locus-tag	class	description
BA953_00010	COG0840	transmembrane signaling receptor activity
BA953_00015	COG1328	CTP reductase activity
BA953_00020	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA953_00065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BA953_00070	COG0745	RESPONSE REGULATOR receiver
BA953_00075	COG2205	protein histidine kinase activity
BA953_00090	COG0811	peptide transport
BA953_00095	COG0811	peptide transport
BA953_00100	COG0848	biopolymer transport protein
BA953_00120	COG3290	protein histidine kinase activity
BA953_00125	COG4565	transcriptional regulatory protein
BA953_00150	COG0840	transmembrane signaling receptor activity
BA953_00155	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA953_00160	COG2146	nitrite reductase [NAD(P)H] activity
BA953_00165	COG2116	formate transmembrane transporter activity
BA953_00185	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BA953_00205	COG0583	DNA-binding transcription factor activity
BA953_00215	COG0745	RESPONSE REGULATOR receiver
BA953_00225	COG3713	MltA-interacting MipA family protein
BA953_00230	COG2990	Protein conserved in bacteria
BA953_00235	COG2186	Transcriptional regulator
BA953_00245	COG1288	antiporter activity
BA953_00255	COG2814	Major facilitator Superfamily
BA953_00265	COG3835	regulator
BA953_00270	COG1929	Belongs to the glycerate kinase type-1 family
BA953_00275	COG2977	Belongs to the P-Pant transferase superfamily
BA953_00280	COG1120	ATPase activity
BA953_00285	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BA953_00295	COG4615	Cyclic peptide transporter
BA953_00315	COG4774	siderophore transport
BA953_00350	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA953_00360	COG0297	glycogen (starch) synthase activity
BA953_00390	COG0438	transferase activity, transferring glycosyl groups
BA953_00395	COG0438	transferase activity, transferring glycosyl groups
BA953_00405	COG2204	response regulator
BA953_00455	COG0307	riboflavin synthase, alpha
BA953_00475	COG0791	NLP P60 protein
BA953_00480	COG0840	transmembrane signaling receptor activity
BA953_00495	COG1940	carbohydrate kinase activity
BA953_00510	COG0303	'Molybdopterin
BA953_00515	COG0746	molybdenum cofactor guanylyltransferase activity
BA953_00520	COG3842	ATPase activity
BA953_00525	COG4662	Binding-protein-dependent transport system inner membrane component
BA953_00540	COG3852	Histidine kinase
BA953_00555	COG1595	DNA-templated transcription, initiation
BA953_00565	COG0488	(ABC) transporter
BA953_00580	COG1028	Short-chain dehydrogenase reductase Sdr
BA953_00590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_00595	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA953_00600	COG3710	Transcriptional regulator
BA953_00605	COG0069	glutamate synthase activity
BA953_00625	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BA953_00630	COG0583	DNA-binding transcription factor activity
BA953_00660	COG3038	cytochrome b561
BA953_00670	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BA953_00700	COG3383	formate dehydrogenase (NAD+) activity
BA953_00700	COG0243	molybdopterin cofactor binding
BA953_00705	COG0437	4 iron, 4 sulfur cluster binding
BA953_00720	COG0004	ammonium transporteR
BA953_00725	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BA953_00730	COG2199	diguanylate cyclase activity
BA953_00735	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA953_00740	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA953_00745	COG1177	transmembrane transport
BA953_00750	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA953_00755	COG3842	ATPase activity
BA953_00815	COG3501	Rhs element vgr protein
BA953_00875	COG0589	response to stress
BA953_00880	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA953_00895	COG2217	Heavy metal translocating P-type atpase
BA953_00905	COG2010	Cytochrome c
BA953_00920	COG3278	Belongs to the heme-copper respiratory oxidase family
BA953_01015	COG0411	ABC transporter
BA953_01025	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BA953_01025	COG0596	Alpha beta hydrolase
BA953_01025	COG2226	methyltransferase
BA953_01070	COG1132	(ABC) transporter
BA953_01095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BA953_01100	COG2801	Transposase and inactivated derivatives
BA953_01105	COG0583	DNA-binding transcription factor activity
BA953_01120	COG1942	4-Oxalocrotonate Tautomerase
BA953_01135	COG3135	benzoate transporter
BA953_01140	COG1396	sequence-specific DNA binding
BA953_01150	COG1858	cytochrome C peroxidase
BA953_01275	COG0840	transmembrane signaling receptor activity
BA953_01435	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BA953_01455	COG0789	Transcriptional regulator
BA953_01515	COG1067	ATP-dependent peptidase activity
BA953_01520	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BA953_01535	COG0488	(ABC) transporter
BA953_01555	COG0167	dihydroorotate dehydrogenase activity
BA953_01570	COG0308	aminopeptidase N
BA953_01585	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
BA953_01590	COG1956	GAF domain-containing protein
BA953_01595	COG1132	(ABC) transporter
BA953_01600	COG2995	paraquat-inducible protein a
BA953_01635	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA953_01640	COG1666	GTP binding
BA953_01650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA953_01655	COG4597	amino acid ABC transporter
BA953_01660	COG0765	amino acid transport
BA953_01665	COG1126	abc transporter atp-binding protein
BA953_01670	COG0670	Belongs to the BI1 family
BA953_01675	COG2920	part of a sulfur-relay system
BA953_01680	COG1254	Belongs to the acylphosphatase family
BA953_01690	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BA953_01720	COG0602	queuosine metabolic process
BA953_01725	COG0561	phosphatase activity
BA953_01745	COG2828	Protein conserved in bacteria
BA953_01755	COG0372	Belongs to the citrate synthase family
BA953_01760	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BA953_01775	COG3501	Rhs element vgr protein
BA953_01875	COG0515	serine threonine protein kinase
BA953_01905	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_01920	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BA953_01940	COG0596	Alpha beta hydrolase
BA953_01940	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA953_01945	COG3063	Type IV pilus biogenesis stability protein PilW
BA953_01960	COG1451	nucleotide metabolic process
BA953_01970	COG0784	Response regulator, receiver
BA953_01970	COG5002	protein histidine kinase activity
BA953_01980	COG1119	ATPase activity
BA953_01990	COG2814	Major facilitator Superfamily
BA953_02000	COG2203	Gaf domain
BA953_02000	COG2199	diguanylate cyclase activity
BA953_02020	COG4139	cobalamin transport
BA953_02035	COG0406	alpha-ribazole phosphatase activity
BA953_02045	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BA953_02055	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BA953_02060	COG0702	epimerase
BA953_02070	COG2925	Exonuclease
BA953_02080	COG1346	cytolysis
BA953_02100	COG0500	methyltransferase
BA953_02120	COG4326	sporulation control protein
BA953_02125	COG2188	Transcriptional regulator
BA953_02130	COG1228	amidohydrolase
BA953_02135	COG0010	Belongs to the arginase family
BA953_02145	COG2986	histidine ammonia-lyase
BA953_02160	COG0277	FAD linked oxidase domain protein
BA953_02160	COG0247	lactate metabolic process
BA953_02175	COG2885	chlorophyll binding
BA953_02190	COG0625	glutathione transferase activity
BA953_02200	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BA953_02210	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA953_02230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA953_02250	COG0456	acetyltransferase
BA953_02275	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA953_02280	COG0454	-acetyltransferase
BA953_02335	COG3122	Protein conserved in bacteria
BA953_02375	COG2824	Alkylphosphonate utilization operon protein PhnA
BA953_02400	COG0730	response to heat
BA953_02410	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BA953_02420	COG0456	acetyltransferase
BA953_02435	COG4628	conserved protein (DUF2132)
BA953_02460	COG0546	phosphoglycolate phosphatase activity
BA953_02470	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA953_02515	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BA953_02525	COG2963	transposase activity
BA953_02530	COG2801	Transposase and inactivated derivatives
BA953_02535	COG2801	Transposase and inactivated derivatives
BA953_02545	COG2026	Addiction module toxin, RelE StbE family
BA953_02630	COG2962	Rard protein
BA953_02635	COG0531	amino acid
BA953_02645	COG0783	Belongs to the Dps family
BA953_02650	COG4667	esterase of the alpha-beta hydrolase superfamily
BA953_02685	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA953_02700	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BA953_02705	COG3108	Peptidase M15
BA953_02710	COG2989	Protein conserved in bacteria
BA953_02735	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BA953_02760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA953_02765	COG3283	Transcriptional regulator of aromatic amino acids metabolism
BA953_02775	COG3106	COG3106 Predicted ATPase
BA953_02795	COG2205	protein histidine kinase activity
BA953_02795	COG0784	Response regulator, receiver
BA953_02805	COG0494	nUDIX hydrolase
BA953_02810	COG0814	amino acid
BA953_02815	COG1760	l-serine dehydratase
BA953_02825	COG0814	amino acid
BA953_02835	COG0840	transmembrane signaling receptor activity
BA953_02840	COG0017	Asparaginyl-tRNA synthetase
BA953_02850	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA953_02860	COG2770	Histidine kinase
BA953_02860	COG3437	response regulator, receiver
BA953_02865	COG1448	Aminotransferase
BA953_02880	COG1643	Atp-dependent helicase
BA953_02885	COG0281	malic enzyme
BA953_02895	COG2949	membrane
BA953_02905	COG0612	Peptidase, M16
BA953_02920	COG2175	clavaminate synthase activity
BA953_02935	COG0492	ferredoxin-NADP+ reductase activity
BA953_02940	COG4988	ABC transporter
BA953_02945	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BA953_02950	COG2814	Major facilitator Superfamily
BA953_02960	COG0384	phenazine biosynthesis protein PhzF
BA953_02965	COG1187	pseudouridine synthase activity
BA953_02980	COG0009	L-threonylcarbamoyladenylate synthase
BA953_02985	COG0613	PHP domain protein
BA953_02995	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BA953_03000	COG0512	Glutamine amidotransferase of anthranilate synthase
BA953_03005	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BA953_03010	COG0135	phosphoribosylanthranilate isomerase activity
BA953_03010	COG0134	indole-3-glycerol-phosphate synthase activity
BA953_03015	COG0133	tryptophan synthase activity
BA953_03020	COG0159	tryptophan synthase activity
BA953_03025	COG1301	dicarboxylic acid transport
BA953_03090	COG0443	Heat shock 70 kDa protein
BA953_03100	COG1858	cytochrome C peroxidase
BA953_03150	COG2801	Transposase and inactivated derivatives
BA953_03160	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BA953_03165	COG0840	transmembrane signaling receptor activity
BA953_03185	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA953_03195	COG2207	Transcriptional regulator
BA953_03200	COG0583	DNA-binding transcription factor activity
BA953_03215	COG0673	inositol 2-dehydrogenase activity
BA953_03225	COG0583	DNA-binding transcription factor activity
BA953_03240	COG1846	Transcriptional regulator
BA953_03245	COG1764	response to oxidative stress
BA953_03250	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BA953_03255	COG0583	DNA-binding transcription factor activity
BA953_03280	COG1032	radical SAM domain protein
BA953_03290	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BA953_03300	COG4191	Histidine kinase
BA953_03300	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA953_03315	COG3070	regulator of competence-specific genes
BA953_03325	COG2431	L-lysine efflux transmembrane transporter activity
BA953_03335	COG0076	glutamate decarboxylase activity
BA953_03340	COG1737	Transcriptional regulator
BA953_03350	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA953_03360	COG4160	amino acid transport
BA953_03365	COG4215	(ABC) transporter
BA953_03385	COG1882	Formate acetyltransferase
BA953_03400	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BA953_03415	COG3713	MltA-interacting MipA family protein
BA953_03420	COG2766	serine protein kinase
BA953_03425	COG2718	Belongs to the UPF0229 family
BA953_03430	COG2719	SpoVR family
BA953_03435	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BA953_03450	COG1132	(ABC) transporter
BA953_03455	COG0658	competence protein
BA953_03455	COG2333	competence protein COMEC
BA953_03465	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA953_03470	COG1136	(ABC) transporter
BA953_03475	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA953_03485	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BA953_03505	COG1252	NADH dehydrogenase
BA953_03535	COG0537	adenosine 5'-monophosphoramidase activity
BA953_03550	COG2186	Transcriptional regulator
BA953_03565	COG1674	ftsk spoiiie
BA953_03575	COG0686	Belongs to the AlaDH PNT family
BA953_03580	COG3092	negative regulation of chromosome organization
BA953_03585	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA953_03590	COG0280	phosphate acetyltransferase
BA953_03590	COG0857	belongs to the CobB CobQ family
BA953_03595	COG3706	GGDEF domain
BA953_03600	COG0435	Glutathione S-transferase
BA953_03610	COG0444	Belongs to the ABC transporter superfamily
BA953_03615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA953_03620	COG0601	transmembrane transport
BA953_03635	COG2067	long-chain fatty acid transport protein
BA953_03640	COG3706	GGDEF domain
BA953_03665	COG1404	Belongs to the peptidase S8 family
BA953_03670	COG0840	transmembrane signaling receptor activity
BA953_03680	COG0330	HflC and HflK could
BA953_03700	COG1136	(ABC) transporter
BA953_03700	COG0577	efflux transmembrane transporter activity
BA953_03710	COG0577	efflux transmembrane transporter activity
BA953_03720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_03730	COG3227	Zinc metalloprotease (Elastase)
BA953_03740	COG1770	oligopeptidase
BA953_03745	COG3397	chitin binding
BA953_03765	COG3876	Protein conserved in bacteria
BA953_03770	COG1472	Belongs to the glycosyl hydrolase 3 family
BA953_03790	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA953_03795	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA953_03800	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA953_03815	COG2855	membrane
BA953_03835	COG0730	response to heat
BA953_03840	COG0280	phosphate acetyltransferase
BA953_03845	COG1414	Transcriptional regulator
BA953_03890	COG3706	GGDEF domain
BA953_03905	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BA953_03910	COG1946	Acyl-CoA thioesterase
BA953_03925	COG1522	sequence-specific DNA binding
BA953_03950	COG0477	Major facilitator Superfamily
BA953_03955	COG2855	membrane
BA953_03965	COG1441	menaquinone biosynthetic process
BA953_03975	COG0596	Alpha beta hydrolase
BA953_03980	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BA953_03985	COG1169	isochorismate synthase
BA953_03990	COG0436	Aminotransferase
BA953_03995	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BA953_04005	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BA953_04010	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BA953_04025	COG0513	Belongs to the DEAD box helicase family
BA953_04030	COG0616	signal peptide processing
BA953_04035	COG1028	Short-chain dehydrogenase reductase Sdr
BA953_04050	COG0587	DNA-directed DNA polymerase activity
BA953_04055	COG0784	Response regulator, receiver
BA953_04055	COG0835	chemotaxis
BA953_04060	COG1940	carbohydrate kinase activity
BA953_04065	COG0469	pyruvate kinase activity
BA953_04070	COG4667	esterase of the alpha-beta hydrolase superfamily
BA953_04080	COG0733	neurotransmitter:sodium symporter activity
BA953_04090	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA953_04090	COG1263	PTS System
BA953_04095	COG0084	hydrolase, TatD family'
BA953_04100	COG0470	DNA polymerase III
BA953_04105	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BA953_04110	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BA953_04115	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BA953_04140	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BA953_04155	COG1399	metal-binding, possibly nucleic acid-binding protein
BA953_04160	COG0424	maF-like protein
BA953_04165	COG0564	pseudouridine synthase activity
BA953_04170	COG1530	ribonuclease E activity
BA953_04175	COG0659	secondary active sulfate transmembrane transporter activity
BA953_04180	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BA953_04185	COG0318	PFAM AMP-dependent synthetase and ligase
BA953_04190	COG2267	carboxylic ester hydrolase activity
BA953_04205	COG1214	PFAM Peptidase M22, glycoprotease
BA953_04210	COG1199	ATP-dependent helicase activity
BA953_04220	COG0788	formyltetrahydrofolate deformylase activity
BA953_04225	COG1902	pentaerythritol trinitrate reductase activity
BA953_04225	COG0446	pyridine nucleotide-disulphide oxidoreductase
BA953_04230	COG0616	signal peptide processing
BA953_04235	COG0252	asparaginase activity
BA953_04245	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BA953_04250	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BA953_04270	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA953_04275	COG3706	GGDEF domain
BA953_04285	COG4120	Belongs to the binding-protein-dependent transport system permease family
BA953_04320	COG0284	orotidine-5'-phosphate decarboxylase activity
BA953_04325	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BA953_04330	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BA953_04340	COG0539	negative regulation of cytoplasmic translation
BA953_04350	COG1555	photosystem II stabilization
BA953_04355	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA953_04360	COG0776	regulation of translation
BA953_04365	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BA953_04390	COG2204	response regulator
BA953_04400	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA953_04405	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA953_04410	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA953_04415	COG3842	ATPase activity
BA953_04430	COG1653	transport
BA953_04435	COG2205	protein histidine kinase activity
BA953_04440	COG0745	RESPONSE REGULATOR receiver
BA953_04465	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BA953_04470	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BA953_04480	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BA953_04485	COG2832	Protein of unknown function (DUF454)
BA953_04490	COG0745	RESPONSE REGULATOR receiver
BA953_04495	COG0583	DNA-binding transcription factor activity
BA953_04500	COG0778	Nitroreductase
BA953_04510	COG0183	Belongs to the thiolase family
BA953_04525	COG2067	long-chain fatty acid transport protein
BA953_04530	COG2067	long-chain fatty acid transport protein
BA953_04535	COG2853	Lipoprotein
BA953_04545	COG4235	cytochrome complex assembly
BA953_04545	COG3088	subunit of a heme lyase
BA953_04550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BA953_04555	COG1138	Cytochrome C-type biogenesis protein
BA953_04565	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA953_04570	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA953_04575	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BA953_04580	COG4133	protoheme IX ABC transporter activity
BA953_04590	COG0835	chemotaxis
BA953_04600	COG1192	Involved in chromosome partitioning
BA953_04605	COG2201	protein-glutamate methylesterase activity
BA953_04610	COG2198	Histidine kinase
BA953_04610	COG0643	Histidine kinase
BA953_04615	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
BA953_04630	COG0455	bacterial-type flagellum organization
BA953_04645	COG2062	phosphohistidine phosphatase, SixA
BA953_04655	COG3102	Protein conserved in bacteria
BA953_04675	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BA953_04680	COG1918	ferrous iron import across plasma membrane
BA953_04685	COG4977	sequence-specific DNA binding
BA953_04690	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BA953_04695	COG1121	(ABC) transporter
BA953_04700	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BA953_04705	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BA953_04710	COG1286	toxin biosynthetic process
BA953_04715	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BA953_04720	COG0285	dihydrofolate synthase activity
BA953_04730	COG0101	tRNA pseudouridine synthase activity
BA953_04740	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BA953_04745	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BA953_04750	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BA953_04780	COG3101	peptidyl-lysine hydroxylation
BA953_04785	COG2860	membrane
BA953_04795	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BA953_04800	COG2890	protein-(glutamine-N5) methyltransferase activity
BA953_04815	COG1684	flagellar biosynthetic protein fliR
BA953_04820	COG1987	bacterial-type flagellum assembly
BA953_04870	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BA953_04880	COG1677	Flagellar hook-basal body complex protein FliE
BA953_04885	COG2204	response regulator
BA953_04890	COG4191	Histidine kinase
BA953_04895	COG2204	response regulator
BA953_04900	COG1516	flagellar protein fliS
BA953_04910	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BA953_04920	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA953_04935	COG2837	iron assimilation
BA953_04945	COG4235	cytochrome complex assembly
BA953_04945	COG3088	subunit of a heme lyase
BA953_04950	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BA953_04955	COG1138	Cytochrome C-type biogenesis protein
BA953_04960	COG3301	Polysulphide reductase, NrfD
BA953_04965	COG0437	4 iron, 4 sulfur cluster binding
BA953_04970	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
BA953_05000	COG1393	Belongs to the ArsC family
BA953_05005	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BA953_05020	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
BA953_05040	COG0745	RESPONSE REGULATOR receiver
BA953_05040	COG3706	GGDEF domain
BA953_05045	COG1611	Belongs to the LOG family
BA953_05050	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA953_05075	COG0583	DNA-binding transcription factor activity
BA953_05080	COG0301	tRNA thio-modification
BA953_05080	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA953_05090	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BA953_05100	COG0142	geranyltranstransferase activity
BA953_05110	COG0564	pseudouridine synthase activity
BA953_05115	COG3098	single-species biofilm formation
BA953_05145	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA953_05150	COG0567	Dehydrogenase, E1 component
BA953_05155	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BA953_05160	COG1053	succinate dehydrogenase
BA953_05165	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BA953_05170	COG2009	succinate dehydrogenase
BA953_05180	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BA953_05190	COG0033	Phosphoglucomutase
BA953_05195	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
BA953_05200	COG0596	Alpha beta hydrolase
BA953_05210	COG0716	FMN binding
BA953_05225	COG0167	dihydroorotate dehydrogenase activity
BA953_05240	COG1263	PTS System
BA953_05240	COG2190	(PTS) system
BA953_05240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA953_05245	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BA953_05250	COG1846	Transcriptional regulator
BA953_05250	COG1940	carbohydrate kinase activity
BA953_05255	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BA953_05255	COG4651	solute:proton antiporter activity
BA953_05260	COG0367	asparagine synthase
BA953_05265	COG3104	oligopeptide transport
BA953_05290	COG2840	Smr protein MutS2
BA953_05295	COG1187	pseudouridine synthase activity
BA953_05300	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BA953_05305	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BA953_05310	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BA953_05335	COG0047	phosphoribosylformylglycinamidine synthase activity
BA953_05335	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BA953_05340	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BA953_05350	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BA953_05370	COG4970	Tfp pilus assembly protein FimT
BA953_05385	COG0443	Heat shock 70 kDa protein
BA953_05390	COG1301	dicarboxylic acid transport
BA953_05395	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BA953_05405	COG0497	DNA recombination
BA953_05410	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA953_05420	COG2867	negative regulation of translational initiation
BA953_05435	COG0582	viral genome integration into host DNA
BA953_05440	COG1715	Restriction endonuclease
BA953_05455	COG0732	type I restriction modification DNA specificity domain
BA953_05460	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BA953_05495	COG1396	sequence-specific DNA binding
BA953_05500	COG3550	peptidyl-serine autophosphorylation
BA953_05510	COG2207	Transcriptional regulator
BA953_05515	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BA953_05570	COG1917	Cupin 2, conserved barrel domain protein
BA953_05570	COG4977	sequence-specific DNA binding
BA953_05585	COG0668	transmembrane transport
BA953_05590	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA953_05615	COG0204	Acyl-transferase
BA953_05620	COG0835	chemotaxis
BA953_05620	COG0784	Response regulator, receiver
BA953_05625	COG2873	o-acetylhomoserine
BA953_05645	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA953_05650	COG1115	amino acid carrier protein
BA953_05655	COG1584	GPR1 FUN34 yaaH family protein
BA953_05670	COG0516	GMP reductase activity
BA953_05670	COG0517	IMP dehydrogenase activity
BA953_05685	COG2203	Gaf domain
BA953_05685	COG2199	diguanylate cyclase activity
BA953_05695	COG1160	GTP binding
BA953_05700	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA953_05705	COG2976	Protein conserved in bacteria
BA953_05710	COG0124	histidyl-tRNA synthetase
BA953_05720	COG1426	Protein conserved in bacteria
BA953_05730	COG2166	iron-sulfur cluster assembly
BA953_05735	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BA953_05740	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BA953_05760	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BA953_05765	COG1074	ATP-dependent DNA helicase activity
BA953_05770	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BA953_05790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_05795	COG1309	transcriptional regulator
BA953_05800	COG3141	response to X-ray
BA953_05815	COG0704	Plays a role in the regulation of phosphate uptake
BA953_05820	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BA953_05825	COG0581	inorganic phosphate transmembrane transporter activity
BA953_05830	COG0573	inorganic phosphate transmembrane transporter activity
BA953_05835	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BA953_05840	COG0248	Ppx GppA phosphatase
BA953_05850	COG5002	protein histidine kinase activity
BA953_05855	COG0745	RESPONSE REGULATOR receiver
BA953_05870	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA953_05890	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA953_05895	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA953_05900	COG1862	Preprotein translocase
BA953_05910	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BA953_05915	COG0517	IMP dehydrogenase activity
BA953_05925	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BA953_05935	COG0450	alkyl hydroperoxide reductase
BA953_05940	COG2171	N-acyltransferase activity
BA953_05950	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_05960	COG2207	Transcriptional regulator
BA953_05965	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_05965	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_05965	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_05980	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA953_06000	COG1085	galactose-1-phosphate uridylyltransferase
BA953_06005	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BA953_06010	COG1609	Transcriptional regulator
BA953_06015	COG3250	beta-galactosidase activity
BA953_06020	COG2731	YhcH YjgK YiaL family protein
BA953_06025	COG0531	amino acid
BA953_06030	COG1309	transcriptional regulator
BA953_06045	COG3408	Glycogen debranching enzyme
BA953_06045	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
BA953_06055	COG2211	Major facilitator Superfamily
BA953_06060	COG1486	melibiose metabolic process
BA953_06065	COG2169	Transcriptional regulator
BA953_06130	COG4964	Belongs to the GSP D family
BA953_06165	COG2169	Transcriptional regulator
BA953_06170	COG1022	Amp-dependent synthetase and ligase
BA953_06175	COG0583	DNA-binding transcription factor activity
BA953_06185	COG0583	DNA-binding transcription factor activity
BA953_06190	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BA953_06200	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BA953_06205	COG2975	iron-sulfur cluster assembly
BA953_06210	COG0633	Ferredoxin
BA953_06215	COG0443	Heat shock 70 kDa protein
BA953_06230	COG0822	iron-sulfur transferase activity
BA953_06235	COG1104	cysteine desulfurase activity
BA953_06250	COG0483	inositol monophosphate 1-phosphatase activity
BA953_06290	COG0542	response to heat
BA953_06300	COG0564	pseudouridine synthase activity
BA953_06305	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA953_06310	COG0741	lytic transglycosylase activity
BA953_06315	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BA953_06320	COG0077	Prephenate dehydratase
BA953_06320	COG1605	Chorismate mutase
BA953_06325	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BA953_06330	COG5001	Diguanylate cyclase
BA953_06335	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BA953_06345	COG0741	lytic transglycosylase activity
BA953_06350	COG0488	(ABC) transporter
BA953_06360	COG0739	heme binding
BA953_06365	COG1605	Chorismate mutase
BA953_06365	COG0287	Prephenate dehydrogenase
BA953_06370	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA953_06375	COG3275	phosphorelay sensor kinase activity
BA953_06380	COG3279	Response regulator of the LytR AlgR family
BA953_06385	COG1472	Belongs to the glycosyl hydrolase 3 family
BA953_06390	COG1737	Transcriptional regulator
BA953_06410	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BA953_06420	COG1966	Carbon starvation protein
BA953_06425	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BA953_06430	COG1047	Peptidyl-prolyl cis-trans
BA953_06445	COG0196	riboflavin kinase activity
BA953_06450	COG0728	peptidoglycan biosynthetic process
BA953_06455	COG0268	Binds directly to 16S ribosomal RNA
BA953_06460	COG0640	Transcriptional regulator
BA953_06465	COG0583	DNA-binding transcription factor activity
BA953_06475	COG1283	sodium-dependent phosphate transmembrane transporter activity
BA953_06480	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BA953_06490	COG0730	response to heat
BA953_06505	COG3066	DNA modification
BA953_06515	COG0667	Aldo Keto reductase
BA953_06525	COG2204	response regulator
BA953_06535	COG1846	Transcriptional regulator
BA953_06560	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BA953_06565	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BA953_06570	COG2860	membrane
BA953_06575	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BA953_06605	COG0745	RESPONSE REGULATOR receiver
BA953_06615	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BA953_06625	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA953_06630	COG3025	triphosphatase activity
BA953_06635	COG1392	Phosphate transport regulator
BA953_06640	COG0306	phosphate transporter
BA953_06645	COG4991	sh3 domain protein
BA953_06655	COG3409	Peptidoglycan-binding domain 1 protein
BA953_06655	COG3267	Type II secretory pathway component ExeA
BA953_06665	COG0148	phosphopyruvate hydratase activity
BA953_06680	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BA953_06685	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BA953_06690	COG4999	Histidine kinase
BA953_06690	COG3850	Histidine kinase
BA953_06690	COG2205	protein histidine kinase activity
BA953_06690	COG3437	response regulator, receiver
BA953_06695	COG0736	holo-[acyl-carrier-protein] synthase activity
BA953_06705	COG1381	Involved in DNA repair and RecF pathway recombination
BA953_06710	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BA953_06720	COG0681	Belongs to the peptidase S26 family
BA953_06725	COG0481	GTPase activity
BA953_06730	COG3086	response to oxidative stress
BA953_06735	COG3026	antisigma factor binding
BA953_06745	COG1595	DNA-templated transcription, initiation
BA953_06750	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BA953_06780	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA953_06785	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA953_06795	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BA953_06805	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BA953_06815	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BA953_06820	COG2271	Major facilitator Superfamily
BA953_06825	COG0584	glycerophosphoryl diester phosphodiesterase
BA953_06830	COG0440	acetolactate synthase activity
BA953_06835	COG0028	Belongs to the TPP enzyme family
BA953_06840	COG1022	Amp-dependent synthetase and ligase
BA953_06845	COG0583	DNA-binding transcription factor activity
BA953_06865	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BA953_06870	COG0473	3-isopropylmalate dehydrogenase activity
BA953_06950	COG1854	S-ribosylhomocysteine lyase activity
BA953_06960	COG2918	glutathione biosynthetic process
BA953_06965	COG0612	Peptidase, M16
BA953_06970	COG1238	metal cluster binding
BA953_06975	COG2130	NADP-dependent
BA953_06980	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
BA953_06985	COG0511	ligase activity, forming carbon-carbon bonds
BA953_06985	COG5016	pyruvate
BA953_06990	COG3630	sodium ion export across plasma membrane
BA953_07040	COG0527	aspartate kinase activity
BA953_07050	COG2137	regulation of response to DNA damage stimulus
BA953_07055	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BA953_07060	COG1546	Belongs to the CinA family
BA953_07065	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BA953_07070	COG0795	lipopolysaccharide-transporting ATPase activity
BA953_07075	COG0795	lipopolysaccharide-transporting ATPase activity
BA953_07085	COG2927	DNA polymerase III (CHI subunit)
BA953_07090	COG0525	valine-tRNA ligase activity
BA953_07100	COG4269	membrane
BA953_07110	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA953_07115	COG0564	pseudouridine synthase activity
BA953_07125	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BA953_07130	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BA953_07145	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
BA953_07150	COG0251	oxidation-reduction process
BA953_07160	COG0039	L-malate dehydrogenase activity
BA953_07180	COG0589	response to stress
BA953_07200	COG2235	arginine
BA953_07205	COG0204	Acyl-transferase
BA953_07215	COG5007	Belongs to the BolA IbaG family
BA953_07225	COG2854	intermembrane phospholipid transfer
BA953_07230	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BA953_07235	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BA953_07240	COG1127	ABC transporter
BA953_07250	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BA953_07250	COG0517	IMP dehydrogenase activity
BA953_07255	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BA953_07265	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BA953_07270	COG1137	ATPase activity
BA953_07280	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BA953_07285	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_07295	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_07300	COG2239	Acts as a magnesium transporter
BA953_07305	COG1410	methionine synthase
BA953_07305	COG0646	methionine synthase
BA953_07365	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA953_07370	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BA953_07400	COG3437	response regulator, receiver
BA953_07405	COG5002	protein histidine kinase activity
BA953_07405	COG2205	protein histidine kinase activity
BA953_07405	COG0784	Response regulator, receiver
BA953_07410	COG0735	belongs to the Fur family
BA953_07420	COG0529	Catalyzes the synthesis of activated sulfate
BA953_07425	COG3273	potassium ion transport
BA953_07425	COG0471	metal ion transport
BA953_07440	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BA953_07440	COG1648	precorrin-2 dehydrogenase activity
BA953_07445	COG0737	Belongs to the 5'-nucleotidase family
BA953_07455	COG2153	protein acetylation
BA953_07470	COG0545	Peptidyl-prolyl cis-trans isomerase
BA953_07480	COG0203	ribosomal protein L17
BA953_07495	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BA953_07500	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BA953_07510	COG0201	protein transport
BA953_07520	COG1841	ribosomal large subunit assembly
BA953_07535	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BA953_07550	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BA953_07580	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BA953_07585	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BA953_07605	COG0088	Forms part of the polypeptide exit tunnel
BA953_07615	COG0051	transcription antitermination factor activity, RNA binding
BA953_07620	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA953_07625	COG0557	exoribonuclease II activity
BA953_07630	COG0402	S-adenosylhomocysteine deaminase activity
BA953_07635	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BA953_07640	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BA953_07650	COG1047	Peptidyl-prolyl cis-trans
BA953_07665	COG2249	NAD(P)H dehydrogenase (quinone) activity
BA953_07670	COG0488	(ABC) transporter
BA953_07680	COG0429	hydrolase of the alpha beta-hydrolase fold
BA953_07690	COG3954	Phosphoribulokinase
BA953_07695	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA953_07715	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BA953_07740	COG1027	Aspartate ammonia-lyase
BA953_07745	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BA953_07750	COG1288	antiporter activity
BA953_07765	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BA953_07770	COG0540	Belongs to the ATCase OTCase family
BA953_07775	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
BA953_07780	COG1438	arginine binding
BA953_07785	COG4232	protein-disulfide reductase activity
BA953_07795	COG2095	MarC family integral membrane protein
BA953_07805	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA953_07815	COG2205	protein histidine kinase activity
BA953_07815	COG0784	Response regulator, receiver
BA953_07820	COG2814	Major facilitator Superfamily
BA953_07835	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA953_07840	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BA953_07845	COG0511	ligase activity, forming carbon-carbon bonds
BA953_07850	COG0439	Biotin carboxylase
BA953_07855	COG2264	protein methyltransferase activity
BA953_07860	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BA953_07865	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BA953_07870	COG3706	GGDEF domain
BA953_07875	COG0789	Transcriptional regulator
BA953_07885	COG0151	Belongs to the GarS family
BA953_07900	COG1253	flavin adenine dinucleotide binding
BA953_07905	COG3068	Protein conserved in bacteria
BA953_07910	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BA953_07915	COG1573	uracil-dna glycosylase
BA953_07920	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BA953_07925	COG1695	Transcriptional regulator
BA953_07930	COG1045	serine acetyltransferase
BA953_07945	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA953_07980	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA953_07985	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
BA953_07990	COG1053	succinate dehydrogenase
BA953_07995	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BA953_08000	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
BA953_08025	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BA953_08030	COG1609	Transcriptional regulator
BA953_08035	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BA953_08045	COG0281	malic enzyme
BA953_08055	COG0626	cystathionine gamma-synthase activity
BA953_08060	COG0460	homoserine dehydrogenase
BA953_08060	COG0527	aspartate kinase activity
BA953_08065	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BA953_08075	COG1494	fructose-1,6-bisphosphatase
BA953_08085	COG2801	Transposase and inactivated derivatives
BA953_08100	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BA953_08105	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
BA953_08120	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BA953_08125	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BA953_08125	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BA953_08130	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BA953_08135	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BA953_08140	COG2801	Transposase and inactivated derivatives
BA953_08185	COG0367	asparagine synthase
BA953_08215	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BA953_08225	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BA953_08230	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BA953_08260	COG0859	PFAM glycosyl transferase family 9
BA953_08275	COG1519	Transferase
BA953_08290	COG3642	lipopolysaccharide core region biosynthetic process
BA953_08295	COG0859	PFAM glycosyl transferase family 9
BA953_08300	COG0463	Glycosyl transferase, family 2
BA953_08305	COG0859	PFAM glycosyl transferase family 9
BA953_08310	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BA953_08335	COG2003	Belongs to the UPF0758 family
BA953_08340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BA953_08345	COG1309	transcriptional regulator
BA953_08350	COG1560	Kdo2-lipid A biosynthetic process
BA953_08355	COG1560	Kdo2-lipid A biosynthetic process
BA953_08360	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BA953_08370	COG1561	YicC-like family, N-terminal region
BA953_08375	COG2252	PERMEase
BA953_08385	COG0848	biopolymer transport protein
BA953_08405	COG1629	transport
BA953_08405	COG4206	TonB-dependent receptor
BA953_08415	COG1595	DNA-templated transcription, initiation
BA953_08430	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BA953_08435	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA953_08440	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BA953_08445	COG1218	3'(2'),5'-bisphosphate nucleotidase
BA953_08450	COG0494	nUDIX hydrolase
BA953_08455	COG0316	Belongs to the HesB IscA family
BA953_08455	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BA953_08465	COG0596	Alpha beta hydrolase
BA953_08475	COG2183	response to ionizing radiation
BA953_08485	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA953_08490	COG0745	RESPONSE REGULATOR receiver
BA953_08505	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA953_08510	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BA953_08515	COG3156	type II secretion system protein K
BA953_08520	COG4795	General secretion pathway protein
BA953_08525	COG2165	general secretion pathway protein
BA953_08530	COG2165	general secretion pathway protein
BA953_08535	COG2165	general secretion pathway protein
BA953_08540	COG1459	type II secretion system
BA953_08545	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA953_08555	COG3031	protein transport across the cell outer membrane
BA953_08560	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BA953_08570	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BA953_08580	COG0456	acetyltransferase
BA953_08585	COG1490	D-aminoacyl-tRNA deacylase activity
BA953_08605	COG0174	glutamine synthetase
BA953_08610	COG3852	Histidine kinase
BA953_08615	COG2204	response regulator
BA953_08625	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BA953_08665	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BA953_08680	COG0408	coproporphyrinogen oxidase activity
BA953_08690	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BA953_08695	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BA953_08700	COG0551	DNA topoisomerase type I activity
BA953_08705	COG2922	Belongs to the Smg family
BA953_08710	COG0758	DNA mediated transformation
BA953_08725	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BA953_08725	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BA953_08730	COG0569	domain protein
BA953_08735	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA953_08745	COG1272	protein, Hemolysin III
BA953_08750	COG4326	sporulation control protein
BA953_08760	COG3084	Protein conserved in bacteria
BA953_08880	COG2932	Transcriptional regulator
BA953_08885	COG4974	Belongs to the 'phage' integrase family
BA953_08890	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BA953_08895	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA953_08900	COG3385	transposase activity
BA953_08905	COG0204	Acyl-transferase
BA953_08915	COG0606	chelatase, subunit chli
BA953_08925	COG3978	acetolactate synthase activity
BA953_08930	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BA953_08935	COG0129	dihydroxy-acid dehydratase activity
BA953_08945	COG0604	alcohol dehydrogenase
BA953_08960	COG0425	Belongs to the sulfur carrier protein TusA family
BA953_08970	COG2119	membrane
BA953_08980	COG0751	glycine-tRNA ligase activity
BA953_08985	COG3977	Valine--pyruvate aminotransferase
BA953_08990	COG0071	Belongs to the small heat shock protein (HSP20) family
BA953_08995	COG0187	DNA topoisomerase II activity
BA953_09000	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BA953_09005	COG0592	DNA-directed DNA polymerase activity
BA953_09025	COG1126	abc transporter atp-binding protein
BA953_09040	COG0706	membrane insertase activity
BA953_09045	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BA953_09050	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BA953_09055	COG0445	tRNA wobble uridine modification
BA953_09065	COG1192	Involved in chromosome partitioning
BA953_09070	COG1475	DNA binding
BA953_09075	COG3312	ion transport
BA953_09095	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BA953_09100	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BA953_09105	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BA953_09110	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BA953_09115	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BA953_09125	COG0765	amino acid transport
BA953_09135	COG2814	Major facilitator Superfamily
BA953_09140	COG0583	DNA-binding transcription factor activity
BA953_09145	COG3706	GGDEF domain
BA953_09150	COG0183	Belongs to the thiolase family
BA953_09160	COG1739	Uncharacterized protein family UPF0029
BA953_09165	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BA953_09220	COG2132	Multicopper oxidase
BA953_09240	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BA953_09250	COG2022	thiamine diphosphate biosynthetic process
BA953_09260	COG0006	proline dipeptidase activity
BA953_09260	COG0006	proline dipeptidase activity
BA953_09280	COG1522	sequence-specific DNA binding
BA953_09285	COG5002	protein histidine kinase activity
BA953_09285	COG5001	Diguanylate cyclase
BA953_09290	COG0742	ribosomal rna small subunit methyltransferase
BA953_09300	COG0697	spore germination
BA953_09305	COG0589	response to stress
BA953_09310	COG1528	Iron-storage protein
BA953_09320	COG2081	HI0933 family
BA953_09350	COG1639	'signal transduction protein
BA953_09360	COG1322	Protein conserved in bacteria
BA953_09390	COG0805	protein transport
BA953_09395	COG0084	hydrolase, TatD family'
BA953_09410	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA953_09410	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BA953_09415	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BA953_09440	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BA953_09445	COG0583	DNA-binding transcription factor activity
BA953_09455	COG2960	long-chain fatty acid transporting porin activity
BA953_09460	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA953_09465	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_09470	COG1309	transcriptional regulator
BA953_09515	COG0747	negative chemotaxis
BA953_09525	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA953_09540	COG0745	RESPONSE REGULATOR receiver
BA953_09555	COG0477	Major facilitator Superfamily
BA953_09565	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_09565	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_09565	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_09570	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_09575	COG3537	Alpha-1,2-mannosidase
BA953_09585	COG3537	Alpha-1,2-mannosidase
BA953_09590	COG2207	Transcriptional regulator
BA953_09600	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_09605	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_09610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA953_09615	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BA953_09635	COG3220	belongs to the UPF0276 family
BA953_09645	COG0210	DNA helicase
BA953_09660	COG0405	Gamma-glutamyltransferase
BA953_09665	COG1280	lysine exporter protein (LysE YggA)
BA953_09675	COG2962	Rard protein
BA953_09680	COG0514	ATP-dependent DNA helicase (RecQ)
BA953_09690	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BA953_09695	COG0248	Ppx GppA phosphatase
BA953_09705	COG3118	belongs to the thioredoxin family
BA953_09710	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BA953_09720	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BA953_09780	COG3071	HemY protein
BA953_09785	COG2959	enzyme of heme biosynthesis
BA953_09790	COG1587	Uroporphyrinogen-III synthase
BA953_09800	COG3072	Adenylate cyclase
BA953_09805	COG1965	Belongs to the frataxin family
BA953_09815	COG0019	diaminopimelate decarboxylase activity
BA953_09820	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BA953_09830	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BA953_09835	COG1011	Hydrolase
BA953_09840	COG2199	diguanylate cyclase activity
BA953_09840	COG2200	EAL domain
BA953_09840	COG3287	FIST C domain
BA953_09860	COG0561	phosphatase activity
BA953_09870	COG1280	lysine exporter protein (LysE YggA)
BA953_09875	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BA953_09880	COG0640	Transcriptional regulator
BA953_09885	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BA953_09930	COG2095	MarC family integral membrane protein
BA953_09940	COG0742	ribosomal rna small subunit methyltransferase
BA953_09945	COG0552	protein localization to endoplasmic reticulum
BA953_09950	COG2884	Cell division ATP-binding protein ftsE
BA953_09955	COG2177	Part of the ABC transporter FtsEX involved in
BA953_09960	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA953_09965	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA953_09975	COG1580	Controls the rotational direction of flagella during chemotaxis
BA953_09980	COG3161	chorismate lyase activity
BA953_09985	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BA953_09990	COG2937	Belongs to the GPAT DAPAT family
BA953_09995	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BA953_10000	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BA953_10010	COG0534	Mate efflux family protein
BA953_10045	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BA953_10140	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BA953_10150	COG0137	argininosuccinate synthase activity
BA953_10155	COG0165	Argininosuccinate lyase
BA953_10155	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BA953_10165	COG0251	oxidation-reduction process
BA953_10170	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA953_10175	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BA953_10175	COG0678	peroxiredoxin activity
BA953_10185	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BA953_10230	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BA953_10235	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BA953_10240	COG0546	phosphoglycolate phosphatase activity
BA953_10245	COG0180	Tryptophanyl-tRNA synthetase
BA953_10250	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BA953_10255	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BA953_10260	COG2205	protein histidine kinase activity
BA953_10265	COG0745	RESPONSE REGULATOR receiver
BA953_10270	COG3678	ATP-independent chaperone mediated protein folding
BA953_10280	COG0205	6-phosphofructokinase activity
BA953_10285	COG1285	pathogenesis
BA953_10295	COG1509	lysine 2,3-aminomutase activity
BA953_10300	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BA953_10305	COG1575	Belongs to the MenA family. Type 1 subfamily
BA953_10310	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA953_10315	COG0534	Mate efflux family protein
BA953_10320	COG0149	triose-phosphate isomerase activity
BA953_10335	COG1072	(Pantothenic acid kinase))
BA953_10360	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BA953_10370	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BA953_10375	COG0250	Participates in transcription elongation, termination and antitermination
BA953_10390	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BA953_10400	COG0085	RNA polymerase activity
BA953_10410	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BA953_10415	COG2816	NAD+ diphosphatase activity
BA953_10435	COG4942	peptidase
BA953_10450	COG0840	transmembrane signaling receptor activity
BA953_10455	COG0471	metal ion transport
BA953_10455	COG0490	domain, Protein
BA953_10460	COG0688	phosphatidylethanolamine metabolic process
BA953_10465	COG1162	GTPase activity
BA953_10470	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BA953_10525	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BA953_10530	COG0802	atpase or kinase
BA953_10540	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BA953_10555	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BA953_10560	COG0330	HflC and HflK could
BA953_10565	COG0330	HflC and HflK could
BA953_10570	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BA953_10585	COG0545	Peptidyl-prolyl cis-trans isomerase
BA953_10590	COG2964	Protein conserved in bacteria
BA953_10600	COG2923	Belongs to the DsrF TusC family
BA953_10605	COG2168	tRNA wobble position uridine thiolation
BA953_10615	COG0049	tRNA binding
BA953_10620	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BA953_10625	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BA953_10635	COG0360	Binds together with S18 to 16S ribosomal RNA
BA953_10655	COG0305	Participates in initiation and elongation during chromosome replication
BA953_10660	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BA953_10665	COG0432	Pfam Uncharacterised protein family UPF0047
BA953_10690	COG1136	(ABC) transporter
BA953_10705	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BA953_10715	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA953_10720	COG0729	surface antigen
BA953_10730	COG2105	PFAM AIG2 family protein
BA953_10745	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BA953_10750	COG0163	prenyltransferase activity
BA953_10755	COG4143	(ABC) transporter
BA953_10760	COG1178	ABC-type Fe3 transport system permease component
BA953_10765	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
BA953_10770	COG3028	Belongs to the UPF0307 family
BA953_10775	COG0312	modulator of DNA gyrase
BA953_10780	COG0527	aspartate kinase activity
BA953_10785	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BA953_10795	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BA953_10810	COG0629	single-stranded DNA binding
BA953_10815	COG2199	diguanylate cyclase activity
BA953_10815	COG2200	EAL domain
BA953_10840	COG3267	Type II secretory pathway component ExeA
BA953_10840	COG3409	Peptidoglycan-binding domain 1 protein
BA953_10850	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA953_10855	COG1459	type II secretion system
BA953_10900	COG1077	Cell shape determining protein MreB Mrl
BA953_10905	COG1792	Involved in formation and maintenance of cell shape
BA953_10910	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BA953_10915	COG0424	maF-like protein
BA953_10920	COG1530	ribonuclease E activity
BA953_10925	COG3164	Protein of unknown function
BA953_10930	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA953_10935	COG0312	modulator of DNA gyrase
BA953_10990	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BA953_11000	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BA953_11005	COG2066	Belongs to the glutaminase family
BA953_11010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BA953_11030	COG0762	integral membrane protein
BA953_11035	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BA953_11040	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BA953_11055	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BA953_11060	COG1678	Uncharacterized ACR, COG1678
BA953_11065	COG0189	ligase activity
BA953_11070	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BA953_11075	COG2356	endonuclease I
BA953_11080	COG3091	SprT-like family
BA953_11090	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BA953_11095	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA953_11110	COG0191	fructose-bisphosphate aldolase activity
BA953_11115	COG0668	transmembrane transport
BA953_11130	COG0583	DNA-binding transcription factor activity
BA953_11140	COG3706	GGDEF domain
BA953_11150	COG0469	pyruvate kinase activity
BA953_11155	COG1349	DNA-binding transcription factor activity
BA953_11160	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BA953_11175	COG5002	protein histidine kinase activity
BA953_11180	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA953_11190	COG0142	geranyltranstransferase activity
BA953_11195	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BA953_11200	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BA953_11205	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BA953_11210	COG2966	Psort location CytoplasmicMembrane, score
BA953_11215	COG3610	response to peptide
BA953_11225	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BA953_11240	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BA953_11245	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA953_11250	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BA953_11255	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BA953_11265	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA953_11270	COG0358	DNA primase activity
BA953_11275	COG1610	YqeY-like protein
BA953_11280	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BA953_11285	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BA953_11290	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BA953_11295	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BA953_11300	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BA953_11305	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BA953_11315	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BA953_11320	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BA953_11330	COG0585	pseudouridine synthase activity
BA953_11335	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BA953_11345	COG4942	peptidase
BA953_11345	COG1388	LysM domain
BA953_11350	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BA953_11355	COG4536	flavin adenine dinucleotide binding
BA953_11360	COG4137	Cytochrome C assembly protein
BA953_11365	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BA953_11370	COG0228	four-way junction DNA binding
BA953_11380	COG0336	Belongs to the RNA methyltransferase TrmD family
BA953_11390	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BA953_11395	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
BA953_11400	COG0237	dephospho-CoA kinase activity
BA953_11410	COG1459	type II secretion system
BA953_11415	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BA953_11420	COG4969	Belongs to the N-Me-Phe pilin family
BA953_11425	COG0157	Belongs to the NadC ModD family
BA953_11430	COG3023	N-Acetylmuramoyl-L-alanine amidase
BA953_11435	COG0716	FMN binding
BA953_11445	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BA953_11450	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BA953_11460	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BA953_11465	COG0508	dehydrogenase complex catalyzes the overall conversion of
BA953_11470	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA953_11485	COG0288	reversible hydration of carbon dioxide
BA953_11490	COG0659	secondary active sulfate transmembrane transporter activity
BA953_11495	COG1131	(ABC) transporter
BA953_11500	COG0842	Transport permease protein
BA953_11515	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BA953_11530	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BA953_11540	COG1643	Atp-dependent helicase
BA953_11555	COG1049	propionate catabolic process, 2-methylcitrate cycle
BA953_11570	COG0004	ammonium transporteR
BA953_11575	COG1840	ABC-type Fe3 transport system, periplasmic component
BA953_11585	COG3842	ATPase activity
BA953_11590	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA953_11605	COG2971	BadF BadG BcrA BcrD
BA953_11615	COG4608	Belongs to the ABC transporter superfamily
BA953_11620	COG0444	Belongs to the ABC transporter superfamily
BA953_11635	COG0747	negative chemotaxis
BA953_11645	COG2813	Specifically methylates the guanine in position
BA953_11650	COG0628	permease
BA953_11675	COG0739	heme binding
BA953_11680	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BA953_11690	COG2027	D-alanyl-D-alanine carboxypeptidase
BA953_11695	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BA953_11700	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA953_11705	COG1534	Rna-binding protein
BA953_11710	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BA953_11715	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BA953_11720	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BA953_11725	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA953_11750	COG0513	Belongs to the DEAD box helicase family
BA953_11765	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BA953_11770	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BA953_11795	COG3153	acetyltransferase
BA953_11800	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BA953_11815	COG0779	Required for maturation of 30S ribosomal subunits
BA953_11820	COG0195	Participates in both transcription termination and antitermination
BA953_11845	COG0493	'glutamate synthase
BA953_11850	COG0070	glutamate synthase
BA953_11850	COG0069	glutamate synthase activity
BA953_11850	COG0067	glutamate synthase
BA953_11860	COG0070	glutamate synthase
BA953_11860	COG0069	glutamate synthase activity
BA953_11860	COG0067	glutamate synthase
BA953_11865	COG1242	4 iron, 4 sulfur cluster binding
BA953_11870	COG5001	Diguanylate cyclase
BA953_11870	COG2203	Gaf domain
BA953_11870	COG3706	GGDEF domain
BA953_11870	COG4251	negative regulation of phosphorylation
BA953_11875	COG2198	Histidine kinase
BA953_11875	COG5002	protein histidine kinase activity
BA953_11875	COG0784	Response regulator, receiver
BA953_11885	COG1538	Outer membrane efflux protein
BA953_11890	COG0494	nUDIX hydrolase
BA953_11895	COG3151	Protein conserved in bacteria
BA953_11905	COG3150	esterase
BA953_11910	COG0187	DNA topoisomerase II activity
BA953_11920	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BA953_11925	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BA953_11930	COG3105	Protein conserved in bacteria
BA953_11935	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BA953_11950	COG0723	plastoquinol--plastocyanin reductase activity
BA953_11955	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BA953_11960	COG2857	Cytochrome c1
BA953_11965	COG0625	glutathione transferase activity
BA953_11970	COG2969	positive regulation of protein catabolic process
BA953_11980	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BA953_11990	COG3107	peptidoglycan biosynthetic process
BA953_11995	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BA953_12010	COG3116	cell division
BA953_12015	COG0768	penicillin binding
BA953_12020	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BA953_12025	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BA953_12030	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BA953_12035	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BA953_12040	COG0772	Belongs to the SEDS family
BA953_12055	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BA953_12060	COG0849	cell division
BA953_12065	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BA953_12070	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
BA953_12075	COG0653	protein targeting
BA953_12080	COG0494	nUDIX hydrolase
BA953_12090	COG0505	Belongs to the CarA family
BA953_12095	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BA953_12100	COG0730	response to heat
BA953_12105	COG0583	DNA-binding transcription factor activity
BA953_12120	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BA953_12135	COG1115	amino acid carrier protein
BA953_12140	COG3022	response to hydroperoxide
BA953_12145	COG0084	hydrolase, TatD family'
BA953_12150	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA953_12165	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BA953_12170	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BA953_12175	COG0813	purine-nucleoside phosphorylase activity
BA953_12185	COG0560	Phosphoserine phosphatase
BA953_12195	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BA953_12200	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BA953_12205	COG0693	protein deglycase activity
BA953_12210	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BA953_12225	COG1595	DNA-templated transcription, initiation
BA953_12240	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BA953_12250	COG2813	Specifically methylates the guanine in position
BA953_12255	COG0271	Belongs to the BolA IbaG family
BA953_12260	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BA953_12265	COG1805	sodium ion transport
BA953_12280	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BA953_12285	COG2871	sodium ion transport
BA953_12290	COG1477	protein flavinylation
BA953_12305	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BA953_12315	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BA953_12330	COG0733	neurotransmitter:sodium symporter activity
BA953_12340	COG0189	ligase activity
BA953_12345	COG0189	ligase activity
BA953_12345	COG4067	protein conserved in archaea
BA953_12350	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA953_12355	COG2252	PERMEase
BA953_12360	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BA953_12375	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BA953_12380	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BA953_12385	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BA953_12390	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA953_12390	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BA953_12415	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BA953_12420	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BA953_12435	COG0024	Methionine aminopeptidase
BA953_12440	COG0052	Belongs to the universal ribosomal protein uS2 family
BA953_12450	COG0528	UMP kinase activity
BA953_12455	COG0233	cytoplasmic translational termination
BA953_12460	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BA953_12465	COG0575	Belongs to the CDS family
BA953_12475	COG0750	zinc metalloprotease
BA953_12480	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BA953_12485	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BA953_12490	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BA953_12510	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BA953_12515	COG0587	DNA-directed DNA polymerase activity
BA953_12520	COG0825	malonyl-CoA metabolic process
BA953_12535	COG0347	Belongs to the P(II) protein family
BA953_12550	COG0741	lytic transglycosylase activity
BA953_12550	COG1388	LysM domain
BA953_12560	COG2226	methyltransferase
BA953_12570	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BA953_12580	COG1960	acyl-CoA dehydrogenase activity
BA953_12585	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BA953_12590	COG0121	glutamine amidotransferase
BA953_12600	COG1720	tRNA m6t6A37 methyltransferase activity
BA953_12615	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BA953_12625	COG1464	Belongs to the NlpA lipoprotein family
BA953_12630	COG2011	ABC-type metal ion transport system permease component
BA953_12635	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BA953_12640	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BA953_12650	COG1609	Transcriptional regulator
BA953_12655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA953_12655	COG1263	PTS System
BA953_12660	COG0366	Alpha amylase catalytic
BA953_12685	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_12690	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA953_12700	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BA953_12715	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BA953_12730	COG1686	Belongs to the peptidase S11 family
BA953_12735	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BA953_12740	COG0772	Belongs to the SEDS family
BA953_12745	COG0768	penicillin binding
BA953_12750	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BA953_12755	COG0799	negative regulation of ribosome biogenesis
BA953_12760	COG1466	dna polymerase III delta subunit
BA953_12765	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
BA953_12770	COG0495	leucyl-tRNA aminoacylation
BA953_12780	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BA953_12785	COG4535	Mg2 and Co2 transporter CorC
BA953_12790	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BA953_12795	COG1702	phosphate starvation-inducible protein PhoH
BA953_12805	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BA953_12810	COG2190	(PTS) system
BA953_12815	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BA953_12820	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_12825	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BA953_12830	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
BA953_12835	COG3115	cell septum assembly
BA953_12860	COG0330	HflC and HflK could
BA953_12865	COG3118	belongs to the thioredoxin family
BA953_12870	COG0300	oxidoreductase activity
BA953_12875	COG1090	epimerase
BA953_12900	COG0622	Phosphoesterase
BA953_12920	COG3710	Transcriptional regulator
BA953_12925	COG0326	Molecular chaperone. Has ATPase activity
BA953_12935	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BA953_12955	COG2608	mercury ion transmembrane transporter activity
BA953_12955	COG2217	Heavy metal translocating P-type atpase
BA953_12995	COG2194	sulfuric ester hydrolase activity
BA953_13005	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BA953_13045	COG2747	anti-sigma28 factor FlgM
BA953_13055	COG0784	Response regulator, receiver
BA953_13055	COG0835	chemotaxis
BA953_13060	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BA953_13065	COG1815	bacterial-type flagellum-dependent cell motility
BA953_13070	COG1558	bacterial-type flagellum-dependent cell motility
BA953_13075	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BA953_13080	COG1749	Flagellar hook protein flgE
BA953_13085	COG4787	bacterial-type flagellum-dependent cell motility
BA953_13090	COG4786	Flagellar basal body rod
BA953_13095	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BA953_13100	COG1706	bacterial-type flagellum-dependent cell motility
BA953_13105	COG3951	Flagellar rod assembly protein muramidase FlgJ
BA953_13105	COG1705	Flagellar rod assembly protein muramidase FlgJ
BA953_13115	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA953_13120	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA953_13235	COG0012	GTP binding
BA953_13245	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BA953_13270	COG2890	protein-(glutamine-N5) methyltransferase activity
BA953_13280	COG2912	Transglutaminase-like superfamily
BA953_13295	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BA953_13320	COG1393	Belongs to the ArsC family
BA953_13325	COG4783	chaperone-mediated protein folding
BA953_13345	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BA953_13350	COG2716	regulation of RNA biosynthetic process
BA953_13355	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA953_13365	COG2056	Na+-H+ antiporter family
BA953_13385	COG0346	lactoylglutathione lyase activity
BA953_13390	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BA953_13405	COG4658	electron transport chain
BA953_13410	COG4656	Part of a membrane complex involved in electron transport
BA953_13420	COG4657	Part of a membrane complex involved in electron transport
BA953_13445	COG1815	bacterial-type flagellum-dependent cell motility
BA953_13450	COG1558	bacterial-type flagellum-dependent cell motility
BA953_13455	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BA953_13460	COG1749	Flagellar hook protein flgE
BA953_13465	COG4787	bacterial-type flagellum-dependent cell motility
BA953_13470	COG4786	Flagellar basal body rod
BA953_13475	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BA953_13480	COG1706	bacterial-type flagellum-dependent cell motility
BA953_13510	COG1360	Flagellar Motor Protein
BA953_13515	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BA953_13520	COG1191	sigma factor activity
BA953_13525	COG1580	Controls the rotational direction of flagella during chemotaxis
BA953_13540	COG1516	flagellar protein fliS
BA953_13545	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BA953_13550	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BA953_13565	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BA953_13575	COG1987	bacterial-type flagellum assembly
BA953_13595	COG2885	chlorophyll binding
BA953_13600	COG2204	response regulator
BA953_13615	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BA953_13640	COG0739	heme binding
BA953_13675	COG2977	Belongs to the P-Pant transferase superfamily
BA953_13705	COG0328	RNA-DNA hybrid ribonuclease activity
BA953_13755	COG0582	viral genome integration into host DNA
BA953_13765	COG0556	nucleotide-excision repair
BA953_13775	COG2198	Histidine kinase
BA953_13780	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BA953_13785	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BA953_13790	COG0521	Mo-molybdopterin cofactor biosynthetic process
BA953_13795	COG0315	cyclic pyranopterin monophosphate synthase activity
BA953_13800	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BA953_13805	COG0314	molybdopterin synthase activity
BA953_13820	COG0517	IMP dehydrogenase activity
BA953_13870	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA953_13870	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA953_13875	COG0489	protein tyrosine kinase activity
BA953_13880	COG0572	uridine kinase
BA953_13885	COG2982	Protein involved in outer membrane biogenesis
BA953_13895	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BA953_13905	COG0302	gtp cyclohydrolase
BA953_13910	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BA953_13915	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BA953_13915	COG0302	gtp cyclohydrolase
BA953_13920	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BA953_13940	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BA953_13945	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA953_13955	COG1881	PFAM PEBP family protein
BA953_13965	COG0123	including yeast histone deacetylase and acetoin utilization protein
BA953_13995	COG3852	Histidine kinase
BA953_14010	COG0840	transmembrane signaling receptor activity
BA953_14030	COG3083	sulfuric ester hydrolase activity
BA953_14035	COG3082	Protein of unknown function (DUF1414)
BA953_14060	COG1757	Na H antiporter
BA953_14065	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BA953_14070	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BA953_14075	COG2095	MarC family integral membrane protein
BA953_14080	COG1012	belongs to the aldehyde dehydrogenase family
BA953_14080	COG1454	alcohol dehydrogenase
BA953_14090	COG2894	cell division
BA953_14095	COG0850	regulation of cytokinetic process
BA953_14100	COG3100	YcgL domain-containing protein
BA953_14105	COG2951	lytic endotransglycosylase activity
BA953_14110	COG0583	DNA-binding transcription factor activity
BA953_14115	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA953_14125	COG2983	Belongs to the UPF0260 family
BA953_14130	COG0668	transmembrane transport
BA953_14150	COG1785	Belongs to the alkaline phosphatase family
BA953_14165	COG2226	methyltransferase
BA953_14170	COG0840	transmembrane signaling receptor activity
BA953_14185	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA953_14195	COG3139	Protein of unknown function (DUF1315)
BA953_14200	COG3012	SEC-C Motif Domain Protein
BA953_14205	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BA953_14215	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BA953_14220	COG0215	cysteine-tRNA ligase activity
BA953_14225	COG1435	thymidine kinase activity
BA953_14230	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BA953_14235	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BA953_14260	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BA953_14265	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BA953_14290	COG3070	regulator of competence-specific genes
BA953_14305	COG0745	RESPONSE REGULATOR receiver
BA953_14310	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BA953_14315	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA953_14325	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BA953_14330	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
BA953_14360	COG0189	ligase activity
BA953_14360	COG4067	protein conserved in archaea
BA953_14365	COG0500	methyltransferase
BA953_14375	COG1801	Protein of unknown function DUF72
BA953_14385	COG1187	pseudouridine synthase activity
BA953_14395	COG1278	Cold shock
BA953_14400	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BA953_14405	COG0542	response to heat
BA953_14430	COG2116	formate transmembrane transporter activity
BA953_14435	COG0390	transport system, permease component
BA953_14440	COG4459	periplasmic nitrate reductase
BA953_14445	COG3005	denitrification pathway
BA953_14450	COG0243	molybdopterin cofactor binding
BA953_14465	COG4221	oxidoreductase activity
BA953_14485	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BA953_14490	COG0840	transmembrane signaling receptor activity
BA953_14495	COG0632	four-way junction helicase activity
BA953_14500	COG2255	four-way junction helicase activity
BA953_14505	COG1271	oxidase subunit
BA953_14510	COG1294	oxidase, subunit
BA953_14515	COG4890	Cyd operon protein YbgT
BA953_14525	COG0824	Thioesterase
BA953_14530	COG0811	peptide transport
BA953_14550	COG2885	chlorophyll binding
BA953_14555	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BA953_14560	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BA953_14565	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BA953_14575	COG5640	endopeptidase activity
BA953_14590	COG5002	protein histidine kinase activity
BA953_14590	COG0784	Response regulator, receiver
BA953_14610	COG1902	pentaerythritol trinitrate reductase activity
BA953_14615	COG1881	PFAM PEBP family protein
BA953_14620	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BA953_14635	COG1940	carbohydrate kinase activity
BA953_14650	COG3850	Histidine kinase
BA953_14650	COG5002	protein histidine kinase activity
BA953_14655	COG0745	RESPONSE REGULATOR receiver
BA953_14660	COG0463	Glycosyl transferase, family 2
BA953_14665	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BA953_14680	COG1960	acyl-CoA dehydrogenase activity
BA953_14685	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BA953_14695	COG0708	Exodeoxyribonuclease III
BA953_14700	COG0840	transmembrane signaling receptor activity
BA953_14705	COG2850	peptidyl-arginine hydroxylation
BA953_14720	COG0730	response to heat
BA953_14725	COG1199	ATP-dependent helicase activity
BA953_14740	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA953_14755	COG1073	alpha beta
BA953_14755	COG2226	methyltransferase
BA953_14760	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BA953_14790	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BA953_14800	COG2268	Band 7 protein
BA953_14810	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BA953_14820	COG0482	sulfurtransferase activity
BA953_14830	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA953_14840	COG1757	Na H antiporter
BA953_14850	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BA953_14860	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BA953_14860	COG0131	Imidazoleglycerol-phosphate dehydratase
BA953_14865	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BA953_14870	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BA953_14875	COG0107	imidazoleglycerol-phosphate synthase activity
BA953_14880	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BA953_14880	COG0140	phosphoribosyl-ATP diphosphatase activity
BA953_14885	COG0217	transcriptional regulatory protein
BA953_14895	COG1227	inorganic diphosphatase activity
BA953_14910	COG4172	Belongs to the ABC transporter superfamily
BA953_14920	COG4171	peptide transport system, permease
BA953_14925	COG4168	peptide transport system, permease
BA953_14935	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BA953_14940	COG1842	Phage shock protein A
BA953_14950	COG1983	PspC domain protein
BA953_14970	COG2818	Glycosylase
BA953_14980	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
BA953_14985	COG0626	cystathionine gamma-synthase activity
BA953_14995	COG0733	neurotransmitter:sodium symporter activity
BA953_15000	COG0564	pseudouridine synthase activity
BA953_15005	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BA953_15010	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BA953_15015	COG4136	ATPase activity
BA953_15020	COG4135	transport system, permease component
BA953_15035	COG3313	Fe-S protein
BA953_15050	COG2350	Protein conserved in bacteria
BA953_15055	COG1607	acyl-coa hydrolase
BA953_15085	COG3099	Belongs to the UPF0263 family
BA953_15090	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BA953_15120	COG2197	response regulator
BA953_15125	COG0322	excinuclease ABC activity
BA953_15155	COG1902	pentaerythritol trinitrate reductase activity
BA953_15165	COG2133	pyrroloquinoline quinone binding
BA953_15190	COG3706	GGDEF domain
BA953_15200	COG0072	phenylalanine-tRNA ligase activity
BA953_15200	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA953_15255	COG1741	Belongs to the pirin family
BA953_15260	COG1335	isochorismatase
BA953_15270	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BA953_15275	COG3710	Transcriptional regulator
BA953_15295	COG0583	DNA-binding transcription factor activity
BA953_15320	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BA953_15335	COG0583	DNA-binding transcription factor activity
BA953_15345	COG0277	FAD linked oxidase domain protein
BA953_15355	COG4211	Belongs to the binding-protein-dependent transport system permease family
BA953_15360	COG1129	ABC transporter
BA953_15370	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA953_15375	COG3962	Belongs to the TPP enzyme family
BA953_15415	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BA953_15420	COG0183	Belongs to the thiolase family
BA953_15435	COG0583	DNA-binding transcription factor activity
BA953_15440	COG2814	Major facilitator Superfamily
BA953_15440	COG0477	Major facilitator Superfamily
BA953_15455	COG3962	Belongs to the TPP enzyme family
BA953_15460	COG0673	inositol 2-dehydrogenase activity
BA953_15465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA953_15490	COG3718	enzyme involved in inositol metabolism
BA953_15495	COG0673	inositol 2-dehydrogenase activity
BA953_15505	COG1216	Glycosyl transferase, family 2
BA953_15510	COG2223	nitrite transmembrane transporter activity
BA953_15520	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BA953_15530	COG3437	response regulator, receiver
BA953_15535	COG0488	(ABC) transporter
BA953_15550	COG1858	cytochrome C peroxidase
BA953_15555	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA953_15560	COG1737	Transcriptional regulator
BA953_15565	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BA953_15570	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
BA953_15580	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA953_15620	COG0745	RESPONSE REGULATOR receiver
BA953_15625	COG2205	protein histidine kinase activity
BA953_15640	COG1609	Transcriptional regulator
BA953_15645	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BA953_15660	COG1609	Transcriptional regulator
BA953_15685	COG2267	carboxylic ester hydrolase activity
BA953_15690	COG0583	DNA-binding transcription factor activity
BA953_15700	COG1012	belongs to the aldehyde dehydrogenase family
BA953_15710	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA953_15735	COG0583	DNA-binding transcription factor activity
BA953_15750	COG0352	thiamine-phosphate diphosphorylase activity
BA953_15755	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BA953_15760	COG1280	lysine exporter protein (LysE YggA)
BA953_15765	COG1115	amino acid carrier protein
BA953_15790	COG5001	Diguanylate cyclase
BA953_15790	COG3300	MHYT domain
BA953_15845	COG0778	Nitroreductase
BA953_15850	COG4580	involved in the transport of maltose and maltodextrins
BA953_15865	COG0519	Catalyzes the synthesis of GMP from XMP
BA953_15870	COG0242	peptide deformylase activity
BA953_15920	COG0307	riboflavin synthase, alpha
BA953_15965	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BA953_15970	COG0583	DNA-binding transcription factor activity
BA953_16000	COG0463	Glycosyl transferase, family 2
BA953_16020	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_16025	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA953_16050	COG2205	protein histidine kinase activity
BA953_16065	COG1061	Type III restriction enzyme res subunit
BA953_16075	COG2814	Major facilitator Superfamily
BA953_16085	COG0702	epimerase
BA953_16090	COG0534	Mate efflux family protein
BA953_16095	COG1136	(ABC) transporter
BA953_16140	COG0019	diaminopimelate decarboxylase activity
BA953_16165	COG0633	Ferredoxin
BA953_16170	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA953_16175	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BA953_16180	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA953_16230	COG0484	heat shock protein binding
BA953_16240	COG5001	Diguanylate cyclase
BA953_16240	COG3300	MHYT domain
BA953_16245	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BA953_16255	COG4181	ATPase activity
BA953_16260	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BA953_16265	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BA953_16270	COG1984	allophanate hydrolase subunit 2
BA953_16280	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BA953_16295	COG3005	denitrification pathway
BA953_16305	COG0243	molybdopterin cofactor binding
BA953_16315	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BA953_16320	COG3850	Histidine kinase
BA953_16325	COG2197	response regulator
BA953_16330	COG3069	C4-dicarboxylate transmembrane transporter activity
BA953_16335	COG2200	EAL domain
BA953_16355	COG3038	cytochrome b561
BA953_16360	COG2353	YceI-like domain
BA953_16365	COG2116	formate transmembrane transporter activity
BA953_16370	COG0583	DNA-binding transcription factor activity
BA953_16380	COG3593	DNA synthesis involved in DNA repair
BA953_16385	COG0737	Belongs to the 5'-nucleotidase family
BA953_16415	COG1605	Chorismate mutase
BA953_16430	COG0745	RESPONSE REGULATOR receiver
BA953_16435	COG2205	protein histidine kinase activity
BA953_16435	COG0784	Response regulator, receiver
BA953_16440	COG0840	transmembrane signaling receptor activity
BA953_16450	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BA953_16465	COG4783	chaperone-mediated protein folding
BA953_16470	COG2050	protein possibly involved in aromatic compounds catabolism
BA953_16490	COG4771	TonB-dependent receptor
BA953_16490	COG1629	transport
BA953_16495	COG0583	DNA-binding transcription factor activity
BA953_16500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA953_16500	COG0045	succinate-CoA ligase (ADP-forming) activity
BA953_16500	COG1042	CoA-binding domain protein
BA953_16505	COG3266	domain, Protein
BA953_16510	COG1181	Belongs to the D-alanine--D-alanine ligase family
BA953_16525	COG0023	Translation Initiation Factor
BA953_16645	COG2801	Transposase and inactivated derivatives
BA953_16665	COG0745	RESPONSE REGULATOR receiver
BA953_16675	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BA953_16680	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BA953_16695	COG3706	GGDEF domain
BA953_16700	COG2203	Gaf domain
BA953_16700	COG5001	Diguanylate cyclase
BA953_16700	COG3706	GGDEF domain
BA953_16700	COG4251	negative regulation of phosphorylation
BA953_16710	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BA953_16715	COG4149	molybdate abc transporter
BA953_16720	COG0725	ABC transporter, periplasmic molybdate-binding protein
BA953_16740	COG1609	Transcriptional regulator
BA953_16745	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_16745	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_16750	COG1105	Belongs to the carbohydrate kinase PfkB family
BA953_16755	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_16755	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_16755	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BA953_16760	COG3706	GGDEF domain
BA953_16765	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BA953_16770	COG2207	Transcriptional regulator
BA953_16775	COG1979	alcohol dehydrogenase
BA953_16790	COG2205	protein histidine kinase activity
BA953_16790	COG2198	Histidine kinase
BA953_16790	COG0784	Response regulator, receiver
BA953_16795	COG1879	ABC-type sugar transport system periplasmic component
BA953_16800	COG1803	Methylglyoxal synthase
BA953_16805	COG2188	Transcriptional regulator
BA953_16815	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BA953_16815	COG1263	PTS System
BA953_16820	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA953_16825	COG0800	Aldolase
BA953_16835	COG0546	phosphoglycolate phosphatase activity
BA953_16850	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA953_16855	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA953_16860	COG0840	transmembrane signaling receptor activity
BA953_16865	COG0583	DNA-binding transcription factor activity
BA953_16870	COG3048	D-serine ammonia-lyase activity
BA953_16880	COG0346	lactoylglutathione lyase activity
BA953_16895	COG1214	PFAM Peptidase M22, glycoprotease
BA953_16895	COG0456	acetyltransferase
BA953_16910	COG3385	transposase activity
BA953_16930	COG0513	Belongs to the DEAD box helicase family
BA953_16940	COG0814	amino acid
BA953_16945	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA953_16945	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BA953_16955	COG0513	Belongs to the DEAD box helicase family
BA953_16970	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BA953_16980	COG2897	thiosulfate sulfurtransferase activity
BA953_17005	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BA953_17010	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BA953_17015	COG1522	sequence-specific DNA binding
BA953_17030	COG2199	diguanylate cyclase activity
BA953_17070	COG0523	cobalamin synthesis protein
BA953_17075	COG0038	chloride channel
BA953_17085	COG0156	8-amino-7-oxononanoate synthase activity
BA953_17090	COG0784	Response regulator, receiver
BA953_17090	COG2205	protein histidine kinase activity
BA953_17095	COG2801	Transposase and inactivated derivatives
BA953_17100	COG0419	ATPase involved in DNA repair
BA953_17110	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BA953_17115	COG3118	belongs to the thioredoxin family
BA953_17220	COG2146	nitrite reductase [NAD(P)H] activity
BA953_17225	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BA953_17225	COG2146	nitrite reductase [NAD(P)H] activity
BA953_17230	COG1116	anion transmembrane transporter activity
BA953_17235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BA953_17240	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BA953_17240	COG1116	anion transmembrane transporter activity
BA953_17250	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BA953_17255	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BA953_17255	COG1648	precorrin-2 dehydrogenase activity
BA953_17260	COG0243	molybdopterin cofactor binding
BA953_17285	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BA953_17315	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BA953_17320	COG2159	amidohydrolase
BA953_17325	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BA953_17330	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BA953_17345	COG0679	Auxin Efflux Carrier
BA953_17350	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA953_17360	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA953_17365	COG0583	DNA-binding transcription factor activity
BA953_17380	COG0667	Aldo Keto reductase
BA953_17390	COG2315	Protein conserved in bacteria
BA953_17400	COG2199	diguanylate cyclase activity
BA953_17400	COG2203	Gaf domain
BA953_17425	COG3706	GGDEF domain
BA953_17445	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
BA953_17450	COG1028	Short-chain dehydrogenase reductase Sdr
BA953_17460	COG1024	Enoyl-CoA hydratase
BA953_17465	COG1024	Enoyl-CoA hydratase
BA953_17480	COG0183	Belongs to the thiolase family
BA953_17490	COG1960	acyl-CoA dehydrogenase activity
BA953_17495	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BA953_17530	COG2259	Doxx family
BA953_17535	COG1741	Belongs to the pirin family
BA953_17540	COG2801	Transposase and inactivated derivatives
BA953_17555	COG1115	amino acid carrier protein
BA953_17560	COG0583	DNA-binding transcription factor activity
BA953_17565	COG2910	NAD(P)H-binding
BA953_17575	COG3706	GGDEF domain
BA953_17575	COG2203	Gaf domain
BA953_17575	COG5001	Diguanylate cyclase
BA953_17575	COG4251	negative regulation of phosphorylation
BA953_17595	COG1858	cytochrome C peroxidase
BA953_17615	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BA953_17625	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BA953_17630	COG3300	MHYT domain
BA953_17630	COG5001	Diguanylate cyclase
BA953_17640	COG0789	Transcriptional regulator
BA953_17650	COG2176	DNA-directed DNA polymerase activity
BA953_17655	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA953_17660	COG1846	Transcriptional regulator
BA953_17665	COG3706	GGDEF domain
BA953_17690	COG2814	Major facilitator Superfamily
BA953_17695	COG3385	transposase activity
BA953_17700	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BA953_17705	COG0714	Associated with various cellular activities
BA953_17710	COG0494	nUDIX hydrolase
BA953_17720	COG1028	Short-chain dehydrogenase reductase Sdr
BA953_17735	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BA953_17740	COG0784	Response regulator, receiver
BA953_17740	COG0835	chemotaxis
BA953_17745	COG3706	GGDEF domain
BA953_17770	COG1760	l-serine dehydratase
BA953_17775	COG0583	DNA-binding transcription factor activity
BA953_17780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA953_17785	COG2866	Carboxypeptidase
BA953_17815	COG3842	ATPase activity
BA953_17825	COG1840	ABC-type Fe3 transport system, periplasmic component
BA953_17830	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BA953_17865	COG1011	Hydrolase
BA953_17875	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BA953_17880	COG1454	alcohol dehydrogenase
BA953_17925	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA953_17930	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BA953_17975	COG3186	Phenylalanine-4-hydroxylase
BA953_17980	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BA953_17985	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA953_18005	COG0784	Response regulator, receiver
BA953_18005	COG2205	protein histidine kinase activity
BA953_18010	COG2205	protein histidine kinase activity
BA953_18010	COG0784	Response regulator, receiver
BA953_18015	COG0612	Peptidase, M16
BA953_18025	COG0798	PFAM Bile acid sodium symporter
BA953_18040	COG2195	Cleaves the N-terminal amino acid of tripeptides
BA953_18050	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BA953_18090	COG1063	alcohol dehydrogenase
BA953_18095	COG0156	8-amino-7-oxononanoate synthase activity
BA953_18100	COG2200	EAL domain
BA953_18100	COG2199	diguanylate cyclase activity
BA953_18100	COG2202	Pas domain
BA953_18120	COG0346	lactoylglutathione lyase activity
BA953_18135	COG2205	protein histidine kinase activity
BA953_18140	COG0745	RESPONSE REGULATOR receiver
BA953_18150	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA953_18175	COG0714	Associated with various cellular activities
BA953_18190	COG2304	oxidoreductase activity
BA953_18195	COG2304	oxidoreductase activity
BA953_18215	COG0110	maltose O-acetyltransferase activity
BA953_18220	COG1765	OsmC-like protein
BA953_18225	COG0673	inositol 2-dehydrogenase activity
BA953_18245	COG0531	amino acid
BA953_18265	COG2205	protein histidine kinase activity
BA953_18270	COG0745	RESPONSE REGULATOR receiver
BA953_18295	COG1566	PFAM secretion protein HlyD family protein
BA953_18300	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BA953_18305	COG0402	S-adenosylhomocysteine deaminase activity
BA953_18310	COG0861	Integral membrane protein TerC family
BA953_18320	COG5002	protein histidine kinase activity
BA953_18320	COG2205	protein histidine kinase activity
BA953_18320	COG0784	Response regulator, receiver
BA953_18365	COG1175	transmembrane transport
BA953_18375	COG3842	ATPase activity
BA953_18380	COG2096	Adenosyltransferase
BA953_18385	COG0748	coenzyme F420 binding
BA953_18390	COG3721	Heme iron utilization protein
BA953_18400	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BA953_18405	COG0811	peptide transport
BA953_18410	COG0848	biopolymer transport protein
BA953_18420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA953_18425	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BA953_18430	COG2814	Major facilitator Superfamily
BA953_18440	COG0739	heme binding
BA953_18455	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BA953_18465	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
BA953_18475	COG0513	Belongs to the DEAD box helicase family
BA953_18485	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA953_18485	COG4191	Histidine kinase
BA953_18490	COG0784	Response regulator, receiver
BA953_18490	COG3437	response regulator, receiver
BA953_18495	COG1609	Transcriptional regulator
BA953_18500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA953_18505	COG1879	ABC-type sugar transport system periplasmic component
BA953_18510	COG1172	Belongs to the binding-protein-dependent transport system permease family
BA953_18515	COG1129	ABC transporter
BA953_18520	COG1869	D-ribose catabolic process
BA953_18530	COG3469	chitinase activity
BA953_18545	COG0004	ammonium transporteR
BA953_18570	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA953_18590	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA953_18595	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BA953_18640	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BA953_18680	COG1609	Transcriptional regulator
BA953_18685	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BA953_18690	COG3265	gluconokinase activity
BA953_18695	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA953_18705	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BA953_18730	COG0583	DNA-binding transcription factor activity
BA953_18750	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BA953_18760	COG0668	transmembrane transport
BA953_18780	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BA953_18820	COG3118	belongs to the thioredoxin family
BA953_18825	COG4232	protein-disulfide reductase activity
BA953_18840	COG1280	lysine exporter protein (LysE YggA)
BA953_18870	COG0443	Heat shock 70 kDa protein
BA953_18875	COG0583	DNA-binding transcription factor activity
BA953_18885	COG4948	Mandelate Racemase Muconate Lactonizing
BA953_18890	COG1396	sequence-specific DNA binding
BA953_18895	COG5001	Diguanylate cyclase
BA953_18905	COG3706	GGDEF domain
BA953_18915	COG0642	Histidine kinase
BA953_18920	COG0745	RESPONSE REGULATOR receiver
BA953_18935	COG2130	NADP-dependent
BA953_18950	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BA953_18990	COG0366	Alpha amylase catalytic
BA953_19025	COG3279	Response regulator of the LytR AlgR family
BA953_19030	COG3275	phosphorelay sensor kinase activity
BA953_19045	COG4591	ABC-type transport system involved in lipoprotein release permease component
BA953_19050	COG1136	(ABC) transporter
BA953_19065	COG1012	belongs to the aldehyde dehydrogenase family
BA953_19070	COG0584	glycerophosphoryl diester phosphodiesterase
BA953_19080	COG3530	Putative quorum-sensing-regulated virulence factor
BA953_19095	COG1686	Belongs to the peptidase S11 family
BA953_19115	COG3036	rescue of stalled ribosome
BA953_19120	COG1278	Cold shock
BA953_19135	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA953_19135	COG1017	nitric oxide dioxygenase activity
BA953_19140	COG3604	Transcriptional regulator
BA953_19155	COG2249	NAD(P)H dehydrogenase (quinone) activity
BA953_19165	COG0534	Mate efflux family protein
BA953_19175	COG0697	spore germination
BA953_19190	COG2814	Major facilitator Superfamily
BA953_19195	COG0583	DNA-binding transcription factor activity
BA953_19200	COG5001	Diguanylate cyclase
BA953_19250	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
BA953_19260	COG0438	transferase activity, transferring glycosyl groups
BA953_19270	COG1045	serine acetyltransferase
BA953_19290	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BA953_19295	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BA953_19300	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BA953_19305	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BA953_19315	COG5001	Diguanylate cyclase
BA953_19315	COG4251	negative regulation of phosphorylation
BA953_19315	COG3706	GGDEF domain
BA953_19315	COG2203	Gaf domain
BA953_19320	COG4989	oxidoreductase activity
BA953_19330	COG0366	Alpha amylase catalytic
BA953_19340	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BA953_19345	COG1126	abc transporter atp-binding protein
BA953_19350	COG0765	amino acid transport
BA953_19355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA953_19360	COG0765	amino acid transport
BA953_19365	COG0109	protoheme IX farnesyltransferase activity
BA953_19395	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BA953_19400	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BA953_19405	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BA953_19415	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BA953_19455	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA953_19480	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA953_19495	COG1741	Belongs to the pirin family
BA953_19505	COG2814	Major facilitator Superfamily
BA953_19510	COG1686	Belongs to the peptidase S11 family
BA953_19520	COG0583	DNA-binding transcription factor activity
BA953_19555	COG1253	flavin adenine dinucleotide binding
BA953_19580	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BA953_19595	COG1280	lysine exporter protein (LysE YggA)
BA953_19600	COG0583	DNA-binding transcription factor activity
BA953_19655	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BA953_19665	COG0523	cobalamin synthesis protein
BA953_19670	COG2988	succinylglutamate desuccinylase activity
BA953_19715	COG1846	Transcriptional regulator
BA953_19725	COG1280	lysine exporter protein (LysE YggA)
BA953_19740	COG1176	ABC-type spermidine putrescine transport system, permease component I
BA953_19745	COG3842	ATPase activity
BA953_19750	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA953_19755	COG2423	ornithine cyclodeaminase activity
BA953_19770	COG3938	Belongs to the proline racemase family
BA953_19780	COG2186	Transcriptional regulator
BA953_19795	COG0601	transmembrane transport
BA953_19800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BA953_19815	COG0006	proline dipeptidase activity
BA953_19825	COG2801	Transposase and inactivated derivatives
BA953_19845	COG4934	collagen metabolic process
BA953_19855	COG3568	Endonuclease Exonuclease Phosphatase
BA953_19860	COG3291	Pkd domain containing protein
BA953_19865	COG0513	Belongs to the DEAD box helicase family
BA953_19875	COG1388	LysM domain
BA953_19875	COG1376	ErfK ybiS ycfS ynhG family protein
BA953_19880	COG0415	Belongs to the DNA photolyase family
BA953_19885	COG0789	Transcriptional regulator
BA953_19890	COG3272	Protein of unknown function (DUF1722)
BA953_19895	COG0813	purine-nucleoside phosphorylase activity
BA953_19910	COG3706	GGDEF domain
BA953_19925	COG1566	PFAM secretion protein HlyD family protein
BA953_19930	COG0786	glutamate:sodium symporter activity
BA953_19940	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BA953_19955	COG0583	DNA-binding transcription factor activity
BA953_19965	COG1132	(ABC) transporter
BA953_20010	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BA953_20055	COG3033	Beta-eliminating lyase
BA953_20060	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BA953_20065	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BA953_20070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BA953_20080	COG1999	signal sequence binding
BA953_20095	COG1671	Belongs to the UPF0178 family
BA953_20100	COG0393	Putative heavy-metal-binding
BA953_20105	COG0583	DNA-binding transcription factor activity
BA953_20110	COG2814	Major facilitator Superfamily
BA953_20130	COG0584	glycerophosphoryl diester phosphodiesterase
BA953_20135	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA953_20145	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA953_20175	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BA953_20325	COG1301	dicarboxylic acid transport
BA953_20330	COG1404	Belongs to the peptidase S8 family
BA953_20340	COG2200	EAL domain
BA953_20345	COG1404	Belongs to the peptidase S8 family
BA953_20355	COG2207	Transcriptional regulator
BA953_20380	COG5492	domain, Protein
BA953_20380	COG4932	domain protein
BA953_20385	COG5002	protein histidine kinase activity
BA953_20385	COG5001	Diguanylate cyclase
BA953_20390	COG3070	regulator of competence-specific genes
BA953_20395	COG0700	Nucleoside recognition
BA953_20400	COG3366	ferrous iron transmembrane transporter activity
BA953_20405	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BA953_20420	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BA953_20435	COG2198	Histidine kinase
BA953_20435	COG5002	protein histidine kinase activity
BA953_20435	COG0784	Response regulator, receiver
BA953_20440	COG0745	RESPONSE REGULATOR receiver
BA953_20445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_20450	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA953_20455	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BA953_20480	COG0745	RESPONSE REGULATOR receiver
BA953_20485	COG2205	protein histidine kinase activity
BA953_20490	COG0471	metal ion transport
BA953_20530	COG1595	DNA-templated transcription, initiation
BA953_20550	COG0251	oxidation-reduction process
BA953_20560	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA953_20560	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BA953_20565	COG1063	alcohol dehydrogenase
BA953_20585	COG0583	DNA-binding transcription factor activity
BA953_20615	COG1175	transmembrane transport
BA953_20630	COG1940	carbohydrate kinase activity
BA953_20640	COG0438	transferase activity, transferring glycosyl groups
BA953_20670	COG0671	phosphoesterase, PA-phosphatase related
BA953_20680	COG3708	Transcriptional regulator
BA953_20680	COG2207	Transcriptional regulator
BA953_20695	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BA953_20700	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BA953_20705	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BA953_20710	COG1116	anion transmembrane transporter activity
BA953_20715	COG0351	phosphomethylpyrimidine kinase
BA953_20720	COG0656	L-ascorbic acid biosynthetic process
BA953_20740	COG0583	DNA-binding transcription factor activity
BA953_20760	COG0768	penicillin binding
BA953_20775	COG2723	6-phospho-beta-galactosidase activity
BA953_20785	COG0589	response to stress
BA953_20790	COG3842	ATPase activity
BA953_20795	COG0546	phosphoglycolate phosphatase activity
BA953_20815	COG1175	transmembrane transport
BA953_20820	COG0583	DNA-binding transcription factor activity
BA953_20890	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BA953_20910	COG3706	GGDEF domain
BA953_20910	COG0745	RESPONSE REGULATOR receiver
BA953_20935	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BA953_20940	COG0840	transmembrane signaling receptor activity
BA953_20945	COG0835	chemotaxis
BA953_20960	COG0745	RESPONSE REGULATOR receiver
BA953_20970	COG0840	transmembrane signaling receptor activity
BA953_20975	COG1444	tRNA N-acetyltransferase activity
BA953_21005	COG4608	Belongs to the ABC transporter superfamily
BA953_21010	COG0444	Belongs to the ABC transporter superfamily
BA953_21045	COG1028	Short-chain dehydrogenase reductase Sdr
BA953_21060	COG1733	regulation of RNA biosynthetic process
BA953_21080	COG0583	DNA-binding transcription factor activity
BA953_21085	COG1051	belongs to the nudix hydrolase family
BA953_21105	COG0697	spore germination
BA953_21110	COG1846	Transcriptional regulator
BA953_21140	COG1288	antiporter activity
BA953_21145	COG0583	DNA-binding transcription factor activity
BA953_21155	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BA953_21160	COG3960	tartronate-semialdehyde synthase activity
BA953_21165	COG3622	Belongs to the hyi family
BA953_21170	COG2084	Dehydrogenase
BA953_21215	COG0559	Belongs to the binding-protein-dependent transport system permease family
BA953_21240	COG0831	urea catabolic process
BA953_21245	COG0832	Belongs to the urease beta subunit family
BA953_21250	COG0804	urea catabolic process
BA953_21255	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
BA953_21300	COG0840	transmembrane signaling receptor activity
BA953_21305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA953_21320	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BA953_21330	COG4145	pantothenate transmembrane transporter activity
BA953_21335	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BA953_21340	COG0800	Aldolase
BA953_21350	COG2706	6-phosphogluconolactonase activity
BA953_21360	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BA953_21365	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BA953_21370	COG1845	cytochrome c oxidase, subunit III
BA953_21375	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BA953_21380	COG0109	protoheme IX farnesyltransferase activity
BA953_21430	COG0583	DNA-binding transcription factor activity
BA953_21465	COG3214	Protein conserved in bacteria
BA953_21470	COG0596	Alpha beta hydrolase
BA953_21485	COG2252	PERMEase
BA953_21505	COG4266	Belongs to the allantoicase family
BA953_21520	COG0840	transmembrane signaling receptor activity
BA953_21530	COG1522	sequence-specific DNA binding
BA953_21540	COG2205	protein histidine kinase activity
BA953_21540	COG0784	Response regulator, receiver
BA953_21540	COG5002	protein histidine kinase activity
BA953_21545	COG2226	methyltransferase
BA953_21550	COG0402	S-adenosylhomocysteine deaminase activity
BA953_21560	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BA953_21570	COG2186	Transcriptional regulator
BA953_21600	COG1278	Cold shock
BA953_21605	COG3795	YCII-related domain
BA953_21630	COG0402	S-adenosylhomocysteine deaminase activity
BA953_21635	COG1404	Belongs to the peptidase S8 family
BA953_21640	COG1335	isochorismatase
BA953_21690	COG2909	trisaccharide binding
BA953_21695	COG0058	SHG alpha-glucan phosphorylase activity
BA953_21700	COG1640	4-alpha-glucanotransferase
BA953_21705	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BA953_21715	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BA953_21720	COG1619	proteins homologs of microcin C7 resistance protein MccF
BA953_21775	COG0300	oxidoreductase activity
BA953_21830	COG0561	phosphatase activity
BA953_21840	COG0024	Methionine aminopeptidase
BA953_21870	COG1733	regulation of RNA biosynthetic process
BA953_21930	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_21935	COG0383	alpha-mannosidase activity
BA953_21945	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_21945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_21945	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BA953_21960	COG2814	Major facilitator Superfamily
BA953_21965	COG1120	ATPase activity
BA953_21980	COG4264	IucA IucC family
BA953_22005	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BA953_22015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BA953_22025	COG0662	Cupin 2, conserved barrel domain protein
BA953_22030	COG1960	acyl-CoA dehydrogenase activity
BA953_22035	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BA953_22040	COG2076	Multidrug Resistance protein
BA953_22045	COG2076	Multidrug Resistance protein
BA953_22050	COG0590	tRNA wobble adenosine to inosine editing
BA953_22075	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BA953_22105	COG3448	diguanylate cyclase activity
BA953_22105	COG4175	Glycine betaine
BA953_22110	COG4176	ABC-type proline glycine betaine transport system permease component
BA953_22130	COG2095	MarC family integral membrane protein
BA953_22140	COG0534	Mate efflux family protein
BA953_22150	COG0583	DNA-binding transcription factor activity
BA953_22175	COG4964	Belongs to the GSP D family
BA953_22185	COG2894	cell division
BA953_22240	COG1477	protein flavinylation
BA953_22260	COG4221	oxidoreductase activity
BA953_22270	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BA953_22275	COG0573	inorganic phosphate transmembrane transporter activity
BA953_22280	COG0581	inorganic phosphate transmembrane transporter activity
BA953_22300	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BA953_22305	COG1162	GTPase activity
BA953_22325	COG1122	ATPase activity
BA953_22330	COG4720	Psort location CytoplasmicMembrane, score
BA953_22350	COG0454	-acetyltransferase
BA953_22355	COG0840	transmembrane signaling receptor activity
BA953_22385	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BA953_22390	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BA953_22395	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
BA953_22405	COG1522	sequence-specific DNA binding
BA953_22435	COG3608	succinylglutamate desuccinylase aspartoacylase
BA953_22440	COG1288	antiporter activity
BA953_22455	COG0745	RESPONSE REGULATOR receiver
BA953_22490	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BA953_22510	COG0583	DNA-binding transcription factor activity
BA953_22515	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BA953_22520	COG1151	hydroxylamine reductase activity
BA953_22530	COG3706	GGDEF domain
BA953_22535	COG0583	DNA-binding transcription factor activity
BA953_22550	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BA953_22555	COG3604	Transcriptional regulator
BA953_22580	COG0415	Belongs to the DNA photolyase family
BA953_22585	COG3046	protein related to deoxyribodipyrimidine photolyase
BA953_22595	COG2329	Antibiotic biosynthesis monooxygenase
BA953_22600	COG3304	Inner membrane component domain
BA953_22610	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA953_22620	COG0583	DNA-binding transcription factor activity
BA953_22625	COG1234	tRNA 3'-trailer cleavage
BA953_22655	COG0004	ammonium transporteR
BA953_22660	COG3437	response regulator, receiver
BA953_22665	COG3383	formate dehydrogenase (NAD+) activity
BA953_22675	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BA953_22680	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BA953_22705	COG0739	heme binding
BA953_22710	COG3047	cAMP biosynthetic process
BA953_22750	COG3457	Alanine racemase
BA953_22765	COG0300	oxidoreductase activity
BA953_22770	COG5553	Cysteine dioxygenase type I
BA953_22785	COG0673	inositol 2-dehydrogenase activity
BA953_22790	COG0488	(ABC) transporter
BA953_22820	COG4191	Histidine kinase
BA953_22820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BA953_22845	COG1132	(ABC) transporter
BA953_22875	COG1690	Belongs to the RtcB family
BA953_22880	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BA953_22885	COG2801	Transposase and inactivated derivatives
BA953_22890	COG2801	Transposase and inactivated derivatives
BA953_22895	COG2963	transposase activity
BA953_22915	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BA953_22925	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BA953_22940	COG4580	involved in the transport of maltose and maltodextrins
BA953_22950	COG0840	transmembrane signaling receptor activity
BA953_22955	COG0840	transmembrane signaling receptor activity
BA953_22960	COG0583	DNA-binding transcription factor activity
BA953_22985	COG0840	transmembrane signaling receptor activity
BA953_23020	COG0697	spore germination
BA953_23050	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BA953_23050	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BA953_23060	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BA953_23060	COG2207	Transcriptional regulator
BA953_23065	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA953_23085	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BA953_23095	COG1522	sequence-specific DNA binding
BA953_23125	COG1294	oxidase, subunit
BA953_23130	COG1271	oxidase subunit
BA953_23135	COG1805	sodium ion transport
BA953_23155	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BA953_23190	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BA953_23240	COG1309	transcriptional regulator
BA953_23260	COG0745	RESPONSE REGULATOR receiver
BA953_23265	COG5002	protein histidine kinase activity
BA953_23305	COG0842	Transport permease protein
BA953_23310	COG1131	(ABC) transporter
BA953_23355	COG0110	maltose O-acetyltransferase activity
BA953_23360	COG0346	lactoylglutathione lyase activity
BA953_23365	COG0625	glutathione transferase activity
BA953_23370	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BA953_23375	COG1940	carbohydrate kinase activity
BA953_23390	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA953_23395	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA953_23400	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BA953_23415	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BA953_23425	COG0366	Alpha amylase catalytic
BA953_23445	COG2084	Dehydrogenase
BA953_23460	COG2130	NADP-dependent
BA953_23465	COG1309	transcriptional regulator
BA953_23470	COG3706	GGDEF domain
BA953_23490	COG0513	Belongs to the DEAD box helicase family
BA953_23495	COG1414	Transcriptional regulator
BA953_23500	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BA953_23505	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BA953_23515	COG4948	Mandelate Racemase Muconate Lactonizing
BA953_23520	COG3734	2-keto-3-deoxy-galactonokinase
BA953_23525	COG0800	Aldolase
BA953_23535	COG1609	Transcriptional regulator
BA953_23540	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BA953_23555	COG5002	protein histidine kinase activity
BA953_23555	COG3447	MASE1 domain protein
BA953_23555	COG5001	Diguanylate cyclase
BA953_23560	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BA953_23590	COG2204	response regulator
BA953_23605	COG0573	inorganic phosphate transmembrane transporter activity
BA953_23615	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BA953_23620	COG0110	maltose O-acetyltransferase activity
BA953_23645	COG0251	oxidation-reduction process
BA953_23670	COG2801	Transposase and inactivated derivatives
BA953_23690	COG2801	Transposase and inactivated derivatives
BA953_23700	COG0564	pseudouridine synthase activity
BA953_23730	COG0583	DNA-binding transcription factor activity
BA953_23735	COG2814	Major facilitator Superfamily
BA953_23760	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BA953_23770	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BA953_23780	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BA953_23820	COG1012	belongs to the aldehyde dehydrogenase family
BA953_23825	COG3284	Transcriptional regulator
BA953_23845	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BA953_23850	COG0363	glucosamine-6-phosphate deaminase activity
BA953_23855	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BA953_23860	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BA953_23880	COG2271	Major facilitator Superfamily
BA953_23885	COG3851	Histidine kinase
BA953_23890	COG2197	response regulator
BA953_23915	COG3217	Mosc domain protein beta barrel domain protein
BA953_23915	COG3217	Mosc domain protein beta barrel domain protein
BA953_23915	COG0633	Ferredoxin
BA953_23915	COG0633	Ferredoxin
BA953_23925	COG1349	DNA-binding transcription factor activity
BA953_23950	COG2354	Protein conserved in bacteria
BA953_23960	COG0366	Alpha amylase catalytic
BA953_23995	COG0840	transmembrane signaling receptor activity
BA953_24000	COG1366	Belongs to the anti-sigma-factor antagonist family
BA953_24010	COG2172	sigma factor antagonist activity
BA953_24020	COG3437	response regulator, receiver
BA953_24020	COG3850	Histidine kinase
BA953_24020	COG4999	Histidine kinase
BA953_24020	COG2205	protein histidine kinase activity
BA953_24025	COG3437	response regulator, receiver
BA953_24040	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BA953_24040	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BA953_24045	COG0516	GMP reductase activity
BA953_24095	COG1404	Belongs to the peptidase S8 family
BA953_24110	COG1309	transcriptional regulator
BA953_24135	COG3448	diguanylate cyclase activity
BA953_24135	COG4175	Glycine betaine
BA953_24155	COG1304	FMN binding
BA953_24160	COG1620	l-lactate permease
BA953_24165	COG0583	DNA-binding transcription factor activity
BA953_24170	COG4172	Belongs to the ABC transporter superfamily
BA953_24180	COG1067	ATP-dependent peptidase activity
BA953_24185	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BA953_24190	COG0840	transmembrane signaling receptor activity
BA953_24205	COG4166	transmembrane transport
BA953_24210	COG4174	ABC transporter (Permease)
BA953_24215	COG4239	(ABC) transporter, permease
BA953_24220	COG4172	Belongs to the ABC transporter superfamily
BA953_24230	COG3706	GGDEF domain
BA953_24230	COG0745	RESPONSE REGULATOR receiver
BA953_24270	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BA953_24275	COG4605	iron ion homeostasis
BA953_24280	COG4604	ABC transporter, ATP-binding protein
BA953_24285	COG2759	Belongs to the formate--tetrahydrofolate ligase family
BA953_24310	COG2271	Major facilitator Superfamily
BA953_24320	COG0840	transmembrane signaling receptor activity
BA953_24325	COG2199	diguanylate cyclase activity
BA953_24325	COG2203	Gaf domain
BA953_24335	COG0739	heme binding
BA953_24375	COG3501	Rhs element vgr protein
BA953_24400	COG0515	serine threonine protein kinase
BA953_24400	COG2815	serine threonine protein kinase
BA953_24435	COG1522	sequence-specific DNA binding
BA953_24475	COG3250	beta-galactosidase activity
BA953_24480	COG2211	Major facilitator Superfamily
BA953_24485	COG1609	Transcriptional regulator
BA953_24490	COG1309	transcriptional regulator
BA953_24495	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_24500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BA953_24515	COG0183	Belongs to the thiolase family
BA953_24530	COG1794	racemase activity, acting on amino acids and derivatives
BA953_24535	COG2814	Major facilitator Superfamily
BA953_24540	COG3240	lipase activity
BA953_24545	COG4412	M6 family metalloprotease domain protein
BA953_24545	COG3291	Pkd domain containing protein
BA953_24590	COG1328	CTP reductase activity
BA953_24595	COG0602	queuosine metabolic process
BA953_24605	COG0189	ligase activity
BA953_24605	COG4067	protein conserved in archaea
BA953_24615	COG0545	Peptidyl-prolyl cis-trans isomerase
BA953_24635	COG0247	lactate metabolic process
BA953_24640	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
BA953_24645	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BA953_24650	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BA953_24655	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BA953_24680	COG2827	Endonuclease containing a URI domain
BA953_24695	COG5002	protein histidine kinase activity
BA953_24695	COG0784	Response regulator, receiver
BA953_24730	COG0330	HflC and HflK could
BA953_24770	COG3344	reverse transcriptase
BA953_24800	COG1192	Involved in chromosome partitioning
BA953_24810	COG2814	Major facilitator Superfamily
BA953_24825	COG3033	Beta-eliminating lyase
BA953_24840	COG2801	Transposase and inactivated derivatives
BA953_24845	COG2801	Transposase and inactivated derivatives
BA953_24850	COG2963	transposase activity
BA953_24870	COG0305	Participates in initiation and elongation during chromosome replication
BA953_24885	COG3547	Transposase (IS116 IS110 IS902 family)
BA953_24900	COG0069	glutamate synthase activity