Sa5Y_VC00001	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00001	SM00760	Bacterial dnaA protein helix-turn-helix domain
Sa5Y_VC00003	SM00480	DNA polymerase III beta subunit
Sa5Y_VC00005	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00005	SM00433	TopoisomeraseII
Sa5Y_VC00024	SM00829	Enoylreductase
Sa5Y_VC00030	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00031	SM00563	Phosphate acyltransferases
Sa5Y_VC00044	SM00257	Lysin motif
Sa5Y_VC00049	SM01001	AIR carboxylase
Sa5Y_VC00067	SM00876	Biotin and Thiamin Synthesis associated domain
Sa5Y_VC00072	SM00344	helix_turn_helix ASNC type
Sa5Y_VC00073	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC00073	SM00091	PAS domain
Sa5Y_VC00073	SM00267	diguanylate cyclase
Sa5Y_VC00093	SM00563	Phosphate acyltransferases
Sa5Y_VC00097	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Sa5Y_VC00097	SM00091	PAS domain
Sa5Y_VC00097	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC00099	SM00450	Rhodanese Homology Domain
Sa5Y_VC00101	SM01004	Delta-aminolevulinic acid dehydratase
Sa5Y_VC00104	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Sa5Y_VC00104	SM00474	3'-5' exonuclease
Sa5Y_VC00104	SM00475	5'-3' exonuclease
Sa5Y_VC00104	SM00482	DNA polymerase A domain
Sa5Y_VC00111	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC00117	SM01219	Sa5Y_VC00117
Sa5Y_VC00123	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC00123	SM00267	diguanylate cyclase
Sa5Y_VC00123	SM00897	FIST N domain
Sa5Y_VC00123	SM01204	Sa5Y_VC00123
Sa5Y_VC00124	SM01144	Sa5Y_VC00124
Sa5Y_VC00136	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00136	SM00962	SRP54-type protein, GTPase domain
Sa5Y_VC00136	SM00963	SRP54-type protein, helical bundle domain
Sa5Y_VC00137	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00148	SM00360	RNA recognition motif
Sa5Y_VC00159	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC00159	SM00267	diguanylate cyclase
Sa5Y_VC00159	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC00160	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00160	SM00448	cheY-homologous receiver domain
Sa5Y_VC00161	SM00091	PAS domain
Sa5Y_VC00161	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00161	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC00163	SM01230	Sa5Y_VC00163
Sa5Y_VC00173	SM00363	S4 RNA-binding domain
Sa5Y_VC00176	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00192	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC00192	SM00732	Likely ribonuclease with RNase H fold.
Sa5Y_VC00194	SM00448	cheY-homologous receiver domain
Sa5Y_VC00194	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC00195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC00195	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00195	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC00197	SM00487	DEAD-like helicases superfamily
Sa5Y_VC00197	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC00199	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VC00199	SM00954	Region found in RelA / SpoT proteins
Sa5Y_VC00200	SM01409	Sa5Y_VC00200
Sa5Y_VC00201	SM00072	Guanylate kinase homologues.
Sa5Y_VC00205	SM01091	Transporter associated domain
Sa5Y_VC00206	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VC00206	SM00448	cheY-homologous receiver domain
Sa5Y_VC00211	SM00267	diguanylate cyclase
Sa5Y_VC00215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC00215	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00215	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC00216	SM00448	cheY-homologous receiver domain
Sa5Y_VC00216	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC00226	SM00919	Malic enzyme, NAD binding domain
Sa5Y_VC00226	SM01274	Sa5Y_VC00226
Sa5Y_VC00228	SM00487	DEAD-like helicases superfamily
Sa5Y_VC00228	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC00229	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VC00232	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00232	SM01086	C-terminal, D2-small domain, of ClpB protein
Sa5Y_VC00241	SM00883	Chaperonin 10 Kd subunit
Sa5Y_VC00244	SM00507	HNH nucleases
Sa5Y_VC00250	SM00841	Elongation factor P, C-terminal
Sa5Y_VC00250	SM01185	Sa5Y_VC00250
Sa5Y_VC00256	SM00450	Rhodanese Homology Domain
Sa5Y_VC00259	SM00971	Serine acetyltransferase, N-terminal
Sa5Y_VC00263	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Sa5Y_VC00276	SM00965	Secretin and TonB N terminus short domain
Sa5Y_VC00286	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC00291	SM01150	Sa5Y_VC00291
Sa5Y_VC00292	SM00100	Cyclic nucleotide-monophosphate binding domain
Sa5Y_VC00292	SM00419	helix_turn_helix, cAMP Regulatory protein
Sa5Y_VC00297	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00303	SM00788	Adenylosuccinate synthetase
Sa5Y_VC00304	SM00671	Sel1-like repeats.
Sa5Y_VC00306	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC00306	SM00357	Cold shock protein domain
Sa5Y_VC00306	SM00955	Sa5Y_VC00306
Sa5Y_VC00307	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Sa5Y_VC00308	SM01403	Sa5Y_VC00308
Sa5Y_VC00312	SM01382	Sa5Y_VC00312
Sa5Y_VC00312	SM01383	Sa5Y_VC00312
Sa5Y_VC00315	SM00322	K homology RNA-binding domain
Sa5Y_VC00319	SM01374	Sa5Y_VC00319
Sa5Y_VC00320	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Sa5Y_VC00334	SM00363	S4 RNA-binding domain
Sa5Y_VC00334	SM01390	Sa5Y_VC00334
Sa5Y_VC00335	SM00662	RNA polymerases D
Sa5Y_VC00342	SM00487	DEAD-like helicases superfamily
Sa5Y_VC00342	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC00352	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00366	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00369	SM00924	MgtE intracellular N domain
Sa5Y_VC00375	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00379	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VC00381	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00388	SM00563	Phosphate acyltransferases
Sa5Y_VC00393	SM00670	Large family of predicted nucleotide-binding domains
Sa5Y_VC00394	SM00487	DEAD-like helicases superfamily
Sa5Y_VC00394	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC00404	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VC00414	SM01329	Sa5Y_VC00414
Sa5Y_VC00415	SM00917	LeuA allosteric (dimerisation) domain
Sa5Y_VC00417	SM00014	Acid phosphatase homologues
Sa5Y_VC00423	SM01321	Sa5Y_VC00423
Sa5Y_VC00443	SM00358	Double-stranded RNA binding motif
Sa5Y_VC00443	SM00535	Ribonuclease III family
Sa5Y_VC00450	SM00267	diguanylate cyclase
Sa5Y_VC00451	SM00073	Histidine Phosphotransfer domain
Sa5Y_VC00451	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC00451	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00451	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC00451	SM00448	cheY-homologous receiver domain
Sa5Y_VC00453	SM00954	Region found in RelA / SpoT proteins
Sa5Y_VC00456	SM01192	Sa5Y_VC00456
Sa5Y_VC00456	SM01193	Sa5Y_VC00456
Sa5Y_VC00458	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00461	SM00287	Bacterial SH3 domain homologues
Sa5Y_VC00464	SM00880	Sa5Y_VC00464
Sa5Y_VC00464	SM01118	Sa5Y_VC00464
Sa5Y_VC00467	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC00467	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC00475	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00475	SM00433	TopoisomeraseII
Sa5Y_VC00476	SM00434	DNA Topoisomerase IV
Sa5Y_VC00485	SM00644	Sa5Y_VC00485
Sa5Y_VC00490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Sa5Y_VC00490	SM00895	Sa5Y_VC00490
Sa5Y_VC00508	SM00842	Cell division protein FtsA
Sa5Y_VC00509	SM00864	Tubulin/FtsZ family, GTPase domain
Sa5Y_VC00509	SM00865	Tubulin/FtsZ family, C-terminal domain
Sa5Y_VC00512	SM00957	SecA DEAD-like domain
Sa5Y_VC00512	SM00958	SecA preprotein cross-linking domain
Sa5Y_VC00515	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
Sa5Y_VC00516	SM00851	MGS-like domain
Sa5Y_VC00516	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Sa5Y_VC00531	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC00532	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Sa5Y_VC00532	SM00091	PAS domain
Sa5Y_VC00532	SM00267	diguanylate cyclase
Sa5Y_VC00533	SM00073	Histidine Phosphotransfer domain
Sa5Y_VC00533	SM00091	PAS domain
Sa5Y_VC00533	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00533	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC00533	SM00448	cheY-homologous receiver domain
Sa5Y_VC00534	SM00448	cheY-homologous receiver domain
Sa5Y_VC00534	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC00543	SM00518	AP endonuclease family 2
Sa5Y_VC00544	SM00986	Uracil DNA glycosylase superfamily
Sa5Y_VC00544	SM00987	UreE urease accessory protein, C-terminal domain 
Sa5Y_VC00552	SM01133	Sa5Y_VC00552
Sa5Y_VC00553	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
Sa5Y_VC00559	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00560	SM00838	Elongation factor G C-terminus
Sa5Y_VC00560	SM00889	Elongation factor G, domain IV
Sa5Y_VC00564	SM01038	Beta galactosidase small chain
Sa5Y_VC00565	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VC00584	SM00925	MltA specific insert domain
Sa5Y_VC00591	SM00464	Found in ATP-dependent protease La (LON)
Sa5Y_VC00601	SM00900	Sa5Y_VC00601
Sa5Y_VC00609	SM00267	diguanylate cyclase
Sa5Y_VC00619	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Sa5Y_VC00630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VC00640	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Sa5Y_VC00642	SM00935	Outer membrane protein (OmpH-like)
Sa5Y_VC00648	SM00481	DNA polymerase alpha chain like domain
Sa5Y_VC00650	SM00977	TilS substrate C-terminal domain
Sa5Y_VC00653	SM00938	Nitrogen regulatory protein P-II
Sa5Y_VC00655	SM00257	Lysin motif
Sa5Y_VC00656	SM00849	Metallo-beta-lactamase superfamily
Sa5Y_VC00659	SM00479	Sa5Y_VC00659
Sa5Y_VC00667	SM00267	diguanylate cyclase
Sa5Y_VC00668	SM00363	S4 RNA-binding domain
Sa5Y_VC00669	SM00463	Small MutS-related domain
Sa5Y_VC00673	SM01081	Putative carbohydrate binding domain
Sa5Y_VC00681	SM00823	Phosphopantetheine attachment site
Sa5Y_VC00687	SM00858	Sa5Y_VC00687
Sa5Y_VC00688	SM00260	Two component signalling adaptor domain
Sa5Y_VC00688	SM00448	cheY-homologous receiver domain
Sa5Y_VC00689	SM00138	Methyltransferase, chemotaxis proteins 
Sa5Y_VC00698	SM00047	Lysozyme subfamily 2
Sa5Y_VC00721	SM01400	Sa5Y_VC00721
Sa5Y_VC00725	SM00937	Sa5Y_VC00725
Sa5Y_VC00737	SM00028	Tetratricopeptide repeats
Sa5Y_VC00740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC00740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC00743	SM01130	Sa5Y_VC00743
Sa5Y_VC00760	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00761	SM00091	PAS domain
Sa5Y_VC00761	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00761	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC00762	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00762	SM00448	cheY-homologous receiver domain
Sa5Y_VC00767	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00778	SM00463	Small MutS-related domain
Sa5Y_VC00786	SM00825	Beta-ketoacyl synthase
Sa5Y_VC00788	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Sa5Y_VC00806	SM00861	Transketolase, pyrimidine binding domain
Sa5Y_VC00809	SM00881	CoA binding domain
Sa5Y_VC00811	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00813	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VC00815	SM00899	Sa5Y_VC00815
Sa5Y_VC00819	SM00836	DALR anticodon binding domain
Sa5Y_VC00819	SM01016	Arginyl tRNA synthetase N terminal dom
Sa5Y_VC00822	SM00855	Phosphoglycerate mutase family
Sa5Y_VC00824	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00824	SM00962	SRP54-type protein, GTPase domain
Sa5Y_VC00827	SM00448	cheY-homologous receiver domain
Sa5Y_VC00829	SM00073	Histidine Phosphotransfer domain
Sa5Y_VC00829	SM00260	Two component signalling adaptor domain
Sa5Y_VC00829	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00829	SM01231	Sa5Y_VC00829
Sa5Y_VC00830	SM00448	cheY-homologous receiver domain
Sa5Y_VC00832	SM00260	Two component signalling adaptor domain
Sa5Y_VC00833	SM00260	Two component signalling adaptor domain
Sa5Y_VC00835	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00849	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Sa5Y_VC00849	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Sa5Y_VC00849	SM00493	Sa5Y_VC00849
Sa5Y_VC00856	SM00073	Histidine Phosphotransfer domain
Sa5Y_VC00858	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Sa5Y_VC00863	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC00864	SM00363	S4 RNA-binding domain
Sa5Y_VC00870	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Sa5Y_VC00871	SM00822	Sa5Y_VC00871
Sa5Y_VC00873	SM00825	Beta-ketoacyl synthase
Sa5Y_VC00887	SM00260	Two component signalling adaptor domain
Sa5Y_VC00887	SM00448	cheY-homologous receiver domain
Sa5Y_VC00893	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Sa5Y_VC00897	SM00870	Sa5Y_VC00897
Sa5Y_VC00902	SM00487	DEAD-like helicases superfamily
Sa5Y_VC00902	SM00491	Sa5Y_VC00902
Sa5Y_VC00908	SM00474	3'-5' exonuclease
Sa5Y_VC00910	SM01144	Sa5Y_VC00910
Sa5Y_VC00911	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VC00912	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VC00918	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
Sa5Y_VC00921	SM00563	Phosphate acyltransferases
Sa5Y_VC00924	SM00978	Sa5Y_VC00924
Sa5Y_VC00934	SM00495	Chitin-binding domain type 3
Sa5Y_VC00934	SM00636	Sa5Y_VC00934
Sa5Y_VC00948	SM00563	Phosphate acyltransferases
Sa5Y_VC00951	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC00951	SM00267	diguanylate cyclase
Sa5Y_VC00958	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00958	SM00448	cheY-homologous receiver domain
Sa5Y_VC00959	SM00387	Histidine kinase-like ATPases
Sa5Y_VC00959	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC00962	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00962	SM00994	ClpX C4-type zinc finger
Sa5Y_VC00962	SM01086	C-terminal, D2-small domain, of ClpB protein
Sa5Y_VC00963	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00963	SM00464	Found in ATP-dependent protease La (LON)
Sa5Y_VC00964	SM00411	bacterial (prokaryotic) histone like domain
Sa5Y_VC00967	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Sa5Y_VC00969	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC00970	SM00411	bacterial (prokaryotic) histone like domain
Sa5Y_VC00972	SM00028	Tetratricopeptide repeats
Sa5Y_VC00973	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Sa5Y_VC00977	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00978	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC00985	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Sa5Y_VC00985	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Sa5Y_VC00986	SM00344	helix_turn_helix ASNC type
Sa5Y_VC00987	SM00843	Sa5Y_VC00987
Sa5Y_VC00990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Sa5Y_VC00992	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC00992	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01003	SM00487	DEAD-like helicases superfamily
Sa5Y_VC01003	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC01003	SM00982	Sa5Y_VC01003
Sa5Y_VC01003	SM01058	CarD-like/TRCF domain
Sa5Y_VC01006	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01009	SM00849	Metallo-beta-lactamase superfamily
Sa5Y_VC01010	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01016	SM00763	PrkA AAA domain
Sa5Y_VC01020	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01025	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01026	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VC01026	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Sa5Y_VC01030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01034	SM00491	Sa5Y_VC01034
Sa5Y_VC01038	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC01041	SM00840	Sa5Y_VC01041
Sa5Y_VC01043	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Sa5Y_VC01044	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01058	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01058	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC01058	SM00448	cheY-homologous receiver domain
Sa5Y_VC01061	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01076	SM01130	Sa5Y_VC01076
Sa5Y_VC01081	SM00635	Bacterial Ig-like domain 2
Sa5Y_VC01089	SM01276	Sa5Y_VC01089
Sa5Y_VC01095	SM00246	Wiskott Aldrich syndrome homology region 2
Sa5Y_VC01118	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC01124	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01130	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC01154	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC01159	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Sa5Y_VC01159	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Sa5Y_VC01159	SM00493	Sa5Y_VC01159
Sa5Y_VC01167	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VC01169	SM00448	cheY-homologous receiver domain
Sa5Y_VC01169	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC01176	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VC01178	SM00344	helix_turn_helix ASNC type
Sa5Y_VC01181	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC01182	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC01182	SM00091	PAS domain
Sa5Y_VC01202	SM01131	Sa5Y_VC01202
Sa5Y_VC01205	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01206	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01210	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01219	SM00155	Phospholipase D. Active site motifs.
Sa5Y_VC01223	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01230	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01234	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VC01236	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VC01236	SM00073	Histidine Phosphotransfer domain
Sa5Y_VC01236	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01236	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC01236	SM00448	cheY-homologous receiver domain
Sa5Y_VC01236	SM00918	Ligated ion channel L-glutamate- and glycine-binding site
Sa5Y_VC01237	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC01237	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VC01237	SM00448	cheY-homologous receiver domain
Sa5Y_VC01238	SM00448	cheY-homologous receiver domain
Sa5Y_VC01240	SM00020	Trypsin-like serine protease
Sa5Y_VC01245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01247	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC01249	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01250	SM00448	cheY-homologous receiver domain
Sa5Y_VC01250	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC01252	SM00487	DEAD-like helicases superfamily
Sa5Y_VC01252	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC01253	SM00363	S4 RNA-binding domain
Sa5Y_VC01258	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01269	SM00327	von Willebrand factor (vWF) type A domain
Sa5Y_VC01277	SM00028	Tetratricopeptide repeats
Sa5Y_VC01277	SM00386	HAT (Half-A-TPR) repeats
Sa5Y_VC01285	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01286	SM00448	cheY-homologous receiver domain
Sa5Y_VC01288	SM00260	Two component signalling adaptor domain
Sa5Y_VC01288	SM00448	cheY-homologous receiver domain
Sa5Y_VC01291	SM00267	diguanylate cyclase
Sa5Y_VC01299	SM00267	diguanylate cyclase
Sa5Y_VC01300	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC01301	SM00822	Sa5Y_VC01301
Sa5Y_VC01311	SM01022	Sa5Y_VC01311
Sa5Y_VC01318	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01326	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VC01330	SM00420	helix_turn_helix, Deoxyribose operon repressor
Sa5Y_VC01330	SM01134	Sa5Y_VC01330
Sa5Y_VC01331	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01348	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01350	SM01144	Sa5Y_VC01350
Sa5Y_VC01353	SM00852	Probable molybdopterin binding domain
Sa5Y_VC01355	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01358	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01358	SM00448	cheY-homologous receiver domain
Sa5Y_VC01359	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01359	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC01360	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01367	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Sa5Y_VC01376	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC01380	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01382	SM00945	ProQ/FINO family
Sa5Y_VC01383	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Sa5Y_VC01383	SM00245	tail specific protease
Sa5Y_VC01390	SM00981	Sa5Y_VC01390
Sa5Y_VC01392	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01401	SM00954	Region found in RelA / SpoT proteins
Sa5Y_VC01412	SM00479	Sa5Y_VC01412
Sa5Y_VC01417	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01419	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01420	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01420	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC01420	SM00448	cheY-homologous receiver domain
Sa5Y_VC01421	SM00897	FIST N domain
Sa5Y_VC01421	SM01204	Sa5Y_VC01421
Sa5Y_VC01431	SM00100	Cyclic nucleotide-monophosphate binding domain
Sa5Y_VC01431	SM00419	helix_turn_helix, cAMP Regulatory protein
Sa5Y_VC01437	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01457	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01457	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01462	SM00487	DEAD-like helicases superfamily
Sa5Y_VC01462	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC01463	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Sa5Y_VC01463	SM00091	PAS domain
Sa5Y_VC01463	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01464	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01464	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01466	SM00260	Two component signalling adaptor domain
Sa5Y_VC01467	SM00448	cheY-homologous receiver domain
Sa5Y_VC01469	SM00138	Methyltransferase, chemotaxis proteins 
Sa5Y_VC01470	SM00448	cheY-homologous receiver domain
Sa5Y_VC01471	SM00073	Histidine Phosphotransfer domain
Sa5Y_VC01471	SM00260	Two component signalling adaptor domain
Sa5Y_VC01471	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01471	SM01231	Sa5Y_VC01471
Sa5Y_VC01473	SM00448	cheY-homologous receiver domain
Sa5Y_VC01474	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01482	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01482	SM00487	DEAD-like helicases superfamily
Sa5Y_VC01482	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC01482	SM00847	Helicase associated domain (HA2)  Add an annotation
Sa5Y_VC01486	SM00479	Sa5Y_VC01486
Sa5Y_VC01487	SM00267	diguanylate cyclase
Sa5Y_VC01487	SM01079	Sa5Y_VC01487
Sa5Y_VC01491	SM00267	diguanylate cyclase
Sa5Y_VC01493	SM00267	diguanylate cyclase
Sa5Y_VC01496	SM00028	Tetratricopeptide repeats
Sa5Y_VC01496	SM00267	diguanylate cyclase
Sa5Y_VC01502	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VC01505	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01509	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Sa5Y_VC01510	SM00267	diguanylate cyclase
Sa5Y_VC01512	SM00073	Histidine Phosphotransfer domain
Sa5Y_VC01512	SM00091	PAS domain
Sa5Y_VC01512	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01512	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC01512	SM00448	cheY-homologous receiver domain
Sa5Y_VC01513	SM00448	cheY-homologous receiver domain
Sa5Y_VC01513	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VC01526	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Sa5Y_VC01526	SM00895	Sa5Y_VC01526
Sa5Y_VC01541	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01546	SM00448	cheY-homologous receiver domain
Sa5Y_VC01546	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC01547	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01547	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01547	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC01550	SM00448	cheY-homologous receiver domain
Sa5Y_VC01551	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01553	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01553	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01554	SM01005	Alanine racemase, C-terminal domain
Sa5Y_VC01558	SM00091	PAS domain
Sa5Y_VC01558	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01568	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01568	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01571	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01571	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VC01573	SM00100	Cyclic nucleotide-monophosphate binding domain
Sa5Y_VC01573	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VC01574	SM00479	Sa5Y_VC01574
Sa5Y_VC01575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01578	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VC01584	SM00495	Chitin-binding domain type 3
Sa5Y_VC01586	SM00347	helix_turn_helix multiple antibiotic resistance protein
Sa5Y_VC01587	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VC01587	SM00448	cheY-homologous receiver domain
Sa5Y_VC01588	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01588	SM01049	Sa5Y_VC01588
Sa5Y_VC01594	SM00849	Metallo-beta-lactamase superfamily
Sa5Y_VC01604	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VC01605	SM00450	Rhodanese Homology Domain
Sa5Y_VC01606	SM00434	DNA Topoisomerase IV
Sa5Y_VC01612	SM00852	Probable molybdopterin binding domain
Sa5Y_VC01615	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC01615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01615	SM01049	Sa5Y_VC01615
Sa5Y_VC01618	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01621	SM00855	Phosphoglycerate mutase family
Sa5Y_VC01636	SM00411	bacterial (prokaryotic) histone like domain
Sa5Y_VC01637	SM00873	B3/4 domain
Sa5Y_VC01637	SM00874	tRNA synthetase B5 domain
Sa5Y_VC01637	SM00896	Ferredoxin-fold anticodon binding domain
Sa5Y_VC01640	SM00267	diguanylate cyclase
Sa5Y_VC01646	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Sa5Y_VC01646	SM00465	GIY-YIG type nucleases (URI domain)
Sa5Y_VC01647	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VC01647	SM00448	cheY-homologous receiver domain
Sa5Y_VC01648	SM00486	DNA polymerase type-B family
Sa5Y_VC01649	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC01651	SM00841	Elongation factor P, C-terminal
Sa5Y_VC01651	SM01185	Sa5Y_VC01651
Sa5Y_VC01654	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Sa5Y_VC01654	SM00866	Sa5Y_VC01654
Sa5Y_VC01660	SM00020	Trypsin-like serine protease
Sa5Y_VC01667	SM00271	DnaJ molecular chaperone homology domain
Sa5Y_VC01667	SM00671	Sel1-like repeats.
Sa5Y_VC01672	SM00919	Malic enzyme, NAD binding domain
Sa5Y_VC01672	SM01274	Sa5Y_VC01672
Sa5Y_VC01675	SM00267	diguanylate cyclase
Sa5Y_VC01679	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01680	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01681	SM00363	S4 RNA-binding domain
Sa5Y_VC01683	SM00481	DNA polymerase alpha chain like domain
Sa5Y_VC01702	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01703	SM00448	cheY-homologous receiver domain
Sa5Y_VC01714	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01714	SM01086	C-terminal, D2-small domain, of ClpB protein
Sa5Y_VC01716	SM00357	Cold shock protein domain
Sa5Y_VC01730	SM00528	Domain in histone-like proteins of HNS family
Sa5Y_VC01748	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC01748	SM00876	Biotin and Thiamin Synthesis associated domain
Sa5Y_VC01751	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01755	SM00267	diguanylate cyclase
Sa5Y_VC01756	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01764	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01765	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC01770	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01771	SM00448	cheY-homologous receiver domain
Sa5Y_VC01772	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC01772	SM00448	cheY-homologous receiver domain
Sa5Y_VC01773	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01774	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01774	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC01776	SM00448	cheY-homologous receiver domain
Sa5Y_VC01777	SM00448	cheY-homologous receiver domain
Sa5Y_VC01781	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VC01784	SM00495	Chitin-binding domain type 3
Sa5Y_VC01784	SM00636	Sa5Y_VC01784
Sa5Y_VC01793	SM00420	helix_turn_helix, Deoxyribose operon repressor
Sa5Y_VC01793	SM01134	Sa5Y_VC01793
Sa5Y_VC01794	SM00420	helix_turn_helix, Deoxyribose operon repressor
Sa5Y_VC01794	SM01134	Sa5Y_VC01794
Sa5Y_VC01797	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Sa5Y_VC01798	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Sa5Y_VC01800	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VC01800	SM00267	diguanylate cyclase
Sa5Y_VC01805	SM00344	helix_turn_helix ASNC type
Sa5Y_VC01811	SM00493	Sa5Y_VC01811
Sa5Y_VC01813	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01817	SM00448	cheY-homologous receiver domain
Sa5Y_VC01826	SM00226	Low molecular weight phosphatase family
Sa5Y_VC01835	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VC01836	SM00267	diguanylate cyclase
Sa5Y_VC01840	SM00852	Probable molybdopterin binding domain
Sa5Y_VC01841	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC01845	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01845	SM00448	cheY-homologous receiver domain
Sa5Y_VC01847	SM00487	DEAD-like helicases superfamily
Sa5Y_VC01847	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC01853	SM00900	Sa5Y_VC01853
Sa5Y_VC01855	SM00478	endonuclease III
Sa5Y_VC01855	SM00525	Sa5Y_VC01855
Sa5Y_VC01859	SM00479	Sa5Y_VC01859
Sa5Y_VC01874	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Sa5Y_VC01874	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Sa5Y_VC01878	SM00387	Histidine kinase-like ATPases
Sa5Y_VC01879	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC01886	SM00244	prohibitin homologues
Sa5Y_VC01888	SM00422	helix_turn_helix, mercury resistance
Sa5Y_VC01891	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Sa5Y_VC01891	SM00292	breast cancer carboxy-terminal domain
Sa5Y_VC01891	SM00532	Ligase N family
Sa5Y_VC01892	SM00771	ZipA, C-terminal domain (FtsZ-binding)
Sa5Y_VC01899	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC01902	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VC01902	SM01091	Transporter associated domain
Sa5Y_VC01913	SM00936	Penicillin-binding protein 5, C-terminal domain 
Sa5Y_VC01916	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC01929	SM00710	Parallel beta-helix repeats
Sa5Y_VC01941	SM00984	UDP binding domain
Sa5Y_VC01943	SM00226	Low molecular weight phosphatase family
Sa5Y_VC01950	SM00642	Alpha-amylase domain
Sa5Y_VC01952	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VC01954	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC01954	SM00930	Sa5Y_VC01954
Sa5Y_VC01960	SM00028	Tetratricopeptide repeats
Sa5Y_VC01961	SM00267	diguanylate cyclase
Sa5Y_VC01963	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Sa5Y_VC01963	SM00475	5'-3' exonuclease
Sa5Y_VC01967	SM00981	Sa5Y_VC01967
Sa5Y_VC01972	SM00861	Transketolase, pyrimidine binding domain
Sa5Y_VC01989	SM01211	Sa5Y_VC01989
Sa5Y_VC01990	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VC01999	SM00271	DnaJ molecular chaperone homology domain
Sa5Y_VC02016	SM00487	DEAD-like helicases superfamily
Sa5Y_VC02019	SM00857	Resolvase, N terminal domain
Sa5Y_VC02034	SM00530	Helix-turn-helix XRE-family like proteins 
Sa5Y_VC02036	SM00487	DEAD-like helicases superfamily
Sa5Y_VC02036	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC02037	SM00487	DEAD-like helicases superfamily
Sa5Y_VC02037	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC02051	SM00764	Citrate lyase ligase C-terminal domain
Sa5Y_VC02056	SM00091	PAS domain
Sa5Y_VC02056	SM00387	Histidine kinase-like ATPases
Sa5Y_VC02057	SM00448	cheY-homologous receiver domain
Sa5Y_VC02064	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02074	SM00495	Chitin-binding domain type 3
Sa5Y_VC02076	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VC02076	SM01240	Sa5Y_VC02076
Sa5Y_VC02080	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02081	SM00564	beta-propeller repeat
Sa5Y_VC02085	SM00530	Helix-turn-helix XRE-family like proteins 
Sa5Y_VC02087	SM00562	Sa5Y_VC02087
Sa5Y_VC02092	SM00271	DnaJ molecular chaperone homology domain
Sa5Y_VC02101	SM01323	Sa5Y_VC02101
Sa5Y_VC02104	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VC02112	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02118	SM00091	PAS domain
Sa5Y_VC02118	SM00387	Histidine kinase-like ATPases
Sa5Y_VC02118	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC02119	SM00448	cheY-homologous receiver domain
Sa5Y_VC02119	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC02130	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02130	SM01086	C-terminal, D2-small domain, of ClpB protein
Sa5Y_VC02132	SM00363	S4 RNA-binding domain
Sa5Y_VC02136	SM00830	Chorismate mutase type II
Sa5Y_VC02138	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC02138	SM00267	diguanylate cyclase
Sa5Y_VC02142	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02144	SM00830	Chorismate mutase type II
Sa5Y_VC02147	SM00448	cheY-homologous receiver domain
Sa5Y_VC02147	SM00850	LytTr DNA-binding domain
Sa5Y_VC02158	SM00904	Riboflavin kinase
Sa5Y_VC02161	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Sa5Y_VC02167	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Sa5Y_VC02169	SM00927	DNA mismatch repair enzyme MutH
Sa5Y_VC02172	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02174	SM00937	Sa5Y_VC02174
Sa5Y_VC02177	SM00487	DEAD-like helicases superfamily
Sa5Y_VC02177	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC02179	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC02179	SM00267	diguanylate cyclase
Sa5Y_VC02184	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC02184	SM00091	PAS domain
Sa5Y_VC02184	SM00267	diguanylate cyclase
Sa5Y_VC02188	SM00347	helix_turn_helix multiple antibiotic resistance protein
Sa5Y_VC02189	SM00028	Tetratricopeptide repeats
Sa5Y_VC02190	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC02190	SM00322	K homology RNA-binding domain
Sa5Y_VC02191	SM01387	Sa5Y_VC02191
Sa5Y_VC02196	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC02196	SM00322	K homology RNA-binding domain
Sa5Y_VC02205	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02207	SM01103	Sa5Y_VC02207
Sa5Y_VC02211	SM00363	S4 RNA-binding domain
Sa5Y_VC02220	SM00091	PAS domain
Sa5Y_VC02220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC02220	SM00387	Histidine kinase-like ATPases
Sa5Y_VC02220	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC02220	SM00448	cheY-homologous receiver domain
Sa5Y_VC02224	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02225	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02229	SM01068	Putative carbohydrate binding domain
Sa5Y_VC02231	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02235	SM00938	Nitrogen regulatory protein P-II
Sa5Y_VC02240	SM00487	DEAD-like helicases superfamily
Sa5Y_VC02240	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC02240	SM00847	Helicase associated domain (HA2)  Add an annotation
Sa5Y_VC02250	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02252	SM00947	Carbonic anhydrase
Sa5Y_VC02259	SM00749	bacterial OsmY and nodulation domain
Sa5Y_VC02269	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Sa5Y_VC02270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Sa5Y_VC02275	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02275	SM00962	SRP54-type protein, GTPase domain
Sa5Y_VC02275	SM00963	SRP54-type protein, helical bundle domain
Sa5Y_VC02278	SM01091	Transporter associated domain
Sa5Y_VC02283	SM00829	Enoylreductase
Sa5Y_VC02297	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Sa5Y_VC02299	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02301	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02306	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Sa5Y_VC02306	SM00534	ATPase domain of DNA mismatch repair MUTS family
Sa5Y_VC02308	SM00257	Lysin motif
Sa5Y_VC02317	SM00905	Dihydroneopterin aldolase
Sa5Y_VC02318	SM01207	Sa5Y_VC02318
Sa5Y_VC02323	SM00400	zinc finger
Sa5Y_VC02323	SM00493	Sa5Y_VC02323
Sa5Y_VC02323	SM00766	DNA primase DnaG DnaB-binding
Sa5Y_VC02326	SM00563	Phosphate acyltransferases
Sa5Y_VC02329	SM00420	helix_turn_helix, Deoxyribose operon repressor
Sa5Y_VC02329	SM01134	Sa5Y_VC02329
Sa5Y_VC02338	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Sa5Y_VC02341	SM00861	Transketolase, pyrimidine binding domain
Sa5Y_VC02343	SM00731	SprT homologues.
Sa5Y_VC02348	SM00732	Likely ribonuclease with RNase H fold.
Sa5Y_VC02349	SM00363	S4 RNA-binding domain
Sa5Y_VC02350	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VC02352	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02356	SM01152	Sa5Y_VC02356
Sa5Y_VC02359	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VC02362	SM00478	endonuclease III
Sa5Y_VC02362	SM00525	Sa5Y_VC02362
Sa5Y_VC02369	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC02369	SM01049	Sa5Y_VC02369
Sa5Y_VC02375	SM00271	DnaJ molecular chaperone homology domain
Sa5Y_VC02379	SM00650	Ribosomal RNA adenine dimethylases
Sa5Y_VC02402	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VC02416	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02417	SM00028	Tetratricopeptide repeats
Sa5Y_VC02419	SM00965	Secretin and TonB N terminus short domain
Sa5Y_VC02423	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VC02423	SM00267	diguanylate cyclase
Sa5Y_VC02425	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VC02432	SM01018	B12 binding domain
Sa5Y_VC02456	SM01005	Alanine racemase, C-terminal domain
Sa5Y_VC02457	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02466	SM00838	Elongation factor G C-terminus
Sa5Y_VC02466	SM00889	Elongation factor G, domain IV
Sa5Y_VC02474	SM00320	WD40 repeats
Sa5Y_VC02477	SM00244	prohibitin homologues
Sa5Y_VC02478	SM00244	prohibitin homologues
Sa5Y_VC02482	SM00853	MutL C terminal dimerisation domain
Sa5Y_VC02482	SM01340	Sa5Y_VC02482
Sa5Y_VC02483	SM00257	Lysin motif
Sa5Y_VC02483	SM00646	Sa5Y_VC02483
Sa5Y_VC02495	SM00479	Sa5Y_VC02495
Sa5Y_VC02507	SM00663	RNA polymerase I subunit A N-terminus
Sa5Y_VC02513	SM00649	Ribosomal protein L11/L12
Sa5Y_VC02514	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Sa5Y_VC02514	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Sa5Y_VC02525	SM00155	Phospholipase D. Active site motifs.
Sa5Y_VC02535	SM00357	Cold shock protein domain
Sa5Y_VC02535	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02535	SM00959	Rho termination factor, N-terminal domain
Sa5Y_VC02537	SM00487	DEAD-like helicases superfamily
Sa5Y_VC02537	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC02539	SM00387	Histidine kinase-like ATPases
Sa5Y_VC02539	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VC02539	SM00448	cheY-homologous receiver domain
Sa5Y_VC02541	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VC02542	SM00479	Sa5Y_VC02542
Sa5Y_VC02546	SM00878	Biotin carboxylase C-terminal domain
Sa5Y_VC02550	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VC02559	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC02559	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC02559	SM01049	Sa5Y_VC02559
Sa5Y_VC02562	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VC02563	SM00422	helix_turn_helix, mercury resistance
Sa5Y_VC02564	SM00798	AICARFT/IMPCHase bienzyme
Sa5Y_VC02564	SM00851	MGS-like domain
Sa5Y_VC02565	SM01209	Sa5Y_VC02565
Sa5Y_VC02565	SM01210	Sa5Y_VC02565
Sa5Y_VC02567	SM00411	bacterial (prokaryotic) histone like domain
Sa5Y_VC02579	SM00986	Uracil DNA glycosylase superfamily
Sa5Y_VC02579	SM00987	UreE urease accessory protein, C-terminal domain 
Sa5Y_VC02581	SM00849	Metallo-beta-lactamase superfamily
Sa5Y_VC02581	SM01027	Beta-Casp domain
Sa5Y_VC02598	SM00858	Sa5Y_VC02598
Sa5Y_VC02612	SM01321	Sa5Y_VC02612
Sa5Y_VC02627	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Sa5Y_VC02627	SM01232	Sa5Y_VC02627
Sa5Y_VC02632	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VC02632	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VC02632	SM01049	Sa5Y_VC02632
Sa5Y_VC02652	SM00487	DEAD-like helicases superfamily
Sa5Y_VC02658	SM00341	Helicase and RNase D C-terminal
Sa5Y_VC02658	SM00487	DEAD-like helicases superfamily
Sa5Y_VC02658	SM00490	helicase superfamily c-terminal domain
Sa5Y_VC02658	SM00956	Sa5Y_VC02658
Sa5Y_VC02661	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VC02672	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02705	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02714	SM00470	ParB-like nuclease domain
Sa5Y_VC02719	SM01228	Sa5Y_VC02719
Sa5Y_VC02726	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VC02728	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VCA02729	SM00470	ParB-like nuclease domain
Sa5Y_VCA02737	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA02737	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA02737	SM01049	Sa5Y_VCA02737
Sa5Y_VCA02739	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VCA02742	SM00642	Alpha-amylase domain
Sa5Y_VCA02753	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
Sa5Y_VCA02753	SM00495	Chitin-binding domain type 3
Sa5Y_VCA02753	SM00636	Sa5Y_VCA02753
Sa5Y_VCA02757	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA02757	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA02761	SM00014	Acid phosphatase homologues
Sa5Y_VCA02771	SM00245	tail specific protease
Sa5Y_VCA02772	SM00267	diguanylate cyclase
Sa5Y_VCA02773	SM00028	Tetratricopeptide repeats
Sa5Y_VCA02777	SM00422	helix_turn_helix, mercury resistance
Sa5Y_VCA02779	SM00257	Lysin motif
Sa5Y_VCA02781	SM00487	DEAD-like helicases superfamily
Sa5Y_VCA02781	SM00490	helicase superfamily c-terminal domain
Sa5Y_VCA02787	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA02787	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA02791	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA02792	SM00267	diguanylate cyclase
Sa5Y_VCA02798	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VCA02798	SM00267	diguanylate cyclase
Sa5Y_VCA02802	SM00422	helix_turn_helix, mercury resistance
Sa5Y_VCA02815	SM00450	Rhodanese Homology Domain
Sa5Y_VCA02816	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VCA02831	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA02831	SM01086	C-terminal, D2-small domain, of ClpB protein
Sa5Y_VCA02832	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA02841	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA02845	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VCA02848	SM00100	Cyclic nucleotide-monophosphate binding domain
Sa5Y_VCA02852	SM00495	Chitin-binding domain type 3
Sa5Y_VCA02853	SM00091	PAS domain
Sa5Y_VCA02853	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA02854	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA02854	SM00448	cheY-homologous receiver domain
Sa5Y_VCA02875	SM00267	diguanylate cyclase
Sa5Y_VCA02877	SM00357	Cold shock protein domain
Sa5Y_VCA02880	SM00028	Tetratricopeptide repeats
Sa5Y_VCA02881	SM00327	von Willebrand factor (vWF) type A domain
Sa5Y_VCA02885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA02885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA02891	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Sa5Y_VCA02891	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA02894	SM00357	Cold shock protein domain
Sa5Y_VCA02898	SM00448	cheY-homologous receiver domain
Sa5Y_VCA02905	SM01240	Sa5Y_VCA02905
Sa5Y_VCA02907	SM00487	DEAD-like helicases superfamily
Sa5Y_VCA02907	SM00490	helicase superfamily c-terminal domain
Sa5Y_VCA02908	SM00487	DEAD-like helicases superfamily
Sa5Y_VCA02908	SM00490	helicase superfamily c-terminal domain
Sa5Y_VCA02912	SM00448	cheY-homologous receiver domain
Sa5Y_VCA02912	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VCA02913	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA02920	SM00458	Ricin-type beta-trefoil
Sa5Y_VCA02921	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA02921	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA02924	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
Sa5Y_VCA02930	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA02931	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA02938	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA02944	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA02944	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA02944	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VCA02945	SM00448	cheY-homologous receiver domain
Sa5Y_VCA02945	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VCA02948	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Sa5Y_VCA02950	SM01007	Class II Aldolase and Adducin N-terminal domain
Sa5Y_VCA02953	SM00420	helix_turn_helix, Deoxyribose operon repressor
Sa5Y_VCA02953	SM01134	Sa5Y_VCA02953
Sa5Y_VCA02956	SM00642	Alpha-amylase domain
Sa5Y_VCA02960	SM00448	cheY-homologous receiver domain
Sa5Y_VCA02960	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VCA02961	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA02961	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VCA02966	SM00422	helix_turn_helix, mercury resistance
Sa5Y_VCA02968	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA02970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA02970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA02972	SM00936	Penicillin-binding protein 5, C-terminal domain 
Sa5Y_VCA02975	SM01057	Eukaryotic-type carbonic anhydrase
Sa5Y_VCA02979	SM00530	Helix-turn-helix XRE-family like proteins 
Sa5Y_VCA02981	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Sa5Y_VCA03002	SM00507	HNH nucleases
Sa5Y_VCA03007	SM01022	Sa5Y_VCA03007
Sa5Y_VCA03009	SM00507	HNH nucleases
Sa5Y_VCA03024	SM00326	Src homology 3 domains
Sa5Y_VCA03067	SM00507	HNH nucleases
Sa5Y_VCA03069	SM00507	HNH nucleases
Sa5Y_VCA03084	SM00360	RNA recognition motif
Sa5Y_VCA03101	SM00255	Toll - interleukin 1 - resistance
Sa5Y_VCA03108	SM00479	Sa5Y_VCA03108
Sa5Y_VCA03140	SM00530	Helix-turn-helix XRE-family like proteins 
Sa5Y_VCA03143	SM00360	RNA recognition motif
Sa5Y_VCA03150	SM00954	Region found in RelA / SpoT proteins
Sa5Y_VCA03169	SM00953	Sa5Y_VCA03169
Sa5Y_VCA03179	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VCA03196	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VCA03199	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03199	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03203	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Sa5Y_VCA03206	SM00890	Domain of unknown function
Sa5Y_VCA03207	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03207	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VCA03208	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03208	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VCA03212	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VCA03215	SM00867	YceI-like domain 
Sa5Y_VCA03216	SM00116	Domain in cystathionine beta-synthase and other proteins.
Sa5Y_VCA03224	SM00782	PhnA Zinc-Ribbon
Sa5Y_VCA03230	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VCA03230	SM00267	diguanylate cyclase
Sa5Y_VCA03234	SM00267	diguanylate cyclase
Sa5Y_VCA03237	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Sa5Y_VCA03237	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Sa5Y_VCA03239	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03239	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VCA03240	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03240	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VCA03248	SM00881	CoA binding domain
Sa5Y_VCA03261	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03271	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Sa5Y_VCA03271	SM00866	Sa5Y_VCA03271
Sa5Y_VCA03273	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03286	SM00852	Probable molybdopterin binding domain
Sa5Y_VCA03289	SM00450	Rhodanese Homology Domain
Sa5Y_VCA03293	SM00861	Transketolase, pyrimidine binding domain
Sa5Y_VCA03312	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Sa5Y_VCA03314	SM00450	Rhodanese Homology Domain
Sa5Y_VCA03316	SM00563	Phosphate acyltransferases
Sa5Y_VCA03324	SM00354	helix_turn _helix lactose operon repressor
Sa5Y_VCA03325	SM00640	Glycosyl hydrolases family 32
Sa5Y_VCA03328	SM00091	PAS domain
Sa5Y_VCA03328	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03332	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03332	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03335	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VCA03335	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03336	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03336	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03339	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Sa5Y_VCA03343	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VCA03344	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VCA03344	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03345	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03350	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03354	SM00822	Sa5Y_VCA03354
Sa5Y_VCA03359	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Sa5Y_VCA03359	SM00267	diguanylate cyclase
Sa5Y_VCA03361	SM00495	Chitin-binding domain type 3
Sa5Y_VCA03361	SM00636	Sa5Y_VCA03361
Sa5Y_VCA03365	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03366	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03366	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03366	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VCA03370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03370	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03370	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VCA03370	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03372	SM00851	MGS-like domain
Sa5Y_VCA03379	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03380	SM00989	Sa5Y_VCA03380
Sa5Y_VCA03384	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03388	SM00028	Tetratricopeptide repeats
Sa5Y_VCA03393	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03393	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VCA03393	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03415	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VCA03415	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Sa5Y_VCA03416	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03418	SM00327	von Willebrand factor (vWF) type A domain
Sa5Y_VCA03419	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03424	SM00487	DEAD-like helicases superfamily
Sa5Y_VCA03424	SM00490	helicase superfamily c-terminal domain
Sa5Y_VCA03428	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03428	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03431	SM00796	Allophanate hydrolase subunit 1
Sa5Y_VCA03432	SM00797	Allophanate hydrolase subunit 2
Sa5Y_VCA03434	SM00984	UDP binding domain
Sa5Y_VCA03436	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03439	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VCA03439	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Sa5Y_VCA03439	SM00267	diguanylate cyclase
Sa5Y_VCA03441	SM00271	DnaJ molecular chaperone homology domain
Sa5Y_VCA03450	SM00020	Trypsin-like serine protease
Sa5Y_VCA03451	SM00487	DEAD-like helicases superfamily
Sa5Y_VCA03451	SM00490	helicase superfamily c-terminal domain
Sa5Y_VCA03452	SM00357	Cold shock protein domain
Sa5Y_VCA03452	SM00955	Sa5Y_VCA03452
Sa5Y_VCA03464	SM00924	MgtE intracellular N domain
Sa5Y_VCA03465	SM00883	Chaperonin 10 Kd subunit
Sa5Y_VCA03482	SM01266	Sa5Y_VCA03482
Sa5Y_VCA03483	SM01091	Transporter associated domain
Sa5Y_VCA03487	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Sa5Y_VCA03493	SM00267	diguanylate cyclase
Sa5Y_VCA03495	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03495	SM00850	LytTr DNA-binding domain
Sa5Y_VCA03496	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03500	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03503	SM00642	Alpha-amylase domain
Sa5Y_VCA03506	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Sa5Y_VCA03506	SM00091	PAS domain
Sa5Y_VCA03506	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03511	SM00316	Ribosomal protein S1-like RNA-binding domain
Sa5Y_VCA03511	SM00357	Cold shock protein domain
Sa5Y_VCA03511	SM00955	Sa5Y_VCA03511
Sa5Y_VCA03513	SM00357	Cold shock protein domain
Sa5Y_VCA03520	SM00829	Enoylreductase
Sa5Y_VCA03528	SM00481	DNA polymerase alpha chain like domain
Sa5Y_VCA03529	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VCA03532	SM01350	Sa5Y_VCA03532
Sa5Y_VCA03534	SM00849	Metallo-beta-lactamase superfamily
Sa5Y_VCA03540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03543	SM00729	Elongator protein 3, MiaB family, Radical SAM
Sa5Y_VCA03549	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03558	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA03563	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Sa5Y_VCA03563	SM00267	diguanylate cyclase
Sa5Y_VCA03564	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Sa5Y_VCA03566	SM00357	Cold shock protein domain
Sa5Y_VCA03569	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA03571	SM00091	PAS domain
Sa5Y_VCA03571	SM00267	diguanylate cyclase
Sa5Y_VCA03572	SM00420	helix_turn_helix, Deoxyribose operon repressor
Sa5Y_VCA03572	SM01134	Sa5Y_VCA03572
Sa5Y_VCA03579	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03582	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
Sa5Y_VCA03584	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VCA03586	SM00260	Two component signalling adaptor domain
Sa5Y_VCA03586	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03587	SM00347	helix_turn_helix multiple antibiotic resistance protein
Sa5Y_VCA03588	SM00267	diguanylate cyclase
Sa5Y_VCA03592	SM00267	diguanylate cyclase
Sa5Y_VCA03592	SM01079	Sa5Y_VCA03592
Sa5Y_VCA03597	SM00267	diguanylate cyclase
Sa5Y_VCA03604	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03604	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03607	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03608	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VCA03609	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03618	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03620	SM00487	DEAD-like helicases superfamily
Sa5Y_VCA03620	SM00490	helicase superfamily c-terminal domain
Sa5Y_VCA03621	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA03624	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03629	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA03633	SM00347	helix_turn_helix multiple antibiotic resistance protein
Sa5Y_VCA03641	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03642	SM00091	PAS domain
Sa5Y_VCA03642	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03646	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA03646	SM01009	AlkA N-terminal domain
Sa5Y_VCA03650	SM01154	Sa5Y_VCA03650
Sa5Y_VCA03653	SM01321	Sa5Y_VCA03653
Sa5Y_VCA03654	SM00671	Sel1-like repeats.
Sa5Y_VCA03657	SM00642	Alpha-amylase domain
Sa5Y_VCA03659	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03659	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03661	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03661	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03664	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03666	SM00062	Bacterial periplasmic substrate-binding proteins
Sa5Y_VCA03674	SM00849	Metallo-beta-lactamase superfamily
Sa5Y_VCA03679	SM00347	helix_turn_helix multiple antibiotic resistance protein
Sa5Y_VCA03680	SM00450	Rhodanese Homology Domain
Sa5Y_VCA03682	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA03685	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03694	SM00344	helix_turn_helix ASNC type
Sa5Y_VCA03695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03700	SM00342	helix_turn_helix, arabinose operon control protein
Sa5Y_VCA03703	SM00421	helix_turn_helix, Lux Regulon
Sa5Y_VCA03707	SM00052	Putative diguanylate phosphodiesterase
Sa5Y_VCA03707	SM00267	diguanylate cyclase
Sa5Y_VCA03708	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03710	SM00331	Sigma factor PP2C-like phosphatases
Sa5Y_VCA03710	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03712	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03713	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03715	SM00138	Methyltransferase, chemotaxis proteins 
Sa5Y_VCA03716	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Sa5Y_VCA03716	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Sa5Y_VCA03717	SM00260	Two component signalling adaptor domain
Sa5Y_VCA03718	SM00260	Two component signalling adaptor domain
Sa5Y_VCA03719	SM00073	Histidine Phosphotransfer domain
Sa5Y_VCA03719	SM00260	Two component signalling adaptor domain
Sa5Y_VCA03719	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03719	SM01231	Sa5Y_VCA03719
Sa5Y_VCA03720	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03725	SM00382	ATPases associated with a variety of cellular activities
Sa5Y_VCA03727	SM00387	Histidine kinase-like ATPases
Sa5Y_VCA03727	SM00388	His Kinase A (phosphoacceptor) domain
Sa5Y_VCA03728	SM00448	cheY-homologous receiver domain
Sa5Y_VCA03728	SM00862	Transcriptional regulatory protein, C terminal
Sa5Y_VCA03730	SM00822	Sa5Y_VCA03730
Sa5Y_VCA03731	SM01236	Sa5Y_VCA03731
