locus-tag class description EN12_00005 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_00010 PF00528 Binding-protein-dependent transport system inner membrane component EN12_00015 PF00005 ABC transporter EN12_00020 PF00468 Ribosomal protein L34 EN12_00025 PF00825 Ribonuclease P EN12_00030 PF14849 YidC periplasmic domain EN12_00030 PF02096 60Kd inner membrane protein EN12_00035 PF01926 50S ribosome-binding GTPase EN12_00035 PF10396 GTP-binding protein TrmE N-terminus EN12_00035 PF12631 MnmE helical domain EN12_00040 PF00258 Flavodoxin EN12_00045 PF01134 Glucose inhibited division protein A EN12_00045 PF13932 GidA associated domain EN12_00050 PF02527 rRNA small subunit methyltransferase G EN12_00055 PF13614 AAA domain EN12_00060 PF17762 HTH domain found in ParB protein EN12_00060 PF02195 ParB-like nuclease domain EN12_00065 PF03899 ATP synthase I chain EN12_00070 PF00119 ATP synthase A chain EN12_00075 PF00137 ATP synthase subunit C EN12_00080 PF00430 ATP synthase B/B' CF(0) EN12_00085 PF00213 ATP synthase delta (OSCP) subunit EN12_00090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EN12_00090 PF00306 ATP synthase alpha/beta chain, C terminal domain EN12_00090 PF02874 ATP synthase alpha/beta family, beta-barrel domain EN12_00095 PF00231 ATP synthase EN12_00100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EN12_00100 PF02874 ATP synthase alpha/beta family, beta-barrel domain EN12_00105 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EN12_00105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EN12_00110 PF12804 MobA-like NTP transferase domain EN12_00110 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_00115 PF07690 Major Facilitator Superfamily EN12_00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_00120 PF03466 LysR substrate binding domain EN12_00125 PF02803 Thiolase, C-terminal domain EN12_00125 PF00108 Thiolase, N-terminal domain EN12_00130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EN12_00130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EN12_00130 PF00378 Enoyl-CoA hydratase/isomerase EN12_00135 PF01205 Uncharacterized protein family UPF0029 EN12_00135 PF09186 Domain of unknown function (DUF1949) EN12_00140 PF02386 Cation transport protein EN12_00145 PF12724 Flavodoxin domain EN12_00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_00190 PF03466 LysR substrate binding domain EN12_00195 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EN12_00195 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EN12_00200 PF04380 Membrane fusogenic activity EN12_00205 PF00873 AcrB/AcrD/AcrF family EN12_00210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EN12_00215 PF00440 Bacterial regulatory proteins, tetR family EN12_00220 PF00580 UvrD/REP helicase N-terminal domain EN12_00220 PF13361 UvrD-like helicase C-terminal domain EN12_00225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EN12_00260 PF00005 ABC transporter EN12_00260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_00265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EN12_00275 PF00528 Binding-protein-dependent transport system inner membrane component EN12_00275 PF12911 N-terminal TM domain of oligopeptide transport permease C EN12_00285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EN12_00350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EN12_00350 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_00355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EN12_00360 PF01432 Peptidase family M3 EN12_00365 PF13361 UvrD-like helicase C-terminal domain EN12_00365 PF00580 UvrD/REP helicase N-terminal domain EN12_00370 PF01810 LysE type translocator EN12_00375 PF12833 Helix-turn-helix domain EN12_00390 PF09382 RQC domain EN12_00390 PF00271 Helicase conserved C-terminal domain EN12_00390 PF00570 HRDC domain EN12_00390 PF16124 RecQ zinc-binding EN12_00390 PF00270 DEAD/DEAH box helicase EN12_00405 PF00664 ABC transporter transmembrane region EN12_00405 PF00005 ABC transporter EN12_00410 PF07715 TonB-dependent Receptor Plug Domain EN12_00410 PF00593 TonB dependent receptor EN12_00415 PF00005 ABC transporter EN12_00420 PF01497 Periplasmic binding protein EN12_00425 PF01032 FecCD transport family EN12_00430 PF01418 Helix-turn-helix domain, rpiR family EN12_00430 PF01380 SIS domain EN12_00435 PF13580 SIS domain EN12_00440 PF02378 Phosphotransferase system, EIIC EN12_00440 PF00367 phosphotransferase system, EIIB EN12_00445 PF03350 Uncharacterized protein family, UPF0114 EN12_00450 PF08340 Domain of unknown function (DUF1732) EN12_00450 PF03755 YicC-like family, N-terminal region EN12_00455 PF03725 3' exoribonuclease family, domain 2 EN12_00455 PF01138 3' exoribonuclease family, domain 1 EN12_00460 PF00156 Phosphoribosyl transferase domain EN12_00465 PF03279 Bacterial lipid A biosynthesis acyltransferase EN12_00470 PF03279 Bacterial lipid A biosynthesis acyltransferase EN12_00475 PF00440 Bacterial regulatory proteins, tetR family EN12_00480 PF02441 Flavoprotein EN12_00480 PF04127 DNA / pantothenate metabolism flavoprotein EN12_00485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_00485 PF02743 Cache domain EN12_00485 PF00672 HAMP domain EN12_00490 PF04002 RadC-like JAB domain EN12_00495 PF00830 Ribosomal L28 family EN12_00500 PF00471 Ribosomal protein L33 EN12_00510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EN12_00510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EN12_00510 PF06827 Zinc finger found in FPG and IleRS EN12_00515 PF01467 Cytidylyltransferase-like EN12_00520 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EN12_00525 PF00535 Glycosyl transferase family 2 EN12_00530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EN12_00565 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EN12_00570 PF04488 Glycosyltransferase sugar-binding region containing DXD motif EN12_00580 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EN12_00595 PF01522 Polysaccharide deacetylase EN12_00595 PF00457 Glycosyl hydrolases family 11 EN12_00600 PF01370 NAD dependent epimerase/dehydratase family EN12_00605 PF01050 Mannose-6-phosphate isomerase EN12_00605 PF00483 Nucleotidyl transferase EN12_00610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EN12_00610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EN12_00610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EN12_00610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EN12_00615 PF16363 GDP-mannose 4,6 dehydratase EN12_00620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EN12_00635 PF14524 Wzt C-terminal domain EN12_00635 PF00005 ABC transporter EN12_00645 PF00501 AMP-binding enzyme EN12_00645 PF13193 AMP-binding enzyme C-terminal domain EN12_00650 PF00465 Iron-containing alcohol dehydrogenase EN12_00650 PF00171 Aldehyde dehydrogenase family EN12_00660 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_00665 PF01609 Transposase DDE domain EN12_00665 PF13808 DDE_Tnp_1-associated EN12_00685 PF02719 Polysaccharide biosynthesis protein EN12_00690 PF01370 NAD dependent epimerase/dehydratase family EN12_00695 PF02397 Bacterial sugar transferase EN12_00700 PF00753 Metallo-beta-lactamase superfamily EN12_00700 PF10996 Beta-Casp domain EN12_00700 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EN12_00705 PF00924 Mechanosensitive ion channel EN12_00710 PF03167 Uracil DNA glycosylase superfamily EN12_00715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EN12_00720 PF04222 Protein of unknown function (DUF416) EN12_00725 PF01238 Phosphomannose isomerase type I EN12_00730 PF00480 ROK family EN12_00735 PF01595 Cyclin M transmembrane N-terminal domain EN12_00735 PF00571 CBS domain EN12_00740 PF00216 Bacterial DNA-binding protein EN12_00750 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EN12_00750 PF02843 Phosphoribosylglycinamide synthetase, C domain EN12_00750 PF02844 Phosphoribosylglycinamide synthetase, N domain EN12_00755 PF02142 MGS-like domain EN12_00755 PF01808 AICARFT/IMPCHase bienzyme EN12_00760 PF13411 MerR HTH family regulatory protein EN12_00765 PF18500 CadC C-terminal domain 1 EN12_00765 PF00486 Transcriptional regulatory protein, C terminal EN12_00770 PF13520 Amino acid permease EN12_00775 PF01276 Orn/Lys/Arg decarboxylase, major domain EN12_00775 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EN12_00775 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EN12_00780 PF17200 Single Cache domain 2 EN12_00780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_00780 PF00672 HAMP domain EN12_00795 PF00593 TonB dependent receptor EN12_00795 PF07715 TonB-dependent Receptor Plug Domain EN12_00800 PF01081 KDPG and KHG aldolase EN12_00805 PF02447 GntP family permease EN12_00810 PF01202 Shikimate kinase EN12_00815 PF00920 Dehydratase family EN12_00820 PF00356 Bacterial regulatory proteins, lacI family EN12_00820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EN12_00825 PF02954 Bacterial regulatory protein, Fis family EN12_00830 PF01207 Dihydrouridine synthase (Dus) EN12_00840 PF02785 Biotin carboxylase C-terminal domain EN12_00840 PF00289 Biotin carboxylase, N-terminal domain EN12_00840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EN12_00845 PF00364 Biotin-requiring enzyme EN12_00850 PF01220 Dehydroquinase class II EN12_00855 PF13193 AMP-binding enzyme C-terminal domain EN12_00855 PF00501 AMP-binding enzyme EN12_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus EN12_00870 PF12832 MFS_1 like family EN12_00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_00875 PF00512 His Kinase A (phospho-acceptor) domain EN12_00875 PF09456 RcsC Alpha-Beta-Loop (ABL) EN12_00875 PF00072 Response regulator receiver domain EN12_00880 PF02541 Ppx/GppA phosphatase family EN12_00885 PF00270 DEAD/DEAH box helicase EN12_00885 PF00271 Helicase conserved C-terminal domain EN12_00890 PF00085 Thioredoxin EN12_00895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EN12_00895 PF07498 Rho termination factor, N-terminal domain EN12_00895 PF07497 Rho termination factor, RNA-binding domain EN12_00905 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EN12_00910 PF00970 Oxidoreductase FAD-binding domain EN12_00910 PF00111 2Fe-2S iron-sulfur cluster binding domain EN12_00910 PF00175 Oxidoreductase NAD-binding domain EN12_00915 PF00175 Oxidoreductase NAD-binding domain EN12_00950 PF13091 PLD-like domain EN12_00960 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EN12_00960 PF01565 FAD binding domain EN12_00965 PF03099 Biotin/lipoate A/B protein ligase family EN12_00965 PF08279 HTH domain EN12_00965 PF02237 Biotin protein ligase C terminal domain EN12_00970 PF00485 Phosphoribulokinase / Uridine kinase family EN12_00995 PF03143 Elongation factor Tu C-terminal domain EN12_00995 PF03144 Elongation factor Tu domain 2 EN12_00995 PF00009 Elongation factor Tu GTP binding domain EN12_01000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EN12_01005 PF00467 KOW motif EN12_01005 PF02357 Transcription termination factor nusG EN12_01010 PF00298 Ribosomal protein L11, RNA binding domain EN12_01010 PF03946 Ribosomal protein L11, N-terminal domain EN12_01015 PF00687 Ribosomal protein L1p/L10e family EN12_01020 PF00466 Ribosomal protein L10 EN12_01025 PF00542 Ribosomal protein L7/L12 C-terminal domain EN12_01025 PF16320 Ribosomal protein L7/L12 dimerisation domain EN12_01030 PF10385 RNA polymerase beta subunit external 1 domain EN12_01030 PF04563 RNA polymerase beta subunit EN12_01030 PF04561 RNA polymerase Rpb2, domain 2 EN12_01030 PF04565 RNA polymerase Rpb2, domain 3 EN12_01030 PF00562 RNA polymerase Rpb2, domain 6 EN12_01030 PF04560 RNA polymerase Rpb2, domain 7 EN12_01035 PF00623 RNA polymerase Rpb1, domain 2 EN12_01035 PF05000 RNA polymerase Rpb1, domain 4 EN12_01035 PF04997 RNA polymerase Rpb1, domain 1 EN12_01035 PF04983 RNA polymerase Rpb1, domain 3 EN12_01035 PF04998 RNA polymerase Rpb1, domain 5 EN12_01040 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EN12_01045 PF09297 NADH pyrophosphatase zinc ribbon domain EN12_01045 PF00293 NUDIX domain EN12_01050 PF01208 Uroporphyrinogen decarboxylase (URO-D) EN12_01055 PF00440 Bacterial regulatory proteins, tetR family EN12_01055 PF08360 QacR-like protein, C-terminal region EN12_01065 PF01551 Peptidase family M23 EN12_01070 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EN12_01070 PF01676 Metalloenzyme superfamily EN12_01080 PF00939 Sodium:sulfate symporter transmembrane region EN12_01085 PF02666 Phosphatidylserine decarboxylase EN12_01090 PF03193 RsgA GTPase EN12_01095 PF00929 Exonuclease EN12_01145 PF08331 Domain of unknown function (DUF1730) EN12_01150 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EN12_01155 PF01520 N-acetylmuramoyl-L-alanine amidase EN12_01160 PF01119 DNA mismatch repair protein, C-terminal domain EN12_01160 PF08676 MutL C terminal dimerisation domain EN12_01170 PF17209 Hfq protein EN12_01175 PF13167 GTP-binding GTPase N-terminal EN12_01175 PF01926 50S ribosome-binding GTPase EN12_01175 PF16360 GTP-binding GTPase Middle Region EN12_01180 PF01145 SPFH domain / Band 7 family EN12_01180 PF12221 Bacterial membrane protein N terminal EN12_01185 PF01145 SPFH domain / Band 7 family EN12_01190 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) EN12_01195 PF04102 SlyX EN12_01205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EN12_01205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EN12_01210 PF08348 YheO-like PAS domain EN12_01210 PF13309 HTH domain EN12_01215 PF02635 DsrE/DsrF-like family EN12_01220 PF02635 DsrE/DsrF-like family EN12_01230 PF00164 Ribosomal protein S12/S23 EN12_01235 PF00177 Ribosomal protein S7p/S5e EN12_01240 PF14492 Elongation Factor G, domain II EN12_01240 PF00679 Elongation factor G C-terminus EN12_01240 PF03144 Elongation factor Tu domain 2 EN12_01240 PF00009 Elongation factor Tu GTP binding domain EN12_01240 PF03764 Elongation factor G, domain IV EN12_01245 PF03144 Elongation factor Tu domain 2 EN12_01245 PF00009 Elongation factor Tu GTP binding domain EN12_01245 PF03143 Elongation factor Tu C-terminal domain EN12_01250 PF04324 BFD-like [2Fe-2S] binding domain EN12_01255 PF00210 Ferritin-like domain EN12_01260 PF01250 Ribosomal protein S6 EN12_01265 PF00436 Single-strand binding protein family EN12_01270 PF01084 Ribosomal protein S18 EN12_01275 PF01281 Ribosomal protein L9, N-terminal domain EN12_01275 PF03948 Ribosomal protein L9, C-terminal domain EN12_01285 PF03796 DnaB-like helicase C terminal domain EN12_01285 PF00772 DnaB-like helicase N terminal domain EN12_01290 PF00842 Alanine racemase, C-terminal domain EN12_01290 PF01168 Alanine racemase, N-terminal domain EN12_01295 PF01894 Uncharacterised protein family UPF0047 EN12_01300 PF00342 Phosphoglucose isomerase EN12_01305 PF12706 Beta-lactamase superfamily domain EN12_01315 PF01475 Ferric uptake regulator family EN12_01320 PF01207 Dihydrouridine synthase (Dus) EN12_01325 PF09583 Phage shock protein G (Phageshock_PspG) EN12_01340 PF00175 Oxidoreductase NAD-binding domain EN12_01340 PF00667 FAD binding domain EN12_01340 PF00258 Flavodoxin EN12_01345 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EN12_01345 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EN12_01350 PF01507 Phosphoadenosine phosphosulfate reductase family EN12_01385 PF00999 Sodium/hydrogen exchanger family EN12_01390 PF02607 B12 binding domain EN12_01390 PF00809 Pterin binding enzyme EN12_01390 PF02310 B12 binding domain EN12_01390 PF02965 Vitamin B12 dependent methionine synthase, activation domain EN12_01390 PF02574 Homocysteine S-methyltransferase EN12_01395 PF01842 ACT domain EN12_01395 PF00696 Amino acid kinase family EN12_01400 PF00266 Aminotransferase class-V EN12_01410 PF17755 UvrA DNA-binding domain EN12_01410 PF17760 UvrA interaction domain EN12_01410 PF00005 ABC transporter EN12_01415 PF00483 Nucleotidyl transferase EN12_01420 PF00196 Bacterial regulatory proteins, luxR family EN12_01425 PF00436 Single-strand binding protein family EN12_01430 PF17157 Gammaproteobacterial periplasmic sensor domain EN12_01430 PF00563 EAL domain EN12_01430 PF00990 Diguanylate cyclase, GGDEF domain EN12_01450 PF11741 AMIN domain EN12_01450 PF03958 Bacterial type II/III secretion system short domain EN12_01450 PF07660 Secretin and TonB N terminus short domain EN12_01450 PF00263 Bacterial type II and III secretion system protein EN12_01455 PF13401 AAA domain EN12_01455 PF01471 Putative peptidoglycan binding domain EN12_01465 PF00437 Type II/IV secretion system protein EN12_01470 PF00482 Type II secretion system (T2SS), protein F EN12_01480 PF00114 Pilin (bacterial filament) EN12_01480 PF07963 Prokaryotic N-terminal methylation motif EN12_01485 PF07963 Prokaryotic N-terminal methylation motif EN12_01485 PF00114 Pilin (bacterial filament) EN12_01520 PF04085 rod shape-determining protein MreC EN12_01525 PF04093 rod shape-determining protein MreD EN12_01530 PF02545 Maf-like protein EN12_01535 PF00575 S1 RNA binding domain EN12_01535 PF10150 Ribonuclease E/G family EN12_01540 PF13502 AsmA-like C-terminal region EN12_01540 PF13116 Protein of unknown function EN12_01545 PF00795 Carbon-nitrogen hydrolase EN12_01550 PF01523 Putative modulator of DNA gyrase EN12_01560 PF06877 Regulator of ribonuclease activity B EN12_01575 PF00582 Universal stress protein family EN12_01585 PF16868 NMT1-like family EN12_01590 PF01316 Arginine repressor, DNA binding domain EN12_01590 PF02863 Arginine repressor, C-terminal domain EN12_01595 PF00056 lactate/malate dehydrogenase, NAD binding domain EN12_01595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EN12_01600 PF13520 Amino acid permease EN12_01605 PF13520 Amino acid permease EN12_01610 PF00348 Polyprenyl synthetase EN12_01615 PF00829 Ribosomal prokaryotic L21 protein EN12_01620 PF01016 Ribosomal L27 protein EN12_01625 PF01018 GTP1/OBG EN12_01625 PF01926 50S ribosome-binding GTPase EN12_01630 PF06738 Putative threonine/serine exporter EN12_01635 PF12821 Threonine/Serine exporter, ThrE EN12_01640 PF00186 Dihydrofolate reductase EN12_01645 PF00149 Calcineurin-like phosphoesterase EN12_01650 PF04379 ApaG domain EN12_01655 PF00398 Ribosomal RNA adenine dimethylase EN12_01660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EN12_01665 PF09312 SurA N-terminal domain EN12_01670 PF03968 OstA-like protein EN12_01670 PF04453 LPS transport system D EN12_01675 PF05099 Tellurite resistance protein TerB EN12_01675 PF00226 DnaJ domain EN12_01705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_01705 PF00672 HAMP domain EN12_01705 PF12729 Four helix bundle sensory module for signal transduction EN12_01730 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EN12_01730 PF01464 Transglycosylase SLT domain EN12_01735 PF04362 Bacterial Fe(2+) trafficking EN12_01740 PF14815 NUDIX domain EN12_01740 PF00730 HhH-GPD superfamily base excision DNA repair protein EN12_01740 PF00633 Helix-hairpin-helix motif EN12_01740 PF10576 Iron-sulfur binding domain of endonuclease III EN12_01745 PF02390 Putative methyltransferase EN12_01750 PF04960 Glutaminase EN12_01755 PF04055 Radical SAM superfamily EN12_01755 PF06969 HemN C-terminal domain EN12_01760 PF01725 Ham1 family EN12_01770 PF02594 Uncharacterised ACR, YggU family COG1872 EN12_01775 PF02325 YGGT family EN12_01780 PF14748 Pyrroline-5-carboxylate reductase dimerisation EN12_01780 PF03807 NADP oxidoreductase coenzyme F420-dependent EN12_01785 PF01168 Alanine racemase, N-terminal domain EN12_01790 PF00437 Type II/IV secretion system protein EN12_01795 PF00437 Type II/IV secretion system protein EN12_01805 PF00579 tRNA synthetases class I (W and Y) EN12_01805 PF01479 S4 domain EN12_01810 PF03652 Holliday junction resolvase EN12_01815 PF02622 Uncharacterized ACR, COG1678 EN12_01820 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EN12_01820 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EN12_01825 PF04452 RNA methyltransferase EN12_01830 PF04231 Endonuclease I EN12_01835 PF10263 SprT-like family EN12_01835 PF17283 SprT-like zinc ribbon domain EN12_01840 PF00438 S-adenosylmethionine synthetase, N-terminal domain EN12_01840 PF02772 S-adenosylmethionine synthetase, central domain EN12_01840 PF02773 S-adenosylmethionine synthetase, C-terminal domain EN12_01850 PF02779 Transketolase, pyrimidine binding domain EN12_01850 PF02780 Transketolase, C-terminal domain EN12_01850 PF00456 Transketolase, thiamine diphosphate binding domain EN12_01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_01855 PF03466 LysR substrate binding domain EN12_01860 PF07715 TonB-dependent Receptor Plug Domain EN12_01860 PF00593 TonB dependent receptor EN12_01865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EN12_01865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EN12_01870 PF00162 Phosphoglycerate kinase EN12_01880 PF01116 Fructose-bisphosphate aldolase class-II EN12_01890 PF00924 Mechanosensitive ion channel EN12_01890 PF05552 Conserved TM helix EN12_01895 PF01810 LysE type translocator EN12_01900 PF03466 LysR substrate binding domain EN12_01900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_01905 PF04402 Protein of unknown function (DUF541) EN12_01910 PF00224 Pyruvate kinase, barrel domain EN12_01910 PF02887 Pyruvate kinase, alpha/beta domain EN12_01915 PF00455 DeoR C terminal sensor domain EN12_01915 PF08220 DeoR-like helix-turn-helix domain EN12_01920 PF01380 SIS domain EN12_01925 PF03480 Bacterial extracellular solute-binding protein, family 7 EN12_01965 PF00665 Integrase core domain EN12_01970 PF01527 Transposase EN12_01985 PF00114 Pilin (bacterial filament) EN12_01985 PF07963 Prokaryotic N-terminal methylation motif EN12_01990 PF01476 LysM domain EN12_01990 PF08525 Opacity-associated protein A N-terminal motif EN12_01990 PF01551 Peptidase family M23 EN12_02025 PF04002 RadC-like JAB domain EN12_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_02035 PF08447 PAS fold EN12_02040 PF12833 Helix-turn-helix domain EN12_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_02045 PF00672 HAMP domain EN12_02045 PF02743 Cache domain EN12_02050 PF00563 EAL domain EN12_02050 PF08668 HDOD domain EN12_02055 PF00589 Phage integrase family EN12_02055 PF13356 Arm DNA-binding domain EN12_02065 PF04539 Sigma-70 region 3 EN12_02065 PF04545 Sigma-70, region 4 EN12_02065 PF04546 Sigma-70, non-essential region EN12_02065 PF04542 Sigma-70 region 2 EN12_02065 PF00140 Sigma-70 factor, region 1.2 EN12_02065 PF03979 Sigma-70 factor, region 1.1 EN12_02070 PF10410 DnaB-helicase binding domain of primase EN12_02070 PF08275 DNA primase catalytic core, N-terminal domain EN12_02070 PF08278 DNA primase DnaG DnaB-binding EN12_02070 PF01807 CHC2 zinc finger EN12_02075 PF09424 Yqey-like protein EN12_02080 PF01165 Ribosomal protein S21 EN12_02085 PF00814 Glycoprotease family EN12_02090 PF00561 alpha/beta hydrolase fold EN12_02095 PF02660 Glycerol-3-phosphate acyltransferase EN12_02100 PF02152 Dihydroneopterin aldolase EN12_02105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EN12_02110 PF02673 Bacitracin resistance protein BacA EN12_02115 PF04977 Septum formation initiator EN12_02120 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EN12_02125 PF02542 YgbB family EN12_02130 PF01142 tRNA pseudouridine synthase D (TruD) EN12_02135 PF01975 Survival protein SurE EN12_02145 PF01476 LysM domain EN12_02145 PF01551 Peptidase family M23 EN12_02150 PF04545 Sigma-70, region 4 EN12_02150 PF04539 Sigma-70 region 3 EN12_02150 PF04542 Sigma-70 region 2 EN12_02150 PF00140 Sigma-70 factor, region 1.2 EN12_02155 PF05192 MutS domain III EN12_02155 PF05190 MutS family domain IV EN12_02155 PF00488 MutS domain V EN12_02155 PF05188 MutS domain II EN12_02155 PF01624 MutS domain I EN12_02160 PF00291 Pyridoxal-phosphate dependent enzyme EN12_02170 PF00528 Binding-protein-dependent transport system inner membrane component EN12_02175 PF00528 Binding-protein-dependent transport system inner membrane component EN12_02180 PF12857 TOBE-like domain EN12_02180 PF00005 ABC transporter EN12_02185 PF02464 Competence-damaged protein EN12_02190 PF00154 recA bacterial DNA recombination protein EN12_02195 PF02631 RecX family EN12_02200 PF01411 tRNA synthetases class II (A) EN12_02200 PF02272 DHHA1 domain EN12_02200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EN12_02210 PF02599 Global regulator protein family EN12_02260 PF04277 Oxaloacetate decarboxylase, gamma chain EN12_02265 PF00682 HMGL-like EN12_02265 PF00364 Biotin-requiring enzyme EN12_02265 PF02436 Conserved carboxylase domain EN12_02270 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EN12_02280 PF09335 SNARE associated Golgi protein EN12_02285 PF00675 Insulinase (Peptidase family M16) EN12_02285 PF05193 Peptidase M16 inactive domain EN12_02290 PF04262 Glutamate-cysteine ligase EN12_02295 PF02664 S-Ribosylhomocysteinase (LuxS) EN12_02300 PF00571 CBS domain EN12_02300 PF01595 Cyclin M transmembrane N-terminal domain EN12_02300 PF03471 Transporter associated domain EN12_02305 PF01578 Cytochrome C assembly protein EN12_02310 PF00448 SRP54-type protein, GTPase domain EN12_02310 PF02881 SRP54-type protein, helical bundle domain EN12_02310 PF02978 Signal peptide binding domain EN12_02315 PF00886 Ribosomal protein S16 EN12_02320 PF01782 RimM N-terminal domain EN12_02320 PF05239 PRC-barrel domain EN12_02325 PF01746 tRNA (Guanine-1)-methyltransferase EN12_02330 PF01245 Ribosomal protein L19 EN12_02335 PF13180 PDZ domain EN12_02340 PF00595 PDZ domain EN12_02350 PF03969 AFG1-like ATPase EN12_02355 PF00572 Ribosomal protein L13 EN12_02360 PF00380 Ribosomal protein S9/S16 EN12_02365 PF00355 Rieske [2Fe-2S] domain EN12_02365 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EN12_02370 PF00032 Cytochrome b(C-terminal)/b6/petD EN12_02370 PF00033 Cytochrome b/b6/petB EN12_02375 PF02167 Cytochrome C1 family EN12_02380 PF00043 Glutathione S-transferase, C-terminal domain EN12_02380 PF02798 Glutathione S-transferase, N-terminal domain EN12_02385 PF04386 Stringent starvation protein B EN12_02390 PF04972 BON domain EN12_02395 PF13580 SIS domain EN12_02400 PF02021 Uncharacterised protein family UPF0102 EN12_02405 PF04348 LppC putative lipoprotein EN12_02410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EN12_02415 PF00440 Bacterial regulatory proteins, tetR family EN12_02420 PF00156 Phosphoribosyl transferase domain EN12_02425 PF00484 Carbonic anhydrase EN12_02430 PF01740 STAS domain EN12_02430 PF00916 Sulfate permease family EN12_02440 PF00005 ABC transporter EN12_02445 PF01061 ABC-2 type transporter EN12_02450 PF02569 Pantoate-beta-alanine ligase EN12_02455 PF02548 Ketopantoate hydroxymethyltransferase EN12_02460 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EN12_02465 PF12626 Polymerase A arginine-rich C-terminus EN12_02465 PF12627 Probable RNA and SrmB- binding site of polymerase A EN12_02465 PF01743 Poly A polymerase head domain EN12_02470 PF00749 tRNA synthetases class I (E and Q), catalytic domain EN12_02475 PF01258 Prokaryotic dksA/traR C4-type zinc finger EN12_02480 PF17746 SfsA N-terminal OB domain EN12_02480 PF03749 Sugar fermentation stimulation protein RE domain EN12_02490 PF00270 DEAD/DEAH box helicase EN12_02490 PF04408 Helicase associated domain (HA2) EN12_02490 PF00271 Helicase conserved C-terminal domain EN12_02490 PF08482 ATP-dependent helicase C-terminal EN12_02495 PF00912 Transglycosylase EN12_02495 PF00905 Penicillin binding protein transpeptidase domain EN12_02495 PF14814 Bifunctional transglycosylase second domain EN12_02500 PF01734 Patatin-like phospholipase EN12_02505 PF11791 Aconitate B N-terminal domain EN12_02505 PF06434 Aconitate hydratase 2 N-terminus EN12_02505 PF00330 Aconitase family (aconitate hydratase) EN12_02510 PF06062 Uncharacterised protein family (UPF0231) EN12_02515 PF00543 Nitrogen regulatory protein P-II EN12_02520 PF00909 Ammonium Transporter Family EN12_02525 PF13416 Bacterial extracellular solute-binding protein EN12_02535 PF08402 TOBE domain EN12_02535 PF00005 ABC transporter EN12_02540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EN12_02540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EN12_02540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EN12_02540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EN12_02545 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EN12_02545 PF06165 Glycosyltransferase family 36 EN12_02550 PF00728 Glycosyl hydrolase family 20, catalytic domain EN12_02550 PF02838 Glycosyl hydrolase family 20, domain 2 EN12_02555 PF01869 BadF/BadG/BcrA/BcrD ATPase family EN12_02565 PF00005 ABC transporter EN12_02565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_02570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_02570 PF00005 ABC transporter EN12_02575 PF12911 N-terminal TM domain of oligopeptide transport permease C EN12_02575 PF00528 Binding-protein-dependent transport system inner membrane component EN12_02580 PF00528 Binding-protein-dependent transport system inner membrane component EN12_02585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EN12_02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_02590 PF00512 His Kinase A (phospho-acceptor) domain EN12_02590 PF09308 LuxQ, periplasmic EN12_02590 PF00072 Response regulator receiver domain EN12_02595 PF05175 Methyltransferase small domain EN12_02595 PF08468 Methyltransferase small domain N-terminal EN12_02600 PF01594 AI-2E family transporter EN12_02605 PF00202 Aminotransferase class-III EN12_02615 PF01521 Iron-sulphur cluster biosynthesis EN12_02625 PF00873 AcrB/AcrD/AcrF family EN12_02630 PF01551 Peptidase family M23 EN12_02630 PF04225 Opacity-associated protein A LysM-like domain EN12_02635 PF00579 tRNA synthetases class I (W and Y) EN12_02635 PF01479 S4 domain EN12_02640 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EN12_02645 PF13609 Gram-negative porin EN12_02650 PF01272 Transcription elongation factor, GreA/GreB, C-term EN12_02650 PF03449 Transcription elongation factor, N-terminal EN12_02655 PF01985 CRS1 / YhbY (CRM) domain EN12_02660 PF01728 FtsJ-like methyltransferase EN12_02665 PF01434 Peptidase family M41 EN12_02665 PF17862 AAA+ lid domain EN12_02665 PF00004 ATPase family associated with various cellular activities (AAA) EN12_02665 PF06480 FtsH Extracellular EN12_02670 PF00809 Pterin binding enzyme EN12_02675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EN12_02675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EN12_02675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EN12_02675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EN12_02680 PF03840 Preprotein translocase SecG subunit EN12_02695 PF17384 RimP C-terminal SH3 domain EN12_02695 PF02576 RimP N-terminal domain EN12_02700 PF13184 NusA-like KH domain EN12_02700 PF08529 NusA N-terminal domain EN12_02700 PF00575 S1 RNA binding domain EN12_02705 PF04760 Translation initiation factor IF-2, N-terminal region EN12_02705 PF08364 Bacterial translation initiation factor IF-2 associated region EN12_02705 PF00009 Elongation factor Tu GTP binding domain EN12_02705 PF11987 Translation-initiation factor 2 EN12_02710 PF02033 Ribosome-binding factor A EN12_02715 PF01509 TruB family pseudouridylate synthase (N terminal domain) EN12_02715 PF16198 tRNA pseudouridylate synthase B C-terminal domain EN12_02715 PF09157 Pseudouridine synthase II TruB, C-terminal EN12_02720 PF00312 Ribosomal protein S15 EN12_02725 PF01138 3' exoribonuclease family, domain 1 EN12_02725 PF03725 3' exoribonuclease family, domain 2 EN12_02725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EN12_02725 PF00013 KH domain EN12_02725 PF00575 S1 RNA binding domain EN12_02730 PF13181 Tetratricopeptide repeat EN12_02730 PF07719 Tetratricopeptide repeat EN12_02755 PF00990 Diguanylate cyclase, GGDEF domain EN12_02755 PF00563 EAL domain EN12_02755 PF03707 Bacterial signalling protein N terminal repeat EN12_02765 PF13508 Acetyltransferase (GNAT) domain EN12_02780 PF00563 EAL domain EN12_02780 PF03707 Bacterial signalling protein N terminal repeat EN12_02780 PF00990 Diguanylate cyclase, GGDEF domain EN12_02815 PF11799 impB/mucB/samB family C-terminal domain EN12_02815 PF13438 Domain of unknown function (DUF4113) EN12_02815 PF00817 impB/mucB/samB family EN12_02820 PF13700 Domain of unknown function (DUF4158) EN12_02820 PF01526 Tn3 transposase DDE domain EN12_02830 PF01526 Tn3 transposase DDE domain EN12_02830 PF13700 Domain of unknown function (DUF4158) EN12_02840 PF01636 Phosphotransferase enzyme family EN12_02875 PF07690 Major Facilitator Superfamily EN12_02880 PF02909 Tetracyclin repressor-like, C-terminal domain EN12_02880 PF00440 Bacterial regulatory proteins, tetR family EN12_02895 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase EN12_02900 PF01636 Phosphotransferase enzyme family EN12_02905 PF00809 Pterin binding enzyme EN12_02915 PF13438 Domain of unknown function (DUF4113) EN12_02915 PF00817 impB/mucB/samB family EN12_02915 PF11799 impB/mucB/samB family C-terminal domain EN12_02920 PF00717 Peptidase S24-like EN12_02930 PF02811 PHP domain EN12_02930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EN12_02930 PF07733 Bacterial DNA polymerase III alpha NTPase domain EN12_02930 PF11490 DNA polymerase III polC-type N-terminus II EN12_02930 PF00929 Exonuclease EN12_02930 PF14579 Helix-hairpin-helix motif EN12_02945 PF02384 N-6 DNA Methylase EN12_02960 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EN12_02960 PF18766 SWI2/SNF2 ATPase EN12_02960 PF11867 Domain of unknown function (DUF3387) EN12_02965 PF12102 Domain of unknown function (DUF3578) EN12_02965 PF07728 AAA domain (dynein-related subfamily) EN12_03010 PF00665 Integrase core domain EN12_03030 PF01695 IstB-like ATP binding protein EN12_03080 PF10411 Disulfide bond isomerase protein N-terminus EN12_03080 PF13098 Thioredoxin-like domain EN12_03095 PF10502 Signal peptidase, peptidase S26 EN12_03105 PF06834 TraU protein EN12_03110 PF06986 Type-1V conjugative transfer system mating pair stabilisation EN12_03135 PF00436 Single-strand binding protein family EN12_03155 PF08406 CbbQ/NirQ/NorQ C-terminal EN12_03155 PF07728 AAA domain (dynein-related subfamily) EN12_03175 PF00092 von Willebrand factor type A domain EN12_03180 PF04002 RadC-like JAB domain EN12_03205 PF12833 Helix-turn-helix domain EN12_03225 PF00186 Dihydrofolate reductase EN12_03230 PF00589 Phage integrase family EN12_03230 PF13495 Phage integrase, N-terminal SAM-like domain EN12_03240 PF06122 Conjugative relaxosome accessory transposon protein EN12_03285 PF00717 Peptidase S24-like EN12_03285 PF01381 Helix-turn-helix EN12_03290 PF16658 Class II release factor RF3, C-terminal domain EN12_03290 PF00009 Elongation factor Tu GTP binding domain EN12_03290 PF03144 Elongation factor Tu domain 2 EN12_03295 PF00270 DEAD/DEAH box helicase EN12_03295 PF00271 Helicase conserved C-terminal domain EN12_03300 PF05175 Methyltransferase small domain EN12_03305 PF05525 Branched-chain amino acid transport protein EN12_03310 PF00472 RF-1 domain EN12_03310 PF03462 PCRF domain EN12_03315 PF00152 tRNA synthetases class II (D, K and N) EN12_03315 PF01336 OB-fold nucleic acid binding domain EN12_03320 PF02954 Bacterial regulatory protein, Fis family EN12_03320 PF00072 Response regulator receiver domain EN12_03320 PF00158 Sigma-54 interaction domain EN12_03330 PF00248 Aldo/keto reductase family EN12_03335 PF02976 DNA mismatch repair enzyme MutH EN12_03345 PF00293 NUDIX domain EN12_03350 PF02896 PEP-utilising enzyme, TIM barrel domain EN12_03350 PF00391 PEP-utilising enzyme, mobile domain EN12_03350 PF01590 GAF domain EN12_03350 PF05524 PEP-utilising enzyme, N-terminal EN12_03355 PF01925 Sulfite exporter TauE/SafE EN12_03360 PF01790 Prolipoprotein diacylglyceryl transferase EN12_03365 PF00303 Thymidylate synthase EN12_03370 PF02690 Na+/Pi-cotransporter EN12_03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_03375 PF03466 LysR substrate binding domain EN12_03380 PF01022 Bacterial regulatory protein, arsR family EN12_03385 PF01649 Ribosomal protein S20 EN12_03390 PF03023 Lipid II flippase MurJ EN12_03395 PF01687 Riboflavin kinase EN12_03395 PF06574 FAD synthetase EN12_03400 PF00133 tRNA synthetases class I (I, L, M and V) EN12_03400 PF06827 Zinc finger found in FPG and IleRS EN12_03400 PF08264 Anticodon-binding domain of tRNA EN12_03405 PF01252 Signal peptidase (SPase) II EN12_03410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EN12_03415 PF02401 LytB protein EN12_03420 PF02554 Carbon starvation protein CstA EN12_03435 PF13580 SIS domain EN12_03440 PF03702 Anhydro-N-acetylmuramic acid kinase EN12_03445 PF00933 Glycosyl hydrolase family 3 N terminal domain EN12_03450 PF00072 Response regulator receiver domain EN12_03450 PF04397 LytTr DNA-binding domain EN12_03455 PF06580 Histidine kinase EN12_03455 PF07694 5TMR of 5TMR-LYT EN12_03460 PF00793 DAHP synthetase I family EN12_03465 PF01817 Chorismate mutase type II EN12_03465 PF02153 Prephenate dehydrogenase EN12_03470 PF07238 PilZ domain EN12_03475 PF00005 ABC transporter EN12_03475 PF12848 ABC transporter EN12_03480 PF01464 Transglycosylase SLT domain EN12_03480 PF14718 Soluble lytic murein transglycosylase L domain EN12_03485 PF01371 Trp repressor protein EN12_03490 PF01931 Protein of unknown function DUF84 EN12_03495 PF00563 EAL domain EN12_03495 PF00990 Diguanylate cyclase, GGDEF domain EN12_03500 PF13416 Bacterial extracellular solute-binding protein EN12_03505 PF00800 Prephenate dehydratase EN12_03505 PF01817 Chorismate mutase type II EN12_03510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EN12_03515 PF13525 Outer membrane lipoprotein EN12_03520 PF00849 RNA pseudouridylate synthase EN12_03520 PF01479 S4 domain EN12_03530 PF17871 AAA lid domain EN12_03530 PF10431 C-terminal, D2-small domain, of ClpB protein EN12_03530 PF02861 Clp amino terminal domain, pathogenicity island component EN12_03530 PF07724 AAA domain (Cdc48 subfamily) EN12_03530 PF00004 ATPase family associated with various cellular activities (AAA) EN12_03565 PF00881 Nitroreductase family EN12_03570 PF00037 4Fe-4S binding domain EN12_03580 PF04381 Putative exonuclease, RdgC EN12_03585 PF00072 Response regulator receiver domain EN12_03585 PF00486 Transcriptional regulatory protein, C terminal EN12_03590 PF00512 His Kinase A (phospho-acceptor) domain EN12_03590 PF11808 Phosphate regulon sensor protein PhoR EN12_03590 PF00989 PAS fold EN12_03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_03595 PF12849 PBP superfamily domain EN12_03600 PF02541 Ppx/GppA phosphatase family EN12_03605 PF13090 Polyphosphate kinase C-terminal domain 2 EN12_03605 PF02503 Polyphosphate kinase middle domain EN12_03605 PF17941 Polyphosphate kinase C-terminal domain 1 EN12_03605 PF13089 Polyphosphate kinase N-terminal domain EN12_03610 PF00528 Binding-protein-dependent transport system inner membrane component EN12_03615 PF00528 Binding-protein-dependent transport system inner membrane component EN12_03620 PF00005 ABC transporter EN12_03625 PF01895 PhoU domain EN12_03630 PF03976 Polyphosphate kinase 2 (PPK2) EN12_03635 PF03932 CutC family EN12_03640 PF00578 AhpC/TSA family EN12_03640 PF10417 C-terminal domain of 1-Cys peroxiredoxin EN12_03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_03645 PF03466 LysR substrate binding domain EN12_03650 PF01274 Malate synthase EN12_03655 PF00463 Isocitrate lyase family EN12_03660 PF00571 CBS domain EN12_03665 PF02547 Queuosine biosynthesis protein EN12_03670 PF01702 Queuine tRNA-ribosyltransferase EN12_03675 PF02699 Preprotein translocase subunit EN12_03680 PF07549 SecD/SecF GG Motif EN12_03680 PF13721 SecD export protein N-terminal TM region EN12_03680 PF02355 Protein export membrane protein EN12_03685 PF07549 SecD/SecF GG Motif EN12_03685 PF02355 Protein export membrane protein EN12_03690 PF00459 Inositol monophosphatase family EN12_03695 PF00588 SpoU rRNA Methylase family EN12_03700 PF02082 Transcriptional regulator EN12_03705 PF00266 Aminotransferase class-V EN12_03710 PF01592 NifU-like N terminal domain EN12_03715 PF01521 Iron-sulphur cluster biosynthesis EN12_03720 PF07743 HSCB C-terminal oligomerisation domain EN12_03720 PF00226 DnaJ domain EN12_03725 PF00012 Hsp70 protein EN12_03730 PF00111 2Fe-2S iron-sulfur cluster binding domain EN12_03735 PF04384 Iron-sulphur cluster assembly EN12_03740 PF12404 Peptidase EN12_03740 PF00883 Cytosol aminopeptidase family, catalytic domain EN12_03745 PF00334 Nucleoside diphosphate kinase EN12_03750 PF04055 Radical SAM superfamily EN12_03755 PF13464 Domain of unknown function (DUF4115) EN12_03760 PF04551 GcpE protein EN12_03765 PF13393 Histidyl-tRNA synthetase EN12_03765 PF03129 Anticodon binding domain EN12_03770 PF09976 Tetratricopeptide repeat-like domain EN12_03775 PF13360 PQQ-like domain EN12_03780 PF01926 50S ribosome-binding GTPase EN12_03780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EN12_03795 PF02601 Exonuclease VII, large subunit EN12_03795 PF13742 OB-fold nucleic acid binding domain EN12_03800 PF00571 CBS domain EN12_03800 PF00478 IMP dehydrogenase / GMP reductase domain EN12_03805 PF00958 GMP synthase C terminal domain EN12_03805 PF00117 Glutamine amidotransferase class-I EN12_03805 PF02540 NAD synthase EN12_03810 PF06483 Chitinase C EN12_03810 PF00704 Glycosyl hydrolases family 18 EN12_03815 PF01184 GPR1/FUN34/yaaH family EN12_03820 PF00550 Phosphopantetheine attachment site EN12_03820 PF00857 Isochorismatase family EN12_03825 PF13193 AMP-binding enzyme C-terminal domain EN12_03825 PF00501 AMP-binding enzyme EN12_03830 PF00425 chorismate binding enzyme EN12_03845 PF01497 Periplasmic binding protein EN12_03850 PF01032 FecCD transport family EN12_03855 PF01032 FecCD transport family EN12_03860 PF00005 ABC transporter EN12_03865 PF01648 4'-phosphopantetheinyl transferase superfamily EN12_03865 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EN12_03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_03870 PF03466 LysR substrate binding domain EN12_03875 PF14863 Alkyl sulfatase dimerisation EN12_03875 PF14864 Alkyl sulfatase C-terminal EN12_03875 PF00753 Metallo-beta-lactamase superfamily EN12_03880 PF01235 Sodium:alanine symporter family EN12_03885 PF01266 FAD dependent oxidoreductase EN12_03890 PF03466 LysR substrate binding domain EN12_03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_03905 PF12431 Transcriptional regulator EN12_03905 PF00072 Response regulator receiver domain EN12_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_03910 PF17203 Single cache domain 3 EN12_03915 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EN12_03920 PF00364 Biotin-requiring enzyme EN12_03920 PF02436 Conserved carboxylase domain EN12_03920 PF00682 HMGL-like EN12_03925 PF04277 Oxaloacetate decarboxylase, gamma chain EN12_03930 PF03390 2-hydroxycarboxylate transporter family EN12_03935 PF08218 Citrate lyase ligase C-terminal domain EN12_03940 PF06857 Malonate decarboxylase delta subunit (MdcD) EN12_03945 PF03328 HpcH/HpaI aldolase/citrate lyase family EN12_03950 PF04223 Citrate lyase, alpha subunit (CitF) EN12_03955 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase EN12_03960 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EN12_03970 PF08032 RNA 2'-O ribose methyltransferase substrate binding EN12_03970 PF00588 SpoU rRNA Methylase family EN12_03975 PF11953 Domain of unknown function (DUF3470) EN12_03975 PF00037 4Fe-4S binding domain EN12_04030 PF13737 Transposase DDE domain EN12_04040 PF00171 Aldehyde dehydrogenase family EN12_04045 PF12561 ToxR activated gene A lipoprotein domain EN12_04045 PF00041 Fibronectin type III domain EN12_04060 PF08534 Redoxin EN12_04065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_04070 PF00486 Transcriptional regulatory protein, C terminal EN12_04080 PF07963 Prokaryotic N-terminal methylation motif EN12_04080 PF05946 Toxin-coregulated pilus subunit TcpA EN12_04090 PF10671 Toxin co-regulated pilus biosynthesis protein Q EN12_04110 PF17456 Toxin-coregulated pilus protein S EN12_04115 PF00437 Type II/IV secretion system protein EN12_04120 PF00482 Type II secretion system (T2SS), protein F EN12_04125 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F EN12_04130 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family EN12_04135 PF06750 Bacterial Peptidase A24 N-terminal domain EN12_04135 PF01478 Type IV leader peptidase family EN12_04140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_04140 PF00672 HAMP domain EN12_04140 PF02743 Cache domain EN12_04155 PF04225 Opacity-associated protein A LysM-like domain EN12_04155 PF01551 Peptidase family M23 EN12_04165 PF13322 Domain of unknown function (DUF4092) EN12_04165 PF13402 Peptidase M60, enhancin and enhancin-like EN12_04165 PF17291 N-terminal domain of M60-like peptidases EN12_04175 PF00589 Phage integrase family EN12_04175 PF13356 Arm DNA-binding domain EN12_04180 PF01668 SmpB protein EN12_04185 PF03364 Polyketide cyclase / dehydrase and lipid transport EN12_04190 PF03658 RnfH family Ubiquitin EN12_04195 PF04355 SmpA / OmlA family EN12_04200 PF02463 RecF/RecN/SMC N terminal domain EN12_04205 PF01513 ATP-NAD kinase EN12_04210 PF01025 GrpE EN12_04215 PF00012 Hsp70 protein EN12_04220 PF00684 DnaJ central domain EN12_04220 PF01556 DnaJ C terminal domain EN12_04220 PF00226 DnaJ domain EN12_04225 PF00114 Pilin (bacterial filament) EN12_04225 PF07963 Prokaryotic N-terminal methylation motif EN12_04250 PF03806 AbgT putative transporter family EN12_04255 PF14437 MafB19-like deaminase EN12_04265 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_04265 PF01464 Transglycosylase SLT domain EN12_04275 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EN12_04275 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EN12_04275 PF02769 AIR synthase related protein, C-terminal domain EN12_04280 PF01797 Transposase IS200 like EN12_04290 PF06786 Uncharacterised protein family (UPF0253) EN12_04300 PF03129 Anticodon binding domain EN12_04300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EN12_04300 PF04073 Aminoacyl-tRNA editing domain EN12_04305 PF01980 tRNA-methyltransferase O EN12_04305 PF18389 TrmO C-terminal domain EN12_04310 PF01197 Ribosomal protein L31 EN12_04315 PF00444 Ribosomal protein L36 EN12_04320 PF03806 AbgT putative transporter family EN12_04325 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EN12_04335 PF13302 Acetyltransferase (GNAT) domain EN12_04350 PF04287 tRNA pseudouridine synthase C EN12_04355 PF00849 RNA pseudouridylate synthase EN12_04360 PF02780 Transketolase, C-terminal domain EN12_04360 PF02779 Transketolase, pyrimidine binding domain EN12_04360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EN12_04365 PF00348 Polyprenyl synthetase EN12_04370 PF02609 Exonuclease VII small subunit EN12_04375 PF01618 MotA/TolQ/ExbB proton channel family EN12_04385 PF02926 THUMP domain EN12_04385 PF02568 Thiamine biosynthesis protein (ThiI) EN12_04390 PF03466 LysR substrate binding domain EN12_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_04395 PF04241 Protein of unknown function (DUF423) EN12_04400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EN12_04400 PF01367 5'-3' exonuclease, C-terminal SAM fold EN12_04405 PF03641 Possible lysine decarboxylase EN12_04405 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EN12_04405 PF11892 Domain of unknown function (DUF3412) EN12_04410 PF00990 Diguanylate cyclase, GGDEF domain EN12_04420 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EN12_04420 PF14489 QueF-like protein EN12_04425 PF07348 Syd protein (SUKH-2) EN12_04430 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) EN12_04435 PF03180 NLPA lipoprotein EN12_04440 PF00528 Binding-protein-dependent transport system inner membrane component EN12_04445 PF09383 NIL domain EN12_04445 PF00005 ABC transporter EN12_04455 PF00356 Bacterial regulatory proteins, lacI family EN12_04460 PF02378 Phosphotransferase system, EIIC EN12_04460 PF00367 phosphotransferase system, EIIB EN12_04465 PF16657 Maltogenic Amylase, C-terminal domain EN12_04465 PF00128 Alpha amylase, catalytic domain EN12_04490 PF13533 Biotin-lipoyl like EN12_04495 PF00873 AcrB/AcrD/AcrF family EN12_04500 PF01451 Low molecular weight phosphotyrosine protein phosphatase EN12_04505 PF02350 UDP-N-acetylglucosamine 2-epimerase EN12_04510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EN12_04510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EN12_04510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EN12_04515 PF12464 Maltose acetyltransferase EN12_04515 PF14602 Hexapeptide repeat of succinyl-transferase EN12_04535 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_04545 PF00534 Glycosyl transferases group 1 EN12_04545 PF00862 Sucrose synthase EN12_04555 PF03808 Glycosyl transferase WecB/TagA/CpsF family EN12_04570 PF17945 Beta/Gamma crystallin EN12_04570 PF12561 ToxR activated gene A lipoprotein domain EN12_04585 PF02397 Bacterial sugar transferase EN12_04595 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EN12_04595 PF10531 SLBB domain EN12_04595 PF02563 Polysaccharide biosynthesis/export protein EN12_04600 PF13807 G-rich domain on putative tyrosine kinase EN12_04600 PF13614 AAA domain EN12_04600 PF02706 Chain length determinant protein EN12_04620 PF00464 Serine hydroxymethyltransferase EN12_04630 PF04055 Radical SAM superfamily EN12_04630 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EN12_04635 PF03099 Biotin/lipoate A/B protein ligase family EN12_04640 PF04359 Protein of unknown function (DUF493) EN12_04645 PF07943 Penicillin-binding protein 5, C-terminal domain EN12_04645 PF00768 D-alanyl-D-alanine carboxypeptidase EN12_04650 PF03330 Lytic transglycolase EN12_04650 PF05036 Sporulation related domain EN12_04655 PF01098 Cell cycle protein EN12_04660 PF00905 Penicillin binding protein transpeptidase domain EN12_04660 PF03717 Penicillin-binding Protein dimerisation domain EN12_04665 PF02590 Predicted SPOUT methyltransferase EN12_04675 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EN12_04675 PF06144 DNA polymerase III, delta subunit EN12_04680 PF04390 Lipopolysaccharide-assembly EN12_04685 PF00133 tRNA synthetases class I (I, L, M and V) EN12_04685 PF13603 Leucyl-tRNA synthetase, Domain 2 EN12_04685 PF08264 Anticodon-binding domain of tRNA EN12_04690 PF07295 Zinc-ribbon containing domain EN12_04695 PF00795 Carbon-nitrogen hydrolase EN12_04700 PF03471 Transporter associated domain EN12_04700 PF00571 CBS domain EN12_04705 PF02130 Uncharacterized protein family UPF0054 EN12_04710 PF02562 PhoH-like protein EN12_04715 PF04055 Radical SAM superfamily EN12_04715 PF01938 TRAM domain EN12_04715 PF00919 Uncharacterized protein family UPF0004 EN12_04720 PF01494 FAD binding domain EN12_04725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EN12_04730 PF05524 PEP-utilising enzyme, N-terminal EN12_04730 PF02896 PEP-utilising enzyme, TIM barrel domain EN12_04730 PF00391 PEP-utilising enzyme, mobile domain EN12_04735 PF00381 PTS HPr component phosphorylation site EN12_04740 PF00291 Pyridoxal-phosphate dependent enzyme EN12_04750 PF04354 ZipA, C-terminal FtsZ-binding domain EN12_04755 PF00533 BRCA1 C Terminus (BRCT) domain EN12_04755 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EN12_04755 PF03120 NAD-dependent DNA ligase OB-fold domain EN12_04755 PF01653 NAD-dependent DNA ligase adenylation domain EN12_04755 PF12826 Helix-hairpin-helix motif EN12_04760 PF13609 Gram-negative porin EN12_04770 PF13411 MerR HTH family regulatory protein EN12_04775 PF01957 NfeD-like C-terminal, partner-binding EN12_04780 PF01145 SPFH domain / Band 7 family EN12_04780 PF16200 C-terminal region of band_7 EN12_04785 PF00085 Thioredoxin EN12_04795 PF00106 short chain dehydrogenase EN12_04800 PF08338 Domain of unknown function (DUF1731) EN12_04800 PF01370 NAD dependent epimerase/dehydratase family EN12_04805 PF12850 Calcineurin-like phosphoesterase superfamily domain EN12_04815 PF17323 Trans-membrane regulatory protein ToxS EN12_04820 PF00486 Transcriptional regulatory protein, C terminal EN12_04825 PF00183 Hsp90 protein EN12_04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_04830 PF05191 Adenylate kinase, active site lid EN12_04835 PF00762 Ferrochelatase EN12_04840 PF00854 POT family EN12_04845 PF02357 Transcription termination factor nusG EN12_04850 PF00733 Asparagine synthase EN12_04850 PF13537 Glutamine amidotransferase domain EN12_04855 PF00999 Sodium/hydrogen exchanger family EN12_04855 PF02254 TrkA-N domain EN12_04860 PF01047 MarR family EN12_04860 PF00480 ROK family EN12_04865 PF01979 Amidohydrolase family EN12_04870 PF02378 Phosphotransferase system, EIIC EN12_04870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EN12_04870 PF00367 phosphotransferase system, EIIB EN12_04875 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EN12_04875 PF00749 tRNA synthetases class I (E and Q), catalytic domain EN12_04885 PF01416 tRNA pseudouridine synthase EN12_04890 PF01039 Carboxyl transferase domain EN12_04890 PF17848 Acetyl-coA carboxylase zinc finger domain EN12_04895 PF02875 Mur ligase family, glutamate ligase domain EN12_04895 PF08245 Mur ligase middle domain EN12_04900 PF05036 Sporulation related domain EN12_04905 PF02674 Colicin V production protein EN12_04910 PF00156 Phosphoribosyl transferase domain EN12_04915 PF13726 Na+-H+ antiporter family EN12_04915 PF03553 Na+/H+ antiporter family EN12_04920 PF00929 Exonuclease EN12_04930 PF00691 OmpA family EN12_04930 PF18393 MotY N-terminal domain EN12_04935 PF10952 Protein of unknown function (DUF2753) EN12_04940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_04945 PF10576 Iron-sulfur binding domain of endonuclease III EN12_04945 PF00633 Helix-hairpin-helix motif EN12_04945 PF00730 HhH-GPD superfamily base excision DNA repair protein EN12_04950 PF02508 Rnf-Nqr subunit, membrane protein EN12_04955 PF04205 FMN-binding domain EN12_04960 PF03116 NQR2, RnfD, RnfE family EN12_04965 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EN12_04965 PF12838 4Fe-4S dicluster domain EN12_04965 PF13375 RnfC Barrel sandwich hybrid domain EN12_04965 PF10531 SLBB domain EN12_04970 PF04060 Putative Fe-S cluster EN12_04975 PF02508 Rnf-Nqr subunit, membrane protein EN12_04990 PF00271 Helicase conserved C-terminal domain EN12_04990 PF12344 Ultra-violet resistance protein B EN12_04990 PF17757 UvrB interaction domain EN12_04990 PF02151 UvrB/uvrC motif EN12_04990 PF04851 Type III restriction enzyme, res subunit EN12_05000 PF02954 Bacterial regulatory protein, Fis family EN12_05000 PF00072 Response regulator receiver domain EN12_05000 PF00158 Sigma-54 interaction domain EN12_05005 PF01627 Hpt domain EN12_05010 PF01933 Uncharacterised protein family UPF0052 EN12_05015 PF04055 Radical SAM superfamily EN12_05015 PF06463 Molybdenum Cofactor Synthesis C EN12_05020 PF00994 Probable molybdopterin binding domain EN12_05025 PF01967 MoaC family EN12_05030 PF02597 ThiS family EN12_05035 PF02391 MoaE protein EN12_05040 PF07694 5TMR of 5TMR-LYT EN12_05040 PF00990 Diguanylate cyclase, GGDEF domain EN12_05045 PF00571 CBS domain EN12_05045 PF07085 DRTGG domain EN12_05045 PF00392 Bacterial regulatory proteins, gntR family EN12_05045 PF03061 Thioesterase superfamily EN12_05050 PF00403 Heavy-metal-associated domain EN12_05055 PF01048 Phosphorylase superfamily EN12_05065 PF01588 Putative tRNA binding domain EN12_05065 PF09334 tRNA synthetases class I (M) EN12_05070 PF10609 NUBPL iron-transfer P-loop NTPase EN12_05080 PF00485 Phosphoribulokinase / Uridine kinase family EN12_05085 PF05170 AsmA family EN12_05090 PF12557 Cob(I)alamin adenosyltransferase N terminal EN12_05090 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EN12_05095 PF01451 Low molecular weight phosphotyrosine protein phosphatase EN12_05100 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EN12_05105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EN12_05115 PF04542 Sigma-70 region 2 EN12_05115 PF08281 Sigma-70, region 4 EN12_05130 PF02803 Thiolase, C-terminal domain EN12_05130 PF00108 Thiolase, N-terminal domain EN12_05135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EN12_05135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EN12_05135 PF00378 Enoyl-CoA hydratase/isomerase EN12_05140 PF00881 Nitroreductase family EN12_05145 PF03466 LysR substrate binding domain EN12_05145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_05150 PF00072 Response regulator receiver domain EN12_05160 PF04304 Protein of unknown function (DUF454) EN12_05165 PF00156 Phosphoribosyl transferase domain EN12_05170 PF12170 DNA polymerase III tau subunit V interacting with alpha EN12_05170 PF12169 DNA polymerase III subunits gamma and tau domain III EN12_05170 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EN12_05175 PF02575 YbaB/EbfC DNA-binding family EN12_05180 PF13662 Toprim domain EN12_05180 PF02132 RecR protein EN12_05185 PF03692 Putative zinc- or iron-chelating domain EN12_05190 PF03692 Putative zinc- or iron-chelating domain EN12_05195 PF00106 short chain dehydrogenase EN12_05200 PF01343 Peptidase family S49 EN12_05200 PF08496 Peptidase family S49 N-terminal EN12_05205 PF00291 Pyridoxal-phosphate dependent enzyme EN12_05210 PF01037 Lrp/AsnC ligand binding domain EN12_05210 PF13404 AsnC-type helix-turn-helix domain EN12_05225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EN12_05235 PF08448 PAS fold EN12_05235 PF00990 Diguanylate cyclase, GGDEF domain EN12_05240 PF01022 Bacterial regulatory protein, arsR family EN12_05245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EN12_05245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EN12_05260 PF00704 Glycosyl hydrolases family 18 EN12_05260 PF06483 Chitinase C EN12_05270 PF01161 Phosphatidylethanolamine-binding protein EN12_05290 PF03481 Putative GTP-binding controlling metal-binding EN12_05290 PF01300 Telomere recombination EN12_05305 PF00072 Response regulator receiver domain EN12_05315 PF00989 PAS fold EN12_05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_05315 PF00512 His Kinase A (phospho-acceptor) domain EN12_05315 PF13188 PAS domain EN12_05315 PF13426 PAS domain EN12_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_05320 PF00512 His Kinase A (phospho-acceptor) domain EN12_05325 PF00563 EAL domain EN12_05325 PF13188 PAS domain EN12_05325 PF00990 Diguanylate cyclase, GGDEF domain EN12_05325 PF03707 Bacterial signalling protein N terminal repeat EN12_05330 PF00072 Response regulator receiver domain EN12_05330 PF00158 Sigma-54 interaction domain EN12_05330 PF02954 Bacterial regulatory protein, Fis family EN12_05335 PF13188 PAS domain EN12_05335 PF00072 Response regulator receiver domain EN12_05335 PF08448 PAS fold EN12_05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_05335 PF00512 His Kinase A (phospho-acceptor) domain EN12_05345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EN12_05350 PF00528 Binding-protein-dependent transport system inner membrane component EN12_05355 PF12911 N-terminal TM domain of oligopeptide transport permease C EN12_05355 PF00528 Binding-protein-dependent transport system inner membrane component EN12_05360 PF00005 ABC transporter EN12_05360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_05365 PF00005 ABC transporter EN12_05365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_05370 PF13409 Glutathione S-transferase, N-terminal domain EN12_05375 PF07085 DRTGG domain EN12_05375 PF01515 Phosphate acetyl/butaryl transferase EN12_05380 PF00871 Acetokinase family EN12_05385 PF04217 Protein of unknown function, DUF412 EN12_05390 PF09905 DNA-binding protein VF530 EN12_05400 PF02653 Branched-chain amino acid transport system / permease component EN12_05405 PF00005 ABC transporter EN12_05410 PF00990 Diguanylate cyclase, GGDEF domain EN12_05415 PF01207 Dihydrouridine synthase (Dus) EN12_05420 PF02810 SEC-C motif EN12_05420 PF07516 SecA Wing and Scaffold domain EN12_05420 PF01043 SecA preprotein cross-linking domain EN12_05420 PF07517 SecA DEAD-like domain EN12_05425 PF03548 Outer membrane lipoprotein carrier protein LolA EN12_05430 PF00004 ATPase family associated with various cellular activities (AAA) EN12_05430 PF16193 AAA C-terminal domain EN12_05430 PF12002 MgsA AAA+ ATPase C terminal EN12_05435 PF02403 Seryl-tRNA synthetase N-terminal domain EN12_05435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EN12_05440 PF00202 Aminotransferase class-III EN12_05445 PF06968 Biotin and Thiamin Synthesis associated domain EN12_05445 PF04055 Radical SAM superfamily EN12_05450 PF00155 Aminotransferase class I and II EN12_05455 PF08241 Methyltransferase domain EN12_05470 PF01435 Peptidase family M48 EN12_05480 PF00106 short chain dehydrogenase EN12_05505 PF16036 Chalcone isomerase-like EN12_05515 PF08328 Adenylosuccinate lyase C-terminal EN12_05515 PF00206 Lyase EN12_05520 PF04356 Protein of unknown function (DUF489) EN12_05530 PF00294 pfkB family carbohydrate kinase EN12_05540 PF03553 Na+/H+ antiporter family EN12_05545 PF08029 HisG, C-terminal domain EN12_05545 PF01634 ATP phosphoribosyltransferase EN12_05550 PF00815 Histidinol dehydrogenase EN12_05555 PF00155 Aminotransferase class I and II EN12_05560 PF08645 Polynucleotide kinase 3 phosphatase EN12_05560 PF00475 Imidazoleglycerol-phosphate dehydratase EN12_05565 PF00117 Glutamine amidotransferase class-I EN12_05570 PF00977 Histidine biosynthesis protein EN12_05575 PF00977 Histidine biosynthesis protein EN12_05580 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EN12_05580 PF01502 Phosphoribosyl-AMP cyclohydrolase EN12_05585 PF00849 RNA pseudouridylate synthase EN12_05590 PF03971 Monomeric isocitrate dehydrogenase EN12_05595 PF00313 'Cold-shock' DNA-binding domain EN12_05600 PF02617 ATP-dependent Clp protease adaptor protein ClpS EN12_05605 PF10431 C-terminal, D2-small domain, of ClpB protein EN12_05605 PF07724 AAA domain (Cdc48 subfamily) EN12_05605 PF17871 AAA lid domain EN12_05605 PF02861 Clp amino terminal domain, pathogenicity island component EN12_05605 PF00004 ATPase family associated with various cellular activities (AAA) EN12_05610 PF02080 TrkA-C domain EN12_05610 PF06826 Predicted Permease Membrane Region EN12_05615 PF00462 Glutaredoxin EN12_05620 PF00465 Iron-containing alcohol dehydrogenase EN12_05620 PF00171 Aldehyde dehydrogenase family EN12_05625 PF01418 Helix-turn-helix domain, rpiR family EN12_05625 PF01380 SIS domain EN12_05630 PF00282 Pyridoxal-dependent decarboxylase conserved domain EN12_05640 PF03956 Lysine exporter LysO EN12_05650 PF04994 TfoX C-terminal domain EN12_05650 PF04993 TfoX N-terminal domain EN12_05665 PF00989 PAS fold EN12_05665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_05665 PF00512 His Kinase A (phospho-acceptor) domain EN12_05675 PF00266 Aminotransferase class-V EN12_05690 PF18030 RimK PreATP-grasp domain EN12_05690 PF08443 RimK-like ATP-grasp domain EN12_05695 PF08003 Protein of unknown function (DUF1698) EN12_05700 PF13649 Methyltransferase domain EN12_05705 PF01904 Protein of unknown function DUF72 EN12_05710 PF02938 GAD domain EN12_05710 PF00152 tRNA synthetases class II (D, K and N) EN12_05710 PF01336 OB-fold nucleic acid binding domain EN12_05715 PF00265 Thymidine kinase EN12_05720 PF00375 Sodium:dicarboxylate symporter family EN12_05725 PF00290 Tryptophan synthase alpha chain EN12_05730 PF00291 Pyridoxal-phosphate dependent enzyme EN12_05735 PF00218 Indole-3-glycerol phosphate synthase EN12_05735 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EN12_05740 PF02885 Glycosyl transferase family, helical bundle domain EN12_05740 PF00591 Glycosyl transferase family, a/b domain EN12_05745 PF00117 Glutamine amidotransferase class-I EN12_05750 PF00425 chorismate binding enzyme EN12_05750 PF04715 Anthranilate synthase component I, N terminal region EN12_05755 PF08056 Tryptophan operon leader peptide EN12_05760 PF02811 PHP domain EN12_05765 PF01300 Telomere recombination EN12_05770 PF01479 S4 domain EN12_05770 PF00849 RNA pseudouridylate synthase EN12_05775 PF00664 ABC transporter transmembrane region EN12_05775 PF00005 ABC transporter EN12_05780 PF00664 ABC transporter transmembrane region EN12_05780 PF00005 ABC transporter EN12_05785 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_05800 PF00266 Aminotransferase class-V EN12_05805 PF08448 PAS fold EN12_05805 PF00990 Diguanylate cyclase, GGDEF domain EN12_05810 PF02698 DUF218 domain EN12_05820 PF00390 Malic enzyme, N-terminal domain EN12_05820 PF03949 Malic enzyme, NAD binding domain EN12_05830 PF01259 SAICAR synthetase EN12_05850 PF13488 Glycine zipper EN12_05850 PF00691 OmpA family EN12_05865 PF02913 FAD linked oxidases, C-terminal domain EN12_05865 PF01565 FAD binding domain EN12_05865 PF13183 4Fe-4S dicluster domain EN12_05870 PF04191 Phospholipid methyltransferase EN12_05875 PF00089 Trypsin EN12_05885 PF00221 Aromatic amino acid lyase EN12_05890 PF17391 Urocanase N-terminal domain EN12_05890 PF01175 Urocanase Rossmann-like domain EN12_05890 PF17392 Urocanase C-terminal domain EN12_05895 PF00491 Arginase family EN12_05900 PF01979 Amidohydrolase family EN12_05905 PF00392 Bacterial regulatory proteins, gntR family EN12_05905 PF07702 UTRA domain EN12_05915 PF04269 Protein of unknown function, DUF440 EN12_05920 PF09285 Elongation factor P, C-terminal EN12_05920 PF08207 Elongation factor P (EF-P) KOW-like domain EN12_05920 PF01132 Elongation factor P (EF-P) OB domain EN12_05930 PF13426 PAS domain EN12_05930 PF00563 EAL domain EN12_05930 PF00990 Diguanylate cyclase, GGDEF domain EN12_05935 PF03104 DNA polymerase family B, exonuclease domain EN12_05935 PF00136 DNA polymerase family B EN12_05940 PF00196 Bacterial regulatory proteins, luxR family EN12_05940 PF00072 Response regulator receiver domain EN12_05945 PF01541 GIY-YIG catalytic domain EN12_05945 PF08459 UvrC Helix-hairpin-helix N-terminal EN12_05945 PF02151 UvrB/uvrC motif EN12_05950 PF01066 CDP-alcohol phosphatidyltransferase EN12_05975 PF00990 Diguanylate cyclase, GGDEF domain EN12_05975 PF00072 Response regulator receiver domain EN12_05985 PF01409 tRNA synthetases class II core domain (F) EN12_05985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EN12_05990 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EN12_05990 PF01588 Putative tRNA binding domain EN12_05990 PF03147 Ferredoxin-fold anticodon binding domain EN12_05990 PF03484 tRNA synthetase B5 domain EN12_05990 PF03483 B3/4 domain EN12_05995 PF00216 Bacterial DNA-binding protein EN12_06010 PF05724 Thiopurine S-methyltransferase (TPMT) EN12_06015 PF02222 ATP-grasp domain EN12_06025 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region EN12_06025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EN12_06030 PF04172 LrgB-like family EN12_06035 PF03788 LrgA family EN12_06040 PF00929 Exonuclease EN12_06040 PF08411 Exonuclease C-terminal EN12_06050 PF01641 SelR domain EN12_06060 PF02277 Phosphoribosyltransferase EN12_06065 PF02654 Cobalamin-5-phosphate synthase EN12_06070 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EN12_06080 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EN12_06085 PF01032 FecCD transport family EN12_06090 PF00005 ABC transporter EN12_06105 PF17200 Single Cache domain 2 EN12_06105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06105 PF00672 HAMP domain EN12_06120 PF00994 Probable molybdopterin binding domain EN12_06130 PF00970 Oxidoreductase FAD-binding domain EN12_06130 PF00175 Oxidoreductase NAD-binding domain EN12_06130 PF00111 2Fe-2S iron-sulfur cluster binding domain EN12_06135 PF00268 Ribonucleotide reductase, small chain EN12_06140 PF00317 Ribonucleotide reductase, all-alpha domain EN12_06140 PF02867 Ribonucleotide reductase, barrel domain EN12_06140 PF03477 ATP cone domain EN12_06150 PF00521 DNA gyrase/topoisomerase IV, subunit A EN12_06150 PF03989 DNA gyrase C-terminal domain, beta-propeller EN12_06165 PF07690 Major Facilitator Superfamily EN12_06175 PF00925 GTP cyclohydrolase II EN12_06205 PF05951 Bacterial protein of unknown function (DUF882) EN12_06210 PF00753 Metallo-beta-lactamase superfamily EN12_06225 PF03480 Bacterial extracellular solute-binding protein, family 7 EN12_06235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EN12_06240 PF17200 Single Cache domain 2 EN12_06240 PF07730 Histidine kinase EN12_06245 PF00072 Response regulator receiver domain EN12_06245 PF00196 Bacterial regulatory proteins, luxR family EN12_06250 PF01047 MarR family EN12_06255 PF02028 BCCT, betaine/carnitine/choline family transporter EN12_06260 PF01522 Polysaccharide deacetylase EN12_06265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EN12_06270 PF02378 Phosphotransferase system, EIIC EN12_06275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EN12_06280 PF11975 Family 4 glycosyl hydrolase C-terminal domain EN12_06280 PF02056 Family 4 glycosyl hydrolase EN12_06285 PF04794 YdjC-like protein EN12_06290 PF00356 Bacterial regulatory proteins, lacI family EN12_06295 PF13506 Glycosyl transferase family 21 EN12_06300 PF04349 Periplasmic glucan biosynthesis protein, MdoG EN12_06305 PF17200 Single Cache domain 2 EN12_06305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06305 PF00672 HAMP domain EN12_06320 PF00155 Aminotransferase class I and II EN12_06330 PF01966 HD domain EN12_06330 PF00672 HAMP domain EN12_06335 PF08543 Phosphomethylpyrimidine kinase EN12_06340 PF00152 tRNA synthetases class II (D, K and N) EN12_06340 PF01336 OB-fold nucleic acid binding domain EN12_06345 PF00672 HAMP domain EN12_06345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06350 PF01242 6-pyruvoyl tetrahydropterin synthase EN12_06355 PF03315 Serine dehydratase beta chain EN12_06355 PF03313 Serine dehydratase alpha chain EN12_06360 PF03222 Tryptophan/tyrosine permease family EN12_06365 PF00293 NUDIX domain EN12_06370 PF00425 chorismate binding enzyme EN12_06370 PF04715 Anthranilate synthase component I, N terminal region EN12_06385 PF04317 YcjX-like family, DUF463 EN12_06390 PF05128 Domain of unknown function (DUF697) EN12_06395 PF18024 Helix-turn-helix domain EN12_06395 PF00158 Sigma-54 interaction domain EN12_06400 PF13302 Acetyltransferase (GNAT) domain EN12_06410 PF00892 EamA-like transporter family EN12_06415 PF01168 Alanine racemase, N-terminal domain EN12_06415 PF00842 Alanine racemase, C-terminal domain EN12_06420 PF00672 HAMP domain EN12_06420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06425 PF00939 Sodium:sulfate symporter transmembrane region EN12_06430 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_06430 PF00512 His Kinase A (phospho-acceptor) domain EN12_06435 PF00158 Sigma-54 interaction domain EN12_06435 PF00072 Response regulator receiver domain EN12_06435 PF02954 Bacterial regulatory protein, Fis family EN12_06440 PF04393 Protein of unknown function (DUF535) EN12_06445 PF06629 MltA-interacting protein MipA EN12_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_06450 PF00512 His Kinase A (phospho-acceptor) domain EN12_06450 PF00672 HAMP domain EN12_06455 PF00072 Response regulator receiver domain EN12_06455 PF00486 Transcriptional regulatory protein, C terminal EN12_06475 PF13407 Periplasmic binding protein domain EN12_06480 PF00005 ABC transporter EN12_06485 PF02653 Branched-chain amino acid transport system / permease component EN12_06500 PF01970 Tripartite tricarboxylate transporter TctA family EN12_06515 PF00392 Bacterial regulatory proteins, gntR family EN12_06515 PF07729 FCD domain EN12_06525 PF00285 Citrate synthase, C-terminal domain EN12_06530 PF00330 Aconitase family (aconitate hydratase) EN12_06530 PF00694 Aconitase C-terminal domain EN12_06535 PF04303 PrpF protein EN12_06540 PF16177 Acetyl-coenzyme A synthetase N-terminus EN12_06540 PF13193 AMP-binding enzyme C-terminal domain EN12_06540 PF00501 AMP-binding enzyme EN12_06555 PF07687 Peptidase dimerisation domain EN12_06555 PF01546 Peptidase family M20/M25/M40 EN12_06565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_06570 PF04209 homogentisate 1,2-dioxygenase EN12_06580 PF02798 Glutathione S-transferase, N-terminal domain EN12_06580 PF14497 Glutathione S-transferase, C-terminal domain EN12_06585 PF00072 Response regulator receiver domain EN12_06590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EN12_06590 PF01627 Hpt domain EN12_06590 PF00072 Response regulator receiver domain EN12_06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_06590 PF00672 HAMP domain EN12_06590 PF00512 His Kinase A (phospho-acceptor) domain EN12_06595 PF08534 Redoxin EN12_06595 PF00462 Glutaredoxin EN12_06600 PF00990 Diguanylate cyclase, GGDEF domain EN12_06605 PF10672 S-adenosylmethionine-dependent methyltransferase EN12_06605 PF17785 PUA-like domain EN12_06610 PF00708 Acylphosphatase EN12_06615 PF04358 DsrC like protein EN12_06620 PF01027 Inhibitor of apoptosis-promoting Bax1 EN12_06625 PF00005 ABC transporter EN12_06630 PF00528 Binding-protein-dependent transport system inner membrane component EN12_06635 PF00528 Binding-protein-dependent transport system inner membrane component EN12_06640 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_06645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EN12_06645 PF14824 Sirohaem biosynthesis protein central EN12_06645 PF10414 Sirohaem synthase dimerisation region EN12_06655 PF04055 Radical SAM superfamily EN12_06660 PF06508 Queuosine biosynthesis protein QueC EN12_06680 PF03707 Bacterial signalling protein N terminal repeat EN12_06680 PF00990 Diguanylate cyclase, GGDEF domain EN12_06680 PF00563 EAL domain EN12_06690 PF00990 Diguanylate cyclase, GGDEF domain EN12_06690 PF17158 Membrane-associated sensor, integral membrane domain EN12_06695 PF00012 Hsp70 protein EN12_06700 PF00012 Hsp70 protein EN12_06710 PF00563 EAL domain EN12_06710 PF03707 Bacterial signalling protein N terminal repeat EN12_06710 PF00990 Diguanylate cyclase, GGDEF domain EN12_06730 PF04408 Helicase associated domain (HA2) EN12_06730 PF00271 Helicase conserved C-terminal domain EN12_06730 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EN12_06730 PF11898 Domain of unknown function (DUF3418) EN12_06730 PF00270 DEAD/DEAH box helicase EN12_06740 PF00012 Hsp70 protein EN12_06745 PF10437 Bacterial lipoate protein ligase C-terminus EN12_06745 PF03099 Biotin/lipoate A/B protein ligase family EN12_06750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_06750 PF03466 LysR substrate binding domain EN12_06755 PF07690 Major Facilitator Superfamily EN12_06760 PF03441 FAD binding domain of DNA photolyase EN12_06760 PF00875 DNA photolyase EN12_06765 PF00893 Small Multidrug Resistance protein EN12_06770 PF00672 HAMP domain EN12_06770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06785 PF01627 Hpt domain EN12_06785 PF01584 CheW-like domain EN12_06785 PF02895 Signal transducing histidine kinase, homodimeric domain EN12_06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_06785 PF07194 P2 response regulator binding domain EN12_06790 PF00072 Response regulator receiver domain EN12_06790 PF01627 Hpt domain EN12_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_06790 PF01584 CheW-like domain EN12_06795 PF01739 CheR methyltransferase, SAM binding domain EN12_06795 PF03705 CheR methyltransferase, all-alpha domain EN12_06805 PF00072 Response regulator receiver domain EN12_06805 PF01339 CheB methylesterase EN12_06810 PF01584 CheW-like domain EN12_06815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06815 PF17202 Single cache domain 3 EN12_06815 PF00672 HAMP domain EN12_06820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06820 PF12729 Four helix bundle sensory module for signal transduction EN12_06820 PF00672 HAMP domain EN12_06825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06825 PF13426 PAS domain EN12_06825 PF08447 PAS fold EN12_06830 PF00271 Helicase conserved C-terminal domain EN12_06830 PF00270 DEAD/DEAH box helicase EN12_06840 PF02321 Outer membrane efflux protein EN12_06845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EN12_06845 PF00529 HlyD membrane-fusion protein of T1SS EN12_06850 PF07690 Major Facilitator Superfamily EN12_06855 PF00672 HAMP domain EN12_06855 PF02743 Cache domain EN12_06855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_06860 PF02074 Carboxypeptidase Taq (M32) metallopeptidase EN12_06865 PF05638 Type VI secretion system effector, Hcp EN12_06870 PF04717 Type VI secretion system, phage-baseplate injector EN12_06870 PF16671 Actin cross-linking domain EN12_06895 PF01810 LysE type translocator EN12_06900 PF01235 Sodium:alanine symporter family EN12_06915 PF13416 Bacterial extracellular solute-binding protein EN12_06920 PF13416 Bacterial extracellular solute-binding protein EN12_06925 PF00528 Binding-protein-dependent transport system inner membrane component EN12_06930 PF00528 Binding-protein-dependent transport system inner membrane component EN12_06935 PF08402 TOBE domain EN12_06935 PF00005 ABC transporter EN12_06955 PF01171 PP-loop family EN12_06960 PF00582 Universal stress protein family EN12_06965 PF00027 Cyclic nucleotide-binding domain EN12_06965 PF13545 Crp-like helix-turn-helix domain EN12_06980 PF00403 Heavy-metal-associated domain EN12_06990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EN12_06990 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EN12_07005 PF00115 Cytochrome C and Quinol oxidase polypeptide I EN12_07020 PF09308 LuxQ, periplasmic EN12_07020 PF00512 His Kinase A (phospho-acceptor) domain EN12_07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_07020 PF00072 Response regulator receiver domain EN12_07025 PF03412 Peptidase C39 family EN12_07025 PF00005 ABC transporter EN12_07025 PF00664 ABC transporter transmembrane region EN12_07035 PF00664 ABC transporter transmembrane region EN12_07035 PF03412 Peptidase C39 family EN12_07035 PF00005 ABC transporter EN12_07045 PF02794 RTX toxin acyltransferase family EN12_07050 PF11647 Membrane Localization Domain EN12_07050 PF16671 Actin cross-linking domain EN12_07050 PF07634 RtxA repeat EN12_07050 PF12146 Serine aminopeptidase, S33 EN12_07050 PF11713 Peptidase C80 family EN12_07055 PF01376 Heat-labile enterotoxin beta chain EN12_07060 PF01375 Heat-labile enterotoxin alpha chain EN12_07065 PF05707 Zonular occludens toxin (Zot) EN12_07070 PF10734 Protein of unknown function (DUF2523) EN12_07075 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII EN12_07100 PF01381 Helix-turn-helix EN12_07120 PF01381 Helix-turn-helix EN12_07185 PF01527 Transposase EN12_07190 PF00665 Integrase core domain EN12_07205 PF17414 MatP C-terminal ribbon-helix-helix domain EN12_07205 PF06303 MatP N-terminal domain EN12_07210 PF05362 Lon protease (S16) C-terminal proteolytic domain EN12_07210 PF13654 AAA domain EN12_07215 PF07977 FabA-like domain EN12_07235 PF01170 Putative RNA methylase family UPF0020 EN12_07235 PF10672 S-adenosylmethionine-dependent methyltransferase EN12_07235 PF02926 THUMP domain EN12_07240 PF07126 Cell-division protein ZapC EN12_07245 PF01180 Dihydroorotate dehydrogenase EN12_07250 PF05088 Bacterial NAD-glutamate dehydrogenase EN12_07260 PF01433 Peptidase family M1 domain EN12_07260 PF11940 Domain of unknown function (DUF3458) Ig-like fold EN12_07260 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EN12_07270 PF00595 PDZ domain EN12_07270 PF03572 Peptidase family S41 EN12_07270 PF17804 Tail specific protease N-terminal domain EN12_07270 PF11818 C-terminal domain of tail specific protease (DUF3340) EN12_07275 PF04352 ProQ/FINO family EN12_07275 PF17516 ProQ C-terminal domain EN12_07280 PF13185 GAF domain EN12_07285 PF00664 ABC transporter transmembrane region EN12_07285 PF00005 ABC transporter EN12_07290 PF04403 Paraquat-inducible protein A EN12_07295 PF02470 MlaD protein EN12_07300 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF EN12_07300 PF01189 16S rRNA methyltransferase RsmB/F EN12_07300 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF EN12_07305 PF13509 S1 domain EN12_07305 PF17783 CvfB-like winged helix domain EN12_07320 PF00793 DAHP synthetase I family EN12_07325 PF04461 Protein of unknown function (DUF520) EN12_07330 PF02146 Sir2 family EN12_07345 PF13247 4Fe-4S dicluster domain EN12_07350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EN12_07350 PF01568 Molydopterin dinucleotide binding domain EN12_07350 PF00384 Molybdopterin oxidoreductase EN12_07360 PF02613 Nitrate reductase delta subunit EN12_07380 PF02634 FdhD/NarQ family EN12_07385 PF12848 ABC transporter EN12_07385 PF00005 ABC transporter EN12_07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_07390 PF00989 PAS fold EN12_07390 PF00512 His Kinase A (phospho-acceptor) domain EN12_07395 PF00072 Response regulator receiver domain EN12_07395 PF02954 Bacterial regulatory protein, Fis family EN12_07395 PF00158 Sigma-54 interaction domain EN12_07400 PF12849 PBP superfamily domain EN12_07405 PF00528 Binding-protein-dependent transport system inner membrane component EN12_07410 PF00005 ABC transporter EN12_07410 PF08402 TOBE domain EN12_07415 PF12804 MobA-like NTP transferase domain EN12_07420 PF00994 Probable molybdopterin binding domain EN12_07420 PF03453 MoeA N-terminal region (domain I and II) EN12_07420 PF03454 MoeA C-terminal region (domain IV) EN12_07445 PF00480 ROK family EN12_07460 PF02743 Cache domain EN12_07460 PF00672 HAMP domain EN12_07460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_07465 PF00877 NlpC/P60 family EN12_07485 PF01554 MatE EN12_07495 PF01068 ATP dependent DNA ligase domain EN12_07495 PF14743 DNA ligase OB-like domain EN12_07505 PF03544 Gram-negative bacterial TonB protein C-terminal EN12_07510 PF02472 Biopolymer transport protein ExbD/TolR EN12_07515 PF01618 MotA/TolQ/ExbB proton channel family EN12_07520 PF01618 MotA/TolQ/ExbB proton channel family EN12_07530 PF13416 Bacterial extracellular solute-binding protein EN12_07535 PF00528 Binding-protein-dependent transport system inner membrane component EN12_07540 PF00528 Binding-protein-dependent transport system inner membrane component EN12_07545 PF17912 MalK OB fold domain EN12_07545 PF00005 ABC transporter EN12_07550 PF00455 DeoR C terminal sensor domain EN12_07550 PF08220 DeoR-like helix-turn-helix domain EN12_07555 PF03009 Glycerophosphoryl diester phosphodiesterase family EN12_07560 PF04074 YhcH/YjgK/YiaL EN12_07565 PF01042 Endoribonuclease L-PSP EN12_07570 PF00356 Bacterial regulatory proteins, lacI family EN12_07575 PF00232 Glycosyl hydrolase family 1 EN12_07580 PF00141 Peroxidase EN12_07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_07585 PF03466 LysR substrate binding domain EN12_07595 PF00529 HlyD membrane-fusion protein of T1SS EN12_07605 PF00005 ABC transporter EN12_07605 PF02687 FtsX-like permease family EN12_07605 PF12704 MacB-like periplasmic core domain EN12_07610 PF02687 FtsX-like permease family EN12_07610 PF12704 MacB-like periplasmic core domain EN12_07610 PF00005 ABC transporter EN12_07615 PF12704 MacB-like periplasmic core domain EN12_07615 PF02687 FtsX-like permease family EN12_07615 PF00005 ABC transporter EN12_07620 PF02322 Cytochrome bd terminal oxidase subunit II EN12_07625 PF01654 Cytochrome bd terminal oxidase subunit I EN12_07635 PF00206 Lyase EN12_07635 PF10415 Fumarase C C-terminus EN12_07665 PF13193 AMP-binding enzyme C-terminal domain EN12_07665 PF00501 AMP-binding enzyme EN12_07670 PF03466 LysR substrate binding domain EN12_07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_07675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EN12_07675 PF00361 Proton-conducting membrane transporter EN12_07680 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) EN12_07685 PF00080 Copper/zinc superoxide dismutase (SODC) EN12_07695 PF06628 Catalase-related immune-responsive EN12_07695 PF00199 Catalase EN12_07705 PF03466 LysR substrate binding domain EN12_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_07715 PF00205 Thiamine pyrophosphate enzyme, central domain EN12_07715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EN12_07715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EN12_07725 PF00563 EAL domain EN12_07725 PF17154 Gammaproteobacterial periplasmic sensor domain EN12_07725 PF00990 Diguanylate cyclase, GGDEF domain EN12_07725 PF00672 HAMP domain EN12_07730 PF00990 Diguanylate cyclase, GGDEF domain EN12_07735 PF01263 Aldose 1-epimerase EN12_07740 PF10509 Galactokinase galactose-binding signature EN12_07740 PF00288 GHMP kinases N terminal domain EN12_07740 PF08544 GHMP kinases C terminal EN12_07745 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EN12_07745 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EN12_07750 PF07690 Major Facilitator Superfamily EN12_07775 PF00990 Diguanylate cyclase, GGDEF domain EN12_07775 PF00072 Response regulator receiver domain EN12_07790 PF00072 Response regulator receiver domain EN12_07790 PF01584 CheW-like domain EN12_07800 PF12431 Transcriptional regulator EN12_07800 PF00072 Response regulator receiver domain EN12_07805 PF00989 PAS fold EN12_07805 PF17203 Single cache domain 3 EN12_07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_07805 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EN12_07820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EN12_07840 PF04204 Homoserine O-succinyltransferase EN12_07855 PF05971 RNA methyltransferase EN12_07860 PF01863 Protein of unknown function DUF45 EN12_07870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_07870 PF03466 LysR substrate binding domain EN12_07890 PF02321 Outer membrane efflux protein EN12_07895 PF00691 OmpA family EN12_07895 PF05736 OprF membrane domain EN12_07905 PF03435 Saccharopine dehydrogenase NADP binding domain EN12_07905 PF16653 Saccharopine dehydrogenase C-terminal domain EN12_07910 PF00202 Aminotransferase class-III EN12_07915 PF06965 Na+/H+ antiporter 1 EN12_07930 PF00005 ABC transporter EN12_07935 PF01554 MatE EN12_07940 PF13460 NAD(P)H-binding EN12_07940 PF11066 Protein of unknown function (DUF2867) EN12_07950 PF07690 Major Facilitator Superfamily EN12_07955 PF00849 RNA pseudouridylate synthase EN12_07955 PF01479 S4 domain EN12_07960 PF04851 Type III restriction enzyme, res subunit EN12_07960 PF00271 Helicase conserved C-terminal domain EN12_07970 PF00072 Response regulator receiver domain EN12_07970 PF00486 Transcriptional regulatory protein, C terminal EN12_07980 PF01386 Ribosomal L25p family EN12_07985 PF00990 Diguanylate cyclase, GGDEF domain EN12_07985 PF00360 Phytochrome region EN12_07985 PF00563 EAL domain EN12_07985 PF01590 GAF domain EN12_08000 PF00672 HAMP domain EN12_08000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_08000 PF12729 Four helix bundle sensory module for signal transduction EN12_08020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EN12_08020 PF12793 Sugar transport-related sRNA regulator N-term EN12_08030 PF01752 Collagenase EN12_08030 PF04151 Bacterial pre-peptidase C-terminal domain EN12_08030 PF08453 Peptidase family M9 N-terminal EN12_08040 PF03707 Bacterial signalling protein N terminal repeat EN12_08040 PF00990 Diguanylate cyclase, GGDEF domain EN12_08040 PF00563 EAL domain EN12_08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_08045 PF00512 His Kinase A (phospho-acceptor) domain EN12_08045 PF09308 LuxQ, periplasmic EN12_08045 PF00072 Response regulator receiver domain EN12_08050 PF01769 Divalent cation transporter EN12_08050 PF03448 MgtE intracellular N domain EN12_08050 PF00571 CBS domain EN12_08065 PF03222 Tryptophan/tyrosine permease family EN12_08070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EN12_08075 PF00005 ABC transporter EN12_08090 PF06945 Protein of unknown function (DUF1289) EN12_08100 PF13416 Bacterial extracellular solute-binding protein EN12_08105 PF00528 Binding-protein-dependent transport system inner membrane component EN12_08110 PF00005 ABC transporter EN12_08115 PF01066 CDP-alcohol phosphatidyltransferase EN12_08120 PF00849 RNA pseudouridylate synthase EN12_08125 PF00209 Sodium:neurotransmitter symporter family EN12_08130 PF13396 Phospholipase_D-nuclease N-terminal EN12_08130 PF13091 PLD-like domain EN12_08135 PF01053 Cys/Met metabolism PLP-dependent enzyme EN12_08140 PF03352 Methyladenine glycosylase EN12_08145 PF00873 AcrB/AcrD/AcrF family EN12_08150 PF13533 Biotin-lipoyl like EN12_08155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EN12_08155 PF00529 HlyD membrane-fusion protein of T1SS EN12_08170 PF04012 PspA/IM30 family EN12_08175 PF02954 Bacterial regulatory protein, Fis family EN12_08175 PF00158 Sigma-54 interaction domain EN12_08180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EN12_08185 PF00528 Binding-protein-dependent transport system inner membrane component EN12_08190 PF00528 Binding-protein-dependent transport system inner membrane component EN12_08190 PF12911 N-terminal TM domain of oligopeptide transport permease C EN12_08195 PF00005 ABC transporter EN12_08195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_08200 PF00005 ABC transporter EN12_08215 PF01368 DHH family EN12_08215 PF02833 DHHA2 domain EN12_08235 PF00384 Molybdopterin oxidoreductase EN12_08235 PF18364 Molybdopterin oxidoreductase N-terminal domain EN12_08235 PF01568 Molydopterin dinucleotide binding domain EN12_08240 PF03264 NapC/NirT cytochrome c family, N-terminal region EN12_08245 PF06796 Periplasmic nitrate reductase protein NapE EN12_08255 PF01226 Formate/nitrite transporter EN12_08265 PF01370 NAD dependent epimerase/dehydratase family EN12_08270 PF02698 DUF218 domain EN12_08280 PF04279 Intracellular septation protein A EN12_08285 PF03061 Thioesterase superfamily EN12_08290 PF03795 YCII-related domain EN12_08300 PF01717 Cobalamin-independent synthase, Catalytic domain EN12_08300 PF08267 Cobalamin-independent synthase, N-terminal domain EN12_08320 PF00675 Insulinase (Peptidase family M16) EN12_08320 PF05193 Peptidase M16 inactive domain EN12_08325 PF08447 PAS fold EN12_08325 PF08448 PAS fold EN12_08325 PF00563 EAL domain EN12_08325 PF00990 Diguanylate cyclase, GGDEF domain EN12_08330 PF04055 Radical SAM superfamily EN12_08330 PF08497 Radical SAM N-terminal EN12_08330 PF11842 Domain of unknown function (DUF3362) EN12_08335 PF01810 LysE type translocator EN12_08340 PF01037 Lrp/AsnC ligand binding domain EN12_08345 PF04310 MukB N-terminal EN12_08345 PF16330 MukB hinge domain EN12_08350 PF04288 MukE-like family EN12_08355 PF03882 MukF winged-helix domain EN12_08355 PF17193 MukF C-terminal domain EN12_08355 PF17192 MukF middle domain EN12_08365 PF02698 DUF218 domain EN12_08370 PF00486 Transcriptional regulatory protein, C terminal EN12_08370 PF00072 Response regulator receiver domain EN12_08375 PF02613 Nitrate reductase delta subunit EN12_08380 PF00356 Bacterial regulatory proteins, lacI family EN12_08385 PF04993 TfoX N-terminal domain EN12_08385 PF04994 TfoX C-terminal domain EN12_08405 PF00534 Glycosyl transferases group 1 EN12_08405 PF08323 Starch synthase catalytic domain EN12_08410 PF00483 Nucleotidyl transferase EN12_08415 PF08272 Topoisomerase I zinc-ribbon-like EN12_08415 PF01396 Topoisomerase DNA binding C4 zinc finger EN12_08415 PF01751 Toprim domain EN12_08415 PF01131 DNA topoisomerase EN12_08420 PF10692 Protein of unknown function (DUF2498) EN12_08425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EN12_08435 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EN12_08440 PF04376 Arginine-tRNA-protein transferase, N terminus EN12_08440 PF04377 Arginine-tRNA-protein transferase, C terminus EN12_08445 PF01176 Translation initiation factor 1A / IF-1 EN12_08450 PF07055 Enoyl reductase FAD binding domain EN12_08450 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EN12_08450 PF12241 Trans-2-enoyl-CoA reductase catalytic region EN12_08455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EN12_08455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EN12_08455 PF09317 Domain of unknown function (DUF1974) EN12_08455 PF02770 Acyl-CoA dehydrogenase, middle domain EN12_08460 PF16295 Tetracyclin repressor-like, C-terminal domain EN12_08460 PF00440 Bacterial regulatory proteins, tetR family EN12_08470 PF07383 Protein of unknown function (DUF1496) EN12_08475 PF00171 Aldehyde dehydrogenase family EN12_08480 PF00440 Bacterial regulatory proteins, tetR family EN12_08480 PF08362 YcdC-like protein, C-terminal region EN12_08500 PF00924 Mechanosensitive ion channel EN12_08500 PF05552 Conserved TM helix EN12_08505 PF04403 Paraquat-inducible protein A EN12_08510 PF02470 MlaD protein EN12_08520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EN12_08525 PF00873 AcrB/AcrD/AcrF family EN12_08535 PF00589 Phage integrase family EN12_08535 PF13356 Arm DNA-binding domain EN12_08545 PF12419 SNF2 Helicase protein EN12_08545 PF00271 Helicase conserved C-terminal domain EN12_08545 PF00176 SNF2 family N-terminal domain EN12_08565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EN12_08565 PF18766 SWI2/SNF2 ATPase EN12_08565 PF11867 Domain of unknown function (DUF3387) EN12_08585 PF02384 N-6 DNA Methylase EN12_08605 PF07646 Kelch motif EN12_08610 PF01344 Kelch motif EN12_08615 PF01418 Helix-turn-helix domain, rpiR family EN12_08615 PF01380 SIS domain EN12_08620 PF00701 Dihydrodipicolinate synthetase family EN12_08625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EN12_08630 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EN12_08635 PF03480 Bacterial extracellular solute-binding protein, family 7 EN12_08640 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EN12_08645 PF00480 ROK family EN12_08650 PF01979 Amidohydrolase family EN12_08655 PF09264 Vibrio cholerae sialidase, lectin insertion EN12_08655 PF13088 BNR repeat-like domain EN12_08665 PF04002 RadC-like JAB domain EN12_08680 PF00665 Integrase core domain EN12_08685 PF01527 Transposase EN12_08730 PF00005 ABC transporter EN12_08810 PF03441 FAD binding domain of DNA photolyase EN12_08810 PF00875 DNA photolyase EN12_08820 PF09905 DNA-binding protein VF530 EN12_08825 PF01590 GAF domain EN12_08825 PF00158 Sigma-54 interaction domain EN12_08825 PF02954 Bacterial regulatory protein, Fis family EN12_08830 PF00171 Aldehyde dehydrogenase family EN12_08850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EN12_08860 PF12833 Helix-turn-helix domain EN12_08865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EN12_08865 PF02378 Phosphotransferase system, EIIC EN12_08865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EN12_08870 PF01238 Phosphomannose isomerase type I EN12_08875 PF06610 L-alanine exporter EN12_08880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_08880 PF00512 His Kinase A (phospho-acceptor) domain EN12_08880 PF09308 LuxQ, periplasmic EN12_08880 PF00072 Response regulator receiver domain EN12_08890 PF02445 Quinolinate synthetase A protein EN12_08900 PF00691 OmpA family EN12_08905 PF07676 WD40-like Beta Propeller Repeat EN12_08905 PF04052 TolB amino-terminal domain EN12_08915 PF02472 Biopolymer transport protein ExbD/TolR EN12_08920 PF01618 MotA/TolQ/ExbB proton channel family EN12_08925 PF03061 Thioesterase superfamily EN12_08930 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) EN12_08935 PF08173 Membrane bound YbgT-like protein EN12_08940 PF02322 Cytochrome bd terminal oxidase subunit II EN12_08945 PF01654 Cytochrome bd terminal oxidase subunit I EN12_08950 PF05496 Holliday junction DNA helicase RuvB P-loop domain EN12_08950 PF05491 RuvB C-terminal winged helix domain EN12_08950 PF17864 RuvB AAA lid domain EN12_08955 PF01330 RuvA N terminal domain EN12_08955 PF07499 RuvA, C-terminal domain EN12_08960 PF02075 Crossover junction endodeoxyribonuclease RuvC EN12_08965 PF01406 tRNA synthetases class I (C) catalytic domain EN12_08965 PF09190 DALR domain EN12_08970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EN12_08975 PF00149 Calcineurin-like phosphoesterase EN12_08980 PF08668 HDOD domain EN12_08980 PF00563 EAL domain EN12_08985 PF02810 SEC-C motif EN12_08990 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EN12_08995 PF13609 Gram-negative porin EN12_09000 PF13307 Helicase C-terminal domain EN12_09000 PF06733 DEAD_2 EN12_09005 PF01925 Sulfite exporter TauE/SafE EN12_09010 PF07445 Primosomal replication protein priC EN12_09015 PF10689 Protein of unknown function (DUF2496) EN12_09020 PF00672 HAMP domain EN12_09020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_09025 PF03372 Endonuclease/Exonuclease/phosphatase family EN12_09030 PF00528 Binding-protein-dependent transport system inner membrane component EN12_09035 PF00528 Binding-protein-dependent transport system inner membrane component EN12_09040 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_09045 PF00005 ABC transporter EN12_09060 PF01228 Glycine radical EN12_09060 PF02901 Pyruvate formate lyase-like EN12_09070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_09070 PF00672 HAMP domain EN12_09070 PF12729 Four helix bundle sensory module for signal transduction EN12_09075 PF04055 Radical SAM superfamily EN12_09085 PF03887 YfbU domain EN12_09090 PF06798 PrkA serine protein kinase C-terminal domain EN12_09090 PF08298 PrkA AAA domain EN12_09095 PF04285 Protein of unknown function (DUF444) EN12_09100 PF04293 SpoVR like protein EN12_09105 PF02348 Cytidylyltransferase EN12_09110 PF03966 Trm112p-like protein EN12_09115 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EN12_09120 PF00005 ABC transporter EN12_09120 PF00664 ABC transporter transmembrane region EN12_09125 PF03772 Competence protein EN12_09125 PF00753 Metallo-beta-lactamase superfamily EN12_09125 PF13567 Domain of unknown function (DUF4131) EN12_09135 PF12704 MacB-like periplasmic core domain EN12_09135 PF02687 FtsX-like permease family EN12_09140 PF00005 ABC transporter EN12_09145 PF12704 MacB-like periplasmic core domain EN12_09145 PF02687 FtsX-like permease family EN12_09155 PF17757 UvrB interaction domain EN12_09155 PF03461 TRCF domain EN12_09155 PF00271 Helicase conserved C-terminal domain EN12_09155 PF00270 DEAD/DEAH box helicase EN12_09155 PF02559 CarD-like/TRCF domain EN12_09165 PF12563 Hemolytic toxin N terminal EN12_09165 PF16458 Beta-prism lectin EN12_09165 PF07968 Leukocidin/Hemolysin toxin family EN12_09175 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_09180 PF05728 Uncharacterised protein family (UPF0227) EN12_09190 PF13036 Peptidoglycan-synthase activator LpoB EN12_09190 PF08139 Prokaryotic membrane lipoprotein lipid attachment site EN12_09205 PF01230 HIT domain EN12_09210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_09210 PF00672 HAMP domain EN12_09220 PF07840 FadR C-terminal domain EN12_09220 PF00392 Bacterial regulatory proteins, gntR family EN12_09225 PF06450 Bacterial Na+/H+ antiporter B (NhaB) EN12_09230 PF02600 Disulfide bond formation protein DsbB EN12_09235 PF09397 Ftsk gamma domain EN12_09235 PF01580 FtsK/SpoIIIE family EN12_09235 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EN12_09235 PF17854 FtsK alpha domain EN12_09240 PF01037 Lrp/AsnC ligand binding domain EN12_09245 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EN12_09245 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EN12_09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_09255 PF03466 LysR substrate binding domain EN12_09270 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EN12_09275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EN12_09280 PF18073 Rubredoxin metal binding domain EN12_09285 PF06305 Lipopolysaccharide assembly protein A domain EN12_09290 PF00216 Bacterial DNA-binding protein EN12_09295 PF00575 S1 RNA binding domain EN12_09300 PF02224 Cytidylate kinase EN12_09310 PF13145 PPIC-type PPIASE domain EN12_09315 PF00216 Bacterial DNA-binding protein EN12_09320 PF02190 ATP-dependent protease La (LON) substrate-binding domain EN12_09320 PF05362 Lon protease (S16) C-terminal proteolytic domain EN12_09320 PF00004 ATPase family associated with various cellular activities (AAA) EN12_09325 PF06689 ClpX C4-type zinc finger EN12_09325 PF07724 AAA domain (Cdc48 subfamily) EN12_09325 PF10431 C-terminal, D2-small domain, of ClpB protein EN12_09330 PF00574 Clp protease EN12_09335 PF05697 Bacterial trigger factor protein (TF) EN12_09335 PF05698 Bacterial trigger factor protein (TF) C-terminus EN12_09335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EN12_09345 PF02743 Cache domain EN12_09345 PF00512 His Kinase A (phospho-acceptor) domain EN12_09345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_09350 PF00072 Response regulator receiver domain EN12_09350 PF02954 Bacterial regulatory protein, Fis family EN12_09350 PF00158 Sigma-54 interaction domain EN12_09355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EN12_09360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EN12_09365 PF03480 Bacterial extracellular solute-binding protein, family 7 EN12_09370 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EN12_09385 PF03707 Bacterial signalling protein N terminal repeat EN12_09385 PF13188 PAS domain EN12_09385 PF00563 EAL domain EN12_09385 PF00990 Diguanylate cyclase, GGDEF domain EN12_09430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EN12_09430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EN12_09435 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EN12_09440 PF01494 FAD binding domain EN12_09450 PF03466 LysR substrate binding domain EN12_09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_09460 PF00384 Molybdopterin oxidoreductase EN12_09460 PF18364 Molybdopterin oxidoreductase N-terminal domain EN12_09460 PF01568 Molydopterin dinucleotide binding domain EN12_09465 PF03264 NapC/NirT cytochrome c family, N-terminal region EN12_09470 PF00704 Glycosyl hydrolases family 18 EN12_09475 PF07670 Nucleoside recognition EN12_09475 PF01773 Na+ dependent nucleoside transporter N-terminus EN12_09475 PF07662 Na+ dependent nucleoside transporter C-terminus EN12_09485 PF03466 LysR substrate binding domain EN12_09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_09490 PF13406 Transglycosylase SLT domain EN12_09495 PF05166 YcgL domain EN12_09500 PF05209 Septum formation inhibitor MinC, N-terminal domain EN12_09500 PF03775 Septum formation inhibitor MinC, C-terminal domain EN12_09505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EN12_09510 PF03776 Septum formation topological specificity factor MinE EN12_09515 PF04170 NlpE N-terminal domain EN12_09535 PF07690 Major Facilitator Superfamily EN12_09545 PF12729 Four helix bundle sensory module for signal transduction EN12_09545 PF00672 HAMP domain EN12_09545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_09550 PF07883 Cupin domain EN12_09550 PF01381 Helix-turn-helix EN12_09555 PF03594 Benzoate membrane transport protein EN12_09560 PF00501 AMP-binding enzyme EN12_09560 PF13193 AMP-binding enzyme C-terminal domain EN12_09565 PF13378 Enolase C-terminal domain-like EN12_09570 PF00378 Enoyl-CoA hydratase/isomerase EN12_09575 PF12697 Alpha/beta hydrolase family EN12_09580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EN12_09580 PF16582 Middle domain of thiamine pyrophosphate EN12_09580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EN12_09585 PF00425 chorismate binding enzyme EN12_09590 PF00155 Aminotransferase class I and II EN12_09600 PF13286 Phosphohydrolase-associated domain EN12_09600 PF01966 HD domain EN12_09620 PF01612 3'-5' exonuclease EN12_09620 PF00570 HRDC domain EN12_09625 PF13193 AMP-binding enzyme C-terminal domain EN12_09625 PF00501 AMP-binding enzyme EN12_09630 PF00561 alpha/beta hydrolase fold EN12_09645 PF00814 Glycoprotease family EN12_09650 PF04851 Type III restriction enzyme, res subunit EN12_09650 PF13307 Helicase C-terminal domain EN12_09660 PF00551 Formyl transferase EN12_09660 PF01842 ACT domain EN12_09665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EN12_09665 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_09670 PF01343 Peptidase family S49 EN12_09675 PF17763 Glutaminase/Asparaginase C-terminal domain EN12_09675 PF00710 Asparaginase, N-terminal EN12_09680 PF07023 Protein of unknown function (DUF1315) EN12_09690 PF01641 SelR domain EN12_09695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EN12_09695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EN12_09700 PF01263 Aldose 1-epimerase EN12_09710 PF13847 Methyltransferase domain EN12_09725 PF00072 Response regulator receiver domain EN12_09725 PF01584 CheW-like domain EN12_09730 PF00480 ROK family EN12_09735 PF00224 Pyruvate kinase, barrel domain EN12_09735 PF02887 Pyruvate kinase, alpha/beta domain EN12_09740 PF01734 Patatin-like phospholipase EN12_09755 PF00209 Sodium:neurotransmitter symporter family EN12_09765 PF02378 Phosphotransferase system, EIIC EN12_09765 PF00367 phosphotransferase system, EIIB EN12_09770 PF01026 TatD related DNase EN12_09775 PF09115 DNA polymerase III, delta subunit, C terminal EN12_09780 PF02223 Thymidylate kinase EN12_09785 PF02618 YceG-like family EN12_09790 PF01063 Amino-transferase class IV EN12_09795 PF00109 Beta-ketoacyl synthase, N-terminal domain EN12_09795 PF02801 Beta-ketoacyl synthase, C-terminal domain EN12_09800 PF00550 Phosphopantetheine attachment site EN12_09810 PF00698 Acyl transferase domain EN12_09815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EN12_09815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EN12_09820 PF02504 Fatty acid synthesis protein EN12_09825 PF01783 Ribosomal L32p protein family EN12_09830 PF02620 Large ribosomal RNA subunit accumulation protein YceD EN12_09835 PF02545 Maf-like protein EN12_09840 PF01479 S4 domain EN12_09840 PF00849 RNA pseudouridylate synthase EN12_09850 PF10150 Ribonuclease E/G family EN12_09850 PF00575 S1 RNA binding domain EN12_09850 PF12111 Polyribonucleotide phosphorylase C terminal EN12_09855 PF00916 Sulfate permease family EN12_09855 PF01740 STAS domain EN12_09865 PF00465 Iron-containing alcohol dehydrogenase EN12_09865 PF00171 Aldehyde dehydrogenase family EN12_09870 PF01914 MarC family integral membrane protein EN12_09875 PF01118 Semialdehyde dehydrogenase, NAD binding domain EN12_09875 PF02774 Semialdehyde dehydrogenase, dimerisation domain EN12_09880 PF03553 Na+/H+ antiporter family EN12_09890 PF04245 37-kD nucleoid-associated bacterial protein EN12_09895 PF07208 Protein of unknown function (DUF1414) EN12_09900 PF11893 Domain of unknown function (DUF3413) EN12_09900 PF00884 Sulfatase EN12_09920 PF01131 DNA topoisomerase EN12_09920 PF01751 Toprim domain EN12_09925 PF00462 Glutaredoxin EN12_09930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EN12_09930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EN12_09945 PF04333 MlaA lipoprotein EN12_09955 PF03918 Cytochrome C biogenesis protein EN12_09960 PF08534 Redoxin EN12_09965 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EN12_09965 PF01578 Cytochrome C assembly protein EN12_09970 PF03100 CcmE EN12_09975 PF04995 Heme exporter protein D (CcmD) EN12_09980 PF01578 Cytochrome C assembly protein EN12_09985 PF03379 CcmB protein EN12_09990 PF00005 ABC transporter EN12_10000 PF01584 CheW-like domain EN12_10010 PF13614 AAA domain EN12_10015 PF00072 Response regulator receiver domain EN12_10015 PF01339 CheB methylesterase EN12_10020 PF01627 Hpt domain EN12_10020 PF07194 P2 response regulator binding domain EN12_10020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_10020 PF02895 Signal transducing histidine kinase, homodimeric domain EN12_10020 PF01584 CheW-like domain EN12_10025 PF04344 Chemotaxis phosphatase, CheZ EN12_10030 PF00072 Response regulator receiver domain EN12_10035 PF04542 Sigma-70 region 2 EN12_10035 PF04539 Sigma-70 region 3 EN12_10035 PF04545 Sigma-70, region 4 EN12_10040 PF10609 NUBPL iron-transfer P-loop NTPase EN12_10045 PF00448 SRP54-type protein, GTPase domain EN12_10050 PF00771 FHIPEP family EN12_10055 PF00300 Histidine phosphatase superfamily (branch 1) EN12_10060 PF05193 Peptidase M16 inactive domain EN12_10060 PF00675 Insulinase (Peptidase family M16) EN12_10070 PF00750 tRNA synthetases class I (R) EN12_10070 PF03485 Arginyl tRNA synthetase N terminal domain EN12_10070 PF05746 DALR anticodon binding domain EN12_10085 PF02421 Ferrous iron transport protein B EN12_10085 PF07664 Ferrous iron transport protein B C terminus EN12_10085 PF07670 Nucleoside recognition EN12_10090 PF04023 FeoA domain EN12_10095 PF12833 Helix-turn-helix domain EN12_10095 PF02311 AraC-like ligand binding domain EN12_10100 PF01297 Zinc-uptake complex component A periplasmic EN12_10105 PF00005 ABC transporter EN12_10110 PF00950 ABC 3 transport family EN12_10115 PF02629 CoA binding domain EN12_10115 PF00549 CoA-ligase EN12_10120 PF08442 ATP-grasp domain EN12_10120 PF00549 CoA-ligase EN12_10125 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EN12_10125 PF00364 Biotin-requiring enzyme EN12_10125 PF02817 e3 binding domain EN12_10130 PF02779 Transketolase, pyrimidine binding domain EN12_10130 PF16870 2-oxoglutarate dehydrogenase C-terminal EN12_10130 PF00676 Dehydrogenase E1 component EN12_10130 PF16078 2-oxoglutarate dehydrogenase N-terminus EN12_10135 PF13085 2Fe-2S iron-sulfur cluster binding domain EN12_10140 PF02910 Fumarate reductase flavoprotein C-term EN12_10140 PF00890 FAD binding domain EN12_10145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EN12_10150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EN12_10155 PF00285 Citrate synthase, C-terminal domain EN12_10160 PF01784 NIF3 (NGG1p interacting factor 3) EN12_10170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EN12_10170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EN12_10170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EN12_10170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EN12_10175 PF03925 SeqA protein C-terminal domain EN12_10175 PF17206 SeqA protein N-terminal domain EN12_10180 PF12697 Alpha/beta hydrolase family EN12_10190 PF00258 Flavodoxin EN12_10195 PF04172 LrgB-like family EN12_10200 PF03788 LrgA family EN12_10205 PF03466 LysR substrate binding domain EN12_10205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_10215 PF01475 Ferric uptake regulator family EN12_10220 PF02774 Semialdehyde dehydrogenase, dimerisation domain EN12_10220 PF01118 Semialdehyde dehydrogenase, NAD binding domain EN12_10225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EN12_10225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EN12_10225 PF11890 Domain of unknown function (DUF3410) EN12_10230 PF02801 Beta-ketoacyl synthase, C-terminal domain EN12_10230 PF00109 Beta-ketoacyl synthase, N-terminal domain EN12_10235 PF01266 FAD dependent oxidoreductase EN12_10235 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EN12_10240 PF03358 NADPH-dependent FMN reductase EN12_10245 PF08891 YfcL protein EN12_10250 PF04315 Elongation factor P hydroxylase EN12_10255 PF03458 UPF0126 domain EN12_10260 PF01264 Chorismate synthase EN12_10265 PF05175 Methyltransferase small domain EN12_10270 PF01713 Smr domain EN12_10275 PF01312 FlhB HrpN YscU SpaS Family EN12_10280 PF01311 Bacterial export proteins, family 1 EN12_10285 PF01313 Bacterial export proteins, family 3 EN12_10290 PF00813 FliP family EN12_10295 PF04347 Flagellar biosynthesis protein, FliO EN12_10300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EN12_10305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EN12_10305 PF02154 Flagellar motor switch protein FliM EN12_10310 PF03748 Flagellar basal body-associated protein FliL EN12_10325 PF18269 T3SS EscN ATPase C-terminal domain EN12_10325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EN12_10330 PF02108 Flagellar assembly protein FliH EN12_10335 PF14841 FliG middle domain EN12_10335 PF01706 FliG C-terminal domain EN12_10335 PF14842 FliG N-terminal domain EN12_10340 PF01514 Secretory protein of YscJ/FliF family EN12_10340 PF08345 Flagellar M-ring protein C-terminal EN12_10345 PF02049 Flagellar hook-basal body complex protein FliE EN12_10350 PF00158 Sigma-54 interaction domain EN12_10350 PF00072 Response regulator receiver domain EN12_10350 PF02954 Bacterial regulatory protein, Fis family EN12_10355 PF08447 PAS fold EN12_10355 PF13426 PAS domain EN12_10355 PF00512 His Kinase A (phospho-acceptor) domain EN12_10355 PF13493 Domain of unknown function (DUF4118) EN12_10355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_10355 PF00989 PAS fold EN12_10360 PF00158 Sigma-54 interaction domain EN12_10360 PF02954 Bacterial regulatory protein, Fis family EN12_10360 PF00072 Response regulator receiver domain EN12_10365 PF02561 Flagellar protein FliS EN12_10375 PF07196 Flagellin hook IN motif EN12_10375 PF07195 Flagellar hook-associated protein 2 C-terminus EN12_10375 PF02465 Flagellar hook-associated protein 2 N-terminus EN12_10380 PF03646 FlaG protein EN12_10385 PF00700 Bacterial flagellin C-terminal helical region EN12_10385 PF00669 Bacterial flagellin N-terminal helical region EN12_10385 PF07196 Flagellin hook IN motif EN12_10390 PF00669 Bacterial flagellin N-terminal helical region EN12_10390 PF00700 Bacterial flagellin C-terminal helical region EN12_10390 PF07196 Flagellin hook IN motif EN12_10395 PF00700 Bacterial flagellin C-terminal helical region EN12_10395 PF00669 Bacterial flagellin N-terminal helical region EN12_10395 PF07196 Flagellin hook IN motif EN12_10400 PF04261 Dyp-type peroxidase family EN12_10405 PF11143 Protein of unknown function (DUF2919) EN12_10420 PF03960 ArsC family EN12_10425 PF01546 Peptidase family M20/M25/M40 EN12_10425 PF07687 Peptidase dimerisation domain EN12_10430 PF02557 D-alanyl-D-alanine carboxypeptidase EN12_10440 PF06804 NlpB/DapX lipoprotein EN12_10445 PF00701 Dihydrodipicolinate synthetase family EN12_10455 PF00578 AhpC/TSA family EN12_10460 PF02743 Cache domain EN12_10460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_10460 PF00672 HAMP domain EN12_10465 PF01594 AI-2E family transporter EN12_10475 PF13181 Tetratricopeptide repeat EN12_10475 PF01435 Peptidase family M48 EN12_10480 PF03960 ArsC family EN12_10485 PF03358 NADPH-dependent FMN reductase EN12_10500 PF00860 Permease family EN12_10505 PF04073 Aminoacyl-tRNA editing domain EN12_10510 PF02872 5'-nucleotidase, C-terminal domain EN12_10510 PF00149 Calcineurin-like phosphoesterase EN12_10515 PF00793 DAHP synthetase I family EN12_10520 PF13369 Transglutaminase-like superfamily EN12_10525 PF04247 Invasion gene expression up-regulator, SirB EN12_10530 PF17827 PrmC N-terminal domain EN12_10530 PF13847 Methyltransferase domain EN12_10535 PF00472 RF-1 domain EN12_10535 PF03462 PCRF domain EN12_10540 PF01488 Shikimate / quinate 5-dehydrogenase EN12_10540 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EN12_10540 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EN12_10545 PF03550 Outer membrane lipoprotein LolB EN12_10550 PF00288 GHMP kinases N terminal domain EN12_10550 PF08544 GHMP kinases C terminal EN12_10555 PF14572 Phosphoribosyl synthetase-associated domain EN12_10555 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EN12_10560 PF01195 Peptidyl-tRNA hydrolase EN12_10565 PF01926 50S ribosome-binding GTPase EN12_10565 PF06071 Protein of unknown function (DUF933) EN12_10650 PF00669 Bacterial flagellin N-terminal helical region EN12_10650 PF00700 Bacterial flagellin C-terminal helical region EN12_10650 PF07196 Flagellin hook IN motif EN12_10655 PF07196 Flagellin hook IN motif EN12_10655 PF00669 Bacterial flagellin N-terminal helical region EN12_10655 PF00700 Bacterial flagellin C-terminal helical region EN12_10665 PF07196 Flagellin hook IN motif EN12_10665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EN12_10670 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EN12_10670 PF10135 Rod binding protein EN12_10675 PF02119 Flagellar P-ring protein EN12_10680 PF02107 Flagellar L-ring protein EN12_10685 PF00460 Flagella basal body rod protein EN12_10685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EN12_10690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EN12_10690 PF00460 Flagella basal body rod protein EN12_10695 PF07559 Flagellar basal body protein FlaE EN12_10695 PF00460 Flagella basal body rod protein EN12_10695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EN12_10700 PF13861 FlgD Tudor-like domain EN12_10700 PF13860 FlgD Ig-like domain EN12_10700 PF03963 Flagellar hook capping protein - N-terminal region EN12_10705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EN12_10705 PF00460 Flagella basal body rod protein EN12_10710 PF00460 Flagella basal body rod protein EN12_10715 PF03705 CheR methyltransferase, all-alpha domain EN12_10715 PF01739 CheR methyltransferase, SAM binding domain EN12_10720 PF01584 CheW-like domain EN12_10720 PF00072 Response regulator receiver domain EN12_10755 PF00501 AMP-binding enzyme EN12_10755 PF00668 Condensation domain EN12_10755 PF08242 Methyltransferase domain EN12_10755 PF00550 Phosphopantetheine attachment site EN12_10760 PF04954 Siderophore-interacting protein EN12_10760 PF08021 Siderophore-interacting FAD-binding domain EN12_10765 PF07715 TonB-dependent Receptor Plug Domain EN12_10775 PF01389 OmpA-like transmembrane domain EN12_10775 PF00691 OmpA family EN12_10780 PF00749 tRNA synthetases class I (E and Q), catalytic domain EN12_10785 PF00403 Heavy-metal-associated domain EN12_10795 PF03173 Putative carbohydrate binding domain EN12_10795 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain EN12_10795 PF00728 Glycosyl hydrolase family 20, catalytic domain EN12_10795 PF02838 Glycosyl hydrolase family 20, domain 2 EN12_10800 PF01963 TraB family EN12_10815 PF01713 Smr domain EN12_10820 PF01479 S4 domain EN12_10820 PF00849 RNA pseudouridylate synthase EN12_10825 PF00990 Diguanylate cyclase, GGDEF domain EN12_10825 PF08448 PAS fold EN12_10835 PF02769 AIR synthase related protein, C-terminal domain EN12_10835 PF00586 AIR synthase related protein, N-terminal domain EN12_10840 PF00551 Formyl transferase EN12_10845 PF13230 Glutamine amidotransferases class-II EN12_10850 PF13580 SIS domain EN12_10855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EN12_10855 PF02770 Acyl-CoA dehydrogenase, middle domain EN12_10855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EN12_10855 PF09317 Domain of unknown function (DUF1974) EN12_10865 PF00929 Exonuclease EN12_10870 PF00075 RNase H EN12_10875 PF08241 Methyltransferase domain EN12_10880 PF16123 Hydroxyacylglutathione hydrolase C-terminus EN12_10880 PF00753 Metallo-beta-lactamase superfamily EN12_10885 PF01464 Transglycosylase SLT domain EN12_10885 PF01476 LysM domain EN12_10890 PF03372 Endonuclease/Exonuclease/phosphatase family EN12_10895 PF00543 Nitrogen regulatory protein P-II EN12_10900 PF05870 Phenolic acid decarboxylase (PAD) EN12_10905 PF00034 Cytochrome c EN12_10910 PF11734 TilS substrate C-terminal domain EN12_10910 PF09179 TilS substrate binding domain EN12_10910 PF01171 PP-loop family EN12_10915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EN12_10920 PF07733 Bacterial DNA polymerase III alpha NTPase domain EN12_10920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EN12_10920 PF14579 Helix-hairpin-helix motif EN12_10920 PF02811 PHP domain EN12_10920 PF01336 OB-fold nucleic acid binding domain EN12_10925 PF01351 Ribonuclease HII EN12_10930 PF02684 Lipid-A-disaccharide synthetase EN12_10935 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_10935 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EN12_10940 PF07977 FabA-like domain EN12_10945 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EN12_10945 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_10950 PF03938 Outer membrane protein (OmpH-like) EN12_10955 PF01103 Surface antigen EN12_10955 PF07244 Surface antigen variable number repeat EN12_10960 PF02163 Peptidase family M50 EN12_10960 PF17820 PDZ domain EN12_10965 PF13288 DXP reductoisomerase C-terminal domain EN12_10965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EN12_10965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EN12_10975 PF01255 Putative undecaprenyl diphosphate synthase EN12_10980 PF01765 Ribosome recycling factor EN12_10985 PF00696 Amino acid kinase family EN12_10990 PF00889 Elongation factor TS EN12_10995 PF00318 Ribosomal protein S2 EN12_11000 PF00557 Metallopeptidase family M24 EN12_11005 PF01966 HD domain EN12_11005 PF01909 Nucleotidyltransferase domain EN12_11005 PF08335 GlnD PII-uridylyltransferase EN12_11010 PF11944 Protein of unknown function (DUF3461) EN12_11015 PF04608 Phosphatidylglycerophosphatase A EN12_11020 PF02769 AIR synthase related protein, C-terminal domain EN12_11020 PF00586 AIR synthase related protein, N-terminal domain EN12_11025 PF01029 NusB family EN12_11030 PF00885 6,7-dimethyl-8-ribityllumazine synthase EN12_11035 PF00925 GTP cyclohydrolase II EN12_11035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EN12_11040 PF00677 Lumazine binding domain EN12_11045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EN12_11045 PF01872 RibD C-terminal domain EN12_11050 PF03477 ATP cone domain EN12_11055 PF00171 Aldehyde dehydrogenase family EN12_11060 PF01472 PUA domain EN12_11060 PF00696 Amino acid kinase family EN12_11065 PF07417 Sigma factor-binding transcriptional regulator Crl EN12_11075 PF00156 Phosphoribosyl transferase domain EN12_11080 PF00860 Permease family EN12_11085 PF07687 Peptidase dimerisation domain EN12_11085 PF01546 Peptidase family M20/M25/M40 EN12_11090 PF18030 RimK PreATP-grasp domain EN12_11090 PF08443 RimK-like ATP-grasp domain EN12_11095 PF18030 RimK PreATP-grasp domain EN12_11095 PF08443 RimK-like ATP-grasp domain EN12_11105 PF00209 Sodium:neurotransmitter symporter family EN12_11110 PF00990 Diguanylate cyclase, GGDEF domain EN12_11110 PF17158 Membrane-associated sensor, integral membrane domain EN12_11115 PF00872 Transposase, Mutator family EN12_11135 PF00817 impB/mucB/samB family EN12_11135 PF11798 IMS family HHH motif EN12_11145 PF02424 ApbE family EN12_11150 PF00970 Oxidoreductase FAD-binding domain EN12_11150 PF00111 2Fe-2S iron-sulfur cluster binding domain EN12_11150 PF00175 Oxidoreductase NAD-binding domain EN12_11155 PF02508 Rnf-Nqr subunit, membrane protein EN12_11160 PF02508 Rnf-Nqr subunit, membrane protein EN12_11165 PF04205 FMN-binding domain EN12_11170 PF03116 NQR2, RnfD, RnfE family EN12_11175 PF11973 NQRA C-terminal domain EN12_11175 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EN12_11180 PF01722 BolA-like protein EN12_11185 PF05175 Methyltransferase small domain EN12_11195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EN12_11200 PF07690 Major Facilitator Superfamily EN12_11210 PF04545 Sigma-70, region 4 EN12_11210 PF04542 Sigma-70 region 2 EN12_11220 PF03502 Nucleoside-specific channel-forming protein, Tsx EN12_11225 PF02558 Ketopantoate reductase PanE/ApbA EN12_11225 PF08546 Ketopantoate reductase PanE/ApbA C terminal EN12_11230 PF01965 DJ-1/PfpI family EN12_11235 PF00266 Aminotransferase class-V EN12_11240 PF02657 Fe-S metabolism associated domain EN12_11245 PF00899 ThiF family EN12_11250 PF03562 MltA specific insert domain EN12_11250 PF06725 3D domain EN12_11260 PF00583 Acetyltransferase (GNAT) family EN12_11260 PF00696 Amino acid kinase family EN12_11275 PF13538 UvrD-like helicase C-terminal domain EN12_11280 PF13361 UvrD-like helicase C-terminal domain EN12_11280 PF00580 UvrD/REP helicase N-terminal domain EN12_11280 PF12705 PD-(D/E)XK nuclease superfamily EN12_11285 PF17946 RecC C-terminal domain EN12_11300 PF07130 YebG protein EN12_11305 PF14602 Hexapeptide repeat of succinyl-transferase EN12_11305 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle EN12_11315 PF00583 Acetyltransferase (GNAT) family EN12_11325 PF18030 RimK PreATP-grasp domain EN12_11325 PF02080 TrkA-C domain EN12_11325 PF08443 RimK-like ATP-grasp domain EN12_11330 PF01544 CorA-like Mg2+ transporter protein EN12_11340 PF01588 Putative tRNA binding domain EN12_11345 PF00356 Bacterial regulatory proteins, lacI family EN12_11350 PF16353 Domain of unknown function(DUF4981) EN12_11350 PF02837 Glycosyl hydrolases family 2, sugar binding domain EN12_11350 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EN12_11350 PF00703 Glycosyl hydrolases family 2 EN12_11350 PF02929 Beta galactosidase small chain EN12_11360 PF00072 Response regulator receiver domain EN12_11365 PF00501 AMP-binding enzyme EN12_11370 PF03144 Elongation factor Tu domain 2 EN12_11370 PF03764 Elongation factor G, domain IV EN12_11370 PF00009 Elongation factor Tu GTP binding domain EN12_11370 PF00679 Elongation factor G C-terminus EN12_11370 PF14492 Elongation Factor G, domain II EN12_11375 PF18073 Rubredoxin metal binding domain EN12_11385 PF18429 Domain of unknown function (DUF5609) EN12_11395 PF01048 Phosphorylase superfamily EN12_11400 PF01676 Metalloenzyme superfamily EN12_11405 PF00591 Glycosyl transferase family, a/b domain EN12_11405 PF02885 Glycosyl transferase family, helical bundle domain EN12_11405 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EN12_11410 PF01791 DeoC/LacD family aldolase EN12_11415 PF07662 Na+ dependent nucleoside transporter C-terminus EN12_11415 PF01773 Na+ dependent nucleoside transporter N-terminus EN12_11415 PF07670 Nucleoside recognition EN12_11420 PF01026 TatD related DNase EN12_11425 PF03883 Peroxide stress protein YaaA EN12_11430 PF01235 Sodium:alanine symporter family EN12_11445 PF03167 Uracil DNA glycosylase superfamily EN12_11450 PF01261 Xylose isomerase-like TIM barrel EN12_11455 PF01228 Glycine radical EN12_11460 PF00291 Pyridoxal-phosphate dependent enzyme EN12_11460 PF14821 Threonine synthase N terminus EN12_11465 PF08544 GHMP kinases C terminal EN12_11465 PF00288 GHMP kinases N terminal domain EN12_11470 PF00742 Homoserine dehydrogenase EN12_11470 PF03447 Homoserine dehydrogenase, NAD binding domain EN12_11470 PF13840 ACT domain EN12_11470 PF01842 ACT domain EN12_11470 PF00696 Amino acid kinase family EN12_11480 PF03737 Aldolase/RraA EN12_11490 PF00072 Response regulator receiver domain EN12_11490 PF00486 Transcriptional regulatory protein, C terminal EN12_11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_11495 PF18415 Histidine kinase receptor ArcB trans-membrane domain EN12_11495 PF00512 His Kinase A (phospho-acceptor) domain EN12_11495 PF00072 Response regulator receiver domain EN12_11495 PF00989 PAS fold EN12_11495 PF01627 Hpt domain EN12_11500 PF00563 EAL domain EN12_11500 PF01590 GAF domain EN12_11500 PF00990 Diguanylate cyclase, GGDEF domain EN12_11500 PF00360 Phytochrome region EN12_11505 PF16199 Radical_SAM C-terminal domain EN12_11505 PF04055 Radical SAM superfamily EN12_11510 PF01493 GXGXG motif EN12_11510 PF00310 Glutamine amidotransferases class-II EN12_11510 PF01645 Conserved region in glutamate synthase EN12_11510 PF04898 Glutamate synthase central domain EN12_11515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EN12_11515 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_11520 PF00310 Glutamine amidotransferases class-II EN12_11520 PF04898 Glutamate synthase central domain EN12_11520 PF01645 Conserved region in glutamate synthase EN12_11520 PF01493 GXGXG motif EN12_11525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EN12_11525 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_11535 PF01048 Phosphorylase superfamily EN12_11545 PF01497 Periplasmic binding protein EN12_11550 PF03458 UPF0126 domain EN12_11555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_11555 PF03466 LysR substrate binding domain EN12_11560 PF01925 Sulfite exporter TauE/SafE EN12_11565 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EN12_11590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EN12_11590 PF02142 MGS-like domain EN12_11590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EN12_11595 PF00117 Glutamine amidotransferase class-I EN12_11595 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EN12_11605 PF05173 Dihydrodipicolinate reductase, C-terminus EN12_11605 PF01113 Dihydrodipicolinate reductase, N-terminus EN12_11610 PF00293 NUDIX domain EN12_11615 PF07517 SecA DEAD-like domain EN12_11615 PF01043 SecA preprotein cross-linking domain EN12_11615 PF07516 SecA Wing and Scaffold domain EN12_11615 PF02810 SEC-C motif EN12_11625 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EN12_11630 PF00091 Tubulin/FtsZ family, GTPase domain EN12_11630 PF12327 FtsZ family, C-terminal domain EN12_11635 PF02491 SHS2 domain inserted in FTSA EN12_11640 PF03799 Cell division protein FtsQ EN12_11640 PF08478 POTRA domain, FtsQ-type EN12_11645 PF01225 Mur ligase family, catalytic domain EN12_11645 PF02875 Mur ligase family, glutamate ligase domain EN12_11645 PF08245 Mur ligase middle domain EN12_11650 PF04101 Glycosyltransferase family 28 C-terminal domain EN12_11650 PF03033 Glycosyltransferase family 28 N-terminal domain EN12_11655 PF01098 Cell cycle protein EN12_11660 PF02875 Mur ligase family, glutamate ligase domain EN12_11660 PF08245 Mur ligase middle domain EN12_11665 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EN12_11665 PF00953 Glycosyl transferase family 4 EN12_11670 PF08245 Mur ligase middle domain EN12_11670 PF02875 Mur ligase family, glutamate ligase domain EN12_11670 PF01225 Mur ligase family, catalytic domain EN12_11675 PF02875 Mur ligase family, glutamate ligase domain EN12_11675 PF08245 Mur ligase middle domain EN12_11675 PF01225 Mur ligase family, catalytic domain EN12_11680 PF03717 Penicillin-binding Protein dimerisation domain EN12_11680 PF00905 Penicillin binding protein transpeptidase domain EN12_11685 PF04999 Cell division protein FtsL EN12_11690 PF01795 MraW methylase family EN12_11695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EN12_11695 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_11700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EN12_11700 PF00364 Biotin-requiring enzyme EN12_11700 PF02817 e3 binding domain EN12_11705 PF17831 Pyruvate dehydrogenase E1 component middle domain EN12_11705 PF00456 Transketolase, thiamine diphosphate binding domain EN12_11710 PF07729 FCD domain EN12_11710 PF00392 Bacterial regulatory proteins, gntR family EN12_11715 PF02872 5'-nucleotidase, C-terminal domain EN12_11715 PF00149 Calcineurin-like phosphoesterase EN12_11720 PF01368 DHH family EN12_11720 PF17768 RecJ OB domain EN12_11720 PF02272 DHHA1 domain EN12_11725 PF10411 Disulfide bond isomerase protein N-terminus EN12_11725 PF13098 Thioredoxin-like domain EN12_11730 PF02899 Phage integrase, N-terminal SAM-like domain EN12_11730 PF00589 Phage integrase family EN12_11735 PF00258 Flavodoxin EN12_11740 PF01510 N-acetylmuramoyl-L-alanine amidase EN12_11745 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EN12_11745 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EN12_11750 PF00114 Pilin (bacterial filament) EN12_11750 PF07963 Prokaryotic N-terminal methylation motif EN12_11755 PF00437 Type II/IV secretion system protein EN12_11755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EN12_11760 PF00482 Type II secretion system (T2SS), protein F EN12_11765 PF01478 Type IV leader peptidase family EN12_11765 PF06750 Bacterial Peptidase A24 N-terminal domain EN12_11770 PF01121 Dephospho-CoA kinase EN12_11775 PF07072 Cell division protein EN12_11785 PF03884 DNA gyrase inhibitor YacG EN12_11790 PF00521 DNA gyrase/topoisomerase IV, subunit A EN12_11790 PF03989 DNA gyrase C-terminal domain, beta-propeller EN12_11795 PF01751 Toprim domain EN12_11795 PF00986 DNA gyrase B subunit, carboxyl terminus EN12_11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_11795 PF00204 DNA gyrase B EN12_11800 PF05728 Uncharacterised protein family (UPF0227) EN12_11805 PF00149 Calcineurin-like phosphoesterase EN12_11810 PF06853 Protein of unknown function (DUF1249) EN12_11815 PF00293 NUDIX domain EN12_11820 PF02321 Outer membrane efflux protein EN12_11825 PF00294 pfkB family carbohydrate kinase EN12_11825 PF01467 Cytidylyltransferase-like EN12_11830 PF08335 GlnD PII-uridylyltransferase EN12_11830 PF03710 Glutamate-ammonia ligase adenylyltransferase EN12_11835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_11835 PF02743 Cache domain EN12_11835 PF00672 HAMP domain EN12_11845 PF01928 CYTH domain EN12_11850 PF01865 Protein of unknown function DUF47 EN12_11855 PF01384 Phosphate transporter family EN12_11860 PF08239 Bacterial SH3 domain EN12_11870 PF13401 AAA domain EN12_11870 PF01471 Putative peptidoglycan binding domain EN12_11875 PF01966 HD domain EN12_11875 PF01743 Poly A polymerase head domain EN12_11875 PF12627 Probable RNA and SrmB- binding site of polymerase A EN12_11880 PF03952 Enolase, N-terminal domain EN12_11880 PF00113 Enolase, C-terminal TIM barrel domain EN12_11885 PF06418 CTP synthase N-terminus EN12_11885 PF00117 Glutamine amidotransferase class-I EN12_11890 PF03819 MazG nucleotide pyrophosphohydrolase domain EN12_11895 PF04607 Region found in RelA / SpoT proteins EN12_11895 PF13291 ACT domain EN12_11895 PF02824 TGS domain EN12_11900 PF01938 TRAM domain EN12_11900 PF05958 tRNA (Uracil-5-)-methyltransferase EN12_11905 PF00672 HAMP domain EN12_11905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EN12_11905 PF00072 Response regulator receiver domain EN12_11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_11905 PF00512 His Kinase A (phospho-acceptor) domain EN12_11905 PF01627 Hpt domain EN12_11910 PF00563 EAL domain EN12_11910 PF00990 Diguanylate cyclase, GGDEF domain EN12_11925 PF01648 4'-phosphopantetheinyl transferase superfamily EN12_11930 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EN12_11935 PF11967 Recombination protein O N terminal EN12_11935 PF02565 Recombination protein O C terminal EN12_11940 PF01926 50S ribosome-binding GTPase EN12_11940 PF07650 KH domain EN12_11945 PF00035 Double-stranded RNA binding motif EN12_11945 PF14622 Ribonuclease-III-like EN12_11950 PF10502 Signal peptidase, peptidase S26 EN12_11955 PF03144 Elongation factor Tu domain 2 EN12_11955 PF06421 GTP-binding protein LepA C-terminus EN12_11955 PF00679 Elongation factor G C-terminus EN12_11955 PF00009 Elongation factor Tu GTP binding domain EN12_11965 PF17188 MucB/RseB C-terminal domain EN12_11965 PF03888 MucB/RseB N-terminal domain EN12_11970 PF03873 Anti sigma-E protein RseA, C-terminal domain EN12_11970 PF03872 Anti sigma-E protein RseA, N-terminal domain EN12_11975 PF08281 Sigma-70, region 4 EN12_11975 PF04542 Sigma-70 region 2 EN12_11980 PF00890 FAD binding domain EN12_11980 PF02910 Fumarate reductase flavoprotein C-term EN12_11990 PF03937 Flavinator of succinate dehydrogenase EN12_12005 PF01494 FAD binding domain EN12_12010 PF01494 FAD binding domain EN12_12015 PF03695 Uncharacterised protein family (UPF0149) EN12_12020 PF05164 Cell division protein ZapA EN12_12025 PF01812 5-formyltetrahydrofolate cyclo-ligase family EN12_12030 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EN12_12035 PF01842 ACT domain EN12_12035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EN12_12035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EN12_12040 PF10369 Small subunit of acetolactate synthase EN12_12045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EN12_12045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EN12_12045 PF00205 Thiamine pyrophosphate enzyme, central domain EN12_12050 PF00501 AMP-binding enzyme EN12_12055 PF03466 LysR substrate binding domain EN12_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_12065 PF01569 PAP2 superfamily EN12_12075 PF00682 HMGL-like EN12_12075 PF08502 LeuA allosteric (dimerisation) domain EN12_12080 PF00180 Isocitrate/isopropylmalate dehydrogenase EN12_12085 PF00330 Aconitase family (aconitate hydratase) EN12_12090 PF00694 Aconitase C-terminal domain EN12_12135 PF00072 Response regulator receiver domain EN12_12150 PF03739 Lipopolysaccharide export system permease LptF/LptG EN12_12155 PF03739 Lipopolysaccharide export system permease LptF/LptG EN12_12160 PF02789 Cytosol aminopeptidase family, N-terminal domain EN12_12160 PF00883 Cytosol aminopeptidase family, catalytic domain EN12_12165 PF04364 DNA polymerase III chi subunit, HolC EN12_12170 PF00133 tRNA synthetases class I (I, L, M and V) EN12_12170 PF10458 Valyl tRNA synthetase tRNA binding arm EN12_12170 PF08264 Anticodon-binding domain of tRNA EN12_12175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EN12_12175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EN12_12180 PF00849 RNA pseudouridylate synthase EN12_12185 PF18337 RapA N-terminal Tudor like domain EN12_12185 PF18339 RapA N-terminal Tudor like domain 1 EN12_12185 PF00176 SNF2 family N-terminal domain EN12_12185 PF12137 RNA polymerase recycling family C-terminal EN12_12185 PF00271 Helicase conserved C-terminal domain EN12_12195 PF02562 PhoH-like protein EN12_12195 PF13638 PIN domain EN12_12200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EN12_12200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EN12_12210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EN12_12210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EN12_12215 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain EN12_12215 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain EN12_12220 PF01042 Endoribonuclease L-PSP EN12_12225 PF01553 Acyltransferase EN12_12230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EN12_12235 PF01722 BolA-like protein EN12_12245 PF05494 MlaC protein EN12_12250 PF02470 MlaD protein EN12_12255 PF02405 Permease MlaE EN12_12260 PF00005 ABC transporter EN12_12265 PF01699 Sodium/calcium exchanger protein EN12_12270 PF01380 SIS domain EN12_12270 PF00571 CBS domain EN12_12285 PF03968 OstA-like protein EN12_12290 PF12399 Branched-chain amino acid ATP-binding cassette transporter EN12_12290 PF00005 ABC transporter EN12_12295 PF04552 Sigma-54, DNA binding domain EN12_12295 PF00309 Sigma-54 factor, Activator interacting domain (AID) EN12_12295 PF04963 Sigma-54 factor, core binding domain EN12_12300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EN12_12305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EN12_12310 PF03668 P-loop ATPase protein family EN12_12315 PF00381 PTS HPr component phosphorylation site EN12_12320 PF00571 CBS domain EN12_12320 PF01769 Divalent cation transporter EN12_12320 PF03448 MgtE intracellular N domain EN12_12325 PF01523 Putative modulator of DNA gyrase EN12_12330 PF04751 Protein of unknown function (DUF615) EN12_12335 PF00005 ABC transporter EN12_12340 PF00528 Binding-protein-dependent transport system inner membrane component EN12_12350 PF02441 Flavoprotein EN12_12355 PF08245 Mur ligase middle domain EN12_12355 PF01225 Mur ligase family, catalytic domain EN12_12355 PF02875 Mur ligase family, glutamate ligase domain EN12_12360 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EN12_12365 PF00719 Inorganic pyrophosphatase EN12_12370 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like EN12_12375 PF04357 TamB, inner membrane protein subunit of TAM complex EN12_12380 PF07244 Surface antigen variable number repeat EN12_12380 PF17243 POTRA domain TamA domain 1 EN12_12380 PF01103 Surface antigen EN12_12385 PF01625 Peptide methionine sulfoxide reductase EN12_12390 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) EN12_12395 PF10795 Protein of unknown function (DUF2607) EN12_12405 PF00005 ABC transporter EN12_12430 PF00009 Elongation factor Tu GTP binding domain EN12_12435 PF01507 Phosphoadenosine phosphosulfate reductase family EN12_12440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EN12_12440 PF14824 Sirohaem biosynthesis protein central EN12_12440 PF10414 Sirohaem synthase dimerisation region EN12_12445 PF02872 5'-nucleotidase, C-terminal domain EN12_12445 PF00149 Calcineurin-like phosphoesterase EN12_12455 PF03880 DbpA RNA binding domain EN12_12455 PF00270 DEAD/DEAH box helicase EN12_12455 PF00271 Helicase conserved C-terminal domain EN12_12460 PF13673 Acetyltransferase (GNAT) domain EN12_12465 PF00892 EamA-like transporter family EN12_12470 PF08525 Opacity-associated protein A N-terminal motif EN12_12470 PF04225 Opacity-associated protein A LysM-like domain EN12_12475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EN12_12475 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EN12_12485 PF01196 Ribosomal protein L17 EN12_12490 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EN12_12490 PF01000 RNA polymerase Rpb3/RpoA insert domain EN12_12490 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EN12_12495 PF00163 Ribosomal protein S4/S9 N-terminal domain EN12_12495 PF01479 S4 domain EN12_12500 PF00411 Ribosomal protein S11 EN12_12505 PF00416 Ribosomal protein S13/S18 EN12_12510 PF00444 Ribosomal protein L36 EN12_12515 PF00344 SecY translocase EN12_12520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EN12_12525 PF00327 Ribosomal protein L30p/L7e EN12_12530 PF03719 Ribosomal protein S5, C-terminal domain EN12_12530 PF00333 Ribosomal protein S5, N-terminal domain EN12_12535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EN12_12540 PF00347 Ribosomal protein L6 EN12_12545 PF00410 Ribosomal protein S8 EN12_12550 PF00253 Ribosomal protein S14p/S29e EN12_12555 PF00673 ribosomal L5P family C-terminus EN12_12555 PF00281 Ribosomal protein L5 EN12_12560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EN12_12560 PF00467 KOW motif EN12_12565 PF00238 Ribosomal protein L14p/L23e EN12_12570 PF00366 Ribosomal protein S17 EN12_12575 PF00831 Ribosomal L29 protein EN12_12580 PF00252 Ribosomal protein L16p/L10e EN12_12585 PF07650 KH domain EN12_12585 PF00189 Ribosomal protein S3, C-terminal domain EN12_12590 PF00237 Ribosomal protein L22p/L17e EN12_12595 PF00203 Ribosomal protein S19 EN12_12600 PF00181 Ribosomal Proteins L2, RNA binding domain EN12_12600 PF03947 Ribosomal Proteins L2, C-terminal domain EN12_12605 PF00276 Ribosomal protein L23 EN12_12610 PF00573 Ribosomal protein L4/L1 family EN12_12615 PF00297 Ribosomal protein L3 EN12_12620 PF00338 Ribosomal protein S10p/S20e EN12_12625 PF08032 RNA 2'-O ribose methyltransferase substrate binding EN12_12625 PF00588 SpoU rRNA Methylase family EN12_12630 PF00575 S1 RNA binding domain EN12_12630 PF17876 Cold shock domain EN12_12630 PF00773 RNB domain EN12_12630 PF08206 Ribonuclease B OB domain EN12_12630 PF08461 Ribonuclease R winged-helix domain EN12_12635 PF11893 Domain of unknown function (DUF3413) EN12_12635 PF00884 Sulfatase EN12_12640 PF08238 Sel1 repeat EN12_12645 PF00709 Adenylosuccinate synthetase EN12_12650 PF01112 Asparaginase EN12_12655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EN12_12665 PF00999 Sodium/hydrogen exchanger family EN12_12665 PF02254 TrkA-N domain EN12_12670 PF02525 Flavodoxin-like fold EN12_12675 PF00005 ABC transporter EN12_12675 PF12848 ABC transporter EN12_12685 PF00561 alpha/beta hydrolase fold EN12_12690 PF06794 Uncharacterised protein family (UPF0270) EN12_12695 PF00485 Phosphoribulokinase / Uridine kinase family EN12_12700 PF00027 Cyclic nucleotide-binding domain EN12_12700 PF13545 Crp-like helix-turn-helix domain EN12_12710 PF00171 Aldehyde dehydrogenase family EN12_12715 PF04958 Arginine N-succinyltransferase beta subunit EN12_12720 PF00202 Aminotransferase class-III EN12_12725 PF00117 Glutamine amidotransferase class-I EN12_12730 PF04055 Radical SAM superfamily EN12_12730 PF00919 Uncharacterized protein family UPF0004 EN12_12730 PF18693 TRAM domain EN12_12745 PF00579 tRNA synthetases class I (W and Y) EN12_12750 PF13419 Haloacid dehalogenase-like hydrolase EN12_12755 PF00834 Ribulose-phosphate 3 epimerase family EN12_12760 PF02086 D12 class N6 adenine-specific DNA methyltransferase EN12_12770 PF01761 3-dehydroquinate synthase EN12_12775 PF01202 Shikimate kinase EN12_12780 PF03958 Bacterial type II/III secretion system short domain EN12_12780 PF00263 Bacterial type II and III secretion system protein EN12_12780 PF11741 AMIN domain EN12_12780 PF07660 Secretin and TonB N terminus short domain EN12_12805 PF00912 Transglycosylase EN12_12805 PF17092 Penicillin-binding protein OB-like domain EN12_12805 PF00905 Penicillin binding protein transpeptidase domain EN12_12810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_12810 PF03466 LysR substrate binding domain EN12_12815 PF08534 Redoxin EN12_12815 PF00462 Glutaredoxin EN12_12820 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_12820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EN12_12830 PF14698 Argininosuccinate lyase C-terminal EN12_12830 PF00206 Lyase EN12_12835 PF00764 Arginosuccinate synthase EN12_12840 PF00696 Amino acid kinase family EN12_12845 PF02774 Semialdehyde dehydrogenase, dimerisation domain EN12_12845 PF01118 Semialdehyde dehydrogenase, NAD binding domain EN12_12850 PF01546 Peptidase family M20/M25/M40 EN12_12850 PF07687 Peptidase dimerisation domain EN12_12855 PF00311 Phosphoenolpyruvate carboxylase EN12_12865 PF06426 Serine acetyltransferase, N-terminal EN12_12865 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_12870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EN12_12870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EN12_12875 PF02556 Preprotein translocase subunit SecB EN12_12880 PF00581 Rhodanese-like domain EN12_12885 PF00152 tRNA synthetases class II (D, K and N) EN12_12890 PF02910 Fumarate reductase flavoprotein C-term EN12_12890 PF00890 FAD binding domain EN12_12895 PF13183 4Fe-4S dicluster domain EN12_12895 PF13085 2Fe-2S iron-sulfur cluster binding domain EN12_12900 PF02300 Fumarate reductase subunit C EN12_12905 PF02313 Fumarate reductase subunit D EN12_12910 PF09285 Elongation factor P, C-terminal EN12_12910 PF01132 Elongation factor P (EF-P) OB domain EN12_12910 PF08207 Elongation factor P (EF-P) KOW-like domain EN12_12915 PF04055 Radical SAM superfamily EN12_12925 PF00118 TCP-1/cpn60 chaperonin family EN12_12930 PF00166 Chaperonin 10 Kd subunit EN12_12935 PF00455 DeoR C terminal sensor domain EN12_12935 PF08220 DeoR-like helix-turn-helix domain EN12_12955 PF00121 Triosephosphate isomerase EN12_12965 PF03737 Aldolase/RraA EN12_12970 PF01040 UbiA prenyltransferase family EN12_12975 PF00004 ATPase family associated with various cellular activities (AAA) EN12_12975 PF07724 AAA domain (Cdc48 subfamily) EN12_12975 PF10431 C-terminal, D2-small domain, of ClpB protein EN12_12980 PF00227 Proteasome subunit EN12_12985 PF05036 Sporulation related domain EN12_12990 PF00356 Bacterial regulatory proteins, lacI family EN12_12995 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EN12_12995 PF00270 DEAD/DEAH box helicase EN12_12995 PF18074 Primosomal protein N C-terminal domain EN12_12995 PF17764 3′ DNA-binding domain (3′BD) EN12_12995 PF00271 Helicase conserved C-terminal domain EN12_13000 PF01197 Ribosomal protein L31 EN12_13005 PF03949 Malic enzyme, NAD binding domain EN12_13005 PF00390 Malic enzyme, N-terminal domain EN12_13010 PF01340 Met Apo-repressor, MetJ EN12_13015 PF01053 Cys/Met metabolism PLP-dependent enzyme EN12_13020 PF03447 Homoserine dehydrogenase, NAD binding domain EN12_13020 PF00742 Homoserine dehydrogenase EN12_13020 PF00696 Amino acid kinase family EN12_13030 PF02219 Methylenetetrahydrofolate reductase EN12_13035 PF06005 Cell division protein ZapB EN12_13040 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EN12_13045 PF00365 Phosphofructokinase EN12_13050 PF01545 Cation efflux family EN12_13050 PF16916 Dimerisation domain of Zinc Transporter EN12_13060 PF00072 Response regulator receiver domain EN12_13060 PF00486 Transcriptional regulatory protein, C terminal EN12_13065 PF00672 HAMP domain EN12_13065 PF00512 His Kinase A (phospho-acceptor) domain EN12_13065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_13065 PF16527 Two-component sensor protein CpxA, periplasmic domain EN12_13070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EN12_13070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EN12_13075 PF00588 SpoU rRNA Methylase family EN12_13080 PF04186 FxsA cytoplasmic membrane protein EN12_13085 PF17158 Membrane-associated sensor, integral membrane domain EN12_13085 PF00990 Diguanylate cyclase, GGDEF domain EN12_13090 PF10415 Fumarase C C-terminus EN12_13090 PF00206 Lyase EN12_13095 PF03605 Anaerobic c4-dicarboxylate membrane transporter EN12_13105 PF17967 Pullulanase N2 domain EN12_13105 PF18494 Pullulanase Ins domain EN12_13105 PF03714 Bacterial pullanase-associated domain EN12_13105 PF11852 Domain of unknown function (DUF3372) EN12_13105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EN12_13110 PF02683 Cytochrome C biogenesis protein transmembrane region EN12_13110 PF11412 Disulphide bond corrector protein DsbC EN12_13115 PF00196 Bacterial regulatory proteins, luxR family EN12_13115 PF00072 Response regulator receiver domain EN12_13120 PF02080 TrkA-C domain EN12_13120 PF03471 Transporter associated domain EN12_13120 PF00999 Sodium/hydrogen exchanger family EN12_13130 PF00474 Sodium:solute symporter family EN12_13135 PF02592 Putative vitamin uptake transporter EN12_13140 PF00625 Guanylate kinase EN12_13145 PF01192 RNA polymerase Rpb6 EN12_13150 PF04607 Region found in RelA / SpoT proteins EN12_13150 PF02824 TGS domain EN12_13150 PF13291 ACT domain EN12_13155 PF17191 RecG wedge domain EN12_13155 PF00271 Helicase conserved C-terminal domain EN12_13155 PF00270 DEAD/DEAH box helicase EN12_13160 PF00860 Permease family EN12_13165 PF00512 His Kinase A (phospho-acceptor) domain EN12_13165 PF00672 HAMP domain EN12_13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_13170 PF00072 Response regulator receiver domain EN12_13170 PF00486 Transcriptional regulatory protein, C terminal EN12_13175 PF03449 Transcription elongation factor, N-terminal EN12_13175 PF01272 Transcription elongation factor, GreA/GreB, C-term EN12_13180 PF00575 S1 RNA binding domain EN12_13180 PF17674 HHH domain EN12_13180 PF09371 Tex-like protein N-terminal domain EN12_13180 PF16921 Tex protein YqgF-like domain EN12_13190 PF00561 alpha/beta hydrolase fold EN12_13195 PF00156 Phosphoribosyl transferase domain EN12_13200 PF01521 Iron-sulphur cluster biosynthesis EN12_13200 PF01106 NifU-like domain EN12_13205 PF00293 NUDIX domain EN12_13210 PF00459 Inositol monophosphatase family EN12_13215 PF01203 Type II secretion system (T2SS), protein N EN12_13220 PF04612 Type II secretion system (T2SS), protein M EN12_13225 PF05134 Type II secretion system (T2SS), protein L EN12_13225 PF12693 GspL periplasmic domain EN12_13230 PF03934 Type II secretion system (T2SS), protein K EN12_13235 PF11612 Type II secretion system (T2SS), protein J EN12_13235 PF07963 Prokaryotic N-terminal methylation motif EN12_13240 PF07963 Prokaryotic N-terminal methylation motif EN12_13240 PF02501 Type II secretion system (T2SS), protein I EN12_13245 PF12019 Type II transport protein GspH EN12_13250 PF07963 Prokaryotic N-terminal methylation motif EN12_13250 PF08334 Type II secretion system (T2SS), protein G EN12_13255 PF00482 Type II secretion system (T2SS), protein F EN12_13260 PF00437 Type II/IV secretion system protein EN12_13265 PF00263 Bacterial type II and III secretion system protein EN12_13265 PF03958 Bacterial type II/III secretion system short domain EN12_13270 PF11356 Type II secretion system protein C EN12_13275 PF01479 S4 domain EN12_13280 PF01430 Hsp33 protein EN12_13285 PF01293 Phosphoenolpyruvate carboxykinase EN12_13295 PF09500 Putative thioesterase (yiiD_Cterm) EN12_13295 PF00583 Acetyltransferase (GNAT) family EN12_13300 PF02580 D-Tyr-tRNA(Tyr) deacylase EN12_13305 PF03631 Virulence factor BrkB EN12_13325 PF00120 Glutamine synthetase, catalytic domain EN12_13325 PF03951 Glutamine synthetase, beta-Grasp domain EN12_13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_13340 PF00989 PAS fold EN12_13340 PF00512 His Kinase A (phospho-acceptor) domain EN12_13345 PF02954 Bacterial regulatory protein, Fis family EN12_13345 PF00072 Response regulator receiver domain EN12_13345 PF00158 Sigma-54 interaction domain EN12_13350 PF00990 Diguanylate cyclase, GGDEF domain EN12_13350 PF00563 EAL domain EN12_13350 PF03707 Bacterial signalling protein N terminal repeat EN12_13350 PF13188 PAS domain EN12_13355 PF00962 Adenosine/AMP deaminase EN12_13390 PF01177 Asp/Glu/Hydantoin racemase EN12_13395 PF00082 Subtilase family EN12_13395 PF04151 Bacterial pre-peptidase C-terminal domain EN12_13395 PF05922 Peptidase inhibitor I9 EN12_13400 PF07715 TonB-dependent Receptor Plug Domain EN12_13400 PF00593 TonB dependent receptor EN12_13405 PF05958 tRNA (Uracil-5-)-methyltransferase EN12_13415 PF00440 Bacterial regulatory proteins, tetR family EN12_13420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EN12_13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_13425 PF04542 Sigma-70 region 2 EN12_13425 PF04545 Sigma-70, region 4 EN12_13425 PF00140 Sigma-70 factor, region 1.2 EN12_13430 PF18075 FtsX extracellular domain EN12_13435 PF00005 ABC transporter EN12_13440 PF00448 SRP54-type protein, GTPase domain EN12_13440 PF02881 SRP54-type protein, helical bundle domain EN12_13480 PF00210 Ferritin-like domain EN12_13485 PF00563 EAL domain EN12_13485 PF08668 HDOD domain EN12_13490 PF01810 LysE type translocator EN12_13495 PF12146 Serine aminopeptidase, S33 EN12_13515 PF00563 EAL domain EN12_13515 PF08495 FIST N domain EN12_13515 PF10442 FIST C domain EN12_13515 PF00990 Diguanylate cyclase, GGDEF domain EN12_13520 PF13419 Haloacid dehalogenase-like hydrolase EN12_13525 PF00589 Phage integrase family EN12_13525 PF02899 Phage integrase, N-terminal SAM-like domain EN12_13530 PF04340 Protein of unknown function, DUF484 EN12_13535 PF01678 Diaminopimelate epimerase EN12_13540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EN12_13540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EN12_13550 PF01491 Frataxin-like domain EN12_13555 PF12633 Adenylate cyclase NT domain EN12_13555 PF01295 Adenylate cyclase, class-I EN12_13565 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EN12_13565 PF03900 Porphobilinogen deaminase, C-terminal domain EN12_13570 PF02602 Uroporphyrinogen-III synthase HemD EN12_13575 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EN12_13580 PF07219 HemY protein N-terminus EN12_13585 PF06969 HemN C-terminal domain EN12_13585 PF04055 Radical SAM superfamily EN12_13590 PF10675 Protein of unknown function (DUF2489) EN12_13595 PF04220 Der GTPase activator (YihI) EN12_13605 PF00034 Cytochrome c EN12_13610 PF01926 50S ribosome-binding GTPase EN12_13615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EN12_13615 PF01612 3'-5' exonuclease EN12_13615 PF00476 DNA polymerase family A EN12_13615 PF01367 5'-3' exonuclease, C-terminal SAM fold EN12_13625 PF00490 Delta-aminolevulinic acid dehydratase EN12_13630 PF01026 TatD related DNase EN12_13635 PF00581 Rhodanese-like domain EN12_13640 PF01694 Rhomboid family EN12_13640 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EN12_13645 PF00672 HAMP domain EN12_13645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_13645 PF02203 Tar ligand binding domain homologue EN12_13650 PF03748 Flagellar basal body-associated protein FliL EN12_13655 PF04345 Chorismate lyase EN12_13660 PF01040 UbiA prenyltransferase family EN12_13665 PF01553 Acyltransferase EN12_13670 PF00717 Peptidase S24-like EN12_13670 PF01726 LexA DNA binding domain EN12_13680 PF01554 MatE EN12_13685 PF03150 Di-haem cytochrome c peroxidase EN12_13685 PF00034 Cytochrome c EN12_13690 PF00902 Sec-independent protein translocase protein (TatC) EN12_13695 PF02416 mttA/Hcf106 family EN12_13700 PF02416 mttA/Hcf106 family EN12_13705 PF03109 ABC1 family EN12_13710 PF02036 SCP-2 sterol transfer family EN12_13715 PF01209 ubiE/COQ5 methyltransferase family EN12_13720 PF02646 RmuC family EN12_13735 PF10625 Universal stress protein B (UspB) EN12_13740 PF00210 Ferritin-like domain EN12_13745 PF00582 Universal stress protein family EN12_13750 PF00892 EamA-like transporter family EN12_13760 PF04445 Putative SAM-dependent methyltransferase EN12_13765 PF00990 Diguanylate cyclase, GGDEF domain EN12_13765 PF00563 EAL domain EN12_13765 PF08448 PAS fold EN12_13770 PF01037 Lrp/AsnC ligand binding domain EN12_13780 PF07690 Major Facilitator Superfamily EN12_13785 PF03466 LysR substrate binding domain EN12_13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_13790 PF01321 Creatinase/Prolidase N-terminal domain EN12_13790 PF00557 Metallopeptidase family M24 EN12_13790 PF00557 Metallopeptidase family M24 EN12_13790 PF01321 Creatinase/Prolidase N-terminal domain EN12_13795 PF04055 Radical SAM superfamily EN12_13795 PF06968 Biotin and Thiamin Synthesis associated domain EN12_13800 PF05690 Thiazole biosynthesis protein ThiG EN12_13805 PF02597 ThiS family EN12_13810 PF00899 ThiF family EN12_13815 PF02581 Thiamine monophosphate synthase EN12_13820 PF13667 ThiC-associated domain EN12_13820 PF01964 Radical SAM ThiC family EN12_13825 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EN12_13865 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_13875 PF01488 Shikimate / quinate 5-dehydrogenase EN12_13875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EN12_13875 PF08501 Shikimate dehydrogenase substrate binding domain EN12_13880 PF01218 Coproporphyrinogen III oxidase EN12_13885 PF01300 Telomere recombination EN12_13890 PF00731 AIR carboxylase EN12_13895 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EN12_13895 PF02222 ATP-grasp domain EN12_13900 PF01396 Topoisomerase DNA binding C4 zinc finger EN12_13905 PF04361 Protein of unknown function (DUF494) EN12_13910 PF02481 DNA recombination-mediator protein A EN12_13910 PF17782 DprA winged helix domain EN12_13915 PF01476 LysM domain EN12_13920 PF01327 Polypeptide deformylase EN12_13925 PF02911 Formyl transferase, C-terminal domain EN12_13925 PF00551 Formyl transferase EN12_13930 PF01189 16S rRNA methyltransferase RsmB/F EN12_13930 PF01029 NusB family EN12_13935 PF02254 TrkA-N domain EN12_13935 PF02080 TrkA-C domain EN12_13940 PF02386 Cation transport protein EN12_13950 PF03006 Haemolysin-III related EN12_13955 PF07070 SpoOM protein EN12_13965 PF06288 Protein of unknown function (DUF1040) EN12_13970 PF13746 4Fe-4S dicluster domain EN12_13970 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EN12_13970 PF12801 4Fe-4S binding domain EN12_13975 PF01636 Phosphotransferase enzyme family EN12_13980 PF01323 DSBA-like thioredoxin domain EN12_13985 PF01553 Acyltransferase EN12_13990 PF01078 Magnesium chelatase, subunit ChlI EN12_13990 PF13335 Magnesium chelatase, subunit ChlI C-terminal EN12_13995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EN12_13995 PF00205 Thiamine pyrophosphate enzyme, central domain EN12_13995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EN12_14005 PF01063 Amino-transferase class IV EN12_14010 PF00920 Dehydratase family EN12_14015 PF00291 Pyridoxal-phosphate dependent enzyme EN12_14015 PF00585 C-terminal regulatory domain of Threonine dehydratase EN12_14020 PF08240 Alcohol dehydrogenase GroES-like domain EN12_14020 PF00107 Zinc-binding dehydrogenase EN12_14030 PF01206 Sulfurtransferase TusA EN12_14040 PF01169 Uncharacterized protein family UPF0016 EN12_14045 PF02091 Glycyl-tRNA synthetase alpha subunit EN12_14050 PF05746 DALR anticodon binding domain EN12_14050 PF02092 Glycyl-tRNA synthetase beta subunit EN12_14055 PF00155 Aminotransferase class I and II EN12_14060 PF00011 Hsp20/alpha crystallin family EN12_14075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_14075 PF18053 DNA gyrase B subunit insert domain EN12_14075 PF01751 Toprim domain EN12_14075 PF00986 DNA gyrase B subunit, carboxyl terminus EN12_14075 PF00204 DNA gyrase B EN12_14080 PF02463 RecF/RecN/SMC N terminal domain EN12_14085 PF02767 DNA polymerase III beta subunit, central domain EN12_14085 PF02768 DNA polymerase III beta subunit, C-terminal domain EN12_14085 PF00712 DNA polymerase III beta subunit, N-terminal domain EN12_14090 PF00308 Bacterial dnaA protein EN12_14090 PF11638 DnaA N-terminal domain EN12_14090 PF08299 Bacterial dnaA protein helix-turn-helix EN12_14125 PF01709 Transcriptional regulator EN12_14130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EN12_14130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EN12_14135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_14135 PF00672 HAMP domain EN12_14135 PF17200 Single Cache domain 2 EN12_14140 PF10928 Protein of unknown function (DUF2810) EN12_14145 PF00196 Bacterial regulatory proteins, luxR family EN12_14145 PF17874 MalT-like TPR region EN12_14150 PF00343 Carbohydrate phosphorylase EN12_14155 PF02446 4-alpha-glucanotransferase EN12_14160 PF00128 Alpha amylase, catalytic domain EN12_14160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EN12_14160 PF02806 Alpha amylase, C-terminal all-beta domain EN12_14165 PF05638 Type VI secretion system effector, Hcp EN12_14170 PF16671 Actin cross-linking domain EN12_14170 PF04717 Type VI secretion system, phage-baseplate injector EN12_14195 PF01757 Acyltransferase family EN12_14195 PF01168 Alanine racemase, N-terminal domain EN12_14195 PF00842 Alanine racemase, C-terminal domain EN12_14205 PF00939 Sodium:sulfate symporter transmembrane region EN12_14210 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) EN12_14215 PF08329 Chitinase A, N-terminal domain EN12_14215 PF00704 Glycosyl hydrolases family 18 EN12_14235 PF00672 HAMP domain EN12_14235 PF02743 Cache domain EN12_14235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_14255 PF01569 PAP2 superfamily EN12_14260 PF00375 Sodium:dicarboxylate symporter family EN12_14270 PF02630 SCO1/SenC EN12_14285 PF03616 Sodium/glutamate symporter EN12_14290 PF07238 PilZ domain EN12_14290 PF12945 Flagellar protein YcgR EN12_14305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EN12_14305 PF00529 HlyD membrane-fusion protein of T1SS EN12_14310 PF11742 Protein of unknown function (DUF3302) EN12_14315 PF00990 Diguanylate cyclase, GGDEF domain EN12_14330 PF01048 Phosphorylase superfamily EN12_14335 PF08349 Protein of unknown function (DUF1722) EN12_14340 PF13411 MerR HTH family regulatory protein EN12_14345 PF03441 FAD binding domain of DNA photolyase EN12_14345 PF00875 DNA photolyase EN12_14350 PF03734 L,D-transpeptidase catalytic domain EN12_14350 PF01476 LysM domain EN12_14350 PF17969 L,D-transpeptidase C-terminal domain EN12_14360 PF00271 Helicase conserved C-terminal domain EN12_14360 PF00270 DEAD/DEAH box helicase EN12_14365 PF00326 Prolyl oligopeptidase family EN12_14365 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EN12_14370 PF07715 TonB-dependent Receptor Plug Domain EN12_14370 PF00593 TonB dependent receptor EN12_14390 PF12729 Four helix bundle sensory module for signal transduction EN12_14390 PF00672 HAMP domain EN12_14390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_14395 PF12849 PBP superfamily domain EN12_14400 PF00528 Binding-protein-dependent transport system inner membrane component EN12_14405 PF00528 Binding-protein-dependent transport system inner membrane component EN12_14410 PF00005 ABC transporter EN12_14415 PF03707 Bacterial signalling protein N terminal repeat EN12_14415 PF00990 Diguanylate cyclase, GGDEF domain EN12_14415 PF00563 EAL domain EN12_14430 PF00916 Sulfate permease family EN12_14430 PF01740 STAS domain EN12_14440 PF01551 Peptidase family M23 EN12_14440 PF01476 LysM domain EN12_14440 PF08525 Opacity-associated protein A N-terminal motif EN12_14445 PF03707 Bacterial signalling protein N terminal repeat EN12_14445 PF00563 EAL domain EN12_14445 PF00990 Diguanylate cyclase, GGDEF domain EN12_14445 PF13188 PAS domain EN12_14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_14450 PF03466 LysR substrate binding domain EN12_14455 PF07690 Major Facilitator Superfamily EN12_14460 PF09278 MerR, DNA binding EN12_14460 PF00376 MerR family regulatory protein EN12_14480 PF00375 Sodium:dicarboxylate symporter family EN12_14490 PF02001 Protein of unknown function DUF134 EN12_14515 PF01447 Thermolysin metallopeptidase, catalytic domain EN12_14515 PF07504 Fungalysin/Thermolysin Propeptide Motif EN12_14515 PF01483 Proprotein convertase P-domain EN12_14515 PF02868 Thermolysin metallopeptidase, alpha-helical domain EN12_14525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EN12_14525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EN12_14530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EN12_14530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EN12_14535 PF00581 Rhodanese-like domain EN12_14540 PF00563 EAL domain EN12_14540 PF00196 Bacterial regulatory proteins, luxR family EN12_14545 PF13419 Haloacid dehalogenase-like hydrolase EN12_14550 PF00916 Sulfate permease family EN12_14550 PF01740 STAS domain EN12_14555 PF00849 RNA pseudouridylate synthase EN12_14615 PF07724 AAA domain (Cdc48 subfamily) EN12_14615 PF10431 C-terminal, D2-small domain, of ClpB protein EN12_14615 PF17871 AAA lid domain EN12_14615 PF00004 ATPase family associated with various cellular activities (AAA) EN12_14645 PF04717 Type VI secretion system, phage-baseplate injector EN12_14645 PF16671 Actin cross-linking domain EN12_14660 PF05025 RbsD / FucU transport protein family EN12_14665 PF00005 ABC transporter EN12_14670 PF02653 Branched-chain amino acid transport system / permease component EN12_14675 PF13407 Periplasmic binding protein domain EN12_14680 PF00294 pfkB family carbohydrate kinase EN12_14685 PF00356 Bacterial regulatory proteins, lacI family EN12_14690 PF04973 Nicotinamide mononucleotide transporter EN12_14695 PF04973 Nicotinamide mononucleotide transporter EN12_14700 PF01048 Phosphorylase superfamily EN12_14710 PF03009 Glycerophosphoryl diester phosphodiesterase family EN12_14715 PF07690 Major Facilitator Superfamily EN12_14730 PF02743 Cache domain EN12_14730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_14730 PF00512 His Kinase A (phospho-acceptor) domain EN12_14735 PF02954 Bacterial regulatory protein, Fis family EN12_14735 PF00158 Sigma-54 interaction domain EN12_14735 PF00072 Response regulator receiver domain EN12_14755 PF01266 FAD dependent oxidoreductase EN12_14760 PF00041 Fibronectin type III domain EN12_14760 PF12561 ToxR activated gene A lipoprotein domain EN12_14765 PF01327 Polypeptide deformylase EN12_14775 PF03334 Na+/H+ antiporter subunit EN12_14780 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EN12_14800 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EN12_14800 PF00361 Proton-conducting membrane transporter EN12_14800 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EN12_14800 PF13244 Domain of unknown function (DUF4040) EN12_14810 PF00582 Universal stress protein family EN12_14815 PF03222 Tryptophan/tyrosine permease family EN12_14820 PF01212 Beta-eliminating lyase EN12_14825 PF12843 Putative quorum-sensing-regulated virulence factor EN12_14840 PF00990 Diguanylate cyclase, GGDEF domain EN12_14840 PF08448 PAS fold EN12_14840 PF00563 EAL domain EN12_14845 PF00313 'Cold-shock' DNA-binding domain EN12_14860 PF07584 Aerotolerance regulator N-terminal EN12_14860 PF13519 von Willebrand factor type A domain EN12_14875 PF01882 Protein of unknown function DUF58 EN12_14880 PF17863 AAA lid domain EN12_14880 PF07726 ATPase family associated with various cellular activities (AAA) EN12_14885 PF00672 HAMP domain EN12_14885 PF02743 Cache domain EN12_14885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_14900 PF07670 Nucleoside recognition EN12_14900 PF01773 Na+ dependent nucleoside transporter N-terminus EN12_14900 PF07662 Na+ dependent nucleoside transporter C-terminus EN12_14905 PF01546 Peptidase family M20/M25/M40 EN12_14905 PF07687 Peptidase dimerisation domain EN12_14915 PF00158 Sigma-54 interaction domain EN12_14915 PF01590 GAF domain EN12_14920 PF00175 Oxidoreductase NAD-binding domain EN12_14920 PF00970 Oxidoreductase FAD-binding domain EN12_14920 PF00042 Globin EN12_14925 PF00313 'Cold-shock' DNA-binding domain EN12_14930 PF03889 Alternative ribosome-rescue factor A EN12_14950 PF00072 Response regulator receiver domain EN12_14960 PF03853 YjeF-related protein N-terminus EN12_14960 PF01256 Carbohydrate kinase EN12_14965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EN12_14965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EN12_14975 PF07885 Ion channel EN12_14985 PF00478 IMP dehydrogenase / GMP reductase domain EN12_14990 PF00145 C-5 cytosine-specific DNA methylase EN12_15010 PF01797 Transposase IS200 like EN12_15015 PF00270 DEAD/DEAH box helicase EN12_15015 PF00271 Helicase conserved C-terminal domain EN12_15020 PF03605 Anaerobic c4-dicarboxylate membrane transporter EN12_15025 PF02540 NAD synthase EN12_15030 PF01467 Cytidylyltransferase-like EN12_15035 PF11849 Domain of unknown function (DUF3369) EN12_15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_15040 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_15040 PF00512 His Kinase A (phospho-acceptor) domain EN12_15050 PF03553 Na+/H+ antiporter family EN12_15055 PF07690 Major Facilitator Superfamily EN12_15065 PF00990 Diguanylate cyclase, GGDEF domain EN12_15065 PF08448 PAS fold EN12_15070 PF00657 GDSL-like Lipase/Acylhydrolase EN12_15075 PF16458 Beta-prism lectin EN12_15075 PF12563 Hemolytic toxin N terminal EN12_15075 PF07968 Leukocidin/Hemolysin toxin family EN12_15080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_15080 PF00672 HAMP domain EN12_15080 PF12729 Four helix bundle sensory module for signal transduction EN12_15085 PF00561 alpha/beta hydrolase fold EN12_15090 PF03280 Proteobacterial lipase chaperone protein EN12_15095 PF05547 Immune inhibitor A peptidase M6 EN12_15095 PF00801 PKD domain EN12_15115 PF01032 FecCD transport family EN12_15120 PF01032 FecCD transport family EN12_15125 PF00005 ABC transporter EN12_15130 PF12833 Helix-turn-helix domain EN12_15135 PF00593 TonB dependent receptor EN12_15135 PF07715 TonB-dependent Receptor Plug Domain EN12_15145 PF00871 Acetokinase family EN12_15160 PF00672 HAMP domain EN12_15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_15160 PF00512 His Kinase A (phospho-acceptor) domain EN12_15165 PF00072 Response regulator receiver domain EN12_15165 PF00486 Transcriptional regulatory protein, C terminal EN12_15180 PF01261 Xylose isomerase-like TIM barrel EN12_15185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EN12_15195 PF00596 Class II Aldolase and Adducin N-terminal domain EN12_15200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EN12_15205 PF03611 PTS system sugar-specific permease component EN12_15210 PF00455 DeoR C terminal sensor domain EN12_15210 PF08220 DeoR-like helix-turn-helix domain EN12_15220 PF01292 Prokaryotic cytochrome b561 EN12_15225 PF00128 Alpha amylase, catalytic domain EN12_15230 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_15245 PF00486 Transcriptional regulatory protein, C terminal EN12_15245 PF00072 Response regulator receiver domain EN12_15250 PF14827 Double sensory domain of two-component sensor kinase EN12_15250 PF00512 His Kinase A (phospho-acceptor) domain EN12_15250 PF00672 HAMP domain EN12_15250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_15250 PF13426 PAS domain EN12_15290 PF07690 Major Facilitator Superfamily EN12_15295 PF02743 Cache domain EN12_15295 PF00672 HAMP domain EN12_15295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_15305 PF07943 Penicillin-binding protein 5, C-terminal domain EN12_15305 PF00768 D-alanyl-D-alanine carboxypeptidase EN12_15320 PF00194 Eukaryotic-type carbonic anhydrase EN12_15325 PF01797 Transposase IS200 like EN12_15330 PF02347 Glycine cleavage system P-protein EN12_15335 PF01597 Glycine cleavage H-protein EN12_15340 PF00464 Serine hydroxymethyltransferase EN12_15350 PF08669 Glycine cleavage T-protein C-terminal barrel domain EN12_15350 PF01571 Aminomethyltransferase folate-binding domain EN12_15360 PF01609 Transposase DDE domain EN12_15360 PF05598 Transposase domain (DUF772) EN12_15385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EN12_15385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EN12_15385 PF02824 TGS domain EN12_15385 PF03129 Anticodon binding domain EN12_15390 PF05198 Translation initiation factor IF-3, N-terminal domain EN12_15390 PF00707 Translation initiation factor IF-3, C-terminal domain EN12_15395 PF01632 Ribosomal protein L35 EN12_15400 PF00453 Ribosomal protein L20 EN12_15405 PF13495 Phage integrase, N-terminal SAM-like domain EN12_15405 PF00589 Phage integrase family EN12_15430 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_15475 PF01966 HD domain EN12_15475 PF13286 Phosphohydrolase-associated domain EN12_15500 PF00293 NUDIX domain EN12_15505 PF13302 Acetyltransferase (GNAT) domain EN12_15510 PF08212 Lipocalin-like domain EN12_15535 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ EN12_15545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_15590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_15620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_15635 PF08212 Lipocalin-like domain EN12_15665 PF08212 Lipocalin-like domain EN12_15680 PF04229 GrpB protein EN12_15685 PF01810 LysE type translocator EN12_15720 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH EN12_15770 PF00665 Integrase core domain EN12_15775 PF01527 Transposase EN12_15885 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB EN12_15890 PF01381 Helix-turn-helix EN12_15905 PF17676 LD-carboxypeptidase C-terminal domain EN12_15905 PF02016 LD-carboxypeptidase N-terminal domain EN12_15910 PF02016 LD-carboxypeptidase N-terminal domain EN12_15910 PF17676 LD-carboxypeptidase C-terminal domain EN12_15930 PF08212 Lipocalin-like domain EN12_15935 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EN12_15955 PF01555 DNA methylase EN12_15995 PF12833 Helix-turn-helix domain EN12_15995 PF01965 DJ-1/PfpI family EN12_16020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_16040 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system EN12_16045 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA EN12_16060 PF05598 Transposase domain (DUF772) EN12_16060 PF01609 Transposase DDE domain EN12_16080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_16090 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EN12_16150 PF07859 alpha/beta hydrolase fold EN12_16165 PF01797 Transposase IS200 like EN12_16225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_16230 PF01527 Transposase EN12_16235 PF00665 Integrase core domain EN12_16250 PF13597 Anaerobic ribonucleoside-triphosphate reductase EN12_16250 PF03477 ATP cone domain EN12_16260 PF00155 Aminotransferase class I and II EN12_16265 PF18030 RimK PreATP-grasp domain EN12_16265 PF08443 RimK-like ATP-grasp domain EN12_16275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EN12_16275 PF02378 Phosphotransferase system, EIIC EN12_16280 PF00294 pfkB family carbohydrate kinase EN12_16285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EN12_16285 PF00381 PTS HPr component phosphorylation site EN12_16290 PF00356 Bacterial regulatory proteins, lacI family EN12_16290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EN12_16295 PF00149 Calcineurin-like phosphoesterase EN12_16295 PF12320 Type 5 capsule protein repressor C-terminal domain EN12_16300 PF13476 AAA domain EN12_16305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_16305 PF00072 Response regulator receiver domain EN12_16310 PF00155 Aminotransferase class I and II EN12_16320 PF00654 Voltage gated chloride channel EN12_16325 PF07683 Cobalamin synthesis protein cobW C-terminal domain EN12_16325 PF02492 CobW/HypB/UreG, nucleotide-binding domain EN12_16330 PF01926 50S ribosome-binding GTPase EN12_16335 PF02705 K+ potassium transporter EN12_16340 PF10371 Domain of unknown function EN12_16340 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EN12_16340 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EN12_16340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EN12_16340 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EN12_16345 PF02702 Osmosensitive K+ channel His kinase sensor domain EN12_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_16345 PF00512 His Kinase A (phospho-acceptor) domain EN12_16345 PF13493 Domain of unknown function (DUF4118) EN12_16350 PF00486 Transcriptional regulatory protein, C terminal EN12_16350 PF00072 Response regulator receiver domain EN12_16355 PF02416 mttA/Hcf106 family EN12_16360 PF09335 SNARE associated Golgi protein EN12_16370 PF10388 EAL-domain associated signalling protein domain EN12_16370 PF00563 EAL domain EN12_16380 PF01292 Prokaryotic cytochrome b561 EN12_16385 PF04264 YceI-like domain EN12_16390 PF01226 Formate/nitrite transporter EN12_16395 PF03466 LysR substrate binding domain EN12_16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_16400 PF06496 Protein of unknown function (DUF1097) EN12_16405 PF11398 Protein of unknown function (DUF2813) EN12_16410 PF02872 5'-nucleotidase, C-terminal domain EN12_16410 PF00149 Calcineurin-like phosphoesterase EN12_16415 PF03741 Integral membrane protein TerC family EN12_16425 PF03831 PhnA domain EN12_16425 PF08274 PhnA Zinc-Ribbon EN12_16460 PF00990 Diguanylate cyclase, GGDEF domain EN12_16460 PF17151 Periplasmic sensor domain EN12_16480 PF00990 Diguanylate cyclase, GGDEF domain EN12_16480 PF17158 Membrane-associated sensor, integral membrane domain EN12_16495 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EN12_16495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EN12_16495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EN12_16500 PF02233 NAD(P) transhydrogenase beta subunit EN12_16510 PF00486 Transcriptional regulatory protein, C terminal EN12_16510 PF00072 Response regulator receiver domain EN12_16535 PF01253 Translation initiation factor SUI1 EN12_16545 PF01820 D-ala D-ala ligase N-terminus EN12_16545 PF07478 D-ala D-ala ligase C-terminus EN12_16555 PF00583 Acetyltransferase (GNAT) family EN12_16555 PF13380 CoA binding domain EN12_16555 PF13607 Succinyl-CoA ligase like flavodoxin domain EN12_16560 PF03466 LysR substrate binding domain EN12_16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_16565 PF07715 TonB-dependent Receptor Plug Domain EN12_16565 PF00593 TonB dependent receptor EN12_16570 PF12793 Sugar transport-related sRNA regulator N-term EN12_16570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EN12_16580 PF03061 Thioesterase superfamily EN12_16600 PF02798 Glutathione S-transferase, N-terminal domain EN12_16600 PF00043 Glutathione S-transferase, C-terminal domain EN12_16615 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_16615 PF12804 MobA-like NTP transferase domain EN12_16615 PF03479 Plants and Prokaryotes Conserved (PCC) domain EN12_16620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_16620 PF00005 ABC transporter EN12_16625 PF00528 Binding-protein-dependent transport system inner membrane component EN12_16625 PF12911 N-terminal TM domain of oligopeptide transport permease C EN12_16630 PF00528 Binding-protein-dependent transport system inner membrane component EN12_16635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EN12_16660 PF00854 POT family EN12_16670 PF07702 UTRA domain EN12_16670 PF00392 Bacterial regulatory proteins, gntR family EN12_16675 PF00528 Binding-protein-dependent transport system inner membrane component EN12_16680 PF00005 ABC transporter EN12_16690 PF00266 Aminotransferase class-V EN12_16700 PF13419 Haloacid dehalogenase-like hydrolase EN12_16705 PF01272 Transcription elongation factor, GreA/GreB, C-term EN12_16705 PF14760 Rnk N-terminus EN12_16710 PF13419 Haloacid dehalogenase-like hydrolase EN12_16725 PF01741 Large-conductance mechanosensitive channel, MscL EN12_16730 PF01268 Formate--tetrahydrofolate ligase EN12_16735 PF01641 SelR domain EN12_16735 PF01625 Peptide methionine sulfoxide reductase EN12_16740 PF01227 GTP cyclohydrolase I EN12_16745 PF00994 Probable molybdopterin binding domain EN12_16745 PF03454 MoeA C-terminal region (domain IV) EN12_16745 PF03453 MoeA N-terminal region (domain I and II) EN12_16750 PF00899 ThiF family EN12_16760 PF00581 Rhodanese-like domain EN12_16765 PF04198 Putative sugar-binding domain EN12_16775 PF00923 Transaldolase/Fructose-6-phosphate aldolase EN12_16780 PF00456 Transketolase, thiamine diphosphate binding domain EN12_16780 PF02780 Transketolase, C-terminal domain EN12_16780 PF02779 Transketolase, pyrimidine binding domain EN12_16795 PF02810 SEC-C motif EN12_16795 PF07516 SecA Wing and Scaffold domain EN12_16795 PF01043 SecA preprotein cross-linking domain EN12_16795 PF07517 SecA DEAD-like domain EN12_16805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EN12_16805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EN12_16820 PF06942 GlpM protein EN12_16830 PF03466 LysR substrate binding domain EN12_16830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_16835 PF03992 Antibiotic biosynthesis monooxygenase EN12_16845 PF00873 AcrB/AcrD/AcrF family EN12_16860 PF04143 Sulphur transport EN12_16875 PF07992 Pyridine nucleotide-disulphide oxidoreductase EN12_16875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EN12_16920 PF02378 Phosphotransferase system, EIIC EN12_16920 PF00367 phosphotransferase system, EIIB EN12_16930 PF00251 Glycosyl hydrolases family 32 N-terminal domain EN12_16930 PF08244 Glycosyl hydrolases family 32 C terminal EN12_16935 PF00294 pfkB family carbohydrate kinase EN12_16940 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EN12_16940 PF01266 FAD dependent oxidoreductase EN12_16945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_16945 PF00672 HAMP domain EN12_16950 PF13488 Glycine zipper EN12_16950 PF00691 OmpA family EN12_16955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EN12_16955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EN12_16960 PF13419 Haloacid dehalogenase-like hydrolase EN12_16965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_16965 PF12729 Four helix bundle sensory module for signal transduction EN12_16965 PF00672 HAMP domain EN12_16970 PF03606 C4-dicarboxylate anaerobic carrier EN12_16975 PF03313 Serine dehydratase alpha chain EN12_16975 PF03315 Serine dehydratase beta chain EN12_16980 PF00474 Sodium:solute symporter family EN12_16995 PF00356 Bacterial regulatory proteins, lacI family EN12_17000 PF00072 Response regulator receiver domain EN12_17000 PF00196 Bacterial regulatory proteins, luxR family EN12_17005 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EN12_17005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_17005 PF07730 Histidine kinase EN12_17005 PF00672 HAMP domain EN12_17010 PF13187 4Fe-4S dicluster domain EN12_17010 PF12838 4Fe-4S dicluster domain EN12_17020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EN12_17020 PF00384 Molybdopterin oxidoreductase EN12_17020 PF01568 Molydopterin dinucleotide binding domain EN12_17025 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EN12_17030 PF03264 NapC/NirT cytochrome c family, N-terminal region EN12_17040 PF01966 HD domain EN12_17045 PF00072 Response regulator receiver domain EN12_17045 PF00196 Bacterial regulatory proteins, luxR family EN12_17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_17050 PF07730 Histidine kinase EN12_17050 PF05231 MASE1 EN12_17055 PF07690 Major Facilitator Superfamily EN12_17065 PF00528 Binding-protein-dependent transport system inner membrane component EN12_17070 PF00005 ABC transporter EN12_17070 PF08402 TOBE domain EN12_17075 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus EN12_17085 PF02803 Thiolase, C-terminal domain EN12_17085 PF00108 Thiolase, N-terminal domain EN12_17090 PF00106 short chain dehydrogenase EN12_17095 PF07549 SecD/SecF GG Motif EN12_17095 PF02355 Protein export membrane protein EN12_17100 PF13721 SecD export protein N-terminal TM region EN12_17100 PF02355 Protein export membrane protein EN12_17100 PF07549 SecD/SecF GG Motif EN12_17115 PF17158 Membrane-associated sensor, integral membrane domain EN12_17115 PF00990 Diguanylate cyclase, GGDEF domain EN12_17120 PF00483 Nucleotidyl transferase EN12_17125 PF06483 Chitinase C EN12_17125 PF00704 Glycosyl hydrolases family 18 EN12_17130 PF00465 Iron-containing alcohol dehydrogenase EN12_17140 PF02954 Bacterial regulatory protein, Fis family EN12_17140 PF00072 Response regulator receiver domain EN12_17140 PF14532 Sigma-54 interaction domain EN12_17145 PF02743 Cache domain EN12_17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_17145 PF00512 His Kinase A (phospho-acceptor) domain EN12_17155 PF07690 Major Facilitator Superfamily EN12_17160 PF00224 Pyruvate kinase, barrel domain EN12_17160 PF02887 Pyruvate kinase, alpha/beta domain EN12_17165 PF01627 Hpt domain EN12_17165 PF00512 His Kinase A (phospho-acceptor) domain EN12_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_17165 PF00072 Response regulator receiver domain EN12_17165 PF00672 HAMP domain EN12_17170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EN12_17175 PF02142 MGS-like domain EN12_17180 PF00857 Isochorismatase family EN12_17185 PF01219 Prokaryotic diacylglycerol kinase EN12_17200 PF12462 DNA helicase IV / RNA helicase N terminal EN12_17200 PF00580 UvrD/REP helicase N-terminal domain EN12_17200 PF13361 UvrD-like helicase C-terminal domain EN12_17205 PF12805 FUSC-like inner membrane protein yccS EN12_17210 PF00072 Response regulator receiver domain EN12_17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_17210 PF00512 His Kinase A (phospho-acceptor) domain EN12_17210 PF08448 PAS fold EN12_17210 PF13188 PAS domain EN12_17235 PF03459 TOBE domain EN12_17235 PF00005 ABC transporter EN12_17240 PF00528 Binding-protein-dependent transport system inner membrane component EN12_17250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EN12_17250 PF07685 CobB/CobQ-like glutamine amidotransferase domain EN12_17295 PF09308 LuxQ, periplasmic EN12_17295 PF00072 Response regulator receiver domain EN12_17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_17295 PF00512 His Kinase A (phospho-acceptor) domain EN12_17300 PF13407 Periplasmic binding protein domain EN12_17310 PF01541 GIY-YIG catalytic domain EN12_17315 PF04337 Protein of unknown function, DUF480 EN12_17325 PF04363 Protein of unknown function (DUF496) EN12_17340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EN12_17340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EN12_17350 PF04324 BFD-like [2Fe-2S] binding domain EN12_17350 PF01266 FAD dependent oxidoreductase EN12_17355 PF00890 FAD binding domain EN12_17360 PF02754 Cysteine-rich domain EN12_17360 PF13183 4Fe-4S dicluster domain EN12_17365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EN12_17365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EN12_17370 PF00085 Thioredoxin EN12_17375 PF07690 Major Facilitator Superfamily EN12_17400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_17400 PF03466 LysR substrate binding domain EN12_17405 PF00528 Binding-protein-dependent transport system inner membrane component EN12_17410 PF00528 Binding-protein-dependent transport system inner membrane component EN12_17415 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_17420 PF00005 ABC transporter EN12_17430 PF05762 VWA domain containing CoxE-like protein EN12_17435 PF17868 AAA lid domain EN12_17435 PF12592 Protein of unknown function (DUF3763) EN12_17435 PF07728 AAA domain (dynein-related subfamily) EN12_17440 PF00293 NUDIX domain EN12_17445 PF01212 Beta-eliminating lyase EN12_17450 PF00034 Cytochrome c EN12_17455 PF08361 MAATS-type transcriptional repressor, C-terminal region EN12_17455 PF00440 Bacterial regulatory proteins, tetR family EN12_17460 PF00271 Helicase conserved C-terminal domain EN12_17460 PF00270 DEAD/DEAH box helicase EN12_17465 PF04336 Acyl carrier protein phosphodiesterase EN12_17475 PF03222 Tryptophan/tyrosine permease family EN12_17480 PF00672 HAMP domain EN12_17480 PF12729 Four helix bundle sensory module for signal transduction EN12_17480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_17485 PF16363 GDP-mannose 4,6 dehydratase EN12_17490 PF03746 LamB/YcsF family EN12_17500 PF02626 Carboxyltransferase domain, subdomain A and B EN12_17510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EN12_17510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EN12_17520 PF00005 ABC transporter EN12_17525 PF13472 GDSL-like Lipase/Acylhydrolase family EN12_17530 PF12241 Trans-2-enoyl-CoA reductase catalytic region EN12_17530 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EN12_17530 PF07055 Enoyl reductase FAD binding domain EN12_17535 PF00498 FHA domain EN12_17535 PF00563 EAL domain EN12_17535 PF00990 Diguanylate cyclase, GGDEF domain EN12_17550 PF00684 DnaJ central domain EN12_17550 PF00226 DnaJ domain EN12_17550 PF01556 DnaJ C terminal domain EN12_17565 PF00665 Integrase core domain EN12_17570 PF01527 Transposase EN12_17585 PF02796 Helix-turn-helix domain of resolvase EN12_17585 PF00239 Resolvase, N terminal domain EN12_17595 PF13419 Haloacid dehalogenase-like hydrolase EN12_17610 PF00294 pfkB family carbohydrate kinase EN12_17615 PF00884 Sulfatase EN12_17625 PF00270 DEAD/DEAH box helicase EN12_17625 PF00271 Helicase conserved C-terminal domain EN12_17625 PF03880 DbpA RNA binding domain EN12_17630 PF08206 Ribonuclease B OB domain EN12_17630 PF00773 RNB domain EN12_17630 PF00575 S1 RNA binding domain EN12_17640 PF12849 PBP superfamily domain EN12_17645 PF01575 MaoC like domain EN12_17650 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EN12_17655 PF18416 N-acetylglucosamine binding protein domain 2 EN12_17655 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading EN12_17660 PF04151 Bacterial pre-peptidase C-terminal domain EN12_17660 PF01447 Thermolysin metallopeptidase, catalytic domain EN12_17660 PF03413 Peptidase propeptide and YPEB domain EN12_17660 PF07504 Fungalysin/Thermolysin Propeptide Motif EN12_17660 PF02868 Thermolysin metallopeptidase, alpha-helical domain EN12_17665 PF04389 Peptidase family M28 EN12_17665 PF04151 Bacterial pre-peptidase C-terminal domain EN12_17670 PF00491 Arginase family EN12_17675 PF17810 Arginine decarboxylase helical bundle domain EN12_17675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EN12_17675 PF17944 Arginine decarboxylase C-terminal helical extension EN12_17685 PF00571 CBS domain EN12_17685 PF01769 Divalent cation transporter EN12_17685 PF03448 MgtE intracellular N domain EN12_17690 PF00166 Chaperonin 10 Kd subunit EN12_17695 PF00118 TCP-1/cpn60 chaperonin family EN12_17705 PF13840 ACT domain EN12_17705 PF00696 Amino acid kinase family EN12_17710 PF06339 Ectoine synthase EN12_17715 PF00202 Aminotransferase class-III EN12_17720 PF00583 Acetyltransferase (GNAT) family EN12_17725 PF01329 Pterin 4 alpha carbinolamine dehydratase EN12_17730 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EN12_17735 PF00501 AMP-binding enzyme EN12_17735 PF13193 AMP-binding enzyme C-terminal domain EN12_17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_17755 PF03466 LysR substrate binding domain EN12_17765 PF00892 EamA-like transporter family EN12_17770 PF14602 Hexapeptide repeat of succinyl-transferase EN12_17770 PF00132 Bacterial transferase hexapeptide (six repeats) EN12_17770 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EN12_17775 PF00571 CBS domain EN12_17775 PF03471 Transporter associated domain EN12_17775 PF01595 Cyclin M transmembrane N-terminal domain EN12_17780 PF02566 OsmC-like protein EN12_17785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EN12_17790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EN12_17790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EN12_17805 PF13520 Amino acid permease EN12_17810 PF00990 Diguanylate cyclase, GGDEF domain EN12_17820 PF00072 Response regulator receiver domain EN12_17820 PF04397 LytTr DNA-binding domain EN12_17825 PF06580 Histidine kinase EN12_17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_17825 PF07694 5TMR of 5TMR-LYT EN12_17825 PF13492 GAF domain EN12_17840 PF00005 ABC transporter EN12_17840 PF12704 MacB-like periplasmic core domain EN12_17840 PF02687 FtsX-like permease family EN12_17845 PF00005 ABC transporter EN12_17860 PF00248 Aldo/keto reductase family EN12_17865 PF00128 Alpha amylase, catalytic domain EN12_17880 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EN12_17885 PF12262 Bacterial virulence factor lipase N-terminal EN12_17890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_17890 PF13426 PAS domain EN12_17890 PF08447 PAS fold EN12_17895 PF03413 Peptidase propeptide and YPEB domain EN12_17895 PF01447 Thermolysin metallopeptidase, catalytic domain EN12_17895 PF02868 Thermolysin metallopeptidase, alpha-helical domain EN12_17895 PF07504 Fungalysin/Thermolysin Propeptide Motif EN12_17895 PF04151 Bacterial pre-peptidase C-terminal domain EN12_17900 PF03922 OmpW family EN12_17910 PF00768 D-alanyl-D-alanine carboxypeptidase EN12_17915 PF00155 Aminotransferase class I and II EN12_17915 PF00392 Bacterial regulatory proteins, gntR family EN12_17920 PF01654 Cytochrome bd terminal oxidase subunit I EN12_17925 PF02322 Cytochrome bd terminal oxidase subunit II EN12_17935 PF00291 Pyridoxal-phosphate dependent enzyme EN12_17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_17940 PF03466 LysR substrate binding domain EN12_17980 PF08240 Alcohol dehydrogenase GroES-like domain EN12_17980 PF00107 Zinc-binding dehydrogenase EN12_17985 PF00155 Aminotransferase class I and II EN12_17990 PF01965 DJ-1/PfpI family EN12_18005 PF03466 LysR substrate binding domain EN12_18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_18010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EN12_18035 PF01966 HD domain EN12_18040 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EN12_18040 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EN12_18045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EN12_18050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EN12_18050 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EN12_18075 PF02595 Glycerate kinase family EN12_18080 PF02447 GntP family permease EN12_18085 PF13556 PucR C-terminal helix-turn-helix domain EN12_18085 PF17853 GGDEF-like domain EN12_18085 PF05651 Putative sugar diacid recognition EN12_18090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18090 PF00672 HAMP domain EN12_18095 PF01243 Pyridoxamine 5'-phosphate oxidase EN12_18100 PF06228 Haem utilisation ChuX/HutX EN12_18105 PF04055 Radical SAM superfamily EN12_18110 PF03544 Gram-negative bacterial TonB protein C-terminal EN12_18115 PF01618 MotA/TolQ/ExbB proton channel family EN12_18120 PF02472 Biopolymer transport protein ExbD/TolR EN12_18125 PF01497 Periplasmic binding protein EN12_18130 PF01032 FecCD transport family EN12_18135 PF00005 ABC transporter EN12_18165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18165 PF00672 HAMP domain EN12_18165 PF02743 Cache domain EN12_18170 PF00111 2Fe-2S iron-sulfur cluster binding domain EN12_18170 PF03473 MOSC domain EN12_18170 PF03476 MOSC N-terminal beta barrel domain EN12_18170 PF00111 2Fe-2S iron-sulfur cluster binding domain EN12_18170 PF03473 MOSC domain EN12_18170 PF03476 MOSC N-terminal beta barrel domain EN12_18175 PF01979 Amidohydrolase family EN12_18185 PF05656 Protein of unknown function (DUF805) EN12_18195 PF05958 tRNA (Uracil-5-)-methyltransferase EN12_18200 PF05661 Protein of unknown function (DUF808) EN12_18210 PF00313 'Cold-shock' DNA-binding domain EN12_18235 PF00990 Diguanylate cyclase, GGDEF domain EN12_18235 PF08448 PAS fold EN12_18240 PF08220 DeoR-like helix-turn-helix domain EN12_18240 PF00455 DeoR C terminal sensor domain EN12_18255 PF00528 Binding-protein-dependent transport system inner membrane component EN12_18260 PF00528 Binding-protein-dependent transport system inner membrane component EN12_18260 PF14785 Maltose transport system permease protein MalF P2 domain EN12_18265 PF01547 Bacterial extracellular solute-binding protein EN12_18270 PF00005 ABC transporter EN12_18270 PF08402 TOBE domain EN12_18275 PF13302 Acetyltransferase (GNAT) domain EN12_18290 PF01906 Putative heavy-metal-binding EN12_18295 PF00196 Bacterial regulatory proteins, luxR family EN12_18305 PF01584 CheW-like domain EN12_18305 PF00072 Response regulator receiver domain EN12_18310 PF01047 MarR family EN12_18315 PF00990 Diguanylate cyclase, GGDEF domain EN12_18330 PF00563 EAL domain EN12_18330 PF03707 Bacterial signalling protein N terminal repeat EN12_18330 PF00990 Diguanylate cyclase, GGDEF domain EN12_18350 PF03466 LysR substrate binding domain EN12_18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_18355 PF00563 EAL domain EN12_18355 PF00990 Diguanylate cyclase, GGDEF domain EN12_18365 PF02678 Pirin EN12_18365 PF05726 Pirin C-terminal cupin domain EN12_18370 PF06865 Pyrimidine/purine nucleoside phosphorylase EN12_18380 PF07690 Major Facilitator Superfamily EN12_18390 PF00672 HAMP domain EN12_18390 PF17200 Single Cache domain 2 EN12_18390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18395 PF05362 Lon protease (S16) C-terminal proteolytic domain EN12_18395 PF13654 AAA domain EN12_18405 PF00005 ABC transporter EN12_18405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_18410 PF01797 Transposase IS200 like EN12_18415 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_18420 PF13426 PAS domain EN12_18420 PF08447 PAS fold EN12_18420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_18435 PF03466 LysR substrate binding domain EN12_18440 PF02652 L-lactate permease EN12_18445 PF01070 FMN-dependent dehydrogenase EN12_18455 PF03618 Kinase/pyrophosphorylase EN12_18465 PF00391 PEP-utilising enzyme, mobile domain EN12_18465 PF02896 PEP-utilising enzyme, TIM barrel domain EN12_18465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EN12_18470 PF08447 PAS fold EN12_18470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18475 PF01554 MatE EN12_18480 PF00270 DEAD/DEAH box helicase EN12_18480 PF00271 Helicase conserved C-terminal domain EN12_18485 PF03466 LysR substrate binding domain EN12_18485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_18495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EN12_18505 PF00005 ABC transporter EN12_18505 PF00664 ABC transporter transmembrane region EN12_18515 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EN12_18525 PF01810 LysE type translocator EN12_18530 PF12833 Helix-turn-helix domain EN12_18545 PF01557 Fumarylacetoacetate (FAA) hydrolase family EN12_18550 PF01047 MarR family EN12_18555 PF02566 OsmC-like protein EN12_18565 PF13609 Gram-negative porin EN12_18570 PF00892 EamA-like transporter family EN12_18575 PF00462 Glutaredoxin EN12_18580 PF07670 Nucleoside recognition EN12_18585 PF07670 Nucleoside recognition EN12_18590 PF03600 Citrate transporter EN12_18600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EN12_18600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EN12_18605 PF06029 AlkA N-terminal domain EN12_18605 PF00730 HhH-GPD superfamily base excision DNA repair protein EN12_18610 PF07681 DoxX EN12_18615 PF03466 LysR substrate binding domain EN12_18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_18635 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EN12_18645 PF07148 Maltose operon periplasmic protein precursor (MalM) EN12_18650 PF02264 LamB porin EN12_18655 PF00128 Alpha amylase, catalytic domain EN12_18655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EN12_18665 PF12729 Four helix bundle sensory module for signal transduction EN12_18665 PF00672 HAMP domain EN12_18665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18680 PF00672 HAMP domain EN12_18680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18690 PF00793 DAHP synthetase I family EN12_18695 PF00005 ABC transporter EN12_18700 PF00528 Binding-protein-dependent transport system inner membrane component EN12_18705 PF00497 Bacterial extracellular solute-binding proteins, family 3 EN12_18710 PF00528 Binding-protein-dependent transport system inner membrane component EN12_18715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EN12_18715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EN12_18715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EN12_18715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EN12_18725 PF04225 Opacity-associated protein A LysM-like domain EN12_18725 PF01551 Peptidase family M23 EN12_18735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EN12_18735 PF02378 Phosphotransferase system, EIIC EN12_18735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EN12_18740 PF08125 Mannitol dehydrogenase C-terminal domain EN12_18740 PF01232 Mannitol dehydrogenase Rossmann domain EN12_18745 PF05068 Mannitol repressor EN12_18750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EN12_18780 PF13460 NAD(P)H-binding EN12_18785 PF03466 LysR substrate binding domain EN12_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_18790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18790 PF00672 HAMP domain EN12_18790 PF02743 Cache domain EN12_18795 PF00106 short chain dehydrogenase EN12_18800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EN12_18800 PF03466 LysR substrate binding domain EN12_18805 PF04013 Putative SAM-dependent RNA methyltransferase EN12_18810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EN12_18820 PF13520 Amino acid permease EN12_18825 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EN12_18825 PF01276 Orn/Lys/Arg decarboxylase, major domain EN12_18825 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EN12_18830 PF00171 Aldehyde dehydrogenase family EN12_18835 PF01037 Lrp/AsnC ligand binding domain EN12_18840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18840 PF00672 HAMP domain EN12_18840 PF02743 Cache domain EN12_18850 PF00474 Sodium:solute symporter family EN12_18860 PF00171 Aldehyde dehydrogenase family EN12_18860 PF01619 Proline dehydrogenase EN12_18860 PF14850 DNA-binding domain of Proline dehydrogenase EN12_18860 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EN12_18865 PF12833 Helix-turn-helix domain EN12_18875 PF03781 Sulfatase-modifying factor enzyme 1 EN12_18880 PF00072 Response regulator receiver domain EN12_18880 PF00196 Bacterial regulatory proteins, luxR family EN12_18885 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EN12_18885 PF01243 Pyridoxamine 5'-phosphate oxidase EN12_18890 PF00529 HlyD membrane-fusion protein of T1SS EN12_18905 PF00664 ABC transporter transmembrane region EN12_18905 PF00005 ABC transporter EN12_18905 PF03412 Peptidase C39 family EN12_18915 PF00486 Transcriptional regulatory protein, C terminal EN12_18915 PF00072 Response regulator receiver domain EN12_18925 PF02743 Cache domain EN12_18925 PF00672 HAMP domain EN12_18925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18930 PF00072 Response regulator receiver domain EN12_18930 PF01339 CheB methylesterase EN12_18935 PF03975 CheD chemotactic sensory transduction EN12_18940 PF03705 CheR methyltransferase, all-alpha domain EN12_18940 PF01739 CheR methyltransferase, SAM binding domain EN12_18945 PF02203 Tar ligand binding domain homologue EN12_18945 PF00672 HAMP domain EN12_18945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_18950 PF01584 CheW-like domain EN12_18955 PF01584 CheW-like domain EN12_18960 PF01627 Hpt domain EN12_18960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_18960 PF01584 CheW-like domain EN12_18960 PF02895 Signal transducing histidine kinase, homodimeric domain EN12_18960 PF09078 CheY binding EN12_18965 PF00072 Response regulator receiver domain EN12_18985 PF00528 Binding-protein-dependent transport system inner membrane component EN12_18990 PF12911 N-terminal TM domain of oligopeptide transport permease C EN12_18990 PF00528 Binding-protein-dependent transport system inner membrane component EN12_18995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EN12_18995 PF00005 ABC transporter EN12_19000 PF08019 Phosphoethanolamine transferase EptA/EptB EN12_19000 PF00884 Sulfatase EN12_19005 PF00512 His Kinase A (phospho-acceptor) domain EN12_19005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EN12_19005 PF08521 Two-component sensor kinase N-terminal EN12_19010 PF00486 Transcriptional regulatory protein, C terminal EN12_19010 PF00072 Response regulator receiver domain EN12_19030 PF00501 AMP-binding enzyme EN12_19040 PF05127 Helicase EN12_19040 PF13718 GNAT acetyltransferase 2 EN12_19045 PF13416 Bacterial extracellular solute-binding protein EN12_19050 PF08775 ParB family EN12_19050 PF02195 ParB-like nuclease domain EN12_19055 PF18607 ParA helix turn helix domain EN12_19055 PF13614 AAA domain EN12_19060 PF00154 recA bacterial DNA recombination protein EN12_19125 PF00437 Type II/IV secretion system protein EN12_19140 PF07655 Secretin N-terminal domain EN12_19140 PF00263 Bacterial type II and III secretion system protein EN12_19155 PF00437 Type II/IV secretion system protein EN12_19170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EN12_19170 PF00437 Type II/IV secretion system protein EN12_19180 PF04055 Radical SAM superfamily EN12_19180 PF13186 Iron-sulfur cluster-binding domain EN12_19230 PF08411 Exonuclease C-terminal EN12_19230 PF00929 Exonuclease EN12_19275 PF01131 DNA topoisomerase EN12_19275 PF01751 Toprim domain EN12_19275 PF01396 Topoisomerase DNA binding C4 zinc finger EN12_19290 PF07724 AAA domain (Cdc48 subfamily) EN12_19290 PF06689 ClpX C4-type zinc finger EN12_19290 PF10431 C-terminal, D2-small domain, of ClpB protein EN12_19295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EN12_19295 PF00476 DNA polymerase family A EN12_19295 PF01367 5'-3' exonuclease, C-terminal SAM fold EN12_19335 PF02463 RecF/RecN/SMC N terminal domain EN12_19345 PF00580 UvrD/REP helicase N-terminal domain EN12_19345 PF13361 UvrD-like helicase C-terminal domain EN12_19355 PF01131 DNA topoisomerase EN12_19355 PF01751 Toprim domain EN12_19360 PF00563 EAL domain EN12_19360 PF05231 MASE1 EN12_19380 PF00270 DEAD/DEAH box helicase EN12_19380 PF00271 Helicase conserved C-terminal domain EN12_19380 PF17191 RecG wedge domain EN12_19385 PF01521 Iron-sulphur cluster biosynthesis EN12_19400 PF07733 Bacterial DNA polymerase III alpha NTPase domain EN12_19400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EN12_19400 PF01336 OB-fold nucleic acid binding domain EN12_19400 PF02811 PHP domain EN12_19400 PF14579 Helix-hairpin-helix motif EN12_19405 PF00772 DnaB-like helicase N terminal domain EN12_19405 PF03796 DnaB-like helicase C terminal domain EN12_19410 PF00929 Exonuclease EN12_19420 PF02163 Peptidase family M50 EN12_19420 PF17820 PDZ domain EN12_19440 PF17768 RecJ OB domain EN12_19440 PF02272 DHHA1 domain EN12_19440 PF01368 DHH family EN12_19450 PF13538 UvrD-like helicase C-terminal domain EN12_19460 PF16124 RecQ zinc-binding EN12_19460 PF09382 RQC domain EN12_19460 PF00270 DEAD/DEAH box helicase EN12_19460 PF00271 Helicase conserved C-terminal domain EN12_19460 PF00570 HRDC domain EN12_19465 PF02223 Thymidylate kinase EN12_19495 PF00437 Type II/IV secretion system protein EN12_19555 PF04381 Putative exonuclease, RdgC EN12_19590 PF02463 RecF/RecN/SMC N terminal domain EN12_19600 PF12323 Helix-turn-helix domain EN12_19620 PF01966 HD domain EN12_19630 PF02810 SEC-C motif EN12_19630 PF07517 SecA DEAD-like domain EN12_19630 PF01043 SecA preprotein cross-linking domain EN12_19630 PF07516 SecA Wing and Scaffold domain EN12_19640 PF00211 Adenylate and Guanylate cyclase catalytic domain EN12_19675 PF06750 Bacterial Peptidase A24 N-terminal domain EN12_19675 PF01478 Type IV leader peptidase family EN12_19695 PF02559 CarD-like/TRCF domain EN12_19695 PF00270 DEAD/DEAH box helicase EN12_19695 PF17757 UvrB interaction domain EN12_19695 PF00271 Helicase conserved C-terminal domain EN12_19695 PF03461 TRCF domain EN12_19780 PF04362 Bacterial Fe(2+) trafficking EN12_19810 PF05970 PIF1-like helicase EN12_19880 PF00266 Aminotransferase class-V EN12_19895 PF13361 UvrD-like helicase C-terminal domain EN12_19895 PF00580 UvrD/REP helicase N-terminal domain EN12_19910 PF07282 Putative transposase DNA-binding domain EN12_19910 PF01385 Probable transposase EN12_19910 PF12323 Helix-turn-helix domain EN12_20010 PF00665 Integrase core domain EN12_20015 PF01695 IstB-like ATP binding protein EN12_20065 PF12323 Helix-turn-helix domain EN12_20065 PF01385 Probable transposase EN12_20065 PF07282 Putative transposase DNA-binding domain EN12_20200 PF00990 Diguanylate cyclase, GGDEF domain EN12_20200 PF17158 Membrane-associated sensor, integral membrane domain EN12_20215 PF00563 EAL domain EN12_20215 PF08668 HDOD domain EN12_20240 PF18073 Rubredoxin metal binding domain EN12_20250 PF02342 TerD domain EN12_20255 PF02342 TerD domain EN12_20270 PF11202 Phosphoribosyl transferase (PRTase) EN12_20270 PF15608 PELOTA RNA binding domain EN12_20285 PF02342 TerD domain EN12_20305 PF00268 Ribonucleotide reductase, small chain EN12_20310 PF00317 Ribonucleotide reductase, all-alpha domain EN12_20310 PF03477 ATP cone domain EN12_20310 PF02867 Ribonucleotide reductase, barrel domain EN12_20340 PF01292 Prokaryotic cytochrome b561 EN12_20345 PF04264 YceI-like domain EN12_20380 PF02086 D12 class N6 adenine-specific DNA methyltransferase EN12_20415 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EN12_20420 PF01467 Cytidylyltransferase-like EN12_20425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EN12_20425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EN12_20445 PF12792 CSS motif domain associated with EAL EN12_20445 PF00563 EAL domain EN12_20470 PF00265 Thymidine kinase EN12_20485 PF01521 Iron-sulphur cluster biosynthesis EN12_20490 PF01592 NifU-like N terminal domain EN12_20500 PF03120 NAD-dependent DNA ligase OB-fold domain EN12_20500 PF01653 NAD-dependent DNA ligase adenylation domain EN12_20500 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EN12_20500 PF00533 BRCA1 C Terminus (BRCT) domain EN12_20500 PF12826 Helix-hairpin-helix motif EN12_20515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EN12_20525 PF00816 H-NS histone family EN12_20565 PF00216 Bacterial DNA-binding protein EN12_20595 PF00691 OmpA family EN12_20610 PF01668 SmpB protein EN12_20870 PF00186 Dihydrofolate reductase EN12_20885 PF02601 Exonuclease VII, large subunit EN12_20885 PF13742 OB-fold nucleic acid binding domain EN12_20890 PF10138 vWA found in TerF C terminus EN12_20955 PF03167 Uracil DNA glycosylase superfamily EN12_20965 PF00216 Bacterial DNA-binding protein EN12_21000 PF02146 Sir2 family EN12_21065 PF00303 Thymidylate synthase EN12_21105 PF01612 3'-5' exonuclease EN12_21105 PF01367 5'-3' exonuclease, C-terminal SAM fold EN12_21105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EN12_21105 PF00476 DNA polymerase family A EN12_21235 PF01348 Type II intron maturase EN12_21235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EN12_21240 PF12323 Helix-turn-helix domain EN12_21240 PF01385 Probable transposase EN12_21240 PF07282 Putative transposase DNA-binding domain EN12_21265 PF00334 Nucleoside diphosphate kinase EN12_21310 PF01726 LexA DNA binding domain EN12_21310 PF00717 Peptidase S24-like EN12_21315 PF11799 impB/mucB/samB family C-terminal domain EN12_21315 PF13438 Domain of unknown function (DUF4113) EN12_21315 PF00817 impB/mucB/samB family EN12_21315 PF11798 IMS family HHH motif EN12_21325 PF08019 Phosphoethanolamine transferase EptA/EptB EN12_21325 PF00884 Sulfatase EN12_21330 PF01219 Prokaryotic diacylglycerol kinase EN12_21405 PF11202 Phosphoribosyl transferase (PRTase) EN12_21405 PF15608 PELOTA RNA binding domain EN12_21415 PF00464 Serine hydroxymethyltransferase EN12_21440 PF01027 Inhibitor of apoptosis-promoting Bax1 EN12_21450 PF02631 RecX family EN12_21490 PF00994 Probable molybdopterin binding domain EN12_21490 PF02464 Competence-damaged protein EN12_21490 PF18146 Damage-inducible protein CinA KH domain EN12_21540 PF01693 Caulimovirus viroplasmin EN12_21560 PF13411 MerR HTH family regulatory protein EN12_21560 PF00145 C-5 cytosine-specific DNA methylase EN12_21565 PF11734 TilS substrate C-terminal domain EN12_21565 PF09179 TilS substrate binding domain EN12_21565 PF01171 PP-loop family EN12_21630 PF06965 Na+/H+ antiporter 1 EN12_21635 PF00149 Calcineurin-like phosphoesterase EN12_21735 PF00436 Single-strand binding protein family EN12_21740 PF02600 Disulfide bond formation protein DsbB EN12_21830 PF01594 AI-2E family transporter EN12_21850 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family EN12_21895 PF01926 50S ribosome-binding GTPase EN12_21895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EN12_22040 PF01527 Transposase EN12_22045 PF00665 Integrase core domain EN12_22095 PF01743 Poly A polymerase head domain EN12_22095 PF12627 Probable RNA and SrmB- binding site of polymerase A EN12_22095 PF01966 HD domain EN12_22115 PF01228 Glycine radical EN12_22135 PF00665 Integrase core domain EN12_22140 PF01695 IstB-like ATP binding protein EN12_22150 PF13614 AAA domain EN12_22155 PF00462 Glutaredoxin EN12_22160 PF00216 Bacterial DNA-binding protein EN12_22195 PF07282 Putative transposase DNA-binding domain EN12_22195 PF01385 Probable transposase EN12_22195 PF12323 Helix-turn-helix domain EN12_22220 PF01595 Cyclin M transmembrane N-terminal domain EN12_22220 PF00571 CBS domain EN12_22240 PF03747 ADP-ribosylglycohydrolase EN12_22265 PF03741 Integral membrane protein TerC family EN12_22310 PF02146 Sir2 family EN12_22330 PF02195 ParB-like nuclease domain EN12_22330 PF18090 Centromere-binding protein HTH domain EN12_22480 PF00625 Guanylate kinase EN12_22555 PF01569 PAP2 superfamily EN12_22720 PF13597 Anaerobic ribonucleoside-triphosphate reductase EN12_22720 PF03477 ATP cone domain EN12_22995 PF00005 ABC transporter EN12_23130 PF12323 Helix-turn-helix domain EN12_23165 PF05360 yiaA/B two helix domain EN12_23210 PF12323 Helix-turn-helix domain EN12_23325 PF00113 Enolase, C-terminal TIM barrel domain EN12_23325 PF03952 Enolase, N-terminal domain EN12_23365 PF09615 CRISPR-associated protein (Cas_Csy3) EN12_23420 PF01385 Probable transposase EN12_23420 PF12323 Helix-turn-helix domain EN12_23420 PF07282 Putative transposase DNA-binding domain EN12_23500 PF00436 Single-strand binding protein family EN12_23540 PF00816 H-NS histone family EN12_23595 PF01420 Type I restriction modification DNA specificity domain EN12_23600 PF02384 N-6 DNA Methylase EN12_23600 PF12161 HsdM N-terminal domain EN12_23700 PF00293 NUDIX domain EN12_23745 PF07282 Putative transposase DNA-binding domain EN12_23745 PF12323 Helix-turn-helix domain EN12_23745 PF01385 Probable transposase EN12_23750 PF01348 Type II intron maturase EN12_23750 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EN12_23755 PF01385 Probable transposase EN12_23755 PF07282 Putative transposase DNA-binding domain EN12_23755 PF12323 Helix-turn-helix domain EN12_23825 PF01381 Helix-turn-helix EN12_23845 PF13307 Helicase C-terminal domain EN12_23845 PF06733 DEAD_2 EN12_23885 PF00550 Phosphopantetheine attachment site EN12_23905 PF03143 Elongation factor Tu C-terminal domain EN12_23905 PF03144 Elongation factor Tu domain 2 EN12_23905 PF00009 Elongation factor Tu GTP binding domain EN12_23950 PF00672 HAMP domain EN12_23950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EN12_23955 PF02631 RecX family EN12_24030 PF01385 Probable transposase EN12_24030 PF07282 Putative transposase DNA-binding domain EN12_24030 PF12323 Helix-turn-helix domain EN12_24085 PF00437 Type II/IV secretion system protein EN12_24165 PF01661 Macro domain EN12_24415 PF08534 Redoxin EN12_24415 PF00462 Glutaredoxin