BA953_00005 SM00434 DNA Topoisomerase IV BA953_00010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_00010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_00040 SM00342 helix_turn_helix, arabinose operon control protein BA953_00065 SM00849 Metallo-beta-lactamase superfamily BA953_00070 SM00448 cheY-homologous receiver domain BA953_00070 SM00862 Transcriptional regulatory protein, C terminal BA953_00075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_00075 SM00387 Histidine kinase-like ATPases BA953_00075 SM00388 His Kinase A (phosphoacceptor) domain BA953_00120 SM00091 PAS domain BA953_00120 SM00387 Histidine kinase-like ATPases BA953_00125 SM00448 cheY-homologous receiver domain BA953_00130 SM00062 Bacterial periplasmic substrate-binding proteins BA953_00145 SM00267 diguanylate cyclase BA953_00150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_00215 SM00448 cheY-homologous receiver domain BA953_00215 SM00862 Transcriptional regulatory protein, C terminal BA953_00220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_00220 SM00387 Histidine kinase-like ATPases BA953_00220 SM00388 His Kinase A (phosphoacceptor) domain BA953_00235 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_00235 SM00895 BA953_00235 BA953_00280 SM00382 ATPases associated with a variety of cellular activities BA953_00295 SM00382 ATPases associated with a variety of cellular activities BA953_00300 SM00923 MbtH-like protein BA953_00305 SM00823 Phosphopantetheine attachment site BA953_00305 SM01294 BA953_00305 BA953_00310 SM00823 Phosphopantetheine attachment site BA953_00310 SM00824 Thioesterase BA953_00320 SM01006 Siderophore biosynthesis protein domain BA953_00405 SM00382 ATPases associated with a variety of cellular activities BA953_00405 SM00448 cheY-homologous receiver domain BA953_00410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_00410 SM00387 Histidine kinase-like ATPases BA953_00410 SM00388 His Kinase A (phosphoacceptor) domain BA953_00410 SM00448 cheY-homologous receiver domain BA953_00480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_00490 SM01144 BA953_00490 BA953_00510 SM00852 Probable molybdopterin binding domain BA953_00520 SM00382 ATPases associated with a variety of cellular activities BA953_00535 SM00382 ATPases associated with a variety of cellular activities BA953_00535 SM00448 cheY-homologous receiver domain BA953_00540 SM00387 Histidine kinase-like ATPases BA953_00540 SM00388 His Kinase A (phosphoacceptor) domain BA953_00565 SM00382 ATPases associated with a variety of cellular activities BA953_00600 SM00862 Transcriptional regulatory protein, C terminal BA953_00640 SM00867 YceI-like domain BA953_00665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_00665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_00700 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BA953_00730 SM00267 diguanylate cyclase BA953_00755 SM00382 ATPases associated with a variety of cellular activities BA953_00880 SM00100 Cyclic nucleotide-monophosphate binding domain BA953_00880 SM00419 helix_turn_helix, cAMP Regulatory protein BA953_00935 SM00458 Ricin-type beta-trefoil BA953_00960 SM00421 helix_turn_helix, Lux Regulon BA953_00960 SM00448 cheY-homologous receiver domain BA953_00970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_00970 SM00387 Histidine kinase-like ATPases BA953_00970 SM00388 His Kinase A (phosphoacceptor) domain BA953_00970 SM00448 cheY-homologous receiver domain BA953_01015 SM00382 ATPases associated with a variety of cellular activities BA953_01020 SM00382 ATPases associated with a variety of cellular activities BA953_01070 SM00382 ATPases associated with a variety of cellular activities BA953_01095 SM00849 Metallo-beta-lactamase superfamily BA953_01130 SM00245 tail specific protease BA953_01140 SM00530 Helix-turn-helix XRE-family like proteins BA953_01155 SM00342 helix_turn_helix, arabinose operon control protein BA953_01215 SM00382 ATPases associated with a variety of cellular activities BA953_01250 SM00458 Ricin-type beta-trefoil BA953_01275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_01275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_01280 SM01005 Alanine racemase, C-terminal domain BA953_01435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_01455 SM00422 helix_turn_helix, mercury resistance BA953_01535 SM00382 ATPases associated with a variety of cellular activities BA953_01545 SM00981 BA953_01545 BA953_01580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA953_01580 SM00245 tail specific protease BA953_01585 SM00945 ProQ/FINO family BA953_01595 SM00382 ATPases associated with a variety of cellular activities BA953_01615 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_01650 SM00062 Bacterial periplasmic substrate-binding proteins BA953_01665 SM00382 ATPases associated with a variety of cellular activities BA953_01685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_01690 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BA953_01765 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_01765 SM00895 BA953_01765 BA953_01830 SM00382 ATPases associated with a variety of cellular activities BA953_01830 SM01086 C-terminal, D2-small domain, of ClpB protein BA953_01875 SM00220 Serine/Threonine protein kinases, catalytic domain BA953_01920 SM00052 Putative diguanylate phosphodiesterase BA953_01945 SM00028 Tetratricopeptide repeats BA953_01970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BA953_01970 SM00091 PAS domain BA953_01970 SM00387 Histidine kinase-like ATPases BA953_01970 SM00388 His Kinase A (phosphoacceptor) domain BA953_01970 SM00448 cheY-homologous receiver domain BA953_01980 SM00382 ATPases associated with a variety of cellular activities BA953_02000 SM00267 diguanylate cyclase BA953_02015 SM00382 ATPases associated with a variety of cellular activities BA953_02035 SM00855 Phosphoglycerate mutase family BA953_02055 SM00903 Flavin reductase like domain BA953_02070 SM00479 BA953_02070 BA953_02090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_02110 SM01022 BA953_02110 BA953_02125 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_02125 SM00866 BA953_02125 BA953_02180 SM00671 Sel1-like repeats. BA953_02480 SM00028 Tetratricopeptide repeats BA953_02590 SM00028 Tetratricopeptide repeats BA953_02620 SM00507 HNH nucleases BA953_02655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_02655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_02665 SM00421 helix_turn_helix, Lux Regulon BA953_02665 SM00448 cheY-homologous receiver domain BA953_02670 SM00387 Histidine kinase-like ATPases BA953_02670 SM01049 BA953_02670 BA953_02700 SM00849 Metallo-beta-lactamase superfamily BA953_02745 SM01034 Sensors of blue-light using FAD BA953_02765 SM00091 PAS domain BA953_02765 SM00382 ATPases associated with a variety of cellular activities BA953_02795 SM00387 Histidine kinase-like ATPases BA953_02795 SM00388 His Kinase A (phosphoacceptor) domain BA953_02795 SM00448 cheY-homologous receiver domain BA953_02820 SM00052 Putative diguanylate phosphodiesterase BA953_02835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_02835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_02850 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_02860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_02880 SM00487 DEAD-like helicases superfamily BA953_02880 SM00490 helicase superfamily c-terminal domain BA953_02885 SM00919 Malic enzyme, NAD binding domain BA953_02885 SM01274 BA953_02885 BA953_02940 SM00382 ATPases associated with a variety of cellular activities BA953_02945 SM00382 ATPases associated with a variety of cellular activities BA953_02965 SM00363 S4 RNA-binding domain BA953_02970 SM00052 Putative diguanylate phosphodiesterase BA953_02970 SM00267 diguanylate cyclase BA953_02970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_02985 SM00481 DNA polymerase alpha chain like domain BA953_03075 SM00479 BA953_03075 BA953_03120 SM00342 helix_turn_helix, arabinose operon control protein BA953_03145 SM00191 Integrin alpha (beta-propellor repeats). BA953_03155 SM00342 helix_turn_helix, arabinose operon control protein BA953_03165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_03190 SM00191 Integrin alpha (beta-propellor repeats). BA953_03195 SM00342 helix_turn_helix, arabinose operon control protein BA953_03195 SM00871 Bacterial transcription activator, effector binding domain BA953_03240 SM00347 helix_turn_helix multiple antibiotic resistance protein BA953_03270 SM00052 Putative diguanylate phosphodiesterase BA953_03270 SM00091 PAS domain BA953_03275 SM00052 Putative diguanylate phosphodiesterase BA953_03275 SM00091 PAS domain BA953_03280 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_03285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_03285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_03300 SM00387 Histidine kinase-like ATPases BA953_03305 SM00448 cheY-homologous receiver domain BA953_03370 SM00062 Bacterial periplasmic substrate-binding proteins BA953_03370 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BA953_03375 SM00382 ATPases associated with a variety of cellular activities BA953_03395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_03420 SM00763 PrkA AAA domain BA953_03450 SM00382 ATPases associated with a variety of cellular activities BA953_03455 SM00849 Metallo-beta-lactamase superfamily BA953_03470 SM00382 ATPases associated with a variety of cellular activities BA953_03485 SM00487 DEAD-like helicases superfamily BA953_03485 SM00490 helicase superfamily c-terminal domain BA953_03485 SM00982 BA953_03485 BA953_03485 SM01058 CarD-like/TRCF domain BA953_03540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_03540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_03550 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_03565 SM00843 BA953_03565 BA953_03570 SM00344 helix_turn_helix ASNC type BA953_03575 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BA953_03575 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BA953_03595 SM00267 diguanylate cyclase BA953_03605 SM00382 ATPases associated with a variety of cellular activities BA953_03610 SM00382 ATPases associated with a variety of cellular activities BA953_03640 SM00028 Tetratricopeptide repeats BA953_03640 SM00267 diguanylate cyclase BA953_03655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_03655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_03670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_03670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_03675 SM00495 Chitin-binding domain type 3 BA953_03680 SM00244 prohibitin homologues BA953_03700 SM00382 ATPases associated with a variety of cellular activities BA953_03735 SM00458 Ricin-type beta-trefoil BA953_03775 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA953_03780 SM01049 BA953_03780 BA953_03845 SM00346 helix_turn_helix isocitrate lyase regulation BA953_03890 SM00062 Bacterial periplasmic substrate-binding proteins BA953_03890 SM00267 diguanylate cyclase BA953_03925 SM00344 helix_turn_helix ASNC type BA953_03940 SM00978 BA953_03940 BA953_03950 SM00563 Phosphate acyltransferases BA953_03965 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BA953_03995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_04000 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA953_04000 SM00495 Chitin-binding domain type 3 BA953_04000 SM00636 BA953_04000 BA953_04005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_04015 SM01144 BA953_04015 BA953_04025 SM00487 DEAD-like helicases superfamily BA953_04025 SM00490 helicase superfamily c-terminal domain BA953_04050 SM00481 DNA polymerase alpha chain like domain BA953_04055 SM00260 Two component signalling adaptor domain BA953_04055 SM00448 cheY-homologous receiver domain BA953_04120 SM00825 Beta-ketoacyl synthase BA953_04130 SM00822 BA953_04130 BA953_04135 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BA953_04165 SM00363 S4 RNA-binding domain BA953_04170 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_04180 SM00474 3'-5' exonuclease BA953_04210 SM00487 DEAD-like helicases superfamily BA953_04210 SM00491 BA953_04210 BA953_04235 SM00870 BA953_04235 BA953_04250 SM00382 ATPases associated with a variety of cellular activities BA953_04275 SM00267 diguanylate cyclase BA953_04280 SM00382 ATPases associated with a variety of cellular activities BA953_04320 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BA953_04325 SM00028 Tetratricopeptide repeats BA953_04335 SM00411 bacterial (prokaryotic) histone like domain BA953_04340 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_04360 SM00411 bacterial (prokaryotic) histone like domain BA953_04365 SM00382 ATPases associated with a variety of cellular activities BA953_04365 SM00464 Found in ATP-dependent protease La (LON) BA953_04370 SM00382 ATPases associated with a variety of cellular activities BA953_04370 SM00994 ClpX C4-type zinc finger BA953_04370 SM01086 C-terminal, D2-small domain, of ClpB protein BA953_04385 SM00387 Histidine kinase-like ATPases BA953_04385 SM00388 His Kinase A (phosphoacceptor) domain BA953_04390 SM00382 ATPases associated with a variety of cellular activities BA953_04390 SM00448 cheY-homologous receiver domain BA953_04415 SM00382 ATPases associated with a variety of cellular activities BA953_04435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_04435 SM00387 Histidine kinase-like ATPases BA953_04440 SM00448 cheY-homologous receiver domain BA953_04440 SM00862 Transcriptional regulatory protein, C terminal BA953_04465 SM00493 BA953_04465 BA953_04475 SM00382 ATPases associated with a variety of cellular activities BA953_04490 SM00448 cheY-homologous receiver domain BA953_04580 SM00382 ATPases associated with a variety of cellular activities BA953_04590 SM00260 Two component signalling adaptor domain BA953_04595 SM00260 Two component signalling adaptor domain BA953_04605 SM00448 cheY-homologous receiver domain BA953_04610 SM00073 Histidine Phosphotransfer domain BA953_04610 SM00260 Two component signalling adaptor domain BA953_04610 SM00387 Histidine kinase-like ATPases BA953_04610 SM01231 BA953_04610 BA953_04620 SM00448 cheY-homologous receiver domain BA953_04635 SM00382 ATPases associated with a variety of cellular activities BA953_04635 SM00962 SRP54-type protein, GTPase domain BA953_04645 SM00855 Phosphoglycerate mutase family BA953_04660 SM00836 DALR anticodon binding domain BA953_04660 SM01016 Arginyl tRNA synthetase N terminal dom BA953_04680 SM00899 BA953_04680 BA953_04685 SM00342 helix_turn_helix, arabinose operon control protein BA953_04695 SM00382 ATPases associated with a variety of cellular activities BA953_04740 SM00859 Semialdehyde dehydrogenase, NAD binding domain BA953_04750 SM00825 Beta-ketoacyl synthase BA953_04805 SM00463 Small MutS-related domain BA953_04860 SM00382 ATPases associated with a variety of cellular activities BA953_04885 SM00382 ATPases associated with a variety of cellular activities BA953_04885 SM00448 cheY-homologous receiver domain BA953_04890 SM00091 PAS domain BA953_04890 SM00387 Histidine kinase-like ATPases BA953_04890 SM00388 His Kinase A (phosphoacceptor) domain BA953_04895 SM00382 ATPases associated with a variety of cellular activities BA953_04980 SM00028 Tetratricopeptide repeats BA953_05035 SM00028 Tetratricopeptide repeats BA953_05040 SM00267 diguanylate cyclase BA953_05050 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BA953_05050 SM00475 5'-3' exonuclease BA953_05055 SM00477 DNA/RNA non-specific endonuclease BA953_05055 SM00892 DNA/RNA non-specific endonuclease BA953_05080 SM00981 BA953_05080 BA953_05105 SM00861 Transketolase, pyrimidine binding domain BA953_05135 SM00881 CoA binding domain BA953_05150 SM00861 Transketolase, pyrimidine binding domain BA953_05270 SM01081 Putative carbohydrate binding domain BA953_05290 SM00463 Small MutS-related domain BA953_05295 SM00363 S4 RNA-binding domain BA953_05335 SM01211 BA953_05335 BA953_05340 SM00062 Bacterial periplasmic substrate-binding proteins BA953_05380 SM00271 DnaJ molecular chaperone homology domain BA953_05465 SM00857 Resolvase, N terminal domain BA953_05495 SM00530 Helix-turn-helix XRE-family like proteins BA953_05510 SM00342 helix_turn_helix, arabinose operon control protein BA953_05545 SM00862 Transcriptional regulatory protein, C terminal BA953_05565 SM00382 ATPases associated with a variety of cellular activities BA953_05570 SM00342 helix_turn_helix, arabinose operon control protein BA953_05580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BA953_05580 SM00091 PAS domain BA953_05580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_05615 SM00563 Phosphate acyltransferases BA953_05620 SM00260 Two component signalling adaptor domain BA953_05620 SM00448 cheY-homologous receiver domain BA953_05660 SM00495 Chitin-binding domain type 3 BA953_05670 SM00116 Domain in cystathionine beta-synthase and other proteins. BA953_05670 SM01240 BA953_05670 BA953_05685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_05685 SM00267 diguanylate cyclase BA953_05695 SM00382 ATPases associated with a variety of cellular activities BA953_05700 SM00564 beta-propeller repeat BA953_05720 SM00530 Helix-turn-helix XRE-family like proteins BA953_05740 SM00925 MltA specific insert domain BA953_05820 SM00382 ATPases associated with a variety of cellular activities BA953_05850 SM00091 PAS domain BA953_05850 SM00387 Histidine kinase-like ATPases BA953_05850 SM00388 His Kinase A (phosphoacceptor) domain BA953_05855 SM00448 cheY-homologous receiver domain BA953_05855 SM00862 Transcriptional regulatory protein, C terminal BA953_05900 SM01323 BA953_05900 BA953_05915 SM00116 Domain in cystathionine beta-synthase and other proteins. BA953_05960 SM00342 helix_turn_helix, arabinose operon control protein BA953_05985 SM00354 helix_turn _helix lactose operon repressor BA953_06010 SM00354 helix_turn _helix lactose operon repressor BA953_06015 SM01038 Beta galactosidase small chain BA953_06065 SM00342 helix_turn_helix, arabinose operon control protein BA953_06085 SM00028 Tetratricopeptide repeats BA953_06135 SM00858 BA953_06135 BA953_06140 SM00382 ATPases associated with a variety of cellular activities BA953_06165 SM00342 helix_turn_helix, arabinose operon control protein BA953_06190 SM00838 Elongation factor G C-terminus BA953_06190 SM00889 Elongation factor G, domain IV BA953_06195 SM00562 BA953_06195 BA953_06220 SM00271 DnaJ molecular chaperone homology domain BA953_06290 SM00382 ATPases associated with a variety of cellular activities BA953_06290 SM01086 C-terminal, D2-small domain, of ClpB protein BA953_06300 SM00363 S4 RNA-binding domain BA953_06310 SM00062 Bacterial periplasmic substrate-binding proteins BA953_06320 SM00830 Chorismate mutase type II BA953_06330 SM00052 Putative diguanylate phosphodiesterase BA953_06330 SM00267 diguanylate cyclase BA953_06350 SM00382 ATPases associated with a variety of cellular activities BA953_06365 SM00830 Chorismate mutase type II BA953_06380 SM00448 cheY-homologous receiver domain BA953_06380 SM00850 LytTr DNA-binding domain BA953_06445 SM00904 Riboflavin kinase BA953_06460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA953_06495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_06505 SM00927 DNA mismatch repair enzyme MutH BA953_06525 SM00382 ATPases associated with a variety of cellular activities BA953_06535 SM00347 helix_turn_helix multiple antibiotic resistance protein BA953_06540 SM00028 Tetratricopeptide repeats BA953_06545 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_06545 SM00322 K homology RNA-binding domain BA953_06550 SM01387 BA953_06550 BA953_06605 SM00448 cheY-homologous receiver domain BA953_06605 SM00862 Transcriptional regulatory protein, C terminal BA953_06620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_06620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_06630 SM00880 BA953_06630 BA953_06630 SM01118 BA953_06630 BA953_06645 SM00287 Bacterial SH3 domain homologues BA953_06655 SM00382 ATPases associated with a variety of cellular activities BA953_06665 SM01192 BA953_06665 BA953_06665 SM01193 BA953_06665 BA953_06680 SM00954 Region found in RelA / SpoT proteins BA953_06690 SM00073 Histidine Phosphotransfer domain BA953_06690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_06690 SM00387 Histidine kinase-like ATPases BA953_06690 SM00388 His Kinase A (phosphoacceptor) domain BA953_06690 SM00448 cheY-homologous receiver domain BA953_06715 SM00358 Double-stranded RNA binding motif BA953_06715 SM00535 Ribonuclease III family BA953_06725 SM00838 Elongation factor G C-terminus BA953_06855 SM00014 Acid phosphatase homologues BA953_06860 SM00014 Acid phosphatase homologues BA953_06865 SM00917 LeuA allosteric (dimerisation) domain BA953_06870 SM01329 BA953_06870 BA953_06930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_06975 SM00829 Enoylreductase BA953_07045 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BA953_07055 SM00382 ATPases associated with a variety of cellular activities BA953_07065 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BA953_07065 SM00534 ATPase domain of DNA mismatch repair MUTS family BA953_07125 SM00487 DEAD-like helicases superfamily BA953_07125 SM00490 helicase superfamily c-terminal domain BA953_07130 SM00670 Large family of predicted nucleotide-binding domains BA953_07205 SM00563 Phosphate acyltransferases BA953_07240 SM00382 ATPases associated with a variety of cellular activities BA953_07250 SM00116 Domain in cystathionine beta-synthase and other proteins. BA953_07270 SM00382 ATPases associated with a variety of cellular activities BA953_07300 SM00924 MgtE intracellular N domain BA953_07305 SM01018 B12 binding domain BA953_07400 SM00448 cheY-homologous receiver domain BA953_07400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_07405 SM00387 Histidine kinase-like ATPases BA953_07405 SM00388 His Kinase A (phosphoacceptor) domain BA953_07405 SM00448 cheY-homologous receiver domain BA953_07485 SM00662 RNA polymerases D BA953_07490 SM00363 S4 RNA-binding domain BA953_07490 SM01390 BA953_07490 BA953_07555 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BA953_07560 SM01374 BA953_07560 BA953_07580 SM00322 K homology RNA-binding domain BA953_07595 SM01382 BA953_07595 BA953_07595 SM01383 BA953_07595 BA953_07615 SM01403 BA953_07615 BA953_07620 SM00967 RNA 2'-O ribose methyltransferase substrate binding BA953_07625 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_07625 SM00357 Cold shock protein domain BA953_07625 SM00955 BA953_07625 BA953_07635 SM00671 Sel1-like repeats. BA953_07640 SM00788 Adenylosuccinate synthetase BA953_07670 SM00382 ATPases associated with a variety of cellular activities BA953_07695 SM00100 Cyclic nucleotide-monophosphate binding domain BA953_07695 SM00419 helix_turn_helix, cAMP Regulatory protein BA953_07700 SM01150 BA953_07700 BA953_07790 SM00421 helix_turn_helix, Lux Regulon BA953_07790 SM00448 cheY-homologous receiver domain BA953_07815 SM00387 Histidine kinase-like ATPases BA953_07815 SM00388 His Kinase A (phosphoacceptor) domain BA953_07815 SM00448 cheY-homologous receiver domain BA953_07830 SM00479 BA953_07830 BA953_07850 SM00878 Biotin carboxylase C-terminal domain BA953_07870 SM00267 diguanylate cyclase BA953_07875 SM00422 helix_turn_helix, mercury resistance BA953_07880 SM00798 AICARFT/IMPCHase bienzyme BA953_07880 SM00851 MGS-like domain BA953_07885 SM01209 BA953_07885 BA953_07885 SM01210 BA953_07885 BA953_07895 SM00411 bacterial (prokaryotic) histone like domain BA953_07915 SM00986 Uracil DNA glycosylase superfamily BA953_07915 SM00987 UreE urease accessory protein, C-terminal domain BA953_07930 SM00971 Serine acetyltransferase, N-terminal BA953_07945 SM00450 Rhodanese Homology Domain BA953_08015 SM00382 ATPases associated with a variety of cellular activities BA953_08015 SM01086 C-terminal, D2-small domain, of ClpB protein BA953_08030 SM00354 helix_turn _helix lactose operon repressor BA953_08035 SM00487 DEAD-like helicases superfamily BA953_08035 SM00490 helicase superfamily c-terminal domain BA953_08045 SM00919 Malic enzyme, NAD binding domain BA953_08045 SM01274 BA953_08045 BA953_08100 SM00883 Chaperonin 10 Kd subunit BA953_08130 SM00155 Phospholipase D. Active site motifs. BA953_08155 SM00829 Enoylreductase BA953_08225 SM00984 UDP binding domain BA953_08315 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BA953_08315 SM01232 BA953_08315 BA953_08405 SM00965 Secretin and TonB N terminus short domain BA953_08420 SM00072 Guanylate kinase homologues. BA953_08425 SM01409 BA953_08425 BA953_08430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_08430 SM00954 Region found in RelA / SpoT proteins BA953_08440 SM00487 DEAD-like helicases superfamily BA953_08440 SM00490 helicase superfamily c-terminal domain BA953_08475 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_08475 SM00732 Likely ribonuclease with RNase H fold. BA953_08490 SM00448 cheY-homologous receiver domain BA953_08490 SM00862 Transcriptional regulatory protein, C terminal BA953_08495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_08495 SM00387 Histidine kinase-like ATPases BA953_08495 SM00388 His Kinase A (phosphoacceptor) domain BA953_08545 SM00382 ATPases associated with a variety of cellular activities BA953_08560 SM00363 S4 RNA-binding domain BA953_08605 SM01230 BA953_08605 BA953_08610 SM00091 PAS domain BA953_08610 SM00387 Histidine kinase-like ATPases BA953_08610 SM00388 His Kinase A (phosphoacceptor) domain BA953_08615 SM00382 ATPases associated with a variety of cellular activities BA953_08615 SM00448 cheY-homologous receiver domain BA953_08620 SM00052 Putative diguanylate phosphodiesterase BA953_08620 SM00267 diguanylate cyclase BA953_08620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_08690 SM01001 AIR carboxylase BA953_08905 SM00563 Phosphate acyltransferases BA953_08915 SM00382 ATPases associated with a variety of cellular activities BA953_08945 SM00829 Enoylreductase BA953_08980 SM00836 DALR anticodon binding domain BA953_08995 SM00387 Histidine kinase-like ATPases BA953_08995 SM00433 TopoisomeraseII BA953_09005 SM00480 DNA polymerase III beta subunit BA953_09010 SM00382 ATPases associated with a variety of cellular activities BA953_09010 SM00760 Bacterial dnaA protein helix-turn-helix domain BA953_09015 SM00062 Bacterial periplasmic substrate-binding proteins BA953_09015 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BA953_09025 SM00382 ATPases associated with a variety of cellular activities BA953_09055 SM01228 BA953_09055 BA953_09070 SM00470 ParB-like nuclease domain BA953_09110 SM00382 ATPases associated with a variety of cellular activities BA953_09130 SM00062 Bacterial periplasmic substrate-binding proteins BA953_09145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_09145 SM00267 diguanylate cyclase BA953_09255 SM00876 Biotin and Thiamin Synthesis associated domain BA953_09280 SM00344 helix_turn_helix ASNC type BA953_09285 SM00052 Putative diguanylate phosphodiesterase BA953_09285 SM00091 PAS domain BA953_09285 SM00267 diguanylate cyclase BA953_09325 SM00999 Aerolysin toxin BA953_09335 SM00862 Transcriptional regulatory protein, C terminal BA953_09345 SM00342 helix_turn_helix, arabinose operon control protein BA953_09400 SM01004 Delta-aminolevulinic acid dehydratase BA953_09410 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BA953_09410 SM00474 3'-5' exonuclease BA953_09410 SM00475 5'-3' exonuclease BA953_09410 SM00482 DNA polymerase A domain BA953_09440 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_09510 SM00382 ATPases associated with a variety of cellular activities BA953_09540 SM00448 cheY-homologous receiver domain BA953_09590 SM00342 helix_turn_helix, arabinose operon control protein BA953_09670 SM00342 helix_turn_helix, arabinose operon control protein BA953_09680 SM00341 Helicase and RNase D C-terminal BA953_09680 SM00487 DEAD-like helicases superfamily BA953_09680 SM00490 helicase superfamily c-terminal domain BA953_09680 SM00956 BA953_09680 BA953_09700 SM00487 DEAD-like helicases superfamily BA953_09700 SM00490 helicase superfamily c-terminal domain BA953_09710 SM00357 Cold shock protein domain BA953_09710 SM00382 ATPases associated with a variety of cellular activities BA953_09710 SM00959 Rho termination factor, N-terminal domain BA953_09805 SM01219 BA953_09805 BA953_09840 SM00052 Putative diguanylate phosphodiesterase BA953_09840 SM00267 diguanylate cyclase BA953_09840 SM00897 FIST N domain BA953_09840 SM01204 BA953_09840 BA953_09845 SM01144 BA953_09845 BA953_09875 SM00052 Putative diguanylate phosphodiesterase BA953_09880 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA953_09885 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA953_09890 SM00404 Protein tyrosine phosphatase, catalytic domain motif BA953_09945 SM00382 ATPases associated with a variety of cellular activities BA953_09945 SM00962 SRP54-type protein, GTPase domain BA953_09945 SM00963 SRP54-type protein, helical bundle domain BA953_09950 SM00382 ATPases associated with a variety of cellular activities BA953_09965 SM00450 Rhodanese Homology Domain BA953_09990 SM00563 Phosphate acyltransferases BA953_10050 SM00360 RNA recognition motif BA953_10140 SM00859 Semialdehyde dehydrogenase, NAD binding domain BA953_10260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_10260 SM00387 Histidine kinase-like ATPases BA953_10260 SM00388 His Kinase A (phosphoacceptor) domain BA953_10265 SM00448 cheY-homologous receiver domain BA953_10265 SM00862 Transcriptional regulatory protein, C terminal BA953_10300 SM00841 Elongation factor P, C-terminal BA953_10300 SM01185 BA953_10300 BA953_10375 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BA953_10375 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BA953_10380 SM00649 Ribosomal protein L11/L12 BA953_10405 SM00663 RNA polymerase I subunit A N-terminus BA953_10450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_10450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_10470 SM00479 BA953_10470 BA953_10535 SM00257 Lysin motif BA953_10535 SM00646 BA953_10535 BA953_10540 SM00853 MutL C terminal dimerisation domain BA953_10540 SM01340 BA953_10540 BA953_10560 SM00244 prohibitin homologues BA953_10565 SM00244 prohibitin homologues BA953_10580 SM00320 WD40 repeats BA953_10620 SM00838 Elongation factor G C-terminus BA953_10620 SM00889 Elongation factor G, domain IV BA953_10660 SM01005 Alanine racemase, C-terminal domain BA953_10690 SM00382 ATPases associated with a variety of cellular activities BA953_10765 SM00382 ATPases associated with a variety of cellular activities BA953_10805 SM00421 helix_turn_helix, Lux Regulon BA953_10815 SM00052 Putative diguanylate phosphodiesterase BA953_10815 SM00267 diguanylate cyclase BA953_10835 SM00965 Secretin and TonB N terminus short domain BA953_10840 SM00382 ATPases associated with a variety of cellular activities BA953_10845 SM00028 Tetratricopeptide repeats BA953_10850 SM00382 ATPases associated with a variety of cellular activities BA953_10920 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_10995 SM00478 endonuclease III BA953_10995 SM00525 BA953_10995 BA953_11010 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_11025 SM01152 BA953_11025 BA953_11055 SM00732 Likely ribonuclease with RNase H fold. BA953_11080 SM00731 SprT homologues. BA953_11095 SM00861 Transketolase, pyrimidine binding domain BA953_11100 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA953_11140 SM00267 diguanylate cyclase BA953_11145 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_11145 SM00895 BA953_11145 BA953_11155 SM00420 helix_turn_helix, Deoxyribose operon repressor BA953_11155 SM01134 BA953_11155 BA953_11170 SM00448 cheY-homologous receiver domain BA953_11170 SM00862 Transcriptional regulatory protein, C terminal BA953_11175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_11175 SM00387 Histidine kinase-like ATPases BA953_11175 SM00388 His Kinase A (phosphoacceptor) domain BA953_11185 SM00563 Phosphate acyltransferases BA953_11235 SM00650 Ribosomal RNA adenine dimethylases BA953_11255 SM00271 DnaJ molecular chaperone homology domain BA953_11270 SM00400 zinc finger BA953_11270 SM00493 BA953_11270 BA953_11270 SM00766 DNA primase DnaG DnaB-binding BA953_11295 SM01207 BA953_11295 BA953_11300 SM00905 Dihydroneopterin aldolase BA953_11345 SM00257 Lysin motif BA953_11355 SM01091 Transporter associated domain BA953_11365 SM00382 ATPases associated with a variety of cellular activities BA953_11365 SM00962 SRP54-type protein, GTPase domain BA953_11365 SM00963 SRP54-type protein, helical bundle domain BA953_11430 SM00644 BA953_11430 BA953_11485 SM00947 Carbonic anhydrase BA953_11495 SM00382 ATPases associated with a variety of cellular activities BA953_11540 SM00487 DEAD-like helicases superfamily BA953_11540 SM00490 helicase superfamily c-terminal domain BA953_11540 SM00847 Helicase associated domain (HA2) Add an annotation BA953_11565 SM00938 Nitrogen regulatory protein P-II BA953_11585 SM00382 ATPases associated with a variety of cellular activities BA953_11595 SM01068 Putative carbohydrate binding domain BA953_11615 SM00382 ATPases associated with a variety of cellular activities BA953_11620 SM00382 ATPases associated with a variety of cellular activities BA953_11680 SM00363 S4 RNA-binding domain BA953_11705 SM01103 BA953_11705 BA953_11715 SM00382 ATPases associated with a variety of cellular activities BA953_11740 SM00052 Putative diguanylate phosphodiesterase BA953_11740 SM00267 diguanylate cyclase BA953_11750 SM00487 DEAD-like helicases superfamily BA953_11750 SM00490 helicase superfamily c-terminal domain BA953_11765 SM00937 BA953_11765 BA953_11785 SM00052 Putative diguanylate phosphodiesterase BA953_11785 SM00091 PAS domain BA953_11785 SM00267 diguanylate cyclase BA953_11820 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_11865 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_11870 SM00091 PAS domain BA953_11870 SM00267 diguanylate cyclase BA953_11875 SM00073 Histidine Phosphotransfer domain BA953_11875 SM00091 PAS domain BA953_11875 SM00387 Histidine kinase-like ATPases BA953_11875 SM00388 His Kinase A (phosphoacceptor) domain BA953_11875 SM00448 cheY-homologous receiver domain BA953_11910 SM00387 Histidine kinase-like ATPases BA953_11910 SM00433 TopoisomeraseII BA953_11915 SM00434 DNA Topoisomerase IV BA953_11920 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA953_11925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA953_11975 SM00749 bacterial OsmY and nodulation domain BA953_12060 SM00842 Cell division protein FtsA BA953_12065 SM00864 Tubulin/FtsZ family, GTPase domain BA953_12065 SM00865 Tubulin/FtsZ family, C-terminal domain BA953_12075 SM00957 SecA DEAD-like domain BA953_12075 SM00958 SecA preprotein cross-linking domain BA953_12090 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BA953_12095 SM00851 MGS-like domain BA953_12095 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BA953_12115 SM00518 AP endonuclease family 2 BA953_12120 SM00986 Uracil DNA glycosylase superfamily BA953_12120 SM00987 UreE urease accessory protein, C-terminal domain BA953_12160 SM01133 BA953_12160 BA953_12165 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BA953_12195 SM00382 ATPases associated with a variety of cellular activities BA953_12220 SM00464 Found in ATP-dependent protease La (LON) BA953_12270 SM00900 BA953_12270 BA953_12310 SM00487 DEAD-like helicases superfamily BA953_12310 SM00490 helicase superfamily c-terminal domain BA953_12325 SM00495 Chitin-binding domain type 3 BA953_12325 SM00636 BA953_12325 BA953_12375 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BA953_12430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_12475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BA953_12485 SM00935 Outer membrane protein (OmpH-like) BA953_12515 SM00481 DNA polymerase alpha chain like domain BA953_12525 SM00977 TilS substrate C-terminal domain BA953_12535 SM00938 Nitrogen regulatory protein P-II BA953_12550 SM00257 Lysin motif BA953_12555 SM00849 Metallo-beta-lactamase superfamily BA953_12570 SM00479 BA953_12570 BA953_12635 SM00382 ATPases associated with a variety of cellular activities BA953_12635 SM00930 BA953_12635 BA953_12650 SM00354 helix_turn _helix lactose operon repressor BA953_12660 SM00642 Alpha-amylase domain BA953_12715 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_12730 SM00936 Penicillin-binding protein 5, C-terminal domain BA953_12785 SM00116 Domain in cystathionine beta-synthase and other proteins. BA953_12785 SM01091 Transporter associated domain BA953_12800 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_12835 SM00771 ZipA, C-terminal domain (FtsZ-binding) BA953_12840 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BA953_12840 SM00292 breast cancer carboxy-terminal domain BA953_12840 SM00532 Ligase N family BA953_12860 SM00244 prohibitin homologues BA953_12890 SM00938 Nitrogen regulatory protein P-II BA953_12895 SM00116 Domain in cystathionine beta-synthase and other proteins. BA953_12920 SM00862 Transcriptional regulatory protein, C terminal BA953_12925 SM00387 Histidine kinase-like ATPases BA953_12940 SM00862 Transcriptional regulatory protein, C terminal BA953_13015 SM00530 Helix-turn-helix XRE-family like proteins BA953_13050 SM00858 BA953_13050 BA953_13055 SM00260 Two component signalling adaptor domain BA953_13055 SM00448 cheY-homologous receiver domain BA953_13060 SM00138 Methyltransferase, chemotaxis proteins BA953_13105 SM00047 Lysozyme subfamily 2 BA953_13245 SM01400 BA953_13245 BA953_13265 SM00937 BA953_13265 BA953_13340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_13340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_13355 SM01130 BA953_13355 BA953_13370 SM00479 BA953_13370 BA953_13390 SM00478 endonuclease III BA953_13390 SM00525 BA953_13390 BA953_13400 SM00900 BA953_13400 BA953_13440 SM00858 BA953_13440 BA953_13600 SM00382 ATPases associated with a variety of cellular activities BA953_13625 SM00382 ATPases associated with a variety of cellular activities BA953_13685 SM00822 BA953_13685 BA953_13685 SM00823 Phosphopantetheine attachment site BA953_13685 SM00825 Beta-ketoacyl synthase BA953_13685 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BA953_13765 SM00487 DEAD-like helicases superfamily BA953_13765 SM00490 helicase superfamily c-terminal domain BA953_13770 SM00382 ATPases associated with a variety of cellular activities BA953_13770 SM00448 cheY-homologous receiver domain BA953_13785 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_13790 SM00852 Probable molybdopterin binding domain BA953_13820 SM00116 Domain in cystathionine beta-synthase and other proteins. BA953_13850 SM00862 Transcriptional regulatory protein, C terminal BA953_13910 SM00905 Dihydroneopterin aldolase BA953_13920 SM00226 Low molecular weight phosphatase family BA953_13945 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BA953_13945 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BA953_13945 SM00493 BA953_13945 BA953_13950 SM00342 helix_turn_helix, arabinose operon control protein BA953_13990 SM00382 ATPases associated with a variety of cellular activities BA953_13990 SM00448 cheY-homologous receiver domain BA953_13995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BA953_13995 SM00091 PAS domain BA953_13995 SM00387 Histidine kinase-like ATPases BA953_14005 SM00052 Putative diguanylate phosphodiesterase BA953_14010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_14020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_14020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_14045 SM00073 Histidine Phosphotransfer domain BA953_14065 SM00859 Semialdehyde dehydrogenase, NAD binding domain BA953_14150 SM00098 Alkaline phosphatase homologues BA953_14170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_14180 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA953_14205 SM00052 Putative diguanylate phosphodiesterase BA953_14220 SM00840 BA953_14220 BA953_14230 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_14260 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BA953_14260 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BA953_14260 SM00493 BA953_14260 BA953_14295 SM00354 helix_turn _helix lactose operon repressor BA953_14305 SM00448 cheY-homologous receiver domain BA953_14305 SM00862 Transcriptional regulatory protein, C terminal BA953_14335 SM00342 helix_turn_helix, arabinose operon control protein BA953_14395 SM00357 Cold shock protein domain BA953_14405 SM00382 ATPases associated with a variety of cellular activities BA953_14405 SM01086 C-terminal, D2-small domain, of ClpB protein BA953_14465 SM00822 BA953_14465 BA953_14490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_14495 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BA953_14500 SM00382 ATPases associated with a variety of cellular activities BA953_14555 SM00028 Tetratricopeptide repeats BA953_14575 SM00020 Trypsin-like serine protease BA953_14590 SM00387 Histidine kinase-like ATPases BA953_14590 SM00388 His Kinase A (phosphoacceptor) domain BA953_14590 SM00448 cheY-homologous receiver domain BA953_14650 SM00387 Histidine kinase-like ATPases BA953_14650 SM00388 His Kinase A (phosphoacceptor) domain BA953_14655 SM00448 cheY-homologous receiver domain BA953_14655 SM00862 Transcriptional regulatory protein, C terminal BA953_14700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_14700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_14705 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BA953_14725 SM00491 BA953_14725 BA953_14745 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_14745 SM00876 Biotin and Thiamin Synthesis associated domain BA953_14835 SM00528 Domain in histone-like proteins of HNS family BA953_14895 SM01131 BA953_14895 BA953_14910 SM00382 ATPases associated with a variety of cellular activities BA953_14915 SM00382 ATPases associated with a variety of cellular activities BA953_14935 SM00382 ATPases associated with a variety of cellular activities BA953_14990 SM00155 Phospholipase D. Active site motifs. BA953_15015 SM00382 ATPases associated with a variety of cellular activities BA953_15070 SM00387 Histidine kinase-like ATPases BA953_15070 SM00448 cheY-homologous receiver domain BA953_15075 SM00387 Histidine kinase-like ATPases BA953_15075 SM00448 cheY-homologous receiver domain BA953_15080 SM00411 bacterial (prokaryotic) histone like domain BA953_15090 SM00841 Elongation factor P, C-terminal BA953_15090 SM01185 BA953_15090 BA953_15100 SM00458 Ricin-type beta-trefoil BA953_15120 SM00421 helix_turn_helix, Lux Regulon BA953_15120 SM00448 cheY-homologous receiver domain BA953_15125 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BA953_15125 SM00465 GIY-YIG type nucleases (URI domain) BA953_15190 SM00267 diguanylate cyclase BA953_15200 SM00873 B3/4 domain BA953_15200 SM00874 tRNA synthetase B5 domain BA953_15200 SM00896 Ferredoxin-fold anticodon binding domain BA953_15270 SM00450 Rhodanese Homology Domain BA953_15275 SM00862 Transcriptional regulatory protein, C terminal BA953_15310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_15310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_15320 SM00052 Putative diguanylate phosphodiesterase BA953_15360 SM00382 ATPases associated with a variety of cellular activities BA953_15410 SM00882 Coenzyme A transferase BA953_15415 SM00882 Coenzyme A transferase BA953_15530 SM00448 cheY-homologous receiver domain BA953_15535 SM00382 ATPases associated with a variety of cellular activities BA953_15545 SM00387 Histidine kinase-like ATPases BA953_15545 SM00388 His Kinase A (phosphoacceptor) domain BA953_15545 SM00448 cheY-homologous receiver domain BA953_15555 SM01130 BA953_15555 BA953_15620 SM00448 cheY-homologous receiver domain BA953_15620 SM00862 Transcriptional regulatory protein, C terminal BA953_15625 SM00388 His Kinase A (phosphoacceptor) domain BA953_15640 SM00354 helix_turn _helix lactose operon repressor BA953_15660 SM00354 helix_turn _helix lactose operon repressor BA953_15740 SM00342 helix_turn_helix, arabinose operon control protein BA953_15790 SM00052 Putative diguanylate phosphodiesterase BA953_15790 SM00267 diguanylate cyclase BA953_15950 SM00887 Ethylbenzene dehydrogenase BA953_16010 SM00862 Transcriptional regulatory protein, C terminal BA953_16030 SM00862 Transcriptional regulatory protein, C terminal BA953_16050 SM00387 Histidine kinase-like ATPases BA953_16055 SM00448 cheY-homologous receiver domain BA953_16055 SM00862 Transcriptional regulatory protein, C terminal BA953_16065 SM00487 DEAD-like helicases superfamily BA953_16065 SM00490 helicase superfamily c-terminal domain BA953_16070 SM00363 S4 RNA-binding domain BA953_16095 SM00382 ATPases associated with a variety of cellular activities BA953_16125 SM00112 Cadherin repeats. BA953_16155 SM00852 Probable molybdopterin binding domain BA953_16230 SM00271 DnaJ molecular chaperone homology domain BA953_16240 SM00052 Putative diguanylate phosphodiesterase BA953_16240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_16240 SM00267 diguanylate cyclase BA953_16255 SM00382 ATPases associated with a variety of cellular activities BA953_16270 SM00797 Allophanate hydrolase subunit 2 BA953_16275 SM00796 Allophanate hydrolase subunit 1 BA953_16305 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BA953_16320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_16320 SM00387 Histidine kinase-like ATPases BA953_16325 SM00421 helix_turn_helix, Lux Regulon BA953_16325 SM00448 cheY-homologous receiver domain BA953_16335 SM00052 Putative diguanylate phosphodiesterase BA953_16360 SM00867 YceI-like domain BA953_16365 SM00116 Domain in cystathionine beta-synthase and other proteins. BA953_16405 SM00062 Bacterial periplasmic substrate-binding proteins BA953_16410 SM00052 Putative diguanylate phosphodiesterase BA953_16410 SM00267 diguanylate cyclase BA953_16410 SM01049 BA953_16410 BA953_16415 SM00830 Chorismate mutase type II BA953_16430 SM00448 cheY-homologous receiver domain BA953_16430 SM00862 Transcriptional regulatory protein, C terminal BA953_16435 SM00387 Histidine kinase-like ATPases BA953_16435 SM00388 His Kinase A (phosphoacceptor) domain BA953_16435 SM00448 cheY-homologous receiver domain BA953_16440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_16455 SM00782 PhnA Zinc-Ribbon BA953_16500 SM00881 CoA binding domain BA953_16550 SM00954 Region found in RelA / SpoT proteins BA953_16665 SM00448 cheY-homologous receiver domain BA953_16665 SM00862 Transcriptional regulatory protein, C terminal BA953_16670 SM00387 Histidine kinase-like ATPases BA953_16670 SM00388 His Kinase A (phosphoacceptor) domain BA953_16680 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BA953_16680 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BA953_16695 SM00267 diguanylate cyclase BA953_16700 SM00267 diguanylate cyclase BA953_16700 SM00448 cheY-homologous receiver domain BA953_16710 SM00382 ATPases associated with a variety of cellular activities BA953_16740 SM00354 helix_turn _helix lactose operon repressor BA953_16760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BA953_16760 SM00267 diguanylate cyclase BA953_16770 SM00342 helix_turn_helix, arabinose operon control protein BA953_16790 SM00073 Histidine Phosphotransfer domain BA953_16790 SM00387 Histidine kinase-like ATPases BA953_16790 SM00388 His Kinase A (phosphoacceptor) domain BA953_16790 SM00448 cheY-homologous receiver domain BA953_16800 SM00851 MGS-like domain BA953_16805 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_16805 SM00866 BA953_16805 BA953_16810 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BA953_16860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_16930 SM00487 DEAD-like helicases superfamily BA953_16930 SM00490 helicase superfamily c-terminal domain BA953_16955 SM00487 DEAD-like helicases superfamily BA953_16955 SM00490 helicase superfamily c-terminal domain BA953_16965 SM00852 Probable molybdopterin binding domain BA953_16980 SM00450 Rhodanese Homology Domain BA953_17010 SM00861 Transketolase, pyrimidine binding domain BA953_17015 SM00344 helix_turn_helix ASNC type BA953_17025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_17030 SM00267 diguanylate cyclase BA953_17040 SM00267 diguanylate cyclase BA953_17045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_17060 SM00495 Chitin-binding domain type 3 BA953_17070 SM00833 Cobalamin synthesis protein cobW C-terminal domain BA953_17090 SM00387 Histidine kinase-like ATPases BA953_17090 SM00448 cheY-homologous receiver domain BA953_17185 SM00943 Bifunctional DNA primase/polymerase, N-terminal BA953_17230 SM00382 ATPases associated with a variety of cellular activities BA953_17245 SM01012 BA953_17245 BA953_17260 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BA953_17400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_17400 SM00267 diguanylate cyclase BA953_17405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_17405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_17415 SM00861 Transketolase, pyrimidine binding domain BA953_17425 SM00267 diguanylate cyclase BA953_17430 SM00893 Electron transfer flavoprotein domain BA953_17435 SM00893 Electron transfer flavoprotein domain BA953_17450 SM00822 BA953_17450 BA953_17485 SM00422 helix_turn_helix, mercury resistance BA953_17515 SM00342 helix_turn_helix, arabinose operon control protein BA953_17520 SM00342 helix_turn_helix, arabinose operon control protein BA953_17575 SM00052 Putative diguanylate phosphodiesterase BA953_17630 SM00052 Putative diguanylate phosphodiesterase BA953_17630 SM00267 diguanylate cyclase BA953_17640 SM00422 helix_turn_helix, mercury resistance BA953_17645 SM00100 Cyclic nucleotide-monophosphate binding domain BA953_17645 SM00116 Domain in cystathionine beta-synthase and other proteins. BA953_17650 SM00479 BA953_17650 BA953_17660 SM00347 helix_turn_helix multiple antibiotic resistance protein BA953_17665 SM00267 diguanylate cyclase BA953_17670 SM00344 helix_turn_helix ASNC type BA953_17700 SM00327 von Willebrand factor (vWF) type A domain BA953_17705 SM00382 ATPases associated with a variety of cellular activities BA953_17730 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA953_17730 SM00495 Chitin-binding domain type 3 BA953_17730 SM00636 BA953_17730 BA953_17740 SM00260 Two component signalling adaptor domain BA953_17740 SM00448 cheY-homologous receiver domain BA953_17745 SM00267 diguanylate cyclase BA953_17785 SM00631 BA953_17785 BA953_17805 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_17805 SM00866 BA953_17805 BA953_17815 SM00382 ATPases associated with a variety of cellular activities BA953_17910 SM00862 Transcriptional regulatory protein, C terminal BA953_18000 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BA953_18000 SM00091 PAS domain BA953_18000 SM00387 Histidine kinase-like ATPases BA953_18000 SM00388 His Kinase A (phosphoacceptor) domain BA953_18000 SM00448 cheY-homologous receiver domain BA953_18005 SM00448 cheY-homologous receiver domain BA953_18010 SM00448 cheY-homologous receiver domain BA953_18020 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA953_18065 SM01057 Eukaryotic-type carbonic anhydrase BA953_18090 SM00829 Enoylreductase BA953_18100 SM00052 Putative diguanylate phosphodiesterase BA953_18105 SM00448 cheY-homologous receiver domain BA953_18110 SM00530 Helix-turn-helix XRE-family like proteins BA953_18135 SM00387 Histidine kinase-like ATPases BA953_18135 SM00388 His Kinase A (phosphoacceptor) domain BA953_18140 SM00448 cheY-homologous receiver domain BA953_18140 SM00862 Transcriptional regulatory protein, C terminal BA953_18155 SM00382 ATPases associated with a variety of cellular activities BA953_18170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_18170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_18190 SM00327 von Willebrand factor (vWF) type A domain BA953_18195 SM00028 Tetratricopeptide repeats BA953_18215 SM01266 BA953_18215 BA953_18240 SM00344 helix_turn_helix ASNC type BA953_18255 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_18265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_18265 SM00387 Histidine kinase-like ATPases BA953_18265 SM00388 His Kinase A (phosphoacceptor) domain BA953_18270 SM00448 cheY-homologous receiver domain BA953_18270 SM00862 Transcriptional regulatory protein, C terminal BA953_18285 SM00342 helix_turn_helix, arabinose operon control protein BA953_18320 SM00387 Histidine kinase-like ATPases BA953_18320 SM00388 His Kinase A (phosphoacceptor) domain BA953_18320 SM00448 cheY-homologous receiver domain BA953_18335 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA953_18375 SM00382 ATPases associated with a variety of cellular activities BA953_18395 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_18425 SM00382 ATPases associated with a variety of cellular activities BA953_18435 SM00342 helix_turn_helix, arabinose operon control protein BA953_18465 SM00316 Ribosomal protein S1-like RNA-binding domain BA953_18465 SM00357 Cold shock protein domain BA953_18465 SM00955 BA953_18465 BA953_18475 SM00487 DEAD-like helicases superfamily BA953_18475 SM00490 helicase superfamily c-terminal domain BA953_18485 SM00387 Histidine kinase-like ATPases BA953_18490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_18495 SM00354 helix_turn _helix lactose operon repressor BA953_18515 SM00382 ATPases associated with a variety of cellular activities BA953_18530 SM00495 Chitin-binding domain type 3 BA953_18540 SM00984 UDP binding domain BA953_18545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_18545 SM00387 Histidine kinase-like ATPases BA953_18570 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_18595 SM00506 Appr-1"-p processing enzyme BA953_18600 SM00886 Stress responsive A/B Barrel Domain BA953_18620 SM00671 Sel1-like repeats. BA953_18680 SM00354 helix_turn _helix lactose operon repressor BA953_18685 SM01350 BA953_18685 BA953_18735 SM00267 diguanylate cyclase BA953_18845 SM00342 helix_turn_helix, arabinose operon control protein BA953_18885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BA953_18890 SM00530 Helix-turn-helix XRE-family like proteins BA953_18895 SM00267 diguanylate cyclase BA953_18905 SM00267 diguanylate cyclase BA953_18915 SM00387 Histidine kinase-like ATPases BA953_18915 SM00388 His Kinase A (phosphoacceptor) domain BA953_18920 SM00448 cheY-homologous receiver domain BA953_18920 SM00862 Transcriptional regulatory protein, C terminal BA953_18935 SM00829 Enoylreductase BA953_18955 SM00822 BA953_18955 BA953_18955 SM00823 Phosphopantetheine attachment site BA953_18955 SM00825 Beta-ketoacyl synthase BA953_18955 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BA953_18985 SM00642 Alpha-amylase domain BA953_18990 SM00642 Alpha-amylase domain BA953_19025 SM00448 cheY-homologous receiver domain BA953_19025 SM00850 LytTr DNA-binding domain BA953_19030 SM00387 Histidine kinase-like ATPases BA953_19050 SM00382 ATPases associated with a variety of cellular activities BA953_19095 SM00936 Penicillin-binding protein 5, C-terminal domain BA953_19120 SM00357 Cold shock protein domain BA953_19125 SM01322 BA953_19125 BA953_19140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_19140 SM00382 ATPases associated with a variety of cellular activities BA953_19200 SM00052 Putative diguanylate phosphodiesterase BA953_19200 SM00267 diguanylate cyclase BA953_19220 SM00421 helix_turn_helix, Lux Regulon BA953_19225 SM00020 Trypsin-like serine protease BA953_19230 SM00020 Trypsin-like serine protease BA953_19240 SM00710 Parallel beta-helix repeats BA953_19290 SM00984 UDP binding domain BA953_19300 SM00226 Low molecular weight phosphatase family BA953_19315 SM00052 Putative diguanylate phosphodiesterase BA953_19330 SM00642 Alpha-amylase domain BA953_19345 SM00382 ATPases associated with a variety of cellular activities BA953_19355 SM00062 Bacterial periplasmic substrate-binding proteins BA953_19355 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BA953_19510 SM00936 Penicillin-binding protein 5, C-terminal domain BA953_19560 SM00862 Transcriptional regulatory protein, C terminal BA953_19695 SM00054 EF-hand, calcium binding motif BA953_19700 SM00729 Elongator protein 3, MiaB family, Radical SAM BA953_19715 SM00347 helix_turn_helix multiple antibiotic resistance protein BA953_19730 SM00342 helix_turn_helix, arabinose operon control protein BA953_19745 SM00382 ATPases associated with a variety of cellular activities BA953_19750 SM01130 BA953_19750 BA953_19780 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_19780 SM00895 BA953_19780 BA953_19805 SM00382 ATPases associated with a variety of cellular activities BA953_19810 SM00382 ATPases associated with a variety of cellular activities BA953_19860 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA953_19865 SM00487 DEAD-like helicases superfamily BA953_19865 SM00490 helicase superfamily c-terminal domain BA953_19875 SM00257 Lysin motif BA953_19885 SM00422 helix_turn_helix, mercury resistance BA953_19905 SM00028 Tetratricopeptide repeats BA953_19910 SM00028 Tetratricopeptide repeats BA953_19910 SM00267 diguanylate cyclase BA953_19965 SM00382 ATPases associated with a variety of cellular activities BA953_19975 SM00344 helix_turn_helix ASNC type BA953_20000 SM00342 helix_turn_helix, arabinose operon control protein BA953_20020 SM00421 helix_turn_helix, Lux Regulon BA953_20040 SM00052 Putative diguanylate phosphodiesterase BA953_20040 SM00267 diguanylate cyclase BA953_20045 SM00382 ATPases associated with a variety of cellular activities BA953_20050 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA953_20050 SM00495 Chitin-binding domain type 3 BA953_20050 SM00636 BA953_20050 BA953_20065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_20125 SM00420 helix_turn_helix, Deoxyribose operon repressor BA953_20125 SM01134 BA953_20125 BA953_20175 SM00062 Bacterial periplasmic substrate-binding proteins BA953_20320 SM00342 helix_turn_helix, arabinose operon control protein BA953_20335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_20340 SM00052 Putative diguanylate phosphodiesterase BA953_20345 SM00495 Chitin-binding domain type 3 BA953_20355 SM00342 helix_turn_helix, arabinose operon control protein BA953_20355 SM00871 Bacterial transcription activator, effector binding domain BA953_20370 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA953_20370 SM00495 Chitin-binding domain type 3 BA953_20380 SM00635 Bacterial Ig-like domain 2 BA953_20385 SM00052 Putative diguanylate phosphodiesterase BA953_20420 SM00342 helix_turn_helix, arabinose operon control protein BA953_20420 SM01009 AlkA N-terminal domain BA953_20435 SM00387 Histidine kinase-like ATPases BA953_20435 SM00388 His Kinase A (phosphoacceptor) domain BA953_20440 SM00448 cheY-homologous receiver domain BA953_20440 SM00862 Transcriptional regulatory protein, C terminal BA953_20480 SM00448 cheY-homologous receiver domain BA953_20480 SM00862 Transcriptional regulatory protein, C terminal BA953_20485 SM00387 Histidine kinase-like ATPases BA953_20485 SM00388 His Kinase A (phosphoacceptor) domain BA953_20535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA953_20565 SM00829 Enoylreductase BA953_20595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_20595 SM00267 diguanylate cyclase BA953_20610 SM00382 ATPases associated with a variety of cellular activities BA953_20670 SM00014 Acid phosphatase homologues BA953_20680 SM00342 helix_turn_helix, arabinose operon control protein BA953_20680 SM00871 Bacterial transcription activator, effector binding domain BA953_20710 SM00382 ATPases associated with a variety of cellular activities BA953_20750 SM01119 BA953_20750 BA953_20790 SM00382 ATPases associated with a variety of cellular activities BA953_20845 SM00857 Resolvase, N terminal domain BA953_20855 SM00100 Cyclic nucleotide-monophosphate binding domain BA953_20895 SM00342 helix_turn_helix, arabinose operon control protein BA953_20910 SM00331 Sigma factor PP2C-like phosphatases BA953_20910 SM00448 cheY-homologous receiver domain BA953_20920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_20925 SM00448 cheY-homologous receiver domain BA953_20935 SM00138 Methyltransferase, chemotaxis proteins BA953_20940 SM00091 PAS domain BA953_20940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_20940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_20945 SM00260 Two component signalling adaptor domain BA953_20950 SM00260 Two component signalling adaptor domain BA953_20955 SM00073 Histidine Phosphotransfer domain BA953_20955 SM00260 Two component signalling adaptor domain BA953_20955 SM00387 Histidine kinase-like ATPases BA953_20955 SM01231 BA953_20955 BA953_20960 SM00448 cheY-homologous receiver domain BA953_20970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_20970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_20980 SM00470 ParB-like nuclease domain BA953_21005 SM00382 ATPases associated with a variety of cellular activities BA953_21010 SM00382 ATPases associated with a variety of cellular activities BA953_21045 SM00822 BA953_21045 BA953_21065 SM00364 Leucine-rich repeats, bacterial type BA953_21065 SM00369 Leucine-rich repeats, typical (most populated) subfamily BA953_21100 SM00052 Putative diguanylate phosphodiesterase BA953_21100 SM00267 diguanylate cyclase BA953_21100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_21110 SM00347 helix_turn_helix multiple antibiotic resistance protein BA953_21135 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BA953_21225 SM00382 ATPases associated with a variety of cellular activities BA953_21230 SM00382 ATPases associated with a variety of cellular activities BA953_21255 SM00988 UreE urease accessory protein, N-terminal domain BA953_21300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_21300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_21305 SM00062 Bacterial periplasmic substrate-binding proteins BA953_21315 SM01119 BA953_21315 BA953_21420 SM00849 Metallo-beta-lactamase superfamily BA953_21445 SM00387 Histidine kinase-like ATPases BA953_21450 SM00448 cheY-homologous receiver domain BA953_21450 SM00862 Transcriptional regulatory protein, C terminal BA953_21460 SM00020 Trypsin-like serine protease BA953_21520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_21520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_21530 SM00344 helix_turn_helix ASNC type BA953_21540 SM00387 Histidine kinase-like ATPases BA953_21540 SM00388 His Kinase A (phosphoacceptor) domain BA953_21540 SM00448 cheY-homologous receiver domain BA953_21560 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BA953_21565 SM01092 CO dehydrogenase flavoprotein C-terminal domain BA953_21570 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_21570 SM00895 BA953_21570 BA953_21590 SM00342 helix_turn_helix, arabinose operon control protein BA953_21590 SM00871 Bacterial transcription activator, effector binding domain BA953_21600 SM00357 Cold shock protein domain BA953_21645 SM00342 helix_turn_helix, arabinose operon control protein BA953_21650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_21650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_21650 SM01049 BA953_21650 BA953_21690 SM00421 helix_turn_helix, Lux Regulon BA953_21705 SM00642 Alpha-amylase domain BA953_21715 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BA953_21770 SM00342 helix_turn_helix, arabinose operon control protein BA953_21810 SM00563 Phosphate acyltransferases BA953_21860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_21860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_21890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_21935 SM00872 Alpha mannosidase, middle domain BA953_21940 SM00642 Alpha-amylase domain BA953_21965 SM00382 ATPases associated with a variety of cellular activities BA953_21985 SM01006 Siderophore biosynthesis protein domain BA953_22010 SM00347 helix_turn_helix multiple antibiotic resistance protein BA953_22105 SM00382 ATPases associated with a variety of cellular activities BA953_22205 SM00028 Tetratricopeptide repeats BA953_22265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_22265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_22285 SM00382 ATPases associated with a variety of cellular activities BA953_22290 SM00267 diguanylate cyclase BA953_22325 SM00382 ATPases associated with a variety of cellular activities BA953_22340 SM00671 Sel1-like repeats. BA953_22355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_22355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_22370 SM00587 ZnF_C4 abd HLH domain containing kinases domain BA953_22405 SM00344 helix_turn_helix ASNC type BA953_22430 SM00347 helix_turn_helix multiple antibiotic resistance protein BA953_22450 SM00388 His Kinase A (phosphoacceptor) domain BA953_22455 SM00448 cheY-homologous receiver domain BA953_22455 SM00862 Transcriptional regulatory protein, C terminal BA953_22470 SM00387 Histidine kinase-like ATPases BA953_22470 SM00388 His Kinase A (phosphoacceptor) domain BA953_22470 SM00448 cheY-homologous receiver domain BA953_22495 SM00342 helix_turn_helix, arabinose operon control protein BA953_22530 SM00267 diguanylate cyclase BA953_22555 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_22555 SM00382 ATPases associated with a variety of cellular activities BA953_22560 SM00342 helix_turn_helix, arabinose operon control protein BA953_22565 SM00450 Rhodanese Homology Domain BA953_22610 SM00062 Bacterial periplasmic substrate-binding proteins BA953_22640 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA953_22655 SM00387 Histidine kinase-like ATPases BA953_22660 SM00448 cheY-homologous receiver domain BA953_22775 SM00530 Helix-turn-helix XRE-family like proteins BA953_22790 SM00382 ATPases associated with a variety of cellular activities BA953_22800 SM00342 helix_turn_helix, arabinose operon control protein BA953_22820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_22820 SM00387 Histidine kinase-like ATPases BA953_22820 SM01049 BA953_22820 BA953_22845 SM00382 ATPases associated with a variety of cellular activities BA953_22920 SM00530 Helix-turn-helix XRE-family like proteins BA953_22935 SM00642 Alpha-amylase domain BA953_22950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_22950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_22950 SM01049 BA953_22950 BA953_22955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_22955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_22975 SM00422 helix_turn_helix, mercury resistance BA953_22985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_22985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_22995 SM00422 helix_turn_helix, mercury resistance BA953_23025 SM00347 helix_turn_helix multiple antibiotic resistance protein BA953_23030 SM00642 Alpha-amylase domain BA953_23060 SM00342 helix_turn_helix, arabinose operon control protein BA953_23060 SM00871 Bacterial transcription activator, effector binding domain BA953_23080 SM00342 helix_turn_helix, arabinose operon control protein BA953_23085 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_23095 SM00344 helix_turn_helix ASNC type BA953_23105 SM01034 Sensors of blue-light using FAD BA953_23110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_23110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_23150 SM00267 diguanylate cyclase BA953_23175 SM00422 helix_turn_helix, mercury resistance BA953_23185 SM00448 cheY-homologous receiver domain BA953_23190 SM00052 Putative diguanylate phosphodiesterase BA953_23190 SM00421 helix_turn_helix, Lux Regulon BA953_23195 SM00387 Histidine kinase-like ATPases BA953_23195 SM00388 His Kinase A (phosphoacceptor) domain BA953_23195 SM00448 cheY-homologous receiver domain BA953_23200 SM00062 Bacterial periplasmic substrate-binding proteins BA953_23260 SM00448 cheY-homologous receiver domain BA953_23260 SM00862 Transcriptional regulatory protein, C terminal BA953_23265 SM00387 Histidine kinase-like ATPases BA953_23265 SM00388 His Kinase A (phosphoacceptor) domain BA953_23285 SM00387 Histidine kinase-like ATPases BA953_23285 SM00388 His Kinase A (phosphoacceptor) domain BA953_23285 SM00448 cheY-homologous receiver domain BA953_23310 SM00382 ATPases associated with a variety of cellular activities BA953_23340 SM00422 helix_turn_helix, mercury resistance BA953_23350 SM00450 Rhodanese Homology Domain BA953_23355 SM01266 BA953_23355 BA953_23370 SM01130 BA953_23370 BA953_23405 SM01130 BA953_23405 BA953_23410 SM00345 helix_turn_helix gluconate operon transcriptional repressor BA953_23410 SM00895 BA953_23410 BA953_23425 SM00642 Alpha-amylase domain BA953_23460 SM00829 Enoylreductase BA953_23470 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_23470 SM00267 diguanylate cyclase BA953_23475 SM00062 Bacterial periplasmic substrate-binding proteins BA953_23485 SM01022 BA953_23485 BA953_23490 SM00487 DEAD-like helicases superfamily BA953_23490 SM00490 helicase superfamily c-terminal domain BA953_23495 SM00346 helix_turn_helix isocitrate lyase regulation BA953_23515 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BA953_23535 SM00354 helix_turn _helix lactose operon repressor BA953_23555 SM00267 diguanylate cyclase BA953_23555 SM01079 BA953_23555 BA953_23575 SM00248 ankyrin repeats BA953_23590 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA953_23590 SM00448 cheY-homologous receiver domain BA953_23595 SM00387 Histidine kinase-like ATPases BA953_23595 SM00388 His Kinase A (phosphoacceptor) domain BA953_23615 SM00382 ATPases associated with a variety of cellular activities BA953_23620 SM01266 BA953_23620 BA953_23665 SM00135 Low-density lipoprotein-receptor YWTD domain BA953_23680 SM00862 Transcriptional regulatory protein, C terminal BA953_23720 SM00829 Enoylreductase BA953_23755 SM00344 helix_turn_helix ASNC type BA953_23765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_23765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_23770 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BA953_23810 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_23825 SM00382 ATPases associated with a variety of cellular activities BA953_23845 SM01350 BA953_23845 BA953_23860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_23870 SM00481 DNA polymerase alpha chain like domain BA953_23885 SM00387 Histidine kinase-like ATPases BA953_23890 SM00421 helix_turn_helix, Lux Regulon BA953_23890 SM00448 cheY-homologous receiver domain BA953_23920 SM00421 helix_turn_helix, Lux Regulon BA953_23925 SM00420 helix_turn_helix, Deoxyribose operon repressor BA953_23925 SM01134 BA953_23925 BA953_23930 SM00267 diguanylate cyclase BA953_23940 SM00342 helix_turn_helix, arabinose operon control protein BA953_23960 SM00642 Alpha-amylase domain BA953_23995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_24020 SM00091 PAS domain BA953_24020 SM00387 Histidine kinase-like ATPases BA953_24020 SM00388 His Kinase A (phosphoacceptor) domain BA953_24020 SM00448 cheY-homologous receiver domain BA953_24025 SM00448 cheY-homologous receiver domain BA953_24025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BA953_24045 SM01240 BA953_24045 BA953_24050 SM00636 BA953_24050 BA953_24085 SM00862 Transcriptional regulatory protein, C terminal BA953_24135 SM00382 ATPases associated with a variety of cellular activities BA953_24170 SM00382 ATPases associated with a variety of cellular activities BA953_24190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_24190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_24190 SM01049 BA953_24190 BA953_24200 SM00267 diguanylate cyclase BA953_24220 SM00382 ATPases associated with a variety of cellular activities BA953_24230 SM00267 diguanylate cyclase BA953_24235 SM00052 Putative diguanylate phosphodiesterase BA953_24235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BA953_24235 SM00267 diguanylate cyclase BA953_24240 SM00448 cheY-homologous receiver domain BA953_24250 SM00421 helix_turn_helix, Lux Regulon BA953_24250 SM00448 cheY-homologous receiver domain BA953_24280 SM00382 ATPases associated with a variety of cellular activities BA953_24305 SM00990 BA953_24305 BA953_24320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BA953_24320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BA953_24325 SM00062 Bacterial periplasmic substrate-binding proteins BA953_24325 SM00267 diguanylate cyclase BA953_24360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BA953_24360 SM00382 ATPases associated with a variety of cellular activities BA953_24365 SM00382 ATPases associated with a variety of cellular activities BA953_24365 SM01086 C-terminal, D2-small domain, of ClpB protein BA953_24400 SM00220 Serine/Threonine protein kinases, catalytic domain BA953_24435 SM00344 helix_turn_helix ASNC type BA953_24455 SM00240 Forkhead associated domain BA953_24475 SM01038 Beta galactosidase small chain BA953_24485 SM00354 helix_turn _helix lactose operon repressor BA953_24510 SM00822 BA953_24510 BA953_24545 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BA953_24570 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BA953_24630 SM00062 Bacterial periplasmic substrate-binding proteins BA953_24695 SM00387 Histidine kinase-like ATPases BA953_24695 SM00388 His Kinase A (phosphoacceptor) domain BA953_24695 SM00448 cheY-homologous receiver domain BA953_24705 SM00857 Resolvase, N terminal domain BA953_24725 SM00244 prohibitin homologues BA953_24730 SM00244 prohibitin homologues BA953_24750 SM00247 Beta/gamma crystallins BA953_24830 SM00862 Transcriptional regulatory protein, C terminal BA953_24835 SM00862 Transcriptional regulatory protein, C terminal BA953_24890 SM00999 Aerolysin toxin