG3164	Protein of unknown function
VCSRO207_2292	COG0424	maF-like protein
VCSRO207_2293	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
VCSRO207_2294	COG1792	Involved in formation and maintenance of cell shape
VCSRO207_2295	COG1077	Cell shape determining protein MreB Mrl
VCSRO207_2301	COG2165	general secretion pathway protein
VCSRO207_2302	COG2165	general secretion pathway protein
VCSRO207_2304	COG1459	type II secretion system
VCSRO207_2305	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VCSRO207_2307	COG3409	Peptidoglycan-binding domain 1 protein
VCSRO207_2307	COG3267	Type II secretory pathway component ExeA
VCSRO207_2312	COG2199	diguanylate cyclase activity
VCSRO207_2312	COG2200	EAL domain
VCSRO207_2313	COG0629	single-stranded DNA binding
VCSRO207_2316	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
VCSRO207_2318	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VCSRO207_2319	COG0527	aspartate kinase activity
VCSRO207_2320	COG0646	methionine synthase
VCSRO207_2320	COG1410	methionine synthase
VCSRO207_2334	COG0175	sulfate reduction
VCSRO207_2336	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VCSRO207_2340	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VCSRO207_2341	COG0735	belongs to the Fur family
VCSRO207_2344	COG0166	Belongs to the GPI family
VCSRO207_2345	COG0432	Pfam Uncharacterised protein family UPF0047
VCSRO207_2346	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VCSRO207_2349	COG0359	binds to the 23S rRNA
VCSRO207_2350	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
VCSRO207_2351	COG2965	DNA replication, synthesis of RNA primer
VCSRO207_2352	COG0360	Binds together with S18 to 16S ribosomal RNA
VCSRO207_2354	COG2906	2 iron, 2 sulfur cluster binding
VCSRO207_2355	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
VCSRO207_2356	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VCSRO207_2357	COG0049	tRNA binding
VCSRO207_2360	COG2923	Belongs to the DsrF TusC family
VCSRO207_2361	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
VCSRO207_2362	COG2964	Protein conserved in bacteria
VCSRO207_2363	COG0545	Peptidyl-prolyl cis-trans isomerase
VCSRO207_2365	COG2900	Belongs to the SlyX family
VCSRO207_2366	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
VCSRO207_2367	COG0330	HflC and HflK could
VCSRO207_2368	COG0330	HflC and HflK could
VCSRO207_2369	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
VCSRO207_2370	COG1923	regulation of RNA biosynthetic process
VCSRO207_2371	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
VCSRO207_2372	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
VCSRO207_2374	COG0802	atpase or kinase
VCSRO207_2375	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
VCSRO207_2385	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
VCSRO207_2386	COG1162	GTPase activity
VCSRO207_2387	COG0688	phosphatidylethanolamine metabolic process
VCSRO207_2388	COG0471	metal ion transport
VCSRO207_2390	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
VCSRO207_2391	COG4942	peptidase
VCSRO207_2394	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
VCSRO207_2395	COG2816	NAD+ diphosphatase activity
VCSRO207_2396	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
VCSRO207_2397	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
VCSRO207_2398	COG0085	RNA polymerase activity
VCSRO207_2399	COG0222	ribosome binding
VCSRO207_2400	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
VCSRO207_2402	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
VCSRO207_2403	COG0250	Participates in transcription elongation, termination and antitermination
VCSRO207_2404	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VCSRO207_2405	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
VCSRO207_2410	COG1072	(Pantothenic acid kinase))
VCSRO207_2412	COG0812	UDP-N-acetylmuramate dehydrogenase activity
VCSRO207_2414	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VCSRO207_2423	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
VCSRO207_2426	COG3118	belongs to the thioredoxin family
VCSRO207_2427	COG0513	Belongs to the DEAD box helicase family
VCSRO207_2428	COG0248	Ppx GppA phosphatase
VCSRO207_2429	COG0784	Response regulator, receiver
VCSRO207_2429	COG2205	protein histidine kinase activity
VCSRO207_2430	COG2814	Major facilitator Superfamily
VCSRO207_2433	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VCSRO207_2434	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
VCSRO207_2435	COG0511	ligase activity, forming carbon-carbon bonds
VCSRO207_2436	COG0439	Biotin carboxylase
VCSRO207_2437	COG2264	protein methyltransferase activity
VCSRO207_2438	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VCSRO207_2439	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
VCSRO207_2441	COG1609	Transcriptional regulator
VCSRO207_2443	COG0387	Pfam Sodium calcium exchanger
VCSRO207_2444	COG0129	dihydroxy-acid dehydratase activity
VCSRO207_2445	COG3265	gluconokinase activity
VCSRO207_2447	COG0800	Aldolase
VCSRO207_2450	COG0840	transmembrane signaling receptor activity
VCSRO207_2451	COG1982	Orn Lys Arg decarboxylase major
VCSRO207_2452	COG0531	amino acid
VCSRO207_2453	COG3710	Transcriptional regulator
VCSRO207_2454	COG0789	Transcriptional regulator
VCSRO207_2456	COG0151	Belongs to the GarS family
VCSRO207_2458	COG0776	regulation of translation
VCSRO207_2459	COG1253	flavin adenine dinucleotide binding
VCSRO207_2461	COG3068	Protein conserved in bacteria
VCSRO207_2463	COG1573	uracil-dna glycosylase
VCSRO207_2464	COG0668	transmembrane transport
VCSRO207_2465	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
VCSRO207_2467	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VCSRO207_2472	COG1086	Polysaccharide biosynthesis protein
VCSRO207_2478	COG5433	transposase activity
VCSRO207_2483	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
VCSRO207_2484	COG0367	asparagine synthase
VCSRO207_2489	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
VCSRO207_2492	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VCSRO207_2497	COG0859	PFAM glycosyl transferase family 9
VCSRO207_2499	COG1519	Transferase
VCSRO207_2505	COG3642	lipopolysaccharide core region biosynthetic process
VCSRO207_2506	COG0859	PFAM glycosyl transferase family 9
VCSRO207_2507	COG0463	Glycosyl transferase, family 2
VCSRO207_2508	COG0859	PFAM glycosyl transferase family 9
VCSRO207_2509	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
VCSRO207_2510	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
VCSRO207_2512	COG0267	Belongs to the bacterial ribosomal protein bL33 family
VCSRO207_2513	COG0227	Belongs to the bacterial ribosomal protein bL28 family
VCSRO207_2514	COG2003	Belongs to the UPF0758 family
VCSRO207_2515	COG0840	transmembrane signaling receptor activity
VCSRO207_2516	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
VCSRO207_2517	COG1309	transcriptional regulator
VCSRO207_2518	COG1560	Kdo2-lipid A biosynthetic process
VCSRO207_2519	COG1560	Kdo2-lipid A biosynthetic process
VCSRO207_2520	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
VCSRO207_2521	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
VCSRO207_2522	COG1561	YicC-like family, N-terminal region
VCSRO207_2523	COG2862	Uncharacterized protein family, UPF0114
VCSRO207_2524	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VCSRO207_2525	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VCSRO207_2525	COG1263	PTS System
VCSRO207_2526	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
VCSRO207_2529	COG0514	ATP-dependent DNA helicase (RecQ)
VCSRO207_2530	COG2962	Rard protein
VCSRO207_2531	COG0405	Gamma-glutamyltransferase
VCSRO207_2533	COG1280	lysine exporter protein (LysE YggA)
VCSRO207_2534	COG0210	DNA helicase
VCSRO207_2536	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
VCSRO207_2537	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VCSRO207_2539	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VCSRO207_2540	COG0601	transmembrane transport
VCSRO207_2541	COG0747	negative chemotaxis
VCSRO207_2550	COG1309	transcriptional regulator
VCSRO207_2551	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VCSRO207_2552	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VCSRO207_2553	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VCSRO207_2554	COG2960	long-chain fatty acid transporting porin activity
VCSRO207_2555	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
VCSRO207_2556	COG0583	DNA-binding transcription factor activity
VCSRO207_2569	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
VCSRO207_2570	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VCSRO207_2571	COG1739	Uncharacterized protein family UPF0029
VCSRO207_2572	COG1024	Enoyl-CoA hydratase
VCSRO207_2572	COG1250	3-hydroxyacyl-CoA dehydrogenase
VCSRO207_2573	COG0183	Belongs to the thiolase family
VCSRO207_2574	COG0583	DNA-binding transcription factor activity
VCSRO207_2575	COG2814	Major facilitator Superfamily
VCSRO207_2577	COG0355	proton-transporting ATP synthase activity, rotational mechanism
VCSRO207_2578	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
VCSRO207_2579	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
VCSRO207_2580	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
VCSRO207_2581	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VCSRO207_2582	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
VCSRO207_2584	COG0356	it plays a direct role in the translocation of protons across the membrane
VCSRO207_2585	COG3312	ion transport
VCSRO207_2586	COG1475	DNA binding
VCSRO207_2587	COG1192	Involved in chromosome partitioning
VCSRO207_2588	COG0357	Ribosomal RNA small subunit methyltransferase G
VCSRO207_2589	COG0445	tRNA wobble uridine modification
VCSRO207_2594	COG0217	transcriptional regulatory protein
VCSRO207_2595	COG2084	Dehydrogenase
VCSRO207_2598	COG2909	trisaccharide binding
VCSRO207_2599	COG0058	SHG alpha-glucan phosphorylase activity
VCSRO207_2600	COG1640	4-alpha-glucanotransferase
VCSRO207_2601	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
VCSRO207_2603	COG3501	Rhs element vgr protein
VCSRO207_2604	COG4104	PAAR repeat-containing protein
VCSRO207_2610	COG0471	metal ion transport
VCSRO207_2611	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VCSRO207_2617	COG0671	phosphoesterase, PA-phosphatase related
VCSRO207_2619	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
VCSRO207_2621	COG1999	signal sequence binding
VCSRO207_2624	COG0786	glutamate:sodium symporter activity
VCSRO207_2628	COG1566	PFAM secretion protein HlyD family protein
VCSRO207_2633	COG0813	purine-nucleoside phosphorylase activity
VCSRO207_2634	COG3272	Protein of unknown function (DUF1722)
VCSRO207_2636	COG0415	Belongs to the DNA photolyase family
VCSRO207_2637	COG1376	ErfK ybiS ycfS ynhG family protein
VCSRO207_2637	COG1388	LysM domain
VCSRO207_2640	COG0513	Belongs to the DEAD box helicase family
VCSRO207_2641	COG1770	oligopeptidase
VCSRO207_2646	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
VCSRO207_2647	COG0573	inorganic phosphate transmembrane transporter activity
VCSRO207_2648	COG0581	inorganic phosphate transmembrane transporter activity
VCSRO207_2649	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
VCSRO207_2652	COG3314	Sporulation integral membrane protein YlbJ
VCSRO207_2653	COG0659	secondary active sulfate transmembrane transporter activity
VCSRO207_2655	COG0739	heme binding
VCSRO207_2656	COG3300	MHYT domain
VCSRO207_2656	COG5001	Diguanylate cyclase
VCSRO207_2657	COG0583	DNA-binding transcription factor activity
VCSRO207_2658	COG2814	Major facilitator Superfamily
VCSRO207_2663	COG1301	dicarboxylic acid transport
VCSRO207_2666	COG1342	Belongs to the UPF0251 family
VCSRO207_2673	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
VCSRO207_2674	COG0673	inositol 2-dehydrogenase activity
VCSRO207_2676	COG2200	EAL domain
VCSRO207_2676	COG2771	luxR family
VCSRO207_2677	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VCSRO207_2679	COG0564	pseudouridine synthase activity
VCSRO207_2692	COG3829	transcription factor binding
VCSRO207_2697	COG3501	Rhs element vgr protein
VCSRO207_2697	COG3409	Peptidoglycan-binding domain 1 protein
VCSRO207_2702	COG1869	D-ribose catabolic process
VCSRO207_2703	COG1129	ABC transporter
VCSRO207_2704	COG1172	Belongs to the binding-protein-dependent transport system permease family
VCSRO207_2705	COG1879	ABC-type sugar transport system periplasmic component
VCSRO207_2706	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VCSRO207_2707	COG1609	Transcriptional regulator
VCSRO207_2713	COG0584	glycerophosphoryl diester phosphodiesterase
VCSRO207_2714	COG2271	Major facilitator Superfamily
VCSRO207_2722	COG0579	oxidoreductase
VCSRO207_2724	COG0242	peptide deformylase activity
VCSRO207_2727	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VCSRO207_2728	COG1609	Transcriptional regulator
VCSRO207_2730	COG1320	monovalent cation:proton antiporter activity
VCSRO207_2731	COG2212	antiporter activity
VCSRO207_2732	COG1863	multisubunit Na H antiporter MnhE subunit
VCSRO207_2733	COG0651	ATP synthesis coupled electron transport
VCSRO207_2734	COG1006	Multisubunit Na H antiporter MnhC subunit
VCSRO207_2735	COG2111	Na H antiporter
VCSRO207_2735	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
VCSRO207_2737	COG0589	response to stress
VCSRO207_2738	COG0814	amino acid
VCSRO207_2741	COG3530	Putative quorum-sensing-regulated virulence factor
VCSRO207_2743	COG5002	protein histidine kinase activity
VCSRO207_2743	COG5001	Diguanylate cyclase
VCSRO207_2744	COG1278	Cold shock
VCSRO207_2747	COG2304	oxidoreductase activity
VCSRO207_2751	COG0714	Associated with various cellular activities
VCSRO207_2752	COG0840	transmembrane signaling receptor activity
VCSRO207_2755	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VCSRO207_2756	COG2195	Cleaves the N-terminal amino acid of tripeptides
VCSRO207_2758	COG3604	Transcriptional regulator
VCSRO207_2759	COG1017	nitric oxide dioxygenase activity
VCSRO207_2759	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VCSRO207_2760	COG1278	Cold shock
VCSRO207_2761	COG3036	rescue of stalled ribosome
VCSRO207_2766	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
VCSRO207_2766	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
VCSRO207_2767	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VCSRO207_2769	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VCSRO207_2771	COG0516	GMP reductase activity
VCSRO207_2773	COG0513	Belongs to the DEAD box helicase family
VCSRO207_2774	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VCSRO207_2775	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
VCSRO207_2776	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
VCSRO207_2778	COG3437	response regulator, receiver
VCSRO207_2778	COG0784	Response regulator, receiver
VCSRO207_2780	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VCSRO207_2780	COG4191	Histidine kinase
VCSRO207_2782	COG1757	Na H antiporter
VCSRO207_2783	COG2814	Major facilitator Superfamily
VCSRO207_2785	COG3240	lipase activity
VCSRO207_2787	COG0840	transmembrane signaling receptor activity
VCSRO207_2788	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
VCSRO207_2789	COG5380	lipid catabolic process
VCSRO207_2794	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VCSRO207_2795	COG4605	iron ion homeostasis
VCSRO207_2796	COG4604	ABC transporter, ATP-binding protein
VCSRO207_2797	COG2207	Transcriptional regulator
VCSRO207_2800	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VCSRO207_2803	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
VCSRO207_2805	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VCSRO207_2807	COG0583	DNA-binding transcription factor activity
VCSRO207_2810	COG0745	RESPONSE REGULATOR receiver
VCSRO207_2816	COG3623	hexulose-6-phosphate isomerase
VCSRO207_2817	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
VCSRO207_2818	COG0561	phosphatase activity
VCSRO207_2825	COG0366	Alpha amylase catalytic
VCSRO207_2833	COG0745	RESPONSE REGULATOR receiver
VCSRO207_2839	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VCSRO207_2842	COG2814	Major facilitator Superfamily
VCSRO207_2845	COG1686	Belongs to the peptidase S11 family
VCSRO207_2850	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
VCSRO207_2850	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
VCSRO207_2851	COG0509	glycine decarboxylation via glycine cleavage system
VCSRO207_2852	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VCSRO207_2854	COG0404	The glycine cleavage system catalyzes the degradation of glycine
VCSRO207_2857	COG0291	Belongs to the bacterial ribosomal protein bL35 family
VCSRO207_2858	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
VCSRO207_2860	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VCSRO207_2877	COG2161	toxin-antitoxin pair type II binding
VCSRO207_2878	COG4115	mRNA cleavage
VCSRO207_2897	COG3040	lipid binding
VCSRO207_2901	COG3549	Plasmid maintenance system killer
VCSRO207_2902	COG3093	addiction module antidote protein HigA
VCSRO207_2918	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
VCSRO207_2920	COG0494	nUDIX hydrolase
VCSRO207_2925	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
VCSRO207_2928	COG0346	lactoylglutathione lyase activity
VCSRO207_2967	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VCSRO207_2989	COG4977	sequence-specific DNA binding
VCSRO207_2990	COG2161	toxin-antitoxin pair type II binding
VCSRO207_2991	COG4115	mRNA cleavage
VCSRO207_2993	COG1605	Chorismate mutase
VCSRO207_2996	COG0545	Peptidyl-prolyl cis-trans isomerase
VCSRO207_2998	COG2885	chlorophyll binding
VCSRO207_2999	COG0840	transmembrane signaling receptor activity
VCSRO207_3000	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
VCSRO207_3001	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VCSRO207_3002	COG1621	beta-fructofuranosidase activity
VCSRO207_3003	COG1609	Transcriptional regulator
VCSRO207_3004	COG1263	PTS System
VCSRO207_3004	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VCSRO207_3013	COG0446	pyridine nucleotide-disulphide oxidoreductase
VCSRO207_3021	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
VCSRO207_3022	COG0583	DNA-binding transcription factor activity
VCSRO207_3027	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VCSRO207_3034	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VCSRO207_3037	COG2390	Transcriptional regulator
VCSRO207_3038	COG2897	thiosulfate sulfurtransferase activity
VCSRO207_3040	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VCSRO207_3042	COG0302	gtp cyclohydrolase
VCSRO207_3043	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VCSRO207_3043	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VCSRO207_3044	COG2759	Belongs to the formate--tetrahydrofolate ligase family
VCSRO207_3045	COG1970	mechanosensitive ion channel activity
VCSRO207_3046	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
VCSRO207_3049	COG1011	Hydrolase
VCSRO207_3050	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VCSRO207_3051	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VCSRO207_3052	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VCSRO207_3053	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VCSRO207_3054	COG1840	ABC-type Fe3 transport system, periplasmic component
VCSRO207_3055	COG3842	ATPase activity
VCSRO207_3059	COG3104	oligopeptide transport
VCSRO207_3064	COG4166	transmembrane transport
VCSRO207_3065	COG4174	ABC transporter (Permease)
VCSRO207_3066	COG4239	(ABC) transporter, permease
VCSRO207_3067	COG4172	Belongs to the ABC transporter superfamily
VCSRO207_3068	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
VCSRO207_3071	COG0625	glutathione transferase activity
VCSRO207_3075	COG2050	protein possibly involved in aromatic compounds catabolism
VCSRO207_3078	COG4771	TonB-dependent receptor
VCSRO207_3079	COG0583	DNA-binding transcription factor activity
VCSRO207_3080	COG0045	succinate-CoA ligase (ADP-forming) activity
VCSRO207_3080	COG1042	CoA-binding domain protein
VCSRO207_3080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VCSRO207_3084	COG0023	Translation Initiation Factor
VCSRO207_3085	COG3140	Belongs to the UPF0181 family
VCSRO207_3088	COG0745	RESPONSE REGULATOR receiver
VCSRO207_3090	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
VCSRO207_3091	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
VCSRO207_3094	COG3706	GGDEF domain
VCSRO207_3103	COG2824	Alkylphosphonate utilization operon protein PhnA
VCSRO207_3106	COG0737	Belongs to the 5'-nucleotidase family
VCSRO207_3107	COG3593	DNA synthesis involved in DNA repair
VCSRO207_3109	COG0583	DNA-binding transcription factor activity
VCSRO207_3110	COG2116	formate transmembrane transporter activity
VCSRO207_3112	COG3038	cytochrome b561
VCSRO207_3114	COG2200	EAL domain
VCSRO207_3117	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
VCSRO207_3118	COG0745	RESPONSE REGULATOR receiver
VCSRO207_3119	COG2205	protein histidine kinase activity
VCSRO207_3120	COG0674	pyruvate-flavodoxin oxidoreductase activity
VCSRO207_3120	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
VCSRO207_3120	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
VCSRO207_3120	COG1013	pyruvate-flavodoxin oxidoreductase activity
VCSRO207_3121	COG3158	transport of potassium into the cell
VCSRO207_3123	COG0523	cobalamin synthesis protein
VCSRO207_3124	COG0038	chloride channel
VCSRO207_3126	COG0156	8-amino-7-oxononanoate synthase activity
VCSRO207_3127	COG2205	protein histidine kinase activity
VCSRO207_3127	COG0784	Response regulator, receiver
VCSRO207_3128	COG0419	ATPase involved in DNA repair
VCSRO207_3129	COG0420	3'-5' exonuclease activity
VCSRO207_3130	COG1609	Transcriptional regulator
VCSRO207_3131	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VCSRO207_3131	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
VCSRO207_3132	COG1105	Belongs to the carbohydrate kinase PfkB family
VCSRO207_3133	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VCSRO207_3133	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
VCSRO207_3133	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VCSRO207_3134	COG0189	ligase activity
VCSRO207_3134	COG4067	protein conserved in archaea
VCSRO207_3136	COG0602	queuosine metabolic process
VCSRO207_3137	COG1328	CTP reductase activity
VCSRO207_3139	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VCSRO207_3140	COG0840	transmembrane signaling receptor activity
VCSRO207_3141	COG3069	C4-dicarboxylate transmembrane transporter activity
VCSRO207_3142	COG1760	l-serine dehydratase
VCSRO207_3143	COG2197	response regulator
VCSRO207_3144	COG3850	Histidine kinase
VCSRO207_3145	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VCSRO207_3147	COG0243	molybdopterin cofactor binding
VCSRO207_3151	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VCSRO207_3152	COG2197	response regulator
VCSRO207_3153	COG3851	Histidine kinase
VCSRO207_3154	COG2271	Major facilitator Superfamily
VCSRO207_3155	COG1840	ABC-type Fe3 transport system, periplasmic component
VCSRO207_3157	COG3842	ATPase activity
VCSRO207_3158	COG3243	poly(R)-hydroxyalkanoic acid synthase
VCSRO207_3160	COG0183	Belongs to the thiolase family
VCSRO207_3162	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VCSRO207_3163	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VCSRO207_3167	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VCSRO207_3169	COG1979	alcohol dehydrogenase
VCSRO207_3172	COG4191	Histidine kinase
VCSRO207_3174	COG2271	Major facilitator Superfamily
VCSRO207_3175	COG0469	pyruvate kinase activity
VCSRO207_3177	COG1879	ABC-type sugar transport system periplasmic component
VCSRO207_3178	COG1803	Methylglyoxal synthase
VCSRO207_3179	COG1335	isochorismatase
VCSRO207_3180	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
VCSRO207_3181	COG0210	DNA helicase
VCSRO207_3182	COG1289	transmembrane transporter activity
VCSRO207_3188	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
VCSRO207_3189	COG4149	molybdate abc transporter
VCSRO207_3190	COG0725	ABC transporter, periplasmic molybdate-binding protein
VCSRO207_3191	COG1492	cobalamin metabolic process
VCSRO207_3200	COG4977	sequence-specific DNA binding
VCSRO207_3200	COG1917	Cupin 2, conserved barrel domain protein
VCSRO207_3202	COG2814	Major facilitator Superfamily
VCSRO207_3203	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VCSRO207_3203	COG2226	methyltransferase
VCSRO207_3203	COG3433	isochorismatase activity
VCSRO207_3208	COG1021	2,3-dihydroxybenzoate-AMP ligase
VCSRO207_3209	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VCSRO207_3213	COG1132	(ABC) transporter
VCSRO207_3214	COG1132	(ABC) transporter
VCSRO207_3216	COG0784	Response regulator, receiver
VCSRO207_3216	COG5002	protein histidine kinase activity
VCSRO207_3217	COG1879	ABC-type sugar transport system periplasmic component
VCSRO207_3219	COG2827	Endonuclease containing a URI domain
VCSRO207_3222	COG2926	Belongs to the UPF0265 family
VCSRO207_3226	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
VCSRO207_3227	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
VCSRO207_3229	COG0247	lactate metabolic process
VCSRO207_3230	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VCSRO207_3231	COG3118	belongs to the thioredoxin family
VCSRO207_3237	COG0583	DNA-binding transcription factor activity
VCSRO207_3238	COG4160	amino acid transport
VCSRO207_3239	COG4215	(ABC) transporter
VCSRO207_3240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VCSRO207_3241	COG1126	abc transporter atp-binding protein
VCSRO207_3243	COG2425	protein containing a von Willebrand factor type A (vWA) domain
VCSRO207_3246	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
VCSRO207_3248	COG1309	transcriptional regulator
VCSRO207_3249	COG0513	Belongs to the DEAD box helicase family
VCSRO207_3250	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
VCSRO207_3252	COG0814	amino acid
VCSRO207_3253	COG0840	transmembrane signaling receptor activity
VCSRO207_3254	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VCSRO207_3255	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
VCSRO207_3257	COG1984	allophanate hydrolase subunit 2
VCSRO207_3260	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
VCSRO207_3261	COG4181	ATPase activity
VCSRO207_3263	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VCSRO207_3264	COG1716	ATPase activity
VCSRO207_3264	COG5001	Diguanylate cyclase
VCSRO207_3266	COG0484	heat shock protein binding
VCSRO207_3270	COG0546	phosphoglycolate phosphatase activity
VCSRO207_3273	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VCSRO207_3275	COG0513	Belongs to the DEAD box helicase family
VCSRO207_3278	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
VCSRO207_3280	COG3046	protein related to deoxyribodipyrimidine photolyase
VCSRO207_3281	COG3397	chitin binding
VCSRO207_3282	COG3227	Zinc metalloprotease (Elastase)
VCSRO207_3284	COG0010	Belongs to the arginase family
VCSRO207_3285	COG1166	arginine decarboxylase activity
VCSRO207_3287	COG2239	Acts as a magnesium transporter
VCSRO207_3288	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
VCSRO207_3289	COG0459	protein refolding
VCSRO207_3291	COG0527	aspartate kinase activity
VCSRO207_3292	COG0662	Cupin 2, conserved barrel domain protein
VCSRO207_3293	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VCSRO207_3294	COG0456	acetyltransferase
VCSRO207_3295	COG2154	pterin-4-alpha-carbinolamine dehydratase
VCSRO207_3296	COG3186	Phenylalanine-4-hydroxylase
VCSRO207_3297	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VCSRO207_3300	COG2264	protein methyltransferase activity
VCSRO207_3305	COG1253	flavin adenine dinucleotide binding
VCSRO207_3306	COG1765	OsmC-like protein
VCSRO207_3312	COG1252	NADH dehydrogenase
VCSRO207_3313	COG0531	amino acid
VCSRO207_3316	COG3279	Response regulator of the LytR AlgR family
VCSRO207_3317	COG3275	phosphorelay sensor kinase activity
VCSRO207_3320	COG0577	efflux transmembrane transporter activity
VCSRO207_3320	COG1136	(ABC) transporter
VCSRO207_3321	COG1136	(ABC) transporter
VCSRO207_3323	COG4989	oxidoreductase activity
VCSRO207_3324	COG0366	Alpha amylase catalytic
VCSRO207_3325	COG2067	long-chain fatty acid transport protein
VCSRO207_3326	COG2267	carboxylic ester hydrolase activity
VCSRO207_3328	COG3227	Zinc metalloprotease (Elastase)
VCSRO207_3329	COG3047	cAMP biosynthetic process
VCSRO207_3332	COG1686	Belongs to the peptidase S11 family
VCSRO207_3333	COG0557	exoribonuclease II activity
VCSRO207_3334	COG1278	Cold shock
VCSRO207_3336	COG3048	D-serine ammonia-lyase activity
VCSRO207_3337	COG0583	DNA-binding transcription factor activity
VCSRO207_3338	COG0583	DNA-binding transcription factor activity
VCSRO207_3353	COG3501	Rhs element vgr protein
VCSRO207_3381	COG0798	PFAM Bile acid sodium symporter
VCSRO207_3382	COG0640	Transcriptional regulator
VCSRO207_3384	COG5002	protein histidine kinase activity
VCSRO207_3398	COG1063	alcohol dehydrogenase
VCSRO207_3404	COG0346	lactoylglutathione lyase activity
VCSRO207_3409	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VCSRO207_3410	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
VCSRO207_3411	COG0363	glucosamine-6-phosphate deaminase activity
VCSRO207_3412	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
VCSRO207_3417	COG1929	Belongs to the glycerate kinase type-1 family
VCSRO207_3419	COG0748	coenzyme F420 binding
VCSRO207_3420	COG3721	Heme iron utilization protein
VCSRO207_3422	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
VCSRO207_3423	COG0811	peptide transport
VCSRO207_3424	COG0848	biopolymer transport protein
VCSRO207_3425	COG4558	Periplasmic binding protein
VCSRO207_3426	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VCSRO207_3427	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
VCSRO207_3434	COG0633	Ferredoxin
VCSRO207_3434	COG0633	Ferredoxin
VCSRO207_3434	COG3217	Mosc domain protein beta barrel domain protein
VCSRO207_3434	COG3217	Mosc domain protein beta barrel domain protein
VCSRO207_3435	COG0418	dihydroorotase activity
VCSRO207_3437	COG3152	Membrane
VCSRO207_3439	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
VCSRO207_3440	COG2354	Protein conserved in bacteria
VCSRO207_3442	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VCSRO207_3443	COG1278	Cold shock
VCSRO207_3449	COG2199	diguanylate cyclase activity
VCSRO207_3450	COG1349	DNA-binding transcription factor activity
VCSRO207_3453	COG3833	ABC-type maltose transport systems, permease component
VCSRO207_3454	COG1175	transmembrane transport
VCSRO207_3456	COG3842	ATPase activity
VCSRO207_3457	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VCSRO207_3460	COG0393	Putative heavy-metal-binding
VCSRO207_3462	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VCSRO207_3463	COG0784	Response regulator, receiver
VCSRO207_3463	COG0835	chemotaxis
VCSRO207_3464	COG1846	Transcriptional regulator
VCSRO207_3465	COG3706	GGDEF domain
VCSRO207_3472	COG0583	DNA-binding transcription factor activity
VCSRO207_3473	COG5001	Diguanylate cyclase
VCSRO207_3475	COG1741	Belongs to the pirin family
VCSRO207_3476	COG3123	guanosine phosphorylase activity
VCSRO207_3478	COG2211	Major facilitator Superfamily
VCSRO207_3481	COG1067	ATP-dependent peptidase activity
VCSRO207_3483	COG4172	Belongs to the ABC transporter superfamily
VCSRO207_3487	COG0583	DNA-binding transcription factor activity
VCSRO207_3488	COG1620	l-lactate permease
VCSRO207_3491	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
VCSRO207_3493	COG0840	transmembrane signaling receptor activity
VCSRO207_3497	COG2258	MOSC domain
VCSRO207_3498	COG0513	Belongs to the DEAD box helicase family
VCSRO207_3500	COG2186	Transcriptional regulator
VCSRO207_3502	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VCSRO207_3504	COG0246	Mannitol dehydrogenase
VCSRO207_3505	COG1904	glucuronate isomerase
VCSRO207_3506	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VCSRO207_3507	COG0800	Aldolase
VCSRO207_3509	COG0583	DNA-binding transcription factor activity
VCSRO207_3511	COG1902	pentaerythritol trinitrate reductase activity
VCSRO207_3513	COG1132	(ABC) transporter
VCSRO207_3515	COG1902	pentaerythritol trinitrate reductase activity
VCSRO207_3517	COG1280	lysine exporter protein (LysE YggA)
VCSRO207_3518	COG2207	Transcriptional regulator
VCSRO207_3522	COG1846	Transcriptional regulator
VCSRO207_3523	COG1764	response to oxidative stress
VCSRO207_3524	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VCSRO207_3525	COG0697	spore germination
VCSRO207_3528	COG0700	Nucleoside recognition
VCSRO207_3529	COG3366	ferrous iron transmembrane transporter activity
VCSRO207_3530	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
VCSRO207_3532	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
VCSRO207_3533	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
VCSRO207_3534	COG2259	Doxx family
VCSRO207_3539	COG0363	glucosamine-6-phosphate deaminase activity
VCSRO207_3542	COG4580	involved in the transport of maltose and maltodextrins
VCSRO207_3545	COG0840	transmembrane signaling receptor activity
VCSRO207_3548	COG0840	transmembrane signaling receptor activity
VCSRO207_3549	COG3706	GGDEF domain
VCSRO207_3551	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VCSRO207_3552	COG1126	abc transporter atp-binding protein
VCSRO207_3554	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VCSRO207_3555	COG4597	amino acid ABC transporter
VCSRO207_3556	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VCSRO207_3557	COG2213	PTS system mannitol-specific
VCSRO207_3557	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
VCSRO207_3558	COG0246	Mannitol dehydrogenase
VCSRO207_3559	COG3722	fumarate hydratase activity
VCSRO207_3560	COG0673	inositol 2-dehydrogenase activity
VCSRO207_3566	COG2910	NAD(P)H-binding
VCSRO207_3568	COG0840	transmembrane signaling receptor activity
VCSRO207_3569	COG4221	oxidoreductase activity
VCSRO207_3572	COG1901	pseudouridine methyltransferase
VCSRO207_3574	COG0531	amino acid
VCSRO207_3575	COG1982	Orn Lys Arg decarboxylase major
VCSRO207_3580	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VCSRO207_3585	COG1262	PFAM Formylglycine-generating sulfatase enzyme
VCSRO207_3598	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
VCSRO207_3599	COG0840	transmembrane signaling receptor activity
VCSRO207_3600	COG0835	chemotaxis
VCSRO207_3601	COG0835	chemotaxis
VCSRO207_3602	COG0643	Histidine kinase
VCSRO207_3602	COG2198	Histidine kinase
VCSRO207_3606	COG0601	transmembrane transport
VCSRO207_3607	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VCSRO207_3608	COG4608	Belongs to the ABC transporter superfamily
VCSRO207_3609	COG1444	tRNA N-acetyltransferase activity
VCSRO207_3610	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine