locus-tag class description HPY17_00005 PF00308 Bacterial dnaA protein HPY17_00005 PF08299 Bacterial dnaA protein helix-turn-helix HPY17_00005 PF11638 DnaA N-terminal domain HPY17_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HPY17_00010 PF02767 DNA polymerase III beta subunit, central domain HPY17_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HPY17_00015 PF02463 RecF/RecN/SMC N terminal domain HPY17_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_00020 PF00204 DNA gyrase B HPY17_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HPY17_00020 PF18053 DNA gyrase B subunit insert domain HPY17_00020 PF01751 Toprim domain HPY17_00030 PF00011 Hsp20/alpha crystallin family HPY17_00035 PF00155 Aminotransferase class I and II HPY17_00040 PF02092 Glycyl-tRNA synthetase beta subunit HPY17_00040 PF05746 DALR anticodon binding domain HPY17_00045 PF02091 Glycyl-tRNA synthetase alpha subunit HPY17_00050 PF01169 Uncharacterized protein family UPF0016 HPY17_00060 PF01206 Sulfurtransferase TusA HPY17_00070 PF08240 Alcohol dehydrogenase GroES-like domain HPY17_00070 PF00107 Zinc-binding dehydrogenase HPY17_00075 PF00291 Pyridoxal-phosphate dependent enzyme HPY17_00075 PF00585 C-terminal regulatory domain of Threonine dehydratase HPY17_00080 PF00920 Dehydratase family HPY17_00085 PF01063 Amino-transferase class IV HPY17_00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY17_00095 PF00205 Thiamine pyrophosphate enzyme, central domain HPY17_00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY17_00100 PF01078 Magnesium chelatase, subunit ChlI HPY17_00100 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPY17_00105 PF01553 Acyltransferase HPY17_00110 PF01323 DSBA-like thioredoxin domain HPY17_00115 PF01636 Phosphotransferase enzyme family HPY17_00120 PF13746 4Fe-4S dicluster domain HPY17_00120 PF12801 4Fe-4S binding domain HPY17_00120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HPY17_00125 PF06288 Protein of unknown function (DUF1040) HPY17_00130 PF07070 SpoOM protein HPY17_00135 PF03006 Haemolysin-III related HPY17_00145 PF02386 Cation transport protein HPY17_00150 PF02254 TrkA-N domain HPY17_00150 PF02080 TrkA-C domain HPY17_00155 PF01029 NusB family HPY17_00155 PF01189 16S rRNA methyltransferase RsmB/F HPY17_00160 PF00551 Formyl transferase HPY17_00160 PF02911 Formyl transferase, C-terminal domain HPY17_00165 PF01327 Polypeptide deformylase HPY17_00170 PF01476 LysM domain HPY17_00175 PF17782 DprA winged helix domain HPY17_00175 PF02481 DNA recombination-mediator protein A HPY17_00180 PF04361 Protein of unknown function (DUF494) HPY17_00185 PF01396 Topoisomerase DNA binding C4 zinc finger HPY17_00190 PF02222 ATP-grasp domain HPY17_00190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HPY17_00195 PF00731 AIR carboxylase HPY17_00200 PF01300 Telomere recombination HPY17_00205 PF01218 Coproporphyrinogen III oxidase HPY17_00210 PF08501 Shikimate dehydrogenase substrate binding domain HPY17_00210 PF01488 Shikimate / quinate 5-dehydrogenase HPY17_00210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HPY17_00220 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_00260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HPY17_00265 PF01964 Radical SAM ThiC family HPY17_00265 PF13667 ThiC-associated domain HPY17_00270 PF02581 Thiamine monophosphate synthase HPY17_00275 PF00899 ThiF family HPY17_00280 PF02597 ThiS family HPY17_00285 PF05690 Thiazole biosynthesis protein ThiG HPY17_00290 PF06968 Biotin and Thiamin Synthesis associated domain HPY17_00290 PF04055 Radical SAM superfamily HPY17_00295 PF00557 Metallopeptidase family M24 HPY17_00295 PF01321 Creatinase/Prolidase N-terminal domain HPY17_00295 PF01321 Creatinase/Prolidase N-terminal domain HPY17_00295 PF00557 Metallopeptidase family M24 HPY17_00300 PF03466 LysR substrate binding domain HPY17_00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_00305 PF07690 Major Facilitator Superfamily HPY17_00315 PF01037 Lrp/AsnC ligand binding domain HPY17_00320 PF08448 PAS fold HPY17_00320 PF00563 EAL domain HPY17_00320 PF00990 Diguanylate cyclase, GGDEF domain HPY17_00325 PF04445 Putative SAM-dependent methyltransferase HPY17_00335 PF00892 EamA-like transporter family HPY17_00340 PF00582 Universal stress protein family HPY17_00345 PF00210 Ferritin-like domain HPY17_00350 PF10625 Universal stress protein B (UspB) HPY17_00365 PF02646 RmuC family HPY17_00370 PF01209 ubiE/COQ5 methyltransferase family HPY17_00375 PF02036 SCP-2 sterol transfer family HPY17_00380 PF03109 ABC1 family HPY17_00385 PF02416 mttA/Hcf106 family HPY17_00390 PF02416 mttA/Hcf106 family HPY17_00395 PF00902 Sec-independent protein translocase protein (TatC) HPY17_00400 PF01554 MatE HPY17_00410 PF00717 Peptidase S24-like HPY17_00410 PF01726 LexA DNA binding domain HPY17_00415 PF01553 Acyltransferase HPY17_00420 PF01040 UbiA prenyltransferase family HPY17_00425 PF04345 Chorismate lyase HPY17_00430 PF03748 Flagellar basal body-associated protein FliL HPY17_00435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_00435 PF08447 PAS fold HPY17_00435 PF13426 PAS domain HPY17_00440 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HPY17_00440 PF01694 Rhomboid family HPY17_00445 PF00581 Rhodanese-like domain HPY17_00450 PF01026 TatD related DNase HPY17_00455 PF00490 Delta-aminolevulinic acid dehydratase HPY17_00465 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY17_00465 PF00476 DNA polymerase family A HPY17_00465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY17_00465 PF01612 3'-5' exonuclease HPY17_00470 PF01926 50S ribosome-binding GTPase HPY17_00475 PF00034 Cytochrome c HPY17_00485 PF04220 Der GTPase activator (YihI) HPY17_00490 PF10675 Protein of unknown function (DUF2489) HPY17_00495 PF04055 Radical SAM superfamily HPY17_00495 PF06969 HemN C-terminal domain HPY17_00500 PF07219 HemY protein N-terminus HPY17_00500 PF07719 Tetratricopeptide repeat HPY17_00505 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HPY17_00510 PF02602 Uroporphyrinogen-III synthase HemD HPY17_00515 PF03900 Porphobilinogen deaminase, C-terminal domain HPY17_00515 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HPY17_00520 PF12633 Adenylate cyclase NT domain HPY17_00520 PF01295 Adenylate cyclase, class-I HPY17_00525 PF01491 Frataxin-like domain HPY17_00535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPY17_00535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY17_00540 PF01678 Diaminopimelate epimerase HPY17_00545 PF04340 Protein of unknown function, DUF484 HPY17_00550 PF00589 Phage integrase family HPY17_00550 PF02899 Phage integrase, N-terminal SAM-like domain HPY17_00555 PF13419 Haloacid dehalogenase-like hydrolase HPY17_00560 PF00990 Diguanylate cyclase, GGDEF domain HPY17_00560 PF00563 EAL domain HPY17_00560 PF08495 FIST N domain HPY17_00560 PF10442 FIST C domain HPY17_00580 PF12146 Serine aminopeptidase, S33 HPY17_00585 PF01810 LysE type translocator HPY17_00590 PF08668 HDOD domain HPY17_00590 PF00563 EAL domain HPY17_00595 PF00210 Ferritin-like domain HPY17_00630 PF00448 SRP54-type protein, GTPase domain HPY17_00630 PF02881 SRP54-type protein, helical bundle domain HPY17_00635 PF00005 ABC transporter HPY17_00640 PF18075 FtsX extracellular domain HPY17_00645 PF04545 Sigma-70, region 4 HPY17_00645 PF04542 Sigma-70 region 2 HPY17_00645 PF00140 Sigma-70 factor, region 1.2 HPY17_00650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY17_00650 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_00655 PF00440 Bacterial regulatory proteins, tetR family HPY17_00665 PF05958 tRNA (Uracil-5-)-methyltransferase HPY17_00670 PF07715 TonB-dependent Receptor Plug Domain HPY17_00670 PF00593 TonB dependent receptor HPY17_00675 PF05922 Peptidase inhibitor I9 HPY17_00675 PF00082 Subtilase family HPY17_00675 PF04151 Bacterial pre-peptidase C-terminal domain HPY17_00680 PF01177 Asp/Glu/Hydantoin racemase HPY17_00745 PF00962 Adenosine/AMP deaminase HPY17_00750 PF00563 EAL domain HPY17_00750 PF00990 Diguanylate cyclase, GGDEF domain HPY17_00750 PF03707 Bacterial signalling protein N terminal repeat HPY17_00750 PF13188 PAS domain HPY17_00755 PF00072 Response regulator receiver domain HPY17_00755 PF02954 Bacterial regulatory protein, Fis family HPY17_00755 PF00158 Sigma-54 interaction domain HPY17_00760 PF00989 PAS fold HPY17_00760 PF00512 His Kinase A (phospho-acceptor) domain HPY17_00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_00770 PF03951 Glutamine synthetase, beta-Grasp domain HPY17_00770 PF00120 Glutamine synthetase, catalytic domain HPY17_00790 PF03631 Virulence factor BrkB HPY17_00795 PF02580 D-Tyr-tRNA(Tyr) deacylase HPY17_00800 PF00583 Acetyltransferase (GNAT) family HPY17_00800 PF09500 Putative thioesterase (yiiD_Cterm) HPY17_00810 PF01293 Phosphoenolpyruvate carboxykinase HPY17_00815 PF01430 Hsp33 protein HPY17_00820 PF01479 S4 domain HPY17_00825 PF11356 Type II secretion system protein C HPY17_00830 PF03958 Bacterial type II/III secretion system short domain HPY17_00830 PF00263 Bacterial type II and III secretion system protein HPY17_00835 PF00437 Type II/IV secretion system protein HPY17_00840 PF00482 Type II secretion system (T2SS), protein F HPY17_00845 PF08334 Type II secretion system (T2SS), protein G HPY17_00845 PF07963 Prokaryotic N-terminal methylation motif HPY17_00850 PF12019 Type II transport protein GspH HPY17_00855 PF02501 Type II secretion system (T2SS), protein I HPY17_00855 PF07963 Prokaryotic N-terminal methylation motif HPY17_00860 PF11612 Type II secretion system (T2SS), protein J HPY17_00860 PF07963 Prokaryotic N-terminal methylation motif HPY17_00865 PF03934 Type II secretion system (T2SS), protein K HPY17_00870 PF12693 GspL periplasmic domain HPY17_00870 PF05134 Type II secretion system (T2SS), protein L HPY17_00875 PF04612 Type II secretion system (T2SS), protein M HPY17_00880 PF01203 Type II secretion system (T2SS), protein N HPY17_00885 PF00459 Inositol monophosphatase family HPY17_00890 PF00293 NUDIX domain HPY17_00895 PF01106 NifU-like domain HPY17_00895 PF01521 Iron-sulphur cluster biosynthesis HPY17_00900 PF00156 Phosphoribosyl transferase domain HPY17_00910 PF00561 alpha/beta hydrolase fold HPY17_00920 PF00575 S1 RNA binding domain HPY17_00920 PF16921 Tex protein YqgF-like domain HPY17_00920 PF09371 Tex-like protein N-terminal domain HPY17_00920 PF17674 HHH domain HPY17_00960 PF03449 Transcription elongation factor, N-terminal HPY17_00960 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY17_00965 PF00990 Diguanylate cyclase, GGDEF domain HPY17_00965 PF17152 Periplasmic sensor domain HPY17_00970 PF00486 Transcriptional regulatory protein, C terminal HPY17_00970 PF00072 Response regulator receiver domain HPY17_00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_00975 PF00672 HAMP domain HPY17_00975 PF00512 His Kinase A (phospho-acceptor) domain HPY17_00980 PF00860 Permease family HPY17_00985 PF00270 DEAD/DEAH box helicase HPY17_00985 PF00271 Helicase conserved C-terminal domain HPY17_00985 PF17191 RecG wedge domain HPY17_00990 PF13291 ACT domain HPY17_00990 PF02824 TGS domain HPY17_00990 PF04607 Region found in RelA / SpoT proteins HPY17_00995 PF01192 RNA polymerase Rpb6 HPY17_01000 PF00625 Guanylate kinase HPY17_01005 PF02592 Putative vitamin uptake transporter HPY17_01010 PF00474 Sodium:solute symporter family HPY17_01020 PF03471 Transporter associated domain HPY17_01020 PF02080 TrkA-C domain HPY17_01020 PF00999 Sodium/hydrogen exchanger family HPY17_01025 PF00196 Bacterial regulatory proteins, luxR family HPY17_01025 PF00072 Response regulator receiver domain HPY17_01030 PF11412 Disulphide bond corrector protein DsbC HPY17_01030 PF02683 Cytochrome C biogenesis protein transmembrane region HPY17_01035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY17_01035 PF03714 Bacterial pullanase-associated domain HPY17_01035 PF18494 Pullulanase Ins domain HPY17_01035 PF17967 Pullulanase N2 domain HPY17_01035 PF11852 Domain of unknown function (DUF3372) HPY17_01040 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY17_01045 PF10415 Fumarase C C-terminus HPY17_01045 PF00206 Lyase HPY17_01050 PF17158 Membrane-associated sensor, integral membrane domain HPY17_01050 PF00990 Diguanylate cyclase, GGDEF domain HPY17_01055 PF04186 FxsA cytoplasmic membrane protein HPY17_01060 PF00588 SpoU rRNA Methylase family HPY17_01065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY17_01065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY17_01070 PF00512 His Kinase A (phospho-acceptor) domain HPY17_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_01070 PF16527 Two-component sensor protein CpxA, periplasmic domain HPY17_01070 PF00672 HAMP domain HPY17_01075 PF00486 Transcriptional regulatory protein, C terminal HPY17_01075 PF00072 Response regulator receiver domain HPY17_01085 PF16916 Dimerisation domain of Zinc Transporter HPY17_01085 PF01545 Cation efflux family HPY17_01090 PF00365 Phosphofructokinase HPY17_01095 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HPY17_01100 PF06005 Cell division protein ZapB HPY17_01105 PF02219 Methylenetetrahydrofolate reductase HPY17_01110 PF03447 Homoserine dehydrogenase, NAD binding domain HPY17_01110 PF00742 Homoserine dehydrogenase HPY17_01110 PF00696 Amino acid kinase family HPY17_01115 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY17_01120 PF01340 Met Apo-repressor, MetJ HPY17_01125 PF03949 Malic enzyme, NAD binding domain HPY17_01125 PF00390 Malic enzyme, N-terminal domain HPY17_01130 PF01197 Ribosomal protein L31 HPY17_01135 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPY17_01135 PF00270 DEAD/DEAH box helicase HPY17_01135 PF00271 Helicase conserved C-terminal domain HPY17_01135 PF17764 3′ DNA-binding domain (3′BD) HPY17_01135 PF18074 Primosomal protein N C-terminal domain HPY17_01140 PF00356 Bacterial regulatory proteins, lacI family HPY17_01145 PF05036 Sporulation related domain HPY17_01150 PF00227 Proteasome subunit HPY17_01155 PF10431 C-terminal, D2-small domain, of ClpB protein HPY17_01155 PF00004 ATPase family associated with various cellular activities (AAA) HPY17_01155 PF07724 AAA domain (Cdc48 subfamily) HPY17_01160 PF01040 UbiA prenyltransferase family HPY17_01165 PF03737 Aldolase/RraA HPY17_01170 PF01554 MatE HPY17_01175 PF00121 Triosephosphate isomerase HPY17_01195 PF00455 DeoR C terminal sensor domain HPY17_01195 PF08220 DeoR-like helix-turn-helix domain HPY17_01200 PF00166 Chaperonin 10 Kd subunit HPY17_01205 PF00118 TCP-1/cpn60 chaperonin family HPY17_01215 PF04055 Radical SAM superfamily HPY17_01220 PF09285 Elongation factor P, C-terminal HPY17_01220 PF01132 Elongation factor P (EF-P) OB domain HPY17_01220 PF08207 Elongation factor P (EF-P) KOW-like domain HPY17_01225 PF02313 Fumarate reductase subunit D HPY17_01230 PF02300 Fumarate reductase subunit C HPY17_01235 PF13183 4Fe-4S dicluster domain HPY17_01235 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY17_01240 PF00890 FAD binding domain HPY17_01240 PF02910 Fumarate reductase flavoprotein C-term HPY17_01245 PF00152 tRNA synthetases class II (D, K and N) HPY17_01250 PF00581 Rhodanese-like domain HPY17_01255 PF02556 Preprotein translocase subunit SecB HPY17_01260 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPY17_01260 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPY17_01265 PF06426 Serine acetyltransferase, N-terminal HPY17_01265 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_01275 PF00311 Phosphoenolpyruvate carboxylase HPY17_01280 PF01546 Peptidase family M20/M25/M40 HPY17_01280 PF07687 Peptidase dimerisation domain HPY17_01285 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY17_01285 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY17_01290 PF00696 Amino acid kinase family HPY17_01295 PF00764 Arginosuccinate synthase HPY17_01300 PF00206 Lyase HPY17_01300 PF14698 Argininosuccinate lyase C-terminal HPY17_01310 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_01310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY17_01315 PF08534 Redoxin HPY17_01315 PF00462 Glutaredoxin HPY17_01320 PF03466 LysR substrate binding domain HPY17_01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_01325 PF17092 Penicillin-binding protein OB-like domain HPY17_01325 PF00912 Transglycosylase HPY17_01325 PF00905 Penicillin binding protein transpeptidase domain HPY17_01350 PF07660 Secretin and TonB N terminus short domain HPY17_01350 PF03958 Bacterial type II/III secretion system short domain HPY17_01350 PF00263 Bacterial type II and III secretion system protein HPY17_01350 PF11741 AMIN domain HPY17_01355 PF01202 Shikimate kinase HPY17_01360 PF01761 3-dehydroquinate synthase HPY17_01370 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPY17_01375 PF00834 Ribulose-phosphate 3 epimerase family HPY17_01380 PF13419 Haloacid dehalogenase-like hydrolase HPY17_01385 PF00579 tRNA synthetases class I (W and Y) HPY17_01405 PF00919 Uncharacterized protein family UPF0004 HPY17_01405 PF18693 TRAM domain HPY17_01405 PF04055 Radical SAM superfamily HPY17_01410 PF00117 Glutamine amidotransferase class-I HPY17_01415 PF00202 Aminotransferase class-III HPY17_01420 PF04958 Arginine N-succinyltransferase beta subunit HPY17_01425 PF00171 Aldehyde dehydrogenase family HPY17_01435 PF00027 Cyclic nucleotide-binding domain HPY17_01435 PF13545 Crp-like helix-turn-helix domain HPY17_01440 PF00485 Phosphoribulokinase / Uridine kinase family HPY17_01445 PF06794 Uncharacterised protein family (UPF0270) HPY17_01450 PF00561 alpha/beta hydrolase fold HPY17_01460 PF12848 ABC transporter HPY17_01460 PF00005 ABC transporter HPY17_01465 PF02525 Flavodoxin-like fold HPY17_01470 PF00999 Sodium/hydrogen exchanger family HPY17_01470 PF02254 TrkA-N domain HPY17_01480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY17_01485 PF01112 Asparaginase HPY17_01490 PF00709 Adenylosuccinate synthetase HPY17_01495 PF08238 Sel1 repeat HPY17_01500 PF11893 Domain of unknown function (DUF3413) HPY17_01500 PF00884 Sulfatase HPY17_01505 PF00773 RNB domain HPY17_01505 PF08206 Ribonuclease B OB domain HPY17_01505 PF08461 Ribonuclease R winged-helix domain HPY17_01505 PF00575 S1 RNA binding domain HPY17_01505 PF17876 Cold shock domain HPY17_01510 PF00588 SpoU rRNA Methylase family HPY17_01510 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY17_01515 PF00338 Ribosomal protein S10p/S20e HPY17_01520 PF00297 Ribosomal protein L3 HPY17_01525 PF00573 Ribosomal protein L4/L1 family HPY17_01530 PF00276 Ribosomal protein L23 HPY17_01535 PF00181 Ribosomal Proteins L2, RNA binding domain HPY17_01535 PF03947 Ribosomal Proteins L2, C-terminal domain HPY17_01540 PF00203 Ribosomal protein S19 HPY17_01545 PF00237 Ribosomal protein L22p/L17e HPY17_01550 PF07650 KH domain HPY17_01550 PF00189 Ribosomal protein S3, C-terminal domain HPY17_01555 PF00252 Ribosomal protein L16p/L10e HPY17_01560 PF00831 Ribosomal L29 protein HPY17_01565 PF00366 Ribosomal protein S17 HPY17_01570 PF00238 Ribosomal protein L14p/L23e HPY17_01575 PF00467 KOW motif HPY17_01575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPY17_01580 PF00673 ribosomal L5P family C-terminus HPY17_01580 PF00281 Ribosomal protein L5 HPY17_01585 PF00253 Ribosomal protein S14p/S29e HPY17_01590 PF00410 Ribosomal protein S8 HPY17_01595 PF00347 Ribosomal protein L6 HPY17_01600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPY17_01605 PF00333 Ribosomal protein S5, N-terminal domain HPY17_01605 PF03719 Ribosomal protein S5, C-terminal domain HPY17_01610 PF00327 Ribosomal protein L30p/L7e HPY17_01615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPY17_01620 PF00344 SecY translocase HPY17_01625 PF00444 Ribosomal protein L36 HPY17_01630 PF00416 Ribosomal protein S13/S18 HPY17_01635 PF00411 Ribosomal protein S11 HPY17_01640 PF00163 Ribosomal protein S4/S9 N-terminal domain HPY17_01640 PF01479 S4 domain HPY17_01645 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPY17_01645 PF01000 RNA polymerase Rpb3/RpoA insert domain HPY17_01645 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPY17_01650 PF01196 Ribosomal protein L17 HPY17_01660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY17_01660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY17_01665 PF08525 Opacity-associated protein A N-terminal motif HPY17_01665 PF04225 Opacity-associated protein A LysM-like domain HPY17_01670 PF00892 EamA-like transporter family HPY17_01675 PF13673 Acetyltransferase (GNAT) domain HPY17_01680 PF00271 Helicase conserved C-terminal domain HPY17_01680 PF03880 DbpA RNA binding domain HPY17_01680 PF00270 DEAD/DEAH box helicase HPY17_01690 PF02872 5'-nucleotidase, C-terminal domain HPY17_01690 PF00149 Calcineurin-like phosphoesterase HPY17_01695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY17_01695 PF14824 Sirohaem biosynthesis protein central HPY17_01695 PF10414 Sirohaem synthase dimerisation region HPY17_01700 PF01507 Phosphoadenosine phosphosulfate reductase family HPY17_01705 PF00009 Elongation factor Tu GTP binding domain HPY17_01730 PF00005 ABC transporter HPY17_01740 PF10795 Protein of unknown function (DUF2607) HPY17_01745 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HPY17_01750 PF01625 Peptide methionine sulfoxide reductase HPY17_01755 PF01103 Surface antigen HPY17_01755 PF07244 Surface antigen variable number repeat HPY17_01755 PF17243 POTRA domain TamA domain 1 HPY17_01760 PF04357 TamB, inner membrane protein subunit of TAM complex HPY17_01765 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HPY17_01770 PF00719 Inorganic pyrophosphatase HPY17_01775 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HPY17_01780 PF01225 Mur ligase family, catalytic domain HPY17_01780 PF02875 Mur ligase family, glutamate ligase domain HPY17_01780 PF08245 Mur ligase middle domain HPY17_01785 PF02441 Flavoprotein HPY17_01795 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_01800 PF00005 ABC transporter HPY17_01805 PF04751 Protein of unknown function (DUF615) HPY17_01810 PF01523 Putative modulator of DNA gyrase HPY17_01815 PF03448 MgtE intracellular N domain HPY17_01815 PF01769 Divalent cation transporter HPY17_01815 PF00571 CBS domain HPY17_01820 PF00381 PTS HPr component phosphorylation site HPY17_01825 PF03668 P-loop ATPase protein family HPY17_01830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY17_01835 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY17_01840 PF04552 Sigma-54, DNA binding domain HPY17_01840 PF04963 Sigma-54 factor, core binding domain HPY17_01840 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPY17_01845 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPY17_01845 PF00005 ABC transporter HPY17_01850 PF03968 OstA-like protein HPY17_01865 PF00571 CBS domain HPY17_01865 PF01380 SIS domain HPY17_01870 PF01699 Sodium/calcium exchanger protein HPY17_01875 PF00005 ABC transporter HPY17_01880 PF02405 Permease MlaE HPY17_01885 PF02470 MlaD protein HPY17_01890 PF05494 MlaC protein HPY17_01900 PF01722 BolA-like protein HPY17_01905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY17_01910 PF01553 Acyltransferase HPY17_01915 PF01042 Endoribonuclease L-PSP HPY17_01920 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HPY17_01920 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HPY17_01925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY17_01925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY17_01930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY17_01930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY17_01935 PF02562 PhoH-like protein HPY17_01935 PF13638 PIN domain HPY17_01940 PF00271 Helicase conserved C-terminal domain HPY17_01940 PF12137 RNA polymerase recycling family C-terminal HPY17_01940 PF00176 SNF2 family N-terminal domain HPY17_01940 PF18339 RapA N-terminal Tudor like domain 1 HPY17_01940 PF18337 RapA N-terminal Tudor like domain HPY17_01945 PF00849 RNA pseudouridylate synthase HPY17_01950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY17_01950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY17_01955 PF10458 Valyl tRNA synthetase tRNA binding arm HPY17_01955 PF00133 tRNA synthetases class I (I, L, M and V) HPY17_01955 PF08264 Anticodon-binding domain of tRNA HPY17_01960 PF04364 DNA polymerase III chi subunit, HolC HPY17_01965 PF00883 Cytosol aminopeptidase family, catalytic domain HPY17_01965 PF02789 Cytosol aminopeptidase family, N-terminal domain HPY17_01970 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY17_01975 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY17_01990 PF00072 Response regulator receiver domain HPY17_02030 PF00694 Aconitase C-terminal domain HPY17_02035 PF00330 Aconitase family (aconitate hydratase) HPY17_02040 PF00180 Isocitrate/isopropylmalate dehydrogenase HPY17_02045 PF00682 HMGL-like HPY17_02045 PF08502 LeuA allosteric (dimerisation) domain HPY17_02050 PF01569 PAP2 superfamily HPY17_02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_02060 PF03466 LysR substrate binding domain HPY17_02065 PF00501 AMP-binding enzyme HPY17_02070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY17_02070 PF00205 Thiamine pyrophosphate enzyme, central domain HPY17_02070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY17_02075 PF10369 Small subunit of acetolactate synthase HPY17_02080 PF01609 Transposase DDE domain HPY17_02080 PF13006 Insertion element 4 transposase N-terminal HPY17_02085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY17_02085 PF01842 ACT domain HPY17_02085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY17_02090 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HPY17_02095 PF01812 5-formyltetrahydrofolate cyclo-ligase family HPY17_02105 PF05164 Cell division protein ZapA HPY17_02110 PF03695 Uncharacterised protein family (UPF0149) HPY17_02115 PF01494 FAD binding domain HPY17_02120 PF01494 FAD binding domain HPY17_02135 PF03937 Flavinator of succinate dehydrogenase HPY17_02145 PF02910 Fumarate reductase flavoprotein C-term HPY17_02145 PF00890 FAD binding domain HPY17_02150 PF04542 Sigma-70 region 2 HPY17_02150 PF08281 Sigma-70, region 4 HPY17_02155 PF03873 Anti sigma-E protein RseA, C-terminal domain HPY17_02155 PF03872 Anti sigma-E protein RseA, N-terminal domain HPY17_02160 PF03888 MucB/RseB N-terminal domain HPY17_02160 PF17188 MucB/RseB C-terminal domain HPY17_02170 PF00009 Elongation factor Tu GTP binding domain HPY17_02170 PF06421 GTP-binding protein LepA C-terminus HPY17_02170 PF03144 Elongation factor Tu domain 2 HPY17_02170 PF00679 Elongation factor G C-terminus HPY17_02175 PF10502 Signal peptidase, peptidase S26 HPY17_02180 PF00035 Double-stranded RNA binding motif HPY17_02180 PF14622 Ribonuclease-III-like HPY17_02185 PF01926 50S ribosome-binding GTPase HPY17_02185 PF07650 KH domain HPY17_02190 PF11967 Recombination protein O N terminal HPY17_02190 PF02565 Recombination protein O C terminal HPY17_02195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HPY17_02200 PF01648 4'-phosphopantetheinyl transferase superfamily HPY17_02215 PF00990 Diguanylate cyclase, GGDEF domain HPY17_02220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY17_02220 PF00072 Response regulator receiver domain HPY17_02220 PF01627 Hpt domain HPY17_02220 PF00512 His Kinase A (phospho-acceptor) domain HPY17_02220 PF00672 HAMP domain HPY17_02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_02225 PF01938 TRAM domain HPY17_02225 PF05958 tRNA (Uracil-5-)-methyltransferase HPY17_02230 PF04607 Region found in RelA / SpoT proteins HPY17_02230 PF02824 TGS domain HPY17_02230 PF13291 ACT domain HPY17_02235 PF03819 MazG nucleotide pyrophosphohydrolase domain HPY17_02240 PF06418 CTP synthase N-terminus HPY17_02240 PF00117 Glutamine amidotransferase class-I HPY17_02245 PF03952 Enolase, N-terminal domain HPY17_02245 PF00113 Enolase, C-terminal TIM barrel domain HPY17_02250 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY17_02250 PF01743 Poly A polymerase head domain HPY17_02250 PF01966 HD domain HPY17_02255 PF13401 AAA domain HPY17_02255 PF01471 Putative peptidoglycan binding domain HPY17_02265 PF08239 Bacterial SH3 domain HPY17_02270 PF01384 Phosphate transporter family HPY17_02275 PF01865 Protein of unknown function DUF47 HPY17_02280 PF01928 CYTH domain HPY17_02285 PF02743 Cache domain HPY17_02285 PF00672 HAMP domain HPY17_02285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_02290 PF08335 GlnD PII-uridylyltransferase HPY17_02290 PF03710 Glutamate-ammonia ligase adenylyltransferase HPY17_02295 PF00294 pfkB family carbohydrate kinase HPY17_02295 PF01467 Cytidylyltransferase-like HPY17_02300 PF02321 Outer membrane efflux protein HPY17_02305 PF00293 NUDIX domain HPY17_02310 PF06853 Protein of unknown function (DUF1249) HPY17_02315 PF00149 Calcineurin-like phosphoesterase HPY17_02320 PF05728 Uncharacterised protein family (UPF0227) HPY17_02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_02325 PF00204 DNA gyrase B HPY17_02325 PF00986 DNA gyrase B subunit, carboxyl terminus HPY17_02325 PF01751 Toprim domain HPY17_02330 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY17_02330 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY17_02335 PF03884 DNA gyrase inhibitor YacG HPY17_02340 PF07072 Cell division protein HPY17_02345 PF01121 Dephospho-CoA kinase HPY17_02350 PF06750 Bacterial Peptidase A24 N-terminal domain HPY17_02350 PF01478 Type IV leader peptidase family HPY17_02355 PF00482 Type II secretion system (T2SS), protein F HPY17_02360 PF00437 Type II/IV secretion system protein HPY17_02360 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HPY17_02365 PF00114 Pilin (bacterial filament) HPY17_02365 PF07963 Prokaryotic N-terminal methylation motif HPY17_02370 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HPY17_02370 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HPY17_02375 PF01510 N-acetylmuramoyl-L-alanine amidase HPY17_02380 PF00258 Flavodoxin HPY17_02385 PF00589 Phage integrase family HPY17_02385 PF02899 Phage integrase, N-terminal SAM-like domain HPY17_02390 PF10411 Disulfide bond isomerase protein N-terminus HPY17_02390 PF13098 Thioredoxin-like domain HPY17_02395 PF02272 DHHA1 domain HPY17_02395 PF17768 RecJ OB domain HPY17_02395 PF01368 DHH family HPY17_02400 PF00392 Bacterial regulatory proteins, gntR family HPY17_02400 PF07729 FCD domain HPY17_02405 PF00456 Transketolase, thiamine diphosphate binding domain HPY17_02405 PF17831 Pyruvate dehydrogenase E1 component middle domain HPY17_02410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY17_02410 PF02817 e3 binding domain HPY17_02410 PF00364 Biotin-requiring enzyme HPY17_02415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY17_02415 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_02425 PF01795 MraW methylase family HPY17_02430 PF04999 Cell division protein FtsL HPY17_02435 PF00905 Penicillin binding protein transpeptidase domain HPY17_02435 PF03717 Penicillin-binding Protein dimerisation domain HPY17_02440 PF08245 Mur ligase middle domain HPY17_02440 PF02875 Mur ligase family, glutamate ligase domain HPY17_02440 PF01225 Mur ligase family, catalytic domain HPY17_02445 PF02875 Mur ligase family, glutamate ligase domain HPY17_02445 PF08245 Mur ligase middle domain HPY17_02445 PF01225 Mur ligase family, catalytic domain HPY17_02450 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HPY17_02450 PF00953 Glycosyl transferase family 4 HPY17_02455 PF08245 Mur ligase middle domain HPY17_02455 PF02875 Mur ligase family, glutamate ligase domain HPY17_02460 PF01098 Cell cycle protein HPY17_02465 PF04101 Glycosyltransferase family 28 C-terminal domain HPY17_02465 PF03033 Glycosyltransferase family 28 N-terminal domain HPY17_02470 PF08245 Mur ligase middle domain HPY17_02470 PF02875 Mur ligase family, glutamate ligase domain HPY17_02470 PF01225 Mur ligase family, catalytic domain HPY17_02475 PF08478 POTRA domain, FtsQ-type HPY17_02475 PF03799 Cell division protein FtsQ HPY17_02480 PF02491 SHS2 domain inserted in FTSA HPY17_02485 PF12327 FtsZ family, C-terminal domain HPY17_02485 PF00091 Tubulin/FtsZ family, GTPase domain HPY17_02490 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HPY17_02500 PF01043 SecA preprotein cross-linking domain HPY17_02500 PF07516 SecA Wing and Scaffold domain HPY17_02500 PF02810 SEC-C motif HPY17_02500 PF07517 SecA DEAD-like domain HPY17_02505 PF00293 NUDIX domain HPY17_02510 PF05173 Dihydrodipicolinate reductase, C-terminus HPY17_02510 PF01113 Dihydrodipicolinate reductase, N-terminus HPY17_02520 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HPY17_02520 PF00117 Glutamine amidotransferase class-I HPY17_02525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY17_02525 PF02142 MGS-like domain HPY17_02525 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HPY17_02540 PF01925 Sulfite exporter TauE/SafE HPY17_02545 PF03466 LysR substrate binding domain HPY17_02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_02550 PF03458 UPF0126 domain HPY17_02555 PF01497 Periplasmic binding protein HPY17_02565 PF01048 Phosphorylase superfamily HPY17_02575 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_02575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY17_02580 PF04898 Glutamate synthase central domain HPY17_02580 PF00310 Glutamine amidotransferases class-II HPY17_02580 PF01645 Conserved region in glutamate synthase HPY17_02580 PF01493 GXGXG motif HPY17_02585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY17_02585 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_02590 PF01645 Conserved region in glutamate synthase HPY17_02590 PF00310 Glutamine amidotransferases class-II HPY17_02590 PF04898 Glutamate synthase central domain HPY17_02590 PF01493 GXGXG motif HPY17_02595 PF16199 Radical_SAM C-terminal domain HPY17_02595 PF04055 Radical SAM superfamily HPY17_02600 PF00563 EAL domain HPY17_02600 PF00360 Phytochrome region HPY17_02600 PF00990 Diguanylate cyclase, GGDEF domain HPY17_02600 PF01590 GAF domain HPY17_02605 PF00072 Response regulator receiver domain HPY17_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_02605 PF18415 Histidine kinase receptor ArcB trans-membrane domain HPY17_02605 PF00512 His Kinase A (phospho-acceptor) domain HPY17_02605 PF01627 Hpt domain HPY17_02605 PF00989 PAS fold HPY17_02610 PF00072 Response regulator receiver domain HPY17_02610 PF00486 Transcriptional regulatory protein, C terminal HPY17_02620 PF03737 Aldolase/RraA HPY17_02635 PF00696 Amino acid kinase family HPY17_02635 PF01842 ACT domain HPY17_02635 PF13840 ACT domain HPY17_02635 PF00742 Homoserine dehydrogenase HPY17_02635 PF03447 Homoserine dehydrogenase, NAD binding domain HPY17_02640 PF00288 GHMP kinases N terminal domain HPY17_02640 PF08544 GHMP kinases C terminal HPY17_02645 PF00291 Pyridoxal-phosphate dependent enzyme HPY17_02645 PF14821 Threonine synthase N terminus HPY17_02650 PF01228 Glycine radical HPY17_02655 PF01261 Xylose isomerase-like TIM barrel HPY17_02660 PF03167 Uracil DNA glycosylase superfamily HPY17_02675 PF01235 Sodium:alanine symporter family HPY17_02680 PF03883 Peroxide stress protein YaaA HPY17_02690 PF01026 TatD related DNase HPY17_02695 PF07670 Nucleoside recognition HPY17_02695 PF07662 Na+ dependent nucleoside transporter C-terminus HPY17_02695 PF01773 Na+ dependent nucleoside transporter N-terminus HPY17_02705 PF01791 DeoC/LacD family aldolase HPY17_02710 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HPY17_02710 PF00591 Glycosyl transferase family, a/b domain HPY17_02710 PF02885 Glycosyl transferase family, helical bundle domain HPY17_02715 PF01676 Metalloenzyme superfamily HPY17_02720 PF01048 Phosphorylase superfamily HPY17_02730 PF18429 Domain of unknown function (DUF5609) HPY17_02740 PF18073 Rubredoxin metal binding domain HPY17_02745 PF14492 Elongation Factor G, domain II HPY17_02745 PF03764 Elongation factor G, domain IV HPY17_02745 PF00009 Elongation factor Tu GTP binding domain HPY17_02745 PF00679 Elongation factor G C-terminus HPY17_02745 PF03144 Elongation factor Tu domain 2 HPY17_02750 PF00501 AMP-binding enzyme HPY17_02755 PF00072 Response regulator receiver domain HPY17_02765 PF16353 Domain of unknown function(DUF4981) HPY17_02765 PF00703 Glycosyl hydrolases family 2 HPY17_02765 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HPY17_02765 PF02837 Glycosyl hydrolases family 2, sugar binding domain HPY17_02765 PF02929 Beta galactosidase small chain HPY17_02770 PF00356 Bacterial regulatory proteins, lacI family HPY17_02775 PF01588 Putative tRNA binding domain HPY17_02785 PF01544 CorA-like Mg2+ transporter protein HPY17_02790 PF08443 RimK-like ATP-grasp domain HPY17_02790 PF18030 RimK PreATP-grasp domain HPY17_02790 PF02080 TrkA-C domain HPY17_02795 PF00583 Acetyltransferase (GNAT) family HPY17_02805 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HPY17_02805 PF14602 Hexapeptide repeat of succinyl-transferase HPY17_02810 PF07130 YebG protein HPY17_02825 PF17946 RecC C-terminal domain HPY17_02830 PF13361 UvrD-like helicase C-terminal domain HPY17_02830 PF00580 UvrD/REP helicase N-terminal domain HPY17_02830 PF12705 PD-(D/E)XK nuclease superfamily HPY17_02835 PF13538 UvrD-like helicase C-terminal domain HPY17_02845 PF00583 Acetyltransferase (GNAT) family HPY17_02845 PF00696 Amino acid kinase family HPY17_02855 PF03562 MltA specific insert domain HPY17_02855 PF06725 3D domain HPY17_02860 PF00899 ThiF family HPY17_02865 PF02657 Fe-S metabolism associated domain HPY17_02870 PF00266 Aminotransferase class-V HPY17_02875 PF01965 DJ-1/PfpI family HPY17_02880 PF08546 Ketopantoate reductase PanE/ApbA C terminal HPY17_02880 PF02558 Ketopantoate reductase PanE/ApbA HPY17_02885 PF03502 Nucleoside-specific channel-forming protein, Tsx HPY17_02895 PF04542 Sigma-70 region 2 HPY17_02895 PF04545 Sigma-70, region 4 HPY17_02905 PF07690 Major Facilitator Superfamily HPY17_02910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY17_02920 PF05175 Methyltransferase small domain HPY17_02925 PF01722 BolA-like protein HPY17_02930 PF11973 NQRA C-terminal domain HPY17_02930 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HPY17_02935 PF03116 NQR2, RnfD, RnfE family HPY17_02940 PF04205 FMN-binding domain HPY17_02945 PF02508 Rnf-Nqr subunit, membrane protein HPY17_02950 PF02508 Rnf-Nqr subunit, membrane protein HPY17_02955 PF00175 Oxidoreductase NAD-binding domain HPY17_02955 PF00970 Oxidoreductase FAD-binding domain HPY17_02955 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY17_02960 PF02424 ApbE family HPY17_02970 PF11798 IMS family HHH motif HPY17_02970 PF00817 impB/mucB/samB family HPY17_02980 PF00990 Diguanylate cyclase, GGDEF domain HPY17_02980 PF17158 Membrane-associated sensor, integral membrane domain HPY17_02985 PF00209 Sodium:neurotransmitter symporter family HPY17_02995 PF08443 RimK-like ATP-grasp domain HPY17_02995 PF18030 RimK PreATP-grasp domain HPY17_03000 PF08443 RimK-like ATP-grasp domain HPY17_03000 PF18030 RimK PreATP-grasp domain HPY17_03005 PF07687 Peptidase dimerisation domain HPY17_03005 PF01546 Peptidase family M20/M25/M40 HPY17_03010 PF00860 Permease family HPY17_03015 PF00156 Phosphoribosyl transferase domain HPY17_03025 PF07417 Sigma factor-binding transcriptional regulator Crl HPY17_03030 PF01472 PUA domain HPY17_03030 PF00696 Amino acid kinase family HPY17_03035 PF00171 Aldehyde dehydrogenase family HPY17_03040 PF03477 ATP cone domain HPY17_03045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY17_03045 PF01872 RibD C-terminal domain HPY17_03050 PF00677 Lumazine binding domain HPY17_03055 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY17_03055 PF00925 GTP cyclohydrolase II HPY17_03060 PF00885 6,7-dimethyl-8-ribityllumazine synthase HPY17_03065 PF01029 NusB family HPY17_03070 PF00586 AIR synthase related protein, N-terminal domain HPY17_03070 PF02769 AIR synthase related protein, C-terminal domain HPY17_03075 PF04608 Phosphatidylglycerophosphatase A HPY17_03080 PF11944 Protein of unknown function (DUF3461) HPY17_03085 PF01909 Nucleotidyltransferase domain HPY17_03085 PF01966 HD domain HPY17_03085 PF08335 GlnD PII-uridylyltransferase HPY17_03090 PF00557 Metallopeptidase family M24 HPY17_03095 PF00318 Ribosomal protein S2 HPY17_03100 PF00889 Elongation factor TS HPY17_03105 PF00696 Amino acid kinase family HPY17_03110 PF01765 Ribosome recycling factor HPY17_03115 PF01255 Putative undecaprenyl diphosphate synthase HPY17_03125 PF13288 DXP reductoisomerase C-terminal domain HPY17_03125 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPY17_03125 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPY17_03130 PF17820 PDZ domain HPY17_03130 PF02163 Peptidase family M50 HPY17_03135 PF01103 Surface antigen HPY17_03135 PF07244 Surface antigen variable number repeat HPY17_03140 PF03938 Outer membrane protein (OmpH-like) HPY17_03145 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_03145 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPY17_03150 PF07977 FabA-like domain HPY17_03155 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_03155 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HPY17_03160 PF02684 Lipid-A-disaccharide synthetase HPY17_03165 PF01351 Ribonuclease HII HPY17_03170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPY17_03170 PF01336 OB-fold nucleic acid binding domain HPY17_03170 PF02811 PHP domain HPY17_03170 PF14579 Helix-hairpin-helix motif HPY17_03170 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPY17_03175 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HPY17_03180 PF11734 TilS substrate C-terminal domain HPY17_03180 PF09179 TilS substrate binding domain HPY17_03180 PF01171 PP-loop family HPY17_03185 PF00034 Cytochrome c HPY17_03190 PF05870 Phenolic acid decarboxylase (PAD) HPY17_03195 PF00543 Nitrogen regulatory protein P-II HPY17_03200 PF03372 Endonuclease/Exonuclease/phosphatase family HPY17_03205 PF01476 LysM domain HPY17_03205 PF01464 Transglycosylase SLT domain HPY17_03210 PF00753 Metallo-beta-lactamase superfamily HPY17_03210 PF16123 Hydroxyacylglutathione hydrolase C-terminus HPY17_03215 PF08241 Methyltransferase domain HPY17_03220 PF00075 RNase H HPY17_03225 PF00929 Exonuclease HPY17_03235 PF09317 Domain of unknown function (DUF1974) HPY17_03235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY17_03235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY17_03235 PF02770 Acyl-CoA dehydrogenase, middle domain HPY17_03240 PF13580 SIS domain HPY17_03245 PF13230 Glutamine amidotransferases class-II HPY17_03250 PF00551 Formyl transferase HPY17_03255 PF00586 AIR synthase related protein, N-terminal domain HPY17_03255 PF02769 AIR synthase related protein, C-terminal domain HPY17_03265 PF00990 Diguanylate cyclase, GGDEF domain HPY17_03265 PF08448 PAS fold HPY17_03270 PF01479 S4 domain HPY17_03270 PF00849 RNA pseudouridylate synthase HPY17_03275 PF01713 Smr domain HPY17_03290 PF01963 TraB family HPY17_03295 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HPY17_03295 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY17_03295 PF03173 Putative carbohydrate binding domain HPY17_03295 PF02838 Glycosyl hydrolase family 20, domain 2 HPY17_03305 PF00403 Heavy-metal-associated domain HPY17_03310 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY17_03315 PF01389 OmpA-like transmembrane domain HPY17_03315 PF00691 OmpA family HPY17_03325 PF07715 TonB-dependent Receptor Plug Domain HPY17_03330 PF04954 Siderophore-interacting protein HPY17_03330 PF08021 Siderophore-interacting FAD-binding domain HPY17_03335 PF00501 AMP-binding enzyme HPY17_03335 PF00550 Phosphopantetheine attachment site HPY17_03335 PF08242 Methyltransferase domain HPY17_03335 PF00668 Condensation domain HPY17_03370 PF00072 Response regulator receiver domain HPY17_03370 PF01584 CheW-like domain HPY17_03375 PF03705 CheR methyltransferase, all-alpha domain HPY17_03375 PF01739 CheR methyltransferase, SAM binding domain HPY17_03380 PF00460 Flagella basal body rod protein HPY17_03385 PF00460 Flagella basal body rod protein HPY17_03385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY17_03390 PF03963 Flagellar hook capping protein - N-terminal region HPY17_03390 PF13860 FlgD Ig-like domain HPY17_03390 PF13861 FlgD Tudor-like domain HPY17_03395 PF00460 Flagella basal body rod protein HPY17_03395 PF07559 Flagellar basal body protein FlaE HPY17_03395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY17_03400 PF00460 Flagella basal body rod protein HPY17_03400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY17_03405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY17_03405 PF00460 Flagella basal body rod protein HPY17_03410 PF02107 Flagellar L-ring protein HPY17_03415 PF02119 Flagellar P-ring protein HPY17_03420 PF10135 Rod binding protein HPY17_03420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HPY17_03425 PF07196 Flagellin hook IN motif HPY17_03425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY17_03435 PF07196 Flagellin hook IN motif HPY17_03435 PF00669 Bacterial flagellin N-terminal helical region HPY17_03435 PF00700 Bacterial flagellin C-terminal helical region HPY17_03440 PF00669 Bacterial flagellin N-terminal helical region HPY17_03440 PF00700 Bacterial flagellin C-terminal helical region HPY17_03440 PF07196 Flagellin hook IN motif HPY17_03525 PF01926 50S ribosome-binding GTPase HPY17_03525 PF06071 Protein of unknown function (DUF933) HPY17_03530 PF01195 Peptidyl-tRNA hydrolase HPY17_03535 PF14572 Phosphoribosyl synthetase-associated domain HPY17_03535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPY17_03540 PF08544 GHMP kinases C terminal HPY17_03540 PF00288 GHMP kinases N terminal domain HPY17_03545 PF03550 Outer membrane lipoprotein LolB HPY17_03550 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HPY17_03550 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HPY17_03550 PF01488 Shikimate / quinate 5-dehydrogenase HPY17_03555 PF00472 RF-1 domain HPY17_03555 PF03462 PCRF domain HPY17_03560 PF17827 PrmC N-terminal domain HPY17_03560 PF13847 Methyltransferase domain HPY17_03565 PF04247 Invasion gene expression up-regulator, SirB HPY17_03570 PF13369 Transglutaminase-like superfamily HPY17_03575 PF00793 DAHP synthetase I family HPY17_03580 PF00149 Calcineurin-like phosphoesterase HPY17_03580 PF02872 5'-nucleotidase, C-terminal domain HPY17_03585 PF04073 Aminoacyl-tRNA editing domain HPY17_03590 PF00860 Permease family HPY17_03605 PF03358 NADPH-dependent FMN reductase HPY17_03610 PF03960 ArsC family HPY17_03615 PF13181 Tetratricopeptide repeat HPY17_03615 PF01435 Peptidase family M48 HPY17_03625 PF01594 AI-2E family transporter HPY17_03630 PF00672 HAMP domain HPY17_03630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_03630 PF02743 Cache domain HPY17_03635 PF00578 AhpC/TSA family HPY17_03645 PF00701 Dihydrodipicolinate synthetase family HPY17_03650 PF06804 NlpB/DapX lipoprotein HPY17_03660 PF02557 D-alanyl-D-alanine carboxypeptidase HPY17_03665 PF01546 Peptidase family M20/M25/M40 HPY17_03665 PF07687 Peptidase dimerisation domain HPY17_03670 PF03960 ArsC family HPY17_03685 PF11143 Protein of unknown function (DUF2919) HPY17_03690 PF04261 Dyp-type peroxidase family HPY17_03695 PF10282 Lactonase, 7-bladed beta-propeller HPY17_03700 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY17_03700 PF02838 Glycosyl hydrolase family 20, domain 2 HPY17_03705 PF01081 KDPG and KHG aldolase HPY17_03710 PF00294 pfkB family carbohydrate kinase HPY17_03715 PF00474 Sodium:solute symporter family HPY17_03725 PF07969 Amidohydrolase family HPY17_03735 PF02685 Glucokinase HPY17_03735 PF01418 Helix-turn-helix domain, rpiR family HPY17_03735 PF01380 SIS domain HPY17_03740 PF00700 Bacterial flagellin C-terminal helical region HPY17_03740 PF07196 Flagellin hook IN motif HPY17_03740 PF00669 Bacterial flagellin N-terminal helical region HPY17_03745 PF00669 Bacterial flagellin N-terminal helical region HPY17_03745 PF07196 Flagellin hook IN motif HPY17_03745 PF00700 Bacterial flagellin C-terminal helical region HPY17_03750 PF00669 Bacterial flagellin N-terminal helical region HPY17_03750 PF07196 Flagellin hook IN motif HPY17_03750 PF00700 Bacterial flagellin C-terminal helical region HPY17_03755 PF03646 FlaG protein HPY17_03760 PF02465 Flagellar hook-associated protein 2 N-terminus HPY17_03760 PF07196 Flagellin hook IN motif HPY17_03760 PF07195 Flagellar hook-associated protein 2 C-terminus HPY17_03770 PF02561 Flagellar protein FliS HPY17_03775 PF00158 Sigma-54 interaction domain HPY17_03775 PF06490 Flagellar regulatory protein FleQ HPY17_03775 PF02954 Bacterial regulatory protein, Fis family HPY17_03780 PF08447 PAS fold HPY17_03780 PF00989 PAS fold HPY17_03780 PF13493 Domain of unknown function (DUF4118) HPY17_03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_03780 PF13426 PAS domain HPY17_03780 PF00512 His Kinase A (phospho-acceptor) domain HPY17_03785 PF02954 Bacterial regulatory protein, Fis family HPY17_03785 PF00158 Sigma-54 interaction domain HPY17_03785 PF00072 Response regulator receiver domain HPY17_03790 PF02049 Flagellar hook-basal body complex protein FliE HPY17_03795 PF01514 Secretory protein of YscJ/FliF family HPY17_03795 PF08345 Flagellar M-ring protein C-terminal HPY17_03800 PF14842 FliG N-terminal domain HPY17_03800 PF14841 FliG middle domain HPY17_03800 PF01706 FliG C-terminal domain HPY17_03810 PF18269 T3SS EscN ATPase C-terminal domain HPY17_03810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY17_03830 PF03748 Flagellar basal body-associated protein FliL HPY17_03835 PF02154 Flagellar motor switch protein FliM HPY17_03835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY17_03840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY17_03845 PF04347 Flagellar biosynthesis protein, FliO HPY17_03850 PF00813 FliP family HPY17_03855 PF01313 Bacterial export proteins, family 3 HPY17_03860 PF01311 Bacterial export proteins, family 1 HPY17_03865 PF01312 FlhB HrpN YscU SpaS Family HPY17_03870 PF01713 Smr domain HPY17_03875 PF05175 Methyltransferase small domain HPY17_03880 PF01264 Chorismate synthase HPY17_03885 PF03458 UPF0126 domain HPY17_03890 PF04315 Elongation factor P hydroxylase HPY17_03895 PF08891 YfcL protein HPY17_03900 PF03358 NADPH-dependent FMN reductase HPY17_03905 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HPY17_03905 PF01266 FAD dependent oxidoreductase HPY17_03910 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY17_03910 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY17_03915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY17_03915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY17_03915 PF11890 Domain of unknown function (DUF3410) HPY17_03920 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY17_03920 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY17_03925 PF01475 Ferric uptake regulator family HPY17_03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_03935 PF03466 LysR substrate binding domain HPY17_03940 PF03788 LrgA family HPY17_03945 PF04172 LrgB-like family HPY17_03950 PF00258 Flavodoxin HPY17_03960 PF12697 Alpha/beta hydrolase family HPY17_03965 PF17206 SeqA protein N-terminal domain HPY17_03965 PF03925 SeqA protein C-terminal domain HPY17_03970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY17_03970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY17_03970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY17_03970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY17_03980 PF01784 NIF3 (NGG1p interacting factor 3) HPY17_03985 PF00285 Citrate synthase, C-terminal domain HPY17_03990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY17_03995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY17_04000 PF02910 Fumarate reductase flavoprotein C-term HPY17_04000 PF00890 FAD binding domain HPY17_04005 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY17_04010 PF00676 Dehydrogenase E1 component HPY17_04010 PF16870 2-oxoglutarate dehydrogenase C-terminal HPY17_04010 PF02779 Transketolase, pyrimidine binding domain HPY17_04010 PF16078 2-oxoglutarate dehydrogenase N-terminus HPY17_04015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY17_04015 PF00364 Biotin-requiring enzyme HPY17_04015 PF02817 e3 binding domain HPY17_04020 PF00549 CoA-ligase HPY17_04020 PF08442 ATP-grasp domain HPY17_04025 PF02629 CoA binding domain HPY17_04025 PF00549 CoA-ligase HPY17_04030 PF00950 ABC 3 transport family HPY17_04035 PF00005 ABC transporter HPY17_04040 PF01297 Zinc-uptake complex component A periplasmic HPY17_04045 PF02311 AraC-like ligand binding domain HPY17_04045 PF12833 Helix-turn-helix domain HPY17_04050 PF04023 FeoA domain HPY17_04055 PF07664 Ferrous iron transport protein B C terminus HPY17_04055 PF02421 Ferrous iron transport protein B HPY17_04055 PF07670 Nucleoside recognition HPY17_04070 PF00750 tRNA synthetases class I (R) HPY17_04070 PF05746 DALR anticodon binding domain HPY17_04070 PF03485 Arginyl tRNA synthetase N terminal domain HPY17_04080 PF00675 Insulinase (Peptidase family M16) HPY17_04080 PF05193 Peptidase M16 inactive domain HPY17_04085 PF00300 Histidine phosphatase superfamily (branch 1) HPY17_04090 PF00771 FHIPEP family HPY17_04095 PF00448 SRP54-type protein, GTPase domain HPY17_04100 PF10609 NUBPL iron-transfer P-loop NTPase HPY17_04105 PF04545 Sigma-70, region 4 HPY17_04105 PF04542 Sigma-70 region 2 HPY17_04105 PF04539 Sigma-70 region 3 HPY17_04110 PF00072 Response regulator receiver domain HPY17_04115 PF04344 Chemotaxis phosphatase, CheZ HPY17_04120 PF00072 Response regulator receiver domain HPY17_04120 PF01627 Hpt domain HPY17_04120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_04120 PF02895 Signal transducing histidine kinase, homodimeric domain HPY17_04120 PF01584 CheW-like domain HPY17_04125 PF00072 Response regulator receiver domain HPY17_04125 PF01339 CheB methylesterase HPY17_04130 PF13614 AAA domain HPY17_04140 PF01584 CheW-like domain HPY17_04150 PF00005 ABC transporter HPY17_04155 PF03379 CcmB protein HPY17_04160 PF01578 Cytochrome C assembly protein HPY17_04165 PF04995 Heme exporter protein D (CcmD) HPY17_04170 PF03100 CcmE HPY17_04175 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HPY17_04175 PF01578 Cytochrome C assembly protein HPY17_04180 PF08534 Redoxin HPY17_04185 PF03918 Cytochrome C biogenesis protein HPY17_04195 PF04333 MlaA lipoprotein HPY17_04210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY17_04210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY17_04215 PF00462 Glutaredoxin HPY17_04220 PF01131 DNA topoisomerase HPY17_04220 PF01751 Toprim domain HPY17_04225 PF00850 Histone deacetylase domain HPY17_04240 PF00884 Sulfatase HPY17_04240 PF11893 Domain of unknown function (DUF3413) HPY17_04245 PF07208 Protein of unknown function (DUF1414) HPY17_04250 PF04245 37-kD nucleoid-associated bacterial protein HPY17_04260 PF03553 Na+/H+ antiporter family HPY17_04265 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY17_04265 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY17_04270 PF01914 MarC family integral membrane protein HPY17_04275 PF00465 Iron-containing alcohol dehydrogenase HPY17_04275 PF00171 Aldehyde dehydrogenase family HPY17_04285 PF01740 STAS domain HPY17_04285 PF00916 Sulfate permease family HPY17_04290 PF00575 S1 RNA binding domain HPY17_04290 PF12111 Polyribonucleotide phosphorylase C terminal HPY17_04290 PF10150 Ribonuclease E/G family HPY17_04295 PF00849 RNA pseudouridylate synthase HPY17_04295 PF01479 S4 domain HPY17_04300 PF02545 Maf-like protein HPY17_04305 PF02620 Large ribosomal RNA subunit accumulation protein YceD HPY17_04310 PF01783 Ribosomal L32p protein family HPY17_04315 PF02504 Fatty acid synthesis protein HPY17_04320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY17_04320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY17_04325 PF00698 Acyl transferase domain HPY17_04335 PF00550 Phosphopantetheine attachment site HPY17_04340 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY17_04340 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY17_04345 PF01063 Amino-transferase class IV HPY17_04350 PF02618 YceG-like family HPY17_04355 PF02223 Thymidylate kinase HPY17_04360 PF09115 DNA polymerase III, delta subunit, C terminal HPY17_04365 PF01026 TatD related DNase HPY17_04370 PF00367 phosphotransferase system, EIIB HPY17_04370 PF02378 Phosphotransferase system, EIIC HPY17_04380 PF00209 Sodium:neurotransmitter symporter family HPY17_04395 PF01734 Patatin-like phospholipase HPY17_04400 PF00224 Pyruvate kinase, barrel domain HPY17_04400 PF02887 Pyruvate kinase, alpha/beta domain HPY17_04405 PF00480 ROK family HPY17_04410 PF01584 CheW-like domain HPY17_04410 PF00072 Response regulator receiver domain HPY17_04425 PF13847 Methyltransferase domain HPY17_04435 PF01263 Aldose 1-epimerase HPY17_04440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY17_04440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY17_04445 PF01641 SelR domain HPY17_04455 PF07023 Protein of unknown function (DUF1315) HPY17_04460 PF00710 Asparaginase, N-terminal HPY17_04460 PF17763 Glutaminase/Asparaginase C-terminal domain HPY17_04465 PF01343 Peptidase family S49 HPY17_04470 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_04470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY17_04475 PF01842 ACT domain HPY17_04475 PF00551 Formyl transferase HPY17_04485 PF04851 Type III restriction enzyme, res subunit HPY17_04485 PF13307 Helicase C-terminal domain HPY17_04490 PF00814 Glycoprotease family HPY17_04505 PF00561 alpha/beta hydrolase fold HPY17_04510 PF13193 AMP-binding enzyme C-terminal domain HPY17_04510 PF00501 AMP-binding enzyme HPY17_04515 PF00570 HRDC domain HPY17_04515 PF01612 3'-5' exonuclease HPY17_04530 PF13286 Phosphohydrolase-associated domain HPY17_04530 PF01966 HD domain HPY17_04540 PF00155 Aminotransferase class I and II HPY17_04545 PF00425 chorismate binding enzyme HPY17_04550 PF16582 Middle domain of thiamine pyrophosphate HPY17_04550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY17_04550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY17_04555 PF12697 Alpha/beta hydrolase family HPY17_04560 PF00378 Enoyl-CoA hydratase/isomerase HPY17_04565 PF13378 Enolase C-terminal domain-like HPY17_04570 PF13193 AMP-binding enzyme C-terminal domain HPY17_04570 PF00501 AMP-binding enzyme HPY17_04575 PF03594 Benzoate membrane transport protein HPY17_04580 PF07690 Major Facilitator Superfamily HPY17_04600 PF04170 NlpE N-terminal domain HPY17_04605 PF03776 Septum formation topological specificity factor MinE HPY17_04610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY17_04615 PF05209 Septum formation inhibitor MinC, N-terminal domain HPY17_04615 PF03775 Septum formation inhibitor MinC, C-terminal domain HPY17_04620 PF05166 YcgL domain HPY17_04625 PF13406 Transglycosylase SLT domain HPY17_04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_04630 PF03466 LysR substrate binding domain HPY17_04635 PF07670 Nucleoside recognition HPY17_04635 PF07662 Na+ dependent nucleoside transporter C-terminus HPY17_04635 PF01773 Na+ dependent nucleoside transporter N-terminus HPY17_04640 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY17_04645 PF01568 Molydopterin dinucleotide binding domain HPY17_04645 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY17_04645 PF00384 Molybdopterin oxidoreductase HPY17_04655 PF03466 LysR substrate binding domain HPY17_04655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_04660 PF01494 FAD binding domain HPY17_04665 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HPY17_04675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPY17_04675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPY17_04710 PF02810 SEC-C motif HPY17_04710 PF07517 SecA DEAD-like domain HPY17_04710 PF01043 SecA preprotein cross-linking domain HPY17_04710 PF07516 SecA Wing and Scaffold domain HPY17_04830 PF03707 Bacterial signalling protein N terminal repeat HPY17_04830 PF13188 PAS domain HPY17_04830 PF00990 Diguanylate cyclase, GGDEF domain HPY17_04830 PF00563 EAL domain HPY17_04840 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HPY17_04845 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY17_04850 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY17_04855 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY17_04860 PF02954 Bacterial regulatory protein, Fis family HPY17_04860 PF00158 Sigma-54 interaction domain HPY17_04860 PF00072 Response regulator receiver domain HPY17_04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_04865 PF00512 His Kinase A (phospho-acceptor) domain HPY17_04875 PF05697 Bacterial trigger factor protein (TF) HPY17_04875 PF05698 Bacterial trigger factor protein (TF) C-terminus HPY17_04875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY17_04880 PF00574 Clp protease HPY17_04885 PF07724 AAA domain (Cdc48 subfamily) HPY17_04885 PF10431 C-terminal, D2-small domain, of ClpB protein HPY17_04885 PF06689 ClpX C4-type zinc finger HPY17_04890 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY17_04890 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPY17_04890 PF00004 ATPase family associated with various cellular activities (AAA) HPY17_04895 PF00216 Bacterial DNA-binding protein HPY17_04900 PF13145 PPIC-type PPIASE domain HPY17_04910 PF02224 Cytidylate kinase HPY17_04915 PF00575 S1 RNA binding domain HPY17_04920 PF00216 Bacterial DNA-binding protein HPY17_04925 PF06305 Lipopolysaccharide assembly protein A domain HPY17_04930 PF18073 Rubredoxin metal binding domain HPY17_04935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY17_04940 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HPY17_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_04950 PF03466 LysR substrate binding domain HPY17_04960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY17_04960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY17_04965 PF01037 Lrp/AsnC ligand binding domain HPY17_04970 PF17854 FtsK alpha domain HPY17_04970 PF09397 Ftsk gamma domain HPY17_04970 PF01580 FtsK/SpoIIIE family HPY17_04970 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HPY17_04975 PF02600 Disulfide bond formation protein DsbB HPY17_04980 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HPY17_04985 PF07840 FadR C-terminal domain HPY17_04985 PF00392 Bacterial regulatory proteins, gntR family HPY17_04995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_04995 PF00672 HAMP domain HPY17_05000 PF01230 HIT domain HPY17_05015 PF13036 Peptidoglycan-synthase activator LpoB HPY17_05015 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HPY17_05025 PF05728 Uncharacterised protein family (UPF0227) HPY17_05030 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_05045 PF07968 Leukocidin/Hemolysin toxin family HPY17_05045 PF12563 Hemolytic toxin N terminal HPY17_05045 PF16458 Beta-prism lectin HPY17_05055 PF03461 TRCF domain HPY17_05055 PF02559 CarD-like/TRCF domain HPY17_05055 PF00270 DEAD/DEAH box helicase HPY17_05055 PF00271 Helicase conserved C-terminal domain HPY17_05055 PF17757 UvrB interaction domain HPY17_05065 PF12704 MacB-like periplasmic core domain HPY17_05065 PF02687 FtsX-like permease family HPY17_05070 PF00005 ABC transporter HPY17_05075 PF12704 MacB-like periplasmic core domain HPY17_05075 PF02687 FtsX-like permease family HPY17_05085 PF13567 Domain of unknown function (DUF4131) HPY17_05085 PF00753 Metallo-beta-lactamase superfamily HPY17_05085 PF03772 Competence protein HPY17_05090 PF00005 ABC transporter HPY17_05090 PF00664 ABC transporter transmembrane region HPY17_05095 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HPY17_05100 PF03966 Trm112p-like protein HPY17_05105 PF02348 Cytidylyltransferase HPY17_05110 PF04293 SpoVR like protein HPY17_05115 PF04285 Protein of unknown function (DUF444) HPY17_05120 PF08298 PrkA AAA domain HPY17_05120 PF06798 PrkA serine protein kinase C-terminal domain HPY17_05125 PF03887 YfbU domain HPY17_05135 PF04055 Radical SAM superfamily HPY17_05140 PF02743 Cache domain HPY17_05140 PF00672 HAMP domain HPY17_05140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_05150 PF01228 Glycine radical HPY17_05150 PF02901 Pyruvate formate lyase-like HPY17_05160 PF00005 ABC transporter HPY17_05165 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_05170 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_05175 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_05180 PF03372 Endonuclease/Exonuclease/phosphatase family HPY17_05185 PF10689 Protein of unknown function (DUF2496) HPY17_05190 PF07445 Primosomal replication protein priC HPY17_05195 PF01925 Sulfite exporter TauE/SafE HPY17_05200 PF13307 Helicase C-terminal domain HPY17_05200 PF06733 DEAD_2 HPY17_05210 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY17_05215 PF02810 SEC-C motif HPY17_05220 PF08668 HDOD domain HPY17_05220 PF00563 EAL domain HPY17_05225 PF00149 Calcineurin-like phosphoesterase HPY17_05230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY17_05235 PF09190 DALR domain HPY17_05235 PF01406 tRNA synthetases class I (C) catalytic domain HPY17_05240 PF02075 Crossover junction endodeoxyribonuclease RuvC HPY17_05245 PF01330 RuvA N terminal domain HPY17_05245 PF07499 RuvA, C-terminal domain HPY17_05250 PF17864 RuvB AAA lid domain HPY17_05250 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPY17_05250 PF05491 RuvB C-terminal winged helix domain HPY17_05255 PF01654 Cytochrome bd terminal oxidase subunit I HPY17_05260 PF02322 Cytochrome bd terminal oxidase subunit II HPY17_05265 PF08173 Membrane bound YbgT-like protein HPY17_05270 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HPY17_05275 PF03061 Thioesterase superfamily HPY17_05280 PF01618 MotA/TolQ/ExbB proton channel family HPY17_05285 PF02472 Biopolymer transport protein ExbD/TolR HPY17_05295 PF04052 TolB amino-terminal domain HPY17_05295 PF07676 WD40-like Beta Propeller Repeat HPY17_05300 PF00691 OmpA family HPY17_05310 PF02445 Quinolinate synthetase A protein HPY17_05320 PF00072 Response regulator receiver domain HPY17_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_05320 PF00512 His Kinase A (phospho-acceptor) domain HPY17_05320 PF09308 LuxQ, periplasmic HPY17_05325 PF06610 L-alanine exporter HPY17_05330 PF01238 Phosphomannose isomerase type I HPY17_05335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY17_05335 PF02378 Phosphotransferase system, EIIC HPY17_05335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY17_05340 PF12833 Helix-turn-helix domain HPY17_05350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY17_05370 PF00171 Aldehyde dehydrogenase family HPY17_05375 PF01590 GAF domain HPY17_05375 PF00158 Sigma-54 interaction domain HPY17_05375 PF02954 Bacterial regulatory protein, Fis family HPY17_05380 PF09905 DNA-binding protein VF530 HPY17_05390 PF00875 DNA photolyase HPY17_05390 PF03441 FAD binding domain of DNA photolyase HPY17_05420 PF00873 AcrB/AcrD/AcrF family HPY17_05425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY17_05435 PF02470 MlaD protein HPY17_05440 PF04403 Paraquat-inducible protein A HPY17_05445 PF00924 Mechanosensitive ion channel HPY17_05445 PF05552 Conserved TM helix HPY17_05465 PF08362 YcdC-like protein, C-terminal region HPY17_05465 PF00440 Bacterial regulatory proteins, tetR family HPY17_05470 PF00171 Aldehyde dehydrogenase family HPY17_05475 PF07383 Protein of unknown function (DUF1496) HPY17_05485 PF00440 Bacterial regulatory proteins, tetR family HPY17_05485 PF16295 Tetracyclin repressor-like, C-terminal domain HPY17_05490 PF02770 Acyl-CoA dehydrogenase, middle domain HPY17_05490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY17_05490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY17_05490 PF09317 Domain of unknown function (DUF1974) HPY17_05495 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY17_05495 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY17_05495 PF07055 Enoyl reductase FAD binding domain HPY17_05500 PF01176 Translation initiation factor 1A / IF-1 HPY17_05505 PF04376 Arginine-tRNA-protein transferase, N terminus HPY17_05505 PF04377 Arginine-tRNA-protein transferase, C terminus HPY17_05510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HPY17_05515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY17_05520 PF10692 Protein of unknown function (DUF2498) HPY17_05525 PF01396 Topoisomerase DNA binding C4 zinc finger HPY17_05525 PF01751 Toprim domain HPY17_05525 PF01131 DNA topoisomerase HPY17_05525 PF08272 Topoisomerase I zinc-ribbon-like HPY17_05530 PF00483 Nucleotidyl transferase HPY17_05535 PF08323 Starch synthase catalytic domain HPY17_05535 PF00534 Glycosyl transferases group 1 HPY17_05555 PF04993 TfoX N-terminal domain HPY17_05555 PF04994 TfoX C-terminal domain HPY17_05560 PF00356 Bacterial regulatory proteins, lacI family HPY17_05565 PF02613 Nitrate reductase delta subunit HPY17_05570 PF00072 Response regulator receiver domain HPY17_05570 PF00486 Transcriptional regulatory protein, C terminal HPY17_05575 PF02698 DUF218 domain HPY17_05580 PF13847 Methyltransferase domain HPY17_05585 PF17193 MukF C-terminal domain HPY17_05585 PF17192 MukF middle domain HPY17_05585 PF03882 MukF winged-helix domain HPY17_05590 PF04288 MukE-like family HPY17_05595 PF04310 MukB N-terminal HPY17_05595 PF16330 MukB hinge domain HPY17_05600 PF01037 Lrp/AsnC ligand binding domain HPY17_05605 PF01810 LysE type translocator HPY17_05610 PF08497 Radical SAM N-terminal HPY17_05610 PF11842 Domain of unknown function (DUF3362) HPY17_05610 PF04055 Radical SAM superfamily HPY17_05615 PF00990 Diguanylate cyclase, GGDEF domain HPY17_05615 PF08447 PAS fold HPY17_05615 PF08448 PAS fold HPY17_05615 PF00563 EAL domain HPY17_05620 PF00675 Insulinase (Peptidase family M16) HPY17_05620 PF05193 Peptidase M16 inactive domain HPY17_05635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_05635 PF03466 LysR substrate binding domain HPY17_05640 PF01717 Cobalamin-independent synthase, Catalytic domain HPY17_05640 PF08267 Cobalamin-independent synthase, N-terminal domain HPY17_05650 PF03795 YCII-related domain HPY17_05655 PF03061 Thioesterase superfamily HPY17_05660 PF04279 Intracellular septation protein A HPY17_05670 PF02698 DUF218 domain HPY17_05675 PF01370 NAD dependent epimerase/dehydratase family HPY17_05685 PF01226 Formate/nitrite transporter HPY17_05690 PF06796 Periplasmic nitrate reductase protein NapE HPY17_05695 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY17_05700 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY17_05700 PF01568 Molydopterin dinucleotide binding domain HPY17_05700 PF00384 Molybdopterin oxidoreductase HPY17_05720 PF02833 DHHA2 domain HPY17_05720 PF01368 DHH family HPY17_05740 PF00005 ABC transporter HPY17_05745 PF00005 ABC transporter HPY17_05745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_05750 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY17_05750 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_05755 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_05760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY17_05765 PF02954 Bacterial regulatory protein, Fis family HPY17_05765 PF00158 Sigma-54 interaction domain HPY17_05770 PF04012 PspA/IM30 family HPY17_05785 PF00529 HlyD membrane-fusion protein of T1SS HPY17_05785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY17_05790 PF13533 Biotin-lipoyl like HPY17_05795 PF00873 AcrB/AcrD/AcrF family HPY17_05800 PF03352 Methyladenine glycosylase HPY17_05805 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY17_05810 PF13091 PLD-like domain HPY17_05810 PF13396 Phospholipase_D-nuclease N-terminal HPY17_05815 PF00209 Sodium:neurotransmitter symporter family HPY17_05820 PF00195 Chalcone and stilbene synthases, N-terminal domain HPY17_05820 PF02797 Chalcone and stilbene synthases, C-terminal domain HPY17_05825 PF11647 Membrane Localization Domain HPY17_05840 PF00849 RNA pseudouridylate synthase HPY17_05845 PF01066 CDP-alcohol phosphatidyltransferase HPY17_05850 PF00005 ABC transporter HPY17_05855 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_05860 PF13416 Bacterial extracellular solute-binding protein HPY17_05870 PF06945 Protein of unknown function (DUF1289) HPY17_05880 PF03222 Tryptophan/tyrosine permease family HPY17_05890 PF01769 Divalent cation transporter HPY17_05890 PF00571 CBS domain HPY17_05890 PF03448 MgtE intracellular N domain HPY17_05895 PF00512 His Kinase A (phospho-acceptor) domain HPY17_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_05895 PF00072 Response regulator receiver domain HPY17_05895 PF09308 LuxQ, periplasmic HPY17_05900 PF00563 EAL domain HPY17_05900 PF00990 Diguanylate cyclase, GGDEF domain HPY17_05900 PF03707 Bacterial signalling protein N terminal repeat HPY17_05910 PF04151 Bacterial pre-peptidase C-terminal domain HPY17_05910 PF01752 Collagenase HPY17_05910 PF08453 Peptidase family M9 N-terminal HPY17_05920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY17_05920 PF12793 Sugar transport-related sRNA regulator N-term HPY17_05935 PF09009 Exotoxin A catalytic HPY17_05935 PF09102 Exotoxin A, targeting HPY17_05935 PF09101 Exotoxin A binding HPY17_05945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_05945 PF00672 HAMP domain HPY17_05945 PF12729 Four helix bundle sensory module for signal transduction HPY17_05955 PF01590 GAF domain HPY17_05955 PF00990 Diguanylate cyclase, GGDEF domain HPY17_05955 PF00360 Phytochrome region HPY17_05955 PF00563 EAL domain HPY17_05960 PF01386 Ribosomal L25p family HPY17_05970 PF00486 Transcriptional regulatory protein, C terminal HPY17_05970 PF00072 Response regulator receiver domain HPY17_05980 PF00271 Helicase conserved C-terminal domain HPY17_05980 PF04851 Type III restriction enzyme, res subunit HPY17_05985 PF01479 S4 domain HPY17_05985 PF00849 RNA pseudouridylate synthase HPY17_05990 PF07690 Major Facilitator Superfamily HPY17_06000 PF13460 NAD(P)H-binding HPY17_06000 PF11066 Protein of unknown function (DUF2867) HPY17_06005 PF01554 MatE HPY17_06010 PF00005 ABC transporter HPY17_06025 PF06965 Na+/H+ antiporter 1 HPY17_06030 PF00202 Aminotransferase class-III HPY17_06035 PF16653 Saccharopine dehydrogenase C-terminal domain HPY17_06035 PF03435 Saccharopine dehydrogenase NADP binding domain HPY17_06045 PF05736 OprF membrane domain HPY17_06045 PF00691 OmpA family HPY17_06050 PF02321 Outer membrane efflux protein HPY17_06105 PF03466 LysR substrate binding domain HPY17_06105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_06115 PF01863 Protein of unknown function DUF45 HPY17_06120 PF05971 RNA methyltransferase HPY17_06135 PF04204 Homoserine O-succinyltransferase HPY17_06155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY17_06170 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HPY17_06170 PF17203 Single cache domain 3 HPY17_06170 PF00989 PAS fold HPY17_06170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_06175 PF00072 Response regulator receiver domain HPY17_06175 PF12431 Transcriptional regulator HPY17_06185 PF00072 Response regulator receiver domain HPY17_06185 PF01584 CheW-like domain HPY17_06205 PF00072 Response regulator receiver domain HPY17_06205 PF00990 Diguanylate cyclase, GGDEF domain HPY17_06230 PF07690 Major Facilitator Superfamily HPY17_06235 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HPY17_06235 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HPY17_06240 PF00288 GHMP kinases N terminal domain HPY17_06240 PF10509 Galactokinase galactose-binding signature HPY17_06240 PF08544 GHMP kinases C terminal HPY17_06245 PF01263 Aldose 1-epimerase HPY17_06255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY17_06255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY17_06255 PF00205 Thiamine pyrophosphate enzyme, central domain HPY17_06260 PF03306 Alpha-acetolactate decarboxylase HPY17_06265 PF03466 LysR substrate binding domain HPY17_06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_06270 PF13402 Peptidase M60, enhancin and enhancin-like HPY17_06270 PF17291 N-terminal domain of M60-like peptidases HPY17_06270 PF13322 Domain of unknown function (DUF4092) HPY17_06280 PF06628 Catalase-related immune-responsive HPY17_06280 PF00199 Catalase HPY17_06290 PF00080 Copper/zinc superoxide dismutase (SODC) HPY17_06295 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HPY17_06300 PF00361 Proton-conducting membrane transporter HPY17_06300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY17_06305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_06305 PF03466 LysR substrate binding domain HPY17_06310 PF00501 AMP-binding enzyme HPY17_06310 PF13193 AMP-binding enzyme C-terminal domain HPY17_06340 PF10415 Fumarase C C-terminus HPY17_06340 PF00206 Lyase HPY17_06350 PF01654 Cytochrome bd terminal oxidase subunit I HPY17_06355 PF02322 Cytochrome bd terminal oxidase subunit II HPY17_06360 PF12704 MacB-like periplasmic core domain HPY17_06360 PF00005 ABC transporter HPY17_06360 PF02687 FtsX-like permease family HPY17_06365 PF12704 MacB-like periplasmic core domain HPY17_06365 PF02687 FtsX-like permease family HPY17_06365 PF00005 ABC transporter HPY17_06370 PF12704 MacB-like periplasmic core domain HPY17_06370 PF02687 FtsX-like permease family HPY17_06370 PF00005 ABC transporter HPY17_06380 PF00529 HlyD membrane-fusion protein of T1SS HPY17_06390 PF03466 LysR substrate binding domain HPY17_06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_06400 PF01593 Flavin containing amine oxidoreductase HPY17_06410 PF00175 Oxidoreductase NAD-binding domain HPY17_06415 PF04443 Acyl-protein synthetase, LuxE HPY17_06420 PF00296 Luciferase-like monooxygenase HPY17_06425 PF00296 Luciferase-like monooxygenase HPY17_06430 PF02273 Acyl transferase HPY17_06435 PF05893 Acyl-CoA reductase (LuxC) HPY17_06445 PF00709 Adenylosuccinate synthetase HPY17_06460 PF00977 Histidine biosynthesis protein HPY17_06465 PF00141 Peroxidase HPY17_06470 PF00232 Glycosyl hydrolase family 1 HPY17_06475 PF00356 Bacterial regulatory proteins, lacI family HPY17_06480 PF01042 Endoribonuclease L-PSP HPY17_06485 PF04074 YhcH/YjgK/YiaL HPY17_06490 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY17_06495 PF00455 DeoR C terminal sensor domain HPY17_06495 PF08220 DeoR-like helix-turn-helix domain HPY17_06500 PF17912 MalK OB fold domain HPY17_06500 PF00005 ABC transporter HPY17_06505 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_06510 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_06515 PF13416 Bacterial extracellular solute-binding protein HPY17_06525 PF01618 MotA/TolQ/ExbB proton channel family HPY17_06530 PF01618 MotA/TolQ/ExbB proton channel family HPY17_06535 PF02472 Biopolymer transport protein ExbD/TolR HPY17_06540 PF03544 Gram-negative bacterial TonB protein C-terminal HPY17_06550 PF14743 DNA ligase OB-like domain HPY17_06550 PF01068 ATP dependent DNA ligase domain HPY17_06560 PF01554 MatE HPY17_06570 PF03881 Fructosamine kinase HPY17_06580 PF00877 NlpC/P60 family HPY17_06585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_06585 PF12729 Four helix bundle sensory module for signal transduction HPY17_06585 PF00672 HAMP domain HPY17_06600 PF00480 ROK family HPY17_06610 PF03453 MoeA N-terminal region (domain I and II) HPY17_06610 PF03454 MoeA C-terminal region (domain IV) HPY17_06610 PF00994 Probable molybdopterin binding domain HPY17_06615 PF12804 MobA-like NTP transferase domain HPY17_06620 PF08402 TOBE domain HPY17_06620 PF00005 ABC transporter HPY17_06625 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_06630 PF12849 PBP superfamily domain HPY17_06635 PF00158 Sigma-54 interaction domain HPY17_06635 PF00072 Response regulator receiver domain HPY17_06635 PF02954 Bacterial regulatory protein, Fis family HPY17_06640 PF00989 PAS fold HPY17_06640 PF00512 His Kinase A (phospho-acceptor) domain HPY17_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_06645 PF12848 ABC transporter HPY17_06645 PF00005 ABC transporter HPY17_06650 PF02634 FdhD/NarQ family HPY17_06680 PF00384 Molybdopterin oxidoreductase HPY17_06680 PF01568 Molydopterin dinucleotide binding domain HPY17_06680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY17_06685 PF13247 4Fe-4S dicluster domain HPY17_06700 PF02146 Sir2 family HPY17_06705 PF04461 Protein of unknown function (DUF520) HPY17_06710 PF00793 DAHP synthetase I family HPY17_06725 PF13509 S1 domain HPY17_06725 PF17783 CvfB-like winged helix domain HPY17_06730 PF01189 16S rRNA methyltransferase RsmB/F HPY17_06730 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HPY17_06730 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HPY17_06735 PF02470 MlaD protein HPY17_06740 PF04403 Paraquat-inducible protein A HPY17_06745 PF00664 ABC transporter transmembrane region HPY17_06745 PF00005 ABC transporter HPY17_06750 PF13185 GAF domain HPY17_06755 PF04352 ProQ/FINO family HPY17_06755 PF17516 ProQ C-terminal domain HPY17_06760 PF03572 Peptidase family S41 HPY17_06760 PF11818 C-terminal domain of tail specific protease (DUF3340) HPY17_06760 PF17804 Tail specific protease N-terminal domain HPY17_06760 PF00595 PDZ domain HPY17_06770 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HPY17_06770 PF01433 Peptidase family M1 domain HPY17_06770 PF11940 Domain of unknown function (DUF3458) Ig-like fold HPY17_06780 PF05088 Bacterial NAD-glutamate dehydrogenase HPY17_06785 PF01180 Dihydroorotate dehydrogenase HPY17_06790 PF07126 Cell-division protein ZapC HPY17_06795 PF01170 Putative RNA methylase family UPF0020 HPY17_06795 PF10672 S-adenosylmethionine-dependent methyltransferase HPY17_06795 PF02926 THUMP domain HPY17_06815 PF04957 Ribosome modulation factor HPY17_06820 PF07977 FabA-like domain HPY17_06825 PF13654 AAA domain HPY17_06825 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY17_06830 PF06303 MatP N-terminal domain HPY17_06830 PF17414 MatP C-terminal ribbon-helix-helix domain HPY17_06970 PF11713 Peptidase C80 family HPY17_06970 PF07634 RtxA repeat HPY17_06970 PF11647 Membrane Localization Domain HPY17_06970 PF16671 Actin cross-linking domain HPY17_06970 PF12146 Serine aminopeptidase, S33 HPY17_06975 PF02794 RTX toxin acyltransferase family HPY17_06985 PF00664 ABC transporter transmembrane region HPY17_06985 PF03412 Peptidase C39 family HPY17_06985 PF00005 ABC transporter HPY17_06995 PF03412 Peptidase C39 family HPY17_06995 PF00664 ABC transporter transmembrane region HPY17_06995 PF00005 ABC transporter HPY17_07000 PF09308 LuxQ, periplasmic HPY17_07000 PF00512 His Kinase A (phospho-acceptor) domain HPY17_07000 PF00072 Response regulator receiver domain HPY17_07000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_07015 PF00115 Cytochrome C and Quinol oxidase polypeptide I HPY17_07030 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HPY17_07030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY17_07040 PF00403 Heavy-metal-associated domain HPY17_07055 PF13545 Crp-like helix-turn-helix domain HPY17_07055 PF00027 Cyclic nucleotide-binding domain HPY17_07060 PF00582 Universal stress protein family HPY17_07065 PF01171 PP-loop family HPY17_07085 PF00005 ABC transporter HPY17_07085 PF08402 TOBE domain HPY17_07090 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_07095 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_07100 PF13416 Bacterial extracellular solute-binding protein HPY17_07105 PF13416 Bacterial extracellular solute-binding protein HPY17_07120 PF01235 Sodium:alanine symporter family HPY17_07125 PF01810 LysE type translocator HPY17_07155 PF16671 Actin cross-linking domain HPY17_07155 PF04717 Type VI secretion system, phage-baseplate injector HPY17_07160 PF05638 Type VI secretion system effector, Hcp HPY17_07165 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HPY17_07170 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HPY17_07180 PF00171 Aldehyde dehydrogenase family HPY17_07185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HPY17_07200 PF00171 Aldehyde dehydrogenase family HPY17_07205 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY17_07210 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY17_07215 PF03328 HpcH/HpaI aldolase/citrate lyase family HPY17_07220 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY17_07235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY17_07240 PF01047 MarR family HPY17_07245 PF01613 Flavin reductase like domain HPY17_07255 PF00171 Aldehyde dehydrogenase family HPY17_07270 PF03401 Tripartite tricarboxylate transporter family receptor HPY17_07275 PF00582 Universal stress protein family HPY17_07280 PF01266 FAD dependent oxidoreductase HPY17_07290 PF02423 Ornithine cyclodeaminase/mu-crystallin family HPY17_07300 PF00271 Helicase conserved C-terminal domain HPY17_07300 PF00270 DEAD/DEAH box helicase HPY17_07305 PF00893 Small Multidrug Resistance protein HPY17_07310 PF07690 Major Facilitator Superfamily HPY17_07315 PF03466 LysR substrate binding domain HPY17_07315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_07325 PF01979 Amidohydrolase family HPY17_07330 PF10437 Bacterial lipoate protein ligase C-terminus HPY17_07330 PF03099 Biotin/lipoate A/B protein ligase family HPY17_07335 PF00012 Hsp70 protein HPY17_07345 PF00270 DEAD/DEAH box helicase HPY17_07345 PF00271 Helicase conserved C-terminal domain HPY17_07345 PF04408 Helicase associated domain (HA2) HPY17_07345 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HPY17_07345 PF11898 Domain of unknown function (DUF3418) HPY17_07365 PF00563 EAL domain HPY17_07365 PF00990 Diguanylate cyclase, GGDEF domain HPY17_07365 PF03707 Bacterial signalling protein N terminal repeat HPY17_07375 PF00012 Hsp70 protein HPY17_07380 PF00012 Hsp70 protein HPY17_07385 PF17158 Membrane-associated sensor, integral membrane domain HPY17_07385 PF00990 Diguanylate cyclase, GGDEF domain HPY17_07395 PF03707 Bacterial signalling protein N terminal repeat HPY17_07395 PF00990 Diguanylate cyclase, GGDEF domain HPY17_07395 PF00563 EAL domain HPY17_07415 PF06508 Queuosine biosynthesis protein QueC HPY17_07420 PF04055 Radical SAM superfamily HPY17_07430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY17_07430 PF14824 Sirohaem biosynthesis protein central HPY17_07430 PF10414 Sirohaem synthase dimerisation region HPY17_07435 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_07440 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_07445 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_07450 PF00005 ABC transporter HPY17_07455 PF01027 Inhibitor of apoptosis-promoting Bax1 HPY17_07460 PF04358 DsrC like protein HPY17_07465 PF00708 Acylphosphatase HPY17_07475 PF00990 Diguanylate cyclase, GGDEF domain HPY17_07480 PF00462 Glutaredoxin HPY17_07480 PF08534 Redoxin HPY17_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_07485 PF00512 His Kinase A (phospho-acceptor) domain HPY17_07485 PF01627 Hpt domain HPY17_07485 PF00072 Response regulator receiver domain HPY17_07485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY17_07485 PF00672 HAMP domain HPY17_07490 PF00072 Response regulator receiver domain HPY17_07495 PF02798 Glutathione S-transferase, N-terminal domain HPY17_07495 PF14497 Glutathione S-transferase, C-terminal domain HPY17_07505 PF04209 homogentisate 1,2-dioxygenase HPY17_07510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY17_07515 PF07687 Peptidase dimerisation domain HPY17_07515 PF01546 Peptidase family M20/M25/M40 HPY17_07530 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY17_07530 PF13193 AMP-binding enzyme C-terminal domain HPY17_07530 PF00501 AMP-binding enzyme HPY17_07535 PF04303 PrpF protein HPY17_07540 PF00330 Aconitase family (aconitate hydratase) HPY17_07540 PF00694 Aconitase C-terminal domain HPY17_07545 PF00285 Citrate synthase, C-terminal domain HPY17_07555 PF07729 FCD domain HPY17_07555 PF00392 Bacterial regulatory proteins, gntR family HPY17_07570 PF01970 Tripartite tricarboxylate transporter TctA family HPY17_07575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_07575 PF03466 LysR substrate binding domain HPY17_07580 PF07715 TonB-dependent Receptor Plug Domain HPY17_07580 PF00593 TonB dependent receptor HPY17_07605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY17_07605 PF00529 HlyD membrane-fusion protein of T1SS HPY17_07620 PF02653 Branched-chain amino acid transport system / permease component HPY17_07625 PF00005 ABC transporter HPY17_07630 PF13407 Periplasmic binding protein domain HPY17_07650 PF00486 Transcriptional regulatory protein, C terminal HPY17_07650 PF00072 Response regulator receiver domain HPY17_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_07655 PF00672 HAMP domain HPY17_07655 PF00512 His Kinase A (phospho-acceptor) domain HPY17_07660 PF06629 MltA-interacting protein MipA HPY17_07665 PF04393 Protein of unknown function (DUF535) HPY17_07670 PF02954 Bacterial regulatory protein, Fis family HPY17_07670 PF00158 Sigma-54 interaction domain HPY17_07670 PF00072 Response regulator receiver domain HPY17_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_07675 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_07675 PF00512 His Kinase A (phospho-acceptor) domain HPY17_07680 PF00939 Sodium:sulfate symporter transmembrane region HPY17_07685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_07685 PF00672 HAMP domain HPY17_07690 PF00842 Alanine racemase, C-terminal domain HPY17_07690 PF01168 Alanine racemase, N-terminal domain HPY17_07695 PF00892 EamA-like transporter family HPY17_07705 PF13302 Acetyltransferase (GNAT) domain HPY17_07710 PF18024 Helix-turn-helix domain HPY17_07710 PF00158 Sigma-54 interaction domain HPY17_07715 PF05128 Domain of unknown function (DUF697) HPY17_07720 PF04317 YcjX-like family, DUF463 HPY17_07735 PF00425 chorismate binding enzyme HPY17_07735 PF04715 Anthranilate synthase component I, N terminal region HPY17_07740 PF00293 NUDIX domain HPY17_07745 PF03222 Tryptophan/tyrosine permease family HPY17_07750 PF03315 Serine dehydratase beta chain HPY17_07750 PF03313 Serine dehydratase alpha chain HPY17_07755 PF01242 6-pyruvoyl tetrahydropterin synthase HPY17_07760 PF12729 Four helix bundle sensory module for signal transduction HPY17_07760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_07760 PF00672 HAMP domain HPY17_07765 PF01336 OB-fold nucleic acid binding domain HPY17_07765 PF00152 tRNA synthetases class II (D, K and N) HPY17_07770 PF08543 Phosphomethylpyrimidine kinase HPY17_07775 PF01966 HD domain HPY17_07775 PF00672 HAMP domain HPY17_07780 PF00155 Aminotransferase class I and II HPY17_07795 PF17200 Single Cache domain 2 HPY17_07795 PF00672 HAMP domain HPY17_07795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_07800 PF04349 Periplasmic glucan biosynthesis protein, MdoG HPY17_07805 PF13506 Glycosyl transferase family 21 HPY17_07810 PF02028 BCCT, betaine/carnitine/choline family transporter HPY17_07815 PF01047 MarR family HPY17_07820 PF00196 Bacterial regulatory proteins, luxR family HPY17_07820 PF00072 Response regulator receiver domain HPY17_07825 PF17200 Single Cache domain 2 HPY17_07825 PF07730 Histidine kinase HPY17_07830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY17_07840 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY17_07855 PF00753 Metallo-beta-lactamase superfamily HPY17_07860 PF05951 Bacterial protein of unknown function (DUF882) HPY17_07890 PF00925 GTP cyclohydrolase II HPY17_07900 PF07690 Major Facilitator Superfamily HPY17_07915 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY17_07915 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY17_07925 PF02867 Ribonucleotide reductase, barrel domain HPY17_07925 PF00317 Ribonucleotide reductase, all-alpha domain HPY17_07925 PF03477 ATP cone domain HPY17_07930 PF00268 Ribonucleotide reductase, small chain HPY17_07935 PF00175 Oxidoreductase NAD-binding domain HPY17_07935 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY17_07935 PF00970 Oxidoreductase FAD-binding domain HPY17_07945 PF00994 Probable molybdopterin binding domain HPY17_07960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_07960 PF17200 Single Cache domain 2 HPY17_07960 PF00672 HAMP domain HPY17_07975 PF00005 ABC transporter HPY17_07980 PF01032 FecCD transport family HPY17_07985 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HPY17_07995 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HPY17_08000 PF02654 Cobalamin-5-phosphate synthase HPY17_08005 PF02277 Phosphoribosyltransferase HPY17_08010 PF01641 SelR domain HPY17_08020 PF00929 Exonuclease HPY17_08020 PF08411 Exonuclease C-terminal HPY17_08025 PF03788 LrgA family HPY17_08030 PF04172 LrgB-like family HPY17_08035 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HPY17_08035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY17_08045 PF02222 ATP-grasp domain HPY17_08050 PF05724 Thiopurine S-methyltransferase (TPMT) HPY17_08060 PF00216 Bacterial DNA-binding protein HPY17_08065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPY17_08065 PF03147 Ferredoxin-fold anticodon binding domain HPY17_08065 PF03484 tRNA synthetase B5 domain HPY17_08065 PF03483 B3/4 domain HPY17_08065 PF01588 Putative tRNA binding domain HPY17_08070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HPY17_08070 PF01409 tRNA synthetases class II core domain (F) HPY17_08080 PF00990 Diguanylate cyclase, GGDEF domain HPY17_08080 PF00072 Response regulator receiver domain HPY17_08105 PF01066 CDP-alcohol phosphatidyltransferase HPY17_08110 PF01541 GIY-YIG catalytic domain HPY17_08110 PF08459 UvrC Helix-hairpin-helix N-terminal HPY17_08110 PF02151 UvrB/uvrC motif HPY17_08115 PF00196 Bacterial regulatory proteins, luxR family HPY17_08115 PF00072 Response regulator receiver domain HPY17_08120 PF03104 DNA polymerase family B, exonuclease domain HPY17_08120 PF00136 DNA polymerase family B HPY17_08125 PF00990 Diguanylate cyclase, GGDEF domain HPY17_08125 PF00563 EAL domain HPY17_08125 PF13426 PAS domain HPY17_08135 PF01132 Elongation factor P (EF-P) OB domain HPY17_08135 PF08207 Elongation factor P (EF-P) KOW-like domain HPY17_08135 PF09285 Elongation factor P, C-terminal HPY17_08140 PF04269 Protein of unknown function, DUF440 HPY17_08150 PF00392 Bacterial regulatory proteins, gntR family HPY17_08150 PF07702 UTRA domain HPY17_08155 PF01979 Amidohydrolase family HPY17_08160 PF00491 Arginase family HPY17_08165 PF17391 Urocanase N-terminal domain HPY17_08165 PF17392 Urocanase C-terminal domain HPY17_08165 PF01175 Urocanase Rossmann-like domain HPY17_08170 PF00221 Aromatic amino acid lyase HPY17_08180 PF00089 Trypsin HPY17_08185 PF04191 Phospholipid methyltransferase HPY17_08190 PF01565 FAD binding domain HPY17_08190 PF13183 4Fe-4S dicluster domain HPY17_08190 PF02913 FAD linked oxidases, C-terminal domain HPY17_08205 PF13488 Glycine zipper HPY17_08205 PF00691 OmpA family HPY17_08225 PF01259 SAICAR synthetase HPY17_08235 PF03949 Malic enzyme, NAD binding domain HPY17_08235 PF00390 Malic enzyme, N-terminal domain HPY17_08245 PF02698 DUF218 domain HPY17_08250 PF00990 Diguanylate cyclase, GGDEF domain HPY17_08250 PF08448 PAS fold HPY17_08255 PF00266 Aminotransferase class-V HPY17_08265 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_08270 PF00664 ABC transporter transmembrane region HPY17_08270 PF00005 ABC transporter HPY17_08275 PF00005 ABC transporter HPY17_08275 PF00664 ABC transporter transmembrane region HPY17_08280 PF01479 S4 domain HPY17_08280 PF00849 RNA pseudouridylate synthase HPY17_08285 PF01300 Telomere recombination HPY17_08290 PF02811 PHP domain HPY17_08295 PF08056 Tryptophan operon leader peptide HPY17_08300 PF04715 Anthranilate synthase component I, N terminal region HPY17_08300 PF00425 chorismate binding enzyme HPY17_08305 PF00117 Glutamine amidotransferase class-I HPY17_08310 PF02885 Glycosyl transferase family, helical bundle domain HPY17_08310 PF00591 Glycosyl transferase family, a/b domain HPY17_08315 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HPY17_08315 PF00218 Indole-3-glycerol phosphate synthase HPY17_08320 PF00291 Pyridoxal-phosphate dependent enzyme HPY17_08325 PF00290 Tryptophan synthase alpha chain HPY17_08330 PF00375 Sodium:dicarboxylate symporter family HPY17_08335 PF00265 Thymidine kinase HPY17_08340 PF02938 GAD domain HPY17_08340 PF00152 tRNA synthetases class II (D, K and N) HPY17_08340 PF01336 OB-fold nucleic acid binding domain HPY17_08350 PF13649 Methyltransferase domain HPY17_08355 PF08003 Protein of unknown function (DUF1698) HPY17_08360 PF18030 RimK PreATP-grasp domain HPY17_08360 PF08443 RimK-like ATP-grasp domain HPY17_08375 PF00266 Aminotransferase class-V HPY17_08385 PF00512 His Kinase A (phospho-acceptor) domain HPY17_08385 PF00989 PAS fold HPY17_08385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_08400 PF04994 TfoX C-terminal domain HPY17_08400 PF04993 TfoX N-terminal domain HPY17_08410 PF03956 Lysine exporter LysO HPY17_08420 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY17_08425 PF01418 Helix-turn-helix domain, rpiR family HPY17_08425 PF01380 SIS domain HPY17_08430 PF00465 Iron-containing alcohol dehydrogenase HPY17_08430 PF00171 Aldehyde dehydrogenase family HPY17_08435 PF00462 Glutaredoxin HPY17_08440 PF06826 Predicted Permease Membrane Region HPY17_08440 PF02080 TrkA-C domain HPY17_08445 PF07724 AAA domain (Cdc48 subfamily) HPY17_08445 PF02861 Clp amino terminal domain, pathogenicity island component HPY17_08445 PF10431 C-terminal, D2-small domain, of ClpB protein HPY17_08445 PF00004 ATPase family associated with various cellular activities (AAA) HPY17_08445 PF17871 AAA lid domain HPY17_08450 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPY17_08455 PF00313 'Cold-shock' DNA-binding domain HPY17_08460 PF03971 Monomeric isocitrate dehydrogenase HPY17_08465 PF00849 RNA pseudouridylate synthase HPY17_08470 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HPY17_08470 PF01502 Phosphoribosyl-AMP cyclohydrolase HPY17_08475 PF00977 Histidine biosynthesis protein HPY17_08480 PF00977 Histidine biosynthesis protein HPY17_08485 PF00117 Glutamine amidotransferase class-I HPY17_08490 PF08645 Polynucleotide kinase 3 phosphatase HPY17_08490 PF00475 Imidazoleglycerol-phosphate dehydratase HPY17_08495 PF00155 Aminotransferase class I and II HPY17_08500 PF00815 Histidinol dehydrogenase HPY17_08505 PF01634 ATP phosphoribosyltransferase HPY17_08505 PF08029 HisG, C-terminal domain HPY17_08510 PF03553 Na+/H+ antiporter family HPY17_08515 PF00816 H-NS histone family HPY17_08520 PF00294 pfkB family carbohydrate kinase HPY17_08530 PF04356 Protein of unknown function (DUF489) HPY17_08535 PF00206 Lyase HPY17_08535 PF08328 Adenylosuccinate lyase C-terminal HPY17_08545 PF16036 Chalcone isomerase-like HPY17_08570 PF00106 short chain dehydrogenase HPY17_08580 PF01435 Peptidase family M48 HPY17_08595 PF08241 Methyltransferase domain HPY17_08600 PF00155 Aminotransferase class I and II HPY17_08605 PF06968 Biotin and Thiamin Synthesis associated domain HPY17_08605 PF04055 Radical SAM superfamily HPY17_08610 PF00202 Aminotransferase class-III HPY17_08615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY17_08615 PF02403 Seryl-tRNA synthetase N-terminal domain HPY17_08620 PF12002 MgsA AAA+ ATPase C terminal HPY17_08620 PF00004 ATPase family associated with various cellular activities (AAA) HPY17_08620 PF16193 AAA C-terminal domain HPY17_08625 PF03548 Outer membrane lipoprotein carrier protein LolA HPY17_08630 PF01043 SecA preprotein cross-linking domain HPY17_08630 PF07517 SecA DEAD-like domain HPY17_08630 PF02810 SEC-C motif HPY17_08630 PF07516 SecA Wing and Scaffold domain HPY17_08635 PF01207 Dihydrouridine synthase (Dus) HPY17_08640 PF00990 Diguanylate cyclase, GGDEF domain HPY17_08640 PF05230 MASE2 domain HPY17_08645 PF00005 ABC transporter HPY17_08650 PF02653 Branched-chain amino acid transport system / permease component HPY17_08660 PF09905 DNA-binding protein VF530 HPY17_08665 PF04217 Protein of unknown function, DUF412 HPY17_08670 PF00871 Acetokinase family HPY17_08675 PF07085 DRTGG domain HPY17_08675 PF01515 Phosphate acetyl/butaryl transferase HPY17_08680 PF13409 Glutathione S-transferase, N-terminal domain HPY17_08685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_08685 PF00005 ABC transporter HPY17_08690 PF00005 ABC transporter HPY17_08690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_08695 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY17_08695 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_08700 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_08705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY17_08715 PF08448 PAS fold HPY17_08715 PF00072 Response regulator receiver domain HPY17_08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_08715 PF00512 His Kinase A (phospho-acceptor) domain HPY17_08715 PF13188 PAS domain HPY17_08720 PF00158 Sigma-54 interaction domain HPY17_08720 PF00072 Response regulator receiver domain HPY17_08720 PF02954 Bacterial regulatory protein, Fis family HPY17_08725 PF13188 PAS domain HPY17_08725 PF00563 EAL domain HPY17_08725 PF00990 Diguanylate cyclase, GGDEF domain HPY17_08725 PF03707 Bacterial signalling protein N terminal repeat HPY17_08730 PF00512 His Kinase A (phospho-acceptor) domain HPY17_08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_08735 PF13426 PAS domain HPY17_08735 PF13188 PAS domain HPY17_08735 PF00989 PAS fold HPY17_08735 PF00512 His Kinase A (phospho-acceptor) domain HPY17_08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_08745 PF00072 Response regulator receiver domain HPY17_08760 PF01300 Telomere recombination HPY17_08760 PF03481 Putative GTP-binding controlling metal-binding HPY17_08775 PF01161 Phosphatidylethanolamine-binding protein HPY17_08785 PF00704 Glycosyl hydrolases family 18 HPY17_08785 PF06483 Chitinase C HPY17_08800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY17_08800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY17_08805 PF01022 Bacterial regulatory protein, arsR family HPY17_08830 PF01420 Type I restriction modification DNA specificity domain HPY17_08835 PF12161 HsdM N-terminal domain HPY17_08835 PF02384 N-6 DNA Methylase HPY17_08845 PF08463 EcoEI R protein C-terminal HPY17_08845 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HPY17_08845 PF04851 Type III restriction enzyme, res subunit HPY17_08845 PF00271 Helicase conserved C-terminal domain HPY17_08855 PF01381 Helix-turn-helix HPY17_08880 PF08448 PAS fold HPY17_08880 PF00990 Diguanylate cyclase, GGDEF domain HPY17_08890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY17_08905 PF13404 AsnC-type helix-turn-helix domain HPY17_08905 PF01037 Lrp/AsnC ligand binding domain HPY17_08910 PF00291 Pyridoxal-phosphate dependent enzyme HPY17_08915 PF08496 Peptidase family S49 N-terminal HPY17_08915 PF01343 Peptidase family S49 HPY17_08920 PF00106 short chain dehydrogenase HPY17_08925 PF03692 Putative zinc- or iron-chelating domain HPY17_08930 PF03692 Putative zinc- or iron-chelating domain HPY17_08935 PF02132 RecR protein HPY17_08935 PF13662 Toprim domain HPY17_08940 PF02575 YbaB/EbfC DNA-binding family HPY17_08945 PF12169 DNA polymerase III subunits gamma and tau domain III HPY17_08945 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HPY17_08945 PF12170 DNA polymerase III tau subunit V interacting with alpha HPY17_08950 PF00156 Phosphoribosyl transferase domain HPY17_08955 PF04304 Protein of unknown function (DUF454) HPY17_08960 PF00072 Response regulator receiver domain HPY17_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_08965 PF03466 LysR substrate binding domain HPY17_08970 PF00881 Nitroreductase family HPY17_08975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY17_08975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY17_08975 PF00378 Enoyl-CoA hydratase/isomerase HPY17_08980 PF02803 Thiolase, C-terminal domain HPY17_08980 PF00108 Thiolase, N-terminal domain HPY17_08985 PF08281 Sigma-70, region 4 HPY17_08985 PF04542 Sigma-70 region 2 HPY17_08995 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY17_09000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY17_09005 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY17_09010 PF12557 Cob(I)alamin adenosyltransferase N terminal HPY17_09010 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HPY17_09015 PF05170 AsmA family HPY17_09020 PF00485 Phosphoribulokinase / Uridine kinase family HPY17_09025 PF10609 NUBPL iron-transfer P-loop NTPase HPY17_09030 PF09334 tRNA synthetases class I (M) HPY17_09030 PF01588 Putative tRNA binding domain HPY17_09040 PF01048 Phosphorylase superfamily HPY17_09045 PF00403 Heavy-metal-associated domain HPY17_09050 PF01743 Poly A polymerase head domain HPY17_09050 PF00571 CBS domain HPY17_09055 PF00990 Diguanylate cyclase, GGDEF domain HPY17_09055 PF07694 5TMR of 5TMR-LYT HPY17_09060 PF02391 MoaE protein HPY17_09065 PF02597 ThiS family HPY17_09070 PF01967 MoaC family HPY17_09075 PF00994 Probable molybdopterin binding domain HPY17_09080 PF06463 Molybdenum Cofactor Synthesis C HPY17_09080 PF04055 Radical SAM superfamily HPY17_09085 PF01933 Uncharacterised protein family UPF0052 HPY17_09090 PF01627 Hpt domain HPY17_09095 PF00158 Sigma-54 interaction domain HPY17_09095 PF00072 Response regulator receiver domain HPY17_09095 PF02954 Bacterial regulatory protein, Fis family HPY17_09100 PF00271 Helicase conserved C-terminal domain HPY17_09100 PF04851 Type III restriction enzyme, res subunit HPY17_09100 PF02151 UvrB/uvrC motif HPY17_09100 PF12344 Ultra-violet resistance protein B HPY17_09100 PF17757 UvrB interaction domain HPY17_09110 PF02508 Rnf-Nqr subunit, membrane protein HPY17_09115 PF04060 Putative Fe-S cluster HPY17_09120 PF10531 SLBB domain HPY17_09120 PF12838 4Fe-4S dicluster domain HPY17_09120 PF13375 RnfC Barrel sandwich hybrid domain HPY17_09120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HPY17_09125 PF03116 NQR2, RnfD, RnfE family HPY17_09130 PF04205 FMN-binding domain HPY17_09135 PF02508 Rnf-Nqr subunit, membrane protein HPY17_09140 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY17_09140 PF10576 Iron-sulfur binding domain of endonuclease III HPY17_09140 PF00633 Helix-hairpin-helix motif HPY17_09145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY17_09150 PF10952 Protein of unknown function (DUF2753) HPY17_09155 PF18393 MotY N-terminal domain HPY17_09155 PF00691 OmpA family HPY17_09160 PF00929 Exonuclease HPY17_09165 PF13726 Na+-H+ antiporter family HPY17_09165 PF03553 Na+/H+ antiporter family HPY17_09170 PF00156 Phosphoribosyl transferase domain HPY17_09175 PF02674 Colicin V production protein HPY17_09180 PF05036 Sporulation related domain HPY17_09185 PF08245 Mur ligase middle domain HPY17_09185 PF02875 Mur ligase family, glutamate ligase domain HPY17_09190 PF01039 Carboxyl transferase domain HPY17_09190 PF17848 Acetyl-coA carboxylase zinc finger domain HPY17_09195 PF01416 tRNA pseudouridine synthase HPY17_09205 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HPY17_09205 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY17_09210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY17_09210 PF02378 Phosphotransferase system, EIIC HPY17_09210 PF00367 phosphotransferase system, EIIB HPY17_09215 PF01979 Amidohydrolase family HPY17_09220 PF01047 MarR family HPY17_09220 PF00480 ROK family HPY17_09225 PF00999 Sodium/hydrogen exchanger family HPY17_09225 PF02254 TrkA-N domain HPY17_09230 PF00733 Asparagine synthase HPY17_09230 PF13537 Glutamine amidotransferase domain HPY17_09235 PF02357 Transcription termination factor nusG HPY17_09240 PF00854 POT family HPY17_09245 PF00762 Ferrochelatase HPY17_09250 PF05191 Adenylate kinase, active site lid HPY17_09255 PF00183 Hsp90 protein HPY17_09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_09260 PF00486 Transcriptional regulatory protein, C terminal HPY17_09265 PF17323 Trans-membrane regulatory protein ToxS HPY17_09275 PF12850 Calcineurin-like phosphoesterase superfamily domain HPY17_09280 PF01370 NAD dependent epimerase/dehydratase family HPY17_09280 PF08338 Domain of unknown function (DUF1731) HPY17_09285 PF00106 short chain dehydrogenase HPY17_09290 PF00085 Thioredoxin HPY17_09295 PF01145 SPFH domain / Band 7 family HPY17_09295 PF16200 C-terminal region of band_7 HPY17_09300 PF01957 NfeD-like C-terminal, partner-binding HPY17_09305 PF13411 MerR HTH family regulatory protein HPY17_09315 PF13609 Gram-negative porin HPY17_09320 PF00533 BRCA1 C Terminus (BRCT) domain HPY17_09320 PF03120 NAD-dependent DNA ligase OB-fold domain HPY17_09320 PF01653 NAD-dependent DNA ligase adenylation domain HPY17_09320 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HPY17_09320 PF12826 Helix-hairpin-helix motif HPY17_09325 PF04354 ZipA, C-terminal FtsZ-binding domain HPY17_09335 PF00291 Pyridoxal-phosphate dependent enzyme HPY17_09340 PF00381 PTS HPr component phosphorylation site HPY17_09345 PF00391 PEP-utilising enzyme, mobile domain HPY17_09345 PF05524 PEP-utilising enzyme, N-terminal HPY17_09345 PF02896 PEP-utilising enzyme, TIM barrel domain HPY17_09350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY17_09355 PF01494 FAD binding domain HPY17_09360 PF01938 TRAM domain HPY17_09360 PF04055 Radical SAM superfamily HPY17_09360 PF00919 Uncharacterized protein family UPF0004 HPY17_09365 PF02562 PhoH-like protein HPY17_09370 PF02130 Uncharacterized protein family UPF0054 HPY17_09375 PF00571 CBS domain HPY17_09375 PF03471 Transporter associated domain HPY17_09380 PF00795 Carbon-nitrogen hydrolase HPY17_09385 PF07295 Zinc-ribbon containing domain HPY17_09390 PF00133 tRNA synthetases class I (I, L, M and V) HPY17_09390 PF08264 Anticodon-binding domain of tRNA HPY17_09390 PF13603 Leucyl-tRNA synthetase, Domain 2 HPY17_09395 PF04390 Lipopolysaccharide-assembly HPY17_09400 PF06144 DNA polymerase III, delta subunit HPY17_09400 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HPY17_09410 PF02590 Predicted SPOUT methyltransferase HPY17_09415 PF00905 Penicillin binding protein transpeptidase domain HPY17_09415 PF03717 Penicillin-binding Protein dimerisation domain HPY17_09420 PF01098 Cell cycle protein HPY17_09425 PF05036 Sporulation related domain HPY17_09425 PF03330 Lytic transglycolase HPY17_09430 PF07943 Penicillin-binding protein 5, C-terminal domain HPY17_09430 PF00768 D-alanyl-D-alanine carboxypeptidase HPY17_09435 PF04359 Protein of unknown function (DUF493) HPY17_09440 PF03099 Biotin/lipoate A/B protein ligase family HPY17_09445 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HPY17_09445 PF04055 Radical SAM superfamily HPY17_09455 PF00464 Serine hydroxymethyltransferase HPY17_09475 PF02706 Chain length determinant protein HPY17_09475 PF13614 AAA domain HPY17_09475 PF13807 G-rich domain on putative tyrosine kinase HPY17_09480 PF02563 Polysaccharide biosynthesis/export protein HPY17_09480 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY17_09480 PF10531 SLBB domain HPY17_09490 PF02397 Bacterial sugar transferase HPY17_09505 PF17945 Beta/Gamma crystallin HPY17_09505 PF12561 ToxR activated gene A lipoprotein domain HPY17_09520 PF03808 Glycosyl transferase WecB/TagA/CpsF family HPY17_09530 PF13439 Glycosyltransferase Family 4 HPY17_09530 PF00534 Glycosyl transferases group 1 HPY17_09540 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_09560 PF12464 Maltose acetyltransferase HPY17_09560 PF14602 Hexapeptide repeat of succinyl-transferase HPY17_09565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY17_09565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY17_09565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY17_09570 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY17_09575 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY17_09580 PF00873 AcrB/AcrD/AcrF family HPY17_09585 PF13533 Biotin-lipoyl like HPY17_09610 PF00128 Alpha amylase, catalytic domain HPY17_09610 PF16657 Maltogenic Amylase, C-terminal domain HPY17_09615 PF02378 Phosphotransferase system, EIIC HPY17_09615 PF00367 phosphotransferase system, EIIB HPY17_09620 PF00356 Bacterial regulatory proteins, lacI family HPY17_09630 PF09383 NIL domain HPY17_09630 PF00005 ABC transporter HPY17_09635 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_09640 PF03180 NLPA lipoprotein HPY17_09645 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HPY17_09650 PF07348 Syd protein (SUKH-2) HPY17_09655 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HPY17_09655 PF14489 QueF-like protein HPY17_09665 PF00990 Diguanylate cyclase, GGDEF domain HPY17_09670 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HPY17_09670 PF11892 Domain of unknown function (DUF3412) HPY17_09670 PF03641 Possible lysine decarboxylase HPY17_09675 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY17_09675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY17_09680 PF04241 Protein of unknown function (DUF423) HPY17_09685 PF03466 LysR substrate binding domain HPY17_09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_09690 PF02926 THUMP domain HPY17_09690 PF02568 Thiamine biosynthesis protein (ThiI) HPY17_09695 PF00691 OmpA family HPY17_09695 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPY17_09700 PF01618 MotA/TolQ/ExbB proton channel family HPY17_09705 PF02609 Exonuclease VII small subunit HPY17_09710 PF00348 Polyprenyl synthetase HPY17_09715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPY17_09715 PF02779 Transketolase, pyrimidine binding domain HPY17_09715 PF02780 Transketolase, C-terminal domain HPY17_09720 PF00849 RNA pseudouridylate synthase HPY17_09725 PF04287 tRNA pseudouridine synthase C HPY17_09740 PF13302 Acetyltransferase (GNAT) domain HPY17_09750 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HPY17_09755 PF13006 Insertion element 4 transposase N-terminal HPY17_09755 PF01609 Transposase DDE domain HPY17_09760 PF03806 AbgT putative transporter family HPY17_09765 PF00444 Ribosomal protein L36 HPY17_09770 PF01197 Ribosomal protein L31 HPY17_09775 PF01980 tRNA-methyltransferase O HPY17_09775 PF18389 TrmO C-terminal domain HPY17_09780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY17_09780 PF04073 Aminoacyl-tRNA editing domain HPY17_09780 PF03129 Anticodon binding domain HPY17_09790 PF06786 Uncharacterised protein family (UPF0253) HPY17_09800 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HPY17_09800 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HPY17_09800 PF02769 AIR synthase related protein, C-terminal domain HPY17_09810 PF01464 Transglycosylase SLT domain HPY17_09810 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_09815 PF14437 MafB19-like deaminase HPY17_09820 PF03806 AbgT putative transporter family HPY17_09845 PF00114 Pilin (bacterial filament) HPY17_09845 PF07963 Prokaryotic N-terminal methylation motif HPY17_09850 PF00684 DnaJ central domain HPY17_09850 PF01556 DnaJ C terminal domain HPY17_09850 PF00226 DnaJ domain HPY17_09855 PF00012 Hsp70 protein HPY17_09860 PF01025 GrpE HPY17_09865 PF01513 ATP-NAD kinase HPY17_09870 PF02463 RecF/RecN/SMC N terminal domain HPY17_09875 PF04355 SmpA / OmlA family HPY17_09880 PF03658 RnfH family Ubiquitin HPY17_09885 PF03364 Polyketide cyclase / dehydrase and lipid transport HPY17_09890 PF01668 SmpB protein HPY17_09900 PF18766 SWI2/SNF2 ATPase HPY17_09900 PF11867 Domain of unknown function (DUF3387) HPY17_09900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPY17_09905 PF01420 Type I restriction modification DNA specificity domain HPY17_09910 PF02384 N-6 DNA Methylase HPY17_09930 PF11953 Domain of unknown function (DUF3470) HPY17_09930 PF00037 4Fe-4S binding domain HPY17_09935 PF00588 SpoU rRNA Methylase family HPY17_09935 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY17_09960 PF01266 FAD dependent oxidoreductase HPY17_09965 PF01235 Sodium:alanine symporter family HPY17_09970 PF14863 Alkyl sulfatase dimerisation HPY17_09970 PF14864 Alkyl sulfatase C-terminal HPY17_09970 PF00753 Metallo-beta-lactamase superfamily HPY17_09975 PF03466 LysR substrate binding domain HPY17_09975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_09980 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HPY17_09980 PF01648 4'-phosphopantetheinyl transferase superfamily HPY17_09985 PF00005 ABC transporter HPY17_09990 PF01032 FecCD transport family HPY17_09995 PF01032 FecCD transport family HPY17_10000 PF01497 Periplasmic binding protein HPY17_10015 PF00425 chorismate binding enzyme HPY17_10020 PF00501 AMP-binding enzyme HPY17_10020 PF13193 AMP-binding enzyme C-terminal domain HPY17_10025 PF00550 Phosphopantetheine attachment site HPY17_10025 PF00857 Isochorismatase family HPY17_10030 PF01184 GPR1/FUN34/yaaH family HPY17_10035 PF06483 Chitinase C HPY17_10035 PF00704 Glycosyl hydrolases family 18 HPY17_10040 PF01510 N-acetylmuramoyl-L-alanine amidase HPY17_10045 PF00732 GMC oxidoreductase HPY17_10045 PF05199 GMC oxidoreductase HPY17_10050 PF00117 Glutamine amidotransferase class-I HPY17_10050 PF00958 GMP synthase C terminal domain HPY17_10050 PF02540 NAD synthase HPY17_10055 PF00478 IMP dehydrogenase / GMP reductase domain HPY17_10055 PF00571 CBS domain HPY17_10060 PF02601 Exonuclease VII, large subunit HPY17_10060 PF13742 OB-fold nucleic acid binding domain HPY17_10075 PF01926 50S ribosome-binding GTPase HPY17_10075 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPY17_10080 PF13360 PQQ-like domain HPY17_10085 PF09976 Tetratricopeptide repeat-like domain HPY17_10090 PF13393 Histidyl-tRNA synthetase HPY17_10090 PF03129 Anticodon binding domain HPY17_10095 PF04551 GcpE protein HPY17_10100 PF13464 Domain of unknown function (DUF4115) HPY17_10105 PF04055 Radical SAM superfamily HPY17_10110 PF00334 Nucleoside diphosphate kinase HPY17_10115 PF00883 Cytosol aminopeptidase family, catalytic domain HPY17_10115 PF12404 Peptidase HPY17_10120 PF04384 Iron-sulphur cluster assembly HPY17_10125 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY17_10130 PF00012 Hsp70 protein HPY17_10135 PF00226 DnaJ domain HPY17_10135 PF07743 HSCB C-terminal oligomerisation domain HPY17_10140 PF01521 Iron-sulphur cluster biosynthesis HPY17_10145 PF01592 NifU-like N terminal domain HPY17_10150 PF00266 Aminotransferase class-V HPY17_10155 PF02082 Transcriptional regulator HPY17_10160 PF00588 SpoU rRNA Methylase family HPY17_10165 PF00459 Inositol monophosphatase family HPY17_10170 PF07549 SecD/SecF GG Motif HPY17_10170 PF02355 Protein export membrane protein HPY17_10175 PF07549 SecD/SecF GG Motif HPY17_10175 PF13721 SecD export protein N-terminal TM region HPY17_10175 PF02355 Protein export membrane protein HPY17_10180 PF02699 Preprotein translocase subunit HPY17_10185 PF01702 Queuine tRNA-ribosyltransferase HPY17_10190 PF02547 Queuosine biosynthesis protein HPY17_10195 PF00571 CBS domain HPY17_10200 PF00463 Isocitrate lyase family HPY17_10205 PF01274 Malate synthase HPY17_10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_10210 PF03466 LysR substrate binding domain HPY17_10215 PF00578 AhpC/TSA family HPY17_10215 PF10417 C-terminal domain of 1-Cys peroxiredoxin HPY17_10220 PF03932 CutC family HPY17_10225 PF03976 Polyphosphate kinase 2 (PPK2) HPY17_10230 PF01895 PhoU domain HPY17_10235 PF00005 ABC transporter HPY17_10240 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_10245 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_10250 PF17941 Polyphosphate kinase C-terminal domain 1 HPY17_10250 PF13090 Polyphosphate kinase C-terminal domain 2 HPY17_10250 PF13089 Polyphosphate kinase N-terminal domain HPY17_10250 PF02503 Polyphosphate kinase middle domain HPY17_10255 PF02541 Ppx/GppA phosphatase family HPY17_10260 PF12849 PBP superfamily domain HPY17_10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_10265 PF00989 PAS fold HPY17_10265 PF11808 Phosphate regulon sensor protein PhoR HPY17_10265 PF00512 His Kinase A (phospho-acceptor) domain HPY17_10270 PF00486 Transcriptional regulatory protein, C terminal HPY17_10270 PF00072 Response regulator receiver domain HPY17_10275 PF04381 Putative exonuclease, RdgC HPY17_10285 PF00037 4Fe-4S binding domain HPY17_10290 PF00881 Nitroreductase family HPY17_10330 PF17871 AAA lid domain HPY17_10330 PF02861 Clp amino terminal domain, pathogenicity island component HPY17_10330 PF10431 C-terminal, D2-small domain, of ClpB protein HPY17_10330 PF00004 ATPase family associated with various cellular activities (AAA) HPY17_10330 PF07724 AAA domain (Cdc48 subfamily) HPY17_10340 PF01479 S4 domain HPY17_10340 PF00849 RNA pseudouridylate synthase HPY17_10345 PF13525 Outer membrane lipoprotein HPY17_10350 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY17_10355 PF01817 Chorismate mutase type II HPY17_10355 PF00800 Prephenate dehydratase HPY17_10360 PF13416 Bacterial extracellular solute-binding protein HPY17_10365 PF00990 Diguanylate cyclase, GGDEF domain HPY17_10365 PF00563 EAL domain HPY17_10370 PF01931 Protein of unknown function DUF84 HPY17_10375 PF01371 Trp repressor protein HPY17_10380 PF01464 Transglycosylase SLT domain HPY17_10380 PF14718 Soluble lytic murein transglycosylase L domain HPY17_10385 PF00005 ABC transporter HPY17_10385 PF12848 ABC transporter HPY17_10390 PF07238 PilZ domain HPY17_10395 PF02153 Prephenate dehydrogenase HPY17_10395 PF01817 Chorismate mutase type II HPY17_10400 PF00793 DAHP synthetase I family HPY17_10405 PF07694 5TMR of 5TMR-LYT HPY17_10405 PF06580 Histidine kinase HPY17_10410 PF00072 Response regulator receiver domain HPY17_10410 PF04397 LytTr DNA-binding domain HPY17_10415 PF00933 Glycosyl hydrolase family 3 N terminal domain HPY17_10420 PF03702 Anhydro-N-acetylmuramic acid kinase HPY17_10425 PF13580 SIS domain HPY17_10440 PF02554 Carbon starvation protein CstA HPY17_10445 PF02401 LytB protein HPY17_10450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY17_10455 PF01252 Signal peptidase (SPase) II HPY17_10460 PF00133 tRNA synthetases class I (I, L, M and V) HPY17_10460 PF08264 Anticodon-binding domain of tRNA HPY17_10460 PF06827 Zinc finger found in FPG and IleRS HPY17_10465 PF06574 FAD synthetase HPY17_10465 PF01687 Riboflavin kinase HPY17_10470 PF03023 Lipid II flippase MurJ HPY17_10475 PF01649 Ribosomal protein S20 HPY17_10480 PF01022 Bacterial regulatory protein, arsR family HPY17_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_10485 PF03466 LysR substrate binding domain HPY17_10490 PF02690 Na+/Pi-cotransporter HPY17_10495 PF00303 Thymidylate synthase HPY17_10500 PF01790 Prolipoprotein diacylglyceryl transferase HPY17_10505 PF01925 Sulfite exporter TauE/SafE HPY17_10510 PF01590 GAF domain HPY17_10510 PF05524 PEP-utilising enzyme, N-terminal HPY17_10510 PF02896 PEP-utilising enzyme, TIM barrel domain HPY17_10510 PF00391 PEP-utilising enzyme, mobile domain HPY17_10515 PF00293 NUDIX domain HPY17_10520 PF02976 DNA mismatch repair enzyme MutH HPY17_10525 PF00248 Aldo/keto reductase family HPY17_10535 PF00158 Sigma-54 interaction domain HPY17_10535 PF00072 Response regulator receiver domain HPY17_10535 PF02954 Bacterial regulatory protein, Fis family HPY17_10540 PF00152 tRNA synthetases class II (D, K and N) HPY17_10540 PF01336 OB-fold nucleic acid binding domain HPY17_10550 PF05525 Branched-chain amino acid transport protein HPY17_10555 PF05175 Methyltransferase small domain HPY17_10560 PF00270 DEAD/DEAH box helicase HPY17_10560 PF00271 Helicase conserved C-terminal domain HPY17_10565 PF00009 Elongation factor Tu GTP binding domain HPY17_10565 PF03144 Elongation factor Tu domain 2 HPY17_10565 PF16658 Class II release factor RF3, C-terminal domain HPY17_10570 PF03707 Bacterial signalling protein N terminal repeat HPY17_10570 PF00990 Diguanylate cyclase, GGDEF domain HPY17_10570 PF00563 EAL domain HPY17_10585 PF13508 Acetyltransferase (GNAT) domain HPY17_10590 PF02036 SCP-2 sterol transfer family HPY17_10595 PF00990 Diguanylate cyclase, GGDEF domain HPY17_10595 PF03707 Bacterial signalling protein N terminal repeat HPY17_10595 PF00563 EAL domain HPY17_10600 PF01136 Peptidase family U32 HPY17_10605 PF01136 Peptidase family U32 HPY17_10620 PF01609 Transposase DDE domain HPY17_10620 PF13006 Insertion element 4 transposase N-terminal HPY17_10625 PF13181 Tetratricopeptide repeat HPY17_10625 PF07719 Tetratricopeptide repeat HPY17_10630 PF00013 KH domain HPY17_10630 PF01138 3' exoribonuclease family, domain 1 HPY17_10630 PF00575 S1 RNA binding domain HPY17_10630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HPY17_10630 PF03725 3' exoribonuclease family, domain 2 HPY17_10635 PF00312 Ribosomal protein S15 HPY17_10640 PF01509 TruB family pseudouridylate synthase (N terminal domain) HPY17_10640 PF09157 Pseudouridine synthase II TruB, C-terminal HPY17_10640 PF16198 tRNA pseudouridylate synthase B C-terminal domain HPY17_10645 PF02033 Ribosome-binding factor A HPY17_10650 PF00009 Elongation factor Tu GTP binding domain HPY17_10650 PF08364 Bacterial translation initiation factor IF-2 associated region HPY17_10650 PF04760 Translation initiation factor IF-2, N-terminal region HPY17_10650 PF11987 Translation-initiation factor 2 HPY17_10655 PF00575 S1 RNA binding domain HPY17_10655 PF08529 NusA N-terminal domain HPY17_10655 PF13184 NusA-like KH domain HPY17_10660 PF02576 RimP N-terminal domain HPY17_10660 PF17384 RimP C-terminal SH3 domain HPY17_10675 PF03840 Preprotein translocase SecG subunit HPY17_10680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY17_10680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY17_10680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY17_10680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY17_10685 PF00809 Pterin binding enzyme HPY17_10690 PF06480 FtsH Extracellular HPY17_10690 PF17862 AAA+ lid domain HPY17_10690 PF01434 Peptidase family M41 HPY17_10690 PF00004 ATPase family associated with various cellular activities (AAA) HPY17_10695 PF01728 FtsJ-like methyltransferase HPY17_10700 PF01985 CRS1 / YhbY (CRM) domain HPY17_10705 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY17_10705 PF03449 Transcription elongation factor, N-terminal HPY17_10710 PF13609 Gram-negative porin HPY17_10715 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HPY17_10720 PF00579 tRNA synthetases class I (W and Y) HPY17_10720 PF01479 S4 domain HPY17_10725 PF04225 Opacity-associated protein A LysM-like domain HPY17_10725 PF01551 Peptidase family M23 HPY17_10730 PF00873 AcrB/AcrD/AcrF family HPY17_10740 PF01521 Iron-sulphur cluster biosynthesis HPY17_10745 PF00202 Aminotransferase class-III HPY17_10750 PF01594 AI-2E family transporter HPY17_10755 PF08468 Methyltransferase small domain N-terminal HPY17_10755 PF05175 Methyltransferase small domain HPY17_10760 PF00672 HAMP domain HPY17_10760 PF17149 Periplasmic sensor domain found in signal transduction proteins HPY17_10760 PF01627 Hpt domain HPY17_10760 PF00072 Response regulator receiver domain HPY17_10760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_10760 PF00512 His Kinase A (phospho-acceptor) domain HPY17_10765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY17_10770 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_10775 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY17_10775 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_10780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_10780 PF00005 ABC transporter HPY17_10785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_10785 PF00005 ABC transporter HPY17_10795 PF01869 BadF/BadG/BcrA/BcrD ATPase family HPY17_10800 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY17_10800 PF02838 Glycosyl hydrolase family 20, domain 2 HPY17_10805 PF06165 Glycosyltransferase family 36 HPY17_10805 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HPY17_10810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY17_10810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY17_10810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY17_10810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY17_10815 PF08402 TOBE domain HPY17_10815 PF00005 ABC transporter HPY17_10825 PF13416 Bacterial extracellular solute-binding protein HPY17_10830 PF00909 Ammonium Transporter Family HPY17_10835 PF00543 Nitrogen regulatory protein P-II HPY17_10840 PF06062 Uncharacterised protein family (UPF0231) HPY17_10845 PF06434 Aconitate hydratase 2 N-terminus HPY17_10845 PF11791 Aconitate B N-terminal domain HPY17_10845 PF00330 Aconitase family (aconitate hydratase) HPY17_10850 PF01734 Patatin-like phospholipase HPY17_10855 PF00905 Penicillin binding protein transpeptidase domain HPY17_10855 PF14814 Bifunctional transglycosylase second domain HPY17_10855 PF00912 Transglycosylase HPY17_10860 PF00270 DEAD/DEAH box helicase HPY17_10860 PF04408 Helicase associated domain (HA2) HPY17_10860 PF00271 Helicase conserved C-terminal domain HPY17_10860 PF08482 ATP-dependent helicase C-terminal HPY17_10870 PF17746 SfsA N-terminal OB domain HPY17_10870 PF03749 Sugar fermentation stimulation protein RE domain HPY17_10875 PF01258 Prokaryotic dksA/traR C4-type zinc finger HPY17_10880 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY17_10885 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY17_10885 PF12626 Polymerase A arginine-rich C-terminus HPY17_10885 PF01743 Poly A polymerase head domain HPY17_10890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY17_10895 PF02548 Ketopantoate hydroxymethyltransferase HPY17_10900 PF02569 Pantoate-beta-alanine ligase HPY17_10905 PF01061 ABC-2 type transporter HPY17_10910 PF00005 ABC transporter HPY17_10915 PF01740 STAS domain HPY17_10915 PF00916 Sulfate permease family HPY17_10920 PF00484 Carbonic anhydrase HPY17_10925 PF00156 Phosphoribosyl transferase domain HPY17_10930 PF00440 Bacterial regulatory proteins, tetR family HPY17_10935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY17_10940 PF04348 LppC putative lipoprotein HPY17_10945 PF02021 Uncharacterised protein family UPF0102 HPY17_10950 PF13580 SIS domain HPY17_10955 PF04972 BON domain HPY17_10960 PF04386 Stringent starvation protein B HPY17_10965 PF00043 Glutathione S-transferase, C-terminal domain HPY17_10965 PF02798 Glutathione S-transferase, N-terminal domain HPY17_10970 PF02167 Cytochrome C1 family HPY17_10975 PF00032 Cytochrome b(C-terminal)/b6/petD HPY17_10975 PF00033 Cytochrome b/b6/petB HPY17_10980 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HPY17_10980 PF00355 Rieske [2Fe-2S] domain HPY17_10985 PF00380 Ribosomal protein S9/S16 HPY17_10990 PF00572 Ribosomal protein L13 HPY17_10995 PF03969 AFG1-like ATPase HPY17_11005 PF00595 PDZ domain HPY17_11010 PF13180 PDZ domain HPY17_11015 PF01245 Ribosomal protein L19 HPY17_11020 PF01746 tRNA (Guanine-1)-methyltransferase HPY17_11025 PF05239 PRC-barrel domain HPY17_11025 PF01782 RimM N-terminal domain HPY17_11030 PF00886 Ribosomal protein S16 HPY17_11035 PF02881 SRP54-type protein, helical bundle domain HPY17_11035 PF00448 SRP54-type protein, GTPase domain HPY17_11035 PF02978 Signal peptide binding domain HPY17_11040 PF01578 Cytochrome C assembly protein HPY17_11045 PF00571 CBS domain HPY17_11045 PF03471 Transporter associated domain HPY17_11045 PF01595 Cyclin M transmembrane N-terminal domain HPY17_11050 PF02664 S-Ribosylhomocysteinase (LuxS) HPY17_11055 PF04262 Glutamate-cysteine ligase HPY17_11060 PF00675 Insulinase (Peptidase family M16) HPY17_11060 PF05193 Peptidase M16 inactive domain HPY17_11065 PF09335 SNARE associated Golgi protein HPY17_11075 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY17_11080 PF00364 Biotin-requiring enzyme HPY17_11080 PF00682 HMGL-like HPY17_11080 PF02436 Conserved carboxylase domain HPY17_11085 PF04277 Oxaloacetate decarboxylase, gamma chain HPY17_11130 PF02599 Global regulator protein family HPY17_11135 PF00696 Amino acid kinase family HPY17_11135 PF01842 ACT domain HPY17_11135 PF13840 ACT domain HPY17_11140 PF02272 DHHA1 domain HPY17_11140 PF01411 tRNA synthetases class II (A) HPY17_11140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY17_11145 PF02631 RecX family HPY17_11150 PF00154 recA bacterial DNA recombination protein HPY17_11155 PF02464 Competence-damaged protein HPY17_11160 PF12857 TOBE-like domain HPY17_11160 PF00005 ABC transporter HPY17_11165 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_11170 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_11180 PF00291 Pyridoxal-phosphate dependent enzyme HPY17_11185 PF01624 MutS domain I HPY17_11185 PF05192 MutS domain III HPY17_11185 PF05188 MutS domain II HPY17_11185 PF00488 MutS domain V HPY17_11185 PF05190 MutS family domain IV HPY17_11190 PF04542 Sigma-70 region 2 HPY17_11190 PF00140 Sigma-70 factor, region 1.2 HPY17_11190 PF04539 Sigma-70 region 3 HPY17_11190 PF04545 Sigma-70, region 4 HPY17_11195 PF01551 Peptidase family M23 HPY17_11195 PF01476 LysM domain HPY17_11205 PF01975 Survival protein SurE HPY17_11210 PF01142 tRNA pseudouridine synthase D (TruD) HPY17_11215 PF02542 YgbB family HPY17_11220 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPY17_11225 PF04977 Septum formation initiator HPY17_11230 PF02673 Bacitracin resistance protein BacA HPY17_11235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY17_11240 PF02152 Dihydroneopterin aldolase HPY17_11245 PF02660 Glycerol-3-phosphate acyltransferase HPY17_11250 PF00561 alpha/beta hydrolase fold HPY17_11255 PF00814 Glycoprotease family HPY17_11260 PF01165 Ribosomal protein S21 HPY17_11265 PF09424 Yqey-like protein HPY17_11270 PF10410 DnaB-helicase binding domain of primase HPY17_11270 PF08278 DNA primase DnaG DnaB-binding HPY17_11270 PF08275 DNA primase catalytic core, N-terminal domain HPY17_11270 PF01807 CHC2 zinc finger HPY17_11275 PF00140 Sigma-70 factor, region 1.2 HPY17_11275 PF04546 Sigma-70, non-essential region HPY17_11275 PF04539 Sigma-70 region 3 HPY17_11275 PF04545 Sigma-70, region 4 HPY17_11275 PF04542 Sigma-70 region 2 HPY17_11275 PF03979 Sigma-70 factor, region 1.1 HPY17_11290 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY17_11295 PF01380 SIS domain HPY17_11300 PF00455 DeoR C terminal sensor domain HPY17_11300 PF08220 DeoR-like helix-turn-helix domain HPY17_11305 PF02887 Pyruvate kinase, alpha/beta domain HPY17_11305 PF00224 Pyruvate kinase, barrel domain HPY17_11310 PF04402 Protein of unknown function (DUF541) HPY17_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_11315 PF03466 LysR substrate binding domain HPY17_11320 PF01810 LysE type translocator HPY17_11325 PF00924 Mechanosensitive ion channel HPY17_11325 PF05552 Conserved TM helix HPY17_11330 PF01116 Fructose-bisphosphate aldolase class-II HPY17_11335 PF00162 Phosphoglycerate kinase HPY17_11340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY17_11340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY17_11345 PF07715 TonB-dependent Receptor Plug Domain HPY17_11345 PF00593 TonB dependent receptor HPY17_11350 PF03466 LysR substrate binding domain HPY17_11350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_11355 PF00456 Transketolase, thiamine diphosphate binding domain HPY17_11355 PF02780 Transketolase, C-terminal domain HPY17_11355 PF02779 Transketolase, pyrimidine binding domain HPY17_11360 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPY17_11360 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPY17_11360 PF02772 S-adenosylmethionine synthetase, central domain HPY17_11365 PF10263 SprT-like family HPY17_11365 PF17283 SprT-like zinc ribbon domain HPY17_11370 PF04231 Endonuclease I HPY17_11375 PF04452 RNA methyltransferase HPY17_11380 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HPY17_11380 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HPY17_11385 PF02622 Uncharacterized ACR, COG1678 HPY17_11390 PF03652 Holliday junction resolvase HPY17_11395 PF01479 S4 domain HPY17_11395 PF00579 tRNA synthetases class I (W and Y) HPY17_11405 PF00437 Type II/IV secretion system protein HPY17_11410 PF00437 Type II/IV secretion system protein HPY17_11415 PF01168 Alanine racemase, N-terminal domain HPY17_11420 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPY17_11420 PF03807 NADP oxidoreductase coenzyme F420-dependent HPY17_11425 PF02325 YGGT family HPY17_11430 PF02594 Uncharacterised ACR, YggU family COG1872 HPY17_11440 PF01725 Ham1 family HPY17_11445 PF04055 Radical SAM superfamily HPY17_11445 PF06969 HemN C-terminal domain HPY17_11450 PF04960 Glutaminase HPY17_11455 PF02390 Putative methyltransferase HPY17_11460 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY17_11460 PF14815 NUDIX domain HPY17_11460 PF10576 Iron-sulfur binding domain of endonuclease III HPY17_11460 PF00633 Helix-hairpin-helix motif HPY17_11465 PF04362 Bacterial Fe(2+) trafficking HPY17_11470 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HPY17_11470 PF01464 Transglycosylase SLT domain HPY17_11495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_11495 PF00672 HAMP domain HPY17_11495 PF12729 Four helix bundle sensory module for signal transduction HPY17_11525 PF00226 DnaJ domain HPY17_11525 PF05099 Tellurite resistance protein TerB HPY17_11530 PF03968 OstA-like protein HPY17_11530 PF04453 LPS transport system D HPY17_11535 PF09312 SurA N-terminal domain HPY17_11540 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HPY17_11545 PF00398 Ribosomal RNA adenine dimethylase HPY17_11550 PF04379 ApaG domain HPY17_11555 PF00149 Calcineurin-like phosphoesterase HPY17_11560 PF00186 Dihydrofolate reductase HPY17_11565 PF12821 Threonine/Serine exporter, ThrE HPY17_11570 PF06738 Putative threonine/serine exporter HPY17_11575 PF01926 50S ribosome-binding GTPase HPY17_11575 PF01018 GTP1/OBG HPY17_11580 PF01016 Ribosomal L27 protein HPY17_11585 PF00829 Ribosomal prokaryotic L21 protein HPY17_11590 PF00348 Polyprenyl synthetase HPY17_11595 PF13520 Amino acid permease HPY17_11600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HPY17_11600 PF00056 lactate/malate dehydrogenase, NAD binding domain HPY17_11605 PF01316 Arginine repressor, DNA binding domain HPY17_11605 PF02863 Arginine repressor, C-terminal domain HPY17_11610 PF16868 NMT1-like family HPY17_11620 PF00582 Universal stress protein family HPY17_11635 PF06877 Regulator of ribonuclease activity B HPY17_11645 PF01523 Putative modulator of DNA gyrase HPY17_11650 PF00795 Carbon-nitrogen hydrolase HPY17_11655 PF13502 AsmA-like C-terminal region HPY17_11655 PF13116 Protein of unknown function HPY17_11660 PF00575 S1 RNA binding domain HPY17_11660 PF10150 Ribonuclease E/G family HPY17_11665 PF02545 Maf-like protein HPY17_11670 PF04093 rod shape-determining protein MreD HPY17_11675 PF04085 rod shape-determining protein MreC HPY17_11710 PF00114 Pilin (bacterial filament) HPY17_11710 PF07963 Prokaryotic N-terminal methylation motif HPY17_11715 PF07963 Prokaryotic N-terminal methylation motif HPY17_11715 PF00114 Pilin (bacterial filament) HPY17_11725 PF00482 Type II secretion system (T2SS), protein F HPY17_11730 PF00437 Type II/IV secretion system protein HPY17_11740 PF01471 Putative peptidoglycan binding domain HPY17_11740 PF13401 AAA domain HPY17_11745 PF03958 Bacterial type II/III secretion system short domain HPY17_11745 PF11741 AMIN domain HPY17_11745 PF07660 Secretin and TonB N terminus short domain HPY17_11745 PF00263 Bacterial type II and III secretion system protein HPY17_11765 PF00990 Diguanylate cyclase, GGDEF domain HPY17_11765 PF17157 Gammaproteobacterial periplasmic sensor domain HPY17_11765 PF00563 EAL domain HPY17_11770 PF00436 Single-strand binding protein family HPY17_11775 PF00196 Bacterial regulatory proteins, luxR family HPY17_11780 PF00483 Nucleotidyl transferase HPY17_11785 PF00005 ABC transporter HPY17_11785 PF17760 UvrA interaction domain HPY17_11785 PF17755 UvrA DNA-binding domain HPY17_11795 PF00266 Aminotransferase class-V HPY17_11800 PF01842 ACT domain HPY17_11800 PF00696 Amino acid kinase family HPY17_11810 PF00999 Sodium/hydrogen exchanger family HPY17_11880 PF01507 Phosphoadenosine phosphosulfate reductase family HPY17_11885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HPY17_11885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HPY17_11890 PF00258 Flavodoxin HPY17_11890 PF00667 FAD binding domain HPY17_11890 PF00175 Oxidoreductase NAD-binding domain HPY17_11910 PF09583 Phage shock protein G (Phageshock_PspG) HPY17_11915 PF01207 Dihydrouridine synthase (Dus) HPY17_11920 PF01475 Ferric uptake regulator family HPY17_11930 PF12706 Beta-lactamase superfamily domain HPY17_11935 PF00342 Phosphoglucose isomerase HPY17_11940 PF01894 Uncharacterised protein family UPF0047 HPY17_11945 PF00842 Alanine racemase, C-terminal domain HPY17_11945 PF01168 Alanine racemase, N-terminal domain HPY17_11950 PF03796 DnaB-like helicase C terminal domain HPY17_11950 PF00772 DnaB-like helicase N terminal domain HPY17_11960 PF03948 Ribosomal protein L9, C-terminal domain HPY17_11960 PF01281 Ribosomal protein L9, N-terminal domain HPY17_11965 PF01084 Ribosomal protein S18 HPY17_11970 PF00436 Single-strand binding protein family HPY17_11975 PF01250 Ribosomal protein S6 HPY17_11980 PF00210 Ferritin-like domain HPY17_11985 PF04324 BFD-like [2Fe-2S] binding domain HPY17_11990 PF00009 Elongation factor Tu GTP binding domain HPY17_11990 PF03144 Elongation factor Tu domain 2 HPY17_11990 PF03143 Elongation factor Tu C-terminal domain HPY17_11995 PF03144 Elongation factor Tu domain 2 HPY17_11995 PF00009 Elongation factor Tu GTP binding domain HPY17_11995 PF03764 Elongation factor G, domain IV HPY17_11995 PF00679 Elongation factor G C-terminus HPY17_11995 PF14492 Elongation Factor G, domain II HPY17_12000 PF00177 Ribosomal protein S7p/S5e HPY17_12005 PF00164 Ribosomal protein S12/S23 HPY17_12015 PF02635 DsrE/DsrF-like family HPY17_12020 PF02635 DsrE/DsrF-like family HPY17_12025 PF13309 HTH domain HPY17_12025 PF08348 YheO-like PAS domain HPY17_12030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY17_12030 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY17_12040 PF04102 SlyX HPY17_12045 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HPY17_12050 PF01145 SPFH domain / Band 7 family HPY17_12055 PF01145 SPFH domain / Band 7 family HPY17_12055 PF12221 Bacterial membrane protein N terminal HPY17_12060 PF01926 50S ribosome-binding GTPase HPY17_12060 PF16360 GTP-binding GTPase Middle Region HPY17_12060 PF13167 GTP-binding GTPase N-terminal HPY17_12065 PF17209 Hfq protein HPY17_12075 PF08676 MutL C terminal dimerisation domain HPY17_12075 PF01119 DNA mismatch repair protein, C-terminal domain HPY17_12080 PF01520 N-acetylmuramoyl-L-alanine amidase HPY17_12085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HPY17_12090 PF08331 Domain of unknown function (DUF1730) HPY17_12135 PF00929 Exonuclease HPY17_12140 PF03193 RsgA GTPase HPY17_12145 PF02666 Phosphatidylserine decarboxylase HPY17_12150 PF00939 Sodium:sulfate symporter transmembrane region HPY17_12160 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HPY17_12160 PF01676 Metalloenzyme superfamily HPY17_12165 PF01551 Peptidase family M23 HPY17_12175 PF00440 Bacterial regulatory proteins, tetR family HPY17_12175 PF08360 QacR-like protein, C-terminal region HPY17_12180 PF01208 Uroporphyrinogen decarboxylase (URO-D) HPY17_12185 PF00293 NUDIX domain HPY17_12185 PF09297 NADH pyrophosphatase zinc ribbon domain HPY17_12190 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HPY17_12195 PF04997 RNA polymerase Rpb1, domain 1 HPY17_12195 PF04998 RNA polymerase Rpb1, domain 5 HPY17_12195 PF00623 RNA polymerase Rpb1, domain 2 HPY17_12195 PF04983 RNA polymerase Rpb1, domain 3 HPY17_12195 PF05000 RNA polymerase Rpb1, domain 4 HPY17_12200 PF00562 RNA polymerase Rpb2, domain 6 HPY17_12200 PF04565 RNA polymerase Rpb2, domain 3 HPY17_12200 PF04561 RNA polymerase Rpb2, domain 2 HPY17_12200 PF04563 RNA polymerase beta subunit HPY17_12200 PF04560 RNA polymerase Rpb2, domain 7 HPY17_12200 PF10385 RNA polymerase beta subunit external 1 domain HPY17_12205 PF16320 Ribosomal protein L7/L12 dimerisation domain HPY17_12205 PF00542 Ribosomal protein L7/L12 C-terminal domain HPY17_12210 PF00466 Ribosomal protein L10 HPY17_12215 PF00687 Ribosomal protein L1p/L10e family HPY17_12220 PF00298 Ribosomal protein L11, RNA binding domain HPY17_12220 PF03946 Ribosomal protein L11, N-terminal domain HPY17_12225 PF02357 Transcription termination factor nusG HPY17_12225 PF00467 KOW motif HPY17_12230 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HPY17_12235 PF00009 Elongation factor Tu GTP binding domain HPY17_12235 PF03144 Elongation factor Tu domain 2 HPY17_12235 PF03143 Elongation factor Tu C-terminal domain HPY17_12260 PF00485 Phosphoribulokinase / Uridine kinase family HPY17_12265 PF03099 Biotin/lipoate A/B protein ligase family HPY17_12265 PF02237 Biotin protein ligase C terminal domain HPY17_12265 PF08279 HTH domain HPY17_12270 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPY17_12270 PF01565 FAD binding domain HPY17_12280 PF13091 PLD-like domain HPY17_12315 PF00175 Oxidoreductase NAD-binding domain HPY17_12320 PF00970 Oxidoreductase FAD-binding domain HPY17_12320 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY17_12320 PF00175 Oxidoreductase NAD-binding domain HPY17_12325 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HPY17_12335 PF07497 Rho termination factor, RNA-binding domain HPY17_12335 PF07498 Rho termination factor, N-terminal domain HPY17_12335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY17_12340 PF00085 Thioredoxin HPY17_12345 PF00270 DEAD/DEAH box helicase HPY17_12345 PF00271 Helicase conserved C-terminal domain HPY17_12350 PF02541 Ppx/GppA phosphatase family HPY17_12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_12355 PF00512 His Kinase A (phospho-acceptor) domain HPY17_12355 PF09456 RcsC Alpha-Beta-Loop (ABL) HPY17_12355 PF00072 Response regulator receiver domain HPY17_12360 PF12832 MFS_1 like family HPY17_12375 PF00501 AMP-binding enzyme HPY17_12375 PF13193 AMP-binding enzyme C-terminal domain HPY17_12375 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY17_12380 PF01220 Dehydroquinase class II HPY17_12385 PF00364 Biotin-requiring enzyme HPY17_12390 PF00289 Biotin carboxylase, N-terminal domain HPY17_12390 PF02785 Biotin carboxylase C-terminal domain HPY17_12390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY17_12400 PF01207 Dihydrouridine synthase (Dus) HPY17_12405 PF02954 Bacterial regulatory protein, Fis family HPY17_12410 PF02661 Fic/DOC family HPY17_12410 PF13784 Fic/DOC family N-terminal HPY17_12415 PF00356 Bacterial regulatory proteins, lacI family HPY17_12415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY17_12420 PF11647 Membrane Localization Domain HPY17_12425 PF00920 Dehydratase family HPY17_12430 PF01202 Shikimate kinase HPY17_12435 PF02447 GntP family permease HPY17_12440 PF01081 KDPG and KHG aldolase HPY17_12445 PF00593 TonB dependent receptor HPY17_12445 PF07715 TonB-dependent Receptor Plug Domain HPY17_12460 PF00672 HAMP domain HPY17_12460 PF17200 Single Cache domain 2 HPY17_12460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_12465 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY17_12465 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY17_12465 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY17_12470 PF13520 Amino acid permease HPY17_12475 PF18500 CadC C-terminal domain 1 HPY17_12475 PF00486 Transcriptional regulatory protein, C terminal HPY17_12480 PF13411 MerR HTH family regulatory protein HPY17_12490 PF02142 MGS-like domain HPY17_12490 PF01808 AICARFT/IMPCHase bienzyme HPY17_12495 PF02844 Phosphoribosylglycinamide synthetase, N domain HPY17_12495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPY17_12495 PF02843 Phosphoribosylglycinamide synthetase, C domain HPY17_12505 PF00216 Bacterial DNA-binding protein HPY17_12510 PF00571 CBS domain HPY17_12510 PF01595 Cyclin M transmembrane N-terminal domain HPY17_12520 PF02281 Transposase Tn5 dimerisation domain HPY17_12520 PF14706 Transposase DNA-binding HPY17_12520 PF01609 Transposase DDE domain HPY17_12525 PF04222 Protein of unknown function (DUF416) HPY17_12530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY17_12535 PF03167 Uracil DNA glycosylase superfamily HPY17_12540 PF00924 Mechanosensitive ion channel HPY17_12545 PF10996 Beta-Casp domain HPY17_12545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HPY17_12545 PF00753 Metallo-beta-lactamase superfamily HPY17_12555 PF00953 Glycosyl transferase family 4 HPY17_12560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY17_12560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY17_12560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY17_12565 PF01238 Phosphomannose isomerase type I HPY17_12570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY17_12570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY17_12570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY17_12570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY17_12575 PF01050 Mannose-6-phosphate isomerase HPY17_12575 PF00483 Nucleotidyl transferase HPY17_12590 PF13439 Glycosyltransferase Family 4 HPY17_12590 PF00534 Glycosyl transferases group 1 HPY17_12605 PF00535 Glycosyl transferase family 2 HPY17_12635 PF13807 G-rich domain on putative tyrosine kinase HPY17_12635 PF13614 AAA domain HPY17_12635 PF02706 Chain length determinant protein HPY17_12640 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY17_12645 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY17_12645 PF02563 Polysaccharide biosynthesis/export protein HPY17_12645 PF10531 SLBB domain HPY17_12655 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HPY17_12665 PF06082 Exopolysaccharide biosynthesis protein YbjH HPY17_12675 PF02397 Bacterial sugar transferase HPY17_12680 PF01370 NAD dependent epimerase/dehydratase family HPY17_12685 PF02719 Polysaccharide biosynthesis protein HPY17_12695 PF05159 Capsule polysaccharide biosynthesis protein HPY17_12700 PF00535 Glycosyl transferase family 2 HPY17_12705 PF00005 ABC transporter HPY17_12705 PF00664 ABC transporter transmembrane region HPY17_12715 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HPY17_12725 PF04321 RmlD substrate binding domain HPY17_12730 PF00483 Nucleotidyl transferase HPY17_12735 PF16363 GDP-mannose 4,6 dehydratase HPY17_12740 PF01370 NAD dependent epimerase/dehydratase family HPY17_12750 PF00535 Glycosyl transferase family 2 HPY17_12755 PF00457 Glycosyl hydrolases family 11 HPY17_12755 PF01522 Polysaccharide deacetylase HPY17_12760 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY17_12765 PF04488 Glycosyltransferase sugar-binding region containing DXD motif HPY17_12770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HPY17_12775 PF00583 Acetyltransferase (GNAT) family HPY17_12780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPY17_12800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY17_12805 PF00535 Glycosyl transferase family 2 HPY17_12810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY17_12815 PF01467 Cytidylyltransferase-like HPY17_12820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HPY17_12820 PF06827 Zinc finger found in FPG and IleRS HPY17_12820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HPY17_12830 PF00471 Ribosomal protein L33 HPY17_12835 PF00830 Ribosomal L28 family HPY17_12840 PF04002 RadC-like JAB domain HPY17_12845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_12845 PF00672 HAMP domain HPY17_12845 PF17200 Single Cache domain 2 HPY17_12850 PF02441 Flavoprotein HPY17_12850 PF04127 DNA / pantothenate metabolism flavoprotein HPY17_12860 PF00440 Bacterial regulatory proteins, tetR family HPY17_12865 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY17_12870 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY17_12875 PF00156 Phosphoribosyl transferase domain HPY17_12880 PF03725 3' exoribonuclease family, domain 2 HPY17_12880 PF01138 3' exoribonuclease family, domain 1 HPY17_12885 PF08340 Domain of unknown function (DUF1732) HPY17_12885 PF03755 YicC-like family, N-terminal region HPY17_12940 PF00145 C-5 cytosine-specific DNA methylase HPY17_12970 PF13411 MerR HTH family regulatory protein HPY17_12990 PF03350 Uncharacterized protein family, UPF0114 HPY17_12995 PF13006 Insertion element 4 transposase N-terminal HPY17_12995 PF01609 Transposase DDE domain HPY17_13000 PF00267 Gram-negative porin HPY17_13005 PF00367 phosphotransferase system, EIIB HPY17_13005 PF02378 Phosphotransferase system, EIIC HPY17_13010 PF13580 SIS domain HPY17_13015 PF01380 SIS domain HPY17_13015 PF01418 Helix-turn-helix domain, rpiR family HPY17_13025 PF16124 RecQ zinc-binding HPY17_13025 PF00570 HRDC domain HPY17_13025 PF09382 RQC domain HPY17_13025 PF00271 Helicase conserved C-terminal domain HPY17_13025 PF00270 DEAD/DEAH box helicase HPY17_13030 PF00892 EamA-like transporter family HPY17_13040 PF12833 Helix-turn-helix domain HPY17_13045 PF01810 LysE type translocator HPY17_13050 PF13361 UvrD-like helicase C-terminal domain HPY17_13050 PF00580 UvrD/REP helicase N-terminal domain HPY17_13055 PF01432 Peptidase family M3 HPY17_13060 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HPY17_13065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY17_13065 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_13075 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY17_13075 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_13085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY17_13090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_13090 PF00005 ABC transporter HPY17_13125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY17_13165 PF00437 Type II/IV secretion system protein HPY17_13180 PF04972 BON domain HPY17_13180 PF13629 Pilus formation protein N terminal region HPY17_13180 PF00263 Bacterial type II and III secretion system protein HPY17_13210 PF00580 UvrD/REP helicase N-terminal domain HPY17_13210 PF13361 UvrD-like helicase C-terminal domain HPY17_13215 PF00440 Bacterial regulatory proteins, tetR family HPY17_13220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY17_13225 PF00873 AcrB/AcrD/AcrF family HPY17_13230 PF04380 Membrane fusogenic activity HPY17_13235 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HPY17_13235 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HPY17_13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_13240 PF03466 LysR substrate binding domain HPY17_13305 PF12724 Flavodoxin domain HPY17_13310 PF02386 Cation transport protein HPY17_13315 PF09186 Domain of unknown function (DUF1949) HPY17_13315 PF01205 Uncharacterized protein family UPF0029 HPY17_13320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY17_13320 PF00378 Enoyl-CoA hydratase/isomerase HPY17_13320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY17_13325 PF00108 Thiolase, N-terminal domain HPY17_13325 PF02803 Thiolase, C-terminal domain HPY17_13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_13330 PF03466 LysR substrate binding domain HPY17_13335 PF07690 Major Facilitator Superfamily HPY17_13340 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_13340 PF12804 MobA-like NTP transferase domain HPY17_13345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HPY17_13345 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HPY17_13350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY17_13350 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY17_13355 PF00231 ATP synthase HPY17_13360 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY17_13360 PF00306 ATP synthase alpha/beta chain, C terminal domain HPY17_13360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY17_13365 PF00213 ATP synthase delta (OSCP) subunit HPY17_13370 PF00430 ATP synthase B/B' CF(0) HPY17_13375 PF00137 ATP synthase subunit C HPY17_13380 PF00119 ATP synthase A chain HPY17_13385 PF03899 ATP synthase I chain HPY17_13390 PF17762 HTH domain found in ParB protein HPY17_13390 PF02195 ParB-like nuclease domain HPY17_13395 PF13614 AAA domain HPY17_13400 PF02527 rRNA small subunit methyltransferase G HPY17_13405 PF01134 Glucose inhibited division protein A HPY17_13405 PF13932 GidA associated domain HPY17_13410 PF00258 Flavodoxin HPY17_13420 PF00239 Resolvase, N terminal domain HPY17_13420 PF02796 Helix-turn-helix domain of resolvase HPY17_13430 PF17728 BsuBI/PstI restriction endonuclease HTH domain HPY17_13430 PF06616 BsuBI/PstI restriction endonuclease domain HPY17_13470 PF06122 Conjugative relaxosome accessory transposon protein HPY17_13505 PF02899 Phage integrase, N-terminal SAM-like domain HPY17_13505 PF00589 Phage integrase family HPY17_13510 PF10396 GTP-binding protein TrmE N-terminus HPY17_13510 PF12631 MnmE helical domain HPY17_13510 PF01926 50S ribosome-binding GTPase HPY17_13515 PF02096 60Kd inner membrane protein HPY17_13515 PF14849 YidC periplasmic domain HPY17_13520 PF01809 Putative membrane protein insertion efficiency factor HPY17_13525 PF00825 Ribonuclease P HPY17_13530 PF00468 Ribosomal protein L34 HPY17_13535 PF00005 ABC transporter HPY17_13540 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_13545 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_13550 PF02195 ParB-like nuclease domain HPY17_13550 PF08775 ParB family HPY17_13555 PF18607 ParA helix turn helix domain HPY17_13555 PF13614 AAA domain HPY17_13580 PF01709 Transcriptional regulator HPY17_13585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HPY17_13585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY17_13590 PF00672 HAMP domain HPY17_13590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_13590 PF17200 Single Cache domain 2 HPY17_13595 PF10928 Protein of unknown function (DUF2810) HPY17_13600 PF17874 MalT-like TPR region HPY17_13600 PF00196 Bacterial regulatory proteins, luxR family HPY17_13605 PF00343 Carbohydrate phosphorylase HPY17_13610 PF02446 4-alpha-glucanotransferase HPY17_13615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY17_13615 PF02806 Alpha amylase, C-terminal all-beta domain HPY17_13615 PF00128 Alpha amylase, catalytic domain HPY17_13620 PF05638 Type VI secretion system effector, Hcp HPY17_13625 PF04717 Type VI secretion system, phage-baseplate injector HPY17_13625 PF16671 Actin cross-linking domain HPY17_13635 PF01476 LysM domain HPY17_13650 PF00842 Alanine racemase, C-terminal domain HPY17_13650 PF01168 Alanine racemase, N-terminal domain HPY17_13650 PF01757 Acyltransferase family HPY17_13660 PF00939 Sodium:sulfate symporter transmembrane region HPY17_13665 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY17_13670 PF00704 Glycosyl hydrolases family 18 HPY17_13670 PF08329 Chitinase A, N-terminal domain HPY17_13695 PF01569 PAP2 superfamily HPY17_13700 PF02225 PA domain HPY17_13700 PF04389 Peptidase family M28 HPY17_13705 PF01609 Transposase DDE domain HPY17_13705 PF13006 Insertion element 4 transposase N-terminal HPY17_13710 PF00375 Sodium:dicarboxylate symporter family HPY17_13720 PF02630 SCO1/SenC HPY17_13735 PF03616 Sodium/glutamate symporter HPY17_13740 PF12945 Flagellar protein YcgR HPY17_13740 PF07238 PilZ domain HPY17_13755 PF00529 HlyD membrane-fusion protein of T1SS HPY17_13755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY17_13760 PF11742 Protein of unknown function (DUF3302) HPY17_13765 PF00990 Diguanylate cyclase, GGDEF domain HPY17_13780 PF01048 Phosphorylase superfamily HPY17_13785 PF08349 Protein of unknown function (DUF1722) HPY17_13790 PF13411 MerR HTH family regulatory protein HPY17_13795 PF00875 DNA photolyase HPY17_13795 PF03441 FAD binding domain of DNA photolyase HPY17_13800 PF17969 L,D-transpeptidase C-terminal domain HPY17_13800 PF03734 L,D-transpeptidase catalytic domain HPY17_13800 PF01476 LysM domain HPY17_13810 PF00270 DEAD/DEAH box helicase HPY17_13810 PF00271 Helicase conserved C-terminal domain HPY17_13815 PF00326 Prolyl oligopeptidase family HPY17_13815 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HPY17_13820 PF00593 TonB dependent receptor HPY17_13820 PF07715 TonB-dependent Receptor Plug Domain HPY17_13840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_13840 PF00672 HAMP domain HPY17_13840 PF12729 Four helix bundle sensory module for signal transduction HPY17_13845 PF12849 PBP superfamily domain HPY17_13850 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_13855 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_13860 PF00005 ABC transporter HPY17_13865 PF00990 Diguanylate cyclase, GGDEF domain HPY17_13865 PF00072 Response regulator receiver domain HPY17_13880 PF01740 STAS domain HPY17_13880 PF00916 Sulfate permease family HPY17_13890 PF01551 Peptidase family M23 HPY17_13890 PF01476 LysM domain HPY17_13890 PF08525 Opacity-associated protein A N-terminal motif HPY17_13895 PF03707 Bacterial signalling protein N terminal repeat HPY17_13895 PF00990 Diguanylate cyclase, GGDEF domain HPY17_13895 PF00563 EAL domain HPY17_13895 PF13188 PAS domain HPY17_13900 PF03466 LysR substrate binding domain HPY17_13900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_13905 PF07690 Major Facilitator Superfamily HPY17_13910 PF00376 MerR family regulatory protein HPY17_13910 PF09278 MerR, DNA binding HPY17_13925 PF00375 Sodium:dicarboxylate symporter family HPY17_13940 PF02001 Protein of unknown function DUF134 HPY17_13960 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY17_13960 PF01447 Thermolysin metallopeptidase, catalytic domain HPY17_13960 PF01483 Proprotein convertase P-domain HPY17_13960 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY17_13970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HPY17_13970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HPY17_13975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPY17_13975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY17_13980 PF00581 Rhodanese-like domain HPY17_13985 PF00563 EAL domain HPY17_13985 PF00196 Bacterial regulatory proteins, luxR family HPY17_13990 PF13419 Haloacid dehalogenase-like hydrolase HPY17_13995 PF01740 STAS domain HPY17_13995 PF00916 Sulfate permease family HPY17_14000 PF00849 RNA pseudouridylate synthase HPY17_14060 PF17871 AAA lid domain HPY17_14060 PF10431 C-terminal, D2-small domain, of ClpB protein HPY17_14060 PF07724 AAA domain (Cdc48 subfamily) HPY17_14060 PF00004 ATPase family associated with various cellular activities (AAA) HPY17_14105 PF05025 RbsD / FucU transport protein family HPY17_14110 PF00005 ABC transporter HPY17_14115 PF02653 Branched-chain amino acid transport system / permease component HPY17_14120 PF13407 Periplasmic binding protein domain HPY17_14125 PF00294 pfkB family carbohydrate kinase HPY17_14130 PF00356 Bacterial regulatory proteins, lacI family HPY17_14135 PF04973 Nicotinamide mononucleotide transporter HPY17_14140 PF01048 Phosphorylase superfamily HPY17_14150 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY17_14155 PF07690 Major Facilitator Superfamily HPY17_14170 PF02743 Cache domain HPY17_14170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_14170 PF00512 His Kinase A (phospho-acceptor) domain HPY17_14175 PF02954 Bacterial regulatory protein, Fis family HPY17_14175 PF00072 Response regulator receiver domain HPY17_14175 PF00158 Sigma-54 interaction domain HPY17_14190 PF01266 FAD dependent oxidoreductase HPY17_14195 PF12561 ToxR activated gene A lipoprotein domain HPY17_14195 PF00041 Fibronectin type III domain HPY17_14200 PF01327 Polypeptide deformylase HPY17_14205 PF00042 Globin HPY17_14205 PF00970 Oxidoreductase FAD-binding domain HPY17_14205 PF00175 Oxidoreductase NAD-binding domain HPY17_14210 PF03334 Na+/H+ antiporter subunit HPY17_14215 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HPY17_14235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY17_14235 PF13244 Domain of unknown function (DUF4040) HPY17_14235 PF00361 Proton-conducting membrane transporter HPY17_14235 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HPY17_14245 PF00582 Universal stress protein family HPY17_14250 PF03222 Tryptophan/tyrosine permease family HPY17_14255 PF01212 Beta-eliminating lyase HPY17_14265 PF12843 Putative quorum-sensing-regulated virulence factor HPY17_14275 PF08448 PAS fold HPY17_14275 PF00990 Diguanylate cyclase, GGDEF domain HPY17_14275 PF00563 EAL domain HPY17_14280 PF00313 'Cold-shock' DNA-binding domain HPY17_14295 PF13519 von Willebrand factor type A domain HPY17_14295 PF07584 Aerotolerance regulator N-terminal HPY17_14310 PF01882 Protein of unknown function DUF58 HPY17_14315 PF17863 AAA lid domain HPY17_14315 PF07726 ATPase family associated with various cellular activities (AAA) HPY17_14320 PF00672 HAMP domain HPY17_14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_14320 PF02743 Cache domain HPY17_14335 PF07662 Na+ dependent nucleoside transporter C-terminus HPY17_14335 PF01773 Na+ dependent nucleoside transporter N-terminus HPY17_14335 PF07670 Nucleoside recognition HPY17_14340 PF01546 Peptidase family M20/M25/M40 HPY17_14340 PF07687 Peptidase dimerisation domain HPY17_14350 PF01590 GAF domain HPY17_14350 PF00158 Sigma-54 interaction domain HPY17_14355 PF00175 Oxidoreductase NAD-binding domain HPY17_14355 PF00970 Oxidoreductase FAD-binding domain HPY17_14355 PF00042 Globin HPY17_14360 PF00313 'Cold-shock' DNA-binding domain HPY17_14365 PF03889 Alternative ribosome-rescue factor A HPY17_14380 PF00072 Response regulator receiver domain HPY17_14390 PF03853 YjeF-related protein N-terminus HPY17_14390 PF01256 Carbohydrate kinase HPY17_14395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY17_14395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY17_14405 PF07885 Ion channel HPY17_14415 PF00478 IMP dehydrogenase / GMP reductase domain HPY17_14420 PF00271 Helicase conserved C-terminal domain HPY17_14425 PF08878 Domain of unknown function (DUF1837) HPY17_14425 PF14130 Domain of unknown function (DUF4297) HPY17_14430 PF00271 Helicase conserved C-terminal domain HPY17_14430 PF00270 DEAD/DEAH box helicase HPY17_14435 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY17_14440 PF02540 NAD synthase HPY17_14450 PF11849 Domain of unknown function (DUF3369) HPY17_14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_14455 PF00512 His Kinase A (phospho-acceptor) domain HPY17_14455 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_14465 PF03553 Na+/H+ antiporter family HPY17_14470 PF07690 Major Facilitator Superfamily HPY17_14480 PF00990 Diguanylate cyclase, GGDEF domain HPY17_14480 PF05230 MASE2 domain HPY17_14485 PF00657 GDSL-like Lipase/Acylhydrolase HPY17_14490 PF16458 Beta-prism lectin HPY17_14490 PF12563 Hemolytic toxin N terminal HPY17_14490 PF07968 Leukocidin/Hemolysin toxin family HPY17_14500 PF00561 alpha/beta hydrolase fold HPY17_14505 PF03280 Proteobacterial lipase chaperone protein HPY17_14510 PF05547 Immune inhibitor A peptidase M6 HPY17_14510 PF00801 PKD domain HPY17_14530 PF01032 FecCD transport family HPY17_14535 PF01032 FecCD transport family HPY17_14540 PF00005 ABC transporter HPY17_14545 PF12833 Helix-turn-helix domain HPY17_14550 PF00593 TonB dependent receptor HPY17_14550 PF07715 TonB-dependent Receptor Plug Domain HPY17_14560 PF00871 Acetokinase family HPY17_14575 PF00005 ABC transporter HPY17_14585 PF01032 FecCD transport family HPY17_14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_14595 PF03466 LysR substrate binding domain HPY17_14605 PF00672 HAMP domain HPY17_14605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_14605 PF00512 His Kinase A (phospho-acceptor) domain HPY17_14610 PF00486 Transcriptional regulatory protein, C terminal HPY17_14610 PF00072 Response regulator receiver domain HPY17_14620 PF01261 Xylose isomerase-like TIM barrel HPY17_14625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY17_14635 PF00596 Class II Aldolase and Adducin N-terminal domain HPY17_14640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY17_14645 PF03611 PTS system sugar-specific permease component HPY17_14650 PF08220 DeoR-like helix-turn-helix domain HPY17_14650 PF00455 DeoR C terminal sensor domain HPY17_14665 PF00128 Alpha amylase, catalytic domain HPY17_14670 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_14685 PF00072 Response regulator receiver domain HPY17_14685 PF00486 Transcriptional regulatory protein, C terminal HPY17_14690 PF00672 HAMP domain HPY17_14690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_14690 PF00512 His Kinase A (phospho-acceptor) domain HPY17_14725 PF00672 HAMP domain HPY17_14725 PF02743 Cache domain HPY17_14725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_14730 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY17_14735 PF07943 Penicillin-binding protein 5, C-terminal domain HPY17_14735 PF00768 D-alanyl-D-alanine carboxypeptidase HPY17_14750 PF00194 Eukaryotic-type carbonic anhydrase HPY17_14755 PF02347 Glycine cleavage system P-protein HPY17_14760 PF01597 Glycine cleavage H-protein HPY17_14765 PF00464 Serine hydroxymethyltransferase HPY17_14775 PF01571 Aminomethyltransferase folate-binding domain HPY17_14775 PF08669 Glycine cleavage T-protein C-terminal barrel domain HPY17_14780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY17_14780 PF03129 Anticodon binding domain HPY17_14780 PF02824 TGS domain HPY17_14780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY17_14785 PF00707 Translation initiation factor IF-3, C-terminal domain HPY17_14785 PF05198 Translation initiation factor IF-3, N-terminal domain HPY17_14790 PF01632 Ribosomal protein L35 HPY17_14795 PF00453 Ribosomal protein L20 HPY17_14800 PF00589 Phage integrase family HPY17_14800 PF13495 Phage integrase, N-terminal SAM-like domain HPY17_14920 PF02567 Phenazine biosynthesis-like protein HPY17_15025 PF01906 Putative heavy-metal-binding HPY17_15045 PF02567 Phenazine biosynthesis-like protein HPY17_15055 PF04229 GrpB protein HPY17_15115 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HPY17_15145 PF00145 C-5 cytosine-specific DNA methylase HPY17_15155 PF01381 Helix-turn-helix HPY17_15260 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HPY17_15270 PF02567 Phenazine biosynthesis-like protein HPY17_15275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY17_15320 PF04320 Protein with unknown function (DUF469) HPY17_15385 PF02567 Phenazine biosynthesis-like protein HPY17_15395 PF13737 Transposase DDE domain HPY17_15665 PF13302 Acetyltransferase (GNAT) domain HPY17_15860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY17_15885 PF08212 Lipocalin-like domain HPY17_15900 PF04229 GrpB protein HPY17_15915 PF00561 alpha/beta hydrolase fold HPY17_16005 PF00583 Acetyltransferase (GNAT) family HPY17_16050 PF01872 RibD C-terminal domain HPY17_16050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY17_16055 PF00293 NUDIX domain HPY17_16095 PF02016 LD-carboxypeptidase N-terminal domain HPY17_16095 PF17676 LD-carboxypeptidase C-terminal domain HPY17_16130 PF02567 Phenazine biosynthesis-like protein HPY17_16290 PF02016 LD-carboxypeptidase N-terminal domain HPY17_16290 PF17676 LD-carboxypeptidase C-terminal domain HPY17_16315 PF02567 Phenazine biosynthesis-like protein HPY17_16325 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system HPY17_16330 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA HPY17_16395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY17_16425 PF07859 alpha/beta hydrolase fold HPY17_16430 PF02567 Phenazine biosynthesis-like protein HPY17_16455 PF09722 Protein of unknown function (DUF2384) HPY17_16460 PF02567 Phenazine biosynthesis-like protein HPY17_16480 PF00293 NUDIX domain HPY17_16485 PF04229 GrpB protein HPY17_16495 PF01872 RibD C-terminal domain HPY17_16495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY17_16525 PF08212 Lipocalin-like domain HPY17_16575 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY17_16575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY17_16580 PF00691 OmpA family HPY17_16580 PF05736 OprF membrane domain HPY17_16585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_16585 PF00672 HAMP domain HPY17_16585 PF17200 Single Cache domain 2 HPY17_16590 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HPY17_16590 PF01266 FAD dependent oxidoreductase HPY17_16595 PF00294 pfkB family carbohydrate kinase HPY17_16600 PF00251 Glycosyl hydrolases family 32 N-terminal domain HPY17_16600 PF08244 Glycosyl hydrolases family 32 C terminal HPY17_16610 PF02378 Phosphotransferase system, EIIC HPY17_16610 PF00367 phosphotransferase system, EIIB HPY17_16655 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY17_16655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY17_16670 PF04143 Sulphur transport HPY17_16685 PF00873 AcrB/AcrD/AcrF family HPY17_16690 PF00881 Nitroreductase family HPY17_16695 PF03992 Antibiotic biosynthesis monooxygenase HPY17_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_16700 PF03466 LysR substrate binding domain HPY17_16710 PF06942 GlpM protein HPY17_16725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY17_16725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY17_16745 PF01609 Transposase DDE domain HPY17_16745 PF02281 Transposase Tn5 dimerisation domain HPY17_16745 PF14706 Transposase DNA-binding HPY17_16755 PF01447 Thermolysin metallopeptidase, catalytic domain HPY17_16755 PF04151 Bacterial pre-peptidase C-terminal domain HPY17_16755 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY17_16755 PF03413 Peptidase propeptide and YPEB domain HPY17_16755 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY17_16760 PF02780 Transketolase, C-terminal domain HPY17_16760 PF00456 Transketolase, thiamine diphosphate binding domain HPY17_16760 PF02779 Transketolase, pyrimidine binding domain HPY17_16765 PF00923 Transaldolase/Fructose-6-phosphate aldolase HPY17_16770 PF04198 Putative sugar-binding domain HPY17_16775 PF00704 Glycosyl hydrolases family 18 HPY17_16775 PF08329 Chitinase A, N-terminal domain HPY17_16780 PF00581 Rhodanese-like domain HPY17_16790 PF00899 ThiF family HPY17_16795 PF03453 MoeA N-terminal region (domain I and II) HPY17_16795 PF03454 MoeA C-terminal region (domain IV) HPY17_16795 PF00994 Probable molybdopterin binding domain HPY17_16800 PF01227 GTP cyclohydrolase I HPY17_16805 PF01641 SelR domain HPY17_16805 PF01625 Peptide methionine sulfoxide reductase HPY17_16810 PF01268 Formate--tetrahydrofolate ligase HPY17_16815 PF01741 Large-conductance mechanosensitive channel, MscL HPY17_16830 PF13419 Haloacid dehalogenase-like hydrolase HPY17_16835 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY17_16835 PF14760 Rnk N-terminus HPY17_16840 PF13419 Haloacid dehalogenase-like hydrolase HPY17_16850 PF00266 Aminotransferase class-V HPY17_16860 PF00005 ABC transporter HPY17_16865 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_16870 PF00392 Bacterial regulatory proteins, gntR family HPY17_16870 PF07702 UTRA domain HPY17_16880 PF00854 POT family HPY17_16905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY17_16910 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_16915 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY17_16915 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_16920 PF00005 ABC transporter HPY17_16920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_16925 PF12804 MobA-like NTP transferase domain HPY17_16925 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_16925 PF03479 Plants and Prokaryotes Conserved (PCC) domain HPY17_16940 PF00043 Glutathione S-transferase, C-terminal domain HPY17_16940 PF02798 Glutathione S-transferase, N-terminal domain HPY17_16960 PF03061 Thioesterase superfamily HPY17_16970 PF12793 Sugar transport-related sRNA regulator N-term HPY17_16970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY17_16975 PF00593 TonB dependent receptor HPY17_16975 PF04886 PT repeat HPY17_16975 PF07715 TonB-dependent Receptor Plug Domain HPY17_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_16980 PF03466 LysR substrate binding domain HPY17_16985 PF13607 Succinyl-CoA ligase like flavodoxin domain HPY17_16985 PF00583 Acetyltransferase (GNAT) family HPY17_16985 PF13380 CoA binding domain HPY17_16995 PF01820 D-ala D-ala ligase N-terminus HPY17_16995 PF07478 D-ala D-ala ligase C-terminus HPY17_17005 PF01253 Translation initiation factor SUI1 HPY17_17010 PF03701 Uncharacterised protein family (UPF0181) HPY17_17025 PF00072 Response regulator receiver domain HPY17_17025 PF00486 Transcriptional regulatory protein, C terminal HPY17_17035 PF02233 NAD(P) transhydrogenase beta subunit HPY17_17040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY17_17040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY17_17040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HPY17_17055 PF00990 Diguanylate cyclase, GGDEF domain HPY17_17055 PF17158 Membrane-associated sensor, integral membrane domain HPY17_17075 PF17151 Periplasmic sensor domain HPY17_17075 PF00990 Diguanylate cyclase, GGDEF domain HPY17_17110 PF08274 PhnA Zinc-Ribbon HPY17_17110 PF03831 PhnA domain HPY17_17115 PF13006 Insertion element 4 transposase N-terminal HPY17_17115 PF01609 Transposase DDE domain HPY17_17125 PF03741 Integral membrane protein TerC family HPY17_17130 PF00149 Calcineurin-like phosphoesterase HPY17_17130 PF02872 5'-nucleotidase, C-terminal domain HPY17_17135 PF11398 Protein of unknown function (DUF2813) HPY17_17140 PF06496 Protein of unknown function (DUF1097) HPY17_17145 PF03466 LysR substrate binding domain HPY17_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_17150 PF01226 Formate/nitrite transporter HPY17_17155 PF04264 YceI-like domain HPY17_17160 PF01292 Prokaryotic cytochrome b561 HPY17_17170 PF10388 EAL-domain associated signalling protein domain HPY17_17170 PF00563 EAL domain HPY17_17185 PF02416 mttA/Hcf106 family HPY17_17190 PF00072 Response regulator receiver domain HPY17_17190 PF00486 Transcriptional regulatory protein, C terminal HPY17_17195 PF13493 Domain of unknown function (DUF4118) HPY17_17195 PF00512 His Kinase A (phospho-acceptor) domain HPY17_17195 PF02702 Osmosensitive K+ channel His kinase sensor domain HPY17_17195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_17200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPY17_17200 PF10371 Domain of unknown function HPY17_17200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPY17_17200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPY17_17200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY17_17205 PF02705 K+ potassium transporter HPY17_17210 PF01926 50S ribosome-binding GTPase HPY17_17215 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPY17_17215 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPY17_17220 PF00654 Voltage gated chloride channel HPY17_17230 PF00155 Aminotransferase class I and II HPY17_17235 PF00072 Response regulator receiver domain HPY17_17235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_17240 PF13476 AAA domain HPY17_17245 PF12320 Type 5 capsule protein repressor C-terminal domain HPY17_17245 PF00149 Calcineurin-like phosphoesterase HPY17_17250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY17_17250 PF00356 Bacterial regulatory proteins, lacI family HPY17_17255 PF00381 PTS HPr component phosphorylation site HPY17_17255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY17_17260 PF00294 pfkB family carbohydrate kinase HPY17_17265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY17_17265 PF02378 Phosphotransferase system, EIIC HPY17_17270 PF18030 RimK PreATP-grasp domain HPY17_17270 PF08443 RimK-like ATP-grasp domain HPY17_17275 PF00155 Aminotransferase class I and II HPY17_17285 PF03477 ATP cone domain HPY17_17285 PF13597 Anaerobic ribonucleoside-triphosphate reductase HPY17_17295 PF13419 Haloacid dehalogenase-like hydrolase HPY17_17300 PF12729 Four helix bundle sensory module for signal transduction HPY17_17300 PF00672 HAMP domain HPY17_17300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_17305 PF03606 C4-dicarboxylate anaerobic carrier HPY17_17310 PF03313 Serine dehydratase alpha chain HPY17_17310 PF03315 Serine dehydratase beta chain HPY17_17315 PF00072 Response regulator receiver domain HPY17_17315 PF00196 Bacterial regulatory proteins, luxR family HPY17_17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_17320 PF07730 Histidine kinase HPY17_17320 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HPY17_17320 PF00672 HAMP domain HPY17_17325 PF13187 4Fe-4S dicluster domain HPY17_17325 PF12838 4Fe-4S dicluster domain HPY17_17335 PF01568 Molydopterin dinucleotide binding domain HPY17_17335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY17_17335 PF00384 Molybdopterin oxidoreductase HPY17_17340 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HPY17_17345 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY17_17355 PF01966 HD domain HPY17_17360 PF00072 Response regulator receiver domain HPY17_17360 PF00196 Bacterial regulatory proteins, luxR family HPY17_17365 PF05231 MASE1 HPY17_17365 PF07730 Histidine kinase HPY17_17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_17370 PF07690 Major Facilitator Superfamily HPY17_17380 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_17385 PF00005 ABC transporter HPY17_17385 PF08402 TOBE domain HPY17_17390 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HPY17_17400 PF02803 Thiolase, C-terminal domain HPY17_17400 PF00108 Thiolase, N-terminal domain HPY17_17405 PF00106 short chain dehydrogenase HPY17_17410 PF02355 Protein export membrane protein HPY17_17410 PF07549 SecD/SecF GG Motif HPY17_17415 PF13721 SecD export protein N-terminal TM region HPY17_17415 PF02355 Protein export membrane protein HPY17_17415 PF07549 SecD/SecF GG Motif HPY17_17430 PF00990 Diguanylate cyclase, GGDEF domain HPY17_17430 PF17158 Membrane-associated sensor, integral membrane domain HPY17_17435 PF00483 Nucleotidyl transferase HPY17_17440 PF00704 Glycosyl hydrolases family 18 HPY17_17440 PF06483 Chitinase C HPY17_17445 PF00465 Iron-containing alcohol dehydrogenase HPY17_17455 PF14532 Sigma-54 interaction domain HPY17_17455 PF00072 Response regulator receiver domain HPY17_17455 PF02954 Bacterial regulatory protein, Fis family HPY17_17460 PF02743 Cache domain HPY17_17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_17460 PF00512 His Kinase A (phospho-acceptor) domain HPY17_17470 PF07690 Major Facilitator Superfamily HPY17_17475 PF02887 Pyruvate kinase, alpha/beta domain HPY17_17475 PF00224 Pyruvate kinase, barrel domain HPY17_17480 PF00072 Response regulator receiver domain HPY17_17480 PF01627 Hpt domain HPY17_17480 PF00672 HAMP domain HPY17_17480 PF00512 His Kinase A (phospho-acceptor) domain HPY17_17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_17480 PF17149 Periplasmic sensor domain found in signal transduction proteins HPY17_17485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY17_17490 PF02142 MGS-like domain HPY17_17495 PF00857 Isochorismatase family HPY17_17500 PF01219 Prokaryotic diacylglycerol kinase HPY17_17505 PF12462 DNA helicase IV / RNA helicase N terminal HPY17_17505 PF00580 UvrD/REP helicase N-terminal domain HPY17_17505 PF13361 UvrD-like helicase C-terminal domain HPY17_17510 PF12805 FUSC-like inner membrane protein yccS HPY17_17515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_17515 PF00512 His Kinase A (phospho-acceptor) domain HPY17_17515 PF13188 PAS domain HPY17_17515 PF00072 Response regulator receiver domain HPY17_17515 PF08448 PAS fold HPY17_17540 PF00005 ABC transporter HPY17_17540 PF03459 TOBE domain HPY17_17545 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_17555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY17_17555 PF07685 CobB/CobQ-like glutamine amidotransferase domain HPY17_17595 PF02311 AraC-like ligand binding domain HPY17_17595 PF12833 Helix-turn-helix domain HPY17_17600 PF07715 TonB-dependent Receptor Plug Domain HPY17_17600 PF00593 TonB dependent receptor HPY17_17605 PF07690 Major Facilitator Superfamily HPY17_17610 PF00550 Phosphopantetheine attachment site HPY17_17610 PF08242 Methyltransferase domain HPY17_17610 PF00501 AMP-binding enzyme HPY17_17610 PF00668 Condensation domain HPY17_17615 PF13193 AMP-binding enzyme C-terminal domain HPY17_17615 PF00668 Condensation domain HPY17_17615 PF00501 AMP-binding enzyme HPY17_17615 PF00550 Phosphopantetheine attachment site HPY17_17630 PF00425 chorismate binding enzyme HPY17_17635 PF13193 AMP-binding enzyme C-terminal domain HPY17_17635 PF00501 AMP-binding enzyme HPY17_17640 PF02028 BCCT, betaine/carnitine/choline family transporter HPY17_17645 PF00440 Bacterial regulatory proteins, tetR family HPY17_17645 PF13977 BetI-type transcriptional repressor, C-terminal HPY17_17650 PF00171 Aldehyde dehydrogenase family HPY17_17655 PF05199 GMC oxidoreductase HPY17_17655 PF00732 GMC oxidoreductase HPY17_17660 PF00005 ABC transporter HPY17_17660 PF00664 ABC transporter transmembrane region HPY17_17665 PF00005 ABC transporter HPY17_17665 PF00664 ABC transporter transmembrane region HPY17_17675 PF00512 His Kinase A (phospho-acceptor) domain HPY17_17675 PF09308 LuxQ, periplasmic HPY17_17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_17675 PF00072 Response regulator receiver domain HPY17_17680 PF13407 Periplasmic binding protein domain HPY17_17690 PF01541 GIY-YIG catalytic domain HPY17_17695 PF04337 Protein of unknown function, DUF480 HPY17_17705 PF04363 Protein of unknown function (DUF496) HPY17_17715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPY17_17715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HPY17_17720 PF00230 Major intrinsic protein HPY17_17725 PF01266 FAD dependent oxidoreductase HPY17_17725 PF04324 BFD-like [2Fe-2S] binding domain HPY17_17730 PF00890 FAD binding domain HPY17_17735 PF13183 4Fe-4S dicluster domain HPY17_17735 PF02754 Cysteine-rich domain HPY17_17740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY17_17740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY17_17745 PF00085 Thioredoxin HPY17_17750 PF07690 Major Facilitator Superfamily HPY17_17770 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_17775 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_17780 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_17785 PF00005 ABC transporter HPY17_17795 PF05762 VWA domain containing CoxE-like protein HPY17_17800 PF12592 Protein of unknown function (DUF3763) HPY17_17800 PF17868 AAA lid domain HPY17_17800 PF07728 AAA domain (dynein-related subfamily) HPY17_17805 PF00293 NUDIX domain HPY17_17810 PF01212 Beta-eliminating lyase HPY17_17815 PF00034 Cytochrome c HPY17_17820 PF08361 MAATS-type transcriptional repressor, C-terminal region HPY17_17820 PF00440 Bacterial regulatory proteins, tetR family HPY17_17825 PF00271 Helicase conserved C-terminal domain HPY17_17825 PF00270 DEAD/DEAH box helicase HPY17_17830 PF04336 Acyl carrier protein phosphodiesterase HPY17_17835 PF03222 Tryptophan/tyrosine permease family HPY17_17840 PF00672 HAMP domain HPY17_17840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_17840 PF02743 Cache domain HPY17_17845 PF16363 GDP-mannose 4,6 dehydratase HPY17_17850 PF03746 LamB/YcsF family HPY17_17860 PF02626 Carboxyltransferase domain, subdomain A and B HPY17_17870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY17_17870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY17_17880 PF00005 ABC transporter HPY17_17885 PF13472 GDSL-like Lipase/Acylhydrolase family HPY17_17890 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY17_17890 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY17_17890 PF07055 Enoyl reductase FAD binding domain HPY17_17895 PF00498 FHA domain HPY17_17895 PF00990 Diguanylate cyclase, GGDEF domain HPY17_17895 PF00563 EAL domain HPY17_17905 PF00684 DnaJ central domain HPY17_17905 PF01556 DnaJ C terminal domain HPY17_17905 PF00226 DnaJ domain HPY17_17920 PF13419 Haloacid dehalogenase-like hydrolase HPY17_17935 PF00294 pfkB family carbohydrate kinase HPY17_17940 PF00884 Sulfatase HPY17_17950 PF00271 Helicase conserved C-terminal domain HPY17_17950 PF00270 DEAD/DEAH box helicase HPY17_17950 PF03880 DbpA RNA binding domain HPY17_17955 PF00773 RNB domain HPY17_17955 PF08206 Ribonuclease B OB domain HPY17_17955 PF00575 S1 RNA binding domain HPY17_17965 PF12849 PBP superfamily domain HPY17_17970 PF01575 MaoC like domain HPY17_17975 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HPY17_17980 PF18416 N-acetylglucosamine binding protein domain 2 HPY17_17980 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HPY17_17985 PF03413 Peptidase propeptide and YPEB domain HPY17_17985 PF01447 Thermolysin metallopeptidase, catalytic domain HPY17_17985 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY17_17985 PF04151 Bacterial pre-peptidase C-terminal domain HPY17_17985 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY17_17990 PF04151 Bacterial pre-peptidase C-terminal domain HPY17_17990 PF04389 Peptidase family M28 HPY17_17995 PF00491 Arginase family HPY17_18000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY17_18000 PF17810 Arginine decarboxylase helical bundle domain HPY17_18000 PF17944 Arginine decarboxylase C-terminal helical extension HPY17_18010 PF03448 MgtE intracellular N domain HPY17_18010 PF00571 CBS domain HPY17_18010 PF01769 Divalent cation transporter HPY17_18020 PF00696 Amino acid kinase family HPY17_18020 PF13840 ACT domain HPY17_18030 PF01329 Pterin 4 alpha carbinolamine dehydratase HPY17_18035 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HPY17_18040 PF13193 AMP-binding enzyme C-terminal domain HPY17_18040 PF00501 AMP-binding enzyme HPY17_18060 PF03466 LysR substrate binding domain HPY17_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_18070 PF00892 EamA-like transporter family HPY17_18075 PF00132 Bacterial transferase hexapeptide (six repeats) HPY17_18075 PF14602 Hexapeptide repeat of succinyl-transferase HPY17_18075 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HPY17_18080 PF00571 CBS domain HPY17_18080 PF03471 Transporter associated domain HPY17_18080 PF01595 Cyclin M transmembrane N-terminal domain HPY17_18085 PF02566 OsmC-like protein HPY17_18090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY17_18095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY17_18095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY17_18110 PF13520 Amino acid permease HPY17_18115 PF00990 Diguanylate cyclase, GGDEF domain HPY17_18125 PF00248 Aldo/keto reductase family HPY17_18130 PF00128 Alpha amylase, catalytic domain HPY17_18140 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY17_18145 PF12262 Bacterial virulence factor lipase N-terminal HPY17_18150 PF13426 PAS domain HPY17_18150 PF08447 PAS fold HPY17_18150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_18155 PF01447 Thermolysin metallopeptidase, catalytic domain HPY17_18155 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY17_18155 PF03413 Peptidase propeptide and YPEB domain HPY17_18155 PF04151 Bacterial pre-peptidase C-terminal domain HPY17_18155 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY17_18160 PF03922 OmpW family HPY17_18170 PF00768 D-alanyl-D-alanine carboxypeptidase HPY17_18175 PF08206 Ribonuclease B OB domain HPY17_18175 PF00773 RNB domain HPY17_18175 PF00575 S1 RNA binding domain HPY17_18175 PF17876 Cold shock domain HPY17_18175 PF08461 Ribonuclease R winged-helix domain HPY17_18180 PF00313 'Cold-shock' DNA-binding domain HPY17_18190 PF00291 Pyridoxal-phosphate dependent enzyme HPY17_18195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_18195 PF03466 LysR substrate binding domain HPY17_18205 PF01979 Amidohydrolase family HPY17_18220 PF00672 HAMP domain HPY17_18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_18220 PF00512 His Kinase A (phospho-acceptor) domain HPY17_18220 PF00989 PAS fold HPY17_18225 PF00486 Transcriptional regulatory protein, C terminal HPY17_18225 PF00072 Response regulator receiver domain HPY17_18245 PF00589 Phage integrase family HPY17_18245 PF12167 Arm DNA-binding domain HPY17_18260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_18260 PF03466 LysR substrate binding domain HPY17_18265 PF00107 Zinc-binding dehydrogenase HPY17_18265 PF08240 Alcohol dehydrogenase GroES-like domain HPY17_18270 PF00155 Aminotransferase class I and II HPY17_18275 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY17_18280 PF03466 LysR substrate binding domain HPY17_18280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_18285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY17_18310 PF01966 HD domain HPY17_18320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY17_18325 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HPY17_18325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY17_18350 PF01797 Transposase IS200 like HPY17_18360 PF02595 Glycerate kinase family HPY17_18365 PF02447 GntP family permease HPY17_18370 PF17853 GGDEF-like domain HPY17_18370 PF13556 PucR C-terminal helix-turn-helix domain HPY17_18370 PF05651 Putative sugar diacid recognition HPY17_18375 PF00672 HAMP domain HPY17_18375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_18380 PF01243 Pyridoxamine 5'-phosphate oxidase HPY17_18385 PF06228 Haem utilisation ChuX/HutX HPY17_18390 PF04055 Radical SAM superfamily HPY17_18395 PF03544 Gram-negative bacterial TonB protein C-terminal HPY17_18400 PF01618 MotA/TolQ/ExbB proton channel family HPY17_18405 PF02472 Biopolymer transport protein ExbD/TolR HPY17_18410 PF01497 Periplasmic binding protein HPY17_18415 PF01032 FecCD transport family HPY17_18420 PF00005 ABC transporter HPY17_18460 PF01979 Amidohydrolase family HPY17_18465 PF05958 tRNA (Uracil-5-)-methyltransferase HPY17_18470 PF05661 Protein of unknown function (DUF808) HPY17_18475 PF17151 Periplasmic sensor domain HPY17_18475 PF00990 Diguanylate cyclase, GGDEF domain HPY17_18485 PF00313 'Cold-shock' DNA-binding domain HPY17_18500 PF12833 Helix-turn-helix domain HPY17_18500 PF00072 Response regulator receiver domain HPY17_18510 PF00990 Diguanylate cyclase, GGDEF domain HPY17_18510 PF08448 PAS fold HPY17_18515 PF00455 DeoR C terminal sensor domain HPY17_18515 PF08220 DeoR-like helix-turn-helix domain HPY17_18530 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_18535 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_18535 PF14785 Maltose transport system permease protein MalF P2 domain HPY17_18540 PF01547 Bacterial extracellular solute-binding protein HPY17_18545 PF08402 TOBE domain HPY17_18545 PF00005 ABC transporter HPY17_18550 PF13302 Acetyltransferase (GNAT) domain HPY17_18565 PF01906 Putative heavy-metal-binding HPY17_18570 PF00196 Bacterial regulatory proteins, luxR family HPY17_18580 PF00072 Response regulator receiver domain HPY17_18580 PF01584 CheW-like domain HPY17_18585 PF01047 MarR family HPY17_18590 PF00990 Diguanylate cyclase, GGDEF domain HPY17_18605 PF00563 EAL domain HPY17_18605 PF00990 Diguanylate cyclase, GGDEF domain HPY17_18605 PF03707 Bacterial signalling protein N terminal repeat HPY17_18625 PF03466 LysR substrate binding domain HPY17_18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_18630 PF00563 EAL domain HPY17_18630 PF00990 Diguanylate cyclase, GGDEF domain HPY17_18640 PF02678 Pirin HPY17_18640 PF05726 Pirin C-terminal cupin domain HPY17_18645 PF06865 Pyrimidine/purine nucleoside phosphorylase HPY17_18655 PF07690 Major Facilitator Superfamily HPY17_18660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_18660 PF00672 HAMP domain HPY17_18660 PF12729 Four helix bundle sensory module for signal transduction HPY17_18665 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY17_18665 PF13654 AAA domain HPY17_18675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_18675 PF00005 ABC transporter HPY17_18680 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_18685 PF00672 HAMP domain HPY17_18685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_18685 PF17200 Single Cache domain 2 HPY17_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_18695 PF03466 LysR substrate binding domain HPY17_18705 PF02652 L-lactate permease HPY17_18710 PF01070 FMN-dependent dehydrogenase HPY17_18720 PF03618 Kinase/pyrophosphorylase HPY17_18725 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPY17_18725 PF02896 PEP-utilising enzyme, TIM barrel domain HPY17_18725 PF00391 PEP-utilising enzyme, mobile domain HPY17_18730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_18730 PF08447 PAS fold HPY17_18735 PF01554 MatE HPY17_18750 PF03473 MOSC domain HPY17_18750 PF03475 3-alpha domain HPY17_18755 PF00271 Helicase conserved C-terminal domain HPY17_18755 PF00270 DEAD/DEAH box helicase HPY17_18760 PF03786 D-mannonate dehydratase (UxuA) HPY17_18765 PF07729 FCD domain HPY17_18765 PF00392 Bacterial regulatory proteins, gntR family HPY17_18770 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY17_18775 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY17_18780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY17_18785 PF08125 Mannitol dehydrogenase C-terminal domain HPY17_18785 PF01232 Mannitol dehydrogenase Rossmann domain HPY17_18790 PF02614 Glucuronate isomerase HPY17_18795 PF00294 pfkB family carbohydrate kinase HPY17_18800 PF01081 KDPG and KHG aldolase HPY17_18805 PF10688 Bacterial inner membrane protein HPY17_18810 PF03466 LysR substrate binding domain HPY17_18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_18820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY17_18830 PF00005 ABC transporter HPY17_18830 PF00664 ABC transporter transmembrane region HPY17_18840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY17_18850 PF01810 LysE type translocator HPY17_18855 PF12833 Helix-turn-helix domain HPY17_18870 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY17_18875 PF01047 MarR family HPY17_18880 PF02566 OsmC-like protein HPY17_18885 PF13609 Gram-negative porin HPY17_18890 PF00892 EamA-like transporter family HPY17_18895 PF00462 Glutaredoxin HPY17_18900 PF07670 Nucleoside recognition HPY17_18905 PF07670 Nucleoside recognition HPY17_18910 PF03600 Citrate transporter HPY17_18920 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPY17_18920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY17_18925 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY17_18925 PF06029 AlkA N-terminal domain HPY17_18930 PF07681 DoxX HPY17_18935 PF03466 LysR substrate binding domain HPY17_18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_18955 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY17_18965 PF07148 Maltose operon periplasmic protein precursor (MalM) HPY17_18970 PF02264 LamB porin HPY17_18975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY17_18975 PF00128 Alpha amylase, catalytic domain HPY17_18985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_18985 PF12729 Four helix bundle sensory module for signal transduction HPY17_18985 PF00672 HAMP domain HPY17_18995 PF00672 HAMP domain HPY17_18995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_19000 PF05230 MASE2 domain HPY17_19000 PF00990 Diguanylate cyclase, GGDEF domain HPY17_19010 PF00793 DAHP synthetase I family HPY17_19015 PF00005 ABC transporter HPY17_19020 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_19025 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY17_19030 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_19035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY17_19035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY17_19035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY17_19035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY17_19040 PF02378 Phosphotransferase system, EIIC HPY17_19040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY17_19040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY17_19045 PF01232 Mannitol dehydrogenase Rossmann domain HPY17_19045 PF08125 Mannitol dehydrogenase C-terminal domain HPY17_19050 PF05068 Mannitol repressor HPY17_19055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY17_19085 PF13460 NAD(P)H-binding HPY17_19090 PF03466 LysR substrate binding domain HPY17_19090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_19095 PF00672 HAMP domain HPY17_19095 PF02743 Cache domain HPY17_19095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_19100 PF00106 short chain dehydrogenase HPY17_19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY17_19105 PF03466 LysR substrate binding domain HPY17_19110 PF04013 Putative SAM-dependent RNA methyltransferase HPY17_19115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY17_19125 PF13520 Amino acid permease HPY17_19130 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY17_19130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY17_19130 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY17_19140 PF03472 Autoinducer binding domain HPY17_19140 PF00196 Bacterial regulatory proteins, luxR family HPY17_19170 PF00171 Aldehyde dehydrogenase family HPY17_19175 PF01037 Lrp/AsnC ligand binding domain HPY17_19180 PF02743 Cache domain HPY17_19180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_19180 PF00672 HAMP domain HPY17_19190 PF00474 Sodium:solute symporter family HPY17_19200 PF00171 Aldehyde dehydrogenase family HPY17_19200 PF01619 Proline dehydrogenase HPY17_19200 PF14850 DNA-binding domain of Proline dehydrogenase HPY17_19200 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HPY17_19205 PF12833 Helix-turn-helix domain HPY17_19215 PF03781 Sulfatase-modifying factor enzyme 1 HPY17_19220 PF00196 Bacterial regulatory proteins, luxR family HPY17_19220 PF00072 Response regulator receiver domain HPY17_19225 PF01243 Pyridoxamine 5'-phosphate oxidase HPY17_19225 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HPY17_19230 PF00529 HlyD membrane-fusion protein of T1SS HPY17_19245 PF00664 ABC transporter transmembrane region HPY17_19245 PF00005 ABC transporter HPY17_19245 PF03412 Peptidase C39 family HPY17_19255 PF00072 Response regulator receiver domain HPY17_19255 PF00990 Diguanylate cyclase, GGDEF domain HPY17_19265 PF00672 HAMP domain HPY17_19265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_19265 PF02743 Cache domain HPY17_19270 PF00072 Response regulator receiver domain HPY17_19270 PF01339 CheB methylesterase HPY17_19275 PF03975 CheD chemotactic sensory transduction HPY17_19280 PF01739 CheR methyltransferase, SAM binding domain HPY17_19280 PF03705 CheR methyltransferase, all-alpha domain HPY17_19285 PF02203 Tar ligand binding domain homologue HPY17_19285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY17_19285 PF00672 HAMP domain HPY17_19290 PF01584 CheW-like domain HPY17_19295 PF01584 CheW-like domain HPY17_19300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY17_19300 PF02895 Signal transducing histidine kinase, homodimeric domain HPY17_19300 PF01627 Hpt domain HPY17_19300 PF09078 CheY binding HPY17_19300 PF01584 CheW-like domain HPY17_19305 PF00072 Response regulator receiver domain HPY17_19320 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_19325 PF00528 Binding-protein-dependent transport system inner membrane component HPY17_19325 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY17_19330 PF00005 ABC transporter HPY17_19330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY17_19335 PF05127 Helicase HPY17_19335 PF13718 GNAT acetyltransferase 2 HPY17_19340 PF13416 Bacterial extracellular solute-binding protein HPY17_19420 PF13614 AAA domain HPY17_19450 PF01555 DNA methylase HPY17_19540 PF01850 PIN domain HPY17_19545 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HPY17_19640 PF06986 Type-1V conjugative transfer system mating pair stabilisation HPY17_19690 PF01464 Transglycosylase SLT domain HPY17_19805 PF18340 DNA relaxase TraI 2B/2B-like domain HPY17_19805 PF18272 single-stranded DNA binding TraI N-terminal subdomain HPY17_19805 PF07057 DNA helicase TraI HPY17_19805 PF08751 TrwC relaxase HPY17_19875 PF04002 RadC-like JAB domain HPY17_19930 PF00589 Phage integrase family HPY17_19930 PF02899 Phage integrase, N-terminal SAM-like domain HPY17_19935 PF04381 Putative exonuclease, RdgC HPY17_20030 PF12137 RNA polymerase recycling family C-terminal HPY17_20030 PF00271 Helicase conserved C-terminal domain HPY17_20030 PF18339 RapA N-terminal Tudor like domain 1 HPY17_20030 PF04851 Type III restriction enzyme, res subunit HPY17_20030 PF18337 RapA N-terminal Tudor like domain HPY17_20370 PF18337 RapA N-terminal Tudor like domain HPY17_20370 PF00176 SNF2 family N-terminal domain HPY17_20370 PF12137 RNA polymerase recycling family C-terminal HPY17_20370 PF00271 Helicase conserved C-terminal domain HPY17_20370 PF18339 RapA N-terminal Tudor like domain 1