locus-tag class description HPY13_00005 PF00308 Bacterial dnaA protein HPY13_00005 PF11638 DnaA N-terminal domain HPY13_00005 PF08299 Bacterial dnaA protein helix-turn-helix HPY13_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HPY13_00010 PF02767 DNA polymerase III beta subunit, central domain HPY13_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HPY13_00015 PF02463 RecF/RecN/SMC N terminal domain HPY13_00020 PF01751 Toprim domain HPY13_00020 PF00204 DNA gyrase B HPY13_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HPY13_00020 PF18053 DNA gyrase B subunit insert domain HPY13_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_00030 PF00011 Hsp20/alpha crystallin family HPY13_00035 PF00155 Aminotransferase class I and II HPY13_00040 PF05746 DALR anticodon binding domain HPY13_00040 PF02092 Glycyl-tRNA synthetase beta subunit HPY13_00045 PF02091 Glycyl-tRNA synthetase alpha subunit HPY13_00050 PF01169 Uncharacterized protein family UPF0016 HPY13_00060 PF01206 Sulfurtransferase TusA HPY13_00070 PF08240 Alcohol dehydrogenase GroES-like domain HPY13_00070 PF00107 Zinc-binding dehydrogenase HPY13_00075 PF00291 Pyridoxal-phosphate dependent enzyme HPY13_00075 PF00585 C-terminal regulatory domain of Threonine dehydratase HPY13_00080 PF00920 Dehydratase family HPY13_00085 PF01063 Amino-transferase class IV HPY13_00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY13_00095 PF00205 Thiamine pyrophosphate enzyme, central domain HPY13_00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY13_00100 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPY13_00100 PF01078 Magnesium chelatase, subunit ChlI HPY13_00105 PF01553 Acyltransferase HPY13_00110 PF01323 DSBA-like thioredoxin domain HPY13_00115 PF01636 Phosphotransferase enzyme family HPY13_00120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HPY13_00120 PF13746 4Fe-4S dicluster domain HPY13_00120 PF12801 4Fe-4S binding domain HPY13_00125 PF06288 Protein of unknown function (DUF1040) HPY13_00130 PF07070 SpoOM protein HPY13_00135 PF03006 Haemolysin-III related HPY13_00145 PF02386 Cation transport protein HPY13_00150 PF02080 TrkA-C domain HPY13_00150 PF02254 TrkA-N domain HPY13_00155 PF01189 16S rRNA methyltransferase RsmB/F HPY13_00155 PF01029 NusB family HPY13_00160 PF00551 Formyl transferase HPY13_00160 PF02911 Formyl transferase, C-terminal domain HPY13_00165 PF01327 Polypeptide deformylase HPY13_00170 PF01476 LysM domain HPY13_00175 PF17782 DprA winged helix domain HPY13_00175 PF02481 DNA recombination-mediator protein A HPY13_00180 PF04361 Protein of unknown function (DUF494) HPY13_00185 PF01396 Topoisomerase DNA binding C4 zinc finger HPY13_00190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HPY13_00190 PF02222 ATP-grasp domain HPY13_00195 PF00731 AIR carboxylase HPY13_00200 PF01300 Telomere recombination HPY13_00205 PF01218 Coproporphyrinogen III oxidase HPY13_00210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HPY13_00210 PF08501 Shikimate dehydrogenase substrate binding domain HPY13_00210 PF01488 Shikimate / quinate 5-dehydrogenase HPY13_00220 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_00255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HPY13_00260 PF01964 Radical SAM ThiC family HPY13_00260 PF13667 ThiC-associated domain HPY13_00265 PF02581 Thiamine monophosphate synthase HPY13_00270 PF00899 ThiF family HPY13_00275 PF02597 ThiS family HPY13_00280 PF05690 Thiazole biosynthesis protein ThiG HPY13_00285 PF06968 Biotin and Thiamin Synthesis associated domain HPY13_00285 PF04055 Radical SAM superfamily HPY13_00290 PF01321 Creatinase/Prolidase N-terminal domain HPY13_00290 PF00557 Metallopeptidase family M24 HPY13_00290 PF01321 Creatinase/Prolidase N-terminal domain HPY13_00290 PF00557 Metallopeptidase family M24 HPY13_00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_00295 PF03466 LysR substrate binding domain HPY13_00300 PF07690 Major Facilitator Superfamily HPY13_00310 PF01037 Lrp/AsnC ligand binding domain HPY13_00315 PF00563 EAL domain HPY13_00315 PF00990 Diguanylate cyclase, GGDEF domain HPY13_00315 PF08448 PAS fold HPY13_00320 PF04445 Putative SAM-dependent methyltransferase HPY13_00330 PF00892 EamA-like transporter family HPY13_00335 PF00582 Universal stress protein family HPY13_00340 PF00210 Ferritin-like domain HPY13_00345 PF10625 Universal stress protein B (UspB) HPY13_00360 PF02646 RmuC family HPY13_00365 PF01209 ubiE/COQ5 methyltransferase family HPY13_00370 PF02036 SCP-2 sterol transfer family HPY13_00375 PF03109 ABC1 family HPY13_00380 PF02416 mttA/Hcf106 family HPY13_00385 PF02416 mttA/Hcf106 family HPY13_00390 PF00902 Sec-independent protein translocase protein (TatC) HPY13_00395 PF00034 Cytochrome c HPY13_00395 PF03150 Di-haem cytochrome c peroxidase HPY13_00400 PF01554 MatE HPY13_00410 PF00717 Peptidase S24-like HPY13_00410 PF01726 LexA DNA binding domain HPY13_00415 PF01553 Acyltransferase HPY13_00420 PF01040 UbiA prenyltransferase family HPY13_00425 PF04345 Chorismate lyase HPY13_00430 PF03748 Flagellar basal body-associated protein FliL HPY13_00435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_00435 PF02203 Tar ligand binding domain homologue HPY13_00435 PF00672 HAMP domain HPY13_00440 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HPY13_00440 PF01694 Rhomboid family HPY13_00445 PF00581 Rhodanese-like domain HPY13_00450 PF01026 TatD related DNase HPY13_00455 PF00490 Delta-aminolevulinic acid dehydratase HPY13_00465 PF01612 3'-5' exonuclease HPY13_00465 PF00476 DNA polymerase family A HPY13_00465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY13_00465 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY13_00470 PF01926 50S ribosome-binding GTPase HPY13_00475 PF00034 Cytochrome c HPY13_00485 PF04220 Der GTPase activator (YihI) HPY13_00490 PF10675 Protein of unknown function (DUF2489) HPY13_00495 PF06969 HemN C-terminal domain HPY13_00495 PF04055 Radical SAM superfamily HPY13_00500 PF07219 HemY protein N-terminus HPY13_00505 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HPY13_00510 PF02602 Uroporphyrinogen-III synthase HemD HPY13_00515 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HPY13_00515 PF03900 Porphobilinogen deaminase, C-terminal domain HPY13_00520 PF12633 Adenylate cyclase NT domain HPY13_00520 PF01295 Adenylate cyclase, class-I HPY13_00525 PF01491 Frataxin-like domain HPY13_00535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPY13_00535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY13_00540 PF01678 Diaminopimelate epimerase HPY13_00545 PF04340 Protein of unknown function, DUF484 HPY13_00550 PF02899 Phage integrase, N-terminal SAM-like domain HPY13_00550 PF00589 Phage integrase family HPY13_00555 PF13419 Haloacid dehalogenase-like hydrolase HPY13_00560 PF08495 FIST N domain HPY13_00560 PF00563 EAL domain HPY13_00560 PF10442 FIST C domain HPY13_00560 PF00990 Diguanylate cyclase, GGDEF domain HPY13_00580 PF12146 Serine aminopeptidase, S33 HPY13_00585 PF01810 LysE type translocator HPY13_00590 PF00563 EAL domain HPY13_00590 PF08668 HDOD domain HPY13_00595 PF00210 Ferritin-like domain HPY13_00630 PF00448 SRP54-type protein, GTPase domain HPY13_00630 PF02881 SRP54-type protein, helical bundle domain HPY13_00635 PF00005 ABC transporter HPY13_00640 PF18075 FtsX extracellular domain HPY13_00645 PF04545 Sigma-70, region 4 HPY13_00645 PF04542 Sigma-70 region 2 HPY13_00645 PF00140 Sigma-70 factor, region 1.2 HPY13_00650 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_00650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY13_00655 PF00440 Bacterial regulatory proteins, tetR family HPY13_00665 PF05958 tRNA (Uracil-5-)-methyltransferase HPY13_00670 PF07715 TonB-dependent Receptor Plug Domain HPY13_00670 PF00593 TonB dependent receptor HPY13_00675 PF05922 Peptidase inhibitor I9 HPY13_00675 PF04151 Bacterial pre-peptidase C-terminal domain HPY13_00675 PF00082 Subtilase family HPY13_00680 PF01177 Asp/Glu/Hydantoin racemase HPY13_00745 PF00962 Adenosine/AMP deaminase HPY13_00755 PF02954 Bacterial regulatory protein, Fis family HPY13_00755 PF00072 Response regulator receiver domain HPY13_00755 PF00158 Sigma-54 interaction domain HPY13_00760 PF00989 PAS fold HPY13_00760 PF00512 His Kinase A (phospho-acceptor) domain HPY13_00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_00770 PF00120 Glutamine synthetase, catalytic domain HPY13_00770 PF03951 Glutamine synthetase, beta-Grasp domain HPY13_00790 PF03631 Virulence factor BrkB HPY13_00795 PF02580 D-Tyr-tRNA(Tyr) deacylase HPY13_00800 PF00583 Acetyltransferase (GNAT) family HPY13_00800 PF09500 Putative thioesterase (yiiD_Cterm) HPY13_00810 PF01293 Phosphoenolpyruvate carboxykinase HPY13_00815 PF01430 Hsp33 protein HPY13_00820 PF01479 S4 domain HPY13_00825 PF11356 Type II secretion system protein C HPY13_00830 PF03958 Bacterial type II/III secretion system short domain HPY13_00830 PF00263 Bacterial type II and III secretion system protein HPY13_00835 PF00437 Type II/IV secretion system protein HPY13_00840 PF00482 Type II secretion system (T2SS), protein F HPY13_00845 PF07963 Prokaryotic N-terminal methylation motif HPY13_00845 PF08334 Type II secretion system (T2SS), protein G HPY13_00850 PF12019 Type II transport protein GspH HPY13_00855 PF07963 Prokaryotic N-terminal methylation motif HPY13_00855 PF02501 Type II secretion system (T2SS), protein I HPY13_00860 PF11612 Type II secretion system (T2SS), protein J HPY13_00860 PF07963 Prokaryotic N-terminal methylation motif HPY13_00865 PF03934 Type II secretion system (T2SS), protein K HPY13_00870 PF05134 Type II secretion system (T2SS), protein L HPY13_00870 PF12693 GspL periplasmic domain HPY13_00875 PF04612 Type II secretion system (T2SS), protein M HPY13_00880 PF01203 Type II secretion system (T2SS), protein N HPY13_00885 PF00459 Inositol monophosphatase family HPY13_00890 PF00293 NUDIX domain HPY13_00895 PF01106 NifU-like domain HPY13_00895 PF01521 Iron-sulphur cluster biosynthesis HPY13_00900 PF00156 Phosphoribosyl transferase domain HPY13_00910 PF00561 alpha/beta hydrolase fold HPY13_00920 PF16921 Tex protein YqgF-like domain HPY13_00920 PF17674 HHH domain HPY13_00920 PF09371 Tex-like protein N-terminal domain HPY13_00920 PF00575 S1 RNA binding domain HPY13_00925 PF03449 Transcription elongation factor, N-terminal HPY13_00925 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY13_00930 PF00486 Transcriptional regulatory protein, C terminal HPY13_00930 PF00072 Response regulator receiver domain HPY13_00935 PF00672 HAMP domain HPY13_00935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_00935 PF00512 His Kinase A (phospho-acceptor) domain HPY13_00940 PF00860 Permease family HPY13_00945 PF00270 DEAD/DEAH box helicase HPY13_00945 PF00271 Helicase conserved C-terminal domain HPY13_00945 PF17191 RecG wedge domain HPY13_00950 PF02824 TGS domain HPY13_00950 PF13291 ACT domain HPY13_00950 PF04607 Region found in RelA / SpoT proteins HPY13_00955 PF01192 RNA polymerase Rpb6 HPY13_00960 PF00625 Guanylate kinase HPY13_00965 PF02592 Putative vitamin uptake transporter HPY13_00970 PF00474 Sodium:solute symporter family HPY13_00980 PF02080 TrkA-C domain HPY13_00980 PF03471 Transporter associated domain HPY13_00980 PF00999 Sodium/hydrogen exchanger family HPY13_00985 PF00072 Response regulator receiver domain HPY13_00985 PF00196 Bacterial regulatory proteins, luxR family HPY13_00990 PF02683 Cytochrome C biogenesis protein transmembrane region HPY13_00990 PF11412 Disulphide bond corrector protein DsbC HPY13_00995 PF17967 Pullulanase N2 domain HPY13_00995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY13_00995 PF03714 Bacterial pullanase-associated domain HPY13_00995 PF18494 Pullulanase Ins domain HPY13_00995 PF11852 Domain of unknown function (DUF3372) HPY13_01000 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY13_01005 PF00206 Lyase HPY13_01005 PF10415 Fumarase C C-terminus HPY13_01010 PF00990 Diguanylate cyclase, GGDEF domain HPY13_01010 PF17158 Membrane-associated sensor, integral membrane domain HPY13_01015 PF04186 FxsA cytoplasmic membrane protein HPY13_01020 PF00588 SpoU rRNA Methylase family HPY13_01025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY13_01025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY13_01030 PF16527 Two-component sensor protein CpxA, periplasmic domain HPY13_01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_01030 PF00512 His Kinase A (phospho-acceptor) domain HPY13_01030 PF00672 HAMP domain HPY13_01035 PF00072 Response regulator receiver domain HPY13_01035 PF00486 Transcriptional regulatory protein, C terminal HPY13_01045 PF01545 Cation efflux family HPY13_01045 PF16916 Dimerisation domain of Zinc Transporter HPY13_01050 PF00365 Phosphofructokinase HPY13_01055 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HPY13_01060 PF06005 Cell division protein ZapB HPY13_01065 PF02219 Methylenetetrahydrofolate reductase HPY13_01070 PF00742 Homoserine dehydrogenase HPY13_01070 PF00696 Amino acid kinase family HPY13_01070 PF03447 Homoserine dehydrogenase, NAD binding domain HPY13_01075 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY13_01080 PF01340 Met Apo-repressor, MetJ HPY13_01085 PF03949 Malic enzyme, NAD binding domain HPY13_01085 PF00390 Malic enzyme, N-terminal domain HPY13_01090 PF01197 Ribosomal protein L31 HPY13_01095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPY13_01095 PF17764 3′ DNA-binding domain (3′BD) HPY13_01095 PF18074 Primosomal protein N C-terminal domain HPY13_01095 PF00270 DEAD/DEAH box helicase HPY13_01095 PF00271 Helicase conserved C-terminal domain HPY13_01100 PF00356 Bacterial regulatory proteins, lacI family HPY13_01105 PF05036 Sporulation related domain HPY13_01110 PF00227 Proteasome subunit HPY13_01115 PF10431 C-terminal, D2-small domain, of ClpB protein HPY13_01115 PF07724 AAA domain (Cdc48 subfamily) HPY13_01115 PF00004 ATPase family associated with various cellular activities (AAA) HPY13_01120 PF01040 UbiA prenyltransferase family HPY13_01125 PF03737 Aldolase/RraA HPY13_01130 PF01554 MatE HPY13_01135 PF00121 Triosephosphate isomerase HPY13_01155 PF00455 DeoR C terminal sensor domain HPY13_01155 PF08220 DeoR-like helix-turn-helix domain HPY13_01160 PF00166 Chaperonin 10 Kd subunit HPY13_01165 PF00118 TCP-1/cpn60 chaperonin family HPY13_01175 PF04055 Radical SAM superfamily HPY13_01180 PF01132 Elongation factor P (EF-P) OB domain HPY13_01180 PF08207 Elongation factor P (EF-P) KOW-like domain HPY13_01180 PF09285 Elongation factor P, C-terminal HPY13_01185 PF02313 Fumarate reductase subunit D HPY13_01190 PF02300 Fumarate reductase subunit C HPY13_01195 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY13_01195 PF13183 4Fe-4S dicluster domain HPY13_01200 PF02910 Fumarate reductase flavoprotein C-term HPY13_01200 PF00890 FAD binding domain HPY13_01205 PF00152 tRNA synthetases class II (D, K and N) HPY13_01210 PF00581 Rhodanese-like domain HPY13_01215 PF02556 Preprotein translocase subunit SecB HPY13_01220 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPY13_01220 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPY13_01225 PF06426 Serine acetyltransferase, N-terminal HPY13_01225 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_01235 PF00311 Phosphoenolpyruvate carboxylase HPY13_01240 PF01546 Peptidase family M20/M25/M40 HPY13_01240 PF07687 Peptidase dimerisation domain HPY13_01245 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY13_01245 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY13_01250 PF00696 Amino acid kinase family HPY13_01255 PF00764 Arginosuccinate synthase HPY13_01260 PF00206 Lyase HPY13_01260 PF14698 Argininosuccinate lyase C-terminal HPY13_01270 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_01270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY13_01275 PF00462 Glutaredoxin HPY13_01275 PF08534 Redoxin HPY13_01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_01280 PF03466 LysR substrate binding domain HPY13_01285 PF17092 Penicillin-binding protein OB-like domain HPY13_01285 PF00912 Transglycosylase HPY13_01285 PF00905 Penicillin binding protein transpeptidase domain HPY13_01310 PF11741 AMIN domain HPY13_01310 PF07660 Secretin and TonB N terminus short domain HPY13_01310 PF00263 Bacterial type II and III secretion system protein HPY13_01310 PF03958 Bacterial type II/III secretion system short domain HPY13_01315 PF01202 Shikimate kinase HPY13_01320 PF01761 3-dehydroquinate synthase HPY13_01330 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPY13_01335 PF00834 Ribulose-phosphate 3 epimerase family HPY13_01340 PF13419 Haloacid dehalogenase-like hydrolase HPY13_01345 PF00579 tRNA synthetases class I (W and Y) HPY13_01360 PF00919 Uncharacterized protein family UPF0004 HPY13_01360 PF18693 TRAM domain HPY13_01360 PF04055 Radical SAM superfamily HPY13_01365 PF00117 Glutamine amidotransferase class-I HPY13_01370 PF00202 Aminotransferase class-III HPY13_01375 PF04958 Arginine N-succinyltransferase beta subunit HPY13_01380 PF00171 Aldehyde dehydrogenase family HPY13_01390 PF00027 Cyclic nucleotide-binding domain HPY13_01390 PF13545 Crp-like helix-turn-helix domain HPY13_01395 PF00485 Phosphoribulokinase / Uridine kinase family HPY13_01400 PF06794 Uncharacterised protein family (UPF0270) HPY13_01405 PF00561 alpha/beta hydrolase fold HPY13_01415 PF12848 ABC transporter HPY13_01415 PF00005 ABC transporter HPY13_01420 PF02525 Flavodoxin-like fold HPY13_01425 PF00999 Sodium/hydrogen exchanger family HPY13_01425 PF02254 TrkA-N domain HPY13_01435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY13_01440 PF01112 Asparaginase HPY13_01445 PF00709 Adenylosuccinate synthetase HPY13_01450 PF08238 Sel1 repeat HPY13_01455 PF00884 Sulfatase HPY13_01455 PF11893 Domain of unknown function (DUF3413) HPY13_01460 PF00575 S1 RNA binding domain HPY13_01460 PF08461 Ribonuclease R winged-helix domain HPY13_01460 PF17876 Cold shock domain HPY13_01460 PF00773 RNB domain HPY13_01460 PF08206 Ribonuclease B OB domain HPY13_01465 PF00588 SpoU rRNA Methylase family HPY13_01465 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY13_01470 PF00338 Ribosomal protein S10p/S20e HPY13_01475 PF00297 Ribosomal protein L3 HPY13_01480 PF00573 Ribosomal protein L4/L1 family HPY13_01485 PF00276 Ribosomal protein L23 HPY13_01490 PF03947 Ribosomal Proteins L2, C-terminal domain HPY13_01490 PF00181 Ribosomal Proteins L2, RNA binding domain HPY13_01495 PF00203 Ribosomal protein S19 HPY13_01500 PF00237 Ribosomal protein L22p/L17e HPY13_01505 PF07650 KH domain HPY13_01505 PF00189 Ribosomal protein S3, C-terminal domain HPY13_01510 PF00252 Ribosomal protein L16p/L10e HPY13_01515 PF00831 Ribosomal L29 protein HPY13_01520 PF00366 Ribosomal protein S17 HPY13_01525 PF00238 Ribosomal protein L14p/L23e HPY13_01530 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPY13_01530 PF00467 KOW motif HPY13_01535 PF00281 Ribosomal protein L5 HPY13_01535 PF00673 ribosomal L5P family C-terminus HPY13_01540 PF00253 Ribosomal protein S14p/S29e HPY13_01545 PF00410 Ribosomal protein S8 HPY13_01550 PF00347 Ribosomal protein L6 HPY13_01555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPY13_01560 PF00333 Ribosomal protein S5, N-terminal domain HPY13_01560 PF03719 Ribosomal protein S5, C-terminal domain HPY13_01565 PF00327 Ribosomal protein L30p/L7e HPY13_01570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPY13_01575 PF00344 SecY translocase HPY13_01580 PF00444 Ribosomal protein L36 HPY13_01585 PF00416 Ribosomal protein S13/S18 HPY13_01590 PF00411 Ribosomal protein S11 HPY13_01595 PF00163 Ribosomal protein S4/S9 N-terminal domain HPY13_01595 PF01479 S4 domain HPY13_01600 PF01000 RNA polymerase Rpb3/RpoA insert domain HPY13_01600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPY13_01600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPY13_01605 PF01196 Ribosomal protein L17 HPY13_01615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY13_01615 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY13_01620 PF08525 Opacity-associated protein A N-terminal motif HPY13_01620 PF04225 Opacity-associated protein A LysM-like domain HPY13_01625 PF00892 EamA-like transporter family HPY13_01630 PF13673 Acetyltransferase (GNAT) domain HPY13_01635 PF03880 DbpA RNA binding domain HPY13_01635 PF00271 Helicase conserved C-terminal domain HPY13_01635 PF00270 DEAD/DEAH box helicase HPY13_01645 PF00149 Calcineurin-like phosphoesterase HPY13_01645 PF02872 5'-nucleotidase, C-terminal domain HPY13_01650 PF10414 Sirohaem synthase dimerisation region HPY13_01650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY13_01650 PF14824 Sirohaem biosynthesis protein central HPY13_01655 PF01507 Phosphoadenosine phosphosulfate reductase family HPY13_01660 PF00009 Elongation factor Tu GTP binding domain HPY13_01685 PF00005 ABC transporter HPY13_01695 PF10795 Protein of unknown function (DUF2607) HPY13_01700 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HPY13_01705 PF01625 Peptide methionine sulfoxide reductase HPY13_01710 PF17243 POTRA domain TamA domain 1 HPY13_01710 PF01103 Surface antigen HPY13_01710 PF07244 Surface antigen variable number repeat HPY13_01715 PF04357 TamB, inner membrane protein subunit of TAM complex HPY13_01720 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HPY13_01725 PF00719 Inorganic pyrophosphatase HPY13_01730 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HPY13_01735 PF02875 Mur ligase family, glutamate ligase domain HPY13_01735 PF08245 Mur ligase middle domain HPY13_01735 PF01225 Mur ligase family, catalytic domain HPY13_01740 PF02441 Flavoprotein HPY13_01750 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_01755 PF00005 ABC transporter HPY13_01760 PF04751 Protein of unknown function (DUF615) HPY13_01765 PF01523 Putative modulator of DNA gyrase HPY13_01770 PF00571 CBS domain HPY13_01770 PF03448 MgtE intracellular N domain HPY13_01770 PF01769 Divalent cation transporter HPY13_01775 PF00381 PTS HPr component phosphorylation site HPY13_01780 PF03668 P-loop ATPase protein family HPY13_01785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY13_01790 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY13_01795 PF04552 Sigma-54, DNA binding domain HPY13_01795 PF04963 Sigma-54 factor, core binding domain HPY13_01795 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPY13_01800 PF00005 ABC transporter HPY13_01800 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPY13_01805 PF03968 OstA-like protein HPY13_01820 PF00571 CBS domain HPY13_01820 PF01380 SIS domain HPY13_01825 PF01699 Sodium/calcium exchanger protein HPY13_01830 PF00005 ABC transporter HPY13_01835 PF02405 Permease MlaE HPY13_01840 PF02470 MlaD protein HPY13_01845 PF05494 MlaC protein HPY13_01855 PF01722 BolA-like protein HPY13_01860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY13_01865 PF01553 Acyltransferase HPY13_01870 PF01042 Endoribonuclease L-PSP HPY13_01875 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HPY13_01875 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HPY13_01880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY13_01880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY13_01885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY13_01885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY13_01890 PF13638 PIN domain HPY13_01890 PF02562 PhoH-like protein HPY13_01895 PF18337 RapA N-terminal Tudor like domain HPY13_01895 PF00271 Helicase conserved C-terminal domain HPY13_01895 PF12137 RNA polymerase recycling family C-terminal HPY13_01895 PF00176 SNF2 family N-terminal domain HPY13_01895 PF18339 RapA N-terminal Tudor like domain 1 HPY13_01900 PF00849 RNA pseudouridylate synthase HPY13_01905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY13_01905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY13_01910 PF08264 Anticodon-binding domain of tRNA HPY13_01910 PF00133 tRNA synthetases class I (I, L, M and V) HPY13_01910 PF10458 Valyl tRNA synthetase tRNA binding arm HPY13_01915 PF04364 DNA polymerase III chi subunit, HolC HPY13_01920 PF02789 Cytosol aminopeptidase family, N-terminal domain HPY13_01920 PF00883 Cytosol aminopeptidase family, catalytic domain HPY13_01925 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY13_01930 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY13_01945 PF00072 Response regulator receiver domain HPY13_01990 PF00694 Aconitase C-terminal domain HPY13_01995 PF00330 Aconitase family (aconitate hydratase) HPY13_02000 PF00180 Isocitrate/isopropylmalate dehydrogenase HPY13_02005 PF08502 LeuA allosteric (dimerisation) domain HPY13_02005 PF00682 HMGL-like HPY13_02015 PF01569 PAP2 superfamily HPY13_02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_02025 PF03466 LysR substrate binding domain HPY13_02030 PF00501 AMP-binding enzyme HPY13_02035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY13_02035 PF00205 Thiamine pyrophosphate enzyme, central domain HPY13_02035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY13_02040 PF10369 Small subunit of acetolactate synthase HPY13_02045 PF01797 Transposase IS200 like HPY13_02050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY13_02050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY13_02050 PF01842 ACT domain HPY13_02055 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HPY13_02060 PF01812 5-formyltetrahydrofolate cyclo-ligase family HPY13_02070 PF05164 Cell division protein ZapA HPY13_02075 PF03695 Uncharacterised protein family (UPF0149) HPY13_02080 PF01494 FAD binding domain HPY13_02085 PF01494 FAD binding domain HPY13_02100 PF03937 Flavinator of succinate dehydrogenase HPY13_02110 PF00890 FAD binding domain HPY13_02110 PF02910 Fumarate reductase flavoprotein C-term HPY13_02115 PF08281 Sigma-70, region 4 HPY13_02115 PF04542 Sigma-70 region 2 HPY13_02120 PF03872 Anti sigma-E protein RseA, N-terminal domain HPY13_02120 PF03873 Anti sigma-E protein RseA, C-terminal domain HPY13_02125 PF17188 MucB/RseB C-terminal domain HPY13_02125 PF03888 MucB/RseB N-terminal domain HPY13_02135 PF03144 Elongation factor Tu domain 2 HPY13_02135 PF06421 GTP-binding protein LepA C-terminus HPY13_02135 PF00679 Elongation factor G C-terminus HPY13_02135 PF00009 Elongation factor Tu GTP binding domain HPY13_02140 PF10502 Signal peptidase, peptidase S26 HPY13_02145 PF14622 Ribonuclease-III-like HPY13_02145 PF00035 Double-stranded RNA binding motif HPY13_02150 PF07650 KH domain HPY13_02150 PF01926 50S ribosome-binding GTPase HPY13_02155 PF11967 Recombination protein O N terminal HPY13_02155 PF02565 Recombination protein O C terminal HPY13_02160 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HPY13_02165 PF01648 4'-phosphopantetheinyl transferase superfamily HPY13_02180 PF00990 Diguanylate cyclase, GGDEF domain HPY13_02185 PF00072 Response regulator receiver domain HPY13_02185 PF00672 HAMP domain HPY13_02185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY13_02185 PF01627 Hpt domain HPY13_02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_02185 PF00512 His Kinase A (phospho-acceptor) domain HPY13_02190 PF05958 tRNA (Uracil-5-)-methyltransferase HPY13_02190 PF01938 TRAM domain HPY13_02195 PF02824 TGS domain HPY13_02195 PF13291 ACT domain HPY13_02195 PF04607 Region found in RelA / SpoT proteins HPY13_02200 PF03819 MazG nucleotide pyrophosphohydrolase domain HPY13_02205 PF06418 CTP synthase N-terminus HPY13_02205 PF00117 Glutamine amidotransferase class-I HPY13_02210 PF00113 Enolase, C-terminal TIM barrel domain HPY13_02210 PF03952 Enolase, N-terminal domain HPY13_02215 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY13_02215 PF01743 Poly A polymerase head domain HPY13_02215 PF01966 HD domain HPY13_02220 PF01471 Putative peptidoglycan binding domain HPY13_02220 PF13401 AAA domain HPY13_02230 PF08239 Bacterial SH3 domain HPY13_02235 PF01384 Phosphate transporter family HPY13_02240 PF01865 Protein of unknown function DUF47 HPY13_02245 PF01928 CYTH domain HPY13_02255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_02255 PF00672 HAMP domain HPY13_02255 PF02743 Cache domain HPY13_02260 PF03710 Glutamate-ammonia ligase adenylyltransferase HPY13_02260 PF08335 GlnD PII-uridylyltransferase HPY13_02265 PF00294 pfkB family carbohydrate kinase HPY13_02265 PF01467 Cytidylyltransferase-like HPY13_02270 PF02321 Outer membrane efflux protein HPY13_02275 PF00293 NUDIX domain HPY13_02280 PF06853 Protein of unknown function (DUF1249) HPY13_02285 PF00149 Calcineurin-like phosphoesterase HPY13_02290 PF05728 Uncharacterised protein family (UPF0227) HPY13_02295 PF00986 DNA gyrase B subunit, carboxyl terminus HPY13_02295 PF01751 Toprim domain HPY13_02295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_02295 PF00204 DNA gyrase B HPY13_02300 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY13_02300 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY13_02305 PF03884 DNA gyrase inhibitor YacG HPY13_02310 PF07072 Cell division protein HPY13_02315 PF01121 Dephospho-CoA kinase HPY13_02320 PF06750 Bacterial Peptidase A24 N-terminal domain HPY13_02320 PF01478 Type IV leader peptidase family HPY13_02325 PF00482 Type II secretion system (T2SS), protein F HPY13_02330 PF00437 Type II/IV secretion system protein HPY13_02330 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HPY13_02340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HPY13_02340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HPY13_02345 PF01510 N-acetylmuramoyl-L-alanine amidase HPY13_02350 PF00258 Flavodoxin HPY13_02355 PF02899 Phage integrase, N-terminal SAM-like domain HPY13_02355 PF00589 Phage integrase family HPY13_02360 PF13098 Thioredoxin-like domain HPY13_02360 PF10411 Disulfide bond isomerase protein N-terminus HPY13_02365 PF17768 RecJ OB domain HPY13_02365 PF01368 DHH family HPY13_02365 PF02272 DHHA1 domain HPY13_02370 PF00392 Bacterial regulatory proteins, gntR family HPY13_02370 PF07729 FCD domain HPY13_02375 PF00456 Transketolase, thiamine diphosphate binding domain HPY13_02375 PF17831 Pyruvate dehydrogenase E1 component middle domain HPY13_02380 PF02817 e3 binding domain HPY13_02380 PF00364 Biotin-requiring enzyme HPY13_02380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY13_02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_02385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY13_02395 PF01795 MraW methylase family HPY13_02400 PF04999 Cell division protein FtsL HPY13_02405 PF03717 Penicillin-binding Protein dimerisation domain HPY13_02405 PF00905 Penicillin binding protein transpeptidase domain HPY13_02410 PF01225 Mur ligase family, catalytic domain HPY13_02410 PF02875 Mur ligase family, glutamate ligase domain HPY13_02410 PF08245 Mur ligase middle domain HPY13_02415 PF02875 Mur ligase family, glutamate ligase domain HPY13_02415 PF08245 Mur ligase middle domain HPY13_02415 PF01225 Mur ligase family, catalytic domain HPY13_02420 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HPY13_02420 PF00953 Glycosyl transferase family 4 HPY13_02425 PF08245 Mur ligase middle domain HPY13_02425 PF02875 Mur ligase family, glutamate ligase domain HPY13_02430 PF01098 Cell cycle protein HPY13_02435 PF03033 Glycosyltransferase family 28 N-terminal domain HPY13_02435 PF04101 Glycosyltransferase family 28 C-terminal domain HPY13_02440 PF08245 Mur ligase middle domain HPY13_02440 PF02875 Mur ligase family, glutamate ligase domain HPY13_02440 PF01225 Mur ligase family, catalytic domain HPY13_02445 PF03799 Cell division protein FtsQ HPY13_02445 PF08478 POTRA domain, FtsQ-type HPY13_02450 PF02491 SHS2 domain inserted in FTSA HPY13_02455 PF00091 Tubulin/FtsZ family, GTPase domain HPY13_02455 PF12327 FtsZ family, C-terminal domain HPY13_02460 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HPY13_02470 PF02810 SEC-C motif HPY13_02470 PF01043 SecA preprotein cross-linking domain HPY13_02470 PF07517 SecA DEAD-like domain HPY13_02470 PF07516 SecA Wing and Scaffold domain HPY13_02475 PF00293 NUDIX domain HPY13_02480 PF01113 Dihydrodipicolinate reductase, N-terminus HPY13_02480 PF05173 Dihydrodipicolinate reductase, C-terminus HPY13_02490 PF00117 Glutamine amidotransferase class-I HPY13_02490 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HPY13_02495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY13_02495 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HPY13_02495 PF02142 MGS-like domain HPY13_02515 PF01925 Sulfite exporter TauE/SafE HPY13_02520 PF03466 LysR substrate binding domain HPY13_02520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_02525 PF03458 UPF0126 domain HPY13_02530 PF01497 Periplasmic binding protein HPY13_02540 PF01048 Phosphorylase superfamily HPY13_02550 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_02550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY13_02555 PF04898 Glutamate synthase central domain HPY13_02555 PF00310 Glutamine amidotransferases class-II HPY13_02555 PF01493 GXGXG motif HPY13_02555 PF01645 Conserved region in glutamate synthase HPY13_02560 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_02560 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY13_02565 PF00310 Glutamine amidotransferases class-II HPY13_02565 PF01645 Conserved region in glutamate synthase HPY13_02565 PF04898 Glutamate synthase central domain HPY13_02565 PF01493 GXGXG motif HPY13_02570 PF16199 Radical_SAM C-terminal domain HPY13_02570 PF04055 Radical SAM superfamily HPY13_02575 PF00360 Phytochrome region HPY13_02575 PF00563 EAL domain HPY13_02575 PF00990 Diguanylate cyclase, GGDEF domain HPY13_02575 PF01590 GAF domain HPY13_02580 PF00072 Response regulator receiver domain HPY13_02580 PF00989 PAS fold HPY13_02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_02580 PF18415 Histidine kinase receptor ArcB trans-membrane domain HPY13_02580 PF00512 His Kinase A (phospho-acceptor) domain HPY13_02580 PF01627 Hpt domain HPY13_02585 PF00072 Response regulator receiver domain HPY13_02585 PF00486 Transcriptional regulatory protein, C terminal HPY13_02595 PF03737 Aldolase/RraA HPY13_02610 PF00742 Homoserine dehydrogenase HPY13_02610 PF01842 ACT domain HPY13_02610 PF00696 Amino acid kinase family HPY13_02610 PF03447 Homoserine dehydrogenase, NAD binding domain HPY13_02610 PF13840 ACT domain HPY13_02615 PF08544 GHMP kinases C terminal HPY13_02615 PF00288 GHMP kinases N terminal domain HPY13_02620 PF00291 Pyridoxal-phosphate dependent enzyme HPY13_02620 PF14821 Threonine synthase N terminus HPY13_02625 PF01228 Glycine radical HPY13_02630 PF01261 Xylose isomerase-like TIM barrel HPY13_02635 PF03167 Uracil DNA glycosylase superfamily HPY13_02650 PF01235 Sodium:alanine symporter family HPY13_02655 PF03883 Peroxide stress protein YaaA HPY13_02665 PF01026 TatD related DNase HPY13_02670 PF07670 Nucleoside recognition HPY13_02670 PF07662 Na+ dependent nucleoside transporter C-terminus HPY13_02670 PF01773 Na+ dependent nucleoside transporter N-terminus HPY13_02680 PF01791 DeoC/LacD family aldolase HPY13_02685 PF00591 Glycosyl transferase family, a/b domain HPY13_02685 PF02885 Glycosyl transferase family, helical bundle domain HPY13_02685 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HPY13_02690 PF01676 Metalloenzyme superfamily HPY13_02695 PF01048 Phosphorylase superfamily HPY13_02705 PF18429 Domain of unknown function (DUF5609) HPY13_02715 PF18073 Rubredoxin metal binding domain HPY13_02720 PF00679 Elongation factor G C-terminus HPY13_02720 PF14492 Elongation Factor G, domain II HPY13_02720 PF03764 Elongation factor G, domain IV HPY13_02720 PF00009 Elongation factor Tu GTP binding domain HPY13_02720 PF03144 Elongation factor Tu domain 2 HPY13_02725 PF00501 AMP-binding enzyme HPY13_02730 PF00072 Response regulator receiver domain HPY13_02740 PF00703 Glycosyl hydrolases family 2 HPY13_02740 PF16353 Domain of unknown function(DUF4981) HPY13_02740 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HPY13_02740 PF02929 Beta galactosidase small chain HPY13_02740 PF02837 Glycosyl hydrolases family 2, sugar binding domain HPY13_02745 PF00356 Bacterial regulatory proteins, lacI family HPY13_02750 PF01588 Putative tRNA binding domain HPY13_02760 PF01544 CorA-like Mg2+ transporter protein HPY13_02765 PF18030 RimK PreATP-grasp domain HPY13_02765 PF02080 TrkA-C domain HPY13_02765 PF08443 RimK-like ATP-grasp domain HPY13_02770 PF00583 Acetyltransferase (GNAT) family HPY13_02780 PF14602 Hexapeptide repeat of succinyl-transferase HPY13_02780 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HPY13_02785 PF07130 YebG protein HPY13_02800 PF17946 RecC C-terminal domain HPY13_02805 PF00580 UvrD/REP helicase N-terminal domain HPY13_02805 PF12705 PD-(D/E)XK nuclease superfamily HPY13_02805 PF13361 UvrD-like helicase C-terminal domain HPY13_02810 PF13538 UvrD-like helicase C-terminal domain HPY13_02820 PF00696 Amino acid kinase family HPY13_02820 PF00583 Acetyltransferase (GNAT) family HPY13_02830 PF06725 3D domain HPY13_02830 PF03562 MltA specific insert domain HPY13_02835 PF00899 ThiF family HPY13_02840 PF02657 Fe-S metabolism associated domain HPY13_02845 PF00266 Aminotransferase class-V HPY13_02850 PF01965 DJ-1/PfpI family HPY13_02855 PF08546 Ketopantoate reductase PanE/ApbA C terminal HPY13_02855 PF02558 Ketopantoate reductase PanE/ApbA HPY13_02860 PF03502 Nucleoside-specific channel-forming protein, Tsx HPY13_02870 PF04542 Sigma-70 region 2 HPY13_02870 PF04545 Sigma-70, region 4 HPY13_02880 PF07690 Major Facilitator Superfamily HPY13_02885 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY13_02895 PF05175 Methyltransferase small domain HPY13_02900 PF01722 BolA-like protein HPY13_02905 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HPY13_02905 PF11973 NQRA C-terminal domain HPY13_02910 PF03116 NQR2, RnfD, RnfE family HPY13_02915 PF04205 FMN-binding domain HPY13_02920 PF02508 Rnf-Nqr subunit, membrane protein HPY13_02925 PF02508 Rnf-Nqr subunit, membrane protein HPY13_02930 PF00175 Oxidoreductase NAD-binding domain HPY13_02930 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY13_02930 PF00970 Oxidoreductase FAD-binding domain HPY13_02935 PF02424 ApbE family HPY13_02945 PF00817 impB/mucB/samB family HPY13_02945 PF11798 IMS family HHH motif HPY13_02955 PF00990 Diguanylate cyclase, GGDEF domain HPY13_02955 PF17158 Membrane-associated sensor, integral membrane domain HPY13_02960 PF00209 Sodium:neurotransmitter symporter family HPY13_02970 PF08443 RimK-like ATP-grasp domain HPY13_02970 PF18030 RimK PreATP-grasp domain HPY13_02975 PF18030 RimK PreATP-grasp domain HPY13_02975 PF08443 RimK-like ATP-grasp domain HPY13_02980 PF07687 Peptidase dimerisation domain HPY13_02980 PF01546 Peptidase family M20/M25/M40 HPY13_02985 PF00860 Permease family HPY13_02990 PF00156 Phosphoribosyl transferase domain HPY13_03000 PF07417 Sigma factor-binding transcriptional regulator Crl HPY13_03005 PF00696 Amino acid kinase family HPY13_03005 PF01472 PUA domain HPY13_03010 PF00171 Aldehyde dehydrogenase family HPY13_03015 PF03477 ATP cone domain HPY13_03020 PF01872 RibD C-terminal domain HPY13_03020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY13_03025 PF00677 Lumazine binding domain HPY13_03030 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY13_03030 PF00925 GTP cyclohydrolase II HPY13_03035 PF00885 6,7-dimethyl-8-ribityllumazine synthase HPY13_03040 PF01029 NusB family HPY13_03045 PF02769 AIR synthase related protein, C-terminal domain HPY13_03045 PF00586 AIR synthase related protein, N-terminal domain HPY13_03050 PF04608 Phosphatidylglycerophosphatase A HPY13_03055 PF11944 Protein of unknown function (DUF3461) HPY13_03060 PF08335 GlnD PII-uridylyltransferase HPY13_03060 PF01909 Nucleotidyltransferase domain HPY13_03060 PF01966 HD domain HPY13_03065 PF00557 Metallopeptidase family M24 HPY13_03070 PF00318 Ribosomal protein S2 HPY13_03075 PF00889 Elongation factor TS HPY13_03080 PF00696 Amino acid kinase family HPY13_03085 PF01765 Ribosome recycling factor HPY13_03090 PF01255 Putative undecaprenyl diphosphate synthase HPY13_03100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPY13_03100 PF13288 DXP reductoisomerase C-terminal domain HPY13_03100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPY13_03105 PF17820 PDZ domain HPY13_03105 PF02163 Peptidase family M50 HPY13_03110 PF01103 Surface antigen HPY13_03110 PF07244 Surface antigen variable number repeat HPY13_03115 PF03938 Outer membrane protein (OmpH-like) HPY13_03120 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPY13_03120 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_03125 PF07977 FabA-like domain HPY13_03130 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_03130 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HPY13_03135 PF02684 Lipid-A-disaccharide synthetase HPY13_03140 PF01351 Ribonuclease HII HPY13_03145 PF01336 OB-fold nucleic acid binding domain HPY13_03145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPY13_03145 PF14579 Helix-hairpin-helix motif HPY13_03145 PF02811 PHP domain HPY13_03145 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPY13_03150 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HPY13_03155 PF09179 TilS substrate binding domain HPY13_03155 PF11734 TilS substrate C-terminal domain HPY13_03155 PF01171 PP-loop family HPY13_03160 PF00034 Cytochrome c HPY13_03165 PF05870 Phenolic acid decarboxylase (PAD) HPY13_03170 PF00543 Nitrogen regulatory protein P-II HPY13_03175 PF03372 Endonuclease/Exonuclease/phosphatase family HPY13_03180 PF01476 LysM domain HPY13_03180 PF01464 Transglycosylase SLT domain HPY13_03185 PF16123 Hydroxyacylglutathione hydrolase C-terminus HPY13_03185 PF00753 Metallo-beta-lactamase superfamily HPY13_03190 PF08241 Methyltransferase domain HPY13_03195 PF00075 RNase H HPY13_03200 PF00929 Exonuclease HPY13_03210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY13_03210 PF02770 Acyl-CoA dehydrogenase, middle domain HPY13_03210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY13_03210 PF09317 Domain of unknown function (DUF1974) HPY13_03215 PF13580 SIS domain HPY13_03220 PF13230 Glutamine amidotransferases class-II HPY13_03225 PF00551 Formyl transferase HPY13_03230 PF00586 AIR synthase related protein, N-terminal domain HPY13_03230 PF02769 AIR synthase related protein, C-terminal domain HPY13_03240 PF00990 Diguanylate cyclase, GGDEF domain HPY13_03240 PF08448 PAS fold HPY13_03245 PF01479 S4 domain HPY13_03245 PF00849 RNA pseudouridylate synthase HPY13_03250 PF01713 Smr domain HPY13_03265 PF01963 TraB family HPY13_03270 PF03173 Putative carbohydrate binding domain HPY13_03270 PF02838 Glycosyl hydrolase family 20, domain 2 HPY13_03270 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HPY13_03270 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY13_03280 PF00403 Heavy-metal-associated domain HPY13_03285 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY13_03290 PF00691 OmpA family HPY13_03290 PF01389 OmpA-like transmembrane domain HPY13_03300 PF07715 TonB-dependent Receptor Plug Domain HPY13_03305 PF08021 Siderophore-interacting FAD-binding domain HPY13_03305 PF04954 Siderophore-interacting protein HPY13_03310 PF00550 Phosphopantetheine attachment site HPY13_03310 PF00668 Condensation domain HPY13_03310 PF00501 AMP-binding enzyme HPY13_03310 PF08242 Methyltransferase domain HPY13_03345 PF01584 CheW-like domain HPY13_03345 PF00072 Response regulator receiver domain HPY13_03350 PF01739 CheR methyltransferase, SAM binding domain HPY13_03350 PF03705 CheR methyltransferase, all-alpha domain HPY13_03355 PF00460 Flagella basal body rod protein HPY13_03360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY13_03360 PF00460 Flagella basal body rod protein HPY13_03365 PF13860 FlgD Ig-like domain HPY13_03365 PF13861 FlgD Tudor-like domain HPY13_03365 PF03963 Flagellar hook capping protein - N-terminal region HPY13_03370 PF07559 Flagellar basal body protein FlaE HPY13_03370 PF00460 Flagella basal body rod protein HPY13_03370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY13_03375 PF00460 Flagella basal body rod protein HPY13_03375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY13_03380 PF00460 Flagella basal body rod protein HPY13_03380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY13_03385 PF02107 Flagellar L-ring protein HPY13_03390 PF02119 Flagellar P-ring protein HPY13_03395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HPY13_03395 PF10135 Rod binding protein HPY13_03400 PF07196 Flagellin hook IN motif HPY13_03400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY13_03410 PF00700 Bacterial flagellin C-terminal helical region HPY13_03410 PF07196 Flagellin hook IN motif HPY13_03410 PF00669 Bacterial flagellin N-terminal helical region HPY13_03415 PF00669 Bacterial flagellin N-terminal helical region HPY13_03415 PF07196 Flagellin hook IN motif HPY13_03415 PF00700 Bacterial flagellin C-terminal helical region HPY13_03500 PF06071 Protein of unknown function (DUF933) HPY13_03500 PF01926 50S ribosome-binding GTPase HPY13_03505 PF01195 Peptidyl-tRNA hydrolase HPY13_03510 PF14572 Phosphoribosyl synthetase-associated domain HPY13_03510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPY13_03515 PF00288 GHMP kinases N terminal domain HPY13_03515 PF08544 GHMP kinases C terminal HPY13_03520 PF03550 Outer membrane lipoprotein LolB HPY13_03525 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HPY13_03525 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HPY13_03525 PF01488 Shikimate / quinate 5-dehydrogenase HPY13_03530 PF00472 RF-1 domain HPY13_03530 PF03462 PCRF domain HPY13_03535 PF13847 Methyltransferase domain HPY13_03535 PF17827 PrmC N-terminal domain HPY13_03540 PF04247 Invasion gene expression up-regulator, SirB HPY13_03545 PF13369 Transglutaminase-like superfamily HPY13_03550 PF00793 DAHP synthetase I family HPY13_03555 PF02872 5'-nucleotidase, C-terminal domain HPY13_03555 PF00149 Calcineurin-like phosphoesterase HPY13_03560 PF04073 Aminoacyl-tRNA editing domain HPY13_03565 PF00860 Permease family HPY13_03580 PF03358 NADPH-dependent FMN reductase HPY13_03585 PF03960 ArsC family HPY13_03590 PF01435 Peptidase family M48 HPY13_03590 PF13181 Tetratricopeptide repeat HPY13_03600 PF01594 AI-2E family transporter HPY13_03605 PF02743 Cache domain HPY13_03605 PF00672 HAMP domain HPY13_03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_03610 PF00578 AhpC/TSA family HPY13_03620 PF00701 Dihydrodipicolinate synthetase family HPY13_03625 PF06804 NlpB/DapX lipoprotein HPY13_03635 PF02557 D-alanyl-D-alanine carboxypeptidase HPY13_03640 PF07687 Peptidase dimerisation domain HPY13_03640 PF01546 Peptidase family M20/M25/M40 HPY13_03645 PF03960 ArsC family HPY13_03660 PF11143 Protein of unknown function (DUF2919) HPY13_03665 PF04261 Dyp-type peroxidase family HPY13_03670 PF00700 Bacterial flagellin C-terminal helical region HPY13_03670 PF07196 Flagellin hook IN motif HPY13_03670 PF00669 Bacterial flagellin N-terminal helical region HPY13_03675 PF00669 Bacterial flagellin N-terminal helical region HPY13_03675 PF00700 Bacterial flagellin C-terminal helical region HPY13_03675 PF07196 Flagellin hook IN motif HPY13_03680 PF00669 Bacterial flagellin N-terminal helical region HPY13_03680 PF07196 Flagellin hook IN motif HPY13_03680 PF00700 Bacterial flagellin C-terminal helical region HPY13_03685 PF03646 FlaG protein HPY13_03690 PF07195 Flagellar hook-associated protein 2 C-terminus HPY13_03690 PF07196 Flagellin hook IN motif HPY13_03690 PF02465 Flagellar hook-associated protein 2 N-terminus HPY13_03700 PF02561 Flagellar protein FliS HPY13_03705 PF02954 Bacterial regulatory protein, Fis family HPY13_03705 PF00158 Sigma-54 interaction domain HPY13_03705 PF06490 Flagellar regulatory protein FleQ HPY13_03710 PF00512 His Kinase A (phospho-acceptor) domain HPY13_03710 PF13426 PAS domain HPY13_03710 PF08447 PAS fold HPY13_03710 PF13493 Domain of unknown function (DUF4118) HPY13_03710 PF00989 PAS fold HPY13_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_03715 PF02954 Bacterial regulatory protein, Fis family HPY13_03715 PF00158 Sigma-54 interaction domain HPY13_03715 PF00072 Response regulator receiver domain HPY13_03720 PF02049 Flagellar hook-basal body complex protein FliE HPY13_03725 PF08345 Flagellar M-ring protein C-terminal HPY13_03725 PF01514 Secretory protein of YscJ/FliF family HPY13_03730 PF01706 FliG C-terminal domain HPY13_03730 PF14841 FliG middle domain HPY13_03730 PF14842 FliG N-terminal domain HPY13_03735 PF02108 Flagellar assembly protein FliH HPY13_03740 PF18269 T3SS EscN ATPase C-terminal domain HPY13_03740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY13_03760 PF03748 Flagellar basal body-associated protein FliL HPY13_03765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY13_03765 PF02154 Flagellar motor switch protein FliM HPY13_03770 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY13_03775 PF04347 Flagellar biosynthesis protein, FliO HPY13_03780 PF00813 FliP family HPY13_03785 PF01313 Bacterial export proteins, family 3 HPY13_03790 PF01311 Bacterial export proteins, family 1 HPY13_03795 PF01312 FlhB HrpN YscU SpaS Family HPY13_03800 PF01713 Smr domain HPY13_03805 PF05175 Methyltransferase small domain HPY13_03810 PF01264 Chorismate synthase HPY13_03815 PF03458 UPF0126 domain HPY13_03820 PF04315 Elongation factor P hydroxylase HPY13_03825 PF08891 YfcL protein HPY13_03830 PF03358 NADPH-dependent FMN reductase HPY13_03835 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HPY13_03835 PF01266 FAD dependent oxidoreductase HPY13_03840 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY13_03840 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY13_03845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY13_03845 PF11890 Domain of unknown function (DUF3410) HPY13_03845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY13_03850 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY13_03850 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY13_03855 PF01475 Ferric uptake regulator family HPY13_03865 PF03466 LysR substrate binding domain HPY13_03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_03870 PF03788 LrgA family HPY13_03875 PF04172 LrgB-like family HPY13_03880 PF00258 Flavodoxin HPY13_03890 PF12697 Alpha/beta hydrolase family HPY13_03895 PF03925 SeqA protein C-terminal domain HPY13_03895 PF17206 SeqA protein N-terminal domain HPY13_03900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY13_03900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY13_03900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY13_03900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY13_03910 PF01784 NIF3 (NGG1p interacting factor 3) HPY13_03915 PF00285 Citrate synthase, C-terminal domain HPY13_03920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY13_03925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY13_03930 PF02910 Fumarate reductase flavoprotein C-term HPY13_03930 PF00890 FAD binding domain HPY13_03935 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY13_03940 PF02779 Transketolase, pyrimidine binding domain HPY13_03940 PF16870 2-oxoglutarate dehydrogenase C-terminal HPY13_03940 PF00676 Dehydrogenase E1 component HPY13_03940 PF16078 2-oxoglutarate dehydrogenase N-terminus HPY13_03945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY13_03945 PF02817 e3 binding domain HPY13_03945 PF00364 Biotin-requiring enzyme HPY13_03950 PF08442 ATP-grasp domain HPY13_03950 PF00549 CoA-ligase HPY13_03955 PF02629 CoA binding domain HPY13_03955 PF00549 CoA-ligase HPY13_03960 PF00950 ABC 3 transport family HPY13_03970 PF01297 Zinc-uptake complex component A periplasmic HPY13_03975 PF12833 Helix-turn-helix domain HPY13_03975 PF02311 AraC-like ligand binding domain HPY13_03980 PF04023 FeoA domain HPY13_03985 PF07670 Nucleoside recognition HPY13_03985 PF07664 Ferrous iron transport protein B C terminus HPY13_03985 PF02421 Ferrous iron transport protein B HPY13_04000 PF03485 Arginyl tRNA synthetase N terminal domain HPY13_04000 PF05746 DALR anticodon binding domain HPY13_04000 PF00750 tRNA synthetases class I (R) HPY13_04015 PF00300 Histidine phosphatase superfamily (branch 1) HPY13_04020 PF00771 FHIPEP family HPY13_04025 PF00448 SRP54-type protein, GTPase domain HPY13_04030 PF10609 NUBPL iron-transfer P-loop NTPase HPY13_04035 PF04539 Sigma-70 region 3 HPY13_04035 PF04545 Sigma-70, region 4 HPY13_04035 PF04542 Sigma-70 region 2 HPY13_04040 PF00072 Response regulator receiver domain HPY13_04045 PF04344 Chemotaxis phosphatase, CheZ HPY13_04050 PF01627 Hpt domain HPY13_04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_04050 PF01584 CheW-like domain HPY13_04050 PF02895 Signal transducing histidine kinase, homodimeric domain HPY13_04050 PF00072 Response regulator receiver domain HPY13_04055 PF01339 CheB methylesterase HPY13_04055 PF00072 Response regulator receiver domain HPY13_04060 PF13614 AAA domain HPY13_04070 PF01584 CheW-like domain HPY13_04080 PF00005 ABC transporter HPY13_04085 PF03379 CcmB protein HPY13_04090 PF01578 Cytochrome C assembly protein HPY13_04095 PF04995 Heme exporter protein D (CcmD) HPY13_04100 PF03100 CcmE HPY13_04105 PF01578 Cytochrome C assembly protein HPY13_04105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HPY13_04110 PF08534 Redoxin HPY13_04115 PF03918 Cytochrome C biogenesis protein HPY13_04125 PF04333 MlaA lipoprotein HPY13_04140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY13_04140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY13_04145 PF00462 Glutaredoxin HPY13_04150 PF01751 Toprim domain HPY13_04150 PF01131 DNA topoisomerase HPY13_04155 PF00850 Histone deacetylase domain HPY13_04170 PF11893 Domain of unknown function (DUF3413) HPY13_04170 PF00884 Sulfatase HPY13_04175 PF07208 Protein of unknown function (DUF1414) HPY13_04180 PF04245 37-kD nucleoid-associated bacterial protein HPY13_04190 PF03553 Na+/H+ antiporter family HPY13_04195 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY13_04195 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY13_04200 PF01914 MarC family integral membrane protein HPY13_04205 PF00171 Aldehyde dehydrogenase family HPY13_04205 PF00465 Iron-containing alcohol dehydrogenase HPY13_04215 PF00916 Sulfate permease family HPY13_04215 PF01740 STAS domain HPY13_04220 PF10150 Ribonuclease E/G family HPY13_04220 PF00575 S1 RNA binding domain HPY13_04220 PF12111 Polyribonucleotide phosphorylase C terminal HPY13_04225 PF00849 RNA pseudouridylate synthase HPY13_04225 PF01479 S4 domain HPY13_04230 PF02545 Maf-like protein HPY13_04235 PF02620 Large ribosomal RNA subunit accumulation protein YceD HPY13_04240 PF01783 Ribosomal L32p protein family HPY13_04245 PF02504 Fatty acid synthesis protein HPY13_04250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY13_04250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY13_04255 PF00698 Acyl transferase domain HPY13_04265 PF00550 Phosphopantetheine attachment site HPY13_04270 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY13_04270 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY13_04275 PF01063 Amino-transferase class IV HPY13_04280 PF02618 YceG-like family HPY13_04285 PF02223 Thymidylate kinase HPY13_04290 PF09115 DNA polymerase III, delta subunit, C terminal HPY13_04295 PF01026 TatD related DNase HPY13_04300 PF00367 phosphotransferase system, EIIB HPY13_04300 PF02378 Phosphotransferase system, EIIC HPY13_04310 PF00209 Sodium:neurotransmitter symporter family HPY13_04325 PF01734 Patatin-like phospholipase HPY13_04330 PF00224 Pyruvate kinase, barrel domain HPY13_04330 PF02887 Pyruvate kinase, alpha/beta domain HPY13_04335 PF00480 ROK family HPY13_04340 PF01584 CheW-like domain HPY13_04340 PF00072 Response regulator receiver domain HPY13_04355 PF13847 Methyltransferase domain HPY13_04365 PF01263 Aldose 1-epimerase HPY13_04370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY13_04370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY13_04375 PF01641 SelR domain HPY13_04385 PF07023 Protein of unknown function (DUF1315) HPY13_04390 PF17763 Glutaminase/Asparaginase C-terminal domain HPY13_04390 PF00710 Asparaginase, N-terminal HPY13_04395 PF01343 Peptidase family S49 HPY13_04400 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_04400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY13_04405 PF00551 Formyl transferase HPY13_04405 PF01842 ACT domain HPY13_04415 PF04851 Type III restriction enzyme, res subunit HPY13_04415 PF13307 Helicase C-terminal domain HPY13_04420 PF00814 Glycoprotease family HPY13_04435 PF00561 alpha/beta hydrolase fold HPY13_04440 PF00501 AMP-binding enzyme HPY13_04440 PF13193 AMP-binding enzyme C-terminal domain HPY13_04445 PF01612 3'-5' exonuclease HPY13_04445 PF00570 HRDC domain HPY13_04450 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HPY13_04450 PF01694 Rhomboid family HPY13_04460 PF01966 HD domain HPY13_04460 PF13286 Phosphohydrolase-associated domain HPY13_04470 PF00155 Aminotransferase class I and II HPY13_04475 PF00425 chorismate binding enzyme HPY13_04480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY13_04480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY13_04480 PF16582 Middle domain of thiamine pyrophosphate HPY13_04485 PF12697 Alpha/beta hydrolase family HPY13_04490 PF00378 Enoyl-CoA hydratase/isomerase HPY13_04495 PF13378 Enolase C-terminal domain-like HPY13_04500 PF00501 AMP-binding enzyme HPY13_04500 PF13193 AMP-binding enzyme C-terminal domain HPY13_04505 PF03594 Benzoate membrane transport protein HPY13_04510 PF07690 Major Facilitator Superfamily HPY13_04530 PF04170 NlpE N-terminal domain HPY13_04535 PF03776 Septum formation topological specificity factor MinE HPY13_04540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY13_04545 PF03775 Septum formation inhibitor MinC, C-terminal domain HPY13_04545 PF05209 Septum formation inhibitor MinC, N-terminal domain HPY13_04550 PF05166 YcgL domain HPY13_04555 PF13406 Transglycosylase SLT domain HPY13_04560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_04560 PF03466 LysR substrate binding domain HPY13_04565 PF01773 Na+ dependent nucleoside transporter N-terminus HPY13_04565 PF07670 Nucleoside recognition HPY13_04565 PF07662 Na+ dependent nucleoside transporter C-terminus HPY13_04570 PF06483 Chitinase C HPY13_04570 PF00704 Glycosyl hydrolases family 18 HPY13_04575 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY13_04580 PF00384 Molybdopterin oxidoreductase HPY13_04580 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY13_04580 PF01568 Molydopterin dinucleotide binding domain HPY13_04590 PF03466 LysR substrate binding domain HPY13_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_04595 PF01494 FAD binding domain HPY13_04600 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HPY13_04605 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPY13_04605 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPY13_04650 PF13188 PAS domain HPY13_04650 PF03707 Bacterial signalling protein N terminal repeat HPY13_04650 PF00990 Diguanylate cyclase, GGDEF domain HPY13_04650 PF00563 EAL domain HPY13_04660 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HPY13_04665 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY13_04670 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY13_04675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY13_04680 PF00072 Response regulator receiver domain HPY13_04680 PF02954 Bacterial regulatory protein, Fis family HPY13_04680 PF00158 Sigma-54 interaction domain HPY13_04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_04685 PF00512 His Kinase A (phospho-acceptor) domain HPY13_04685 PF02743 Cache domain HPY13_04695 PF05698 Bacterial trigger factor protein (TF) C-terminus HPY13_04695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY13_04695 PF05697 Bacterial trigger factor protein (TF) HPY13_04700 PF00574 Clp protease HPY13_04705 PF06689 ClpX C4-type zinc finger HPY13_04705 PF10431 C-terminal, D2-small domain, of ClpB protein HPY13_04705 PF07724 AAA domain (Cdc48 subfamily) HPY13_04710 PF00004 ATPase family associated with various cellular activities (AAA) HPY13_04710 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY13_04710 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPY13_04715 PF00216 Bacterial DNA-binding protein HPY13_04720 PF13145 PPIC-type PPIASE domain HPY13_04730 PF02224 Cytidylate kinase HPY13_04735 PF00575 S1 RNA binding domain HPY13_04740 PF00216 Bacterial DNA-binding protein HPY13_04745 PF06305 Lipopolysaccharide assembly protein A domain HPY13_04750 PF18073 Rubredoxin metal binding domain HPY13_04755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY13_04760 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_04765 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY13_04765 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_04770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY13_04775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_04775 PF00005 ABC transporter HPY13_04780 PF00005 ABC transporter HPY13_04780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_04795 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HPY13_04805 PF03466 LysR substrate binding domain HPY13_04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_04815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY13_04815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY13_04820 PF01037 Lrp/AsnC ligand binding domain HPY13_04825 PF09397 Ftsk gamma domain HPY13_04825 PF01580 FtsK/SpoIIIE family HPY13_04825 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HPY13_04825 PF17854 FtsK alpha domain HPY13_04830 PF02600 Disulfide bond formation protein DsbB HPY13_04835 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HPY13_04840 PF07840 FadR C-terminal domain HPY13_04840 PF00392 Bacterial regulatory proteins, gntR family HPY13_04850 PF00672 HAMP domain HPY13_04850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_04855 PF01230 HIT domain HPY13_04870 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HPY13_04870 PF13036 Peptidoglycan-synthase activator LpoB HPY13_04880 PF05728 Uncharacterised protein family (UPF0227) HPY13_04885 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_04895 PF07968 Leukocidin/Hemolysin toxin family HPY13_04895 PF12563 Hemolytic toxin N terminal HPY13_04895 PF16458 Beta-prism lectin HPY13_04905 PF00271 Helicase conserved C-terminal domain HPY13_04905 PF03461 TRCF domain HPY13_04905 PF17757 UvrB interaction domain HPY13_04905 PF02559 CarD-like/TRCF domain HPY13_04905 PF00270 DEAD/DEAH box helicase HPY13_04915 PF02687 FtsX-like permease family HPY13_04915 PF12704 MacB-like periplasmic core domain HPY13_04920 PF00005 ABC transporter HPY13_04925 PF12704 MacB-like periplasmic core domain HPY13_04925 PF02687 FtsX-like permease family HPY13_04935 PF00753 Metallo-beta-lactamase superfamily HPY13_04935 PF13567 Domain of unknown function (DUF4131) HPY13_04935 PF03772 Competence protein HPY13_04940 PF00005 ABC transporter HPY13_04940 PF00664 ABC transporter transmembrane region HPY13_04945 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HPY13_04950 PF03966 Trm112p-like protein HPY13_04955 PF02348 Cytidylyltransferase HPY13_04960 PF04293 SpoVR like protein HPY13_04965 PF04285 Protein of unknown function (DUF444) HPY13_04970 PF06798 PrkA serine protein kinase C-terminal domain HPY13_04970 PF08298 PrkA AAA domain HPY13_04975 PF03887 YfbU domain HPY13_04985 PF04055 Radical SAM superfamily HPY13_04990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_04990 PF00672 HAMP domain HPY13_04990 PF12729 Four helix bundle sensory module for signal transduction HPY13_05000 PF02901 Pyruvate formate lyase-like HPY13_05000 PF01228 Glycine radical HPY13_05010 PF00005 ABC transporter HPY13_05015 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_05020 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_05025 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_05030 PF03372 Endonuclease/Exonuclease/phosphatase family HPY13_05035 PF00672 HAMP domain HPY13_05035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_05040 PF10689 Protein of unknown function (DUF2496) HPY13_05045 PF07445 Primosomal replication protein priC HPY13_05050 PF01925 Sulfite exporter TauE/SafE HPY13_05055 PF13307 Helicase C-terminal domain HPY13_05055 PF06733 DEAD_2 HPY13_05060 PF13609 Gram-negative porin HPY13_05065 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY13_05070 PF02810 SEC-C motif HPY13_05075 PF00563 EAL domain HPY13_05075 PF08668 HDOD domain HPY13_05080 PF00149 Calcineurin-like phosphoesterase HPY13_05085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY13_05090 PF09190 DALR domain HPY13_05090 PF01406 tRNA synthetases class I (C) catalytic domain HPY13_05095 PF02075 Crossover junction endodeoxyribonuclease RuvC HPY13_05100 PF07499 RuvA, C-terminal domain HPY13_05100 PF01330 RuvA N terminal domain HPY13_05105 PF05491 RuvB C-terminal winged helix domain HPY13_05105 PF17864 RuvB AAA lid domain HPY13_05105 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPY13_05110 PF01654 Cytochrome bd terminal oxidase subunit I HPY13_05115 PF02322 Cytochrome bd terminal oxidase subunit II HPY13_05120 PF08173 Membrane bound YbgT-like protein HPY13_05125 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HPY13_05130 PF03061 Thioesterase superfamily HPY13_05135 PF01618 MotA/TolQ/ExbB proton channel family HPY13_05140 PF02472 Biopolymer transport protein ExbD/TolR HPY13_05150 PF04052 TolB amino-terminal domain HPY13_05150 PF07676 WD40-like Beta Propeller Repeat HPY13_05155 PF00691 OmpA family HPY13_05165 PF02445 Quinolinate synthetase A protein HPY13_05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_05175 PF00072 Response regulator receiver domain HPY13_05175 PF00512 His Kinase A (phospho-acceptor) domain HPY13_05175 PF09308 LuxQ, periplasmic HPY13_05180 PF06610 L-alanine exporter HPY13_05185 PF00171 Aldehyde dehydrogenase family HPY13_05190 PF02954 Bacterial regulatory protein, Fis family HPY13_05190 PF01590 GAF domain HPY13_05190 PF00158 Sigma-54 interaction domain HPY13_05195 PF09905 DNA-binding protein VF530 HPY13_05205 PF03441 FAD binding domain of DNA photolyase HPY13_05205 PF00875 DNA photolyase HPY13_05235 PF13088 BNR repeat-like domain HPY13_05235 PF09264 Vibrio cholerae sialidase, lectin insertion HPY13_05240 PF01979 Amidohydrolase family HPY13_05245 PF00480 ROK family HPY13_05250 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HPY13_05255 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY13_05260 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY13_05265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY13_05270 PF00701 Dihydrodipicolinate synthetase family HPY13_05275 PF01418 Helix-turn-helix domain, rpiR family HPY13_05275 PF01380 SIS domain HPY13_05280 PF01344 Kelch motif HPY13_05285 PF07646 Kelch motif HPY13_05295 PF02368 Bacterial Ig-like domain (group 2) HPY13_05295 PF11999 Protein of unknown function (DUF3494) HPY13_05320 PF00561 alpha/beta hydrolase fold HPY13_05325 PF03347 Vibrio thermostable direct hemolysin HPY13_05330 PF13402 Peptidase M60, enhancin and enhancin-like HPY13_05330 PF17291 N-terminal domain of M60-like peptidases HPY13_05330 PF13322 Domain of unknown function (DUF4092) HPY13_05435 PF00771 FHIPEP family HPY13_05440 PF01312 FlhB HrpN YscU SpaS Family HPY13_05445 PF00691 OmpA family HPY13_05470 PF00486 Transcriptional regulatory protein, C terminal HPY13_05480 PF00813 FliP family HPY13_05495 PF03958 Bacterial type II/III secretion system short domain HPY13_05495 PF00263 Bacterial type II and III secretion system protein HPY13_05500 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY13_05500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY13_05500 PF18269 T3SS EscN ATPase C-terminal domain HPY13_05545 PF03545 Yersinia virulence determinant (YopE) HPY13_05545 PF09020 YopE, N terminal HPY13_05560 PF13356 Arm DNA-binding domain HPY13_05560 PF00589 Phage integrase family HPY13_05570 PF00873 AcrB/AcrD/AcrF family HPY13_05575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY13_05585 PF02470 MlaD protein HPY13_05590 PF04403 Paraquat-inducible protein A HPY13_05595 PF05552 Conserved TM helix HPY13_05595 PF00924 Mechanosensitive ion channel HPY13_05615 PF08362 YcdC-like protein, C-terminal region HPY13_05615 PF00440 Bacterial regulatory proteins, tetR family HPY13_05620 PF00171 Aldehyde dehydrogenase family HPY13_05625 PF07383 Protein of unknown function (DUF1496) HPY13_05640 PF16295 Tetracyclin repressor-like, C-terminal domain HPY13_05640 PF00440 Bacterial regulatory proteins, tetR family HPY13_05645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY13_05645 PF09317 Domain of unknown function (DUF1974) HPY13_05645 PF02770 Acyl-CoA dehydrogenase, middle domain HPY13_05645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY13_05650 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY13_05650 PF07055 Enoyl reductase FAD binding domain HPY13_05650 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY13_05655 PF01176 Translation initiation factor 1A / IF-1 HPY13_05660 PF04377 Arginine-tRNA-protein transferase, C terminus HPY13_05660 PF04376 Arginine-tRNA-protein transferase, N terminus HPY13_05665 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HPY13_05670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY13_05675 PF10692 Protein of unknown function (DUF2498) HPY13_05680 PF08272 Topoisomerase I zinc-ribbon-like HPY13_05680 PF01396 Topoisomerase DNA binding C4 zinc finger HPY13_05680 PF01751 Toprim domain HPY13_05680 PF01131 DNA topoisomerase HPY13_05685 PF00483 Nucleotidyl transferase HPY13_05690 PF08323 Starch synthase catalytic domain HPY13_05690 PF00534 Glycosyl transferases group 1 HPY13_05710 PF04993 TfoX N-terminal domain HPY13_05710 PF04994 TfoX C-terminal domain HPY13_05715 PF00356 Bacterial regulatory proteins, lacI family HPY13_05720 PF02613 Nitrate reductase delta subunit HPY13_05725 PF00072 Response regulator receiver domain HPY13_05725 PF00486 Transcriptional regulatory protein, C terminal HPY13_05730 PF02698 DUF218 domain HPY13_05735 PF13847 Methyltransferase domain HPY13_05740 PF03882 MukF winged-helix domain HPY13_05740 PF17193 MukF C-terminal domain HPY13_05740 PF17192 MukF middle domain HPY13_05745 PF04288 MukE-like family HPY13_05750 PF04310 MukB N-terminal HPY13_05750 PF16330 MukB hinge domain HPY13_05755 PF00465 Iron-containing alcohol dehydrogenase HPY13_05760 PF06719 AraC-type transcriptional regulator N-terminus HPY13_05760 PF12833 Helix-turn-helix domain HPY13_05770 PF01037 Lrp/AsnC ligand binding domain HPY13_05775 PF01810 LysE type translocator HPY13_05780 PF02281 Transposase Tn5 dimerisation domain HPY13_05780 PF01609 Transposase DDE domain HPY13_05780 PF14706 Transposase DNA-binding HPY13_05785 PF08497 Radical SAM N-terminal HPY13_05785 PF04055 Radical SAM superfamily HPY13_05785 PF11842 Domain of unknown function (DUF3362) HPY13_05790 PF08447 PAS fold HPY13_05790 PF08448 PAS fold HPY13_05790 PF00563 EAL domain HPY13_05790 PF00990 Diguanylate cyclase, GGDEF domain HPY13_05795 PF05193 Peptidase M16 inactive domain HPY13_05795 PF00675 Insulinase (Peptidase family M16) HPY13_05810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_05810 PF03466 LysR substrate binding domain HPY13_05815 PF08267 Cobalamin-independent synthase, N-terminal domain HPY13_05815 PF01717 Cobalamin-independent synthase, Catalytic domain HPY13_05825 PF03795 YCII-related domain HPY13_05830 PF03061 Thioesterase superfamily HPY13_05835 PF04279 Intracellular septation protein A HPY13_05845 PF02698 DUF218 domain HPY13_05850 PF01370 NAD dependent epimerase/dehydratase family HPY13_05860 PF01226 Formate/nitrite transporter HPY13_05865 PF06796 Periplasmic nitrate reductase protein NapE HPY13_05870 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY13_05875 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY13_05875 PF00384 Molybdopterin oxidoreductase HPY13_05875 PF01568 Molydopterin dinucleotide binding domain HPY13_05890 PF02833 DHHA2 domain HPY13_05890 PF01368 DHH family HPY13_05905 PF00005 ABC transporter HPY13_05910 PF00005 ABC transporter HPY13_05910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_05915 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_05915 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY13_05920 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_05925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY13_05930 PF02954 Bacterial regulatory protein, Fis family HPY13_05930 PF00158 Sigma-54 interaction domain HPY13_05935 PF04012 PspA/IM30 family HPY13_05950 PF00529 HlyD membrane-fusion protein of T1SS HPY13_05950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY13_05955 PF13533 Biotin-lipoyl like HPY13_05960 PF00873 AcrB/AcrD/AcrF family HPY13_05965 PF03352 Methyladenine glycosylase HPY13_05970 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY13_05975 PF13396 Phospholipase_D-nuclease N-terminal HPY13_05975 PF13091 PLD-like domain HPY13_05980 PF00209 Sodium:neurotransmitter symporter family HPY13_05985 PF00849 RNA pseudouridylate synthase HPY13_05990 PF01066 CDP-alcohol phosphatidyltransferase HPY13_05995 PF00005 ABC transporter HPY13_06000 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_06005 PF13416 Bacterial extracellular solute-binding protein HPY13_06015 PF06945 Protein of unknown function (DUF1289) HPY13_06030 PF00005 ABC transporter HPY13_06035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY13_06040 PF03222 Tryptophan/tyrosine permease family HPY13_06050 PF01769 Divalent cation transporter HPY13_06050 PF03448 MgtE intracellular N domain HPY13_06050 PF00571 CBS domain HPY13_06055 PF00072 Response regulator receiver domain HPY13_06055 PF09308 LuxQ, periplasmic HPY13_06055 PF00512 His Kinase A (phospho-acceptor) domain HPY13_06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_06060 PF03707 Bacterial signalling protein N terminal repeat HPY13_06060 PF00990 Diguanylate cyclase, GGDEF domain HPY13_06060 PF00563 EAL domain HPY13_06070 PF08453 Peptidase family M9 N-terminal HPY13_06070 PF04151 Bacterial pre-peptidase C-terminal domain HPY13_06070 PF01752 Collagenase HPY13_06080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY13_06080 PF12793 Sugar transport-related sRNA regulator N-term HPY13_06100 PF12729 Four helix bundle sensory module for signal transduction HPY13_06100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_06100 PF00672 HAMP domain HPY13_06110 PF01590 GAF domain HPY13_06110 PF00990 Diguanylate cyclase, GGDEF domain HPY13_06110 PF00360 Phytochrome region HPY13_06110 PF00563 EAL domain HPY13_06115 PF01386 Ribosomal L25p family HPY13_06120 PF11808 Phosphate regulon sensor protein PhoR HPY13_06120 PF00989 PAS fold HPY13_06120 PF00512 His Kinase A (phospho-acceptor) domain HPY13_06120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_06125 PF00072 Response regulator receiver domain HPY13_06125 PF00486 Transcriptional regulatory protein, C terminal HPY13_06135 PF00271 Helicase conserved C-terminal domain HPY13_06135 PF04851 Type III restriction enzyme, res subunit HPY13_06140 PF01479 S4 domain HPY13_06140 PF00849 RNA pseudouridylate synthase HPY13_06145 PF07690 Major Facilitator Superfamily HPY13_06155 PF13460 NAD(P)H-binding HPY13_06155 PF11066 Protein of unknown function (DUF2867) HPY13_06160 PF01554 MatE HPY13_06165 PF00005 ABC transporter HPY13_06180 PF06965 Na+/H+ antiporter 1 HPY13_06185 PF00202 Aminotransferase class-III HPY13_06190 PF16653 Saccharopine dehydrogenase C-terminal domain HPY13_06190 PF03435 Saccharopine dehydrogenase NADP binding domain HPY13_06200 PF05736 OprF membrane domain HPY13_06200 PF00691 OmpA family HPY13_06205 PF02321 Outer membrane efflux protein HPY13_06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_06225 PF03466 LysR substrate binding domain HPY13_06235 PF01863 Protein of unknown function DUF45 HPY13_06240 PF05971 RNA methyltransferase HPY13_06255 PF04204 Homoserine O-succinyltransferase HPY13_06275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY13_06290 PF17203 Single cache domain 3 HPY13_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_06290 PF00989 PAS fold HPY13_06290 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HPY13_06295 PF12431 Transcriptional regulator HPY13_06295 PF00072 Response regulator receiver domain HPY13_06305 PF01584 CheW-like domain HPY13_06305 PF00072 Response regulator receiver domain HPY13_06325 PF00072 Response regulator receiver domain HPY13_06325 PF00990 Diguanylate cyclase, GGDEF domain HPY13_06345 PF07690 Major Facilitator Superfamily HPY13_06350 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HPY13_06350 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HPY13_06355 PF10509 Galactokinase galactose-binding signature HPY13_06355 PF08544 GHMP kinases C terminal HPY13_06355 PF00288 GHMP kinases N terminal domain HPY13_06360 PF01263 Aldose 1-epimerase HPY13_06365 PF00990 Diguanylate cyclase, GGDEF domain HPY13_06370 PF00563 EAL domain HPY13_06370 PF17154 Gammaproteobacterial periplasmic sensor domain HPY13_06370 PF00990 Diguanylate cyclase, GGDEF domain HPY13_06370 PF00672 HAMP domain HPY13_06380 PF00205 Thiamine pyrophosphate enzyme, central domain HPY13_06380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY13_06380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY13_06385 PF03306 Alpha-acetolactate decarboxylase HPY13_06390 PF03466 LysR substrate binding domain HPY13_06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_06395 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HPY13_06400 PF00361 Proton-conducting membrane transporter HPY13_06400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY13_06405 PF03466 LysR substrate binding domain HPY13_06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_06410 PF00501 AMP-binding enzyme HPY13_06410 PF13193 AMP-binding enzyme C-terminal domain HPY13_06440 PF10415 Fumarase C C-terminus HPY13_06440 PF00206 Lyase HPY13_06450 PF01654 Cytochrome bd terminal oxidase subunit I HPY13_06455 PF02322 Cytochrome bd terminal oxidase subunit II HPY13_06460 PF12704 MacB-like periplasmic core domain HPY13_06460 PF02687 FtsX-like permease family HPY13_06460 PF00005 ABC transporter HPY13_06465 PF02687 FtsX-like permease family HPY13_06465 PF12704 MacB-like periplasmic core domain HPY13_06465 PF00005 ABC transporter HPY13_06470 PF12704 MacB-like periplasmic core domain HPY13_06470 PF00005 ABC transporter HPY13_06470 PF02687 FtsX-like permease family HPY13_06480 PF00529 HlyD membrane-fusion protein of T1SS HPY13_06490 PF00141 Peroxidase HPY13_06495 PF00232 Glycosyl hydrolase family 1 HPY13_06500 PF00356 Bacterial regulatory proteins, lacI family HPY13_06505 PF01042 Endoribonuclease L-PSP HPY13_06510 PF04074 YhcH/YjgK/YiaL HPY13_06515 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY13_06520 PF00455 DeoR C terminal sensor domain HPY13_06520 PF08220 DeoR-like helix-turn-helix domain HPY13_06525 PF00005 ABC transporter HPY13_06525 PF17912 MalK OB fold domain HPY13_06530 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_06535 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_06540 PF13416 Bacterial extracellular solute-binding protein HPY13_06550 PF01618 MotA/TolQ/ExbB proton channel family HPY13_06555 PF01618 MotA/TolQ/ExbB proton channel family HPY13_06560 PF02472 Biopolymer transport protein ExbD/TolR HPY13_06565 PF03544 Gram-negative bacterial TonB protein C-terminal HPY13_06575 PF01068 ATP dependent DNA ligase domain HPY13_06575 PF14743 DNA ligase OB-like domain HPY13_06585 PF01554 MatE HPY13_06595 PF03881 Fructosamine kinase HPY13_06605 PF00877 NlpC/P60 family HPY13_06610 PF00672 HAMP domain HPY13_06610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_06610 PF12729 Four helix bundle sensory module for signal transduction HPY13_06625 PF00480 ROK family HPY13_06635 PF03454 MoeA C-terminal region (domain IV) HPY13_06635 PF03453 MoeA N-terminal region (domain I and II) HPY13_06635 PF00994 Probable molybdopterin binding domain HPY13_06640 PF12804 MobA-like NTP transferase domain HPY13_06645 PF08402 TOBE domain HPY13_06645 PF00005 ABC transporter HPY13_06650 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_06655 PF12849 PBP superfamily domain HPY13_06660 PF02954 Bacterial regulatory protein, Fis family HPY13_06660 PF00158 Sigma-54 interaction domain HPY13_06660 PF00072 Response regulator receiver domain HPY13_06665 PF00512 His Kinase A (phospho-acceptor) domain HPY13_06665 PF00989 PAS fold HPY13_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_06670 PF12848 ABC transporter HPY13_06670 PF00005 ABC transporter HPY13_06675 PF02634 FdhD/NarQ family HPY13_06695 PF02613 Nitrate reductase delta subunit HPY13_06705 PF01568 Molydopterin dinucleotide binding domain HPY13_06705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY13_06705 PF00384 Molybdopterin oxidoreductase HPY13_06710 PF13247 4Fe-4S dicluster domain HPY13_06725 PF02146 Sir2 family HPY13_06730 PF04461 Protein of unknown function (DUF520) HPY13_06735 PF00793 DAHP synthetase I family HPY13_06750 PF13509 S1 domain HPY13_06750 PF17783 CvfB-like winged helix domain HPY13_06755 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HPY13_06755 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HPY13_06755 PF01189 16S rRNA methyltransferase RsmB/F HPY13_06760 PF02470 MlaD protein HPY13_06765 PF04403 Paraquat-inducible protein A HPY13_06770 PF00664 ABC transporter transmembrane region HPY13_06770 PF00005 ABC transporter HPY13_06775 PF13185 GAF domain HPY13_06780 PF17516 ProQ C-terminal domain HPY13_06780 PF04352 ProQ/FINO family HPY13_06785 PF11818 C-terminal domain of tail specific protease (DUF3340) HPY13_06785 PF00595 PDZ domain HPY13_06785 PF03572 Peptidase family S41 HPY13_06785 PF17804 Tail specific protease N-terminal domain HPY13_06795 PF11940 Domain of unknown function (DUF3458) Ig-like fold HPY13_06795 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HPY13_06795 PF01433 Peptidase family M1 domain HPY13_06805 PF05088 Bacterial NAD-glutamate dehydrogenase HPY13_06810 PF01180 Dihydroorotate dehydrogenase HPY13_06815 PF07126 Cell-division protein ZapC HPY13_06820 PF10672 S-adenosylmethionine-dependent methyltransferase HPY13_06820 PF02926 THUMP domain HPY13_06820 PF01170 Putative RNA methylase family UPF0020 HPY13_06840 PF04957 Ribosome modulation factor HPY13_06845 PF07977 FabA-like domain HPY13_06850 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY13_06850 PF13654 AAA domain HPY13_06855 PF17414 MatP C-terminal ribbon-helix-helix domain HPY13_06855 PF06303 MatP N-terminal domain HPY13_06935 PF12146 Serine aminopeptidase, S33 HPY13_06935 PF07634 RtxA repeat HPY13_06935 PF11713 Peptidase C80 family HPY13_06935 PF11647 Membrane Localization Domain HPY13_06935 PF16671 Actin cross-linking domain HPY13_06940 PF02794 RTX toxin acyltransferase family HPY13_06950 PF00005 ABC transporter HPY13_06950 PF03412 Peptidase C39 family HPY13_06950 PF00664 ABC transporter transmembrane region HPY13_06960 PF03412 Peptidase C39 family HPY13_06960 PF00664 ABC transporter transmembrane region HPY13_06960 PF00005 ABC transporter HPY13_06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_06965 PF00072 Response regulator receiver domain HPY13_06965 PF09308 LuxQ, periplasmic HPY13_06965 PF00512 His Kinase A (phospho-acceptor) domain HPY13_06980 PF00115 Cytochrome C and Quinol oxidase polypeptide I HPY13_06995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY13_06995 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HPY13_07005 PF00403 Heavy-metal-associated domain HPY13_07020 PF00027 Cyclic nucleotide-binding domain HPY13_07020 PF13545 Crp-like helix-turn-helix domain HPY13_07025 PF00582 Universal stress protein family HPY13_07030 PF01171 PP-loop family HPY13_07050 PF08402 TOBE domain HPY13_07050 PF00005 ABC transporter HPY13_07055 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_07060 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_07065 PF13416 Bacterial extracellular solute-binding protein HPY13_07070 PF13416 Bacterial extracellular solute-binding protein HPY13_07085 PF01235 Sodium:alanine symporter family HPY13_07090 PF01810 LysE type translocator HPY13_07135 PF04717 Type VI secretion system, phage-baseplate injector HPY13_07135 PF16671 Actin cross-linking domain HPY13_07140 PF05638 Type VI secretion system effector, Hcp HPY13_07145 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HPY13_07150 PF02743 Cache domain HPY13_07150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07150 PF00672 HAMP domain HPY13_07155 PF07690 Major Facilitator Superfamily HPY13_07160 PF00529 HlyD membrane-fusion protein of T1SS HPY13_07160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY13_07165 PF02321 Outer membrane efflux protein HPY13_07175 PF00270 DEAD/DEAH box helicase HPY13_07175 PF00271 Helicase conserved C-terminal domain HPY13_07180 PF13426 PAS domain HPY13_07180 PF08447 PAS fold HPY13_07180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07185 PF00672 HAMP domain HPY13_07185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07185 PF12729 Four helix bundle sensory module for signal transduction HPY13_07190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07190 PF00672 HAMP domain HPY13_07190 PF02743 Cache domain HPY13_07195 PF01584 CheW-like domain HPY13_07200 PF00072 Response regulator receiver domain HPY13_07200 PF01339 CheB methylesterase HPY13_07210 PF01739 CheR methyltransferase, SAM binding domain HPY13_07210 PF03705 CheR methyltransferase, all-alpha domain HPY13_07215 PF02895 Signal transducing histidine kinase, homodimeric domain HPY13_07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_07215 PF01627 Hpt domain HPY13_07215 PF01584 CheW-like domain HPY13_07215 PF00072 Response regulator receiver domain HPY13_07220 PF07194 P2 response regulator binding domain HPY13_07220 PF01627 Hpt domain HPY13_07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_07220 PF02895 Signal transducing histidine kinase, homodimeric domain HPY13_07220 PF01584 CheW-like domain HPY13_07230 PF00072 Response regulator receiver domain HPY13_07235 PF00672 HAMP domain HPY13_07235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07240 PF00893 Small Multidrug Resistance protein HPY13_07245 PF00875 DNA photolyase HPY13_07245 PF03441 FAD binding domain of DNA photolyase HPY13_07250 PF07690 Major Facilitator Superfamily HPY13_07255 PF03466 LysR substrate binding domain HPY13_07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_07265 PF03099 Biotin/lipoate A/B protein ligase family HPY13_07265 PF10437 Bacterial lipoate protein ligase C-terminus HPY13_07270 PF00012 Hsp70 protein HPY13_07280 PF00270 DEAD/DEAH box helicase HPY13_07280 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HPY13_07280 PF11898 Domain of unknown function (DUF3418) HPY13_07280 PF04408 Helicase associated domain (HA2) HPY13_07280 PF00271 Helicase conserved C-terminal domain HPY13_07300 PF00563 EAL domain HPY13_07300 PF03707 Bacterial signalling protein N terminal repeat HPY13_07300 PF00990 Diguanylate cyclase, GGDEF domain HPY13_07310 PF00012 Hsp70 protein HPY13_07315 PF00012 Hsp70 protein HPY13_07320 PF17158 Membrane-associated sensor, integral membrane domain HPY13_07320 PF00990 Diguanylate cyclase, GGDEF domain HPY13_07330 PF03707 Bacterial signalling protein N terminal repeat HPY13_07330 PF00990 Diguanylate cyclase, GGDEF domain HPY13_07330 PF00563 EAL domain HPY13_07350 PF06508 Queuosine biosynthesis protein QueC HPY13_07355 PF04055 Radical SAM superfamily HPY13_07365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY13_07365 PF10414 Sirohaem synthase dimerisation region HPY13_07365 PF14824 Sirohaem biosynthesis protein central HPY13_07370 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_07375 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_07380 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_07385 PF00005 ABC transporter HPY13_07390 PF01027 Inhibitor of apoptosis-promoting Bax1 HPY13_07395 PF04358 DsrC like protein HPY13_07400 PF00708 Acylphosphatase HPY13_07410 PF00990 Diguanylate cyclase, GGDEF domain HPY13_07415 PF08534 Redoxin HPY13_07415 PF00462 Glutaredoxin HPY13_07420 PF01627 Hpt domain HPY13_07420 PF00672 HAMP domain HPY13_07420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY13_07420 PF00072 Response regulator receiver domain HPY13_07420 PF00512 His Kinase A (phospho-acceptor) domain HPY13_07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_07425 PF00072 Response regulator receiver domain HPY13_07430 PF14497 Glutathione S-transferase, C-terminal domain HPY13_07430 PF02798 Glutathione S-transferase, N-terminal domain HPY13_07440 PF04209 homogentisate 1,2-dioxygenase HPY13_07445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY13_07450 PF07687 Peptidase dimerisation domain HPY13_07450 PF01546 Peptidase family M20/M25/M40 HPY13_07465 PF00501 AMP-binding enzyme HPY13_07465 PF13193 AMP-binding enzyme C-terminal domain HPY13_07465 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY13_07470 PF04303 PrpF protein HPY13_07475 PF00694 Aconitase C-terminal domain HPY13_07475 PF00330 Aconitase family (aconitate hydratase) HPY13_07480 PF00285 Citrate synthase, C-terminal domain HPY13_07490 PF00392 Bacterial regulatory proteins, gntR family HPY13_07490 PF07729 FCD domain HPY13_07505 PF01970 Tripartite tricarboxylate transporter TctA family HPY13_07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_07510 PF03466 LysR substrate binding domain HPY13_07515 PF00593 TonB dependent receptor HPY13_07515 PF07715 TonB-dependent Receptor Plug Domain HPY13_07540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY13_07540 PF00529 HlyD membrane-fusion protein of T1SS HPY13_07555 PF02653 Branched-chain amino acid transport system / permease component HPY13_07560 PF00005 ABC transporter HPY13_07565 PF13407 Periplasmic binding protein domain HPY13_07585 PF00072 Response regulator receiver domain HPY13_07585 PF00486 Transcriptional regulatory protein, C terminal HPY13_07590 PF00672 HAMP domain HPY13_07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_07590 PF00512 His Kinase A (phospho-acceptor) domain HPY13_07595 PF06629 MltA-interacting protein MipA HPY13_07600 PF04393 Protein of unknown function (DUF535) HPY13_07605 PF02954 Bacterial regulatory protein, Fis family HPY13_07605 PF00158 Sigma-54 interaction domain HPY13_07605 PF00072 Response regulator receiver domain HPY13_07610 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_07610 PF00512 His Kinase A (phospho-acceptor) domain HPY13_07615 PF00939 Sodium:sulfate symporter transmembrane region HPY13_07620 PF00672 HAMP domain HPY13_07620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07625 PF00842 Alanine racemase, C-terminal domain HPY13_07625 PF01168 Alanine racemase, N-terminal domain HPY13_07630 PF00892 EamA-like transporter family HPY13_07640 PF13302 Acetyltransferase (GNAT) domain HPY13_07645 PF18024 Helix-turn-helix domain HPY13_07645 PF00158 Sigma-54 interaction domain HPY13_07650 PF05128 Domain of unknown function (DUF697) HPY13_07655 PF04317 YcjX-like family, DUF463 HPY13_07670 PF04715 Anthranilate synthase component I, N terminal region HPY13_07670 PF00425 chorismate binding enzyme HPY13_07675 PF00293 NUDIX domain HPY13_07680 PF03222 Tryptophan/tyrosine permease family HPY13_07685 PF03313 Serine dehydratase alpha chain HPY13_07685 PF03315 Serine dehydratase beta chain HPY13_07690 PF01242 6-pyruvoyl tetrahydropterin synthase HPY13_07700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07700 PF12729 Four helix bundle sensory module for signal transduction HPY13_07700 PF00672 HAMP domain HPY13_07705 PF01336 OB-fold nucleic acid binding domain HPY13_07705 PF00152 tRNA synthetases class II (D, K and N) HPY13_07710 PF08543 Phosphomethylpyrimidine kinase HPY13_07715 PF01966 HD domain HPY13_07715 PF00672 HAMP domain HPY13_07720 PF00155 Aminotransferase class I and II HPY13_07735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07735 PF17200 Single Cache domain 2 HPY13_07735 PF00672 HAMP domain HPY13_07740 PF04349 Periplasmic glucan biosynthesis protein, MdoG HPY13_07745 PF13506 Glycosyl transferase family 21 HPY13_07750 PF00356 Bacterial regulatory proteins, lacI family HPY13_07755 PF04794 YdjC-like protein HPY13_07760 PF11975 Family 4 glycosyl hydrolase C-terminal domain HPY13_07760 PF02056 Family 4 glycosyl hydrolase HPY13_07765 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HPY13_07770 PF02378 Phosphotransferase system, EIIC HPY13_07775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY13_07780 PF01522 Polysaccharide deacetylase HPY13_07785 PF02028 BCCT, betaine/carnitine/choline family transporter HPY13_07790 PF01047 MarR family HPY13_07795 PF00196 Bacterial regulatory proteins, luxR family HPY13_07795 PF00072 Response regulator receiver domain HPY13_07800 PF17200 Single Cache domain 2 HPY13_07800 PF07730 Histidine kinase HPY13_07805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY13_07815 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY13_07830 PF00753 Metallo-beta-lactamase superfamily HPY13_07835 PF05951 Bacterial protein of unknown function (DUF882) HPY13_07865 PF00925 GTP cyclohydrolase II HPY13_07875 PF07690 Major Facilitator Superfamily HPY13_07890 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY13_07890 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY13_07900 PF02867 Ribonucleotide reductase, barrel domain HPY13_07900 PF00317 Ribonucleotide reductase, all-alpha domain HPY13_07900 PF03477 ATP cone domain HPY13_07905 PF00268 Ribonucleotide reductase, small chain HPY13_07910 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY13_07910 PF00970 Oxidoreductase FAD-binding domain HPY13_07910 PF00175 Oxidoreductase NAD-binding domain HPY13_07920 PF00994 Probable molybdopterin binding domain HPY13_07935 PF00672 HAMP domain HPY13_07935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_07935 PF17200 Single Cache domain 2 HPY13_07950 PF00005 ABC transporter HPY13_07955 PF01032 FecCD transport family HPY13_07960 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HPY13_07970 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HPY13_07975 PF02654 Cobalamin-5-phosphate synthase HPY13_07980 PF02277 Phosphoribosyltransferase HPY13_07985 PF01641 SelR domain HPY13_08005 PF13438 Domain of unknown function (DUF4113) HPY13_08005 PF11799 impB/mucB/samB family C-terminal domain HPY13_08005 PF00817 impB/mucB/samB family HPY13_08010 PF00717 Peptidase S24-like HPY13_08060 PF04984 Phage tail sheath protein subtilisin-like domain HPY13_08060 PF17482 Phage tail sheath C-terminal domain HPY13_08150 PF00959 Phage lysozyme HPY13_08245 PF14659 Phage integrase, N-terminal SAM-like domain HPY13_08245 PF00589 Phage integrase family HPY13_08245 PF13356 Arm DNA-binding domain HPY13_08250 PF08411 Exonuclease C-terminal HPY13_08250 PF00929 Exonuclease HPY13_08255 PF03788 LrgA family HPY13_08260 PF04172 LrgB-like family HPY13_08265 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HPY13_08265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY13_08275 PF02222 ATP-grasp domain HPY13_08280 PF05724 Thiopurine S-methyltransferase (TPMT) HPY13_08290 PF00216 Bacterial DNA-binding protein HPY13_08295 PF03483 B3/4 domain HPY13_08295 PF03484 tRNA synthetase B5 domain HPY13_08295 PF03147 Ferredoxin-fold anticodon binding domain HPY13_08295 PF01588 Putative tRNA binding domain HPY13_08295 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPY13_08300 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HPY13_08300 PF01409 tRNA synthetases class II core domain (F) HPY13_08310 PF00072 Response regulator receiver domain HPY13_08310 PF00990 Diguanylate cyclase, GGDEF domain HPY13_08335 PF01066 CDP-alcohol phosphatidyltransferase HPY13_08340 PF01541 GIY-YIG catalytic domain HPY13_08340 PF02151 UvrB/uvrC motif HPY13_08340 PF08459 UvrC Helix-hairpin-helix N-terminal HPY13_08345 PF00196 Bacterial regulatory proteins, luxR family HPY13_08345 PF00072 Response regulator receiver domain HPY13_08350 PF00136 DNA polymerase family B HPY13_08350 PF03104 DNA polymerase family B, exonuclease domain HPY13_08355 PF00563 EAL domain HPY13_08355 PF00990 Diguanylate cyclase, GGDEF domain HPY13_08355 PF13426 PAS domain HPY13_08365 PF08207 Elongation factor P (EF-P) KOW-like domain HPY13_08365 PF01132 Elongation factor P (EF-P) OB domain HPY13_08365 PF09285 Elongation factor P, C-terminal HPY13_08370 PF04269 Protein of unknown function, DUF440 HPY13_08380 PF07702 UTRA domain HPY13_08380 PF00392 Bacterial regulatory proteins, gntR family HPY13_08385 PF01979 Amidohydrolase family HPY13_08390 PF00491 Arginase family HPY13_08395 PF01175 Urocanase Rossmann-like domain HPY13_08395 PF17391 Urocanase N-terminal domain HPY13_08395 PF17392 Urocanase C-terminal domain HPY13_08400 PF00221 Aromatic amino acid lyase HPY13_08410 PF00089 Trypsin HPY13_08415 PF04191 Phospholipid methyltransferase HPY13_08420 PF13183 4Fe-4S dicluster domain HPY13_08420 PF01565 FAD binding domain HPY13_08420 PF02913 FAD linked oxidases, C-terminal domain HPY13_08435 PF00691 OmpA family HPY13_08435 PF13488 Glycine zipper HPY13_08455 PF01259 SAICAR synthetase HPY13_08465 PF03949 Malic enzyme, NAD binding domain HPY13_08465 PF00390 Malic enzyme, N-terminal domain HPY13_08475 PF02698 DUF218 domain HPY13_08480 PF08448 PAS fold HPY13_08480 PF00990 Diguanylate cyclase, GGDEF domain HPY13_08485 PF00266 Aminotransferase class-V HPY13_08495 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_08500 PF00664 ABC transporter transmembrane region HPY13_08500 PF00005 ABC transporter HPY13_08505 PF00664 ABC transporter transmembrane region HPY13_08505 PF00005 ABC transporter HPY13_08510 PF00849 RNA pseudouridylate synthase HPY13_08510 PF01479 S4 domain HPY13_08515 PF01300 Telomere recombination HPY13_08520 PF02811 PHP domain HPY13_08530 PF00425 chorismate binding enzyme HPY13_08530 PF04715 Anthranilate synthase component I, N terminal region HPY13_08535 PF00117 Glutamine amidotransferase class-I HPY13_08540 PF02885 Glycosyl transferase family, helical bundle domain HPY13_08540 PF00591 Glycosyl transferase family, a/b domain HPY13_08545 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HPY13_08545 PF00218 Indole-3-glycerol phosphate synthase HPY13_08550 PF00291 Pyridoxal-phosphate dependent enzyme HPY13_08555 PF00290 Tryptophan synthase alpha chain HPY13_08560 PF00375 Sodium:dicarboxylate symporter family HPY13_08565 PF00265 Thymidine kinase HPY13_08570 PF02938 GAD domain HPY13_08570 PF00152 tRNA synthetases class II (D, K and N) HPY13_08570 PF01336 OB-fold nucleic acid binding domain HPY13_08575 PF01904 Protein of unknown function DUF72 HPY13_08580 PF13649 Methyltransferase domain HPY13_08585 PF08003 Protein of unknown function (DUF1698) HPY13_08590 PF08443 RimK-like ATP-grasp domain HPY13_08590 PF18030 RimK PreATP-grasp domain HPY13_08605 PF00266 Aminotransferase class-V HPY13_08615 PF00512 His Kinase A (phospho-acceptor) domain HPY13_08615 PF00989 PAS fold HPY13_08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_08630 PF04993 TfoX N-terminal domain HPY13_08630 PF04994 TfoX C-terminal domain HPY13_08640 PF03956 Lysine exporter LysO HPY13_08650 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY13_08655 PF01418 Helix-turn-helix domain, rpiR family HPY13_08655 PF01380 SIS domain HPY13_08660 PF00465 Iron-containing alcohol dehydrogenase HPY13_08660 PF00171 Aldehyde dehydrogenase family HPY13_08665 PF00462 Glutaredoxin HPY13_08670 PF06826 Predicted Permease Membrane Region HPY13_08670 PF02080 TrkA-C domain HPY13_08675 PF10431 C-terminal, D2-small domain, of ClpB protein HPY13_08675 PF00004 ATPase family associated with various cellular activities (AAA) HPY13_08675 PF17871 AAA lid domain HPY13_08675 PF07724 AAA domain (Cdc48 subfamily) HPY13_08675 PF02861 Clp amino terminal domain, pathogenicity island component HPY13_08680 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPY13_08685 PF00313 'Cold-shock' DNA-binding domain HPY13_08690 PF03971 Monomeric isocitrate dehydrogenase HPY13_08695 PF00849 RNA pseudouridylate synthase HPY13_08700 PF01502 Phosphoribosyl-AMP cyclohydrolase HPY13_08700 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HPY13_08705 PF00977 Histidine biosynthesis protein HPY13_08710 PF00977 Histidine biosynthesis protein HPY13_08715 PF00117 Glutamine amidotransferase class-I HPY13_08720 PF00475 Imidazoleglycerol-phosphate dehydratase HPY13_08720 PF08645 Polynucleotide kinase 3 phosphatase HPY13_08725 PF00155 Aminotransferase class I and II HPY13_08730 PF00815 Histidinol dehydrogenase HPY13_08735 PF01634 ATP phosphoribosyltransferase HPY13_08735 PF08029 HisG, C-terminal domain HPY13_08740 PF03553 Na+/H+ antiporter family HPY13_08745 PF00816 H-NS histone family HPY13_08750 PF00294 pfkB family carbohydrate kinase HPY13_08760 PF04356 Protein of unknown function (DUF489) HPY13_08765 PF00206 Lyase HPY13_08765 PF08328 Adenylosuccinate lyase C-terminal HPY13_08775 PF16036 Chalcone isomerase-like HPY13_08800 PF00106 short chain dehydrogenase HPY13_08810 PF01435 Peptidase family M48 HPY13_08825 PF08241 Methyltransferase domain HPY13_08830 PF00155 Aminotransferase class I and II HPY13_08835 PF06968 Biotin and Thiamin Synthesis associated domain HPY13_08835 PF04055 Radical SAM superfamily HPY13_08840 PF00202 Aminotransferase class-III HPY13_08845 PF02403 Seryl-tRNA synthetase N-terminal domain HPY13_08845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY13_08850 PF16193 AAA C-terminal domain HPY13_08850 PF00004 ATPase family associated with various cellular activities (AAA) HPY13_08850 PF12002 MgsA AAA+ ATPase C terminal HPY13_08855 PF03548 Outer membrane lipoprotein carrier protein LolA HPY13_08860 PF07516 SecA Wing and Scaffold domain HPY13_08860 PF02810 SEC-C motif HPY13_08860 PF07517 SecA DEAD-like domain HPY13_08860 PF01043 SecA preprotein cross-linking domain HPY13_08865 PF01207 Dihydrouridine synthase (Dus) HPY13_08870 PF00990 Diguanylate cyclase, GGDEF domain HPY13_08875 PF00005 ABC transporter HPY13_08880 PF02653 Branched-chain amino acid transport system / permease component HPY13_08890 PF09905 DNA-binding protein VF530 HPY13_08895 PF04217 Protein of unknown function, DUF412 HPY13_08900 PF00871 Acetokinase family HPY13_08905 PF01515 Phosphate acetyl/butaryl transferase HPY13_08905 PF07085 DRTGG domain HPY13_08910 PF13409 Glutathione S-transferase, N-terminal domain HPY13_08915 PF00005 ABC transporter HPY13_08915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_08920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_08920 PF00005 ABC transporter HPY13_08925 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY13_08925 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_08930 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_08935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY13_08945 PF00072 Response regulator receiver domain HPY13_08945 PF13188 PAS domain HPY13_08945 PF08448 PAS fold HPY13_08945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_08945 PF00512 His Kinase A (phospho-acceptor) domain HPY13_08950 PF00158 Sigma-54 interaction domain HPY13_08950 PF00072 Response regulator receiver domain HPY13_08950 PF02954 Bacterial regulatory protein, Fis family HPY13_08955 PF03707 Bacterial signalling protein N terminal repeat HPY13_08955 PF00990 Diguanylate cyclase, GGDEF domain HPY13_08955 PF00563 EAL domain HPY13_08955 PF13188 PAS domain HPY13_08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_08960 PF00512 His Kinase A (phospho-acceptor) domain HPY13_08965 PF13188 PAS domain HPY13_08965 PF00512 His Kinase A (phospho-acceptor) domain HPY13_08965 PF13426 PAS domain HPY13_08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_08965 PF00989 PAS fold HPY13_08975 PF00072 Response regulator receiver domain HPY13_08990 PF01300 Telomere recombination HPY13_08990 PF03481 Putative GTP-binding controlling metal-binding HPY13_09005 PF01161 Phosphatidylethanolamine-binding protein HPY13_09015 PF06483 Chitinase C HPY13_09015 PF00704 Glycosyl hydrolases family 18 HPY13_09020 PF01116 Fructose-bisphosphate aldolase class-II HPY13_09025 PF01979 Amidohydrolase family HPY13_09030 PF03610 PTS system fructose IIA component HPY13_09035 PF03613 PTS system mannose/fructose/sorbose family IID component HPY13_09040 PF03609 PTS system sorbose-specific iic component HPY13_09045 PF03830 PTS system sorbose subfamily IIB component HPY13_09050 PF01380 SIS domain HPY13_09055 PF08013 Tagatose 6 phosphate kinase HPY13_09060 PF08220 DeoR-like helix-turn-helix domain HPY13_09060 PF00455 DeoR C terminal sensor domain HPY13_09065 PF08220 DeoR-like helix-turn-helix domain HPY13_09065 PF00455 DeoR C terminal sensor domain HPY13_09080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY13_09080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY13_09085 PF01022 Bacterial regulatory protein, arsR family HPY13_09095 PF00990 Diguanylate cyclase, GGDEF domain HPY13_09095 PF08448 PAS fold HPY13_09105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY13_09120 PF13404 AsnC-type helix-turn-helix domain HPY13_09120 PF01037 Lrp/AsnC ligand binding domain HPY13_09125 PF00291 Pyridoxal-phosphate dependent enzyme HPY13_09130 PF01343 Peptidase family S49 HPY13_09130 PF08496 Peptidase family S49 N-terminal HPY13_09135 PF00106 short chain dehydrogenase HPY13_09140 PF03692 Putative zinc- or iron-chelating domain HPY13_09145 PF03692 Putative zinc- or iron-chelating domain HPY13_09150 PF02132 RecR protein HPY13_09150 PF13662 Toprim domain HPY13_09155 PF02575 YbaB/EbfC DNA-binding family HPY13_09160 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HPY13_09160 PF12169 DNA polymerase III subunits gamma and tau domain III HPY13_09160 PF12170 DNA polymerase III tau subunit V interacting with alpha HPY13_09165 PF00156 Phosphoribosyl transferase domain HPY13_09170 PF04304 Protein of unknown function (DUF454) HPY13_09175 PF00072 Response regulator receiver domain HPY13_09180 PF03466 LysR substrate binding domain HPY13_09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_09185 PF00881 Nitroreductase family HPY13_09190 PF00378 Enoyl-CoA hydratase/isomerase HPY13_09190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY13_09190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY13_09195 PF00108 Thiolase, N-terminal domain HPY13_09195 PF02803 Thiolase, C-terminal domain HPY13_09200 PF04542 Sigma-70 region 2 HPY13_09200 PF08281 Sigma-70, region 4 HPY13_09210 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY13_09215 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY13_09220 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY13_09225 PF12557 Cob(I)alamin adenosyltransferase N terminal HPY13_09225 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HPY13_09230 PF05170 AsmA family HPY13_09235 PF00485 Phosphoribulokinase / Uridine kinase family HPY13_09240 PF10609 NUBPL iron-transfer P-loop NTPase HPY13_09245 PF09334 tRNA synthetases class I (M) HPY13_09245 PF01588 Putative tRNA binding domain HPY13_09260 PF01048 Phosphorylase superfamily HPY13_09265 PF00403 Heavy-metal-associated domain HPY13_09270 PF01743 Poly A polymerase head domain HPY13_09270 PF00571 CBS domain HPY13_09275 PF07694 5TMR of 5TMR-LYT HPY13_09275 PF00990 Diguanylate cyclase, GGDEF domain HPY13_09280 PF02391 MoaE protein HPY13_09285 PF02597 ThiS family HPY13_09290 PF01967 MoaC family HPY13_09295 PF00994 Probable molybdopterin binding domain HPY13_09300 PF06463 Molybdenum Cofactor Synthesis C HPY13_09300 PF04055 Radical SAM superfamily HPY13_09305 PF01933 Uncharacterised protein family UPF0052 HPY13_09310 PF01627 Hpt domain HPY13_09315 PF02954 Bacterial regulatory protein, Fis family HPY13_09315 PF00158 Sigma-54 interaction domain HPY13_09315 PF00072 Response regulator receiver domain HPY13_09320 PF12344 Ultra-violet resistance protein B HPY13_09320 PF02151 UvrB/uvrC motif HPY13_09320 PF04851 Type III restriction enzyme, res subunit HPY13_09320 PF00271 Helicase conserved C-terminal domain HPY13_09320 PF17757 UvrB interaction domain HPY13_09330 PF02508 Rnf-Nqr subunit, membrane protein HPY13_09335 PF04060 Putative Fe-S cluster HPY13_09340 PF13375 RnfC Barrel sandwich hybrid domain HPY13_09340 PF12838 4Fe-4S dicluster domain HPY13_09340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HPY13_09340 PF10531 SLBB domain HPY13_09345 PF03116 NQR2, RnfD, RnfE family HPY13_09350 PF04205 FMN-binding domain HPY13_09355 PF02508 Rnf-Nqr subunit, membrane protein HPY13_09360 PF10576 Iron-sulfur binding domain of endonuclease III HPY13_09360 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY13_09360 PF00633 Helix-hairpin-helix motif HPY13_09365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY13_09370 PF10952 Protein of unknown function (DUF2753) HPY13_09375 PF18393 MotY N-terminal domain HPY13_09375 PF00691 OmpA family HPY13_09380 PF00929 Exonuclease HPY13_09385 PF03553 Na+/H+ antiporter family HPY13_09385 PF13726 Na+-H+ antiporter family HPY13_09390 PF00156 Phosphoribosyl transferase domain HPY13_09395 PF02674 Colicin V production protein HPY13_09400 PF05036 Sporulation related domain HPY13_09405 PF08245 Mur ligase middle domain HPY13_09405 PF02875 Mur ligase family, glutamate ligase domain HPY13_09410 PF01039 Carboxyl transferase domain HPY13_09410 PF17848 Acetyl-coA carboxylase zinc finger domain HPY13_09415 PF01416 tRNA pseudouridine synthase HPY13_09425 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY13_09425 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HPY13_09430 PF02378 Phosphotransferase system, EIIC HPY13_09430 PF00367 phosphotransferase system, EIIB HPY13_09430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY13_09435 PF01979 Amidohydrolase family HPY13_09440 PF01047 MarR family HPY13_09440 PF00480 ROK family HPY13_09445 PF00999 Sodium/hydrogen exchanger family HPY13_09445 PF02254 TrkA-N domain HPY13_09450 PF13537 Glutamine amidotransferase domain HPY13_09450 PF00733 Asparagine synthase HPY13_09455 PF02357 Transcription termination factor nusG HPY13_09460 PF00854 POT family HPY13_09465 PF00762 Ferrochelatase HPY13_09470 PF05191 Adenylate kinase, active site lid HPY13_09475 PF00183 Hsp90 protein HPY13_09475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_09480 PF00486 Transcriptional regulatory protein, C terminal HPY13_09485 PF17323 Trans-membrane regulatory protein ToxS HPY13_09495 PF12850 Calcineurin-like phosphoesterase superfamily domain HPY13_09500 PF08338 Domain of unknown function (DUF1731) HPY13_09500 PF01370 NAD dependent epimerase/dehydratase family HPY13_09505 PF00106 short chain dehydrogenase HPY13_09510 PF00085 Thioredoxin HPY13_09515 PF01145 SPFH domain / Band 7 family HPY13_09515 PF16200 C-terminal region of band_7 HPY13_09520 PF01957 NfeD-like C-terminal, partner-binding HPY13_09525 PF13411 MerR HTH family regulatory protein HPY13_09530 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY13_09535 PF13609 Gram-negative porin HPY13_09540 PF01653 NAD-dependent DNA ligase adenylation domain HPY13_09540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HPY13_09540 PF03120 NAD-dependent DNA ligase OB-fold domain HPY13_09540 PF00533 BRCA1 C Terminus (BRCT) domain HPY13_09540 PF12826 Helix-hairpin-helix motif HPY13_09545 PF04354 ZipA, C-terminal FtsZ-binding domain HPY13_09555 PF00291 Pyridoxal-phosphate dependent enzyme HPY13_09560 PF00381 PTS HPr component phosphorylation site HPY13_09565 PF05524 PEP-utilising enzyme, N-terminal HPY13_09565 PF00391 PEP-utilising enzyme, mobile domain HPY13_09565 PF02896 PEP-utilising enzyme, TIM barrel domain HPY13_09570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY13_09575 PF01494 FAD binding domain HPY13_09580 PF04055 Radical SAM superfamily HPY13_09580 PF00919 Uncharacterized protein family UPF0004 HPY13_09580 PF01938 TRAM domain HPY13_09585 PF02562 PhoH-like protein HPY13_09590 PF02130 Uncharacterized protein family UPF0054 HPY13_09595 PF00571 CBS domain HPY13_09595 PF03471 Transporter associated domain HPY13_09600 PF00795 Carbon-nitrogen hydrolase HPY13_09610 PF08264 Anticodon-binding domain of tRNA HPY13_09610 PF00133 tRNA synthetases class I (I, L, M and V) HPY13_09610 PF13603 Leucyl-tRNA synthetase, Domain 2 HPY13_09615 PF04390 Lipopolysaccharide-assembly HPY13_09620 PF06144 DNA polymerase III, delta subunit HPY13_09620 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HPY13_09630 PF02590 Predicted SPOUT methyltransferase HPY13_09635 PF03717 Penicillin-binding Protein dimerisation domain HPY13_09635 PF00905 Penicillin binding protein transpeptidase domain HPY13_09640 PF01098 Cell cycle protein HPY13_09645 PF03330 Lytic transglycolase HPY13_09645 PF05036 Sporulation related domain HPY13_09650 PF07943 Penicillin-binding protein 5, C-terminal domain HPY13_09650 PF00768 D-alanyl-D-alanine carboxypeptidase HPY13_09655 PF04359 Protein of unknown function (DUF493) HPY13_09660 PF03099 Biotin/lipoate A/B protein ligase family HPY13_09665 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HPY13_09665 PF04055 Radical SAM superfamily HPY13_09675 PF00464 Serine hydroxymethyltransferase HPY13_09695 PF13614 AAA domain HPY13_09695 PF02706 Chain length determinant protein HPY13_09695 PF13807 G-rich domain on putative tyrosine kinase HPY13_09700 PF02563 Polysaccharide biosynthesis/export protein HPY13_09700 PF10531 SLBB domain HPY13_09700 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY13_09710 PF02397 Bacterial sugar transferase HPY13_09725 PF12561 ToxR activated gene A lipoprotein domain HPY13_09725 PF17945 Beta/Gamma crystallin HPY13_09740 PF03808 Glycosyl transferase WecB/TagA/CpsF family HPY13_09750 PF00534 Glycosyl transferases group 1 HPY13_09750 PF00862 Sucrose synthase HPY13_09760 PF00534 Glycosyl transferases group 1 HPY13_09760 PF13439 Glycosyltransferase Family 4 HPY13_09790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY13_09790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY13_09790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY13_09795 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY13_09800 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY13_09805 PF00873 AcrB/AcrD/AcrF family HPY13_09810 PF13533 Biotin-lipoyl like HPY13_09835 PF16657 Maltogenic Amylase, C-terminal domain HPY13_09835 PF00128 Alpha amylase, catalytic domain HPY13_09840 PF00367 phosphotransferase system, EIIB HPY13_09840 PF02378 Phosphotransferase system, EIIC HPY13_09845 PF00356 Bacterial regulatory proteins, lacI family HPY13_09855 PF00005 ABC transporter HPY13_09855 PF09383 NIL domain HPY13_09860 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_09865 PF03180 NLPA lipoprotein HPY13_09870 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HPY13_09875 PF07348 Syd protein (SUKH-2) HPY13_09880 PF14489 QueF-like protein HPY13_09880 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HPY13_09890 PF00990 Diguanylate cyclase, GGDEF domain HPY13_09895 PF03641 Possible lysine decarboxylase HPY13_09895 PF11892 Domain of unknown function (DUF3412) HPY13_09895 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HPY13_09900 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY13_09900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY13_09905 PF04241 Protein of unknown function (DUF423) HPY13_09910 PF03466 LysR substrate binding domain HPY13_09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_09915 PF02926 THUMP domain HPY13_09915 PF02568 Thiamine biosynthesis protein (ThiI) HPY13_09920 PF00691 OmpA family HPY13_09920 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPY13_09925 PF01618 MotA/TolQ/ExbB proton channel family HPY13_09930 PF02609 Exonuclease VII small subunit HPY13_09935 PF00348 Polyprenyl synthetase HPY13_09940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPY13_09940 PF02779 Transketolase, pyrimidine binding domain HPY13_09940 PF02780 Transketolase, C-terminal domain HPY13_09945 PF00849 RNA pseudouridylate synthase HPY13_09950 PF04287 tRNA pseudouridine synthase C HPY13_09965 PF13302 Acetyltransferase (GNAT) domain HPY13_09975 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HPY13_09980 PF03806 AbgT putative transporter family HPY13_09985 PF00444 Ribosomal protein L36 HPY13_09990 PF01197 Ribosomal protein L31 HPY13_09995 PF18389 TrmO C-terminal domain HPY13_09995 PF01980 tRNA-methyltransferase O HPY13_10000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY13_10000 PF04073 Aminoacyl-tRNA editing domain HPY13_10000 PF03129 Anticodon binding domain HPY13_10010 PF06786 Uncharacterised protein family (UPF0253) HPY13_10020 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HPY13_10020 PF02769 AIR synthase related protein, C-terminal domain HPY13_10020 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HPY13_10030 PF01464 Transglycosylase SLT domain HPY13_10030 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_10035 PF14437 MafB19-like deaminase HPY13_10040 PF03806 AbgT putative transporter family HPY13_10065 PF07963 Prokaryotic N-terminal methylation motif HPY13_10065 PF00114 Pilin (bacterial filament) HPY13_10070 PF00226 DnaJ domain HPY13_10070 PF01556 DnaJ C terminal domain HPY13_10070 PF00684 DnaJ central domain HPY13_10075 PF00012 Hsp70 protein HPY13_10080 PF01025 GrpE HPY13_10085 PF01513 ATP-NAD kinase HPY13_10090 PF02463 RecF/RecN/SMC N terminal domain HPY13_10095 PF04355 SmpA / OmlA family HPY13_10100 PF03658 RnfH family Ubiquitin HPY13_10105 PF03364 Polyketide cyclase / dehydrase and lipid transport HPY13_10110 PF01668 SmpB protein HPY13_10165 PF00037 4Fe-4S binding domain HPY13_10165 PF11953 Domain of unknown function (DUF3470) HPY13_10170 PF00588 SpoU rRNA Methylase family HPY13_10170 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY13_10180 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HPY13_10185 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HPY13_10190 PF04223 Citrate lyase, alpha subunit (CitF) HPY13_10195 PF03328 HpcH/HpaI aldolase/citrate lyase family HPY13_10200 PF06857 Malonate decarboxylase delta subunit (MdcD) HPY13_10205 PF08218 Citrate lyase ligase C-terminal domain HPY13_10210 PF03390 2-hydroxycarboxylate transporter family HPY13_10215 PF04277 Oxaloacetate decarboxylase, gamma chain HPY13_10220 PF00682 HMGL-like HPY13_10220 PF00364 Biotin-requiring enzyme HPY13_10220 PF02436 Conserved carboxylase domain HPY13_10225 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY13_10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_10230 PF17203 Single cache domain 3 HPY13_10235 PF00072 Response regulator receiver domain HPY13_10235 PF12431 Transcriptional regulator HPY13_10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_10250 PF03466 LysR substrate binding domain HPY13_10255 PF01266 FAD dependent oxidoreductase HPY13_10260 PF01235 Sodium:alanine symporter family HPY13_10265 PF01648 4'-phosphopantetheinyl transferase superfamily HPY13_10265 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HPY13_10270 PF00005 ABC transporter HPY13_10275 PF01032 FecCD transport family HPY13_10280 PF01032 FecCD transport family HPY13_10285 PF01497 Periplasmic binding protein HPY13_10300 PF00425 chorismate binding enzyme HPY13_10305 PF00501 AMP-binding enzyme HPY13_10305 PF13193 AMP-binding enzyme C-terminal domain HPY13_10310 PF00550 Phosphopantetheine attachment site HPY13_10310 PF00857 Isochorismatase family HPY13_10315 PF01184 GPR1/FUN34/yaaH family HPY13_10320 PF06483 Chitinase C HPY13_10320 PF00704 Glycosyl hydrolases family 18 HPY13_10325 PF02540 NAD synthase HPY13_10325 PF00958 GMP synthase C terminal domain HPY13_10325 PF00117 Glutamine amidotransferase class-I HPY13_10330 PF00571 CBS domain HPY13_10330 PF00478 IMP dehydrogenase / GMP reductase domain HPY13_10335 PF13742 OB-fold nucleic acid binding domain HPY13_10335 PF02601 Exonuclease VII, large subunit HPY13_10350 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPY13_10350 PF01926 50S ribosome-binding GTPase HPY13_10355 PF13360 PQQ-like domain HPY13_10360 PF09976 Tetratricopeptide repeat-like domain HPY13_10365 PF13393 Histidyl-tRNA synthetase HPY13_10365 PF03129 Anticodon binding domain HPY13_10370 PF04551 GcpE protein HPY13_10375 PF13464 Domain of unknown function (DUF4115) HPY13_10380 PF04055 Radical SAM superfamily HPY13_10385 PF00334 Nucleoside diphosphate kinase HPY13_10390 PF12404 Peptidase HPY13_10390 PF00883 Cytosol aminopeptidase family, catalytic domain HPY13_10395 PF04384 Iron-sulphur cluster assembly HPY13_10400 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY13_10405 PF00012 Hsp70 protein HPY13_10410 PF07743 HSCB C-terminal oligomerisation domain HPY13_10410 PF00226 DnaJ domain HPY13_10415 PF01521 Iron-sulphur cluster biosynthesis HPY13_10420 PF01592 NifU-like N terminal domain HPY13_10425 PF00266 Aminotransferase class-V HPY13_10430 PF02082 Transcriptional regulator HPY13_10435 PF00588 SpoU rRNA Methylase family HPY13_10440 PF00459 Inositol monophosphatase family HPY13_10445 PF02355 Protein export membrane protein HPY13_10445 PF07549 SecD/SecF GG Motif HPY13_10450 PF07549 SecD/SecF GG Motif HPY13_10450 PF02355 Protein export membrane protein HPY13_10450 PF13721 SecD export protein N-terminal TM region HPY13_10455 PF02699 Preprotein translocase subunit HPY13_10460 PF01702 Queuine tRNA-ribosyltransferase HPY13_10465 PF02547 Queuosine biosynthesis protein HPY13_10470 PF00571 CBS domain HPY13_10475 PF00463 Isocitrate lyase family HPY13_10480 PF01274 Malate synthase HPY13_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_10485 PF03466 LysR substrate binding domain HPY13_10490 PF10417 C-terminal domain of 1-Cys peroxiredoxin HPY13_10490 PF00578 AhpC/TSA family HPY13_10495 PF03932 CutC family HPY13_10500 PF03976 Polyphosphate kinase 2 (PPK2) HPY13_10505 PF01895 PhoU domain HPY13_10510 PF00005 ABC transporter HPY13_10515 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_10520 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_10525 PF02503 Polyphosphate kinase middle domain HPY13_10525 PF13089 Polyphosphate kinase N-terminal domain HPY13_10525 PF13090 Polyphosphate kinase C-terminal domain 2 HPY13_10525 PF17941 Polyphosphate kinase C-terminal domain 1 HPY13_10530 PF02541 Ppx/GppA phosphatase family HPY13_10535 PF12849 PBP superfamily domain HPY13_10540 PF11808 Phosphate regulon sensor protein PhoR HPY13_10540 PF00989 PAS fold HPY13_10540 PF00512 His Kinase A (phospho-acceptor) domain HPY13_10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_10545 PF00072 Response regulator receiver domain HPY13_10545 PF00486 Transcriptional regulatory protein, C terminal HPY13_10550 PF04381 Putative exonuclease, RdgC HPY13_10560 PF00037 4Fe-4S binding domain HPY13_10565 PF00881 Nitroreductase family HPY13_10605 PF17871 AAA lid domain HPY13_10605 PF02861 Clp amino terminal domain, pathogenicity island component HPY13_10605 PF07724 AAA domain (Cdc48 subfamily) HPY13_10605 PF00004 ATPase family associated with various cellular activities (AAA) HPY13_10605 PF10431 C-terminal, D2-small domain, of ClpB protein HPY13_10615 PF01479 S4 domain HPY13_10615 PF00849 RNA pseudouridylate synthase HPY13_10620 PF13525 Outer membrane lipoprotein HPY13_10625 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY13_10630 PF01817 Chorismate mutase type II HPY13_10630 PF00800 Prephenate dehydratase HPY13_10635 PF13416 Bacterial extracellular solute-binding protein HPY13_10640 PF00563 EAL domain HPY13_10640 PF00990 Diguanylate cyclase, GGDEF domain HPY13_10645 PF01931 Protein of unknown function DUF84 HPY13_10650 PF01371 Trp repressor protein HPY13_10655 PF01464 Transglycosylase SLT domain HPY13_10655 PF14718 Soluble lytic murein transglycosylase L domain HPY13_10660 PF12848 ABC transporter HPY13_10660 PF00005 ABC transporter HPY13_10665 PF07238 PilZ domain HPY13_10670 PF02153 Prephenate dehydrogenase HPY13_10670 PF01817 Chorismate mutase type II HPY13_10675 PF00793 DAHP synthetase I family HPY13_10680 PF06580 Histidine kinase HPY13_10680 PF07694 5TMR of 5TMR-LYT HPY13_10685 PF00072 Response regulator receiver domain HPY13_10685 PF04397 LytTr DNA-binding domain HPY13_10690 PF00933 Glycosyl hydrolase family 3 N terminal domain HPY13_10695 PF03702 Anhydro-N-acetylmuramic acid kinase HPY13_10700 PF13580 SIS domain HPY13_10715 PF02554 Carbon starvation protein CstA HPY13_10720 PF02401 LytB protein HPY13_10725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY13_10730 PF01252 Signal peptidase (SPase) II HPY13_10735 PF08264 Anticodon-binding domain of tRNA HPY13_10735 PF06827 Zinc finger found in FPG and IleRS HPY13_10735 PF00133 tRNA synthetases class I (I, L, M and V) HPY13_10740 PF06574 FAD synthetase HPY13_10740 PF01687 Riboflavin kinase HPY13_10745 PF03023 Lipid II flippase MurJ HPY13_10750 PF01649 Ribosomal protein S20 HPY13_10755 PF01022 Bacterial regulatory protein, arsR family HPY13_10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_10760 PF03466 LysR substrate binding domain HPY13_10765 PF02690 Na+/Pi-cotransporter HPY13_10770 PF00303 Thymidylate synthase HPY13_10775 PF01790 Prolipoprotein diacylglyceryl transferase HPY13_10780 PF01925 Sulfite exporter TauE/SafE HPY13_10785 PF02896 PEP-utilising enzyme, TIM barrel domain HPY13_10785 PF00391 PEP-utilising enzyme, mobile domain HPY13_10785 PF05524 PEP-utilising enzyme, N-terminal HPY13_10785 PF01590 GAF domain HPY13_10790 PF00293 NUDIX domain HPY13_10795 PF02976 DNA mismatch repair enzyme MutH HPY13_10800 PF00248 Aldo/keto reductase family HPY13_10810 PF02954 Bacterial regulatory protein, Fis family HPY13_10810 PF00072 Response regulator receiver domain HPY13_10810 PF00158 Sigma-54 interaction domain HPY13_10815 PF00152 tRNA synthetases class II (D, K and N) HPY13_10815 PF01336 OB-fold nucleic acid binding domain HPY13_10825 PF05525 Branched-chain amino acid transport protein HPY13_10830 PF05175 Methyltransferase small domain HPY13_10835 PF00271 Helicase conserved C-terminal domain HPY13_10835 PF00270 DEAD/DEAH box helicase HPY13_10840 PF03144 Elongation factor Tu domain 2 HPY13_10840 PF00009 Elongation factor Tu GTP binding domain HPY13_10840 PF16658 Class II release factor RF3, C-terminal domain HPY13_10845 PF03707 Bacterial signalling protein N terminal repeat HPY13_10845 PF00990 Diguanylate cyclase, GGDEF domain HPY13_10845 PF00563 EAL domain HPY13_10860 PF13508 Acetyltransferase (GNAT) domain HPY13_10865 PF02036 SCP-2 sterol transfer family HPY13_10870 PF03707 Bacterial signalling protein N terminal repeat HPY13_10870 PF00990 Diguanylate cyclase, GGDEF domain HPY13_10870 PF00563 EAL domain HPY13_10875 PF01136 Peptidase family U32 HPY13_10880 PF01136 Peptidase family U32 HPY13_10895 PF13181 Tetratricopeptide repeat HPY13_10895 PF07719 Tetratricopeptide repeat HPY13_10900 PF03725 3' exoribonuclease family, domain 2 HPY13_10900 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HPY13_10900 PF00575 S1 RNA binding domain HPY13_10900 PF00013 KH domain HPY13_10900 PF01138 3' exoribonuclease family, domain 1 HPY13_10905 PF00312 Ribosomal protein S15 HPY13_10910 PF01509 TruB family pseudouridylate synthase (N terminal domain) HPY13_10910 PF09157 Pseudouridine synthase II TruB, C-terminal HPY13_10910 PF16198 tRNA pseudouridylate synthase B C-terminal domain HPY13_10915 PF02033 Ribosome-binding factor A HPY13_10920 PF11987 Translation-initiation factor 2 HPY13_10920 PF08364 Bacterial translation initiation factor IF-2 associated region HPY13_10920 PF00009 Elongation factor Tu GTP binding domain HPY13_10920 PF04760 Translation initiation factor IF-2, N-terminal region HPY13_10925 PF08529 NusA N-terminal domain HPY13_10925 PF13184 NusA-like KH domain HPY13_10925 PF00575 S1 RNA binding domain HPY13_10930 PF17384 RimP C-terminal SH3 domain HPY13_10930 PF02576 RimP N-terminal domain HPY13_10945 PF03840 Preprotein translocase SecG subunit HPY13_10950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY13_10950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY13_10950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY13_10950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY13_10955 PF00809 Pterin binding enzyme HPY13_10960 PF17862 AAA+ lid domain HPY13_10960 PF01434 Peptidase family M41 HPY13_10960 PF06480 FtsH Extracellular HPY13_10960 PF00004 ATPase family associated with various cellular activities (AAA) HPY13_10965 PF01728 FtsJ-like methyltransferase HPY13_10970 PF01985 CRS1 / YhbY (CRM) domain HPY13_10975 PF03449 Transcription elongation factor, N-terminal HPY13_10975 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY13_10980 PF13609 Gram-negative porin HPY13_10985 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HPY13_10990 PF01479 S4 domain HPY13_10990 PF00579 tRNA synthetases class I (W and Y) HPY13_10995 PF04225 Opacity-associated protein A LysM-like domain HPY13_10995 PF01551 Peptidase family M23 HPY13_11000 PF00873 AcrB/AcrD/AcrF family HPY13_11010 PF01521 Iron-sulphur cluster biosynthesis HPY13_11015 PF00202 Aminotransferase class-III HPY13_11020 PF01594 AI-2E family transporter HPY13_11025 PF05175 Methyltransferase small domain HPY13_11025 PF08468 Methyltransferase small domain N-terminal HPY13_11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_11030 PF00512 His Kinase A (phospho-acceptor) domain HPY13_11030 PF09308 LuxQ, periplasmic HPY13_11030 PF00072 Response regulator receiver domain HPY13_11035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY13_11040 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_11045 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_11045 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY13_11055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_11055 PF00005 ABC transporter HPY13_11065 PF01869 BadF/BadG/BcrA/BcrD ATPase family HPY13_11070 PF02838 Glycosyl hydrolase family 20, domain 2 HPY13_11070 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY13_11075 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HPY13_11075 PF06165 Glycosyltransferase family 36 HPY13_11080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY13_11080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY13_11080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY13_11080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY13_11085 PF08402 TOBE domain HPY13_11085 PF00005 ABC transporter HPY13_11095 PF13416 Bacterial extracellular solute-binding protein HPY13_11100 PF00909 Ammonium Transporter Family HPY13_11105 PF00543 Nitrogen regulatory protein P-II HPY13_11110 PF06062 Uncharacterised protein family (UPF0231) HPY13_11115 PF11791 Aconitate B N-terminal domain HPY13_11115 PF00330 Aconitase family (aconitate hydratase) HPY13_11115 PF06434 Aconitate hydratase 2 N-terminus HPY13_11120 PF01734 Patatin-like phospholipase HPY13_11125 PF00912 Transglycosylase HPY13_11125 PF00905 Penicillin binding protein transpeptidase domain HPY13_11125 PF14814 Bifunctional transglycosylase second domain HPY13_11130 PF04408 Helicase associated domain (HA2) HPY13_11130 PF08482 ATP-dependent helicase C-terminal HPY13_11130 PF00270 DEAD/DEAH box helicase HPY13_11130 PF00271 Helicase conserved C-terminal domain HPY13_11140 PF17746 SfsA N-terminal OB domain HPY13_11140 PF03749 Sugar fermentation stimulation protein RE domain HPY13_11145 PF01258 Prokaryotic dksA/traR C4-type zinc finger HPY13_11150 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY13_11155 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY13_11155 PF01743 Poly A polymerase head domain HPY13_11155 PF12626 Polymerase A arginine-rich C-terminus HPY13_11160 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY13_11165 PF02548 Ketopantoate hydroxymethyltransferase HPY13_11170 PF02569 Pantoate-beta-alanine ligase HPY13_11175 PF01061 ABC-2 type transporter HPY13_11180 PF00005 ABC transporter HPY13_11185 PF01740 STAS domain HPY13_11185 PF00916 Sulfate permease family HPY13_11190 PF00484 Carbonic anhydrase HPY13_11195 PF00156 Phosphoribosyl transferase domain HPY13_11200 PF00440 Bacterial regulatory proteins, tetR family HPY13_11205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY13_11210 PF04348 LppC putative lipoprotein HPY13_11215 PF02021 Uncharacterised protein family UPF0102 HPY13_11220 PF13580 SIS domain HPY13_11225 PF04972 BON domain HPY13_11230 PF04386 Stringent starvation protein B HPY13_11235 PF02798 Glutathione S-transferase, N-terminal domain HPY13_11235 PF00043 Glutathione S-transferase, C-terminal domain HPY13_11240 PF02167 Cytochrome C1 family HPY13_11245 PF00033 Cytochrome b/b6/petB HPY13_11245 PF00032 Cytochrome b(C-terminal)/b6/petD HPY13_11250 PF00355 Rieske [2Fe-2S] domain HPY13_11250 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HPY13_11255 PF00380 Ribosomal protein S9/S16 HPY13_11260 PF00572 Ribosomal protein L13 HPY13_11265 PF03969 AFG1-like ATPase HPY13_11275 PF00595 PDZ domain HPY13_11280 PF13180 PDZ domain HPY13_11285 PF01245 Ribosomal protein L19 HPY13_11290 PF01746 tRNA (Guanine-1)-methyltransferase HPY13_11295 PF01782 RimM N-terminal domain HPY13_11295 PF05239 PRC-barrel domain HPY13_11300 PF00886 Ribosomal protein S16 HPY13_11305 PF02978 Signal peptide binding domain HPY13_11305 PF02881 SRP54-type protein, helical bundle domain HPY13_11305 PF00448 SRP54-type protein, GTPase domain HPY13_11310 PF01578 Cytochrome C assembly protein HPY13_11315 PF01595 Cyclin M transmembrane N-terminal domain HPY13_11315 PF03471 Transporter associated domain HPY13_11315 PF00571 CBS domain HPY13_11320 PF02664 S-Ribosylhomocysteinase (LuxS) HPY13_11325 PF04262 Glutamate-cysteine ligase HPY13_11330 PF00675 Insulinase (Peptidase family M16) HPY13_11330 PF05193 Peptidase M16 inactive domain HPY13_11335 PF09335 SNARE associated Golgi protein HPY13_11345 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY13_11350 PF00364 Biotin-requiring enzyme HPY13_11350 PF00682 HMGL-like HPY13_11350 PF02436 Conserved carboxylase domain HPY13_11355 PF04277 Oxaloacetate decarboxylase, gamma chain HPY13_11400 PF02599 Global regulator protein family HPY13_11405 PF01842 ACT domain HPY13_11405 PF13840 ACT domain HPY13_11405 PF00696 Amino acid kinase family HPY13_11410 PF02272 DHHA1 domain HPY13_11410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY13_11410 PF01411 tRNA synthetases class II (A) HPY13_11415 PF02631 RecX family HPY13_11420 PF00154 recA bacterial DNA recombination protein HPY13_11425 PF02464 Competence-damaged protein HPY13_11430 PF00005 ABC transporter HPY13_11430 PF12857 TOBE-like domain HPY13_11435 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_11440 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_11450 PF00291 Pyridoxal-phosphate dependent enzyme HPY13_11455 PF00488 MutS domain V HPY13_11455 PF05190 MutS family domain IV HPY13_11455 PF05192 MutS domain III HPY13_11455 PF05188 MutS domain II HPY13_11455 PF01624 MutS domain I HPY13_11460 PF04542 Sigma-70 region 2 HPY13_11460 PF00140 Sigma-70 factor, region 1.2 HPY13_11460 PF04539 Sigma-70 region 3 HPY13_11460 PF04545 Sigma-70, region 4 HPY13_11465 PF01551 Peptidase family M23 HPY13_11465 PF01476 LysM domain HPY13_11475 PF01975 Survival protein SurE HPY13_11480 PF01142 tRNA pseudouridine synthase D (TruD) HPY13_11485 PF02542 YgbB family HPY13_11490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPY13_11495 PF04977 Septum formation initiator HPY13_11500 PF02673 Bacitracin resistance protein BacA HPY13_11505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY13_11510 PF02152 Dihydroneopterin aldolase HPY13_11515 PF02660 Glycerol-3-phosphate acyltransferase HPY13_11520 PF00561 alpha/beta hydrolase fold HPY13_11525 PF00814 Glycoprotease family HPY13_11530 PF01165 Ribosomal protein S21 HPY13_11535 PF09424 Yqey-like protein HPY13_11540 PF08278 DNA primase DnaG DnaB-binding HPY13_11540 PF08275 DNA primase catalytic core, N-terminal domain HPY13_11540 PF10410 DnaB-helicase binding domain of primase HPY13_11540 PF01807 CHC2 zinc finger HPY13_11545 PF04545 Sigma-70, region 4 HPY13_11545 PF04539 Sigma-70 region 3 HPY13_11545 PF04542 Sigma-70 region 2 HPY13_11545 PF03979 Sigma-70 factor, region 1.1 HPY13_11545 PF04546 Sigma-70, non-essential region HPY13_11545 PF00140 Sigma-70 factor, region 1.2 HPY13_11560 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY13_11565 PF01380 SIS domain HPY13_11570 PF08220 DeoR-like helix-turn-helix domain HPY13_11570 PF00455 DeoR C terminal sensor domain HPY13_11575 PF00224 Pyruvate kinase, barrel domain HPY13_11575 PF02887 Pyruvate kinase, alpha/beta domain HPY13_11580 PF04402 Protein of unknown function (DUF541) HPY13_11585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_11585 PF03466 LysR substrate binding domain HPY13_11590 PF01810 LysE type translocator HPY13_11595 PF00924 Mechanosensitive ion channel HPY13_11595 PF05552 Conserved TM helix HPY13_11600 PF01116 Fructose-bisphosphate aldolase class-II HPY13_11605 PF00162 Phosphoglycerate kinase HPY13_11610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY13_11610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY13_11615 PF07715 TonB-dependent Receptor Plug Domain HPY13_11615 PF00593 TonB dependent receptor HPY13_11620 PF03466 LysR substrate binding domain HPY13_11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_11625 PF00456 Transketolase, thiamine diphosphate binding domain HPY13_11625 PF02779 Transketolase, pyrimidine binding domain HPY13_11625 PF02780 Transketolase, C-terminal domain HPY13_11630 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPY13_11630 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPY13_11630 PF02772 S-adenosylmethionine synthetase, central domain HPY13_11635 PF17283 SprT-like zinc ribbon domain HPY13_11635 PF10263 SprT-like family HPY13_11640 PF04231 Endonuclease I HPY13_11645 PF04452 RNA methyltransferase HPY13_11650 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HPY13_11650 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HPY13_11655 PF02622 Uncharacterized ACR, COG1678 HPY13_11660 PF03652 Holliday junction resolvase HPY13_11665 PF01479 S4 domain HPY13_11665 PF00579 tRNA synthetases class I (W and Y) HPY13_11675 PF00437 Type II/IV secretion system protein HPY13_11680 PF00437 Type II/IV secretion system protein HPY13_11685 PF01168 Alanine racemase, N-terminal domain HPY13_11690 PF03807 NADP oxidoreductase coenzyme F420-dependent HPY13_11690 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPY13_11695 PF02325 YGGT family HPY13_11700 PF02594 Uncharacterised ACR, YggU family COG1872 HPY13_11710 PF01725 Ham1 family HPY13_11715 PF04055 Radical SAM superfamily HPY13_11715 PF06969 HemN C-terminal domain HPY13_11720 PF04960 Glutaminase HPY13_11725 PF02390 Putative methyltransferase HPY13_11730 PF10576 Iron-sulfur binding domain of endonuclease III HPY13_11730 PF14815 NUDIX domain HPY13_11730 PF00633 Helix-hairpin-helix motif HPY13_11730 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY13_11735 PF04362 Bacterial Fe(2+) trafficking HPY13_11740 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HPY13_11740 PF01464 Transglycosylase SLT domain HPY13_11765 PF12729 Four helix bundle sensory module for signal transduction HPY13_11765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_11765 PF00672 HAMP domain HPY13_11795 PF05099 Tellurite resistance protein TerB HPY13_11795 PF00226 DnaJ domain HPY13_11800 PF03968 OstA-like protein HPY13_11800 PF04453 LPS transport system D HPY13_11805 PF09312 SurA N-terminal domain HPY13_11810 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HPY13_11815 PF00398 Ribosomal RNA adenine dimethylase HPY13_11820 PF04379 ApaG domain HPY13_11825 PF00149 Calcineurin-like phosphoesterase HPY13_11830 PF00186 Dihydrofolate reductase HPY13_11835 PF12821 Threonine/Serine exporter, ThrE HPY13_11840 PF06738 Putative threonine/serine exporter HPY13_11845 PF01926 50S ribosome-binding GTPase HPY13_11845 PF01018 GTP1/OBG HPY13_11850 PF01016 Ribosomal L27 protein HPY13_11855 PF00829 Ribosomal prokaryotic L21 protein HPY13_11860 PF00348 Polyprenyl synthetase HPY13_11865 PF13520 Amino acid permease HPY13_11870 PF00056 lactate/malate dehydrogenase, NAD binding domain HPY13_11870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HPY13_11875 PF02863 Arginine repressor, C-terminal domain HPY13_11875 PF01316 Arginine repressor, DNA binding domain HPY13_11880 PF16868 NMT1-like family HPY13_11890 PF00582 Universal stress protein family HPY13_11905 PF06877 Regulator of ribonuclease activity B HPY13_11915 PF01523 Putative modulator of DNA gyrase HPY13_11920 PF00795 Carbon-nitrogen hydrolase HPY13_11925 PF13116 Protein of unknown function HPY13_11925 PF13502 AsmA-like C-terminal region HPY13_11930 PF00575 S1 RNA binding domain HPY13_11930 PF10150 Ribonuclease E/G family HPY13_11935 PF02545 Maf-like protein HPY13_11940 PF04093 rod shape-determining protein MreD HPY13_11945 PF04085 rod shape-determining protein MreC HPY13_11980 PF00114 Pilin (bacterial filament) HPY13_11980 PF07963 Prokaryotic N-terminal methylation motif HPY13_11985 PF07963 Prokaryotic N-terminal methylation motif HPY13_11985 PF00114 Pilin (bacterial filament) HPY13_11995 PF00482 Type II secretion system (T2SS), protein F HPY13_12000 PF00437 Type II/IV secretion system protein HPY13_12010 PF13401 AAA domain HPY13_12010 PF01471 Putative peptidoglycan binding domain HPY13_12015 PF07660 Secretin and TonB N terminus short domain HPY13_12015 PF03958 Bacterial type II/III secretion system short domain HPY13_12015 PF00263 Bacterial type II and III secretion system protein HPY13_12015 PF11741 AMIN domain HPY13_12035 PF00563 EAL domain HPY13_12035 PF17157 Gammaproteobacterial periplasmic sensor domain HPY13_12035 PF00990 Diguanylate cyclase, GGDEF domain HPY13_12040 PF00436 Single-strand binding protein family HPY13_12045 PF00196 Bacterial regulatory proteins, luxR family HPY13_12050 PF00483 Nucleotidyl transferase HPY13_12055 PF17760 UvrA interaction domain HPY13_12055 PF17755 UvrA DNA-binding domain HPY13_12055 PF00005 ABC transporter HPY13_12065 PF00266 Aminotransferase class-V HPY13_12070 PF01842 ACT domain HPY13_12070 PF00696 Amino acid kinase family HPY13_12075 PF00809 Pterin binding enzyme HPY13_12075 PF02965 Vitamin B12 dependent methionine synthase, activation domain HPY13_12075 PF02607 B12 binding domain HPY13_12075 PF02310 B12 binding domain HPY13_12075 PF02574 Homocysteine S-methyltransferase HPY13_12080 PF00999 Sodium/hydrogen exchanger family HPY13_12145 PF01507 Phosphoadenosine phosphosulfate reductase family HPY13_12150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HPY13_12150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HPY13_12155 PF00667 FAD binding domain HPY13_12155 PF00258 Flavodoxin HPY13_12155 PF00175 Oxidoreductase NAD-binding domain HPY13_12175 PF09583 Phage shock protein G (Phageshock_PspG) HPY13_12180 PF01207 Dihydrouridine synthase (Dus) HPY13_12185 PF01475 Ferric uptake regulator family HPY13_12195 PF12706 Beta-lactamase superfamily domain HPY13_12200 PF00342 Phosphoglucose isomerase HPY13_12205 PF01894 Uncharacterised protein family UPF0047 HPY13_12210 PF00842 Alanine racemase, C-terminal domain HPY13_12210 PF01168 Alanine racemase, N-terminal domain HPY13_12215 PF00772 DnaB-like helicase N terminal domain HPY13_12215 PF03796 DnaB-like helicase C terminal domain HPY13_12225 PF03948 Ribosomal protein L9, C-terminal domain HPY13_12225 PF01281 Ribosomal protein L9, N-terminal domain HPY13_12230 PF01084 Ribosomal protein S18 HPY13_12235 PF00436 Single-strand binding protein family HPY13_12240 PF01250 Ribosomal protein S6 HPY13_12245 PF00210 Ferritin-like domain HPY13_12250 PF04324 BFD-like [2Fe-2S] binding domain HPY13_12255 PF00009 Elongation factor Tu GTP binding domain HPY13_12255 PF03144 Elongation factor Tu domain 2 HPY13_12255 PF03143 Elongation factor Tu C-terminal domain HPY13_12260 PF14492 Elongation Factor G, domain II HPY13_12260 PF03764 Elongation factor G, domain IV HPY13_12260 PF00009 Elongation factor Tu GTP binding domain HPY13_12260 PF03144 Elongation factor Tu domain 2 HPY13_12260 PF00679 Elongation factor G C-terminus HPY13_12265 PF00177 Ribosomal protein S7p/S5e HPY13_12270 PF00164 Ribosomal protein S12/S23 HPY13_12280 PF02635 DsrE/DsrF-like family HPY13_12285 PF02635 DsrE/DsrF-like family HPY13_12290 PF08348 YheO-like PAS domain HPY13_12290 PF13309 HTH domain HPY13_12295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY13_12295 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY13_12305 PF04102 SlyX HPY13_12310 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HPY13_12315 PF01145 SPFH domain / Band 7 family HPY13_12320 PF01145 SPFH domain / Band 7 family HPY13_12320 PF12221 Bacterial membrane protein N terminal HPY13_12325 PF16360 GTP-binding GTPase Middle Region HPY13_12325 PF01926 50S ribosome-binding GTPase HPY13_12325 PF13167 GTP-binding GTPase N-terminal HPY13_12330 PF17209 Hfq protein HPY13_12340 PF01119 DNA mismatch repair protein, C-terminal domain HPY13_12340 PF08676 MutL C terminal dimerisation domain HPY13_12345 PF01520 N-acetylmuramoyl-L-alanine amidase HPY13_12350 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HPY13_12355 PF08331 Domain of unknown function (DUF1730) HPY13_12405 PF00929 Exonuclease HPY13_12410 PF03193 RsgA GTPase HPY13_12415 PF02666 Phosphatidylserine decarboxylase HPY13_12420 PF00939 Sodium:sulfate symporter transmembrane region HPY13_12430 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HPY13_12430 PF01676 Metalloenzyme superfamily HPY13_12435 PF01551 Peptidase family M23 HPY13_12445 PF08360 QacR-like protein, C-terminal region HPY13_12445 PF00440 Bacterial regulatory proteins, tetR family HPY13_12450 PF01208 Uroporphyrinogen decarboxylase (URO-D) HPY13_12455 PF00293 NUDIX domain HPY13_12455 PF09297 NADH pyrophosphatase zinc ribbon domain HPY13_12460 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HPY13_12470 PF04998 RNA polymerase Rpb1, domain 5 HPY13_12470 PF05000 RNA polymerase Rpb1, domain 4 HPY13_12470 PF04983 RNA polymerase Rpb1, domain 3 HPY13_12470 PF00623 RNA polymerase Rpb1, domain 2 HPY13_12470 PF04997 RNA polymerase Rpb1, domain 1 HPY13_12475 PF04560 RNA polymerase Rpb2, domain 7 HPY13_12475 PF04561 RNA polymerase Rpb2, domain 2 HPY13_12475 PF10385 RNA polymerase beta subunit external 1 domain HPY13_12475 PF04565 RNA polymerase Rpb2, domain 3 HPY13_12475 PF04563 RNA polymerase beta subunit HPY13_12475 PF00562 RNA polymerase Rpb2, domain 6 HPY13_12480 PF00542 Ribosomal protein L7/L12 C-terminal domain HPY13_12480 PF16320 Ribosomal protein L7/L12 dimerisation domain HPY13_12485 PF00466 Ribosomal protein L10 HPY13_12490 PF00687 Ribosomal protein L1p/L10e family HPY13_12495 PF03946 Ribosomal protein L11, N-terminal domain HPY13_12495 PF00298 Ribosomal protein L11, RNA binding domain HPY13_12500 PF00467 KOW motif HPY13_12500 PF02357 Transcription termination factor nusG HPY13_12505 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HPY13_12510 PF03143 Elongation factor Tu C-terminal domain HPY13_12510 PF03144 Elongation factor Tu domain 2 HPY13_12510 PF00009 Elongation factor Tu GTP binding domain HPY13_12535 PF00485 Phosphoribulokinase / Uridine kinase family HPY13_12540 PF08279 HTH domain HPY13_12540 PF03099 Biotin/lipoate A/B protein ligase family HPY13_12540 PF02237 Biotin protein ligase C terminal domain HPY13_12545 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPY13_12545 PF01565 FAD binding domain HPY13_12555 PF13091 PLD-like domain HPY13_12590 PF00175 Oxidoreductase NAD-binding domain HPY13_12595 PF00175 Oxidoreductase NAD-binding domain HPY13_12595 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY13_12595 PF00970 Oxidoreductase FAD-binding domain HPY13_12600 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HPY13_12610 PF07498 Rho termination factor, N-terminal domain HPY13_12610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY13_12610 PF07497 Rho termination factor, RNA-binding domain HPY13_12615 PF00085 Thioredoxin HPY13_12620 PF00270 DEAD/DEAH box helicase HPY13_12620 PF00271 Helicase conserved C-terminal domain HPY13_12625 PF02541 Ppx/GppA phosphatase family HPY13_12630 PF00512 His Kinase A (phospho-acceptor) domain HPY13_12630 PF00072 Response regulator receiver domain HPY13_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_12630 PF09456 RcsC Alpha-Beta-Loop (ABL) HPY13_12635 PF12832 MFS_1 like family HPY13_12650 PF13193 AMP-binding enzyme C-terminal domain HPY13_12650 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY13_12650 PF00501 AMP-binding enzyme HPY13_12655 PF01220 Dehydroquinase class II HPY13_12660 PF00364 Biotin-requiring enzyme HPY13_12665 PF00289 Biotin carboxylase, N-terminal domain HPY13_12665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY13_12665 PF02785 Biotin carboxylase C-terminal domain HPY13_12675 PF01207 Dihydrouridine synthase (Dus) HPY13_12680 PF02954 Bacterial regulatory protein, Fis family HPY13_12685 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY13_12685 PF00356 Bacterial regulatory proteins, lacI family HPY13_12690 PF11647 Membrane Localization Domain HPY13_12700 PF00920 Dehydratase family HPY13_12705 PF01202 Shikimate kinase HPY13_12710 PF02447 GntP family permease HPY13_12715 PF01081 KDPG and KHG aldolase HPY13_12720 PF07715 TonB-dependent Receptor Plug Domain HPY13_12720 PF00593 TonB dependent receptor HPY13_12735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_12735 PF17200 Single Cache domain 2 HPY13_12735 PF00672 HAMP domain HPY13_12740 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY13_12740 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY13_12740 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY13_12745 PF13520 Amino acid permease HPY13_12750 PF18500 CadC C-terminal domain 1 HPY13_12750 PF00486 Transcriptional regulatory protein, C terminal HPY13_12755 PF13411 MerR HTH family regulatory protein HPY13_12765 PF01808 AICARFT/IMPCHase bienzyme HPY13_12765 PF02142 MGS-like domain HPY13_12770 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPY13_12770 PF02843 Phosphoribosylglycinamide synthetase, C domain HPY13_12770 PF02844 Phosphoribosylglycinamide synthetase, N domain HPY13_12780 PF00216 Bacterial DNA-binding protein HPY13_12785 PF01595 Cyclin M transmembrane N-terminal domain HPY13_12785 PF00571 CBS domain HPY13_12810 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HPY13_12820 PF06082 Exopolysaccharide biosynthesis protein YbjH HPY13_12825 PF04222 Protein of unknown function (DUF416) HPY13_12830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY13_12835 PF03167 Uracil DNA glycosylase superfamily HPY13_12840 PF00924 Mechanosensitive ion channel HPY13_12845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HPY13_12845 PF00753 Metallo-beta-lactamase superfamily HPY13_12845 PF10996 Beta-Casp domain HPY13_12850 PF02719 Polysaccharide biosynthesis protein HPY13_12855 PF02397 Bacterial sugar transferase HPY13_12860 PF01370 NAD dependent epimerase/dehydratase family HPY13_12910 PF00117 Glutamine amidotransferase class-I HPY13_12915 PF06508 Queuosine biosynthesis protein QueC HPY13_12920 PF03102 NeuB family HPY13_12920 PF08666 SAF domain HPY13_12930 PF02348 Cytidylyltransferase HPY13_12935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPY13_12940 PF02719 Polysaccharide biosynthesis protein HPY13_12945 PF02348 Cytidylyltransferase HPY13_12955 PF07836 DmpG-like communication domain HPY13_12955 PF00682 HMGL-like HPY13_12965 PF02706 Chain length determinant protein HPY13_12970 PF01370 NAD dependent epimerase/dehydratase family HPY13_12975 PF01522 Polysaccharide deacetylase HPY13_12975 PF00457 Glycosyl hydrolases family 11 HPY13_12985 PF01797 Transposase IS200 like HPY13_13000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY13_13005 PF04488 Glycosyltransferase sugar-binding region containing DXD motif HPY13_13010 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HPY13_13035 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_13040 PF01757 Acyltransferase family HPY13_13050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY13_13055 PF00535 Glycosyl transferase family 2 HPY13_13060 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY13_13065 PF01467 Cytidylyltransferase-like HPY13_13070 PF06827 Zinc finger found in FPG and IleRS HPY13_13070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HPY13_13070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HPY13_13080 PF00471 Ribosomal protein L33 HPY13_13085 PF00830 Ribosomal L28 family HPY13_13090 PF04002 RadC-like JAB domain HPY13_13095 PF00672 HAMP domain HPY13_13095 PF02743 Cache domain HPY13_13095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_13100 PF04127 DNA / pantothenate metabolism flavoprotein HPY13_13100 PF02441 Flavoprotein HPY13_13110 PF00440 Bacterial regulatory proteins, tetR family HPY13_13115 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY13_13120 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY13_13125 PF00156 Phosphoribosyl transferase domain HPY13_13130 PF01138 3' exoribonuclease family, domain 1 HPY13_13130 PF03725 3' exoribonuclease family, domain 2 HPY13_13135 PF08340 Domain of unknown function (DUF1732) HPY13_13135 PF03755 YicC-like family, N-terminal region HPY13_13140 PF03350 Uncharacterized protein family, UPF0114 HPY13_13145 PF02378 Phosphotransferase system, EIIC HPY13_13145 PF00367 phosphotransferase system, EIIB HPY13_13150 PF13580 SIS domain HPY13_13155 PF01380 SIS domain HPY13_13155 PF01418 Helix-turn-helix domain, rpiR family HPY13_13165 PF00271 Helicase conserved C-terminal domain HPY13_13165 PF00270 DEAD/DEAH box helicase HPY13_13165 PF00570 HRDC domain HPY13_13165 PF16124 RecQ zinc-binding HPY13_13165 PF09382 RQC domain HPY13_13170 PF00892 EamA-like transporter family HPY13_13180 PF12833 Helix-turn-helix domain HPY13_13185 PF01810 LysE type translocator HPY13_13190 PF00580 UvrD/REP helicase N-terminal domain HPY13_13190 PF13361 UvrD-like helicase C-terminal domain HPY13_13195 PF01432 Peptidase family M3 HPY13_13200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HPY13_13205 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_13205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY13_13215 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_13215 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY13_13225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY13_13230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_13230 PF00005 ABC transporter HPY13_13265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY13_13270 PF00580 UvrD/REP helicase N-terminal domain HPY13_13270 PF13361 UvrD-like helicase C-terminal domain HPY13_13275 PF00440 Bacterial regulatory proteins, tetR family HPY13_13280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY13_13285 PF00873 AcrB/AcrD/AcrF family HPY13_13290 PF04380 Membrane fusogenic activity HPY13_13295 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HPY13_13295 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HPY13_13300 PF03466 LysR substrate binding domain HPY13_13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_13370 PF12724 Flavodoxin domain HPY13_13375 PF02386 Cation transport protein HPY13_13380 PF01205 Uncharacterized protein family UPF0029 HPY13_13380 PF09186 Domain of unknown function (DUF1949) HPY13_13385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY13_13385 PF00378 Enoyl-CoA hydratase/isomerase HPY13_13385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY13_13390 PF02803 Thiolase, C-terminal domain HPY13_13390 PF00108 Thiolase, N-terminal domain HPY13_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_13395 PF03466 LysR substrate binding domain HPY13_13400 PF07690 Major Facilitator Superfamily HPY13_13405 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_13405 PF12804 MobA-like NTP transferase domain HPY13_13410 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HPY13_13410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HPY13_13415 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY13_13415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY13_13420 PF00231 ATP synthase HPY13_13425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY13_13425 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY13_13425 PF00306 ATP synthase alpha/beta chain, C terminal domain HPY13_13430 PF00213 ATP synthase delta (OSCP) subunit HPY13_13435 PF00430 ATP synthase B/B' CF(0) HPY13_13440 PF00137 ATP synthase subunit C HPY13_13445 PF00119 ATP synthase A chain HPY13_13450 PF03899 ATP synthase I chain HPY13_13455 PF17762 HTH domain found in ParB protein HPY13_13455 PF02195 ParB-like nuclease domain HPY13_13460 PF13614 AAA domain HPY13_13465 PF02527 rRNA small subunit methyltransferase G HPY13_13470 PF13932 GidA associated domain HPY13_13470 PF01134 Glucose inhibited division protein A HPY13_13480 PF12631 MnmE helical domain HPY13_13480 PF10396 GTP-binding protein TrmE N-terminus HPY13_13480 PF01926 50S ribosome-binding GTPase HPY13_13485 PF02096 60Kd inner membrane protein HPY13_13485 PF14849 YidC periplasmic domain HPY13_13490 PF01809 Putative membrane protein insertion efficiency factor HPY13_13495 PF00825 Ribonuclease P HPY13_13500 PF00468 Ribosomal protein L34 HPY13_13505 PF00005 ABC transporter HPY13_13510 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_13515 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_13520 PF08775 ParB family HPY13_13520 PF02195 ParB-like nuclease domain HPY13_13525 PF13614 AAA domain HPY13_13525 PF18607 ParA helix turn helix domain HPY13_13550 PF01709 Transcriptional regulator HPY13_13555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HPY13_13555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY13_13560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_13560 PF00672 HAMP domain HPY13_13560 PF17200 Single Cache domain 2 HPY13_13565 PF10928 Protein of unknown function (DUF2810) HPY13_13570 PF17874 MalT-like TPR region HPY13_13570 PF00196 Bacterial regulatory proteins, luxR family HPY13_13575 PF00343 Carbohydrate phosphorylase HPY13_13580 PF02446 4-alpha-glucanotransferase HPY13_13585 PF02806 Alpha amylase, C-terminal all-beta domain HPY13_13585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY13_13585 PF00128 Alpha amylase, catalytic domain HPY13_13590 PF05638 Type VI secretion system effector, Hcp HPY13_13595 PF04717 Type VI secretion system, phage-baseplate injector HPY13_13595 PF16671 Actin cross-linking domain HPY13_13620 PF01168 Alanine racemase, N-terminal domain HPY13_13620 PF01757 Acyltransferase family HPY13_13620 PF00842 Alanine racemase, C-terminal domain HPY13_13630 PF00939 Sodium:sulfate symporter transmembrane region HPY13_13635 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY13_13640 PF08329 Chitinase A, N-terminal domain HPY13_13640 PF00704 Glycosyl hydrolases family 18 HPY13_13660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_13660 PF00672 HAMP domain HPY13_13660 PF02743 Cache domain HPY13_13680 PF01569 PAP2 superfamily HPY13_13685 PF00375 Sodium:dicarboxylate symporter family HPY13_13695 PF02630 SCO1/SenC HPY13_13710 PF03616 Sodium/glutamate symporter HPY13_13715 PF12945 Flagellar protein YcgR HPY13_13715 PF07238 PilZ domain HPY13_13730 PF00990 Diguanylate cyclase, GGDEF domain HPY13_13745 PF01048 Phosphorylase superfamily HPY13_13750 PF08349 Protein of unknown function (DUF1722) HPY13_13755 PF13411 MerR HTH family regulatory protein HPY13_13760 PF03441 FAD binding domain of DNA photolyase HPY13_13760 PF00875 DNA photolyase HPY13_13765 PF17969 L,D-transpeptidase C-terminal domain HPY13_13765 PF01476 LysM domain HPY13_13765 PF03734 L,D-transpeptidase catalytic domain HPY13_13775 PF00270 DEAD/DEAH box helicase HPY13_13775 PF00271 Helicase conserved C-terminal domain HPY13_13780 PF00326 Prolyl oligopeptidase family HPY13_13780 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HPY13_13785 PF07715 TonB-dependent Receptor Plug Domain HPY13_13785 PF00593 TonB dependent receptor HPY13_13805 PF00672 HAMP domain HPY13_13805 PF12729 Four helix bundle sensory module for signal transduction HPY13_13805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_13810 PF12849 PBP superfamily domain HPY13_13815 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_13820 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_13825 PF00005 ABC transporter HPY13_13830 PF03707 Bacterial signalling protein N terminal repeat HPY13_13830 PF00563 EAL domain HPY13_13830 PF00990 Diguanylate cyclase, GGDEF domain HPY13_13850 PF00916 Sulfate permease family HPY13_13850 PF01740 STAS domain HPY13_13860 PF08525 Opacity-associated protein A N-terminal motif HPY13_13860 PF01476 LysM domain HPY13_13860 PF01551 Peptidase family M23 HPY13_13865 PF00990 Diguanylate cyclase, GGDEF domain HPY13_13865 PF00563 EAL domain HPY13_13865 PF13188 PAS domain HPY13_13865 PF03707 Bacterial signalling protein N terminal repeat HPY13_13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_13870 PF03466 LysR substrate binding domain HPY13_13875 PF07690 Major Facilitator Superfamily HPY13_13880 PF09278 MerR, DNA binding HPY13_13880 PF00376 MerR family regulatory protein HPY13_13895 PF00375 Sodium:dicarboxylate symporter family HPY13_13905 PF02001 Protein of unknown function DUF134 HPY13_13925 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY13_13925 PF01447 Thermolysin metallopeptidase, catalytic domain HPY13_13925 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY13_13925 PF01483 Proprotein convertase P-domain HPY13_13935 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HPY13_13935 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HPY13_13940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY13_13940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPY13_13945 PF00581 Rhodanese-like domain HPY13_13950 PF00563 EAL domain HPY13_13950 PF00196 Bacterial regulatory proteins, luxR family HPY13_13955 PF13419 Haloacid dehalogenase-like hydrolase HPY13_13960 PF00916 Sulfate permease family HPY13_13960 PF01740 STAS domain HPY13_14025 PF00004 ATPase family associated with various cellular activities (AAA) HPY13_14025 PF17871 AAA lid domain HPY13_14025 PF10431 C-terminal, D2-small domain, of ClpB protein HPY13_14025 PF07724 AAA domain (Cdc48 subfamily) HPY13_14070 PF05025 RbsD / FucU transport protein family HPY13_14075 PF00005 ABC transporter HPY13_14080 PF02653 Branched-chain amino acid transport system / permease component HPY13_14085 PF13407 Periplasmic binding protein domain HPY13_14090 PF00294 pfkB family carbohydrate kinase HPY13_14095 PF00356 Bacterial regulatory proteins, lacI family HPY13_14100 PF04973 Nicotinamide mononucleotide transporter HPY13_14105 PF01048 Phosphorylase superfamily HPY13_14115 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY13_14120 PF07690 Major Facilitator Superfamily HPY13_14135 PF00512 His Kinase A (phospho-acceptor) domain HPY13_14135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_14135 PF02743 Cache domain HPY13_14140 PF00072 Response regulator receiver domain HPY13_14140 PF02954 Bacterial regulatory protein, Fis family HPY13_14140 PF00158 Sigma-54 interaction domain HPY13_14155 PF01266 FAD dependent oxidoreductase HPY13_14160 PF12561 ToxR activated gene A lipoprotein domain HPY13_14160 PF00041 Fibronectin type III domain HPY13_14165 PF01327 Polypeptide deformylase HPY13_14170 PF00042 Globin HPY13_14170 PF00175 Oxidoreductase NAD-binding domain HPY13_14170 PF00970 Oxidoreductase FAD-binding domain HPY13_14175 PF03334 Na+/H+ antiporter subunit HPY13_14180 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HPY13_14200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY13_14200 PF00361 Proton-conducting membrane transporter HPY13_14200 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HPY13_14200 PF13244 Domain of unknown function (DUF4040) HPY13_14210 PF00582 Universal stress protein family HPY13_14220 PF01212 Beta-eliminating lyase HPY13_14240 PF00990 Diguanylate cyclase, GGDEF domain HPY13_14240 PF08448 PAS fold HPY13_14240 PF00563 EAL domain HPY13_14245 PF00313 'Cold-shock' DNA-binding domain HPY13_14260 PF13519 von Willebrand factor type A domain HPY13_14260 PF07584 Aerotolerance regulator N-terminal HPY13_14275 PF01882 Protein of unknown function DUF58 HPY13_14280 PF17863 AAA lid domain HPY13_14280 PF07726 ATPase family associated with various cellular activities (AAA) HPY13_14285 PF02743 Cache domain HPY13_14285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_14285 PF00672 HAMP domain HPY13_14300 PF07670 Nucleoside recognition HPY13_14300 PF01773 Na+ dependent nucleoside transporter N-terminus HPY13_14300 PF07662 Na+ dependent nucleoside transporter C-terminus HPY13_14305 PF07687 Peptidase dimerisation domain HPY13_14305 PF01546 Peptidase family M20/M25/M40 HPY13_14315 PF01590 GAF domain HPY13_14315 PF00158 Sigma-54 interaction domain HPY13_14320 PF00175 Oxidoreductase NAD-binding domain HPY13_14320 PF00042 Globin HPY13_14320 PF00970 Oxidoreductase FAD-binding domain HPY13_14325 PF00313 'Cold-shock' DNA-binding domain HPY13_14330 PF03889 Alternative ribosome-rescue factor A HPY13_14345 PF00072 Response regulator receiver domain HPY13_14355 PF01256 Carbohydrate kinase HPY13_14355 PF03853 YjeF-related protein N-terminus HPY13_14360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY13_14360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY13_14370 PF07885 Ion channel HPY13_14380 PF00478 IMP dehydrogenase / GMP reductase domain HPY13_14390 PF00271 Helicase conserved C-terminal domain HPY13_14395 PF00271 Helicase conserved C-terminal domain HPY13_14395 PF00270 DEAD/DEAH box helicase HPY13_14400 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY13_14405 PF02540 NAD synthase HPY13_14410 PF01467 Cytidylyltransferase-like HPY13_14415 PF11849 Domain of unknown function (DUF3369) HPY13_14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_14420 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_14420 PF00512 His Kinase A (phospho-acceptor) domain HPY13_14430 PF03553 Na+/H+ antiporter family HPY13_14435 PF07690 Major Facilitator Superfamily HPY13_14445 PF00657 GDSL-like Lipase/Acylhydrolase HPY13_14450 PF16458 Beta-prism lectin HPY13_14450 PF12563 Hemolytic toxin N terminal HPY13_14450 PF07968 Leukocidin/Hemolysin toxin family HPY13_14455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_14455 PF00672 HAMP domain HPY13_14455 PF12729 Four helix bundle sensory module for signal transduction HPY13_14460 PF00561 alpha/beta hydrolase fold HPY13_14465 PF03280 Proteobacterial lipase chaperone protein HPY13_14470 PF05547 Immune inhibitor A peptidase M6 HPY13_14470 PF00801 PKD domain HPY13_14495 PF01032 FecCD transport family HPY13_14500 PF01032 FecCD transport family HPY13_14505 PF00005 ABC transporter HPY13_14510 PF12833 Helix-turn-helix domain HPY13_14515 PF00593 TonB dependent receptor HPY13_14515 PF07715 TonB-dependent Receptor Plug Domain HPY13_14525 PF00871 Acetokinase family HPY13_14545 PF00005 ABC transporter HPY13_14555 PF01032 FecCD transport family HPY13_14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_14565 PF03466 LysR substrate binding domain HPY13_14575 PF00672 HAMP domain HPY13_14575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_14575 PF00512 His Kinase A (phospho-acceptor) domain HPY13_14580 PF00072 Response regulator receiver domain HPY13_14580 PF00486 Transcriptional regulatory protein, C terminal HPY13_14590 PF01261 Xylose isomerase-like TIM barrel HPY13_14595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY13_14605 PF00596 Class II Aldolase and Adducin N-terminal domain HPY13_14610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY13_14615 PF03611 PTS system sugar-specific permease component HPY13_14620 PF00455 DeoR C terminal sensor domain HPY13_14620 PF08220 DeoR-like helix-turn-helix domain HPY13_14635 PF00128 Alpha amylase, catalytic domain HPY13_14640 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_14655 PF00072 Response regulator receiver domain HPY13_14655 PF00486 Transcriptional regulatory protein, C terminal HPY13_14660 PF00512 His Kinase A (phospho-acceptor) domain HPY13_14660 PF16736 Single Cache-like HPY13_14660 PF00989 PAS fold HPY13_14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_14700 PF07690 Major Facilitator Superfamily HPY13_14705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_14705 PF00672 HAMP domain HPY13_14705 PF02743 Cache domain HPY13_14715 PF00768 D-alanyl-D-alanine carboxypeptidase HPY13_14715 PF07943 Penicillin-binding protein 5, C-terminal domain HPY13_14730 PF00194 Eukaryotic-type carbonic anhydrase HPY13_14735 PF02347 Glycine cleavage system P-protein HPY13_14740 PF01597 Glycine cleavage H-protein HPY13_14745 PF00464 Serine hydroxymethyltransferase HPY13_14755 PF08669 Glycine cleavage T-protein C-terminal barrel domain HPY13_14755 PF01571 Aminomethyltransferase folate-binding domain HPY13_14760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY13_14760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY13_14760 PF02824 TGS domain HPY13_14760 PF03129 Anticodon binding domain HPY13_14765 PF00707 Translation initiation factor IF-3, C-terminal domain HPY13_14765 PF05198 Translation initiation factor IF-3, N-terminal domain HPY13_14770 PF01632 Ribosomal protein L35 HPY13_14775 PF00453 Ribosomal protein L20 HPY13_14780 PF00589 Phage integrase family HPY13_14780 PF13495 Phage integrase, N-terminal SAM-like domain HPY13_14935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY13_14960 PF01043 SecA preprotein cross-linking domain HPY13_14960 PF07516 SecA Wing and Scaffold domain HPY13_14960 PF07517 SecA DEAD-like domain HPY13_14960 PF02810 SEC-C motif HPY13_14965 PF08212 Lipocalin-like domain HPY13_15090 PF13673 Acetyltransferase (GNAT) domain HPY13_15100 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HPY13_15135 PF13302 Acetyltransferase (GNAT) domain HPY13_15165 PF13419 Haloacid dehalogenase-like hydrolase HPY13_15180 PF12833 Helix-turn-helix domain HPY13_15180 PF01965 DJ-1/PfpI family HPY13_15340 PF00929 Exonuclease HPY13_15340 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPY13_15340 PF02811 PHP domain HPY13_15340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPY13_15340 PF14579 Helix-hairpin-helix motif HPY13_15375 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HPY13_15410 PF00583 Acetyltransferase (GNAT) family HPY13_15480 PF00561 alpha/beta hydrolase fold HPY13_15555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY13_15590 PF13302 Acetyltransferase (GNAT) domain HPY13_15645 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HPY13_15650 PF01381 Helix-turn-helix HPY13_15705 PF04607 Region found in RelA / SpoT proteins HPY13_15790 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HPY13_15895 PF09722 Protein of unknown function (DUF2384) HPY13_15905 PF13673 Acetyltransferase (GNAT) domain HPY13_15920 PF00583 Acetyltransferase (GNAT) family HPY13_15940 PF13302 Acetyltransferase (GNAT) domain HPY13_15960 PF01966 HD domain HPY13_15975 PF02567 Phenazine biosynthesis-like protein HPY13_16010 PF02016 LD-carboxypeptidase N-terminal domain HPY13_16010 PF17676 LD-carboxypeptidase C-terminal domain HPY13_16020 PF13597 Anaerobic ribonucleoside-triphosphate reductase HPY13_16020 PF03477 ATP cone domain HPY13_16030 PF00155 Aminotransferase class I and II HPY13_16035 PF08443 RimK-like ATP-grasp domain HPY13_16035 PF18030 RimK PreATP-grasp domain HPY13_16040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY13_16040 PF02378 Phosphotransferase system, EIIC HPY13_16045 PF00294 pfkB family carbohydrate kinase HPY13_16050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY13_16050 PF00381 PTS HPr component phosphorylation site HPY13_16055 PF00356 Bacterial regulatory proteins, lacI family HPY13_16055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY13_16060 PF12320 Type 5 capsule protein repressor C-terminal domain HPY13_16060 PF00149 Calcineurin-like phosphoesterase HPY13_16065 PF13476 AAA domain HPY13_16070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_16070 PF00072 Response regulator receiver domain HPY13_16075 PF00155 Aminotransferase class I and II HPY13_16085 PF00654 Voltage gated chloride channel HPY13_16090 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPY13_16090 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPY13_16095 PF01926 50S ribosome-binding GTPase HPY13_16100 PF02705 K+ potassium transporter HPY13_16105 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPY13_16105 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPY13_16105 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPY13_16105 PF10371 Domain of unknown function HPY13_16105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY13_16110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_16110 PF13493 Domain of unknown function (DUF4118) HPY13_16110 PF00512 His Kinase A (phospho-acceptor) domain HPY13_16110 PF02702 Osmosensitive K+ channel His kinase sensor domain HPY13_16115 PF00072 Response regulator receiver domain HPY13_16115 PF00486 Transcriptional regulatory protein, C terminal HPY13_16120 PF02416 mttA/Hcf106 family HPY13_16125 PF09335 SNARE associated Golgi protein HPY13_16135 PF00563 EAL domain HPY13_16135 PF10388 EAL-domain associated signalling protein domain HPY13_16145 PF01292 Prokaryotic cytochrome b561 HPY13_16150 PF04264 YceI-like domain HPY13_16155 PF01226 Formate/nitrite transporter HPY13_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_16160 PF03466 LysR substrate binding domain HPY13_16165 PF06496 Protein of unknown function (DUF1097) HPY13_16170 PF11398 Protein of unknown function (DUF2813) HPY13_16175 PF00149 Calcineurin-like phosphoesterase HPY13_16175 PF02872 5'-nucleotidase, C-terminal domain HPY13_16180 PF03741 Integral membrane protein TerC family HPY13_16190 PF08274 PhnA Zinc-Ribbon HPY13_16190 PF03831 PhnA domain HPY13_16220 PF17151 Periplasmic sensor domain HPY13_16220 PF00990 Diguanylate cyclase, GGDEF domain HPY13_16240 PF00990 Diguanylate cyclase, GGDEF domain HPY13_16240 PF17158 Membrane-associated sensor, integral membrane domain HPY13_16255 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HPY13_16255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY13_16255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY13_16260 PF02233 NAD(P) transhydrogenase beta subunit HPY13_16270 PF00072 Response regulator receiver domain HPY13_16270 PF00486 Transcriptional regulatory protein, C terminal HPY13_16285 PF03701 Uncharacterised protein family (UPF0181) HPY13_16300 PF01966 HD domain HPY13_16300 PF13286 Phosphohydrolase-associated domain HPY13_16355 PF01253 Translation initiation factor SUI1 HPY13_16365 PF01820 D-ala D-ala ligase N-terminus HPY13_16365 PF07478 D-ala D-ala ligase C-terminus HPY13_16375 PF00583 Acetyltransferase (GNAT) family HPY13_16375 PF13380 CoA binding domain HPY13_16375 PF13607 Succinyl-CoA ligase like flavodoxin domain HPY13_16380 PF03466 LysR substrate binding domain HPY13_16380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_16385 PF07715 TonB-dependent Receptor Plug Domain HPY13_16385 PF04886 PT repeat HPY13_16385 PF00593 TonB dependent receptor HPY13_16390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY13_16390 PF12793 Sugar transport-related sRNA regulator N-term HPY13_16400 PF03061 Thioesterase superfamily HPY13_16420 PF00043 Glutathione S-transferase, C-terminal domain HPY13_16420 PF02798 Glutathione S-transferase, N-terminal domain HPY13_16435 PF12804 MobA-like NTP transferase domain HPY13_16435 PF03479 Plants and Prokaryotes Conserved (PCC) domain HPY13_16435 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_16440 PF00005 ABC transporter HPY13_16440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_16445 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_16445 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY13_16450 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_16455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY13_16480 PF00854 POT family HPY13_16490 PF00392 Bacterial regulatory proteins, gntR family HPY13_16490 PF07702 UTRA domain HPY13_16495 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_16500 PF00005 ABC transporter HPY13_16510 PF00266 Aminotransferase class-V HPY13_16520 PF13419 Haloacid dehalogenase-like hydrolase HPY13_16525 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY13_16525 PF14760 Rnk N-terminus HPY13_16530 PF13419 Haloacid dehalogenase-like hydrolase HPY13_16545 PF01741 Large-conductance mechanosensitive channel, MscL HPY13_16550 PF01268 Formate--tetrahydrofolate ligase HPY13_16555 PF01625 Peptide methionine sulfoxide reductase HPY13_16555 PF01641 SelR domain HPY13_16560 PF01227 GTP cyclohydrolase I HPY13_16565 PF00994 Probable molybdopterin binding domain HPY13_16565 PF03454 MoeA C-terminal region (domain IV) HPY13_16565 PF03453 MoeA N-terminal region (domain I and II) HPY13_16570 PF00899 ThiF family HPY13_16580 PF00581 Rhodanese-like domain HPY13_16585 PF04198 Putative sugar-binding domain HPY13_16590 PF00923 Transaldolase/Fructose-6-phosphate aldolase HPY13_16595 PF02779 Transketolase, pyrimidine binding domain HPY13_16595 PF02780 Transketolase, C-terminal domain HPY13_16595 PF00456 Transketolase, thiamine diphosphate binding domain HPY13_16620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY13_16620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY13_16635 PF06942 GlpM protein HPY13_16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_16645 PF03466 LysR substrate binding domain HPY13_16650 PF03992 Antibiotic biosynthesis monooxygenase HPY13_16655 PF00881 Nitroreductase family HPY13_16660 PF00873 AcrB/AcrD/AcrF family HPY13_16675 PF04143 Sulphur transport HPY13_16695 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_16695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY13_16700 PF07804 HipA-like C-terminal domain HPY13_16700 PF13657 HipA N-terminal domain HPY13_16720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY13_16720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY13_16725 PF01022 Bacterial regulatory protein, arsR family HPY13_16735 PF12849 PBP superfamily domain HPY13_16740 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_16745 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_16750 PF00005 ABC transporter HPY13_16755 PF01895 PhoU domain HPY13_16760 PF00916 Sulfate permease family HPY13_16760 PF01740 STAS domain HPY13_16765 PF00582 Universal stress protein family HPY13_16770 PF00072 Response regulator receiver domain HPY13_16795 PF04542 Sigma-70 region 2 HPY13_16795 PF04545 Sigma-70, region 4 HPY13_16800 PF01758 Sodium Bile acid symporter family HPY13_16805 PF01022 Bacterial regulatory protein, arsR family HPY13_16810 PF00817 impB/mucB/samB family HPY13_16810 PF11799 impB/mucB/samB family C-terminal domain HPY13_16810 PF11798 IMS family HHH motif HPY13_16810 PF13438 Domain of unknown function (DUF4113) HPY13_16815 PF00717 Peptidase S24-like HPY13_16865 PF03707 Bacterial signalling protein N terminal repeat HPY13_16865 PF00990 Diguanylate cyclase, GGDEF domain HPY13_16865 PF00563 EAL domain HPY13_16880 PF13737 Transposase DDE domain HPY13_16890 PF07859 alpha/beta hydrolase fold HPY13_16905 PF09827 CRISPR associated protein Cas2 HPY13_16910 PF01867 CRISPR associated protein Cas1 HPY13_16970 PF00816 H-NS histone family HPY13_17010 PF02384 N-6 DNA Methylase HPY13_17025 PF01797 Transposase IS200 like HPY13_17040 PF00892 EamA-like transporter family HPY13_17045 PF00376 MerR family regulatory protein HPY13_17045 PF09278 MerR, DNA binding HPY13_17050 PF02583 Metal-sensitive transcriptional repressor HPY13_17055 PF03824 High-affinity nickel-transport protein HPY13_17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_17060 PF00512 His Kinase A (phospho-acceptor) domain HPY13_17060 PF02702 Osmosensitive K+ channel His kinase sensor domain HPY13_17060 PF13493 Domain of unknown function (DUF4118) HPY13_17065 PF00072 Response regulator receiver domain HPY13_17065 PF00486 Transcriptional regulatory protein, C terminal HPY13_17070 PF02386 Cation transport protein HPY13_17075 PF02254 TrkA-N domain HPY13_17075 PF02080 TrkA-C domain HPY13_17080 PF02386 Cation transport protein HPY13_17120 PF07508 Recombinase HPY13_17120 PF13408 Recombinase zinc beta ribbon domain HPY13_17120 PF00239 Resolvase, N terminal domain HPY13_17125 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_17125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY13_17170 PF02378 Phosphotransferase system, EIIC HPY13_17170 PF00367 phosphotransferase system, EIIB HPY13_17180 PF08244 Glycosyl hydrolases family 32 C terminal HPY13_17180 PF00251 Glycosyl hydrolases family 32 N-terminal domain HPY13_17185 PF00294 pfkB family carbohydrate kinase HPY13_17190 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HPY13_17190 PF01266 FAD dependent oxidoreductase HPY13_17195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_17195 PF00672 HAMP domain HPY13_17200 PF00691 OmpA family HPY13_17200 PF13488 Glycine zipper HPY13_17205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY13_17205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY13_17210 PF13419 Haloacid dehalogenase-like hydrolase HPY13_17215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_17215 PF12729 Four helix bundle sensory module for signal transduction HPY13_17215 PF00672 HAMP domain HPY13_17220 PF03606 C4-dicarboxylate anaerobic carrier HPY13_17225 PF03313 Serine dehydratase alpha chain HPY13_17225 PF03315 Serine dehydratase beta chain HPY13_17230 PF00474 Sodium:solute symporter family HPY13_17245 PF00356 Bacterial regulatory proteins, lacI family HPY13_17250 PF00072 Response regulator receiver domain HPY13_17250 PF00196 Bacterial regulatory proteins, luxR family HPY13_17255 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HPY13_17255 PF07730 Histidine kinase HPY13_17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_17255 PF00672 HAMP domain HPY13_17260 PF13187 4Fe-4S dicluster domain HPY13_17260 PF12838 4Fe-4S dicluster domain HPY13_17270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY13_17270 PF01568 Molydopterin dinucleotide binding domain HPY13_17270 PF00384 Molybdopterin oxidoreductase HPY13_17275 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HPY13_17280 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY13_17290 PF01966 HD domain HPY13_17295 PF00196 Bacterial regulatory proteins, luxR family HPY13_17295 PF00072 Response regulator receiver domain HPY13_17300 PF05231 MASE1 HPY13_17300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_17300 PF07730 Histidine kinase HPY13_17305 PF07690 Major Facilitator Superfamily HPY13_17315 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_17320 PF00005 ABC transporter HPY13_17320 PF08402 TOBE domain HPY13_17325 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HPY13_17335 PF00108 Thiolase, N-terminal domain HPY13_17335 PF02803 Thiolase, C-terminal domain HPY13_17340 PF00106 short chain dehydrogenase HPY13_17345 PF02355 Protein export membrane protein HPY13_17345 PF07549 SecD/SecF GG Motif HPY13_17350 PF13721 SecD export protein N-terminal TM region HPY13_17350 PF02355 Protein export membrane protein HPY13_17350 PF07549 SecD/SecF GG Motif HPY13_17365 PF00990 Diguanylate cyclase, GGDEF domain HPY13_17365 PF17158 Membrane-associated sensor, integral membrane domain HPY13_17370 PF00483 Nucleotidyl transferase HPY13_17375 PF06483 Chitinase C HPY13_17375 PF00704 Glycosyl hydrolases family 18 HPY13_17380 PF00465 Iron-containing alcohol dehydrogenase HPY13_17390 PF14532 Sigma-54 interaction domain HPY13_17390 PF00072 Response regulator receiver domain HPY13_17390 PF02954 Bacterial regulatory protein, Fis family HPY13_17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_17395 PF00512 His Kinase A (phospho-acceptor) domain HPY13_17395 PF02743 Cache domain HPY13_17405 PF07690 Major Facilitator Superfamily HPY13_17410 PF00224 Pyruvate kinase, barrel domain HPY13_17410 PF02887 Pyruvate kinase, alpha/beta domain HPY13_17415 PF00672 HAMP domain HPY13_17415 PF00512 His Kinase A (phospho-acceptor) domain HPY13_17415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_17415 PF01627 Hpt domain HPY13_17415 PF00072 Response regulator receiver domain HPY13_17420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY13_17425 PF02142 MGS-like domain HPY13_17430 PF00857 Isochorismatase family HPY13_17435 PF01219 Prokaryotic diacylglycerol kinase HPY13_17440 PF12462 DNA helicase IV / RNA helicase N terminal HPY13_17440 PF13361 UvrD-like helicase C-terminal domain HPY13_17440 PF00580 UvrD/REP helicase N-terminal domain HPY13_17445 PF12805 FUSC-like inner membrane protein yccS HPY13_17450 PF13188 PAS domain HPY13_17450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_17450 PF08448 PAS fold HPY13_17450 PF00072 Response regulator receiver domain HPY13_17450 PF00512 His Kinase A (phospho-acceptor) domain HPY13_17475 PF03459 TOBE domain HPY13_17475 PF00005 ABC transporter HPY13_17480 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_17490 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY13_17490 PF07685 CobB/CobQ-like glutamine amidotransferase domain HPY13_17520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_17520 PF09308 LuxQ, periplasmic HPY13_17520 PF00072 Response regulator receiver domain HPY13_17520 PF00512 His Kinase A (phospho-acceptor) domain HPY13_17525 PF13407 Periplasmic binding protein domain HPY13_17535 PF01541 GIY-YIG catalytic domain HPY13_17540 PF04337 Protein of unknown function, DUF480 HPY13_17550 PF04363 Protein of unknown function (DUF496) HPY13_17560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPY13_17560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HPY13_17565 PF00230 Major intrinsic protein HPY13_17570 PF04324 BFD-like [2Fe-2S] binding domain HPY13_17570 PF01266 FAD dependent oxidoreductase HPY13_17575 PF00890 FAD binding domain HPY13_17580 PF02754 Cysteine-rich domain HPY13_17580 PF13183 4Fe-4S dicluster domain HPY13_17585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY13_17585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY13_17590 PF00085 Thioredoxin HPY13_17595 PF07690 Major Facilitator Superfamily HPY13_17615 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_17620 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_17625 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_17630 PF00005 ABC transporter HPY13_17640 PF05762 VWA domain containing CoxE-like protein HPY13_17645 PF17868 AAA lid domain HPY13_17645 PF07728 AAA domain (dynein-related subfamily) HPY13_17645 PF12592 Protein of unknown function (DUF3763) HPY13_17650 PF00293 NUDIX domain HPY13_17655 PF01212 Beta-eliminating lyase HPY13_17660 PF00034 Cytochrome c HPY13_17665 PF08361 MAATS-type transcriptional repressor, C-terminal region HPY13_17665 PF00440 Bacterial regulatory proteins, tetR family HPY13_17670 PF00270 DEAD/DEAH box helicase HPY13_17670 PF00271 Helicase conserved C-terminal domain HPY13_17675 PF04336 Acyl carrier protein phosphodiesterase HPY13_17680 PF03222 Tryptophan/tyrosine permease family HPY13_17685 PF12729 Four helix bundle sensory module for signal transduction HPY13_17685 PF00672 HAMP domain HPY13_17685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_17690 PF16363 GDP-mannose 4,6 dehydratase HPY13_17695 PF03746 LamB/YcsF family HPY13_17705 PF02626 Carboxyltransferase domain, subdomain A and B HPY13_17715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY13_17715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY13_17725 PF00005 ABC transporter HPY13_17730 PF13472 GDSL-like Lipase/Acylhydrolase family HPY13_17735 PF07055 Enoyl reductase FAD binding domain HPY13_17735 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY13_17735 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY13_17740 PF00990 Diguanylate cyclase, GGDEF domain HPY13_17740 PF00563 EAL domain HPY13_17740 PF00498 FHA domain HPY13_17750 PF00226 DnaJ domain HPY13_17750 PF01556 DnaJ C terminal domain HPY13_17750 PF00684 DnaJ central domain HPY13_17765 PF13419 Haloacid dehalogenase-like hydrolase HPY13_17780 PF00294 pfkB family carbohydrate kinase HPY13_17785 PF00884 Sulfatase HPY13_17795 PF00271 Helicase conserved C-terminal domain HPY13_17795 PF00270 DEAD/DEAH box helicase HPY13_17795 PF03880 DbpA RNA binding domain HPY13_17800 PF08206 Ribonuclease B OB domain HPY13_17800 PF00575 S1 RNA binding domain HPY13_17800 PF00773 RNB domain HPY13_17810 PF12849 PBP superfamily domain HPY13_17815 PF01575 MaoC like domain HPY13_17820 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HPY13_17825 PF18416 N-acetylglucosamine binding protein domain 2 HPY13_17825 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HPY13_17835 PF04151 Bacterial pre-peptidase C-terminal domain HPY13_17835 PF04389 Peptidase family M28 HPY13_17840 PF00491 Arginase family HPY13_17845 PF17810 Arginine decarboxylase helical bundle domain HPY13_17845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY13_17845 PF17944 Arginine decarboxylase C-terminal helical extension HPY13_17855 PF00571 CBS domain HPY13_17855 PF03448 MgtE intracellular N domain HPY13_17855 PF01769 Divalent cation transporter HPY13_17860 PF00166 Chaperonin 10 Kd subunit HPY13_17865 PF00118 TCP-1/cpn60 chaperonin family HPY13_17875 PF00696 Amino acid kinase family HPY13_17875 PF13840 ACT domain HPY13_17880 PF06339 Ectoine synthase HPY13_17885 PF00202 Aminotransferase class-III HPY13_17890 PF00583 Acetyltransferase (GNAT) family HPY13_17895 PF01329 Pterin 4 alpha carbinolamine dehydratase HPY13_17900 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HPY13_17905 PF13193 AMP-binding enzyme C-terminal domain HPY13_17905 PF00501 AMP-binding enzyme HPY13_17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_17925 PF03466 LysR substrate binding domain HPY13_17935 PF00892 EamA-like transporter family HPY13_17940 PF14602 Hexapeptide repeat of succinyl-transferase HPY13_17940 PF00132 Bacterial transferase hexapeptide (six repeats) HPY13_17940 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HPY13_17945 PF00571 CBS domain HPY13_17945 PF01595 Cyclin M transmembrane N-terminal domain HPY13_17945 PF03471 Transporter associated domain HPY13_17950 PF02566 OsmC-like protein HPY13_17955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY13_17960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY13_17960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY13_17980 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY13_17985 PF13520 Amino acid permease HPY13_17990 PF00990 Diguanylate cyclase, GGDEF domain HPY13_18000 PF00072 Response regulator receiver domain HPY13_18000 PF04397 LytTr DNA-binding domain HPY13_18005 PF07694 5TMR of 5TMR-LYT HPY13_18005 PF06580 Histidine kinase HPY13_18005 PF13492 GAF domain HPY13_18005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_18020 PF12704 MacB-like periplasmic core domain HPY13_18020 PF00005 ABC transporter HPY13_18020 PF02687 FtsX-like permease family HPY13_18025 PF00005 ABC transporter HPY13_18035 PF00248 Aldo/keto reductase family HPY13_18040 PF00128 Alpha amylase, catalytic domain HPY13_18050 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY13_18055 PF12262 Bacterial virulence factor lipase N-terminal HPY13_18060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18060 PF13426 PAS domain HPY13_18060 PF08447 PAS fold HPY13_18065 PF04151 Bacterial pre-peptidase C-terminal domain HPY13_18065 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY13_18065 PF03413 Peptidase propeptide and YPEB domain HPY13_18065 PF01447 Thermolysin metallopeptidase, catalytic domain HPY13_18065 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY13_18070 PF03922 OmpW family HPY13_18080 PF00768 D-alanyl-D-alanine carboxypeptidase HPY13_18085 PF00773 RNB domain HPY13_18085 PF00575 S1 RNA binding domain HPY13_18085 PF08461 Ribonuclease R winged-helix domain HPY13_18085 PF17876 Cold shock domain HPY13_18085 PF08206 Ribonuclease B OB domain HPY13_18090 PF00313 'Cold-shock' DNA-binding domain HPY13_18100 PF00291 Pyridoxal-phosphate dependent enzyme HPY13_18105 PF03466 LysR substrate binding domain HPY13_18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_18115 PF02963 Restriction endonuclease EcoRI HPY13_18120 PF13651 Adenine-specific methyltransferase EcoRI HPY13_18125 PF00107 Zinc-binding dehydrogenase HPY13_18125 PF08240 Alcohol dehydrogenase GroES-like domain HPY13_18130 PF00155 Aminotransferase class I and II HPY13_18135 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY13_18140 PF03466 LysR substrate binding domain HPY13_18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_18145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY13_18175 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HPY13_18175 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HPY13_18180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY13_18185 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HPY13_18185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY13_18210 PF02595 Glycerate kinase family HPY13_18215 PF02447 GntP family permease HPY13_18225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18225 PF00672 HAMP domain HPY13_18230 PF01243 Pyridoxamine 5'-phosphate oxidase HPY13_18235 PF06228 Haem utilisation ChuX/HutX HPY13_18240 PF04055 Radical SAM superfamily HPY13_18245 PF03544 Gram-negative bacterial TonB protein C-terminal HPY13_18250 PF01618 MotA/TolQ/ExbB proton channel family HPY13_18255 PF02472 Biopolymer transport protein ExbD/TolR HPY13_18260 PF01497 Periplasmic binding protein HPY13_18265 PF01032 FecCD transport family HPY13_18270 PF00005 ABC transporter HPY13_18300 PF02743 Cache domain HPY13_18300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18300 PF00672 HAMP domain HPY13_18305 PF03476 MOSC N-terminal beta barrel domain HPY13_18305 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY13_18305 PF03473 MOSC domain HPY13_18305 PF03476 MOSC N-terminal beta barrel domain HPY13_18305 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY13_18305 PF03473 MOSC domain HPY13_18310 PF01979 Amidohydrolase family HPY13_18320 PF05656 Protein of unknown function (DUF805) HPY13_18330 PF05958 tRNA (Uracil-5-)-methyltransferase HPY13_18335 PF05661 Protein of unknown function (DUF808) HPY13_18340 PF00990 Diguanylate cyclase, GGDEF domain HPY13_18340 PF17151 Periplasmic sensor domain HPY13_18350 PF00313 'Cold-shock' DNA-binding domain HPY13_18375 PF08448 PAS fold HPY13_18375 PF00990 Diguanylate cyclase, GGDEF domain HPY13_18380 PF00455 DeoR C terminal sensor domain HPY13_18380 PF08220 DeoR-like helix-turn-helix domain HPY13_18395 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_18400 PF14785 Maltose transport system permease protein MalF P2 domain HPY13_18400 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_18405 PF01547 Bacterial extracellular solute-binding protein HPY13_18410 PF00005 ABC transporter HPY13_18410 PF08402 TOBE domain HPY13_18415 PF13302 Acetyltransferase (GNAT) domain HPY13_18430 PF01906 Putative heavy-metal-binding HPY13_18435 PF00196 Bacterial regulatory proteins, luxR family HPY13_18445 PF00072 Response regulator receiver domain HPY13_18445 PF01584 CheW-like domain HPY13_18450 PF01047 MarR family HPY13_18455 PF00990 Diguanylate cyclase, GGDEF domain HPY13_18470 PF00990 Diguanylate cyclase, GGDEF domain HPY13_18470 PF03707 Bacterial signalling protein N terminal repeat HPY13_18470 PF00563 EAL domain HPY13_18490 PF03466 LysR substrate binding domain HPY13_18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_18495 PF00563 EAL domain HPY13_18495 PF00990 Diguanylate cyclase, GGDEF domain HPY13_18505 PF02678 Pirin HPY13_18505 PF05726 Pirin C-terminal cupin domain HPY13_18510 PF06865 Pyrimidine/purine nucleoside phosphorylase HPY13_18520 PF07690 Major Facilitator Superfamily HPY13_18525 PF00672 HAMP domain HPY13_18525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18525 PF17200 Single Cache domain 2 HPY13_18530 PF13654 AAA domain HPY13_18530 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY13_18540 PF00005 ABC transporter HPY13_18540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_18545 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_18550 PF00672 HAMP domain HPY13_18550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18550 PF17200 Single Cache domain 2 HPY13_18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_18560 PF03466 LysR substrate binding domain HPY13_18570 PF02652 L-lactate permease HPY13_18575 PF01070 FMN-dependent dehydrogenase HPY13_18585 PF03618 Kinase/pyrophosphorylase HPY13_18590 PF02896 PEP-utilising enzyme, TIM barrel domain HPY13_18590 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPY13_18590 PF00391 PEP-utilising enzyme, mobile domain HPY13_18595 PF08447 PAS fold HPY13_18595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18600 PF01554 MatE HPY13_18605 PF00271 Helicase conserved C-terminal domain HPY13_18605 PF00270 DEAD/DEAH box helicase HPY13_18610 PF12833 Helix-turn-helix domain HPY13_18615 PF02627 Carboxymuconolactone decarboxylase family HPY13_18625 PF00664 ABC transporter transmembrane region HPY13_18625 PF00005 ABC transporter HPY13_18635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY13_18645 PF01810 LysE type translocator HPY13_18650 PF12833 Helix-turn-helix domain HPY13_18665 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY13_18670 PF01047 MarR family HPY13_18675 PF02566 OsmC-like protein HPY13_18680 PF13609 Gram-negative porin HPY13_18685 PF00892 EamA-like transporter family HPY13_18690 PF00462 Glutaredoxin HPY13_18695 PF07670 Nucleoside recognition HPY13_18700 PF07670 Nucleoside recognition HPY13_18705 PF03600 Citrate transporter HPY13_18710 PF00072 Response regulator receiver domain HPY13_18710 PF12431 Transcriptional regulator HPY13_18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_18715 PF17203 Single cache domain 3 HPY13_18720 PF00939 Sodium:sulfate symporter transmembrane region HPY13_18730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY13_18730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPY13_18740 PF07681 DoxX HPY13_18745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_18745 PF03466 LysR substrate binding domain HPY13_18765 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY13_18770 PF01797 Transposase IS200 like HPY13_18780 PF07148 Maltose operon periplasmic protein precursor (MalM) HPY13_18785 PF02264 LamB porin HPY13_18790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY13_18790 PF00128 Alpha amylase, catalytic domain HPY13_18800 PF12729 Four helix bundle sensory module for signal transduction HPY13_18800 PF00672 HAMP domain HPY13_18800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18810 PF00672 HAMP domain HPY13_18820 PF00793 DAHP synthetase I family HPY13_18825 PF00005 ABC transporter HPY13_18830 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_18835 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY13_18840 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_18845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY13_18845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY13_18845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY13_18845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY13_18850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY13_18850 PF02378 Phosphotransferase system, EIIC HPY13_18850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY13_18855 PF08125 Mannitol dehydrogenase C-terminal domain HPY13_18855 PF01232 Mannitol dehydrogenase Rossmann domain HPY13_18860 PF05068 Mannitol repressor HPY13_18865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY13_18890 PF00892 EamA-like transporter family HPY13_18895 PF01047 MarR family HPY13_18915 PF13460 NAD(P)H-binding HPY13_18920 PF03466 LysR substrate binding domain HPY13_18920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_18930 PF00106 short chain dehydrogenase HPY13_18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY13_18935 PF03466 LysR substrate binding domain HPY13_18940 PF04013 Putative SAM-dependent RNA methyltransferase HPY13_18945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY13_18955 PF13520 Amino acid permease HPY13_18960 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY13_18960 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY13_18960 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY13_18970 PF00171 Aldehyde dehydrogenase family HPY13_18975 PF01037 Lrp/AsnC ligand binding domain HPY13_18980 PF02743 Cache domain HPY13_18980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_18980 PF00672 HAMP domain HPY13_18990 PF00474 Sodium:solute symporter family HPY13_19000 PF01619 Proline dehydrogenase HPY13_19000 PF00171 Aldehyde dehydrogenase family HPY13_19000 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HPY13_19000 PF14850 DNA-binding domain of Proline dehydrogenase HPY13_19005 PF12833 Helix-turn-helix domain HPY13_19015 PF03781 Sulfatase-modifying factor enzyme 1 HPY13_19020 PF00196 Bacterial regulatory proteins, luxR family HPY13_19020 PF00072 Response regulator receiver domain HPY13_19025 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HPY13_19025 PF01243 Pyridoxamine 5'-phosphate oxidase HPY13_19030 PF00529 HlyD membrane-fusion protein of T1SS HPY13_19045 PF03412 Peptidase C39 family HPY13_19045 PF00005 ABC transporter HPY13_19045 PF00664 ABC transporter transmembrane region HPY13_19055 PF00486 Transcriptional regulatory protein, C terminal HPY13_19055 PF00072 Response regulator receiver domain HPY13_19065 PF02743 Cache domain HPY13_19065 PF00672 HAMP domain HPY13_19065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_19070 PF00072 Response regulator receiver domain HPY13_19070 PF01339 CheB methylesterase HPY13_19075 PF03975 CheD chemotactic sensory transduction HPY13_19080 PF01739 CheR methyltransferase, SAM binding domain HPY13_19080 PF03705 CheR methyltransferase, all-alpha domain HPY13_19085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY13_19085 PF00672 HAMP domain HPY13_19085 PF02203 Tar ligand binding domain homologue HPY13_19090 PF01584 CheW-like domain HPY13_19095 PF01584 CheW-like domain HPY13_19100 PF01584 CheW-like domain HPY13_19100 PF09078 CheY binding HPY13_19100 PF02895 Signal transducing histidine kinase, homodimeric domain HPY13_19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_19100 PF01627 Hpt domain HPY13_19105 PF00072 Response regulator receiver domain HPY13_19120 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_19125 PF00528 Binding-protein-dependent transport system inner membrane component HPY13_19125 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY13_19130 PF00005 ABC transporter HPY13_19130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY13_19135 PF08019 Phosphoethanolamine transferase EptA/EptB HPY13_19135 PF00884 Sulfatase HPY13_19140 PF08521 Two-component sensor kinase N-terminal HPY13_19140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY13_19140 PF00512 His Kinase A (phospho-acceptor) domain HPY13_19145 PF00072 Response regulator receiver domain HPY13_19145 PF00486 Transcriptional regulatory protein, C terminal HPY13_19165 PF00501 AMP-binding enzyme HPY13_19175 PF05127 Helicase HPY13_19175 PF13718 GNAT acetyltransferase 2 HPY13_19180 PF13416 Bacterial extracellular solute-binding protein