locus-tag class description HPY15_00005 PF00308 Bacterial dnaA protein HPY15_00005 PF11638 DnaA N-terminal domain HPY15_00005 PF08299 Bacterial dnaA protein helix-turn-helix HPY15_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HPY15_00010 PF02767 DNA polymerase III beta subunit, central domain HPY15_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HPY15_00015 PF02463 RecF/RecN/SMC N terminal domain HPY15_00020 PF01751 Toprim domain HPY15_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_00020 PF18053 DNA gyrase B subunit insert domain HPY15_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HPY15_00020 PF00204 DNA gyrase B HPY15_00030 PF00011 Hsp20/alpha crystallin family HPY15_00035 PF00155 Aminotransferase class I and II HPY15_00040 PF02092 Glycyl-tRNA synthetase beta subunit HPY15_00040 PF05746 DALR anticodon binding domain HPY15_00045 PF02091 Glycyl-tRNA synthetase alpha subunit HPY15_00050 PF01169 Uncharacterized protein family UPF0016 HPY15_00060 PF01206 Sulfurtransferase TusA HPY15_00070 PF00107 Zinc-binding dehydrogenase HPY15_00070 PF08240 Alcohol dehydrogenase GroES-like domain HPY15_00075 PF00585 C-terminal regulatory domain of Threonine dehydratase HPY15_00075 PF00291 Pyridoxal-phosphate dependent enzyme HPY15_00080 PF00920 Dehydratase family HPY15_00085 PF01063 Amino-transferase class IV HPY15_00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY15_00095 PF00205 Thiamine pyrophosphate enzyme, central domain HPY15_00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY15_00100 PF01078 Magnesium chelatase, subunit ChlI HPY15_00100 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPY15_00105 PF01553 Acyltransferase HPY15_00110 PF01323 DSBA-like thioredoxin domain HPY15_00115 PF01636 Phosphotransferase enzyme family HPY15_00120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HPY15_00120 PF12801 4Fe-4S binding domain HPY15_00120 PF13746 4Fe-4S dicluster domain HPY15_00125 PF06288 Protein of unknown function (DUF1040) HPY15_00130 PF07070 SpoOM protein HPY15_00135 PF03006 Haemolysin-III related HPY15_00145 PF02386 Cation transport protein HPY15_00150 PF02080 TrkA-C domain HPY15_00150 PF02254 TrkA-N domain HPY15_00155 PF01029 NusB family HPY15_00155 PF01189 16S rRNA methyltransferase RsmB/F HPY15_00160 PF02911 Formyl transferase, C-terminal domain HPY15_00160 PF00551 Formyl transferase HPY15_00165 PF01327 Polypeptide deformylase HPY15_00170 PF01476 LysM domain HPY15_00175 PF02481 DNA recombination-mediator protein A HPY15_00175 PF17782 DprA winged helix domain HPY15_00180 PF04361 Protein of unknown function (DUF494) HPY15_00185 PF01396 Topoisomerase DNA binding C4 zinc finger HPY15_00190 PF02222 ATP-grasp domain HPY15_00190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HPY15_00195 PF00731 AIR carboxylase HPY15_00200 PF01300 Telomere recombination HPY15_00205 PF01218 Coproporphyrinogen III oxidase HPY15_00210 PF08501 Shikimate dehydrogenase substrate binding domain HPY15_00210 PF01488 Shikimate / quinate 5-dehydrogenase HPY15_00210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HPY15_00220 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_00255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HPY15_00260 PF01964 Radical SAM ThiC family HPY15_00260 PF13667 ThiC-associated domain HPY15_00265 PF02581 Thiamine monophosphate synthase HPY15_00270 PF00899 ThiF family HPY15_00275 PF02597 ThiS family HPY15_00280 PF05690 Thiazole biosynthesis protein ThiG HPY15_00285 PF04055 Radical SAM superfamily HPY15_00285 PF06968 Biotin and Thiamin Synthesis associated domain HPY15_00290 PF00557 Metallopeptidase family M24 HPY15_00290 PF01321 Creatinase/Prolidase N-terminal domain HPY15_00290 PF00557 Metallopeptidase family M24 HPY15_00290 PF01321 Creatinase/Prolidase N-terminal domain HPY15_00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_00295 PF03466 LysR substrate binding domain HPY15_00300 PF07690 Major Facilitator Superfamily HPY15_00310 PF01037 Lrp/AsnC ligand binding domain HPY15_00315 PF00990 Diguanylate cyclase, GGDEF domain HPY15_00315 PF08448 PAS fold HPY15_00315 PF00563 EAL domain HPY15_00320 PF04445 Putative SAM-dependent methyltransferase HPY15_00330 PF00892 EamA-like transporter family HPY15_00335 PF00582 Universal stress protein family HPY15_00340 PF00210 Ferritin-like domain HPY15_00345 PF10625 Universal stress protein B (UspB) HPY15_00360 PF02646 RmuC family HPY15_00365 PF01209 ubiE/COQ5 methyltransferase family HPY15_00370 PF02036 SCP-2 sterol transfer family HPY15_00375 PF03109 ABC1 family HPY15_00380 PF02416 mttA/Hcf106 family HPY15_00385 PF02416 mttA/Hcf106 family HPY15_00390 PF00902 Sec-independent protein translocase protein (TatC) HPY15_00395 PF00034 Cytochrome c HPY15_00395 PF03150 Di-haem cytochrome c peroxidase HPY15_00400 PF01554 MatE HPY15_00410 PF01726 LexA DNA binding domain HPY15_00410 PF00717 Peptidase S24-like HPY15_00415 PF01553 Acyltransferase HPY15_00420 PF01040 UbiA prenyltransferase family HPY15_00425 PF04345 Chorismate lyase HPY15_00430 PF03748 Flagellar basal body-associated protein FliL HPY15_00435 PF02203 Tar ligand binding domain homologue HPY15_00435 PF00672 HAMP domain HPY15_00435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_00440 PF01694 Rhomboid family HPY15_00440 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HPY15_00445 PF00581 Rhodanese-like domain HPY15_00450 PF01026 TatD related DNase HPY15_00455 PF00490 Delta-aminolevulinic acid dehydratase HPY15_00465 PF01612 3'-5' exonuclease HPY15_00465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY15_00465 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY15_00465 PF00476 DNA polymerase family A HPY15_00470 PF01926 50S ribosome-binding GTPase HPY15_00475 PF00034 Cytochrome c HPY15_00485 PF04220 Der GTPase activator (YihI) HPY15_00490 PF10675 Protein of unknown function (DUF2489) HPY15_00495 PF04055 Radical SAM superfamily HPY15_00495 PF06969 HemN C-terminal domain HPY15_00500 PF07219 HemY protein N-terminus HPY15_00505 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HPY15_00510 PF02602 Uroporphyrinogen-III synthase HemD HPY15_00515 PF03900 Porphobilinogen deaminase, C-terminal domain HPY15_00515 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HPY15_00520 PF01295 Adenylate cyclase, class-I HPY15_00520 PF12633 Adenylate cyclase NT domain HPY15_00525 PF01491 Frataxin-like domain HPY15_00535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPY15_00535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY15_00540 PF01678 Diaminopimelate epimerase HPY15_00545 PF04340 Protein of unknown function, DUF484 HPY15_00550 PF02899 Phage integrase, N-terminal SAM-like domain HPY15_00550 PF00589 Phage integrase family HPY15_00555 PF13419 Haloacid dehalogenase-like hydrolase HPY15_00560 PF10442 FIST C domain HPY15_00560 PF00563 EAL domain HPY15_00560 PF08495 FIST N domain HPY15_00560 PF00990 Diguanylate cyclase, GGDEF domain HPY15_00580 PF12146 Serine aminopeptidase, S33 HPY15_00585 PF01810 LysE type translocator HPY15_00590 PF08668 HDOD domain HPY15_00590 PF00563 EAL domain HPY15_00595 PF00210 Ferritin-like domain HPY15_00630 PF00448 SRP54-type protein, GTPase domain HPY15_00630 PF02881 SRP54-type protein, helical bundle domain HPY15_00635 PF00005 ABC transporter HPY15_00640 PF18075 FtsX extracellular domain HPY15_00645 PF04545 Sigma-70, region 4 HPY15_00645 PF00140 Sigma-70 factor, region 1.2 HPY15_00645 PF04542 Sigma-70 region 2 HPY15_00650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY15_00650 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_00655 PF00440 Bacterial regulatory proteins, tetR family HPY15_00665 PF05958 tRNA (Uracil-5-)-methyltransferase HPY15_00670 PF07715 TonB-dependent Receptor Plug Domain HPY15_00670 PF00593 TonB dependent receptor HPY15_00675 PF01797 Transposase IS200 like HPY15_00680 PF00082 Subtilase family HPY15_00680 PF04151 Bacterial pre-peptidase C-terminal domain HPY15_00680 PF05922 Peptidase inhibitor I9 HPY15_00685 PF01177 Asp/Glu/Hydantoin racemase HPY15_00750 PF00962 Adenosine/AMP deaminase HPY15_00755 PF03707 Bacterial signalling protein N terminal repeat HPY15_00755 PF13188 PAS domain HPY15_00755 PF00990 Diguanylate cyclase, GGDEF domain HPY15_00755 PF00563 EAL domain HPY15_00760 PF00158 Sigma-54 interaction domain HPY15_00760 PF02954 Bacterial regulatory protein, Fis family HPY15_00760 PF00072 Response regulator receiver domain HPY15_00765 PF00512 His Kinase A (phospho-acceptor) domain HPY15_00765 PF00989 PAS fold HPY15_00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_00775 PF00120 Glutamine synthetase, catalytic domain HPY15_00775 PF03951 Glutamine synthetase, beta-Grasp domain HPY15_00795 PF03631 Virulence factor BrkB HPY15_00800 PF02580 D-Tyr-tRNA(Tyr) deacylase HPY15_00805 PF00583 Acetyltransferase (GNAT) family HPY15_00805 PF09500 Putative thioesterase (yiiD_Cterm) HPY15_00815 PF01293 Phosphoenolpyruvate carboxykinase HPY15_00820 PF01430 Hsp33 protein HPY15_00825 PF01479 S4 domain HPY15_00830 PF11356 Type II secretion system protein C HPY15_00835 PF03958 Bacterial type II/III secretion system short domain HPY15_00835 PF00263 Bacterial type II and III secretion system protein HPY15_00840 PF00437 Type II/IV secretion system protein HPY15_00845 PF00482 Type II secretion system (T2SS), protein F HPY15_00850 PF08334 Type II secretion system (T2SS), protein G HPY15_00850 PF07963 Prokaryotic N-terminal methylation motif HPY15_00855 PF12019 Type II transport protein GspH HPY15_00860 PF07963 Prokaryotic N-terminal methylation motif HPY15_00860 PF02501 Type II secretion system (T2SS), protein I HPY15_00865 PF11612 Type II secretion system (T2SS), protein J HPY15_00865 PF07963 Prokaryotic N-terminal methylation motif HPY15_00870 PF03934 Type II secretion system (T2SS), protein K HPY15_00875 PF05134 Type II secretion system (T2SS), protein L HPY15_00875 PF12693 GspL periplasmic domain HPY15_00880 PF04612 Type II secretion system (T2SS), protein M HPY15_00885 PF01203 Type II secretion system (T2SS), protein N HPY15_00890 PF00459 Inositol monophosphatase family HPY15_00895 PF00293 NUDIX domain HPY15_00900 PF01106 NifU-like domain HPY15_00900 PF01521 Iron-sulphur cluster biosynthesis HPY15_00905 PF00156 Phosphoribosyl transferase domain HPY15_00915 PF00561 alpha/beta hydrolase fold HPY15_00925 PF00575 S1 RNA binding domain HPY15_00925 PF09371 Tex-like protein N-terminal domain HPY15_00925 PF16921 Tex protein YqgF-like domain HPY15_00925 PF17674 HHH domain HPY15_00930 PF03449 Transcription elongation factor, N-terminal HPY15_00930 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY15_00935 PF00990 Diguanylate cyclase, GGDEF domain HPY15_00935 PF17152 Periplasmic sensor domain HPY15_00940 PF00486 Transcriptional regulatory protein, C terminal HPY15_00940 PF00072 Response regulator receiver domain HPY15_00945 PF00512 His Kinase A (phospho-acceptor) domain HPY15_00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_00945 PF00672 HAMP domain HPY15_00950 PF00860 Permease family HPY15_00955 PF17191 RecG wedge domain HPY15_00955 PF00270 DEAD/DEAH box helicase HPY15_00955 PF00271 Helicase conserved C-terminal domain HPY15_00960 PF04607 Region found in RelA / SpoT proteins HPY15_00960 PF13291 ACT domain HPY15_00960 PF02824 TGS domain HPY15_00965 PF01192 RNA polymerase Rpb6 HPY15_00970 PF00625 Guanylate kinase HPY15_00975 PF02592 Putative vitamin uptake transporter HPY15_00980 PF00474 Sodium:solute symporter family HPY15_00990 PF02080 TrkA-C domain HPY15_00990 PF00999 Sodium/hydrogen exchanger family HPY15_00990 PF03471 Transporter associated domain HPY15_00995 PF00072 Response regulator receiver domain HPY15_00995 PF00196 Bacterial regulatory proteins, luxR family HPY15_01000 PF02683 Cytochrome C biogenesis protein transmembrane region HPY15_01000 PF11412 Disulphide bond corrector protein DsbC HPY15_01005 PF18494 Pullulanase Ins domain HPY15_01005 PF17967 Pullulanase N2 domain HPY15_01005 PF03714 Bacterial pullanase-associated domain HPY15_01005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY15_01005 PF11852 Domain of unknown function (DUF3372) HPY15_01010 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY15_01015 PF10415 Fumarase C C-terminus HPY15_01015 PF00206 Lyase HPY15_01020 PF17158 Membrane-associated sensor, integral membrane domain HPY15_01020 PF00990 Diguanylate cyclase, GGDEF domain HPY15_01025 PF04186 FxsA cytoplasmic membrane protein HPY15_01030 PF00588 SpoU rRNA Methylase family HPY15_01035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY15_01035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY15_01040 PF00512 His Kinase A (phospho-acceptor) domain HPY15_01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_01040 PF00672 HAMP domain HPY15_01040 PF16527 Two-component sensor protein CpxA, periplasmic domain HPY15_01045 PF00072 Response regulator receiver domain HPY15_01045 PF00486 Transcriptional regulatory protein, C terminal HPY15_01055 PF01545 Cation efflux family HPY15_01055 PF16916 Dimerisation domain of Zinc Transporter HPY15_01060 PF00365 Phosphofructokinase HPY15_01065 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HPY15_01070 PF06005 Cell division protein ZapB HPY15_01075 PF02219 Methylenetetrahydrofolate reductase HPY15_01080 PF03447 Homoserine dehydrogenase, NAD binding domain HPY15_01080 PF00696 Amino acid kinase family HPY15_01080 PF00742 Homoserine dehydrogenase HPY15_01085 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY15_01090 PF01340 Met Apo-repressor, MetJ HPY15_01095 PF00390 Malic enzyme, N-terminal domain HPY15_01095 PF03949 Malic enzyme, NAD binding domain HPY15_01100 PF01197 Ribosomal protein L31 HPY15_01105 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPY15_01105 PF18074 Primosomal protein N C-terminal domain HPY15_01105 PF17764 3′ DNA-binding domain (3′BD) HPY15_01105 PF00270 DEAD/DEAH box helicase HPY15_01105 PF00271 Helicase conserved C-terminal domain HPY15_01110 PF00356 Bacterial regulatory proteins, lacI family HPY15_01115 PF05036 Sporulation related domain HPY15_01120 PF00227 Proteasome subunit HPY15_01125 PF00004 ATPase family associated with various cellular activities (AAA) HPY15_01125 PF10431 C-terminal, D2-small domain, of ClpB protein HPY15_01125 PF07724 AAA domain (Cdc48 subfamily) HPY15_01130 PF01040 UbiA prenyltransferase family HPY15_01135 PF03737 Aldolase/RraA HPY15_01140 PF01554 MatE HPY15_01145 PF00121 Triosephosphate isomerase HPY15_01165 PF08220 DeoR-like helix-turn-helix domain HPY15_01165 PF00455 DeoR C terminal sensor domain HPY15_01170 PF00166 Chaperonin 10 Kd subunit HPY15_01175 PF00118 TCP-1/cpn60 chaperonin family HPY15_01185 PF04055 Radical SAM superfamily HPY15_01190 PF09285 Elongation factor P, C-terminal HPY15_01190 PF08207 Elongation factor P (EF-P) KOW-like domain HPY15_01190 PF01132 Elongation factor P (EF-P) OB domain HPY15_01195 PF02313 Fumarate reductase subunit D HPY15_01200 PF02300 Fumarate reductase subunit C HPY15_01205 PF13183 4Fe-4S dicluster domain HPY15_01205 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY15_01210 PF02910 Fumarate reductase flavoprotein C-term HPY15_01210 PF00890 FAD binding domain HPY15_01215 PF00152 tRNA synthetases class II (D, K and N) HPY15_01220 PF00581 Rhodanese-like domain HPY15_01225 PF02556 Preprotein translocase subunit SecB HPY15_01230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPY15_01230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPY15_01235 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_01235 PF06426 Serine acetyltransferase, N-terminal HPY15_01245 PF00311 Phosphoenolpyruvate carboxylase HPY15_01250 PF01546 Peptidase family M20/M25/M40 HPY15_01250 PF07687 Peptidase dimerisation domain HPY15_01255 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY15_01255 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY15_01260 PF00696 Amino acid kinase family HPY15_01265 PF00764 Arginosuccinate synthase HPY15_01270 PF14698 Argininosuccinate lyase C-terminal HPY15_01270 PF00206 Lyase HPY15_01280 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_01280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY15_01285 PF00462 Glutaredoxin HPY15_01285 PF08534 Redoxin HPY15_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_01290 PF03466 LysR substrate binding domain HPY15_01295 PF00912 Transglycosylase HPY15_01295 PF17092 Penicillin-binding protein OB-like domain HPY15_01295 PF00905 Penicillin binding protein transpeptidase domain HPY15_01320 PF07660 Secretin and TonB N terminus short domain HPY15_01320 PF11741 AMIN domain HPY15_01320 PF03958 Bacterial type II/III secretion system short domain HPY15_01320 PF00263 Bacterial type II and III secretion system protein HPY15_01325 PF01202 Shikimate kinase HPY15_01330 PF01761 3-dehydroquinate synthase HPY15_01340 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPY15_01345 PF00834 Ribulose-phosphate 3 epimerase family HPY15_01350 PF13419 Haloacid dehalogenase-like hydrolase HPY15_01355 PF00579 tRNA synthetases class I (W and Y) HPY15_01370 PF00919 Uncharacterized protein family UPF0004 HPY15_01370 PF04055 Radical SAM superfamily HPY15_01370 PF18693 TRAM domain HPY15_01375 PF00117 Glutamine amidotransferase class-I HPY15_01380 PF00202 Aminotransferase class-III HPY15_01385 PF04958 Arginine N-succinyltransferase beta subunit HPY15_01390 PF00171 Aldehyde dehydrogenase family HPY15_01400 PF13545 Crp-like helix-turn-helix domain HPY15_01400 PF00027 Cyclic nucleotide-binding domain HPY15_01405 PF00485 Phosphoribulokinase / Uridine kinase family HPY15_01410 PF06794 Uncharacterised protein family (UPF0270) HPY15_01415 PF00561 alpha/beta hydrolase fold HPY15_01425 PF00005 ABC transporter HPY15_01425 PF12848 ABC transporter HPY15_01430 PF02525 Flavodoxin-like fold HPY15_01435 PF00999 Sodium/hydrogen exchanger family HPY15_01435 PF02254 TrkA-N domain HPY15_01445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY15_01450 PF01112 Asparaginase HPY15_01455 PF00709 Adenylosuccinate synthetase HPY15_01460 PF08238 Sel1 repeat HPY15_01465 PF00884 Sulfatase HPY15_01465 PF11893 Domain of unknown function (DUF3413) HPY15_01470 PF00575 S1 RNA binding domain HPY15_01470 PF00773 RNB domain HPY15_01470 PF08206 Ribonuclease B OB domain HPY15_01470 PF08461 Ribonuclease R winged-helix domain HPY15_01470 PF17876 Cold shock domain HPY15_01475 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY15_01475 PF00588 SpoU rRNA Methylase family HPY15_01480 PF00338 Ribosomal protein S10p/S20e HPY15_01485 PF00297 Ribosomal protein L3 HPY15_01490 PF00573 Ribosomal protein L4/L1 family HPY15_01495 PF00276 Ribosomal protein L23 HPY15_01500 PF00181 Ribosomal Proteins L2, RNA binding domain HPY15_01500 PF03947 Ribosomal Proteins L2, C-terminal domain HPY15_01505 PF00203 Ribosomal protein S19 HPY15_01510 PF00237 Ribosomal protein L22p/L17e HPY15_01515 PF07650 KH domain HPY15_01515 PF00189 Ribosomal protein S3, C-terminal domain HPY15_01520 PF00252 Ribosomal protein L16p/L10e HPY15_01525 PF00831 Ribosomal L29 protein HPY15_01530 PF00366 Ribosomal protein S17 HPY15_01535 PF00238 Ribosomal protein L14p/L23e HPY15_01540 PF00467 KOW motif HPY15_01540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPY15_01545 PF00281 Ribosomal protein L5 HPY15_01545 PF00673 ribosomal L5P family C-terminus HPY15_01550 PF00253 Ribosomal protein S14p/S29e HPY15_01555 PF00410 Ribosomal protein S8 HPY15_01560 PF00347 Ribosomal protein L6 HPY15_01565 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPY15_01570 PF03719 Ribosomal protein S5, C-terminal domain HPY15_01570 PF00333 Ribosomal protein S5, N-terminal domain HPY15_01575 PF00327 Ribosomal protein L30p/L7e HPY15_01580 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPY15_01585 PF00344 SecY translocase HPY15_01590 PF00444 Ribosomal protein L36 HPY15_01595 PF00416 Ribosomal protein S13/S18 HPY15_01600 PF00411 Ribosomal protein S11 HPY15_01605 PF01479 S4 domain HPY15_01605 PF00163 Ribosomal protein S4/S9 N-terminal domain HPY15_01610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPY15_01610 PF01000 RNA polymerase Rpb3/RpoA insert domain HPY15_01610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPY15_01615 PF01196 Ribosomal protein L17 HPY15_01625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY15_01625 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY15_01630 PF08525 Opacity-associated protein A N-terminal motif HPY15_01630 PF04225 Opacity-associated protein A LysM-like domain HPY15_01635 PF00892 EamA-like transporter family HPY15_01640 PF13673 Acetyltransferase (GNAT) domain HPY15_01645 PF00271 Helicase conserved C-terminal domain HPY15_01645 PF00270 DEAD/DEAH box helicase HPY15_01645 PF03880 DbpA RNA binding domain HPY15_01655 PF00149 Calcineurin-like phosphoesterase HPY15_01655 PF02872 5'-nucleotidase, C-terminal domain HPY15_01660 PF14824 Sirohaem biosynthesis protein central HPY15_01660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY15_01660 PF10414 Sirohaem synthase dimerisation region HPY15_01665 PF01507 Phosphoadenosine phosphosulfate reductase family HPY15_01670 PF00009 Elongation factor Tu GTP binding domain HPY15_01695 PF00005 ABC transporter HPY15_01705 PF10795 Protein of unknown function (DUF2607) HPY15_01710 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HPY15_01715 PF01625 Peptide methionine sulfoxide reductase HPY15_01720 PF17243 POTRA domain TamA domain 1 HPY15_01720 PF07244 Surface antigen variable number repeat HPY15_01720 PF01103 Surface antigen HPY15_01725 PF04357 TamB, inner membrane protein subunit of TAM complex HPY15_01730 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HPY15_01735 PF00719 Inorganic pyrophosphatase HPY15_01740 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HPY15_01745 PF01225 Mur ligase family, catalytic domain HPY15_01745 PF02875 Mur ligase family, glutamate ligase domain HPY15_01745 PF08245 Mur ligase middle domain HPY15_01750 PF02441 Flavoprotein HPY15_01760 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_01765 PF00005 ABC transporter HPY15_01770 PF04751 Protein of unknown function (DUF615) HPY15_01775 PF01523 Putative modulator of DNA gyrase HPY15_01780 PF00571 CBS domain HPY15_01780 PF01769 Divalent cation transporter HPY15_01780 PF03448 MgtE intracellular N domain HPY15_01785 PF00381 PTS HPr component phosphorylation site HPY15_01790 PF03668 P-loop ATPase protein family HPY15_01795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY15_01800 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY15_01805 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPY15_01805 PF04963 Sigma-54 factor, core binding domain HPY15_01805 PF04552 Sigma-54, DNA binding domain HPY15_01810 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPY15_01810 PF00005 ABC transporter HPY15_01815 PF03968 OstA-like protein HPY15_01830 PF00571 CBS domain HPY15_01830 PF01380 SIS domain HPY15_01835 PF01699 Sodium/calcium exchanger protein HPY15_01840 PF00005 ABC transporter HPY15_01845 PF02405 Permease MlaE HPY15_01850 PF02470 MlaD protein HPY15_01855 PF05494 MlaC protein HPY15_01865 PF01722 BolA-like protein HPY15_01870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY15_01875 PF01553 Acyltransferase HPY15_01880 PF01042 Endoribonuclease L-PSP HPY15_01885 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HPY15_01885 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HPY15_01890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY15_01890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY15_01895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY15_01895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY15_01900 PF13638 PIN domain HPY15_01900 PF02562 PhoH-like protein HPY15_01905 PF12137 RNA polymerase recycling family C-terminal HPY15_01905 PF18339 RapA N-terminal Tudor like domain 1 HPY15_01905 PF18337 RapA N-terminal Tudor like domain HPY15_01905 PF00271 Helicase conserved C-terminal domain HPY15_01905 PF00176 SNF2 family N-terminal domain HPY15_01910 PF00849 RNA pseudouridylate synthase HPY15_01915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY15_01915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY15_01920 PF08264 Anticodon-binding domain of tRNA HPY15_01920 PF10458 Valyl tRNA synthetase tRNA binding arm HPY15_01920 PF00133 tRNA synthetases class I (I, L, M and V) HPY15_01925 PF04364 DNA polymerase III chi subunit, HolC HPY15_01930 PF00883 Cytosol aminopeptidase family, catalytic domain HPY15_01930 PF02789 Cytosol aminopeptidase family, N-terminal domain HPY15_01935 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY15_01940 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY15_01955 PF00072 Response regulator receiver domain HPY15_02000 PF00694 Aconitase C-terminal domain HPY15_02005 PF00330 Aconitase family (aconitate hydratase) HPY15_02010 PF00180 Isocitrate/isopropylmalate dehydrogenase HPY15_02015 PF08502 LeuA allosteric (dimerisation) domain HPY15_02015 PF00682 HMGL-like HPY15_02020 PF01569 PAP2 superfamily HPY15_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_02030 PF03466 LysR substrate binding domain HPY15_02035 PF00501 AMP-binding enzyme HPY15_02040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY15_02040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY15_02040 PF00205 Thiamine pyrophosphate enzyme, central domain HPY15_02045 PF10369 Small subunit of acetolactate synthase HPY15_02050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY15_02050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY15_02050 PF01842 ACT domain HPY15_02055 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HPY15_02060 PF01812 5-formyltetrahydrofolate cyclo-ligase family HPY15_02070 PF05164 Cell division protein ZapA HPY15_02075 PF03695 Uncharacterised protein family (UPF0149) HPY15_02080 PF01494 FAD binding domain HPY15_02085 PF01494 FAD binding domain HPY15_02100 PF03937 Flavinator of succinate dehydrogenase HPY15_02110 PF02910 Fumarate reductase flavoprotein C-term HPY15_02110 PF00890 FAD binding domain HPY15_02115 PF04542 Sigma-70 region 2 HPY15_02115 PF08281 Sigma-70, region 4 HPY15_02120 PF03873 Anti sigma-E protein RseA, C-terminal domain HPY15_02120 PF03872 Anti sigma-E protein RseA, N-terminal domain HPY15_02125 PF17188 MucB/RseB C-terminal domain HPY15_02125 PF03888 MucB/RseB N-terminal domain HPY15_02135 PF00009 Elongation factor Tu GTP binding domain HPY15_02135 PF00679 Elongation factor G C-terminus HPY15_02135 PF03144 Elongation factor Tu domain 2 HPY15_02135 PF06421 GTP-binding protein LepA C-terminus HPY15_02140 PF10502 Signal peptidase, peptidase S26 HPY15_02145 PF14622 Ribonuclease-III-like HPY15_02145 PF00035 Double-stranded RNA binding motif HPY15_02150 PF01926 50S ribosome-binding GTPase HPY15_02150 PF07650 KH domain HPY15_02155 PF02565 Recombination protein O C terminal HPY15_02155 PF11967 Recombination protein O N terminal HPY15_02160 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HPY15_02165 PF01648 4'-phosphopantetheinyl transferase superfamily HPY15_02180 PF00990 Diguanylate cyclase, GGDEF domain HPY15_02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_02185 PF00512 His Kinase A (phospho-acceptor) domain HPY15_02185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY15_02185 PF00672 HAMP domain HPY15_02185 PF00072 Response regulator receiver domain HPY15_02185 PF01627 Hpt domain HPY15_02190 PF01938 TRAM domain HPY15_02190 PF05958 tRNA (Uracil-5-)-methyltransferase HPY15_02195 PF02824 TGS domain HPY15_02195 PF13291 ACT domain HPY15_02195 PF04607 Region found in RelA / SpoT proteins HPY15_02200 PF03819 MazG nucleotide pyrophosphohydrolase domain HPY15_02205 PF06418 CTP synthase N-terminus HPY15_02205 PF00117 Glutamine amidotransferase class-I HPY15_02210 PF03952 Enolase, N-terminal domain HPY15_02210 PF00113 Enolase, C-terminal TIM barrel domain HPY15_02215 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY15_02215 PF01743 Poly A polymerase head domain HPY15_02215 PF01966 HD domain HPY15_02220 PF13401 AAA domain HPY15_02220 PF01471 Putative peptidoglycan binding domain HPY15_02230 PF08239 Bacterial SH3 domain HPY15_02235 PF01384 Phosphate transporter family HPY15_02240 PF01865 Protein of unknown function DUF47 HPY15_02245 PF01928 CYTH domain HPY15_02250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_02250 PF02743 Cache domain HPY15_02250 PF00672 HAMP domain HPY15_02255 PF08335 GlnD PII-uridylyltransferase HPY15_02255 PF03710 Glutamate-ammonia ligase adenylyltransferase HPY15_02260 PF00294 pfkB family carbohydrate kinase HPY15_02260 PF01467 Cytidylyltransferase-like HPY15_02265 PF02321 Outer membrane efflux protein HPY15_02270 PF00293 NUDIX domain HPY15_02275 PF06853 Protein of unknown function (DUF1249) HPY15_02280 PF00149 Calcineurin-like phosphoesterase HPY15_02285 PF05728 Uncharacterised protein family (UPF0227) HPY15_02290 PF00204 DNA gyrase B HPY15_02290 PF00986 DNA gyrase B subunit, carboxyl terminus HPY15_02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_02290 PF01751 Toprim domain HPY15_02295 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY15_02295 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY15_02300 PF03884 DNA gyrase inhibitor YacG HPY15_02305 PF07072 Cell division protein HPY15_02310 PF01121 Dephospho-CoA kinase HPY15_02315 PF01478 Type IV leader peptidase family HPY15_02315 PF06750 Bacterial Peptidase A24 N-terminal domain HPY15_02320 PF00482 Type II secretion system (T2SS), protein F HPY15_02325 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HPY15_02325 PF00437 Type II/IV secretion system protein HPY15_02330 PF00114 Pilin (bacterial filament) HPY15_02330 PF07963 Prokaryotic N-terminal methylation motif HPY15_02335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HPY15_02335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HPY15_02340 PF01510 N-acetylmuramoyl-L-alanine amidase HPY15_02345 PF14706 Transposase DNA-binding HPY15_02345 PF01609 Transposase DDE domain HPY15_02345 PF02281 Transposase Tn5 dimerisation domain HPY15_02350 PF00258 Flavodoxin HPY15_02355 PF00589 Phage integrase family HPY15_02355 PF02899 Phage integrase, N-terminal SAM-like domain HPY15_02360 PF10411 Disulfide bond isomerase protein N-terminus HPY15_02360 PF13098 Thioredoxin-like domain HPY15_02365 PF01368 DHH family HPY15_02365 PF02272 DHHA1 domain HPY15_02365 PF17768 RecJ OB domain HPY15_02370 PF00149 Calcineurin-like phosphoesterase HPY15_02370 PF02872 5'-nucleotidase, C-terminal domain HPY15_02375 PF00392 Bacterial regulatory proteins, gntR family HPY15_02375 PF07729 FCD domain HPY15_02380 PF00456 Transketolase, thiamine diphosphate binding domain HPY15_02380 PF17831 Pyruvate dehydrogenase E1 component middle domain HPY15_02385 PF00364 Biotin-requiring enzyme HPY15_02385 PF02817 e3 binding domain HPY15_02385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY15_02390 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_02390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY15_02400 PF01795 MraW methylase family HPY15_02405 PF04999 Cell division protein FtsL HPY15_02410 PF00905 Penicillin binding protein transpeptidase domain HPY15_02410 PF03717 Penicillin-binding Protein dimerisation domain HPY15_02415 PF08245 Mur ligase middle domain HPY15_02415 PF01225 Mur ligase family, catalytic domain HPY15_02415 PF02875 Mur ligase family, glutamate ligase domain HPY15_02420 PF08245 Mur ligase middle domain HPY15_02420 PF02875 Mur ligase family, glutamate ligase domain HPY15_02420 PF01225 Mur ligase family, catalytic domain HPY15_02425 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HPY15_02425 PF00953 Glycosyl transferase family 4 HPY15_02430 PF02875 Mur ligase family, glutamate ligase domain HPY15_02430 PF08245 Mur ligase middle domain HPY15_02435 PF01098 Cell cycle protein HPY15_02440 PF04101 Glycosyltransferase family 28 C-terminal domain HPY15_02440 PF03033 Glycosyltransferase family 28 N-terminal domain HPY15_02445 PF02875 Mur ligase family, glutamate ligase domain HPY15_02445 PF08245 Mur ligase middle domain HPY15_02445 PF01225 Mur ligase family, catalytic domain HPY15_02450 PF03799 Cell division protein FtsQ HPY15_02450 PF08478 POTRA domain, FtsQ-type HPY15_02455 PF02491 SHS2 domain inserted in FTSA HPY15_02460 PF12327 FtsZ family, C-terminal domain HPY15_02460 PF00091 Tubulin/FtsZ family, GTPase domain HPY15_02465 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HPY15_02475 PF07517 SecA DEAD-like domain HPY15_02475 PF07516 SecA Wing and Scaffold domain HPY15_02475 PF01043 SecA preprotein cross-linking domain HPY15_02475 PF02810 SEC-C motif HPY15_02480 PF00293 NUDIX domain HPY15_02485 PF05173 Dihydrodipicolinate reductase, C-terminus HPY15_02485 PF01113 Dihydrodipicolinate reductase, N-terminus HPY15_02495 PF00117 Glutamine amidotransferase class-I HPY15_02495 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HPY15_02500 PF02142 MGS-like domain HPY15_02500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HPY15_02500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY15_02510 PF10137 Predicted nucleotide-binding protein containing TIR-like domain HPY15_02515 PF02281 Transposase Tn5 dimerisation domain HPY15_02515 PF14706 Transposase DNA-binding HPY15_02515 PF01609 Transposase DDE domain HPY15_02520 PF01925 Sulfite exporter TauE/SafE HPY15_02525 PF03466 LysR substrate binding domain HPY15_02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_02530 PF03458 UPF0126 domain HPY15_02535 PF01497 Periplasmic binding protein HPY15_02545 PF01048 Phosphorylase superfamily HPY15_02555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY15_02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_02560 PF00310 Glutamine amidotransferases class-II HPY15_02560 PF04898 Glutamate synthase central domain HPY15_02560 PF01645 Conserved region in glutamate synthase HPY15_02560 PF01493 GXGXG motif HPY15_02565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY15_02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_02570 PF01493 GXGXG motif HPY15_02570 PF01645 Conserved region in glutamate synthase HPY15_02570 PF04898 Glutamate synthase central domain HPY15_02570 PF00310 Glutamine amidotransferases class-II HPY15_02575 PF16199 Radical_SAM C-terminal domain HPY15_02575 PF04055 Radical SAM superfamily HPY15_02580 PF00563 EAL domain HPY15_02580 PF00360 Phytochrome region HPY15_02580 PF00990 Diguanylate cyclase, GGDEF domain HPY15_02580 PF01590 GAF domain HPY15_02585 PF18415 Histidine kinase receptor ArcB trans-membrane domain HPY15_02585 PF00072 Response regulator receiver domain HPY15_02585 PF00512 His Kinase A (phospho-acceptor) domain HPY15_02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_02585 PF00989 PAS fold HPY15_02585 PF01627 Hpt domain HPY15_02590 PF00486 Transcriptional regulatory protein, C terminal HPY15_02590 PF00072 Response regulator receiver domain HPY15_02600 PF03737 Aldolase/RraA HPY15_02615 PF00696 Amino acid kinase family HPY15_02615 PF03447 Homoserine dehydrogenase, NAD binding domain HPY15_02615 PF00742 Homoserine dehydrogenase HPY15_02615 PF13840 ACT domain HPY15_02615 PF01842 ACT domain HPY15_02620 PF00288 GHMP kinases N terminal domain HPY15_02620 PF08544 GHMP kinases C terminal HPY15_02625 PF00291 Pyridoxal-phosphate dependent enzyme HPY15_02625 PF14821 Threonine synthase N terminus HPY15_02630 PF01228 Glycine radical HPY15_02635 PF01261 Xylose isomerase-like TIM barrel HPY15_02640 PF03167 Uracil DNA glycosylase superfamily HPY15_02655 PF01235 Sodium:alanine symporter family HPY15_02660 PF03883 Peroxide stress protein YaaA HPY15_02670 PF01026 TatD related DNase HPY15_02675 PF01773 Na+ dependent nucleoside transporter N-terminus HPY15_02675 PF07662 Na+ dependent nucleoside transporter C-terminus HPY15_02675 PF07670 Nucleoside recognition HPY15_02685 PF01791 DeoC/LacD family aldolase HPY15_02690 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HPY15_02690 PF00591 Glycosyl transferase family, a/b domain HPY15_02690 PF02885 Glycosyl transferase family, helical bundle domain HPY15_02695 PF01676 Metalloenzyme superfamily HPY15_02700 PF01048 Phosphorylase superfamily HPY15_02710 PF18429 Domain of unknown function (DUF5609) HPY15_02720 PF18073 Rubredoxin metal binding domain HPY15_02725 PF00679 Elongation factor G C-terminus HPY15_02725 PF03764 Elongation factor G, domain IV HPY15_02725 PF14492 Elongation Factor G, domain II HPY15_02725 PF03144 Elongation factor Tu domain 2 HPY15_02725 PF00009 Elongation factor Tu GTP binding domain HPY15_02730 PF00501 AMP-binding enzyme HPY15_02735 PF00072 Response regulator receiver domain HPY15_02745 PF16353 Domain of unknown function(DUF4981) HPY15_02745 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HPY15_02745 PF00703 Glycosyl hydrolases family 2 HPY15_02745 PF02929 Beta galactosidase small chain HPY15_02745 PF02837 Glycosyl hydrolases family 2, sugar binding domain HPY15_02750 PF00356 Bacterial regulatory proteins, lacI family HPY15_02755 PF01588 Putative tRNA binding domain HPY15_02765 PF01544 CorA-like Mg2+ transporter protein HPY15_02770 PF18030 RimK PreATP-grasp domain HPY15_02770 PF08443 RimK-like ATP-grasp domain HPY15_02770 PF02080 TrkA-C domain HPY15_02775 PF00583 Acetyltransferase (GNAT) family HPY15_02785 PF14602 Hexapeptide repeat of succinyl-transferase HPY15_02785 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HPY15_02790 PF07130 YebG protein HPY15_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_02795 PF03466 LysR substrate binding domain HPY15_02805 PF17946 RecC C-terminal domain HPY15_02825 PF00583 Acetyltransferase (GNAT) family HPY15_02825 PF00696 Amino acid kinase family HPY15_02835 PF03562 MltA specific insert domain HPY15_02835 PF06725 3D domain HPY15_02840 PF00899 ThiF family HPY15_02845 PF02657 Fe-S metabolism associated domain HPY15_02850 PF00266 Aminotransferase class-V HPY15_02855 PF01965 DJ-1/PfpI family HPY15_02860 PF02558 Ketopantoate reductase PanE/ApbA HPY15_02860 PF08546 Ketopantoate reductase PanE/ApbA C terminal HPY15_02865 PF03502 Nucleoside-specific channel-forming protein, Tsx HPY15_02875 PF04545 Sigma-70, region 4 HPY15_02875 PF04542 Sigma-70 region 2 HPY15_02885 PF07690 Major Facilitator Superfamily HPY15_02890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY15_02900 PF05175 Methyltransferase small domain HPY15_02905 PF01722 BolA-like protein HPY15_02910 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HPY15_02910 PF11973 NQRA C-terminal domain HPY15_02915 PF03116 NQR2, RnfD, RnfE family HPY15_02920 PF04205 FMN-binding domain HPY15_02925 PF02508 Rnf-Nqr subunit, membrane protein HPY15_02930 PF02508 Rnf-Nqr subunit, membrane protein HPY15_02940 PF02424 ApbE family HPY15_02960 PF00990 Diguanylate cyclase, GGDEF domain HPY15_02960 PF17158 Membrane-associated sensor, integral membrane domain HPY15_02965 PF00209 Sodium:neurotransmitter symporter family HPY15_02975 PF18030 RimK PreATP-grasp domain HPY15_02975 PF08443 RimK-like ATP-grasp domain HPY15_02980 PF08443 RimK-like ATP-grasp domain HPY15_02980 PF18030 RimK PreATP-grasp domain HPY15_02985 PF01546 Peptidase family M20/M25/M40 HPY15_02985 PF07687 Peptidase dimerisation domain HPY15_02990 PF00860 Permease family HPY15_02995 PF00156 Phosphoribosyl transferase domain HPY15_03005 PF07417 Sigma factor-binding transcriptional regulator Crl HPY15_03010 PF00696 Amino acid kinase family HPY15_03010 PF01472 PUA domain HPY15_03015 PF00171 Aldehyde dehydrogenase family HPY15_03020 PF03477 ATP cone domain HPY15_03025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY15_03025 PF01872 RibD C-terminal domain HPY15_03030 PF00677 Lumazine binding domain HPY15_03035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY15_03035 PF00925 GTP cyclohydrolase II HPY15_03040 PF00885 6,7-dimethyl-8-ribityllumazine synthase HPY15_03045 PF01029 NusB family HPY15_03050 PF02769 AIR synthase related protein, C-terminal domain HPY15_03050 PF00586 AIR synthase related protein, N-terminal domain HPY15_03055 PF04608 Phosphatidylglycerophosphatase A HPY15_03060 PF11944 Protein of unknown function (DUF3461) HPY15_03065 PF08335 GlnD PII-uridylyltransferase HPY15_03065 PF01909 Nucleotidyltransferase domain HPY15_03065 PF01966 HD domain HPY15_03070 PF00557 Metallopeptidase family M24 HPY15_03075 PF00318 Ribosomal protein S2 HPY15_03080 PF00889 Elongation factor TS HPY15_03085 PF00696 Amino acid kinase family HPY15_03090 PF01765 Ribosome recycling factor HPY15_03095 PF01255 Putative undecaprenyl diphosphate synthase HPY15_03105 PF13288 DXP reductoisomerase C-terminal domain HPY15_03105 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPY15_03105 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPY15_03110 PF17820 PDZ domain HPY15_03110 PF02163 Peptidase family M50 HPY15_03115 PF01103 Surface antigen HPY15_03115 PF07244 Surface antigen variable number repeat HPY15_03120 PF03938 Outer membrane protein (OmpH-like) HPY15_03125 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_03125 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPY15_03130 PF07977 FabA-like domain HPY15_03135 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_03135 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HPY15_03140 PF02684 Lipid-A-disaccharide synthetase HPY15_03145 PF01351 Ribonuclease HII HPY15_03150 PF02811 PHP domain HPY15_03150 PF14579 Helix-hairpin-helix motif HPY15_03150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPY15_03150 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPY15_03150 PF01336 OB-fold nucleic acid binding domain HPY15_03155 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HPY15_03160 PF11734 TilS substrate C-terminal domain HPY15_03160 PF01171 PP-loop family HPY15_03160 PF09179 TilS substrate binding domain HPY15_03165 PF00034 Cytochrome c HPY15_03170 PF05870 Phenolic acid decarboxylase (PAD) HPY15_03175 PF00543 Nitrogen regulatory protein P-II HPY15_03180 PF03372 Endonuclease/Exonuclease/phosphatase family HPY15_03185 PF01476 LysM domain HPY15_03185 PF01464 Transglycosylase SLT domain HPY15_03190 PF00753 Metallo-beta-lactamase superfamily HPY15_03190 PF16123 Hydroxyacylglutathione hydrolase C-terminus HPY15_03195 PF08241 Methyltransferase domain HPY15_03200 PF00075 RNase H HPY15_03205 PF00929 Exonuclease HPY15_03215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY15_03215 PF02770 Acyl-CoA dehydrogenase, middle domain HPY15_03215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY15_03215 PF09317 Domain of unknown function (DUF1974) HPY15_03220 PF13580 SIS domain HPY15_03225 PF13230 Glutamine amidotransferases class-II HPY15_03230 PF00551 Formyl transferase HPY15_03235 PF02769 AIR synthase related protein, C-terminal domain HPY15_03235 PF00586 AIR synthase related protein, N-terminal domain HPY15_03245 PF00990 Diguanylate cyclase, GGDEF domain HPY15_03245 PF08448 PAS fold HPY15_03250 PF01479 S4 domain HPY15_03250 PF00849 RNA pseudouridylate synthase HPY15_03255 PF01713 Smr domain HPY15_03275 PF03173 Putative carbohydrate binding domain HPY15_03275 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY15_03275 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HPY15_03275 PF02838 Glycosyl hydrolase family 20, domain 2 HPY15_03285 PF00403 Heavy-metal-associated domain HPY15_03290 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY15_03295 PF01389 OmpA-like transmembrane domain HPY15_03295 PF00691 OmpA family HPY15_03305 PF07715 TonB-dependent Receptor Plug Domain HPY15_03310 PF04954 Siderophore-interacting protein HPY15_03310 PF08021 Siderophore-interacting FAD-binding domain HPY15_03315 PF08242 Methyltransferase domain HPY15_03315 PF00668 Condensation domain HPY15_03315 PF00501 AMP-binding enzyme HPY15_03315 PF00550 Phosphopantetheine attachment site HPY15_03350 PF01584 CheW-like domain HPY15_03350 PF00072 Response regulator receiver domain HPY15_03355 PF01739 CheR methyltransferase, SAM binding domain HPY15_03355 PF03705 CheR methyltransferase, all-alpha domain HPY15_03360 PF00460 Flagella basal body rod protein HPY15_03365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY15_03365 PF00460 Flagella basal body rod protein HPY15_03370 PF13860 FlgD Ig-like domain HPY15_03370 PF03963 Flagellar hook capping protein - N-terminal region HPY15_03370 PF13861 FlgD Tudor-like domain HPY15_03375 PF00460 Flagella basal body rod protein HPY15_03375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY15_03375 PF07559 Flagellar basal body protein FlaE HPY15_03380 PF00460 Flagella basal body rod protein HPY15_03380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY15_03385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY15_03385 PF00460 Flagella basal body rod protein HPY15_03390 PF02107 Flagellar L-ring protein HPY15_03395 PF02119 Flagellar P-ring protein HPY15_03400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HPY15_03400 PF10135 Rod binding protein HPY15_03405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY15_03405 PF07196 Flagellin hook IN motif HPY15_03415 PF07196 Flagellin hook IN motif HPY15_03415 PF00669 Bacterial flagellin N-terminal helical region HPY15_03415 PF00700 Bacterial flagellin C-terminal helical region HPY15_03420 PF00700 Bacterial flagellin C-terminal helical region HPY15_03420 PF07196 Flagellin hook IN motif HPY15_03420 PF00669 Bacterial flagellin N-terminal helical region HPY15_03505 PF06071 Protein of unknown function (DUF933) HPY15_03505 PF01926 50S ribosome-binding GTPase HPY15_03510 PF01195 Peptidyl-tRNA hydrolase HPY15_03515 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPY15_03515 PF14572 Phosphoribosyl synthetase-associated domain HPY15_03520 PF00288 GHMP kinases N terminal domain HPY15_03520 PF08544 GHMP kinases C terminal HPY15_03525 PF03550 Outer membrane lipoprotein LolB HPY15_03530 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HPY15_03530 PF01488 Shikimate / quinate 5-dehydrogenase HPY15_03530 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HPY15_03535 PF03462 PCRF domain HPY15_03535 PF00472 RF-1 domain HPY15_03540 PF17827 PrmC N-terminal domain HPY15_03540 PF13847 Methyltransferase domain HPY15_03545 PF04247 Invasion gene expression up-regulator, SirB HPY15_03550 PF13369 Transglutaminase-like superfamily HPY15_03555 PF00793 DAHP synthetase I family HPY15_03560 PF00149 Calcineurin-like phosphoesterase HPY15_03560 PF02872 5'-nucleotidase, C-terminal domain HPY15_03565 PF04073 Aminoacyl-tRNA editing domain HPY15_03570 PF00860 Permease family HPY15_03585 PF01797 Transposase IS200 like HPY15_03595 PF03358 NADPH-dependent FMN reductase HPY15_03600 PF03960 ArsC family HPY15_03605 PF01435 Peptidase family M48 HPY15_03605 PF13181 Tetratricopeptide repeat HPY15_03615 PF01594 AI-2E family transporter HPY15_03620 PF00672 HAMP domain HPY15_03620 PF02743 Cache domain HPY15_03620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_03625 PF00578 AhpC/TSA family HPY15_03635 PF00701 Dihydrodipicolinate synthetase family HPY15_03640 PF06804 NlpB/DapX lipoprotein HPY15_03650 PF02557 D-alanyl-D-alanine carboxypeptidase HPY15_03655 PF07687 Peptidase dimerisation domain HPY15_03655 PF01546 Peptidase family M20/M25/M40 HPY15_03660 PF03960 ArsC family HPY15_03680 PF04261 Dyp-type peroxidase family HPY15_03685 PF00700 Bacterial flagellin C-terminal helical region HPY15_03685 PF07196 Flagellin hook IN motif HPY15_03685 PF00669 Bacterial flagellin N-terminal helical region HPY15_03690 PF07196 Flagellin hook IN motif HPY15_03690 PF00700 Bacterial flagellin C-terminal helical region HPY15_03690 PF00669 Bacterial flagellin N-terminal helical region HPY15_03695 PF00700 Bacterial flagellin C-terminal helical region HPY15_03695 PF00669 Bacterial flagellin N-terminal helical region HPY15_03695 PF07196 Flagellin hook IN motif HPY15_03700 PF03646 FlaG protein HPY15_03705 PF07195 Flagellar hook-associated protein 2 C-terminus HPY15_03705 PF02465 Flagellar hook-associated protein 2 N-terminus HPY15_03705 PF07196 Flagellin hook IN motif HPY15_03715 PF02561 Flagellar protein FliS HPY15_03720 PF02954 Bacterial regulatory protein, Fis family HPY15_03720 PF00158 Sigma-54 interaction domain HPY15_03720 PF06490 Flagellar regulatory protein FleQ HPY15_03725 PF00512 His Kinase A (phospho-acceptor) domain HPY15_03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_03725 PF00989 PAS fold HPY15_03725 PF13493 Domain of unknown function (DUF4118) HPY15_03725 PF13426 PAS domain HPY15_03725 PF08447 PAS fold HPY15_03730 PF00158 Sigma-54 interaction domain HPY15_03730 PF00072 Response regulator receiver domain HPY15_03730 PF02954 Bacterial regulatory protein, Fis family HPY15_03735 PF02049 Flagellar hook-basal body complex protein FliE HPY15_03740 PF08345 Flagellar M-ring protein C-terminal HPY15_03740 PF01514 Secretory protein of YscJ/FliF family HPY15_03745 PF14841 FliG middle domain HPY15_03745 PF01706 FliG C-terminal domain HPY15_03745 PF14842 FliG N-terminal domain HPY15_03750 PF02108 Flagellar assembly protein FliH HPY15_03755 PF18269 T3SS EscN ATPase C-terminal domain HPY15_03755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY15_03775 PF03748 Flagellar basal body-associated protein FliL HPY15_03780 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY15_03780 PF02154 Flagellar motor switch protein FliM HPY15_03785 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY15_03790 PF04347 Flagellar biosynthesis protein, FliO HPY15_03795 PF00813 FliP family HPY15_03800 PF01313 Bacterial export proteins, family 3 HPY15_03805 PF01311 Bacterial export proteins, family 1 HPY15_03810 PF01312 FlhB HrpN YscU SpaS Family HPY15_03815 PF01713 Smr domain HPY15_03820 PF05175 Methyltransferase small domain HPY15_03825 PF01264 Chorismate synthase HPY15_03830 PF03458 UPF0126 domain HPY15_03835 PF04315 Elongation factor P hydroxylase HPY15_03840 PF08891 YfcL protein HPY15_03845 PF03358 NADPH-dependent FMN reductase HPY15_03850 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HPY15_03850 PF01266 FAD dependent oxidoreductase HPY15_03855 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY15_03855 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY15_03860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY15_03860 PF11890 Domain of unknown function (DUF3410) HPY15_03860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY15_03865 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY15_03865 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY15_03870 PF01475 Ferric uptake regulator family HPY15_03880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_03880 PF03466 LysR substrate binding domain HPY15_03885 PF03788 LrgA family HPY15_03890 PF04172 LrgB-like family HPY15_03895 PF00258 Flavodoxin HPY15_03905 PF12697 Alpha/beta hydrolase family HPY15_03910 PF17206 SeqA protein N-terminal domain HPY15_03910 PF03925 SeqA protein C-terminal domain HPY15_03915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY15_03915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY15_03915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY15_03915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY15_03925 PF01784 NIF3 (NGG1p interacting factor 3) HPY15_03930 PF00285 Citrate synthase, C-terminal domain HPY15_03935 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY15_03940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY15_03945 PF02910 Fumarate reductase flavoprotein C-term HPY15_03945 PF00890 FAD binding domain HPY15_03950 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY15_03955 PF00676 Dehydrogenase E1 component HPY15_03955 PF16078 2-oxoglutarate dehydrogenase N-terminus HPY15_03955 PF02779 Transketolase, pyrimidine binding domain HPY15_03955 PF16870 2-oxoglutarate dehydrogenase C-terminal HPY15_03960 PF00364 Biotin-requiring enzyme HPY15_03960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY15_03960 PF02817 e3 binding domain HPY15_03965 PF00549 CoA-ligase HPY15_03965 PF08442 ATP-grasp domain HPY15_03970 PF02629 CoA binding domain HPY15_03970 PF00549 CoA-ligase HPY15_03975 PF00950 ABC 3 transport family HPY15_03980 PF00005 ABC transporter HPY15_03985 PF01297 Zinc-uptake complex component A periplasmic HPY15_03990 PF02311 AraC-like ligand binding domain HPY15_03990 PF12833 Helix-turn-helix domain HPY15_03995 PF04023 FeoA domain HPY15_04000 PF07670 Nucleoside recognition HPY15_04000 PF07664 Ferrous iron transport protein B C terminus HPY15_04000 PF02421 Ferrous iron transport protein B HPY15_04015 PF03485 Arginyl tRNA synthetase N terminal domain HPY15_04015 PF00750 tRNA synthetases class I (R) HPY15_04015 PF05746 DALR anticodon binding domain HPY15_04025 PF00675 Insulinase (Peptidase family M16) HPY15_04025 PF05193 Peptidase M16 inactive domain HPY15_04030 PF00300 Histidine phosphatase superfamily (branch 1) HPY15_04035 PF00771 FHIPEP family HPY15_04040 PF00448 SRP54-type protein, GTPase domain HPY15_04045 PF10609 NUBPL iron-transfer P-loop NTPase HPY15_04050 PF04545 Sigma-70, region 4 HPY15_04050 PF04539 Sigma-70 region 3 HPY15_04050 PF04542 Sigma-70 region 2 HPY15_04055 PF00072 Response regulator receiver domain HPY15_04060 PF04344 Chemotaxis phosphatase, CheZ HPY15_04065 PF01584 CheW-like domain HPY15_04065 PF02895 Signal transducing histidine kinase, homodimeric domain HPY15_04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_04065 PF01627 Hpt domain HPY15_04065 PF00072 Response regulator receiver domain HPY15_04070 PF01339 CheB methylesterase HPY15_04070 PF00072 Response regulator receiver domain HPY15_04075 PF13614 AAA domain HPY15_04085 PF01584 CheW-like domain HPY15_04095 PF00005 ABC transporter HPY15_04100 PF03379 CcmB protein HPY15_04105 PF01578 Cytochrome C assembly protein HPY15_04110 PF04995 Heme exporter protein D (CcmD) HPY15_04115 PF03100 CcmE HPY15_04120 PF01578 Cytochrome C assembly protein HPY15_04120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HPY15_04125 PF08534 Redoxin HPY15_04130 PF03918 Cytochrome C biogenesis protein HPY15_04140 PF04333 MlaA lipoprotein HPY15_04155 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY15_04155 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY15_04160 PF00462 Glutaredoxin HPY15_04165 PF01131 DNA topoisomerase HPY15_04165 PF01751 Toprim domain HPY15_04170 PF00850 Histone deacetylase domain HPY15_04185 PF00884 Sulfatase HPY15_04185 PF11893 Domain of unknown function (DUF3413) HPY15_04190 PF07208 Protein of unknown function (DUF1414) HPY15_04195 PF04245 37-kD nucleoid-associated bacterial protein HPY15_04205 PF03553 Na+/H+ antiporter family HPY15_04210 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY15_04210 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY15_04215 PF01914 MarC family integral membrane protein HPY15_04220 PF00465 Iron-containing alcohol dehydrogenase HPY15_04220 PF00171 Aldehyde dehydrogenase family HPY15_04230 PF00916 Sulfate permease family HPY15_04230 PF01740 STAS domain HPY15_04235 PF12111 Polyribonucleotide phosphorylase C terminal HPY15_04235 PF00575 S1 RNA binding domain HPY15_04235 PF10150 Ribonuclease E/G family HPY15_04240 PF01479 S4 domain HPY15_04240 PF00849 RNA pseudouridylate synthase HPY15_04245 PF02545 Maf-like protein HPY15_04250 PF02620 Large ribosomal RNA subunit accumulation protein YceD HPY15_04255 PF01783 Ribosomal L32p protein family HPY15_04260 PF02504 Fatty acid synthesis protein HPY15_04265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY15_04265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY15_04270 PF00698 Acyl transferase domain HPY15_04280 PF00550 Phosphopantetheine attachment site HPY15_04285 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY15_04285 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY15_04290 PF01063 Amino-transferase class IV HPY15_04295 PF02618 YceG-like family HPY15_04300 PF02223 Thymidylate kinase HPY15_04305 PF09115 DNA polymerase III, delta subunit, C terminal HPY15_04310 PF01026 TatD related DNase HPY15_04315 PF02378 Phosphotransferase system, EIIC HPY15_04315 PF00367 phosphotransferase system, EIIB HPY15_04325 PF00209 Sodium:neurotransmitter symporter family HPY15_04340 PF01734 Patatin-like phospholipase HPY15_04345 PF00224 Pyruvate kinase, barrel domain HPY15_04345 PF02887 Pyruvate kinase, alpha/beta domain HPY15_04350 PF00480 ROK family HPY15_04355 PF00072 Response regulator receiver domain HPY15_04355 PF01584 CheW-like domain HPY15_04370 PF13847 Methyltransferase domain HPY15_04380 PF01263 Aldose 1-epimerase HPY15_04385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY15_04385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY15_04390 PF01641 SelR domain HPY15_04400 PF07023 Protein of unknown function (DUF1315) HPY15_04405 PF17763 Glutaminase/Asparaginase C-terminal domain HPY15_04405 PF00710 Asparaginase, N-terminal HPY15_04410 PF01343 Peptidase family S49 HPY15_04415 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_04415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY15_04420 PF00551 Formyl transferase HPY15_04420 PF01842 ACT domain HPY15_04430 PF13307 Helicase C-terminal domain HPY15_04430 PF04851 Type III restriction enzyme, res subunit HPY15_04435 PF00814 Glycoprotease family HPY15_04450 PF00561 alpha/beta hydrolase fold HPY15_04455 PF00501 AMP-binding enzyme HPY15_04455 PF13193 AMP-binding enzyme C-terminal domain HPY15_04460 PF01612 3'-5' exonuclease HPY15_04460 PF00570 HRDC domain HPY15_04480 PF01966 HD domain HPY15_04480 PF13286 Phosphohydrolase-associated domain HPY15_04490 PF00155 Aminotransferase class I and II HPY15_04495 PF00425 chorismate binding enzyme HPY15_04500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY15_04500 PF16582 Middle domain of thiamine pyrophosphate HPY15_04500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY15_04505 PF12697 Alpha/beta hydrolase family HPY15_04510 PF00378 Enoyl-CoA hydratase/isomerase HPY15_04515 PF13378 Enolase C-terminal domain-like HPY15_04520 PF13193 AMP-binding enzyme C-terminal domain HPY15_04520 PF00501 AMP-binding enzyme HPY15_04525 PF03594 Benzoate membrane transport protein HPY15_04530 PF07690 Major Facilitator Superfamily HPY15_04550 PF04170 NlpE N-terminal domain HPY15_04555 PF03776 Septum formation topological specificity factor MinE HPY15_04560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY15_04565 PF03775 Septum formation inhibitor MinC, C-terminal domain HPY15_04565 PF05209 Septum formation inhibitor MinC, N-terminal domain HPY15_04570 PF05166 YcgL domain HPY15_04575 PF13406 Transglycosylase SLT domain HPY15_04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_04580 PF03466 LysR substrate binding domain HPY15_04585 PF07670 Nucleoside recognition HPY15_04585 PF07662 Na+ dependent nucleoside transporter C-terminus HPY15_04585 PF01773 Na+ dependent nucleoside transporter N-terminus HPY15_04590 PF00704 Glycosyl hydrolases family 18 HPY15_04595 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY15_04600 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY15_04600 PF01568 Molydopterin dinucleotide binding domain HPY15_04600 PF00384 Molybdopterin oxidoreductase HPY15_04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_04610 PF03466 LysR substrate binding domain HPY15_04615 PF01494 FAD binding domain HPY15_04620 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HPY15_04625 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPY15_04625 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPY15_04670 PF13188 PAS domain HPY15_04670 PF03707 Bacterial signalling protein N terminal repeat HPY15_04670 PF00563 EAL domain HPY15_04670 PF00990 Diguanylate cyclase, GGDEF domain HPY15_04680 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HPY15_04685 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY15_04690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY15_04695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY15_04700 PF02954 Bacterial regulatory protein, Fis family HPY15_04700 PF00158 Sigma-54 interaction domain HPY15_04700 PF00072 Response regulator receiver domain HPY15_04705 PF00512 His Kinase A (phospho-acceptor) domain HPY15_04705 PF02743 Cache domain HPY15_04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_04715 PF05698 Bacterial trigger factor protein (TF) C-terminus HPY15_04715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY15_04715 PF05697 Bacterial trigger factor protein (TF) HPY15_04720 PF00574 Clp protease HPY15_04725 PF07724 AAA domain (Cdc48 subfamily) HPY15_04725 PF06689 ClpX C4-type zinc finger HPY15_04725 PF10431 C-terminal, D2-small domain, of ClpB protein HPY15_04730 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY15_04730 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPY15_04730 PF00004 ATPase family associated with various cellular activities (AAA) HPY15_04735 PF00216 Bacterial DNA-binding protein HPY15_04740 PF13145 PPIC-type PPIASE domain HPY15_04750 PF02224 Cytidylate kinase HPY15_04755 PF00575 S1 RNA binding domain HPY15_04760 PF00216 Bacterial DNA-binding protein HPY15_04765 PF06305 Lipopolysaccharide assembly protein A domain HPY15_04770 PF18073 Rubredoxin metal binding domain HPY15_04775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY15_04780 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HPY15_04790 PF03466 LysR substrate binding domain HPY15_04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_04800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY15_04800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY15_04805 PF01037 Lrp/AsnC ligand binding domain HPY15_04810 PF01580 FtsK/SpoIIIE family HPY15_04810 PF09397 Ftsk gamma domain HPY15_04810 PF17854 FtsK alpha domain HPY15_04810 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HPY15_04815 PF02600 Disulfide bond formation protein DsbB HPY15_04820 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HPY15_04825 PF00392 Bacterial regulatory proteins, gntR family HPY15_04825 PF07840 FadR C-terminal domain HPY15_04835 PF00672 HAMP domain HPY15_04835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_04840 PF01230 HIT domain HPY15_04855 PF13036 Peptidoglycan-synthase activator LpoB HPY15_04855 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HPY15_04865 PF05728 Uncharacterised protein family (UPF0227) HPY15_04870 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_04880 PF12563 Hemolytic toxin N terminal HPY15_04880 PF16458 Beta-prism lectin HPY15_04880 PF07968 Leukocidin/Hemolysin toxin family HPY15_04890 PF00271 Helicase conserved C-terminal domain HPY15_04890 PF00270 DEAD/DEAH box helicase HPY15_04890 PF02559 CarD-like/TRCF domain HPY15_04890 PF17757 UvrB interaction domain HPY15_04890 PF03461 TRCF domain HPY15_04900 PF12704 MacB-like periplasmic core domain HPY15_04900 PF02687 FtsX-like permease family HPY15_04905 PF00005 ABC transporter HPY15_04910 PF02687 FtsX-like permease family HPY15_04910 PF12704 MacB-like periplasmic core domain HPY15_04920 PF03772 Competence protein HPY15_04920 PF00753 Metallo-beta-lactamase superfamily HPY15_04920 PF13567 Domain of unknown function (DUF4131) HPY15_04925 PF00005 ABC transporter HPY15_04925 PF00664 ABC transporter transmembrane region HPY15_04930 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HPY15_04935 PF03966 Trm112p-like protein HPY15_04940 PF02348 Cytidylyltransferase HPY15_04945 PF04293 SpoVR like protein HPY15_04950 PF04285 Protein of unknown function (DUF444) HPY15_04955 PF08298 PrkA AAA domain HPY15_04955 PF06798 PrkA serine protein kinase C-terminal domain HPY15_04960 PF03887 YfbU domain HPY15_04970 PF04055 Radical SAM superfamily HPY15_04975 PF00672 HAMP domain HPY15_04975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_04975 PF12729 Four helix bundle sensory module for signal transduction HPY15_04985 PF02901 Pyruvate formate lyase-like HPY15_04985 PF01228 Glycine radical HPY15_04995 PF00005 ABC transporter HPY15_05000 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_05005 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_05010 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_05015 PF03372 Endonuclease/Exonuclease/phosphatase family HPY15_05020 PF00672 HAMP domain HPY15_05020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_05025 PF10689 Protein of unknown function (DUF2496) HPY15_05030 PF07445 Primosomal replication protein priC HPY15_05035 PF01925 Sulfite exporter TauE/SafE HPY15_05040 PF13307 Helicase C-terminal domain HPY15_05040 PF06733 DEAD_2 HPY15_05045 PF13609 Gram-negative porin HPY15_05050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY15_05055 PF02810 SEC-C motif HPY15_05060 PF00563 EAL domain HPY15_05060 PF08668 HDOD domain HPY15_05065 PF00149 Calcineurin-like phosphoesterase HPY15_05070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY15_05075 PF09190 DALR domain HPY15_05075 PF01406 tRNA synthetases class I (C) catalytic domain HPY15_05080 PF02075 Crossover junction endodeoxyribonuclease RuvC HPY15_05085 PF07499 RuvA, C-terminal domain HPY15_05085 PF01330 RuvA N terminal domain HPY15_05090 PF05491 RuvB C-terminal winged helix domain HPY15_05090 PF17864 RuvB AAA lid domain HPY15_05090 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPY15_05095 PF01654 Cytochrome bd terminal oxidase subunit I HPY15_05100 PF02322 Cytochrome bd terminal oxidase subunit II HPY15_05105 PF08173 Membrane bound YbgT-like protein HPY15_05110 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HPY15_05115 PF03061 Thioesterase superfamily HPY15_05120 PF01618 MotA/TolQ/ExbB proton channel family HPY15_05125 PF02472 Biopolymer transport protein ExbD/TolR HPY15_05135 PF04052 TolB amino-terminal domain HPY15_05135 PF07676 WD40-like Beta Propeller Repeat HPY15_05140 PF00691 OmpA family HPY15_05150 PF02445 Quinolinate synthetase A protein HPY15_05160 PF09308 LuxQ, periplasmic HPY15_05160 PF00072 Response regulator receiver domain HPY15_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_05160 PF00512 His Kinase A (phospho-acceptor) domain HPY15_05165 PF06610 L-alanine exporter HPY15_05170 PF00171 Aldehyde dehydrogenase family HPY15_05175 PF02954 Bacterial regulatory protein, Fis family HPY15_05175 PF00158 Sigma-54 interaction domain HPY15_05175 PF01590 GAF domain HPY15_05180 PF09905 DNA-binding protein VF530 HPY15_05190 PF03441 FAD binding domain of DNA photolyase HPY15_05190 PF00875 DNA photolyase HPY15_05200 PF13426 PAS domain HPY15_05200 PF00990 Diguanylate cyclase, GGDEF domain HPY15_05200 PF00563 EAL domain HPY15_05215 PF12102 Domain of unknown function (DUF3578) HPY15_05215 PF07728 AAA domain (dynein-related subfamily) HPY15_05250 PF13088 BNR repeat-like domain HPY15_05250 PF09264 Vibrio cholerae sialidase, lectin insertion HPY15_05255 PF01979 Amidohydrolase family HPY15_05260 PF00480 ROK family HPY15_05265 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HPY15_05270 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY15_05275 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY15_05280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY15_05285 PF00701 Dihydrodipicolinate synthetase family HPY15_05290 PF01380 SIS domain HPY15_05290 PF01418 Helix-turn-helix domain, rpiR family HPY15_05295 PF01344 Kelch motif HPY15_05300 PF07646 Kelch motif HPY15_05310 PF02368 Bacterial Ig-like domain (group 2) HPY15_05310 PF11999 Protein of unknown function (DUF3494) HPY15_05335 PF00561 alpha/beta hydrolase fold HPY15_05340 PF03347 Vibrio thermostable direct hemolysin HPY15_05345 PF13322 Domain of unknown function (DUF4092) HPY15_05345 PF17291 N-terminal domain of M60-like peptidases HPY15_05345 PF13402 Peptidase M60, enhancin and enhancin-like HPY15_05450 PF00771 FHIPEP family HPY15_05455 PF01312 FlhB HrpN YscU SpaS Family HPY15_05460 PF00691 OmpA family HPY15_05485 PF00486 Transcriptional regulatory protein, C terminal HPY15_05500 PF00813 FliP family HPY15_05515 PF00263 Bacterial type II and III secretion system protein HPY15_05515 PF03958 Bacterial type II/III secretion system short domain HPY15_05520 PF18269 T3SS EscN ATPase C-terminal domain HPY15_05520 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY15_05520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY15_05565 PF03545 Yersinia virulence determinant (YopE) HPY15_05565 PF09020 YopE, N terminal HPY15_05580 PF13737 Transposase DDE domain HPY15_05590 PF13356 Arm DNA-binding domain HPY15_05590 PF00589 Phage integrase family HPY15_05600 PF00873 AcrB/AcrD/AcrF family HPY15_05605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY15_05615 PF02470 MlaD protein HPY15_05620 PF04403 Paraquat-inducible protein A HPY15_05625 PF08362 YcdC-like protein, C-terminal region HPY15_05625 PF00440 Bacterial regulatory proteins, tetR family HPY15_05630 PF00171 Aldehyde dehydrogenase family HPY15_05635 PF07383 Protein of unknown function (DUF1496) HPY15_05645 PF00440 Bacterial regulatory proteins, tetR family HPY15_05645 PF16295 Tetracyclin repressor-like, C-terminal domain HPY15_05650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY15_05650 PF02770 Acyl-CoA dehydrogenase, middle domain HPY15_05650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY15_05650 PF09317 Domain of unknown function (DUF1974) HPY15_05655 PF07055 Enoyl reductase FAD binding domain HPY15_05655 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY15_05655 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY15_05660 PF01176 Translation initiation factor 1A / IF-1 HPY15_05665 PF04376 Arginine-tRNA-protein transferase, N terminus HPY15_05665 PF04377 Arginine-tRNA-protein transferase, C terminus HPY15_05670 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HPY15_05675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY15_05680 PF10692 Protein of unknown function (DUF2498) HPY15_05685 PF08272 Topoisomerase I zinc-ribbon-like HPY15_05685 PF01131 DNA topoisomerase HPY15_05685 PF01751 Toprim domain HPY15_05685 PF01396 Topoisomerase DNA binding C4 zinc finger HPY15_05690 PF00483 Nucleotidyl transferase HPY15_05695 PF08323 Starch synthase catalytic domain HPY15_05695 PF00534 Glycosyl transferases group 1 HPY15_05715 PF04994 TfoX C-terminal domain HPY15_05715 PF04993 TfoX N-terminal domain HPY15_05720 PF00356 Bacterial regulatory proteins, lacI family HPY15_05725 PF02613 Nitrate reductase delta subunit HPY15_05730 PF00486 Transcriptional regulatory protein, C terminal HPY15_05730 PF00072 Response regulator receiver domain HPY15_05735 PF02698 DUF218 domain HPY15_05740 PF13847 Methyltransferase domain HPY15_05745 PF17193 MukF C-terminal domain HPY15_05745 PF03882 MukF winged-helix domain HPY15_05745 PF17192 MukF middle domain HPY15_05750 PF04288 MukE-like family HPY15_05755 PF04310 MukB N-terminal HPY15_05755 PF16330 MukB hinge domain HPY15_05760 PF01037 Lrp/AsnC ligand binding domain HPY15_05765 PF01810 LysE type translocator HPY15_05770 PF11842 Domain of unknown function (DUF3362) HPY15_05770 PF04055 Radical SAM superfamily HPY15_05770 PF08497 Radical SAM N-terminal HPY15_05775 PF08448 PAS fold HPY15_05775 PF08447 PAS fold HPY15_05775 PF00990 Diguanylate cyclase, GGDEF domain HPY15_05775 PF00563 EAL domain HPY15_05780 PF00675 Insulinase (Peptidase family M16) HPY15_05780 PF05193 Peptidase M16 inactive domain HPY15_05795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_05795 PF03466 LysR substrate binding domain HPY15_05800 PF08267 Cobalamin-independent synthase, N-terminal domain HPY15_05800 PF01717 Cobalamin-independent synthase, Catalytic domain HPY15_05810 PF03795 YCII-related domain HPY15_05815 PF03061 Thioesterase superfamily HPY15_05820 PF04279 Intracellular septation protein A HPY15_05830 PF02698 DUF218 domain HPY15_05835 PF01370 NAD dependent epimerase/dehydratase family HPY15_05845 PF01226 Formate/nitrite transporter HPY15_05850 PF06796 Periplasmic nitrate reductase protein NapE HPY15_05855 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY15_05860 PF01568 Molydopterin dinucleotide binding domain HPY15_05860 PF00384 Molybdopterin oxidoreductase HPY15_05860 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY15_05875 PF01368 DHH family HPY15_05875 PF02833 DHHA2 domain HPY15_05890 PF00005 ABC transporter HPY15_05895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_05895 PF00005 ABC transporter HPY15_05900 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY15_05900 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_05905 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_05910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY15_05915 PF00158 Sigma-54 interaction domain HPY15_05915 PF02954 Bacterial regulatory protein, Fis family HPY15_05920 PF04012 PspA/IM30 family HPY15_05935 PF00529 HlyD membrane-fusion protein of T1SS HPY15_05935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY15_05940 PF13533 Biotin-lipoyl like HPY15_05945 PF00873 AcrB/AcrD/AcrF family HPY15_05950 PF03352 Methyladenine glycosylase HPY15_05955 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY15_05960 PF13091 PLD-like domain HPY15_05960 PF13396 Phospholipase_D-nuclease N-terminal HPY15_05965 PF00209 Sodium:neurotransmitter symporter family HPY15_05970 PF00849 RNA pseudouridylate synthase HPY15_05975 PF01066 CDP-alcohol phosphatidyltransferase HPY15_05980 PF00005 ABC transporter HPY15_05985 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_05990 PF13416 Bacterial extracellular solute-binding protein HPY15_06000 PF06945 Protein of unknown function (DUF1289) HPY15_06015 PF00005 ABC transporter HPY15_06020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY15_06025 PF03222 Tryptophan/tyrosine permease family HPY15_06035 PF00571 CBS domain HPY15_06035 PF03448 MgtE intracellular N domain HPY15_06035 PF01769 Divalent cation transporter HPY15_06040 PF09308 LuxQ, periplasmic HPY15_06040 PF00072 Response regulator receiver domain HPY15_06040 PF00512 His Kinase A (phospho-acceptor) domain HPY15_06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_06045 PF03707 Bacterial signalling protein N terminal repeat HPY15_06045 PF00990 Diguanylate cyclase, GGDEF domain HPY15_06045 PF00563 EAL domain HPY15_06055 PF04151 Bacterial pre-peptidase C-terminal domain HPY15_06055 PF08453 Peptidase family M9 N-terminal HPY15_06055 PF01752 Collagenase HPY15_06065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY15_06065 PF12793 Sugar transport-related sRNA regulator N-term HPY15_06080 PF09101 Exotoxin A binding HPY15_06080 PF09009 Exotoxin A catalytic HPY15_06080 PF09102 Exotoxin A, targeting HPY15_06090 PF00672 HAMP domain HPY15_06090 PF12729 Four helix bundle sensory module for signal transduction HPY15_06090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_06100 PF00360 Phytochrome region HPY15_06100 PF00990 Diguanylate cyclase, GGDEF domain HPY15_06100 PF01590 GAF domain HPY15_06100 PF00563 EAL domain HPY15_06105 PF01386 Ribosomal L25p family HPY15_06115 PF00486 Transcriptional regulatory protein, C terminal HPY15_06115 PF00072 Response regulator receiver domain HPY15_06125 PF04851 Type III restriction enzyme, res subunit HPY15_06125 PF00271 Helicase conserved C-terminal domain HPY15_06130 PF00849 RNA pseudouridylate synthase HPY15_06130 PF01479 S4 domain HPY15_06135 PF07690 Major Facilitator Superfamily HPY15_06145 PF11066 Protein of unknown function (DUF2867) HPY15_06145 PF13460 NAD(P)H-binding HPY15_06150 PF01554 MatE HPY15_06155 PF00005 ABC transporter HPY15_06170 PF06965 Na+/H+ antiporter 1 HPY15_06175 PF00202 Aminotransferase class-III HPY15_06180 PF03435 Saccharopine dehydrogenase NADP binding domain HPY15_06180 PF16653 Saccharopine dehydrogenase C-terminal domain HPY15_06190 PF05736 OprF membrane domain HPY15_06190 PF00691 OmpA family HPY15_06195 PF02321 Outer membrane efflux protein HPY15_06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_06215 PF03466 LysR substrate binding domain HPY15_06225 PF01863 Protein of unknown function DUF45 HPY15_06230 PF05971 RNA methyltransferase HPY15_06245 PF04204 Homoserine O-succinyltransferase HPY15_06265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY15_06280 PF00989 PAS fold HPY15_06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_06280 PF17203 Single cache domain 3 HPY15_06280 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HPY15_06285 PF12431 Transcriptional regulator HPY15_06285 PF00072 Response regulator receiver domain HPY15_06295 PF01584 CheW-like domain HPY15_06295 PF00072 Response regulator receiver domain HPY15_06315 PF00990 Diguanylate cyclase, GGDEF domain HPY15_06315 PF00072 Response regulator receiver domain HPY15_06335 PF07690 Major Facilitator Superfamily HPY15_06340 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HPY15_06340 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HPY15_06345 PF00288 GHMP kinases N terminal domain HPY15_06345 PF08544 GHMP kinases C terminal HPY15_06345 PF10509 Galactokinase galactose-binding signature HPY15_06350 PF01263 Aldose 1-epimerase HPY15_06355 PF00990 Diguanylate cyclase, GGDEF domain HPY15_06360 PF00672 HAMP domain HPY15_06360 PF00990 Diguanylate cyclase, GGDEF domain HPY15_06360 PF17154 Gammaproteobacterial periplasmic sensor domain HPY15_06360 PF00563 EAL domain HPY15_06370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY15_06370 PF00205 Thiamine pyrophosphate enzyme, central domain HPY15_06370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY15_06375 PF03306 Alpha-acetolactate decarboxylase HPY15_06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_06380 PF03466 LysR substrate binding domain HPY15_06385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY15_06395 PF00753 Metallo-beta-lactamase superfamily HPY15_06395 PF16123 Hydroxyacylglutathione hydrolase C-terminus HPY15_06400 PF01965 DJ-1/PfpI family HPY15_06420 PF00199 Catalase HPY15_06420 PF06628 Catalase-related immune-responsive HPY15_06430 PF00080 Copper/zinc superoxide dismutase (SODC) HPY15_06435 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HPY15_06440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY15_06440 PF00361 Proton-conducting membrane transporter HPY15_06445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_06445 PF03466 LysR substrate binding domain HPY15_06450 PF00501 AMP-binding enzyme HPY15_06450 PF13193 AMP-binding enzyme C-terminal domain HPY15_06480 PF00206 Lyase HPY15_06480 PF10415 Fumarase C C-terminus HPY15_06490 PF01654 Cytochrome bd terminal oxidase subunit I HPY15_06495 PF02322 Cytochrome bd terminal oxidase subunit II HPY15_06500 PF00005 ABC transporter HPY15_06500 PF02687 FtsX-like permease family HPY15_06500 PF12704 MacB-like periplasmic core domain HPY15_06505 PF00005 ABC transporter HPY15_06505 PF02687 FtsX-like permease family HPY15_06505 PF12704 MacB-like periplasmic core domain HPY15_06510 PF12704 MacB-like periplasmic core domain HPY15_06510 PF02687 FtsX-like permease family HPY15_06510 PF00005 ABC transporter HPY15_06520 PF00529 HlyD membrane-fusion protein of T1SS HPY15_06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_06530 PF03466 LysR substrate binding domain HPY15_06535 PF00141 Peroxidase HPY15_06540 PF00232 Glycosyl hydrolase family 1 HPY15_06545 PF00356 Bacterial regulatory proteins, lacI family HPY15_06550 PF01042 Endoribonuclease L-PSP HPY15_06555 PF04074 YhcH/YjgK/YiaL HPY15_06560 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY15_06565 PF00455 DeoR C terminal sensor domain HPY15_06565 PF08220 DeoR-like helix-turn-helix domain HPY15_06570 PF00005 ABC transporter HPY15_06570 PF17912 MalK OB fold domain HPY15_06575 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_06580 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_06585 PF13416 Bacterial extracellular solute-binding protein HPY15_06595 PF01618 MotA/TolQ/ExbB proton channel family HPY15_06600 PF01618 MotA/TolQ/ExbB proton channel family HPY15_06605 PF02472 Biopolymer transport protein ExbD/TolR HPY15_06610 PF03544 Gram-negative bacterial TonB protein C-terminal HPY15_06620 PF01068 ATP dependent DNA ligase domain HPY15_06620 PF14743 DNA ligase OB-like domain HPY15_06630 PF01554 MatE HPY15_06640 PF03881 Fructosamine kinase HPY15_06650 PF00877 NlpC/P60 family HPY15_06655 PF00672 HAMP domain HPY15_06655 PF12729 Four helix bundle sensory module for signal transduction HPY15_06655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_06670 PF00480 ROK family HPY15_06680 PF03453 MoeA N-terminal region (domain I and II) HPY15_06680 PF03454 MoeA C-terminal region (domain IV) HPY15_06680 PF00994 Probable molybdopterin binding domain HPY15_06685 PF12804 MobA-like NTP transferase domain HPY15_06690 PF08402 TOBE domain HPY15_06690 PF00005 ABC transporter HPY15_06695 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_06700 PF12849 PBP superfamily domain HPY15_06705 PF02954 Bacterial regulatory protein, Fis family HPY15_06705 PF00158 Sigma-54 interaction domain HPY15_06705 PF00072 Response regulator receiver domain HPY15_06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_06710 PF00512 His Kinase A (phospho-acceptor) domain HPY15_06710 PF00989 PAS fold HPY15_06715 PF00005 ABC transporter HPY15_06715 PF12848 ABC transporter HPY15_06720 PF02634 FdhD/NarQ family HPY15_06740 PF02613 Nitrate reductase delta subunit HPY15_06750 PF00384 Molybdopterin oxidoreductase HPY15_06750 PF01568 Molydopterin dinucleotide binding domain HPY15_06750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY15_06755 PF13247 4Fe-4S dicluster domain HPY15_06770 PF02146 Sir2 family HPY15_06775 PF04461 Protein of unknown function (DUF520) HPY15_06780 PF00793 DAHP synthetase I family HPY15_06795 PF17783 CvfB-like winged helix domain HPY15_06795 PF13509 S1 domain HPY15_06800 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HPY15_06800 PF01189 16S rRNA methyltransferase RsmB/F HPY15_06800 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HPY15_06805 PF02470 MlaD protein HPY15_06810 PF04403 Paraquat-inducible protein A HPY15_06815 PF00005 ABC transporter HPY15_06815 PF00664 ABC transporter transmembrane region HPY15_06820 PF13185 GAF domain HPY15_06825 PF04352 ProQ/FINO family HPY15_06825 PF17516 ProQ C-terminal domain HPY15_06830 PF11818 C-terminal domain of tail specific protease (DUF3340) HPY15_06830 PF17804 Tail specific protease N-terminal domain HPY15_06830 PF03572 Peptidase family S41 HPY15_06830 PF00595 PDZ domain HPY15_06840 PF01433 Peptidase family M1 domain HPY15_06840 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HPY15_06840 PF11940 Domain of unknown function (DUF3458) Ig-like fold HPY15_06850 PF05088 Bacterial NAD-glutamate dehydrogenase HPY15_06855 PF01180 Dihydroorotate dehydrogenase HPY15_06860 PF07126 Cell-division protein ZapC HPY15_06865 PF10672 S-adenosylmethionine-dependent methyltransferase HPY15_06865 PF02926 THUMP domain HPY15_06865 PF01170 Putative RNA methylase family UPF0020 HPY15_06885 PF04957 Ribosome modulation factor HPY15_06890 PF07977 FabA-like domain HPY15_06895 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY15_06895 PF13654 AAA domain HPY15_06900 PF17414 MatP C-terminal ribbon-helix-helix domain HPY15_06900 PF06303 MatP N-terminal domain HPY15_06920 PF12441 CopG antitoxin of type II toxin-antitoxin system HPY15_06930 PF07411 Domain of unknown function (DUF1508) HPY15_06985 PF11647 Membrane Localization Domain HPY15_06985 PF16671 Actin cross-linking domain HPY15_06985 PF07634 RtxA repeat HPY15_06985 PF11713 Peptidase C80 family HPY15_06985 PF12146 Serine aminopeptidase, S33 HPY15_06990 PF02794 RTX toxin acyltransferase family HPY15_07000 PF00664 ABC transporter transmembrane region HPY15_07000 PF03412 Peptidase C39 family HPY15_07000 PF00005 ABC transporter HPY15_07010 PF00664 ABC transporter transmembrane region HPY15_07010 PF00005 ABC transporter HPY15_07010 PF03412 Peptidase C39 family HPY15_07015 PF09308 LuxQ, periplasmic HPY15_07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_07015 PF00072 Response regulator receiver domain HPY15_07015 PF00512 His Kinase A (phospho-acceptor) domain HPY15_07030 PF00115 Cytochrome C and Quinol oxidase polypeptide I HPY15_07045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY15_07045 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HPY15_07055 PF00403 Heavy-metal-associated domain HPY15_07070 PF00027 Cyclic nucleotide-binding domain HPY15_07070 PF13545 Crp-like helix-turn-helix domain HPY15_07075 PF00582 Universal stress protein family HPY15_07080 PF01171 PP-loop family HPY15_07100 PF08402 TOBE domain HPY15_07100 PF00005 ABC transporter HPY15_07105 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_07110 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_07115 PF13416 Bacterial extracellular solute-binding protein HPY15_07120 PF13416 Bacterial extracellular solute-binding protein HPY15_07130 PF01235 Sodium:alanine symporter family HPY15_07135 PF01810 LysE type translocator HPY15_07155 PF16671 Actin cross-linking domain HPY15_07155 PF04717 Type VI secretion system, phage-baseplate injector HPY15_07160 PF05638 Type VI secretion system effector, Hcp HPY15_07165 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HPY15_07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07170 PF00672 HAMP domain HPY15_07170 PF02743 Cache domain HPY15_07175 PF07690 Major Facilitator Superfamily HPY15_07180 PF00529 HlyD membrane-fusion protein of T1SS HPY15_07180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY15_07185 PF02321 Outer membrane efflux protein HPY15_07195 PF00271 Helicase conserved C-terminal domain HPY15_07195 PF00270 DEAD/DEAH box helicase HPY15_07200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07200 PF08447 PAS fold HPY15_07200 PF13426 PAS domain HPY15_07205 PF00672 HAMP domain HPY15_07205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07210 PF00672 HAMP domain HPY15_07210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07210 PF17202 Single cache domain 3 HPY15_07215 PF01584 CheW-like domain HPY15_07220 PF00072 Response regulator receiver domain HPY15_07220 PF01339 CheB methylesterase HPY15_07230 PF03705 CheR methyltransferase, all-alpha domain HPY15_07230 PF01739 CheR methyltransferase, SAM binding domain HPY15_07235 PF02895 Signal transducing histidine kinase, homodimeric domain HPY15_07235 PF01584 CheW-like domain HPY15_07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_07235 PF01627 Hpt domain HPY15_07235 PF00072 Response regulator receiver domain HPY15_07240 PF01627 Hpt domain HPY15_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_07240 PF02895 Signal transducing histidine kinase, homodimeric domain HPY15_07240 PF01584 CheW-like domain HPY15_07240 PF07194 P2 response regulator binding domain HPY15_07250 PF00072 Response regulator receiver domain HPY15_07255 PF00672 HAMP domain HPY15_07255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07260 PF00893 Small Multidrug Resistance protein HPY15_07265 PF03441 FAD binding domain of DNA photolyase HPY15_07265 PF00875 DNA photolyase HPY15_07270 PF07690 Major Facilitator Superfamily HPY15_07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_07275 PF03466 LysR substrate binding domain HPY15_07285 PF01979 Amidohydrolase family HPY15_07290 PF10437 Bacterial lipoate protein ligase C-terminus HPY15_07290 PF03099 Biotin/lipoate A/B protein ligase family HPY15_07295 PF00012 Hsp70 protein HPY15_07305 PF11898 Domain of unknown function (DUF3418) HPY15_07305 PF04408 Helicase associated domain (HA2) HPY15_07305 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HPY15_07305 PF00271 Helicase conserved C-terminal domain HPY15_07305 PF00270 DEAD/DEAH box helicase HPY15_07325 PF00563 EAL domain HPY15_07325 PF00990 Diguanylate cyclase, GGDEF domain HPY15_07325 PF03707 Bacterial signalling protein N terminal repeat HPY15_07335 PF00012 Hsp70 protein HPY15_07340 PF00012 Hsp70 protein HPY15_07345 PF17158 Membrane-associated sensor, integral membrane domain HPY15_07345 PF00990 Diguanylate cyclase, GGDEF domain HPY15_07355 PF03707 Bacterial signalling protein N terminal repeat HPY15_07355 PF00990 Diguanylate cyclase, GGDEF domain HPY15_07355 PF00563 EAL domain HPY15_07375 PF06508 Queuosine biosynthesis protein QueC HPY15_07380 PF04055 Radical SAM superfamily HPY15_07390 PF10414 Sirohaem synthase dimerisation region HPY15_07390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY15_07390 PF14824 Sirohaem biosynthesis protein central HPY15_07395 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_07400 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_07405 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_07410 PF00005 ABC transporter HPY15_07415 PF01027 Inhibitor of apoptosis-promoting Bax1 HPY15_07420 PF04358 DsrC like protein HPY15_07425 PF00708 Acylphosphatase HPY15_07430 PF10672 S-adenosylmethionine-dependent methyltransferase HPY15_07430 PF17785 PUA-like domain HPY15_07435 PF00990 Diguanylate cyclase, GGDEF domain HPY15_07440 PF00462 Glutaredoxin HPY15_07440 PF08534 Redoxin HPY15_07445 PF01627 Hpt domain HPY15_07445 PF00512 His Kinase A (phospho-acceptor) domain HPY15_07445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_07445 PF00072 Response regulator receiver domain HPY15_07445 PF00672 HAMP domain HPY15_07445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY15_07450 PF00072 Response regulator receiver domain HPY15_07455 PF14497 Glutathione S-transferase, C-terminal domain HPY15_07455 PF02798 Glutathione S-transferase, N-terminal domain HPY15_07465 PF04209 homogentisate 1,2-dioxygenase HPY15_07470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY15_07475 PF01546 Peptidase family M20/M25/M40 HPY15_07475 PF07687 Peptidase dimerisation domain HPY15_07490 PF13193 AMP-binding enzyme C-terminal domain HPY15_07490 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY15_07490 PF00501 AMP-binding enzyme HPY15_07495 PF04303 PrpF protein HPY15_07500 PF00694 Aconitase C-terminal domain HPY15_07500 PF00330 Aconitase family (aconitate hydratase) HPY15_07505 PF00285 Citrate synthase, C-terminal domain HPY15_07515 PF00392 Bacterial regulatory proteins, gntR family HPY15_07515 PF07729 FCD domain HPY15_07530 PF01970 Tripartite tricarboxylate transporter TctA family HPY15_07550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY15_07550 PF00529 HlyD membrane-fusion protein of T1SS HPY15_07565 PF02653 Branched-chain amino acid transport system / permease component HPY15_07570 PF00005 ABC transporter HPY15_07575 PF13407 Periplasmic binding protein domain HPY15_07595 PF00486 Transcriptional regulatory protein, C terminal HPY15_07595 PF00072 Response regulator receiver domain HPY15_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_07600 PF00672 HAMP domain HPY15_07600 PF00512 His Kinase A (phospho-acceptor) domain HPY15_07605 PF06629 MltA-interacting protein MipA HPY15_07610 PF04393 Protein of unknown function (DUF535) HPY15_07615 PF00158 Sigma-54 interaction domain HPY15_07615 PF00072 Response regulator receiver domain HPY15_07615 PF02954 Bacterial regulatory protein, Fis family HPY15_07620 PF00512 His Kinase A (phospho-acceptor) domain HPY15_07620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_07620 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_07625 PF00939 Sodium:sulfate symporter transmembrane region HPY15_07630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07630 PF00672 HAMP domain HPY15_07635 PF00842 Alanine racemase, C-terminal domain HPY15_07635 PF01168 Alanine racemase, N-terminal domain HPY15_07640 PF00892 EamA-like transporter family HPY15_07650 PF13302 Acetyltransferase (GNAT) domain HPY15_07655 PF00158 Sigma-54 interaction domain HPY15_07655 PF18024 Helix-turn-helix domain HPY15_07660 PF05128 Domain of unknown function (DUF697) HPY15_07665 PF04317 YcjX-like family, DUF463 HPY15_07680 PF04715 Anthranilate synthase component I, N terminal region HPY15_07680 PF00425 chorismate binding enzyme HPY15_07685 PF00293 NUDIX domain HPY15_07690 PF03222 Tryptophan/tyrosine permease family HPY15_07695 PF03313 Serine dehydratase alpha chain HPY15_07695 PF03315 Serine dehydratase beta chain HPY15_07700 PF01242 6-pyruvoyl tetrahydropterin synthase HPY15_07705 PF00672 HAMP domain HPY15_07705 PF12729 Four helix bundle sensory module for signal transduction HPY15_07705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07710 PF00152 tRNA synthetases class II (D, K and N) HPY15_07710 PF01336 OB-fold nucleic acid binding domain HPY15_07715 PF08543 Phosphomethylpyrimidine kinase HPY15_07720 PF00672 HAMP domain HPY15_07720 PF01966 HD domain HPY15_07725 PF00155 Aminotransferase class I and II HPY15_07740 PF01797 Transposase IS200 like HPY15_07750 PF17200 Single Cache domain 2 HPY15_07750 PF00672 HAMP domain HPY15_07750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07755 PF04349 Periplasmic glucan biosynthesis protein, MdoG HPY15_07760 PF13506 Glycosyl transferase family 21 HPY15_07765 PF00356 Bacterial regulatory proteins, lacI family HPY15_07770 PF04794 YdjC-like protein HPY15_07775 PF11975 Family 4 glycosyl hydrolase C-terminal domain HPY15_07775 PF02056 Family 4 glycosyl hydrolase HPY15_07780 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HPY15_07785 PF02378 Phosphotransferase system, EIIC HPY15_07790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY15_07795 PF01522 Polysaccharide deacetylase HPY15_07800 PF02028 BCCT, betaine/carnitine/choline family transporter HPY15_07805 PF01047 MarR family HPY15_07810 PF00072 Response regulator receiver domain HPY15_07810 PF00196 Bacterial regulatory proteins, luxR family HPY15_07815 PF07730 Histidine kinase HPY15_07815 PF17200 Single Cache domain 2 HPY15_07820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY15_07830 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY15_07845 PF00753 Metallo-beta-lactamase superfamily HPY15_07850 PF05951 Bacterial protein of unknown function (DUF882) HPY15_07880 PF00925 GTP cyclohydrolase II HPY15_07890 PF07690 Major Facilitator Superfamily HPY15_07905 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY15_07905 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY15_07915 PF03477 ATP cone domain HPY15_07915 PF00317 Ribonucleotide reductase, all-alpha domain HPY15_07915 PF02867 Ribonucleotide reductase, barrel domain HPY15_07920 PF00268 Ribonucleotide reductase, small chain HPY15_07925 PF00175 Oxidoreductase NAD-binding domain HPY15_07925 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY15_07925 PF00970 Oxidoreductase FAD-binding domain HPY15_07935 PF00994 Probable molybdopterin binding domain HPY15_07950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_07950 PF17200 Single Cache domain 2 HPY15_07950 PF00672 HAMP domain HPY15_07965 PF00005 ABC transporter HPY15_07970 PF01032 FecCD transport family HPY15_07975 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HPY15_07985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HPY15_07990 PF02654 Cobalamin-5-phosphate synthase HPY15_07995 PF02277 Phosphoribosyltransferase HPY15_08000 PF01641 SelR domain HPY15_08010 PF00929 Exonuclease HPY15_08010 PF08411 Exonuclease C-terminal HPY15_08015 PF03788 LrgA family HPY15_08020 PF04172 LrgB-like family HPY15_08025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY15_08025 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HPY15_08035 PF02222 ATP-grasp domain HPY15_08040 PF05724 Thiopurine S-methyltransferase (TPMT) HPY15_08050 PF00216 Bacterial DNA-binding protein HPY15_08055 PF03147 Ferredoxin-fold anticodon binding domain HPY15_08055 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPY15_08055 PF01588 Putative tRNA binding domain HPY15_08055 PF03484 tRNA synthetase B5 domain HPY15_08055 PF03483 B3/4 domain HPY15_08060 PF01409 tRNA synthetases class II core domain (F) HPY15_08060 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HPY15_08070 PF00072 Response regulator receiver domain HPY15_08070 PF00990 Diguanylate cyclase, GGDEF domain HPY15_08075 PF01797 Transposase IS200 like HPY15_08105 PF01066 CDP-alcohol phosphatidyltransferase HPY15_08110 PF01541 GIY-YIG catalytic domain HPY15_08110 PF02151 UvrB/uvrC motif HPY15_08110 PF08459 UvrC Helix-hairpin-helix N-terminal HPY15_08115 PF00196 Bacterial regulatory proteins, luxR family HPY15_08115 PF00072 Response regulator receiver domain HPY15_08120 PF00136 DNA polymerase family B HPY15_08120 PF03104 DNA polymerase family B, exonuclease domain HPY15_08125 PF00990 Diguanylate cyclase, GGDEF domain HPY15_08125 PF00563 EAL domain HPY15_08125 PF13426 PAS domain HPY15_08135 PF08207 Elongation factor P (EF-P) KOW-like domain HPY15_08135 PF01132 Elongation factor P (EF-P) OB domain HPY15_08135 PF09285 Elongation factor P, C-terminal HPY15_08140 PF04269 Protein of unknown function, DUF440 HPY15_08150 PF07702 UTRA domain HPY15_08150 PF00392 Bacterial regulatory proteins, gntR family HPY15_08155 PF01979 Amidohydrolase family HPY15_08160 PF00491 Arginase family HPY15_08165 PF01175 Urocanase Rossmann-like domain HPY15_08165 PF17392 Urocanase C-terminal domain HPY15_08165 PF17391 Urocanase N-terminal domain HPY15_08170 PF00221 Aromatic amino acid lyase HPY15_08180 PF00089 Trypsin HPY15_08185 PF04191 Phospholipid methyltransferase HPY15_08190 PF02913 FAD linked oxidases, C-terminal domain HPY15_08190 PF01565 FAD binding domain HPY15_08190 PF13183 4Fe-4S dicluster domain HPY15_08205 PF13488 Glycine zipper HPY15_08205 PF00691 OmpA family HPY15_08225 PF01259 SAICAR synthetase HPY15_08235 PF00390 Malic enzyme, N-terminal domain HPY15_08235 PF03949 Malic enzyme, NAD binding domain HPY15_08245 PF02698 DUF218 domain HPY15_08250 PF08448 PAS fold HPY15_08250 PF00990 Diguanylate cyclase, GGDEF domain HPY15_08255 PF00266 Aminotransferase class-V HPY15_08265 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_08270 PF00664 ABC transporter transmembrane region HPY15_08270 PF00005 ABC transporter HPY15_08275 PF00005 ABC transporter HPY15_08275 PF00664 ABC transporter transmembrane region HPY15_08280 PF01479 S4 domain HPY15_08280 PF00849 RNA pseudouridylate synthase HPY15_08285 PF01300 Telomere recombination HPY15_08290 PF02811 PHP domain HPY15_08295 PF08056 Tryptophan operon leader peptide HPY15_08300 PF00425 chorismate binding enzyme HPY15_08300 PF04715 Anthranilate synthase component I, N terminal region HPY15_08305 PF00117 Glutamine amidotransferase class-I HPY15_08310 PF00591 Glycosyl transferase family, a/b domain HPY15_08310 PF02885 Glycosyl transferase family, helical bundle domain HPY15_08315 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HPY15_08315 PF00218 Indole-3-glycerol phosphate synthase HPY15_08320 PF00291 Pyridoxal-phosphate dependent enzyme HPY15_08325 PF00290 Tryptophan synthase alpha chain HPY15_08330 PF00375 Sodium:dicarboxylate symporter family HPY15_08335 PF00265 Thymidine kinase HPY15_08340 PF01336 OB-fold nucleic acid binding domain HPY15_08340 PF02938 GAD domain HPY15_08340 PF00152 tRNA synthetases class II (D, K and N) HPY15_08345 PF01904 Protein of unknown function DUF72 HPY15_08350 PF13649 Methyltransferase domain HPY15_08355 PF08003 Protein of unknown function (DUF1698) HPY15_08360 PF08443 RimK-like ATP-grasp domain HPY15_08360 PF18030 RimK PreATP-grasp domain HPY15_08375 PF00266 Aminotransferase class-V HPY15_08385 PF00512 His Kinase A (phospho-acceptor) domain HPY15_08385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_08385 PF00989 PAS fold HPY15_08400 PF04994 TfoX C-terminal domain HPY15_08400 PF04993 TfoX N-terminal domain HPY15_08410 PF03956 Lysine exporter LysO HPY15_08420 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY15_08425 PF01380 SIS domain HPY15_08425 PF01418 Helix-turn-helix domain, rpiR family HPY15_08430 PF00465 Iron-containing alcohol dehydrogenase HPY15_08430 PF00171 Aldehyde dehydrogenase family HPY15_08435 PF00462 Glutaredoxin HPY15_08440 PF02080 TrkA-C domain HPY15_08440 PF06826 Predicted Permease Membrane Region HPY15_08445 PF07724 AAA domain (Cdc48 subfamily) HPY15_08445 PF17871 AAA lid domain HPY15_08445 PF00004 ATPase family associated with various cellular activities (AAA) HPY15_08445 PF10431 C-terminal, D2-small domain, of ClpB protein HPY15_08445 PF02861 Clp amino terminal domain, pathogenicity island component HPY15_08450 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPY15_08455 PF00313 'Cold-shock' DNA-binding domain HPY15_08460 PF03971 Monomeric isocitrate dehydrogenase HPY15_08465 PF00849 RNA pseudouridylate synthase HPY15_08470 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HPY15_08470 PF01502 Phosphoribosyl-AMP cyclohydrolase HPY15_08475 PF00977 Histidine biosynthesis protein HPY15_08480 PF00977 Histidine biosynthesis protein HPY15_08485 PF00117 Glutamine amidotransferase class-I HPY15_08490 PF08645 Polynucleotide kinase 3 phosphatase HPY15_08490 PF00475 Imidazoleglycerol-phosphate dehydratase HPY15_08495 PF00155 Aminotransferase class I and II HPY15_08500 PF00815 Histidinol dehydrogenase HPY15_08505 PF01634 ATP phosphoribosyltransferase HPY15_08505 PF08029 HisG, C-terminal domain HPY15_08510 PF03553 Na+/H+ antiporter family HPY15_08515 PF00816 H-NS histone family HPY15_08520 PF00294 pfkB family carbohydrate kinase HPY15_08530 PF04356 Protein of unknown function (DUF489) HPY15_08535 PF08328 Adenylosuccinate lyase C-terminal HPY15_08535 PF00206 Lyase HPY15_08545 PF16036 Chalcone isomerase-like HPY15_08570 PF00106 short chain dehydrogenase HPY15_08580 PF01435 Peptidase family M48 HPY15_08595 PF08241 Methyltransferase domain HPY15_08600 PF00155 Aminotransferase class I and II HPY15_08605 PF06968 Biotin and Thiamin Synthesis associated domain HPY15_08605 PF04055 Radical SAM superfamily HPY15_08610 PF00202 Aminotransferase class-III HPY15_08615 PF02403 Seryl-tRNA synthetase N-terminal domain HPY15_08615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY15_08620 PF12002 MgsA AAA+ ATPase C terminal HPY15_08620 PF16193 AAA C-terminal domain HPY15_08620 PF00004 ATPase family associated with various cellular activities (AAA) HPY15_08625 PF03548 Outer membrane lipoprotein carrier protein LolA HPY15_08630 PF02810 SEC-C motif HPY15_08630 PF01043 SecA preprotein cross-linking domain HPY15_08630 PF07516 SecA Wing and Scaffold domain HPY15_08630 PF07517 SecA DEAD-like domain HPY15_08635 PF01207 Dihydrouridine synthase (Dus) HPY15_08640 PF05230 MASE2 domain HPY15_08640 PF00990 Diguanylate cyclase, GGDEF domain HPY15_08645 PF00005 ABC transporter HPY15_08650 PF02653 Branched-chain amino acid transport system / permease component HPY15_08660 PF09905 DNA-binding protein VF530 HPY15_08665 PF04217 Protein of unknown function, DUF412 HPY15_08670 PF00871 Acetokinase family HPY15_08675 PF01515 Phosphate acetyl/butaryl transferase HPY15_08675 PF07085 DRTGG domain HPY15_08680 PF13409 Glutathione S-transferase, N-terminal domain HPY15_08685 PF00005 ABC transporter HPY15_08685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_08690 PF00005 ABC transporter HPY15_08690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_08695 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_08695 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY15_08700 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_08705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY15_08715 PF00072 Response regulator receiver domain HPY15_08715 PF13188 PAS domain HPY15_08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_08715 PF08448 PAS fold HPY15_08715 PF00512 His Kinase A (phospho-acceptor) domain HPY15_08720 PF00158 Sigma-54 interaction domain HPY15_08720 PF00072 Response regulator receiver domain HPY15_08720 PF02954 Bacterial regulatory protein, Fis family HPY15_08725 PF13188 PAS domain HPY15_08725 PF03707 Bacterial signalling protein N terminal repeat HPY15_08725 PF00990 Diguanylate cyclase, GGDEF domain HPY15_08725 PF00563 EAL domain HPY15_08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_08730 PF00512 His Kinase A (phospho-acceptor) domain HPY15_08735 PF13188 PAS domain HPY15_08735 PF13426 PAS domain HPY15_08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_08735 PF00989 PAS fold HPY15_08735 PF00512 His Kinase A (phospho-acceptor) domain HPY15_08745 PF00072 Response regulator receiver domain HPY15_08760 PF01300 Telomere recombination HPY15_08760 PF03481 Putative GTP-binding controlling metal-binding HPY15_08775 PF01161 Phosphatidylethanolamine-binding protein HPY15_08785 PF00704 Glycosyl hydrolases family 18 HPY15_08785 PF06483 Chitinase C HPY15_08800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY15_08800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY15_08805 PF01022 Bacterial regulatory protein, arsR family HPY15_08815 PF08448 PAS fold HPY15_08815 PF00990 Diguanylate cyclase, GGDEF domain HPY15_08825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY15_08840 PF01037 Lrp/AsnC ligand binding domain HPY15_08840 PF13404 AsnC-type helix-turn-helix domain HPY15_08845 PF00291 Pyridoxal-phosphate dependent enzyme HPY15_08850 PF01343 Peptidase family S49 HPY15_08850 PF08496 Peptidase family S49 N-terminal HPY15_08855 PF00106 short chain dehydrogenase HPY15_08865 PF03692 Putative zinc- or iron-chelating domain HPY15_08870 PF03692 Putative zinc- or iron-chelating domain HPY15_08875 PF13662 Toprim domain HPY15_08875 PF02132 RecR protein HPY15_08880 PF02575 YbaB/EbfC DNA-binding family HPY15_08885 PF12169 DNA polymerase III subunits gamma and tau domain III HPY15_08885 PF12170 DNA polymerase III tau subunit V interacting with alpha HPY15_08885 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HPY15_08890 PF00156 Phosphoribosyl transferase domain HPY15_08895 PF04304 Protein of unknown function (DUF454) HPY15_08900 PF00072 Response regulator receiver domain HPY15_08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_08905 PF03466 LysR substrate binding domain HPY15_08910 PF00881 Nitroreductase family HPY15_08915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY15_08915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY15_08915 PF00378 Enoyl-CoA hydratase/isomerase HPY15_08920 PF02803 Thiolase, C-terminal domain HPY15_08920 PF00108 Thiolase, N-terminal domain HPY15_08925 PF08281 Sigma-70, region 4 HPY15_08925 PF04542 Sigma-70 region 2 HPY15_08935 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY15_08940 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY15_08945 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY15_08950 PF12557 Cob(I)alamin adenosyltransferase N terminal HPY15_08950 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HPY15_08955 PF05170 AsmA family HPY15_08960 PF00485 Phosphoribulokinase / Uridine kinase family HPY15_08965 PF10609 NUBPL iron-transfer P-loop NTPase HPY15_08970 PF01588 Putative tRNA binding domain HPY15_08970 PF09334 tRNA synthetases class I (M) HPY15_08980 PF01048 Phosphorylase superfamily HPY15_08985 PF00403 Heavy-metal-associated domain HPY15_08990 PF00571 CBS domain HPY15_08990 PF01743 Poly A polymerase head domain HPY15_08995 PF00990 Diguanylate cyclase, GGDEF domain HPY15_08995 PF07694 5TMR of 5TMR-LYT HPY15_09000 PF02391 MoaE protein HPY15_09005 PF02597 ThiS family HPY15_09010 PF01967 MoaC family HPY15_09015 PF00994 Probable molybdopterin binding domain HPY15_09020 PF06463 Molybdenum Cofactor Synthesis C HPY15_09020 PF04055 Radical SAM superfamily HPY15_09025 PF01933 Uncharacterised protein family UPF0052 HPY15_09030 PF01627 Hpt domain HPY15_09035 PF00158 Sigma-54 interaction domain HPY15_09035 PF00072 Response regulator receiver domain HPY15_09035 PF02954 Bacterial regulatory protein, Fis family HPY15_09040 PF12344 Ultra-violet resistance protein B HPY15_09040 PF02151 UvrB/uvrC motif HPY15_09040 PF04851 Type III restriction enzyme, res subunit HPY15_09040 PF00271 Helicase conserved C-terminal domain HPY15_09040 PF17757 UvrB interaction domain HPY15_09050 PF02508 Rnf-Nqr subunit, membrane protein HPY15_09055 PF04060 Putative Fe-S cluster HPY15_09060 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HPY15_09060 PF10531 SLBB domain HPY15_09060 PF13375 RnfC Barrel sandwich hybrid domain HPY15_09060 PF12838 4Fe-4S dicluster domain HPY15_09065 PF03116 NQR2, RnfD, RnfE family HPY15_09070 PF04205 FMN-binding domain HPY15_09075 PF02508 Rnf-Nqr subunit, membrane protein HPY15_09080 PF00633 Helix-hairpin-helix motif HPY15_09080 PF10576 Iron-sulfur binding domain of endonuclease III HPY15_09080 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY15_09085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY15_09090 PF10952 Protein of unknown function (DUF2753) HPY15_09095 PF00691 OmpA family HPY15_09095 PF18393 MotY N-terminal domain HPY15_09100 PF00929 Exonuclease HPY15_09105 PF03553 Na+/H+ antiporter family HPY15_09105 PF13726 Na+-H+ antiporter family HPY15_09110 PF00156 Phosphoribosyl transferase domain HPY15_09115 PF02674 Colicin V production protein HPY15_09120 PF05036 Sporulation related domain HPY15_09125 PF02875 Mur ligase family, glutamate ligase domain HPY15_09125 PF08245 Mur ligase middle domain HPY15_09130 PF17848 Acetyl-coA carboxylase zinc finger domain HPY15_09130 PF01039 Carboxyl transferase domain HPY15_09135 PF01416 tRNA pseudouridine synthase HPY15_09145 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY15_09145 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HPY15_09150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY15_09150 PF00367 phosphotransferase system, EIIB HPY15_09150 PF02378 Phosphotransferase system, EIIC HPY15_09155 PF01979 Amidohydrolase family HPY15_09160 PF00480 ROK family HPY15_09160 PF01047 MarR family HPY15_09165 PF00999 Sodium/hydrogen exchanger family HPY15_09165 PF02254 TrkA-N domain HPY15_09170 PF00733 Asparagine synthase HPY15_09170 PF13537 Glutamine amidotransferase domain HPY15_09175 PF02357 Transcription termination factor nusG HPY15_09180 PF00854 POT family HPY15_09185 PF00762 Ferrochelatase HPY15_09190 PF05191 Adenylate kinase, active site lid HPY15_09195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_09195 PF00183 Hsp90 protein HPY15_09200 PF00486 Transcriptional regulatory protein, C terminal HPY15_09205 PF17323 Trans-membrane regulatory protein ToxS HPY15_09215 PF12850 Calcineurin-like phosphoesterase superfamily domain HPY15_09220 PF01370 NAD dependent epimerase/dehydratase family HPY15_09220 PF08338 Domain of unknown function (DUF1731) HPY15_09225 PF00106 short chain dehydrogenase HPY15_09230 PF00085 Thioredoxin HPY15_09235 PF01145 SPFH domain / Band 7 family HPY15_09235 PF16200 C-terminal region of band_7 HPY15_09240 PF01957 NfeD-like C-terminal, partner-binding HPY15_09245 PF13411 MerR HTH family regulatory protein HPY15_09250 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY15_09255 PF13609 Gram-negative porin HPY15_09260 PF00533 BRCA1 C Terminus (BRCT) domain HPY15_09260 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HPY15_09260 PF03120 NAD-dependent DNA ligase OB-fold domain HPY15_09260 PF01653 NAD-dependent DNA ligase adenylation domain HPY15_09260 PF12826 Helix-hairpin-helix motif HPY15_09265 PF04354 ZipA, C-terminal FtsZ-binding domain HPY15_09275 PF00291 Pyridoxal-phosphate dependent enzyme HPY15_09280 PF00381 PTS HPr component phosphorylation site HPY15_09285 PF00391 PEP-utilising enzyme, mobile domain HPY15_09285 PF02896 PEP-utilising enzyme, TIM barrel domain HPY15_09285 PF05524 PEP-utilising enzyme, N-terminal HPY15_09290 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY15_09295 PF01494 FAD binding domain HPY15_09300 PF04055 Radical SAM superfamily HPY15_09300 PF01938 TRAM domain HPY15_09300 PF00919 Uncharacterized protein family UPF0004 HPY15_09305 PF02562 PhoH-like protein HPY15_09310 PF02130 Uncharacterized protein family UPF0054 HPY15_09315 PF00571 CBS domain HPY15_09315 PF03471 Transporter associated domain HPY15_09320 PF00795 Carbon-nitrogen hydrolase HPY15_09325 PF07295 Zinc-ribbon containing domain HPY15_09330 PF08264 Anticodon-binding domain of tRNA HPY15_09330 PF00133 tRNA synthetases class I (I, L, M and V) HPY15_09330 PF13603 Leucyl-tRNA synthetase, Domain 2 HPY15_09335 PF04390 Lipopolysaccharide-assembly HPY15_09340 PF06144 DNA polymerase III, delta subunit HPY15_09340 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HPY15_09350 PF02590 Predicted SPOUT methyltransferase HPY15_09355 PF03717 Penicillin-binding Protein dimerisation domain HPY15_09355 PF00905 Penicillin binding protein transpeptidase domain HPY15_09360 PF01098 Cell cycle protein HPY15_09365 PF03330 Lytic transglycolase HPY15_09365 PF05036 Sporulation related domain HPY15_09370 PF07943 Penicillin-binding protein 5, C-terminal domain HPY15_09370 PF00768 D-alanyl-D-alanine carboxypeptidase HPY15_09375 PF04359 Protein of unknown function (DUF493) HPY15_09380 PF03099 Biotin/lipoate A/B protein ligase family HPY15_09385 PF04055 Radical SAM superfamily HPY15_09385 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HPY15_09395 PF00464 Serine hydroxymethyltransferase HPY15_09415 PF13614 AAA domain HPY15_09415 PF13807 G-rich domain on putative tyrosine kinase HPY15_09415 PF02706 Chain length determinant protein HPY15_09420 PF10531 SLBB domain HPY15_09420 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY15_09420 PF02563 Polysaccharide biosynthesis/export protein HPY15_09430 PF02397 Bacterial sugar transferase HPY15_09445 PF17945 Beta/Gamma crystallin HPY15_09445 PF12561 ToxR activated gene A lipoprotein domain HPY15_09460 PF03808 Glycosyl transferase WecB/TagA/CpsF family HPY15_09470 PF00534 Glycosyl transferases group 1 HPY15_09470 PF00862 Sucrose synthase HPY15_09480 PF00534 Glycosyl transferases group 1 HPY15_09480 PF13439 Glycosyltransferase Family 4 HPY15_09500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY15_09500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY15_09500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY15_09505 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY15_09510 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY15_09515 PF00873 AcrB/AcrD/AcrF family HPY15_09520 PF13533 Biotin-lipoyl like HPY15_09545 PF00128 Alpha amylase, catalytic domain HPY15_09545 PF16657 Maltogenic Amylase, C-terminal domain HPY15_09550 PF00367 phosphotransferase system, EIIB HPY15_09550 PF02378 Phosphotransferase system, EIIC HPY15_09555 PF00356 Bacterial regulatory proteins, lacI family HPY15_09565 PF09383 NIL domain HPY15_09565 PF00005 ABC transporter HPY15_09570 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_09575 PF03180 NLPA lipoprotein HPY15_09580 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HPY15_09585 PF07348 Syd protein (SUKH-2) HPY15_09590 PF14489 QueF-like protein HPY15_09590 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HPY15_09600 PF00990 Diguanylate cyclase, GGDEF domain HPY15_09605 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HPY15_09605 PF03641 Possible lysine decarboxylase HPY15_09605 PF11892 Domain of unknown function (DUF3412) HPY15_09610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY15_09610 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY15_09615 PF04241 Protein of unknown function (DUF423) HPY15_09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_09620 PF03466 LysR substrate binding domain HPY15_09625 PF02926 THUMP domain HPY15_09625 PF02568 Thiamine biosynthesis protein (ThiI) HPY15_09630 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPY15_09630 PF00691 OmpA family HPY15_09635 PF01618 MotA/TolQ/ExbB proton channel family HPY15_09640 PF02609 Exonuclease VII small subunit HPY15_09645 PF00348 Polyprenyl synthetase HPY15_09650 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPY15_09650 PF02779 Transketolase, pyrimidine binding domain HPY15_09650 PF02780 Transketolase, C-terminal domain HPY15_09655 PF00849 RNA pseudouridylate synthase HPY15_09660 PF04287 tRNA pseudouridine synthase C HPY15_09675 PF13302 Acetyltransferase (GNAT) domain HPY15_09685 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HPY15_09690 PF03806 AbgT putative transporter family HPY15_09695 PF00444 Ribosomal protein L36 HPY15_09700 PF01197 Ribosomal protein L31 HPY15_09705 PF18389 TrmO C-terminal domain HPY15_09705 PF01980 tRNA-methyltransferase O HPY15_09710 PF03129 Anticodon binding domain HPY15_09710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY15_09710 PF04073 Aminoacyl-tRNA editing domain HPY15_09720 PF06786 Uncharacterised protein family (UPF0253) HPY15_09730 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HPY15_09730 PF02769 AIR synthase related protein, C-terminal domain HPY15_09730 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HPY15_09740 PF01464 Transglycosylase SLT domain HPY15_09740 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_09745 PF14437 MafB19-like deaminase HPY15_09750 PF03806 AbgT putative transporter family HPY15_09770 PF07963 Prokaryotic N-terminal methylation motif HPY15_09770 PF14245 Type IV pilin PilA HPY15_09775 PF07963 Prokaryotic N-terminal methylation motif HPY15_09775 PF00114 Pilin (bacterial filament) HPY15_09780 PF01556 DnaJ C terminal domain HPY15_09780 PF00226 DnaJ domain HPY15_09780 PF00684 DnaJ central domain HPY15_09785 PF00012 Hsp70 protein HPY15_09790 PF01025 GrpE HPY15_09795 PF01513 ATP-NAD kinase HPY15_09800 PF02463 RecF/RecN/SMC N terminal domain HPY15_09805 PF04355 SmpA / OmlA family HPY15_09810 PF03658 RnfH family Ubiquitin HPY15_09815 PF03364 Polyketide cyclase / dehydrase and lipid transport HPY15_09820 PF01668 SmpB protein HPY15_09900 PF00075 RNase H HPY15_09945 PF01381 Helix-turn-helix HPY15_09960 PF18766 SWI2/SNF2 ATPase HPY15_09960 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPY15_09960 PF11867 Domain of unknown function (DUF3387) HPY15_09965 PF01420 Type I restriction modification DNA specificity domain HPY15_09970 PF02384 N-6 DNA Methylase HPY15_09990 PF11953 Domain of unknown function (DUF3470) HPY15_09990 PF00037 4Fe-4S binding domain HPY15_09995 PF00588 SpoU rRNA Methylase family HPY15_09995 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY15_10005 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HPY15_10010 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HPY15_10015 PF04223 Citrate lyase, alpha subunit (CitF) HPY15_10020 PF03328 HpcH/HpaI aldolase/citrate lyase family HPY15_10025 PF06857 Malonate decarboxylase delta subunit (MdcD) HPY15_10030 PF08218 Citrate lyase ligase C-terminal domain HPY15_10035 PF03390 2-hydroxycarboxylate transporter family HPY15_10040 PF04277 Oxaloacetate decarboxylase, gamma chain HPY15_10045 PF00682 HMGL-like HPY15_10045 PF02436 Conserved carboxylase domain HPY15_10045 PF00364 Biotin-requiring enzyme HPY15_10050 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY15_10055 PF17203 Single cache domain 3 HPY15_10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_10060 PF12431 Transcriptional regulator HPY15_10060 PF00072 Response regulator receiver domain HPY15_10080 PF01266 FAD dependent oxidoreductase HPY15_10085 PF01235 Sodium:alanine symporter family HPY15_10090 PF01648 4'-phosphopantetheinyl transferase superfamily HPY15_10090 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HPY15_10095 PF00005 ABC transporter HPY15_10100 PF01032 FecCD transport family HPY15_10105 PF01032 FecCD transport family HPY15_10110 PF01497 Periplasmic binding protein HPY15_10125 PF00425 chorismate binding enzyme HPY15_10130 PF13193 AMP-binding enzyme C-terminal domain HPY15_10130 PF00501 AMP-binding enzyme HPY15_10135 PF00550 Phosphopantetheine attachment site HPY15_10135 PF00857 Isochorismatase family HPY15_10140 PF01184 GPR1/FUN34/yaaH family HPY15_10145 PF00704 Glycosyl hydrolases family 18 HPY15_10145 PF06483 Chitinase C HPY15_10150 PF00117 Glutamine amidotransferase class-I HPY15_10150 PF02540 NAD synthase HPY15_10150 PF00958 GMP synthase C terminal domain HPY15_10155 PF00478 IMP dehydrogenase / GMP reductase domain HPY15_10155 PF00571 CBS domain HPY15_10160 PF02601 Exonuclease VII, large subunit HPY15_10160 PF13742 OB-fold nucleic acid binding domain HPY15_10175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPY15_10175 PF01926 50S ribosome-binding GTPase HPY15_10180 PF13360 PQQ-like domain HPY15_10185 PF09976 Tetratricopeptide repeat-like domain HPY15_10190 PF13393 Histidyl-tRNA synthetase HPY15_10190 PF03129 Anticodon binding domain HPY15_10195 PF04551 GcpE protein HPY15_10200 PF13464 Domain of unknown function (DUF4115) HPY15_10205 PF04055 Radical SAM superfamily HPY15_10210 PF00334 Nucleoside diphosphate kinase HPY15_10215 PF00883 Cytosol aminopeptidase family, catalytic domain HPY15_10215 PF12404 Peptidase HPY15_10220 PF04384 Iron-sulphur cluster assembly HPY15_10225 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY15_10230 PF00012 Hsp70 protein HPY15_10235 PF00226 DnaJ domain HPY15_10235 PF07743 HSCB C-terminal oligomerisation domain HPY15_10240 PF01521 Iron-sulphur cluster biosynthesis HPY15_10245 PF01592 NifU-like N terminal domain HPY15_10250 PF00266 Aminotransferase class-V HPY15_10255 PF02082 Transcriptional regulator HPY15_10260 PF00588 SpoU rRNA Methylase family HPY15_10265 PF00459 Inositol monophosphatase family HPY15_10270 PF07549 SecD/SecF GG Motif HPY15_10270 PF02355 Protein export membrane protein HPY15_10275 PF07549 SecD/SecF GG Motif HPY15_10275 PF13721 SecD export protein N-terminal TM region HPY15_10275 PF02355 Protein export membrane protein HPY15_10280 PF02699 Preprotein translocase subunit HPY15_10285 PF01702 Queuine tRNA-ribosyltransferase HPY15_10290 PF02547 Queuosine biosynthesis protein HPY15_10295 PF00571 CBS domain HPY15_10300 PF00463 Isocitrate lyase family HPY15_10305 PF01274 Malate synthase HPY15_10310 PF03466 LysR substrate binding domain HPY15_10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_10315 PF10417 C-terminal domain of 1-Cys peroxiredoxin HPY15_10315 PF00578 AhpC/TSA family HPY15_10320 PF03932 CutC family HPY15_10325 PF03976 Polyphosphate kinase 2 (PPK2) HPY15_10330 PF01895 PhoU domain HPY15_10335 PF00005 ABC transporter HPY15_10340 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_10345 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_10350 PF17941 Polyphosphate kinase C-terminal domain 1 HPY15_10350 PF13089 Polyphosphate kinase N-terminal domain HPY15_10350 PF02503 Polyphosphate kinase middle domain HPY15_10350 PF13090 Polyphosphate kinase C-terminal domain 2 HPY15_10355 PF02541 Ppx/GppA phosphatase family HPY15_10360 PF12849 PBP superfamily domain HPY15_10365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_10365 PF11808 Phosphate regulon sensor protein PhoR HPY15_10365 PF00989 PAS fold HPY15_10365 PF00512 His Kinase A (phospho-acceptor) domain HPY15_10370 PF00072 Response regulator receiver domain HPY15_10370 PF00486 Transcriptional regulatory protein, C terminal HPY15_10375 PF04381 Putative exonuclease, RdgC HPY15_10385 PF00037 4Fe-4S binding domain HPY15_10390 PF00881 Nitroreductase family HPY15_10430 PF07724 AAA domain (Cdc48 subfamily) HPY15_10430 PF00004 ATPase family associated with various cellular activities (AAA) HPY15_10430 PF10431 C-terminal, D2-small domain, of ClpB protein HPY15_10430 PF17871 AAA lid domain HPY15_10430 PF02861 Clp amino terminal domain, pathogenicity island component HPY15_10440 PF01479 S4 domain HPY15_10440 PF00849 RNA pseudouridylate synthase HPY15_10445 PF13525 Outer membrane lipoprotein HPY15_10450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY15_10455 PF00800 Prephenate dehydratase HPY15_10455 PF01817 Chorismate mutase type II HPY15_10460 PF13416 Bacterial extracellular solute-binding protein HPY15_10465 PF00563 EAL domain HPY15_10465 PF00990 Diguanylate cyclase, GGDEF domain HPY15_10470 PF01931 Protein of unknown function DUF84 HPY15_10475 PF01371 Trp repressor protein HPY15_10480 PF14718 Soluble lytic murein transglycosylase L domain HPY15_10480 PF01464 Transglycosylase SLT domain HPY15_10485 PF00005 ABC transporter HPY15_10485 PF12848 ABC transporter HPY15_10490 PF07238 PilZ domain HPY15_10495 PF01817 Chorismate mutase type II HPY15_10495 PF02153 Prephenate dehydrogenase HPY15_10500 PF00793 DAHP synthetase I family HPY15_10505 PF06580 Histidine kinase HPY15_10505 PF07694 5TMR of 5TMR-LYT HPY15_10510 PF04397 LytTr DNA-binding domain HPY15_10510 PF00072 Response regulator receiver domain HPY15_10515 PF00933 Glycosyl hydrolase family 3 N terminal domain HPY15_10520 PF03702 Anhydro-N-acetylmuramic acid kinase HPY15_10525 PF13580 SIS domain HPY15_10540 PF02554 Carbon starvation protein CstA HPY15_10545 PF02401 LytB protein HPY15_10550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY15_10555 PF01252 Signal peptidase (SPase) II HPY15_10560 PF06827 Zinc finger found in FPG and IleRS HPY15_10560 PF08264 Anticodon-binding domain of tRNA HPY15_10560 PF00133 tRNA synthetases class I (I, L, M and V) HPY15_10565 PF01687 Riboflavin kinase HPY15_10565 PF06574 FAD synthetase HPY15_10570 PF03023 Lipid II flippase MurJ HPY15_10575 PF01649 Ribosomal protein S20 HPY15_10580 PF01022 Bacterial regulatory protein, arsR family HPY15_10585 PF03466 LysR substrate binding domain HPY15_10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_10590 PF02690 Na+/Pi-cotransporter HPY15_10595 PF00303 Thymidylate synthase HPY15_10600 PF01790 Prolipoprotein diacylglyceryl transferase HPY15_10605 PF01925 Sulfite exporter TauE/SafE HPY15_10610 PF05524 PEP-utilising enzyme, N-terminal HPY15_10610 PF02896 PEP-utilising enzyme, TIM barrel domain HPY15_10610 PF01590 GAF domain HPY15_10610 PF00391 PEP-utilising enzyme, mobile domain HPY15_10615 PF00293 NUDIX domain HPY15_10620 PF02976 DNA mismatch repair enzyme MutH HPY15_10625 PF00248 Aldo/keto reductase family HPY15_10635 PF00072 Response regulator receiver domain HPY15_10635 PF00158 Sigma-54 interaction domain HPY15_10635 PF02954 Bacterial regulatory protein, Fis family HPY15_10640 PF00152 tRNA synthetases class II (D, K and N) HPY15_10640 PF01336 OB-fold nucleic acid binding domain HPY15_10650 PF05525 Branched-chain amino acid transport protein HPY15_10655 PF05175 Methyltransferase small domain HPY15_10660 PF00271 Helicase conserved C-terminal domain HPY15_10660 PF00270 DEAD/DEAH box helicase HPY15_10665 PF00009 Elongation factor Tu GTP binding domain HPY15_10665 PF03144 Elongation factor Tu domain 2 HPY15_10665 PF16658 Class II release factor RF3, C-terminal domain HPY15_10670 PF00563 EAL domain HPY15_10670 PF00990 Diguanylate cyclase, GGDEF domain HPY15_10670 PF03707 Bacterial signalling protein N terminal repeat HPY15_10685 PF13508 Acetyltransferase (GNAT) domain HPY15_10690 PF02036 SCP-2 sterol transfer family HPY15_10695 PF00563 EAL domain HPY15_10695 PF00990 Diguanylate cyclase, GGDEF domain HPY15_10695 PF03707 Bacterial signalling protein N terminal repeat HPY15_10700 PF01136 Peptidase family U32 HPY15_10705 PF01136 Peptidase family U32 HPY15_10720 PF07719 Tetratricopeptide repeat HPY15_10720 PF13181 Tetratricopeptide repeat HPY15_10725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HPY15_10725 PF03725 3' exoribonuclease family, domain 2 HPY15_10725 PF00013 KH domain HPY15_10725 PF01138 3' exoribonuclease family, domain 1 HPY15_10725 PF00575 S1 RNA binding domain HPY15_10730 PF00312 Ribosomal protein S15 HPY15_10735 PF09157 Pseudouridine synthase II TruB, C-terminal HPY15_10735 PF16198 tRNA pseudouridylate synthase B C-terminal domain HPY15_10735 PF01509 TruB family pseudouridylate synthase (N terminal domain) HPY15_10740 PF02033 Ribosome-binding factor A HPY15_10745 PF00009 Elongation factor Tu GTP binding domain HPY15_10745 PF04760 Translation initiation factor IF-2, N-terminal region HPY15_10745 PF08364 Bacterial translation initiation factor IF-2 associated region HPY15_10745 PF11987 Translation-initiation factor 2 HPY15_10750 PF08529 NusA N-terminal domain HPY15_10750 PF00575 S1 RNA binding domain HPY15_10750 PF13184 NusA-like KH domain HPY15_10755 PF02576 RimP N-terminal domain HPY15_10755 PF17384 RimP C-terminal SH3 domain HPY15_10770 PF03840 Preprotein translocase SecG subunit HPY15_10775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY15_10775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY15_10775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY15_10775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY15_10780 PF00809 Pterin binding enzyme HPY15_10785 PF17862 AAA+ lid domain HPY15_10785 PF00004 ATPase family associated with various cellular activities (AAA) HPY15_10785 PF01434 Peptidase family M41 HPY15_10785 PF06480 FtsH Extracellular HPY15_10790 PF01728 FtsJ-like methyltransferase HPY15_10795 PF01985 CRS1 / YhbY (CRM) domain HPY15_10800 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY15_10800 PF03449 Transcription elongation factor, N-terminal HPY15_10805 PF13609 Gram-negative porin HPY15_10810 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HPY15_10815 PF01479 S4 domain HPY15_10815 PF00579 tRNA synthetases class I (W and Y) HPY15_10820 PF01551 Peptidase family M23 HPY15_10820 PF04225 Opacity-associated protein A LysM-like domain HPY15_10825 PF00873 AcrB/AcrD/AcrF family HPY15_10835 PF01521 Iron-sulphur cluster biosynthesis HPY15_10840 PF00202 Aminotransferase class-III HPY15_10845 PF01594 AI-2E family transporter HPY15_10850 PF05175 Methyltransferase small domain HPY15_10850 PF08468 Methyltransferase small domain N-terminal HPY15_10855 PF00072 Response regulator receiver domain HPY15_10855 PF17149 Periplasmic sensor domain found in signal transduction proteins HPY15_10855 PF00672 HAMP domain HPY15_10855 PF01627 Hpt domain HPY15_10855 PF00512 His Kinase A (phospho-acceptor) domain HPY15_10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_10860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY15_10865 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_10870 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_10870 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY15_10875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_10875 PF00005 ABC transporter HPY15_10880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_10880 PF00005 ABC transporter HPY15_10890 PF01869 BadF/BadG/BcrA/BcrD ATPase family HPY15_10895 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY15_10895 PF02838 Glycosyl hydrolase family 20, domain 2 HPY15_10900 PF06165 Glycosyltransferase family 36 HPY15_10900 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HPY15_10905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY15_10905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY15_10905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY15_10905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY15_10910 PF00005 ABC transporter HPY15_10910 PF08402 TOBE domain HPY15_10920 PF13416 Bacterial extracellular solute-binding protein HPY15_10925 PF00909 Ammonium Transporter Family HPY15_10930 PF00543 Nitrogen regulatory protein P-II HPY15_10935 PF06062 Uncharacterised protein family (UPF0231) HPY15_10940 PF11791 Aconitate B N-terminal domain HPY15_10940 PF06434 Aconitate hydratase 2 N-terminus HPY15_10940 PF00330 Aconitase family (aconitate hydratase) HPY15_10945 PF01734 Patatin-like phospholipase HPY15_10950 PF14814 Bifunctional transglycosylase second domain HPY15_10950 PF00905 Penicillin binding protein transpeptidase domain HPY15_10950 PF00912 Transglycosylase HPY15_10955 PF00270 DEAD/DEAH box helicase HPY15_10955 PF08482 ATP-dependent helicase C-terminal HPY15_10955 PF00271 Helicase conserved C-terminal domain HPY15_10955 PF04408 Helicase associated domain (HA2) HPY15_10965 PF03749 Sugar fermentation stimulation protein RE domain HPY15_10965 PF17746 SfsA N-terminal OB domain HPY15_10970 PF01258 Prokaryotic dksA/traR C4-type zinc finger HPY15_10975 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY15_10980 PF01743 Poly A polymerase head domain HPY15_10980 PF12626 Polymerase A arginine-rich C-terminus HPY15_10980 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY15_10985 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY15_10990 PF02548 Ketopantoate hydroxymethyltransferase HPY15_10995 PF02569 Pantoate-beta-alanine ligase HPY15_11000 PF01061 ABC-2 type transporter HPY15_11005 PF00005 ABC transporter HPY15_11010 PF00916 Sulfate permease family HPY15_11010 PF01740 STAS domain HPY15_11015 PF00484 Carbonic anhydrase HPY15_11020 PF00156 Phosphoribosyl transferase domain HPY15_11025 PF00440 Bacterial regulatory proteins, tetR family HPY15_11030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY15_11035 PF04348 LppC putative lipoprotein HPY15_11040 PF02021 Uncharacterised protein family UPF0102 HPY15_11045 PF13580 SIS domain HPY15_11050 PF04972 BON domain HPY15_11055 PF04386 Stringent starvation protein B HPY15_11060 PF02798 Glutathione S-transferase, N-terminal domain HPY15_11060 PF00043 Glutathione S-transferase, C-terminal domain HPY15_11065 PF02167 Cytochrome C1 family HPY15_11070 PF00033 Cytochrome b/b6/petB HPY15_11070 PF00032 Cytochrome b(C-terminal)/b6/petD HPY15_11075 PF00355 Rieske [2Fe-2S] domain HPY15_11075 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HPY15_11080 PF00380 Ribosomal protein S9/S16 HPY15_11085 PF00572 Ribosomal protein L13 HPY15_11090 PF03969 AFG1-like ATPase HPY15_11100 PF00595 PDZ domain HPY15_11105 PF13180 PDZ domain HPY15_11110 PF01245 Ribosomal protein L19 HPY15_11115 PF01746 tRNA (Guanine-1)-methyltransferase HPY15_11120 PF05239 PRC-barrel domain HPY15_11120 PF01782 RimM N-terminal domain HPY15_11125 PF00886 Ribosomal protein S16 HPY15_11130 PF00448 SRP54-type protein, GTPase domain HPY15_11130 PF02881 SRP54-type protein, helical bundle domain HPY15_11130 PF02978 Signal peptide binding domain HPY15_11135 PF01578 Cytochrome C assembly protein HPY15_11140 PF00571 CBS domain HPY15_11140 PF01595 Cyclin M transmembrane N-terminal domain HPY15_11140 PF03471 Transporter associated domain HPY15_11145 PF02664 S-Ribosylhomocysteinase (LuxS) HPY15_11150 PF04262 Glutamate-cysteine ligase HPY15_11155 PF05193 Peptidase M16 inactive domain HPY15_11155 PF00675 Insulinase (Peptidase family M16) HPY15_11160 PF09335 SNARE associated Golgi protein HPY15_11170 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY15_11175 PF02436 Conserved carboxylase domain HPY15_11175 PF00364 Biotin-requiring enzyme HPY15_11175 PF00682 HMGL-like HPY15_11180 PF04277 Oxaloacetate decarboxylase, gamma chain HPY15_11225 PF02599 Global regulator protein family HPY15_11230 PF00696 Amino acid kinase family HPY15_11230 PF13840 ACT domain HPY15_11230 PF01842 ACT domain HPY15_11235 PF01411 tRNA synthetases class II (A) HPY15_11235 PF02272 DHHA1 domain HPY15_11235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY15_11240 PF02631 RecX family HPY15_11245 PF00154 recA bacterial DNA recombination protein HPY15_11250 PF02464 Competence-damaged protein HPY15_11255 PF00005 ABC transporter HPY15_11255 PF12857 TOBE-like domain HPY15_11260 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_11265 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_11275 PF00291 Pyridoxal-phosphate dependent enzyme HPY15_11280 PF01624 MutS domain I HPY15_11280 PF05188 MutS domain II HPY15_11280 PF05192 MutS domain III HPY15_11280 PF05190 MutS family domain IV HPY15_11280 PF00488 MutS domain V HPY15_11285 PF04539 Sigma-70 region 3 HPY15_11285 PF00140 Sigma-70 factor, region 1.2 HPY15_11285 PF04545 Sigma-70, region 4 HPY15_11285 PF04542 Sigma-70 region 2 HPY15_11290 PF01551 Peptidase family M23 HPY15_11290 PF01476 LysM domain HPY15_11300 PF01975 Survival protein SurE HPY15_11305 PF01142 tRNA pseudouridine synthase D (TruD) HPY15_11310 PF02542 YgbB family HPY15_11315 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPY15_11320 PF04977 Septum formation initiator HPY15_11325 PF02673 Bacitracin resistance protein BacA HPY15_11330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY15_11335 PF02152 Dihydroneopterin aldolase HPY15_11340 PF02660 Glycerol-3-phosphate acyltransferase HPY15_11345 PF00561 alpha/beta hydrolase fold HPY15_11350 PF00814 Glycoprotease family HPY15_11355 PF01165 Ribosomal protein S21 HPY15_11360 PF09424 Yqey-like protein HPY15_11365 PF08278 DNA primase DnaG DnaB-binding HPY15_11365 PF08275 DNA primase catalytic core, N-terminal domain HPY15_11365 PF10410 DnaB-helicase binding domain of primase HPY15_11365 PF01807 CHC2 zinc finger HPY15_11370 PF04546 Sigma-70, non-essential region HPY15_11370 PF03979 Sigma-70 factor, region 1.1 HPY15_11370 PF00140 Sigma-70 factor, region 1.2 HPY15_11370 PF04542 Sigma-70 region 2 HPY15_11370 PF04539 Sigma-70 region 3 HPY15_11370 PF04545 Sigma-70, region 4 HPY15_11385 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY15_11390 PF01380 SIS domain HPY15_11395 PF00455 DeoR C terminal sensor domain HPY15_11395 PF08220 DeoR-like helix-turn-helix domain HPY15_11400 PF00224 Pyruvate kinase, barrel domain HPY15_11400 PF02887 Pyruvate kinase, alpha/beta domain HPY15_11405 PF02281 Transposase Tn5 dimerisation domain HPY15_11405 PF14706 Transposase DNA-binding HPY15_11405 PF01609 Transposase DDE domain HPY15_11410 PF04402 Protein of unknown function (DUF541) HPY15_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_11415 PF03466 LysR substrate binding domain HPY15_11420 PF01810 LysE type translocator HPY15_11425 PF00924 Mechanosensitive ion channel HPY15_11425 PF05552 Conserved TM helix HPY15_11430 PF01116 Fructose-bisphosphate aldolase class-II HPY15_11435 PF00162 Phosphoglycerate kinase HPY15_11440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY15_11440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY15_11445 PF00593 TonB dependent receptor HPY15_11445 PF07715 TonB-dependent Receptor Plug Domain HPY15_11450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_11450 PF03466 LysR substrate binding domain HPY15_11455 PF00456 Transketolase, thiamine diphosphate binding domain HPY15_11455 PF02780 Transketolase, C-terminal domain HPY15_11455 PF02779 Transketolase, pyrimidine binding domain HPY15_11460 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPY15_11460 PF02772 S-adenosylmethionine synthetase, central domain HPY15_11460 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPY15_11465 PF10263 SprT-like family HPY15_11465 PF17283 SprT-like zinc ribbon domain HPY15_11470 PF04231 Endonuclease I HPY15_11475 PF04452 RNA methyltransferase HPY15_11480 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HPY15_11480 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HPY15_11485 PF02622 Uncharacterized ACR, COG1678 HPY15_11490 PF03652 Holliday junction resolvase HPY15_11495 PF01479 S4 domain HPY15_11495 PF00579 tRNA synthetases class I (W and Y) HPY15_11505 PF00437 Type II/IV secretion system protein HPY15_11510 PF00437 Type II/IV secretion system protein HPY15_11515 PF01168 Alanine racemase, N-terminal domain HPY15_11520 PF03807 NADP oxidoreductase coenzyme F420-dependent HPY15_11520 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPY15_11525 PF02325 YGGT family HPY15_11530 PF02594 Uncharacterised ACR, YggU family COG1872 HPY15_11540 PF01725 Ham1 family HPY15_11545 PF04055 Radical SAM superfamily HPY15_11545 PF06969 HemN C-terminal domain HPY15_11550 PF04960 Glutaminase HPY15_11555 PF02390 Putative methyltransferase HPY15_11560 PF10576 Iron-sulfur binding domain of endonuclease III HPY15_11560 PF14815 NUDIX domain HPY15_11560 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY15_11560 PF00633 Helix-hairpin-helix motif HPY15_11565 PF04362 Bacterial Fe(2+) trafficking HPY15_11570 PF01464 Transglycosylase SLT domain HPY15_11570 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HPY15_11595 PF17200 Single Cache domain 2 HPY15_11595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_11595 PF00672 HAMP domain HPY15_11625 PF05099 Tellurite resistance protein TerB HPY15_11625 PF00226 DnaJ domain HPY15_11630 PF04453 LPS transport system D HPY15_11630 PF03968 OstA-like protein HPY15_11635 PF09312 SurA N-terminal domain HPY15_11640 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HPY15_11645 PF00398 Ribosomal RNA adenine dimethylase HPY15_11650 PF04379 ApaG domain HPY15_11655 PF00149 Calcineurin-like phosphoesterase HPY15_11660 PF00186 Dihydrofolate reductase HPY15_11665 PF12821 Threonine/Serine exporter, ThrE HPY15_11670 PF06738 Putative threonine/serine exporter HPY15_11675 PF01018 GTP1/OBG HPY15_11675 PF01926 50S ribosome-binding GTPase HPY15_11680 PF01016 Ribosomal L27 protein HPY15_11685 PF00829 Ribosomal prokaryotic L21 protein HPY15_11690 PF00348 Polyprenyl synthetase HPY15_11695 PF13520 Amino acid permease HPY15_11700 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HPY15_11700 PF00056 lactate/malate dehydrogenase, NAD binding domain HPY15_11705 PF02863 Arginine repressor, C-terminal domain HPY15_11705 PF01316 Arginine repressor, DNA binding domain HPY15_11710 PF16868 NMT1-like family HPY15_11720 PF00582 Universal stress protein family HPY15_11735 PF06877 Regulator of ribonuclease activity B HPY15_11745 PF01523 Putative modulator of DNA gyrase HPY15_11750 PF00795 Carbon-nitrogen hydrolase HPY15_11755 PF13116 Protein of unknown function HPY15_11755 PF13502 AsmA-like C-terminal region HPY15_11760 PF10150 Ribonuclease E/G family HPY15_11760 PF00575 S1 RNA binding domain HPY15_11765 PF02545 Maf-like protein HPY15_11770 PF04093 rod shape-determining protein MreD HPY15_11775 PF04085 rod shape-determining protein MreC HPY15_11810 PF00114 Pilin (bacterial filament) HPY15_11810 PF07963 Prokaryotic N-terminal methylation motif HPY15_11815 PF00114 Pilin (bacterial filament) HPY15_11815 PF07963 Prokaryotic N-terminal methylation motif HPY15_11825 PF00482 Type II secretion system (T2SS), protein F HPY15_11830 PF00437 Type II/IV secretion system protein HPY15_11840 PF13401 AAA domain HPY15_11840 PF01471 Putative peptidoglycan binding domain HPY15_11845 PF03958 Bacterial type II/III secretion system short domain HPY15_11845 PF00263 Bacterial type II and III secretion system protein HPY15_11865 PF00990 Diguanylate cyclase, GGDEF domain HPY15_11865 PF00563 EAL domain HPY15_11865 PF17157 Gammaproteobacterial periplasmic sensor domain HPY15_11870 PF00436 Single-strand binding protein family HPY15_11875 PF00196 Bacterial regulatory proteins, luxR family HPY15_11880 PF00483 Nucleotidyl transferase HPY15_11885 PF17760 UvrA interaction domain HPY15_11885 PF17755 UvrA DNA-binding domain HPY15_11885 PF00005 ABC transporter HPY15_11895 PF00266 Aminotransferase class-V HPY15_11900 PF00696 Amino acid kinase family HPY15_11900 PF01842 ACT domain HPY15_11905 PF02965 Vitamin B12 dependent methionine synthase, activation domain HPY15_11905 PF02607 B12 binding domain HPY15_11905 PF00809 Pterin binding enzyme HPY15_11905 PF02574 Homocysteine S-methyltransferase HPY15_11905 PF02310 B12 binding domain HPY15_11910 PF00999 Sodium/hydrogen exchanger family HPY15_11945 PF01507 Phosphoadenosine phosphosulfate reductase family HPY15_11950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HPY15_11950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HPY15_11955 PF00175 Oxidoreductase NAD-binding domain HPY15_11955 PF00258 Flavodoxin HPY15_11955 PF00667 FAD binding domain HPY15_11975 PF09583 Phage shock protein G (Phageshock_PspG) HPY15_11980 PF01207 Dihydrouridine synthase (Dus) HPY15_11985 PF01475 Ferric uptake regulator family HPY15_11995 PF12706 Beta-lactamase superfamily domain HPY15_12000 PF00342 Phosphoglucose isomerase HPY15_12005 PF01894 Uncharacterised protein family UPF0047 HPY15_12010 PF00842 Alanine racemase, C-terminal domain HPY15_12010 PF01168 Alanine racemase, N-terminal domain HPY15_12015 PF00772 DnaB-like helicase N terminal domain HPY15_12015 PF03796 DnaB-like helicase C terminal domain HPY15_12025 PF01281 Ribosomal protein L9, N-terminal domain HPY15_12025 PF03948 Ribosomal protein L9, C-terminal domain HPY15_12030 PF01084 Ribosomal protein S18 HPY15_12035 PF00436 Single-strand binding protein family HPY15_12040 PF01250 Ribosomal protein S6 HPY15_12045 PF00210 Ferritin-like domain HPY15_12050 PF04324 BFD-like [2Fe-2S] binding domain HPY15_12055 PF03144 Elongation factor Tu domain 2 HPY15_12055 PF00009 Elongation factor Tu GTP binding domain HPY15_12055 PF03143 Elongation factor Tu C-terminal domain HPY15_12060 PF14492 Elongation Factor G, domain II HPY15_12060 PF03144 Elongation factor Tu domain 2 HPY15_12060 PF00009 Elongation factor Tu GTP binding domain HPY15_12060 PF03764 Elongation factor G, domain IV HPY15_12060 PF00679 Elongation factor G C-terminus HPY15_12065 PF00177 Ribosomal protein S7p/S5e HPY15_12070 PF00164 Ribosomal protein S12/S23 HPY15_12080 PF02635 DsrE/DsrF-like family HPY15_12085 PF02635 DsrE/DsrF-like family HPY15_12090 PF08348 YheO-like PAS domain HPY15_12090 PF13309 HTH domain HPY15_12095 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY15_12095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY15_12105 PF04102 SlyX HPY15_12110 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HPY15_12115 PF01145 SPFH domain / Band 7 family HPY15_12120 PF01145 SPFH domain / Band 7 family HPY15_12120 PF12221 Bacterial membrane protein N terminal HPY15_12125 PF16360 GTP-binding GTPase Middle Region HPY15_12125 PF13167 GTP-binding GTPase N-terminal HPY15_12125 PF01926 50S ribosome-binding GTPase HPY15_12130 PF17209 Hfq protein HPY15_12140 PF01119 DNA mismatch repair protein, C-terminal domain HPY15_12140 PF08676 MutL C terminal dimerisation domain HPY15_12145 PF01520 N-acetylmuramoyl-L-alanine amidase HPY15_12150 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HPY15_12155 PF08331 Domain of unknown function (DUF1730) HPY15_12200 PF00929 Exonuclease HPY15_12205 PF03193 RsgA GTPase HPY15_12210 PF02666 Phosphatidylserine decarboxylase HPY15_12215 PF00939 Sodium:sulfate symporter transmembrane region HPY15_12225 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HPY15_12225 PF01676 Metalloenzyme superfamily HPY15_12235 PF01797 Transposase IS200 like HPY15_12240 PF01551 Peptidase family M23 HPY15_12250 PF00440 Bacterial regulatory proteins, tetR family HPY15_12250 PF08360 QacR-like protein, C-terminal region HPY15_12255 PF01208 Uroporphyrinogen decarboxylase (URO-D) HPY15_12260 PF09297 NADH pyrophosphatase zinc ribbon domain HPY15_12260 PF00293 NUDIX domain HPY15_12265 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HPY15_12270 PF05000 RNA polymerase Rpb1, domain 4 HPY15_12270 PF04997 RNA polymerase Rpb1, domain 1 HPY15_12270 PF04983 RNA polymerase Rpb1, domain 3 HPY15_12270 PF00623 RNA polymerase Rpb1, domain 2 HPY15_12270 PF04998 RNA polymerase Rpb1, domain 5 HPY15_12275 PF04561 RNA polymerase Rpb2, domain 2 HPY15_12275 PF10385 RNA polymerase beta subunit external 1 domain HPY15_12275 PF00562 RNA polymerase Rpb2, domain 6 HPY15_12275 PF04565 RNA polymerase Rpb2, domain 3 HPY15_12275 PF04560 RNA polymerase Rpb2, domain 7 HPY15_12275 PF04563 RNA polymerase beta subunit HPY15_12280 PF00542 Ribosomal protein L7/L12 C-terminal domain HPY15_12280 PF16320 Ribosomal protein L7/L12 dimerisation domain HPY15_12285 PF00466 Ribosomal protein L10 HPY15_12290 PF00687 Ribosomal protein L1p/L10e family HPY15_12295 PF03946 Ribosomal protein L11, N-terminal domain HPY15_12295 PF00298 Ribosomal protein L11, RNA binding domain HPY15_12300 PF00467 KOW motif HPY15_12300 PF02357 Transcription termination factor nusG HPY15_12305 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HPY15_12310 PF00009 Elongation factor Tu GTP binding domain HPY15_12310 PF03144 Elongation factor Tu domain 2 HPY15_12310 PF03143 Elongation factor Tu C-terminal domain HPY15_12335 PF00485 Phosphoribulokinase / Uridine kinase family HPY15_12340 PF02237 Biotin protein ligase C terminal domain HPY15_12340 PF08279 HTH domain HPY15_12340 PF03099 Biotin/lipoate A/B protein ligase family HPY15_12345 PF01565 FAD binding domain HPY15_12345 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPY15_12355 PF13091 PLD-like domain HPY15_12420 PF00175 Oxidoreductase NAD-binding domain HPY15_12425 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY15_12425 PF00970 Oxidoreductase FAD-binding domain HPY15_12425 PF00175 Oxidoreductase NAD-binding domain HPY15_12430 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HPY15_12440 PF07498 Rho termination factor, N-terminal domain HPY15_12440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY15_12440 PF07497 Rho termination factor, RNA-binding domain HPY15_12445 PF00085 Thioredoxin HPY15_12450 PF00271 Helicase conserved C-terminal domain HPY15_12450 PF00270 DEAD/DEAH box helicase HPY15_12455 PF02541 Ppx/GppA phosphatase family HPY15_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_12460 PF00072 Response regulator receiver domain HPY15_12460 PF09456 RcsC Alpha-Beta-Loop (ABL) HPY15_12460 PF00512 His Kinase A (phospho-acceptor) domain HPY15_12465 PF12832 MFS_1 like family HPY15_12480 PF13193 AMP-binding enzyme C-terminal domain HPY15_12480 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY15_12480 PF00501 AMP-binding enzyme HPY15_12485 PF01220 Dehydroquinase class II HPY15_12490 PF00364 Biotin-requiring enzyme HPY15_12495 PF02785 Biotin carboxylase C-terminal domain HPY15_12495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY15_12495 PF00289 Biotin carboxylase, N-terminal domain HPY15_12505 PF01207 Dihydrouridine synthase (Dus) HPY15_12510 PF02954 Bacterial regulatory protein, Fis family HPY15_12515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY15_12515 PF00356 Bacterial regulatory proteins, lacI family HPY15_12520 PF00920 Dehydratase family HPY15_12525 PF01202 Shikimate kinase HPY15_12530 PF02447 GntP family permease HPY15_12535 PF01081 KDPG and KHG aldolase HPY15_12540 PF07715 TonB-dependent Receptor Plug Domain HPY15_12540 PF00593 TonB dependent receptor HPY15_12555 PF00672 HAMP domain HPY15_12555 PF17200 Single Cache domain 2 HPY15_12555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_12560 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY15_12560 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY15_12560 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY15_12565 PF13520 Amino acid permease HPY15_12570 PF00486 Transcriptional regulatory protein, C terminal HPY15_12570 PF18500 CadC C-terminal domain 1 HPY15_12575 PF13411 MerR HTH family regulatory protein HPY15_12585 PF02142 MGS-like domain HPY15_12585 PF01808 AICARFT/IMPCHase bienzyme HPY15_12590 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPY15_12590 PF02844 Phosphoribosylglycinamide synthetase, N domain HPY15_12590 PF02843 Phosphoribosylglycinamide synthetase, C domain HPY15_12600 PF00216 Bacterial DNA-binding protein HPY15_12605 PF00571 CBS domain HPY15_12605 PF01595 Cyclin M transmembrane N-terminal domain HPY15_12630 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HPY15_12640 PF06082 Exopolysaccharide biosynthesis protein YbjH HPY15_12645 PF04222 Protein of unknown function (DUF416) HPY15_12650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY15_12655 PF03167 Uracil DNA glycosylase superfamily HPY15_12660 PF00924 Mechanosensitive ion channel HPY15_12670 PF02719 Polysaccharide biosynthesis protein HPY15_12675 PF02397 Bacterial sugar transferase HPY15_12680 PF01370 NAD dependent epimerase/dehydratase family HPY15_12685 PF13579 Glycosyl transferase 4-like domain HPY15_12690 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY15_12695 PF01370 NAD dependent epimerase/dehydratase family HPY15_12700 PF08485 Polysaccharide biosynthesis protein C-terminal HPY15_12700 PF02719 Polysaccharide biosynthesis protein HPY15_12705 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_12730 PF02348 Cytidylyltransferase HPY15_12735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY15_12735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPY15_12740 PF00483 Nucleotidyl transferase HPY15_12750 PF08666 SAF domain HPY15_12750 PF03102 NeuB family HPY15_12755 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY15_12760 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPY15_12765 PF02719 Polysaccharide biosynthesis protein HPY15_12770 PF13808 DDE_Tnp_1-associated HPY15_12770 PF01609 Transposase DDE domain HPY15_12775 PF13737 Transposase DDE domain HPY15_12780 PF02706 Chain length determinant protein HPY15_12785 PF01370 NAD dependent epimerase/dehydratase family HPY15_12790 PF00457 Glycosyl hydrolases family 11 HPY15_12790 PF01522 Polysaccharide deacetylase HPY15_12795 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_12810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY15_12815 PF04488 Glycosyltransferase sugar-binding region containing DXD motif HPY15_12820 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HPY15_12845 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_12850 PF01757 Acyltransferase family HPY15_12860 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY15_12865 PF00535 Glycosyl transferase family 2 HPY15_12870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY15_12875 PF01467 Cytidylyltransferase-like HPY15_12880 PF06827 Zinc finger found in FPG and IleRS HPY15_12880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HPY15_12880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HPY15_12890 PF00471 Ribosomal protein L33 HPY15_12895 PF00830 Ribosomal L28 family HPY15_12900 PF04002 RadC-like JAB domain HPY15_12905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_12905 PF02743 Cache domain HPY15_12905 PF00672 HAMP domain HPY15_12910 PF02441 Flavoprotein HPY15_12910 PF04127 DNA / pantothenate metabolism flavoprotein HPY15_12920 PF00440 Bacterial regulatory proteins, tetR family HPY15_12925 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY15_12930 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY15_12935 PF00156 Phosphoribosyl transferase domain HPY15_12940 PF01138 3' exoribonuclease family, domain 1 HPY15_12940 PF03725 3' exoribonuclease family, domain 2 HPY15_12945 PF08340 Domain of unknown function (DUF1732) HPY15_12945 PF03755 YicC-like family, N-terminal region HPY15_12995 PF12161 HsdM N-terminal domain HPY15_12995 PF02384 N-6 DNA Methylase HPY15_13000 PF01420 Type I restriction modification DNA specificity domain HPY15_13010 PF12008 Type I restriction and modification enzyme - subunit R C terminal HPY15_13010 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPY15_13010 PF18766 SWI2/SNF2 ATPase HPY15_13015 PF03350 Uncharacterized protein family, UPF0114 HPY15_13020 PF00367 phosphotransferase system, EIIB HPY15_13020 PF02378 Phosphotransferase system, EIIC HPY15_13025 PF13580 SIS domain HPY15_13030 PF01380 SIS domain HPY15_13030 PF01418 Helix-turn-helix domain, rpiR family HPY15_13035 PF01032 FecCD transport family HPY15_13040 PF01497 Periplasmic binding protein HPY15_13045 PF00005 ABC transporter HPY15_13050 PF07715 TonB-dependent Receptor Plug Domain HPY15_13050 PF00593 TonB dependent receptor HPY15_13055 PF00664 ABC transporter transmembrane region HPY15_13055 PF00005 ABC transporter HPY15_13070 PF16124 RecQ zinc-binding HPY15_13070 PF00270 DEAD/DEAH box helicase HPY15_13070 PF00570 HRDC domain HPY15_13070 PF00271 Helicase conserved C-terminal domain HPY15_13070 PF09382 RQC domain HPY15_13075 PF00892 EamA-like transporter family HPY15_13085 PF12833 Helix-turn-helix domain HPY15_13090 PF01810 LysE type translocator HPY15_13095 PF13361 UvrD-like helicase C-terminal domain HPY15_13095 PF00580 UvrD/REP helicase N-terminal domain HPY15_13100 PF01432 Peptidase family M3 HPY15_13105 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HPY15_13110 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_13110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY15_13120 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY15_13120 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_13130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY15_13135 PF00005 ABC transporter HPY15_13135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_13170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY15_13175 PF13361 UvrD-like helicase C-terminal domain HPY15_13175 PF00580 UvrD/REP helicase N-terminal domain HPY15_13180 PF00440 Bacterial regulatory proteins, tetR family HPY15_13185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY15_13190 PF00873 AcrB/AcrD/AcrF family HPY15_13195 PF04380 Membrane fusogenic activity HPY15_13200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HPY15_13200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HPY15_13205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_13205 PF03466 LysR substrate binding domain HPY15_13275 PF12724 Flavodoxin domain HPY15_13280 PF02386 Cation transport protein HPY15_13285 PF01205 Uncharacterized protein family UPF0029 HPY15_13285 PF09186 Domain of unknown function (DUF1949) HPY15_13290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY15_13290 PF00378 Enoyl-CoA hydratase/isomerase HPY15_13290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY15_13295 PF02803 Thiolase, C-terminal domain HPY15_13295 PF00108 Thiolase, N-terminal domain HPY15_13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_13300 PF03466 LysR substrate binding domain HPY15_13305 PF07690 Major Facilitator Superfamily HPY15_13310 PF12804 MobA-like NTP transferase domain HPY15_13310 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_13315 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HPY15_13315 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HPY15_13320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY15_13320 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY15_13325 PF00231 ATP synthase HPY15_13330 PF00306 ATP synthase alpha/beta chain, C terminal domain HPY15_13330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY15_13330 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY15_13335 PF00213 ATP synthase delta (OSCP) subunit HPY15_13340 PF00430 ATP synthase B/B' CF(0) HPY15_13345 PF00137 ATP synthase subunit C HPY15_13350 PF00119 ATP synthase A chain HPY15_13355 PF03899 ATP synthase I chain HPY15_13360 PF17762 HTH domain found in ParB protein HPY15_13360 PF02195 ParB-like nuclease domain HPY15_13365 PF13614 AAA domain HPY15_13370 PF02527 rRNA small subunit methyltransferase G HPY15_13375 PF01134 Glucose inhibited division protein A HPY15_13375 PF13932 GidA associated domain HPY15_13380 PF00258 Flavodoxin HPY15_13385 PF01926 50S ribosome-binding GTPase HPY15_13385 PF12631 MnmE helical domain HPY15_13385 PF10396 GTP-binding protein TrmE N-terminus HPY15_13390 PF14849 YidC periplasmic domain HPY15_13390 PF02096 60Kd inner membrane protein HPY15_13395 PF01809 Putative membrane protein insertion efficiency factor HPY15_13400 PF00825 Ribonuclease P HPY15_13405 PF00468 Ribosomal protein L34 HPY15_13410 PF00005 ABC transporter HPY15_13415 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_13420 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_13425 PF08775 ParB family HPY15_13425 PF02195 ParB-like nuclease domain HPY15_13430 PF18607 ParA helix turn helix domain HPY15_13430 PF13614 AAA domain HPY15_13455 PF01709 Transcriptional regulator HPY15_13460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HPY15_13460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY15_13465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_13465 PF17200 Single Cache domain 2 HPY15_13465 PF00672 HAMP domain HPY15_13470 PF10928 Protein of unknown function (DUF2810) HPY15_13475 PF17874 MalT-like TPR region HPY15_13475 PF00196 Bacterial regulatory proteins, luxR family HPY15_13480 PF00343 Carbohydrate phosphorylase HPY15_13485 PF02446 4-alpha-glucanotransferase HPY15_13490 PF00128 Alpha amylase, catalytic domain HPY15_13490 PF02806 Alpha amylase, C-terminal all-beta domain HPY15_13490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY15_13495 PF05638 Type VI secretion system effector, Hcp HPY15_13500 PF04717 Type VI secretion system, phage-baseplate injector HPY15_13500 PF16671 Actin cross-linking domain HPY15_13525 PF00842 Alanine racemase, C-terminal domain HPY15_13525 PF01168 Alanine racemase, N-terminal domain HPY15_13525 PF01757 Acyltransferase family HPY15_13535 PF00939 Sodium:sulfate symporter transmembrane region HPY15_13540 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY15_13545 PF08329 Chitinase A, N-terminal domain HPY15_13545 PF00704 Glycosyl hydrolases family 18 HPY15_13560 PF02743 Cache domain HPY15_13560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_13560 PF00672 HAMP domain HPY15_13580 PF01569 PAP2 superfamily HPY15_13585 PF04389 Peptidase family M28 HPY15_13585 PF02225 PA domain HPY15_13590 PF00375 Sodium:dicarboxylate symporter family HPY15_13600 PF02630 SCO1/SenC HPY15_13615 PF03616 Sodium/glutamate symporter HPY15_13620 PF12945 Flagellar protein YcgR HPY15_13620 PF07238 PilZ domain HPY15_13635 PF00990 Diguanylate cyclase, GGDEF domain HPY15_13650 PF01048 Phosphorylase superfamily HPY15_13655 PF08349 Protein of unknown function (DUF1722) HPY15_13660 PF13411 MerR HTH family regulatory protein HPY15_13665 PF03441 FAD binding domain of DNA photolyase HPY15_13665 PF00875 DNA photolyase HPY15_13670 PF17969 L,D-transpeptidase C-terminal domain HPY15_13670 PF03734 L,D-transpeptidase catalytic domain HPY15_13670 PF01476 LysM domain HPY15_13680 PF00271 Helicase conserved C-terminal domain HPY15_13680 PF00270 DEAD/DEAH box helicase HPY15_13685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HPY15_13685 PF00326 Prolyl oligopeptidase family HPY15_13690 PF07715 TonB-dependent Receptor Plug Domain HPY15_13690 PF00593 TonB dependent receptor HPY15_13710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_13710 PF12729 Four helix bundle sensory module for signal transduction HPY15_13710 PF00672 HAMP domain HPY15_13715 PF12849 PBP superfamily domain HPY15_13720 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_13725 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_13730 PF00005 ABC transporter HPY15_13735 PF03707 Bacterial signalling protein N terminal repeat HPY15_13735 PF00990 Diguanylate cyclase, GGDEF domain HPY15_13735 PF00563 EAL domain HPY15_13755 PF01740 STAS domain HPY15_13755 PF00916 Sulfate permease family HPY15_13765 PF01476 LysM domain HPY15_13765 PF08525 Opacity-associated protein A N-terminal motif HPY15_13765 PF01551 Peptidase family M23 HPY15_13770 PF13188 PAS domain HPY15_13770 PF03707 Bacterial signalling protein N terminal repeat HPY15_13770 PF00990 Diguanylate cyclase, GGDEF domain HPY15_13770 PF00563 EAL domain HPY15_13775 PF03466 LysR substrate binding domain HPY15_13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_13780 PF07690 Major Facilitator Superfamily HPY15_13785 PF00376 MerR family regulatory protein HPY15_13785 PF09278 MerR, DNA binding HPY15_13800 PF00375 Sodium:dicarboxylate symporter family HPY15_13810 PF02001 Protein of unknown function DUF134 HPY15_13830 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY15_13830 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY15_13830 PF01483 Proprotein convertase P-domain HPY15_13830 PF01447 Thermolysin metallopeptidase, catalytic domain HPY15_13840 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HPY15_13840 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HPY15_13845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY15_13845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPY15_13850 PF00581 Rhodanese-like domain HPY15_13855 PF00196 Bacterial regulatory proteins, luxR family HPY15_13855 PF00563 EAL domain HPY15_13860 PF13419 Haloacid dehalogenase-like hydrolase HPY15_13865 PF00916 Sulfate permease family HPY15_13865 PF01740 STAS domain HPY15_13870 PF00849 RNA pseudouridylate synthase HPY15_13930 PF07724 AAA domain (Cdc48 subfamily) HPY15_13930 PF00004 ATPase family associated with various cellular activities (AAA) HPY15_13930 PF10431 C-terminal, D2-small domain, of ClpB protein HPY15_13930 PF17871 AAA lid domain HPY15_13975 PF05025 RbsD / FucU transport protein family HPY15_13980 PF00005 ABC transporter HPY15_13985 PF02653 Branched-chain amino acid transport system / permease component HPY15_13990 PF13407 Periplasmic binding protein domain HPY15_13995 PF00294 pfkB family carbohydrate kinase HPY15_14000 PF00356 Bacterial regulatory proteins, lacI family HPY15_14005 PF04973 Nicotinamide mononucleotide transporter HPY15_14010 PF01048 Phosphorylase superfamily HPY15_14020 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY15_14025 PF07690 Major Facilitator Superfamily HPY15_14040 PF02743 Cache domain HPY15_14040 PF00512 His Kinase A (phospho-acceptor) domain HPY15_14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_14045 PF02954 Bacterial regulatory protein, Fis family HPY15_14045 PF00072 Response regulator receiver domain HPY15_14045 PF00158 Sigma-54 interaction domain HPY15_14060 PF01266 FAD dependent oxidoreductase HPY15_14065 PF12561 ToxR activated gene A lipoprotein domain HPY15_14065 PF00041 Fibronectin type III domain HPY15_14070 PF01327 Polypeptide deformylase HPY15_14075 PF00175 Oxidoreductase NAD-binding domain HPY15_14075 PF00042 Globin HPY15_14075 PF00970 Oxidoreductase FAD-binding domain HPY15_14080 PF03334 Na+/H+ antiporter subunit HPY15_14085 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HPY15_14105 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HPY15_14105 PF00361 Proton-conducting membrane transporter HPY15_14105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY15_14105 PF13244 Domain of unknown function (DUF4040) HPY15_14115 PF00582 Universal stress protein family HPY15_14120 PF03222 Tryptophan/tyrosine permease family HPY15_14125 PF01212 Beta-eliminating lyase HPY15_14135 PF12843 Putative quorum-sensing-regulated virulence factor HPY15_14145 PF00990 Diguanylate cyclase, GGDEF domain HPY15_14145 PF08448 PAS fold HPY15_14145 PF00563 EAL domain HPY15_14150 PF00313 'Cold-shock' DNA-binding domain HPY15_14165 PF13519 von Willebrand factor type A domain HPY15_14165 PF07584 Aerotolerance regulator N-terminal HPY15_14180 PF01882 Protein of unknown function DUF58 HPY15_14185 PF17863 AAA lid domain HPY15_14185 PF07726 ATPase family associated with various cellular activities (AAA) HPY15_14190 PF02743 Cache domain HPY15_14190 PF00672 HAMP domain HPY15_14190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_14205 PF01773 Na+ dependent nucleoside transporter N-terminus HPY15_14205 PF07662 Na+ dependent nucleoside transporter C-terminus HPY15_14205 PF07670 Nucleoside recognition HPY15_14210 PF01546 Peptidase family M20/M25/M40 HPY15_14210 PF07687 Peptidase dimerisation domain HPY15_14220 PF00158 Sigma-54 interaction domain HPY15_14220 PF01590 GAF domain HPY15_14225 PF00042 Globin HPY15_14225 PF00175 Oxidoreductase NAD-binding domain HPY15_14225 PF00970 Oxidoreductase FAD-binding domain HPY15_14230 PF00313 'Cold-shock' DNA-binding domain HPY15_14235 PF03889 Alternative ribosome-rescue factor A HPY15_14250 PF00072 Response regulator receiver domain HPY15_14260 PF03853 YjeF-related protein N-terminus HPY15_14260 PF01256 Carbohydrate kinase HPY15_14265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY15_14265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY15_14275 PF07885 Ion channel HPY15_14285 PF00478 IMP dehydrogenase / GMP reductase domain HPY15_14295 PF00271 Helicase conserved C-terminal domain HPY15_14295 PF00270 DEAD/DEAH box helicase HPY15_14300 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY15_14305 PF02540 NAD synthase HPY15_14310 PF01467 Cytidylyltransferase-like HPY15_14315 PF11849 Domain of unknown function (DUF3369) HPY15_14320 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_14320 PF00512 His Kinase A (phospho-acceptor) domain HPY15_14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_14330 PF03553 Na+/H+ antiporter family HPY15_14335 PF07690 Major Facilitator Superfamily HPY15_14345 PF00657 GDSL-like Lipase/Acylhydrolase HPY15_14350 PF16458 Beta-prism lectin HPY15_14350 PF07968 Leukocidin/Hemolysin toxin family HPY15_14350 PF12563 Hemolytic toxin N terminal HPY15_14355 PF12729 Four helix bundle sensory module for signal transduction HPY15_14355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_14355 PF00672 HAMP domain HPY15_14360 PF00561 alpha/beta hydrolase fold HPY15_14365 PF03280 Proteobacterial lipase chaperone protein HPY15_14370 PF00801 PKD domain HPY15_14370 PF05547 Immune inhibitor A peptidase M6 HPY15_14390 PF01032 FecCD transport family HPY15_14395 PF01032 FecCD transport family HPY15_14400 PF00005 ABC transporter HPY15_14405 PF12833 Helix-turn-helix domain HPY15_14410 PF00593 TonB dependent receptor HPY15_14410 PF07715 TonB-dependent Receptor Plug Domain HPY15_14420 PF00871 Acetokinase family HPY15_14435 PF00672 HAMP domain HPY15_14435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_14435 PF00512 His Kinase A (phospho-acceptor) domain HPY15_14440 PF00072 Response regulator receiver domain HPY15_14440 PF00486 Transcriptional regulatory protein, C terminal HPY15_14450 PF01261 Xylose isomerase-like TIM barrel HPY15_14455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY15_14465 PF00596 Class II Aldolase and Adducin N-terminal domain HPY15_14470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY15_14475 PF03611 PTS system sugar-specific permease component HPY15_14480 PF00455 DeoR C terminal sensor domain HPY15_14480 PF08220 DeoR-like helix-turn-helix domain HPY15_14505 PF00072 Response regulator receiver domain HPY15_14505 PF00486 Transcriptional regulatory protein, C terminal HPY15_14510 PF00512 His Kinase A (phospho-acceptor) domain HPY15_14510 PF13426 PAS domain HPY15_14510 PF00672 HAMP domain HPY15_14510 PF14827 Double sensory domain of two-component sensor kinase HPY15_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_14550 PF03466 LysR substrate binding domain HPY15_14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_14555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_14555 PF00672 HAMP domain HPY15_14555 PF02743 Cache domain HPY15_14560 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY15_14565 PF07943 Penicillin-binding protein 5, C-terminal domain HPY15_14565 PF00768 D-alanyl-D-alanine carboxypeptidase HPY15_14580 PF00194 Eukaryotic-type carbonic anhydrase HPY15_14585 PF02347 Glycine cleavage system P-protein HPY15_14590 PF01597 Glycine cleavage H-protein HPY15_14595 PF00464 Serine hydroxymethyltransferase HPY15_14605 PF01571 Aminomethyltransferase folate-binding domain HPY15_14605 PF08669 Glycine cleavage T-protein C-terminal barrel domain HPY15_14610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY15_14610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY15_14610 PF03129 Anticodon binding domain HPY15_14610 PF02824 TGS domain HPY15_14615 PF00707 Translation initiation factor IF-3, C-terminal domain HPY15_14615 PF05198 Translation initiation factor IF-3, N-terminal domain HPY15_14620 PF01632 Ribosomal protein L35 HPY15_14625 PF00453 Ribosomal protein L20 HPY15_14630 PF13495 Phage integrase, N-terminal SAM-like domain HPY15_14630 PF00589 Phage integrase family HPY15_14645 PF04229 GrpB protein HPY15_14725 PF00583 Acetyltransferase (GNAT) family HPY15_14805 PF14338 Mrr N-terminal domain HPY15_14805 PF04471 Restriction endonuclease HPY15_14950 PF13737 Transposase DDE domain HPY15_14960 PF06271 RDD family HPY15_14970 PF08378 Nuclease-related domain HPY15_15035 PF13737 Transposase DDE domain HPY15_15080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY15_15080 PF01872 RibD C-terminal domain HPY15_15160 PF02567 Phenazine biosynthesis-like protein HPY15_15165 PF13737 Transposase DDE domain HPY15_15170 PF13302 Acetyltransferase (GNAT) domain HPY15_15225 PF13737 Transposase DDE domain HPY15_15280 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HPY15_15295 PF13419 Haloacid dehalogenase-like hydrolase HPY15_15300 PF13302 Acetyltransferase (GNAT) domain HPY15_15310 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HPY15_15320 PF01381 Helix-turn-helix HPY15_15325 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HPY15_15360 PF13737 Transposase DDE domain HPY15_15365 PF02016 LD-carboxypeptidase N-terminal domain HPY15_15365 PF17676 LD-carboxypeptidase C-terminal domain HPY15_15375 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system HPY15_15380 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA HPY15_15410 PF00583 Acetyltransferase (GNAT) family HPY15_15445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY15_15485 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HPY15_15500 PF00293 NUDIX domain HPY15_15585 PF13737 Transposase DDE domain HPY15_15620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY15_15640 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HPY15_15645 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HPY15_15670 PF13302 Acetyltransferase (GNAT) domain HPY15_15690 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_15735 PF02016 LD-carboxypeptidase N-terminal domain HPY15_15735 PF17676 LD-carboxypeptidase C-terminal domain HPY15_15740 PF13737 Transposase DDE domain HPY15_15765 PF13737 Transposase DDE domain HPY15_15790 PF03477 ATP cone domain HPY15_15790 PF13597 Anaerobic ribonucleoside-triphosphate reductase HPY15_15800 PF00155 Aminotransferase class I and II HPY15_15805 PF08443 RimK-like ATP-grasp domain HPY15_15805 PF18030 RimK PreATP-grasp domain HPY15_15810 PF02378 Phosphotransferase system, EIIC HPY15_15810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY15_15815 PF00294 pfkB family carbohydrate kinase HPY15_15820 PF00381 PTS HPr component phosphorylation site HPY15_15820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY15_15825 PF00356 Bacterial regulatory proteins, lacI family HPY15_15825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY15_15830 PF12320 Type 5 capsule protein repressor C-terminal domain HPY15_15830 PF00149 Calcineurin-like phosphoesterase HPY15_15835 PF13476 AAA domain HPY15_15840 PF00072 Response regulator receiver domain HPY15_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_15845 PF00155 Aminotransferase class I and II HPY15_15855 PF00654 Voltage gated chloride channel HPY15_15860 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPY15_15860 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPY15_15865 PF01926 50S ribosome-binding GTPase HPY15_15870 PF02705 K+ potassium transporter HPY15_15875 PF10371 Domain of unknown function HPY15_15875 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPY15_15875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY15_15875 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPY15_15875 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPY15_15880 PF00512 His Kinase A (phospho-acceptor) domain HPY15_15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_15880 PF13493 Domain of unknown function (DUF4118) HPY15_15880 PF02702 Osmosensitive K+ channel His kinase sensor domain HPY15_15885 PF00072 Response regulator receiver domain HPY15_15885 PF00486 Transcriptional regulatory protein, C terminal HPY15_15890 PF02416 mttA/Hcf106 family HPY15_15895 PF09335 SNARE associated Golgi protein HPY15_15905 PF00563 EAL domain HPY15_15905 PF10388 EAL-domain associated signalling protein domain HPY15_15915 PF01292 Prokaryotic cytochrome b561 HPY15_15920 PF04264 YceI-like domain HPY15_15925 PF01226 Formate/nitrite transporter HPY15_15930 PF03466 LysR substrate binding domain HPY15_15930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_15935 PF06496 Protein of unknown function (DUF1097) HPY15_15940 PF11398 Protein of unknown function (DUF2813) HPY15_15945 PF00149 Calcineurin-like phosphoesterase HPY15_15945 PF02872 5'-nucleotidase, C-terminal domain HPY15_15950 PF03741 Integral membrane protein TerC family HPY15_15960 PF08274 PhnA Zinc-Ribbon HPY15_15960 PF03831 PhnA domain HPY15_15990 PF17151 Periplasmic sensor domain HPY15_15990 PF00990 Diguanylate cyclase, GGDEF domain HPY15_16010 PF05230 MASE2 domain HPY15_16010 PF00990 Diguanylate cyclase, GGDEF domain HPY15_16025 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HPY15_16025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY15_16025 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY15_16030 PF02233 NAD(P) transhydrogenase beta subunit HPY15_16040 PF00072 Response regulator receiver domain HPY15_16040 PF00486 Transcriptional regulatory protein, C terminal HPY15_16055 PF03701 Uncharacterised protein family (UPF0181) HPY15_16065 PF01797 Transposase IS200 like HPY15_16070 PF01253 Translation initiation factor SUI1 HPY15_16080 PF07478 D-ala D-ala ligase C-terminus HPY15_16080 PF01820 D-ala D-ala ligase N-terminus HPY15_16090 PF00583 Acetyltransferase (GNAT) family HPY15_16090 PF13380 CoA binding domain HPY15_16090 PF13607 Succinyl-CoA ligase like flavodoxin domain HPY15_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_16095 PF03466 LysR substrate binding domain HPY15_16100 PF07715 TonB-dependent Receptor Plug Domain HPY15_16100 PF00593 TonB dependent receptor HPY15_16105 PF12793 Sugar transport-related sRNA regulator N-term HPY15_16105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY15_16115 PF03061 Thioesterase superfamily HPY15_16135 PF00043 Glutathione S-transferase, C-terminal domain HPY15_16135 PF02798 Glutathione S-transferase, N-terminal domain HPY15_16150 PF03479 Plants and Prokaryotes Conserved (PCC) domain HPY15_16150 PF12804 MobA-like NTP transferase domain HPY15_16150 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_16155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_16155 PF00005 ABC transporter HPY15_16160 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY15_16160 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_16165 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_16170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY15_16195 PF00854 POT family HPY15_16205 PF00392 Bacterial regulatory proteins, gntR family HPY15_16205 PF07702 UTRA domain HPY15_16210 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_16215 PF00005 ABC transporter HPY15_16225 PF00266 Aminotransferase class-V HPY15_16235 PF13419 Haloacid dehalogenase-like hydrolase HPY15_16240 PF14760 Rnk N-terminus HPY15_16240 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY15_16245 PF13419 Haloacid dehalogenase-like hydrolase HPY15_16260 PF01741 Large-conductance mechanosensitive channel, MscL HPY15_16265 PF01268 Formate--tetrahydrofolate ligase HPY15_16270 PF01625 Peptide methionine sulfoxide reductase HPY15_16270 PF01641 SelR domain HPY15_16275 PF01227 GTP cyclohydrolase I HPY15_16280 PF03454 MoeA C-terminal region (domain IV) HPY15_16280 PF00994 Probable molybdopterin binding domain HPY15_16280 PF03453 MoeA N-terminal region (domain I and II) HPY15_16285 PF00899 ThiF family HPY15_16295 PF00581 Rhodanese-like domain HPY15_16300 PF04198 Putative sugar-binding domain HPY15_16305 PF00923 Transaldolase/Fructose-6-phosphate aldolase HPY15_16310 PF00456 Transketolase, thiamine diphosphate binding domain HPY15_16310 PF02780 Transketolase, C-terminal domain HPY15_16310 PF02779 Transketolase, pyrimidine binding domain HPY15_16335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY15_16335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY15_16350 PF06942 GlpM protein HPY15_16360 PF03466 LysR substrate binding domain HPY15_16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_16365 PF03992 Antibiotic biosynthesis monooxygenase HPY15_16370 PF00881 Nitroreductase family HPY15_16375 PF00873 AcrB/AcrD/AcrF family HPY15_16390 PF04143 Sulphur transport HPY15_16405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY15_16405 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_16450 PF02378 Phosphotransferase system, EIIC HPY15_16450 PF00367 phosphotransferase system, EIIB HPY15_16460 PF00251 Glycosyl hydrolases family 32 N-terminal domain HPY15_16460 PF08244 Glycosyl hydrolases family 32 C terminal HPY15_16465 PF00294 pfkB family carbohydrate kinase HPY15_16470 PF01266 FAD dependent oxidoreductase HPY15_16470 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HPY15_16475 PF00672 HAMP domain HPY15_16475 PF17200 Single Cache domain 2 HPY15_16475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_16480 PF00691 OmpA family HPY15_16480 PF13488 Glycine zipper HPY15_16485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY15_16485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY15_16490 PF13419 Haloacid dehalogenase-like hydrolase HPY15_16495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_16495 PF12729 Four helix bundle sensory module for signal transduction HPY15_16495 PF00672 HAMP domain HPY15_16500 PF03606 C4-dicarboxylate anaerobic carrier HPY15_16505 PF03315 Serine dehydratase beta chain HPY15_16505 PF03313 Serine dehydratase alpha chain HPY15_16510 PF00196 Bacterial regulatory proteins, luxR family HPY15_16510 PF00072 Response regulator receiver domain HPY15_16515 PF07730 Histidine kinase HPY15_16515 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HPY15_16515 PF00672 HAMP domain HPY15_16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_16520 PF00037 4Fe-4S binding domain HPY15_16520 PF12800 4Fe-4S binding domain HPY15_16520 PF13187 4Fe-4S dicluster domain HPY15_16530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY15_16530 PF00384 Molybdopterin oxidoreductase HPY15_16530 PF01568 Molydopterin dinucleotide binding domain HPY15_16535 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HPY15_16540 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY15_16550 PF01966 HD domain HPY15_16555 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HPY15_16565 PF00108 Thiolase, N-terminal domain HPY15_16565 PF02803 Thiolase, C-terminal domain HPY15_16570 PF00106 short chain dehydrogenase HPY15_16575 PF07549 SecD/SecF GG Motif HPY15_16575 PF02355 Protein export membrane protein HPY15_16580 PF02355 Protein export membrane protein HPY15_16580 PF13721 SecD export protein N-terminal TM region HPY15_16580 PF07549 SecD/SecF GG Motif HPY15_16595 PF00990 Diguanylate cyclase, GGDEF domain HPY15_16595 PF17158 Membrane-associated sensor, integral membrane domain HPY15_16600 PF00483 Nucleotidyl transferase HPY15_16605 PF00704 Glycosyl hydrolases family 18 HPY15_16605 PF06483 Chitinase C HPY15_16610 PF00465 Iron-containing alcohol dehydrogenase HPY15_16620 PF02954 Bacterial regulatory protein, Fis family HPY15_16620 PF00072 Response regulator receiver domain HPY15_16620 PF14532 Sigma-54 interaction domain HPY15_16625 PF00512 His Kinase A (phospho-acceptor) domain HPY15_16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_16625 PF02743 Cache domain HPY15_16635 PF07690 Major Facilitator Superfamily HPY15_16640 PF00224 Pyruvate kinase, barrel domain HPY15_16640 PF02887 Pyruvate kinase, alpha/beta domain HPY15_16645 PF00512 His Kinase A (phospho-acceptor) domain HPY15_16645 PF01627 Hpt domain HPY15_16645 PF00672 HAMP domain HPY15_16645 PF00072 Response regulator receiver domain HPY15_16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_16650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY15_16655 PF02142 MGS-like domain HPY15_16660 PF00857 Isochorismatase family HPY15_16665 PF01219 Prokaryotic diacylglycerol kinase HPY15_16680 PF12462 DNA helicase IV / RNA helicase N terminal HPY15_16680 PF00580 UvrD/REP helicase N-terminal domain HPY15_16680 PF13361 UvrD-like helicase C-terminal domain HPY15_16685 PF12805 FUSC-like inner membrane protein yccS HPY15_16690 PF08448 PAS fold HPY15_16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_16690 PF00072 Response regulator receiver domain HPY15_16690 PF13188 PAS domain HPY15_16690 PF00512 His Kinase A (phospho-acceptor) domain HPY15_16715 PF03459 TOBE domain HPY15_16715 PF00005 ABC transporter HPY15_16720 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_16730 PF07685 CobB/CobQ-like glutamine amidotransferase domain HPY15_16730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY15_16735 PF14706 Transposase DNA-binding HPY15_16735 PF01609 Transposase DDE domain HPY15_16735 PF02281 Transposase Tn5 dimerisation domain HPY15_16775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_16775 PF00072 Response regulator receiver domain HPY15_16775 PF00512 His Kinase A (phospho-acceptor) domain HPY15_16775 PF09308 LuxQ, periplasmic HPY15_16780 PF13407 Periplasmic binding protein domain HPY15_16790 PF01541 GIY-YIG catalytic domain HPY15_16795 PF04337 Protein of unknown function, DUF480 HPY15_16805 PF04363 Protein of unknown function (DUF496) HPY15_16815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPY15_16815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HPY15_16820 PF00230 Major intrinsic protein HPY15_16825 PF01266 FAD dependent oxidoreductase HPY15_16825 PF04324 BFD-like [2Fe-2S] binding domain HPY15_16830 PF00890 FAD binding domain HPY15_16835 PF02754 Cysteine-rich domain HPY15_16835 PF13183 4Fe-4S dicluster domain HPY15_16840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY15_16840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY15_16845 PF00085 Thioredoxin HPY15_16850 PF07690 Major Facilitator Superfamily HPY15_16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_16875 PF03466 LysR substrate binding domain HPY15_16880 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_16885 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_16890 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_16895 PF00005 ABC transporter HPY15_16905 PF05762 VWA domain containing CoxE-like protein HPY15_16910 PF17868 AAA lid domain HPY15_16910 PF12592 Protein of unknown function (DUF3763) HPY15_16910 PF07728 AAA domain (dynein-related subfamily) HPY15_16915 PF00293 NUDIX domain HPY15_16925 PF00034 Cytochrome c HPY15_16930 PF00440 Bacterial regulatory proteins, tetR family HPY15_16930 PF08361 MAATS-type transcriptional repressor, C-terminal region HPY15_16935 PF00271 Helicase conserved C-terminal domain HPY15_16935 PF00270 DEAD/DEAH box helicase HPY15_16940 PF04336 Acyl carrier protein phosphodiesterase HPY15_16945 PF03222 Tryptophan/tyrosine permease family HPY15_16950 PF00672 HAMP domain HPY15_16950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_16955 PF16363 GDP-mannose 4,6 dehydratase HPY15_16960 PF03746 LamB/YcsF family HPY15_16970 PF02626 Carboxyltransferase domain, subdomain A and B HPY15_16980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY15_16980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY15_16990 PF00005 ABC transporter HPY15_16995 PF13472 GDSL-like Lipase/Acylhydrolase family HPY15_17000 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY15_17000 PF07055 Enoyl reductase FAD binding domain HPY15_17000 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY15_17005 PF00990 Diguanylate cyclase, GGDEF domain HPY15_17005 PF00563 EAL domain HPY15_17005 PF00498 FHA domain HPY15_17015 PF00684 DnaJ central domain HPY15_17015 PF01556 DnaJ C terminal domain HPY15_17015 PF00226 DnaJ domain HPY15_17030 PF13419 Haloacid dehalogenase-like hydrolase HPY15_17045 PF00294 pfkB family carbohydrate kinase HPY15_17050 PF00884 Sulfatase HPY15_17060 PF03880 DbpA RNA binding domain HPY15_17060 PF00270 DEAD/DEAH box helicase HPY15_17060 PF00271 Helicase conserved C-terminal domain HPY15_17065 PF08206 Ribonuclease B OB domain HPY15_17065 PF00575 S1 RNA binding domain HPY15_17065 PF00773 RNB domain HPY15_17075 PF12849 PBP superfamily domain HPY15_17080 PF01575 MaoC like domain HPY15_17085 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HPY15_17090 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HPY15_17090 PF18416 N-acetylglucosamine binding protein domain 2 HPY15_17095 PF04151 Bacterial pre-peptidase C-terminal domain HPY15_17095 PF01447 Thermolysin metallopeptidase, catalytic domain HPY15_17095 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY15_17095 PF03413 Peptidase propeptide and YPEB domain HPY15_17095 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY15_17100 PF04389 Peptidase family M28 HPY15_17100 PF04151 Bacterial pre-peptidase C-terminal domain HPY15_17105 PF00491 Arginase family HPY15_17110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY15_17110 PF17810 Arginine decarboxylase helical bundle domain HPY15_17110 PF17944 Arginine decarboxylase C-terminal helical extension HPY15_17120 PF01769 Divalent cation transporter HPY15_17120 PF03448 MgtE intracellular N domain HPY15_17120 PF00571 CBS domain HPY15_17125 PF00166 Chaperonin 10 Kd subunit HPY15_17130 PF00118 TCP-1/cpn60 chaperonin family HPY15_17140 PF00696 Amino acid kinase family HPY15_17140 PF13840 ACT domain HPY15_17145 PF06339 Ectoine synthase HPY15_17150 PF00202 Aminotransferase class-III HPY15_17155 PF00583 Acetyltransferase (GNAT) family HPY15_17160 PF01329 Pterin 4 alpha carbinolamine dehydratase HPY15_17165 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HPY15_17170 PF00501 AMP-binding enzyme HPY15_17170 PF13193 AMP-binding enzyme C-terminal domain HPY15_17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_17190 PF03466 LysR substrate binding domain HPY15_17200 PF00892 EamA-like transporter family HPY15_17205 PF14602 Hexapeptide repeat of succinyl-transferase HPY15_17205 PF00132 Bacterial transferase hexapeptide (six repeats) HPY15_17205 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HPY15_17210 PF03471 Transporter associated domain HPY15_17210 PF00571 CBS domain HPY15_17210 PF01595 Cyclin M transmembrane N-terminal domain HPY15_17215 PF02566 OsmC-like protein HPY15_17220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY15_17225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY15_17225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY15_17245 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY15_17250 PF13520 Amino acid permease HPY15_17255 PF00990 Diguanylate cyclase, GGDEF domain HPY15_17265 PF04397 LytTr DNA-binding domain HPY15_17265 PF00072 Response regulator receiver domain HPY15_17270 PF13492 GAF domain HPY15_17270 PF07694 5TMR of 5TMR-LYT HPY15_17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_17270 PF06580 Histidine kinase HPY15_17285 PF12704 MacB-like periplasmic core domain HPY15_17285 PF02687 FtsX-like permease family HPY15_17285 PF00005 ABC transporter HPY15_17290 PF00005 ABC transporter HPY15_17300 PF00248 Aldo/keto reductase family HPY15_17305 PF00128 Alpha amylase, catalytic domain HPY15_17315 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY15_17320 PF12262 Bacterial virulence factor lipase N-terminal HPY15_17325 PF08447 PAS fold HPY15_17325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_17325 PF13426 PAS domain HPY15_17330 PF03413 Peptidase propeptide and YPEB domain HPY15_17330 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY15_17330 PF04151 Bacterial pre-peptidase C-terminal domain HPY15_17330 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY15_17330 PF01447 Thermolysin metallopeptidase, catalytic domain HPY15_17340 PF03922 OmpW family HPY15_17350 PF00768 D-alanyl-D-alanine carboxypeptidase HPY15_17355 PF00773 RNB domain HPY15_17355 PF17876 Cold shock domain HPY15_17355 PF00575 S1 RNA binding domain HPY15_17355 PF08206 Ribonuclease B OB domain HPY15_17355 PF08461 Ribonuclease R winged-helix domain HPY15_17360 PF00313 'Cold-shock' DNA-binding domain HPY15_17370 PF00291 Pyridoxal-phosphate dependent enzyme HPY15_17420 PF00107 Zinc-binding dehydrogenase HPY15_17420 PF08240 Alcohol dehydrogenase GroES-like domain HPY15_17425 PF00155 Aminotransferase class I and II HPY15_17430 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY15_17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_17435 PF03466 LysR substrate binding domain HPY15_17440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY15_17465 PF01966 HD domain HPY15_17470 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HPY15_17470 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HPY15_17475 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY15_17480 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HPY15_17480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY15_17505 PF02595 Glycerate kinase family HPY15_17510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_17510 PF00672 HAMP domain HPY15_17515 PF01243 Pyridoxamine 5'-phosphate oxidase HPY15_17520 PF06228 Haem utilisation ChuX/HutX HPY15_17525 PF04055 Radical SAM superfamily HPY15_17530 PF03544 Gram-negative bacterial TonB protein C-terminal HPY15_17535 PF01618 MotA/TolQ/ExbB proton channel family HPY15_17540 PF02472 Biopolymer transport protein ExbD/TolR HPY15_17545 PF01497 Periplasmic binding protein HPY15_17550 PF01032 FecCD transport family HPY15_17555 PF00005 ABC transporter HPY15_17585 PF00672 HAMP domain HPY15_17585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_17585 PF02743 Cache domain HPY15_17590 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY15_17590 PF03476 MOSC N-terminal beta barrel domain HPY15_17590 PF03473 MOSC domain HPY15_17590 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY15_17590 PF03476 MOSC N-terminal beta barrel domain HPY15_17590 PF03473 MOSC domain HPY15_17595 PF01979 Amidohydrolase family HPY15_17600 PF05958 tRNA (Uracil-5-)-methyltransferase HPY15_17605 PF05661 Protein of unknown function (DUF808) HPY15_17610 PF00990 Diguanylate cyclase, GGDEF domain HPY15_17610 PF17151 Periplasmic sensor domain HPY15_17620 PF00313 'Cold-shock' DNA-binding domain HPY15_17645 PF08448 PAS fold HPY15_17645 PF00990 Diguanylate cyclase, GGDEF domain HPY15_17650 PF00455 DeoR C terminal sensor domain HPY15_17650 PF08220 DeoR-like helix-turn-helix domain HPY15_17665 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_17670 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_17670 PF14785 Maltose transport system permease protein MalF P2 domain HPY15_17675 PF01547 Bacterial extracellular solute-binding protein HPY15_17680 PF08402 TOBE domain HPY15_17680 PF00005 ABC transporter HPY15_17685 PF13302 Acetyltransferase (GNAT) domain HPY15_17700 PF01906 Putative heavy-metal-binding HPY15_17705 PF00196 Bacterial regulatory proteins, luxR family HPY15_17715 PF00072 Response regulator receiver domain HPY15_17715 PF01584 CheW-like domain HPY15_17720 PF01047 MarR family HPY15_17725 PF00990 Diguanylate cyclase, GGDEF domain HPY15_17740 PF03707 Bacterial signalling protein N terminal repeat HPY15_17740 PF00990 Diguanylate cyclase, GGDEF domain HPY15_17740 PF00563 EAL domain HPY15_17760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_17760 PF03466 LysR substrate binding domain HPY15_17765 PF00563 EAL domain HPY15_17765 PF00990 Diguanylate cyclase, GGDEF domain HPY15_17775 PF02678 Pirin HPY15_17775 PF05726 Pirin C-terminal cupin domain HPY15_17780 PF06865 Pyrimidine/purine nucleoside phosphorylase HPY15_17790 PF07690 Major Facilitator Superfamily HPY15_17795 PF00672 HAMP domain HPY15_17795 PF12729 Four helix bundle sensory module for signal transduction HPY15_17795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_17800 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY15_17800 PF13654 AAA domain HPY15_17810 PF00005 ABC transporter HPY15_17810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_17815 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_17820 PF02743 Cache domain HPY15_17820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_17820 PF00672 HAMP domain HPY15_17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_17830 PF03466 LysR substrate binding domain HPY15_17840 PF02652 L-lactate permease HPY15_17845 PF01070 FMN-dependent dehydrogenase HPY15_17855 PF03618 Kinase/pyrophosphorylase HPY15_17860 PF00391 PEP-utilising enzyme, mobile domain HPY15_17860 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPY15_17860 PF02896 PEP-utilising enzyme, TIM barrel domain HPY15_17865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_17865 PF08447 PAS fold HPY15_17870 PF01554 MatE HPY15_17880 PF01797 Transposase IS200 like HPY15_17885 PF00271 Helicase conserved C-terminal domain HPY15_17885 PF00270 DEAD/DEAH box helicase HPY15_17890 PF03466 LysR substrate binding domain HPY15_17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_17900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY15_17910 PF00005 ABC transporter HPY15_17910 PF00664 ABC transporter transmembrane region HPY15_17920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY15_17930 PF01810 LysE type translocator HPY15_17935 PF12833 Helix-turn-helix domain HPY15_17950 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY15_17955 PF01047 MarR family HPY15_17960 PF02566 OsmC-like protein HPY15_17965 PF13609 Gram-negative porin HPY15_17970 PF00892 EamA-like transporter family HPY15_17975 PF00462 Glutaredoxin HPY15_17980 PF07670 Nucleoside recognition HPY15_17985 PF07670 Nucleoside recognition HPY15_17990 PF03600 Citrate transporter HPY15_18000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPY15_18000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY15_18005 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY15_18005 PF06029 AlkA N-terminal domain HPY15_18010 PF07681 DoxX HPY15_18015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_18015 PF03466 LysR substrate binding domain HPY15_18035 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY15_18045 PF07148 Maltose operon periplasmic protein precursor (MalM) HPY15_18050 PF02264 LamB porin HPY15_18055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY15_18055 PF00128 Alpha amylase, catalytic domain HPY15_18065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_18065 PF00672 HAMP domain HPY15_18065 PF12729 Four helix bundle sensory module for signal transduction HPY15_18080 PF00672 HAMP domain HPY15_18080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_18090 PF00793 DAHP synthetase I family HPY15_18095 PF00005 ABC transporter HPY15_18100 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_18105 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY15_18110 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_18125 PF01232 Mannitol dehydrogenase Rossmann domain HPY15_18125 PF08125 Mannitol dehydrogenase C-terminal domain HPY15_18130 PF05068 Mannitol repressor HPY15_18135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY15_18160 PF00892 EamA-like transporter family HPY15_18175 PF13460 NAD(P)H-binding HPY15_18180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_18180 PF03466 LysR substrate binding domain HPY15_18185 PF00672 HAMP domain HPY15_18185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_18185 PF02743 Cache domain HPY15_18190 PF00106 short chain dehydrogenase HPY15_18195 PF03466 LysR substrate binding domain HPY15_18195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY15_18200 PF04013 Putative SAM-dependent RNA methyltransferase HPY15_18205 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY15_18215 PF13520 Amino acid permease HPY15_18230 PF00171 Aldehyde dehydrogenase family HPY15_18235 PF01037 Lrp/AsnC ligand binding domain HPY15_18240 PF02743 Cache domain HPY15_18240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_18240 PF00672 HAMP domain HPY15_18250 PF00474 Sodium:solute symporter family HPY15_18260 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HPY15_18260 PF01619 Proline dehydrogenase HPY15_18260 PF00171 Aldehyde dehydrogenase family HPY15_18260 PF14850 DNA-binding domain of Proline dehydrogenase HPY15_18265 PF12833 Helix-turn-helix domain HPY15_18275 PF03781 Sulfatase-modifying factor enzyme 1 HPY15_18280 PF00072 Response regulator receiver domain HPY15_18280 PF00196 Bacterial regulatory proteins, luxR family HPY15_18285 PF01243 Pyridoxamine 5'-phosphate oxidase HPY15_18285 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HPY15_18290 PF00529 HlyD membrane-fusion protein of T1SS HPY15_18305 PF03412 Peptidase C39 family HPY15_18305 PF00664 ABC transporter transmembrane region HPY15_18305 PF00005 ABC transporter HPY15_18315 PF00486 Transcriptional regulatory protein, C terminal HPY15_18315 PF00072 Response regulator receiver domain HPY15_18325 PF02743 Cache domain HPY15_18325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_18325 PF00672 HAMP domain HPY15_18330 PF00072 Response regulator receiver domain HPY15_18330 PF01339 CheB methylesterase HPY15_18335 PF03975 CheD chemotactic sensory transduction HPY15_18340 PF01739 CheR methyltransferase, SAM binding domain HPY15_18340 PF03705 CheR methyltransferase, all-alpha domain HPY15_18345 PF02203 Tar ligand binding domain homologue HPY15_18345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY15_18345 PF00672 HAMP domain HPY15_18350 PF01584 CheW-like domain HPY15_18355 PF01584 CheW-like domain HPY15_18360 PF09078 CheY binding HPY15_18360 PF01627 Hpt domain HPY15_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_18360 PF02895 Signal transducing histidine kinase, homodimeric domain HPY15_18360 PF01584 CheW-like domain HPY15_18365 PF00072 Response regulator receiver domain HPY15_18380 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_18385 PF00528 Binding-protein-dependent transport system inner membrane component HPY15_18385 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY15_18390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY15_18390 PF00005 ABC transporter HPY15_18395 PF00884 Sulfatase HPY15_18395 PF08019 Phosphoethanolamine transferase EptA/EptB HPY15_18400 PF08521 Two-component sensor kinase N-terminal HPY15_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY15_18400 PF00512 His Kinase A (phospho-acceptor) domain HPY15_18405 PF00486 Transcriptional regulatory protein, C terminal HPY15_18405 PF00072 Response regulator receiver domain HPY15_18415 PF00106 short chain dehydrogenase HPY15_18425 PF00501 AMP-binding enzyme HPY15_18435 PF05127 Helicase HPY15_18435 PF13718 GNAT acetyltransferase 2 HPY15_18440 PF13416 Bacterial extracellular solute-binding protein